Query 007975
Match_columns 583
No_of_seqs 464 out of 4222
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 15:05:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007975.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007975hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 1.2E-78 4E-83 661.2 39.1 435 55-582 39-500 (502)
2 3hyw_A Sulfide-quinone reducta 100.0 3.5E-55 1.2E-59 469.0 23.5 398 58-581 2-423 (430)
3 3sx6_A Sulfide-quinone reducta 100.0 7.5E-44 2.6E-48 382.1 30.7 374 58-562 4-407 (437)
4 3vrd_B FCCB subunit, flavocyto 100.0 4.1E-42 1.4E-46 364.5 26.8 350 58-553 2-386 (401)
5 3h28_A Sulfide-quinone reducta 100.0 1.3E-41 4.5E-46 364.0 27.4 387 58-577 2-412 (430)
6 4eqs_A Coenzyme A disulfide re 100.0 2E-41 6.9E-46 362.8 27.7 275 59-379 1-282 (437)
7 3klj_A NAD(FAD)-dependent dehy 100.0 1.4E-41 4.7E-46 357.9 25.1 261 56-377 7-269 (385)
8 1xhc_A NADH oxidase /nitrite r 100.0 2.8E-40 9.7E-45 346.0 30.3 263 58-377 8-272 (367)
9 3h8l_A NADH oxidase; membrane 100.0 1.1E-39 3.6E-44 346.9 25.9 280 58-377 1-311 (409)
10 3lxd_A FAD-dependent pyridine 100.0 4E-38 1.4E-42 335.5 33.8 274 57-378 8-290 (415)
11 3ef6_A Toluene 1,2-dioxygenase 100.0 7.5E-39 2.6E-43 340.4 28.1 271 58-378 2-280 (410)
12 3fg2_P Putative rubredoxin red 100.0 6.1E-38 2.1E-42 332.8 32.8 272 58-378 1-280 (404)
13 2gqw_A Ferredoxin reductase; f 100.0 3.2E-38 1.1E-42 335.2 25.4 265 57-378 6-278 (408)
14 3ntd_A FAD-dependent pyridine 100.0 2.4E-37 8.1E-42 342.5 32.3 279 58-378 1-308 (565)
15 3ics_A Coenzyme A-disulfide re 100.0 1.9E-37 6.7E-42 344.7 31.0 282 53-378 31-323 (588)
16 3iwa_A FAD-dependent pyridine 100.0 1.8E-37 6.2E-42 335.8 26.5 280 58-378 3-299 (472)
17 1q1r_A Putidaredoxin reductase 100.0 4.9E-37 1.7E-41 328.4 28.7 272 58-378 4-289 (431)
18 2cdu_A NADPH oxidase; flavoenz 100.0 7.4E-37 2.5E-41 329.3 28.6 276 59-378 1-287 (452)
19 2bc0_A NADH oxidase; flavoprot 100.0 9.5E-37 3.2E-41 331.6 27.9 276 57-378 34-331 (490)
20 3kd9_A Coenzyme A disulfide re 100.0 8.9E-37 3E-41 328.3 26.0 274 57-378 2-285 (449)
21 3oc4_A Oxidoreductase, pyridin 100.0 4.8E-37 1.6E-41 330.7 21.6 273 59-378 3-284 (452)
22 3cgb_A Pyridine nucleotide-dis 100.0 3.6E-36 1.2E-40 326.2 28.1 279 58-378 36-323 (480)
23 2v3a_A Rubredoxin reductase; a 100.0 1.3E-35 4.6E-40 312.7 29.1 268 58-377 4-281 (384)
24 1nhp_A NADH peroxidase; oxidor 100.0 7.4E-36 2.5E-40 321.0 26.4 277 59-378 1-286 (447)
25 3l8k_A Dihydrolipoyl dehydroge 100.0 8.4E-36 2.9E-40 322.2 20.9 267 58-376 4-311 (466)
26 1m6i_A Programmed cell death p 100.0 2.3E-35 8E-40 320.6 24.5 276 56-378 9-323 (493)
27 2zbw_A Thioredoxin reductase; 100.0 3.8E-35 1.3E-39 302.8 24.9 267 57-377 4-291 (335)
28 2qae_A Lipoamide, dihydrolipoy 100.0 1.4E-35 5E-40 320.6 22.5 270 58-376 2-317 (468)
29 3f8d_A Thioredoxin reductase ( 100.0 4.1E-35 1.4E-39 300.1 24.6 264 57-377 14-291 (323)
30 1zmd_A Dihydrolipoyl dehydroge 100.0 1.3E-35 4.3E-40 321.6 21.0 269 57-376 5-323 (474)
31 1mo9_A ORF3; nucleotide bindin 100.0 5E-35 1.7E-39 320.4 25.5 267 56-376 41-356 (523)
32 3urh_A Dihydrolipoyl dehydroge 100.0 8.1E-35 2.8E-39 316.6 23.9 274 54-376 21-341 (491)
33 2a8x_A Dihydrolipoyl dehydroge 100.0 2.9E-35 9.9E-40 317.9 19.8 268 58-376 3-312 (464)
34 1dxl_A Dihydrolipoamide dehydr 100.0 4.8E-35 1.6E-39 316.7 20.8 271 57-376 5-320 (470)
35 1ebd_A E3BD, dihydrolipoamide 100.0 4.6E-35 1.6E-39 315.5 20.3 267 58-376 3-311 (455)
36 1zk7_A HGII, reductase, mercur 100.0 3.6E-34 1.2E-38 309.5 27.0 265 57-376 3-312 (467)
37 2q7v_A Thioredoxin reductase; 100.0 3E-34 1E-38 295.0 23.5 263 57-376 7-287 (325)
38 3qfa_A Thioredoxin reductase 1 100.0 2.2E-34 7.4E-39 314.9 23.7 270 56-376 30-357 (519)
39 3fbs_A Oxidoreductase; structu 100.0 1E-34 3.4E-39 293.8 19.0 258 58-376 2-268 (297)
40 1ges_A Glutathione reductase; 100.0 1.7E-34 5.9E-39 310.5 21.8 259 58-376 4-306 (450)
41 3itj_A Thioredoxin reductase 1 100.0 7.3E-35 2.5E-39 300.4 18.0 274 54-376 18-310 (338)
42 3r9u_A Thioredoxin reductase; 100.0 1.7E-34 5.8E-39 294.7 19.9 262 57-376 3-287 (315)
43 1v59_A Dihydrolipoamide dehydr 100.0 2.1E-34 7.1E-39 312.4 21.8 270 58-376 5-328 (478)
44 1onf_A GR, grase, glutathione 100.0 2.4E-34 8.2E-39 313.4 21.6 271 58-377 2-316 (500)
45 2wpf_A Trypanothione reductase 100.0 2E-34 6.9E-39 313.4 21.0 272 58-376 7-333 (495)
46 4gcm_A TRXR, thioredoxin reduc 100.0 6.5E-34 2.2E-38 290.9 23.4 265 57-376 5-281 (312)
47 2hqm_A GR, grase, glutathione 100.0 3.2E-34 1.1E-38 310.8 22.3 265 57-376 10-325 (479)
48 1fec_A Trypanothione reductase 100.0 3.1E-34 1.1E-38 311.6 22.2 270 57-376 2-329 (490)
49 3lzw_A Ferredoxin--NADP reduct 100.0 1.7E-34 5.7E-39 297.0 18.9 261 58-377 7-289 (332)
50 1ojt_A Surface protein; redox- 100.0 3.4E-34 1.2E-38 310.9 22.1 272 58-376 6-327 (482)
51 2eq6_A Pyruvate dehydrogenase 100.0 2.4E-34 8.1E-39 310.6 20.4 263 58-376 6-312 (464)
52 2q0l_A TRXR, thioredoxin reduc 100.0 9E-34 3.1E-38 289.4 23.3 264 58-376 1-284 (311)
53 3cty_A Thioredoxin reductase; 100.0 7.1E-34 2.4E-38 291.5 22.5 264 57-376 15-291 (319)
54 3dgz_A Thioredoxin reductase 2 100.0 9E-34 3.1E-38 308.1 24.0 269 57-376 5-329 (488)
55 2r9z_A Glutathione amide reduc 100.0 1.7E-33 5.9E-38 303.7 25.5 261 57-376 3-305 (463)
56 3ab1_A Ferredoxin--NADP reduct 100.0 7.1E-34 2.4E-38 296.6 21.5 264 57-377 13-302 (360)
57 1trb_A Thioredoxin reductase; 100.0 1.2E-33 4E-38 289.6 21.9 266 57-377 4-290 (320)
58 3dk9_A Grase, GR, glutathione 100.0 3.5E-34 1.2E-38 310.5 18.8 266 56-376 18-334 (478)
59 1fl2_A Alkyl hydroperoxide red 100.0 2E-33 6.9E-38 286.7 23.3 261 59-377 2-281 (310)
60 1xdi_A RV3303C-LPDA; reductase 100.0 3.8E-34 1.3E-38 311.8 17.4 267 58-376 2-320 (499)
61 1lvl_A Dihydrolipoamide dehydr 100.0 1.1E-33 3.7E-38 304.9 19.9 260 58-376 5-308 (458)
62 4dna_A Probable glutathione re 100.0 2.4E-33 8.1E-38 302.8 20.8 261 58-376 5-309 (463)
63 3dgh_A TRXR-1, thioredoxin red 100.0 8E-33 2.7E-37 300.3 24.0 268 56-376 7-329 (483)
64 4a5l_A Thioredoxin reductase; 100.0 4.6E-33 1.6E-37 284.4 20.4 269 57-377 3-288 (314)
65 2a87_A TRXR, TR, thioredoxin r 100.0 8.2E-33 2.8E-37 285.7 21.7 265 56-376 12-291 (335)
66 2yqu_A 2-oxoglutarate dehydrog 100.0 1.4E-33 4.7E-38 304.0 16.1 263 59-376 2-305 (455)
67 1vdc_A NTR, NADPH dependent th 100.0 3.6E-33 1.2E-37 287.8 17.8 271 57-376 7-298 (333)
68 3lad_A Dihydrolipoamide dehydr 100.0 1.2E-32 4.1E-37 298.4 21.6 270 57-376 2-321 (476)
69 3o0h_A Glutathione reductase; 100.0 1.3E-32 4.3E-37 298.7 20.4 260 58-376 26-329 (484)
70 4b1b_A TRXR, thioredoxin reduc 100.0 6.9E-32 2.4E-36 294.4 25.7 267 58-376 42-361 (542)
71 3ic9_A Dihydrolipoamide dehydr 100.0 6.1E-33 2.1E-37 301.6 16.6 265 58-376 8-316 (492)
72 4a9w_A Monooxygenase; baeyer-v 100.0 2.9E-32 1E-36 282.7 20.2 262 58-374 3-323 (357)
73 2x8g_A Thioredoxin glutathione 100.0 4E-32 1.4E-36 302.4 21.1 270 56-376 105-436 (598)
74 4fk1_A Putative thioredoxin re 100.0 3.6E-32 1.2E-36 277.1 18.7 262 55-376 3-275 (304)
75 2vdc_G Glutamate synthase [NAD 100.0 5.5E-32 1.9E-36 290.4 19.1 276 56-376 120-420 (456)
76 1hyu_A AHPF, alkyl hydroperoxi 100.0 3.9E-31 1.3E-35 289.2 25.8 264 57-377 211-492 (521)
77 3d1c_A Flavin-containing putat 100.0 1.6E-31 5.3E-36 279.4 21.1 267 57-378 3-313 (369)
78 3k30_A Histamine dehydrogenase 100.0 2.2E-31 7.6E-36 300.7 16.1 290 17-376 346-652 (690)
79 1o94_A Tmadh, trimethylamine d 100.0 5.6E-31 1.9E-35 298.7 14.7 300 16-376 342-677 (729)
80 1lqt_A FPRA; NADP+ derivative, 100.0 1E-30 3.5E-35 280.8 14.2 286 57-376 2-362 (456)
81 3s5w_A L-ornithine 5-monooxyge 100.0 1.4E-29 4.9E-34 273.1 22.0 283 57-377 29-421 (463)
82 1ps9_A 2,4-dienoyl-COA reducta 100.0 1.3E-29 4.5E-34 285.4 16.8 276 37-377 352-652 (671)
83 1cjc_A Protein (adrenodoxin re 100.0 1.1E-29 3.7E-34 273.2 14.7 285 57-376 5-370 (460)
84 2xve_A Flavin-containing monoo 100.0 1.8E-28 6.1E-33 264.4 21.0 253 59-376 3-318 (464)
85 1gte_A Dihydropyrimidine dehyd 100.0 1.2E-28 3.9E-33 289.0 20.9 276 57-376 186-484 (1025)
86 2gag_A Heterotetrameric sarcos 100.0 7.8E-28 2.7E-32 280.1 18.1 269 58-376 128-421 (965)
87 3gwf_A Cyclohexanone monooxyge 99.9 9.2E-28 3.2E-32 262.9 16.7 267 57-376 7-433 (540)
88 2gv8_A Monooxygenase; FMO, FAD 99.9 4.1E-27 1.4E-31 252.8 15.1 254 57-376 5-339 (447)
89 3uox_A Otemo; baeyer-villiger 99.9 1.4E-26 4.8E-31 253.8 13.5 181 56-274 7-223 (545)
90 1y56_A Hypothetical protein PH 99.9 1.7E-26 6E-31 250.7 13.9 239 58-376 108-354 (493)
91 4ap3_A Steroid monooxygenase; 99.9 8.5E-26 2.9E-30 247.8 16.7 176 56-275 19-230 (549)
92 1w4x_A Phenylacetone monooxyge 99.9 1.9E-24 6.4E-29 237.5 18.4 172 57-272 15-221 (542)
93 2ywl_A Thioredoxin reductase r 99.8 3E-20 1E-24 173.8 18.9 127 225-377 3-147 (180)
94 4b63_A L-ornithine N5 monooxyg 99.8 7.4E-18 2.5E-22 183.0 23.9 283 55-374 36-457 (501)
95 2cul_A Glucose-inhibited divis 99.5 8.3E-14 2.8E-18 135.5 16.2 94 225-335 5-125 (232)
96 2e5v_A L-aspartate oxidase; ar 99.5 9.9E-15 3.4E-19 157.2 4.6 257 60-376 1-340 (472)
97 3fpz_A Thiazole biosynthetic e 99.4 5.8E-15 2E-19 151.4 -7.1 228 58-376 65-294 (326)
98 2gqf_A Hypothetical protein HI 99.2 2.1E-12 7.1E-17 136.1 3.5 108 58-175 4-168 (401)
99 3k7m_X 6-hydroxy-L-nicotine ox 99.0 1.7E-09 5.8E-14 114.6 12.9 92 279-376 205-307 (431)
100 1rp0_A ARA6, thiazole biosynth 99.0 3.2E-09 1.1E-13 106.2 14.0 139 224-376 40-244 (284)
101 2ywl_A Thioredoxin reductase r 99.0 9.1E-10 3.1E-14 102.1 7.8 107 58-176 1-111 (180)
102 2cul_A Glucose-inhibited divis 98.9 7E-10 2.4E-14 107.6 6.3 118 57-184 2-134 (232)
103 3ces_A MNMG, tRNA uridine 5-ca 98.8 6.5E-09 2.2E-13 114.2 8.6 116 57-184 27-190 (651)
104 4dgk_A Phytoene dehydrogenase; 98.7 7.9E-09 2.7E-13 111.8 7.1 53 278-332 221-275 (501)
105 3alj_A 2-methyl-3-hydroxypyrid 98.7 2.3E-08 7.7E-13 104.2 8.1 107 57-175 10-160 (379)
106 3v76_A Flavoprotein; structura 98.7 1.5E-08 5.2E-13 106.9 6.2 110 56-175 25-187 (417)
107 2zxi_A TRNA uridine 5-carboxym 98.7 2.3E-08 8E-13 109.3 7.7 115 58-184 27-189 (637)
108 2bry_A NEDD9 interacting prote 98.7 9.1E-09 3.1E-13 111.3 3.9 153 163-336 37-231 (497)
109 3dme_A Conserved exported prot 98.6 6.5E-07 2.2E-11 92.1 17.0 65 277-346 149-216 (369)
110 3ka7_A Oxidoreductase; structu 98.6 9.1E-07 3.1E-11 93.3 18.0 52 278-332 196-249 (425)
111 1rp0_A ARA6, thiazole biosynth 98.6 8.9E-08 3E-12 95.7 9.6 119 58-177 39-193 (284)
112 3nrn_A Uncharacterized protein 98.6 4.6E-08 1.6E-12 103.3 7.6 51 277-332 188-240 (421)
113 2gag_B Heterotetrameric sarcos 98.6 2.9E-06 9.8E-11 88.7 20.8 68 262-334 160-229 (405)
114 2bry_A NEDD9 interacting prote 98.6 5E-08 1.7E-12 105.4 7.2 120 56-182 90-237 (497)
115 3pl8_A Pyranose 2-oxidase; sub 98.6 7.7E-09 2.6E-13 114.7 -0.1 39 57-95 45-83 (623)
116 2gf3_A MSOX, monomeric sarcosi 98.6 1.7E-06 5.7E-11 89.9 17.7 76 253-334 126-204 (389)
117 3nlc_A Uncharacterized protein 98.5 9.4E-08 3.2E-12 103.9 8.1 110 56-176 105-278 (549)
118 1ryi_A Glycine oxidase; flavop 98.5 6.3E-08 2.1E-12 100.7 4.5 38 55-92 14-51 (382)
119 2x3n_A Probable FAD-dependent 98.4 2E-07 6.8E-12 97.6 7.4 36 58-93 6-41 (399)
120 3oz2_A Digeranylgeranylglycero 98.4 1.2E-07 4.2E-12 98.5 5.5 39 56-94 2-40 (397)
121 2i0z_A NAD(FAD)-utilizing dehy 98.4 2.3E-07 8E-12 98.9 7.8 110 57-175 25-191 (447)
122 3cp8_A TRNA uridine 5-carboxym 98.4 2.1E-07 7.3E-12 102.1 7.3 117 56-182 19-181 (641)
123 3i3l_A Alkylhalidase CMLS; fla 98.4 3.7E-06 1.3E-10 92.5 17.1 37 56-92 21-57 (591)
124 3dje_A Fructosyl amine: oxygen 98.4 2.9E-06 9.9E-11 89.9 15.5 56 278-335 161-221 (438)
125 3rp8_A Flavoprotein monooxygen 98.4 3E-07 1E-11 96.6 7.8 41 53-93 18-58 (407)
126 3nyc_A D-arginine dehydrogenas 98.4 1.6E-07 5.5E-12 97.3 5.4 37 56-93 7-43 (381)
127 3nix_A Flavoprotein/dehydrogen 98.4 4.5E-07 1.5E-11 95.5 8.5 111 58-175 5-166 (421)
128 3ihg_A RDME; flavoenzyme, anth 98.4 6.4E-07 2.2E-11 97.7 9.7 36 57-92 4-39 (535)
129 3qj4_A Renalase; FAD/NAD(P)-bi 98.4 3.3E-07 1.1E-11 93.8 7.0 36 58-93 1-39 (342)
130 1y56_B Sarcosine oxidase; dehy 98.4 3.5E-07 1.2E-11 95.0 7.0 35 57-91 4-38 (382)
131 1yvv_A Amine oxidase, flavin-c 98.3 5E-07 1.7E-11 91.9 7.1 36 58-93 2-37 (336)
132 3fmw_A Oxygenase; mithramycin, 98.3 3.4E-07 1.2E-11 100.5 6.0 111 57-175 48-207 (570)
133 2xdo_A TETX2 protein; tetracyc 98.3 7.5E-07 2.6E-11 93.3 8.3 37 57-93 25-61 (398)
134 2yqu_A 2-oxoglutarate dehydrog 98.3 7.2E-07 2.5E-11 95.2 8.2 102 58-179 167-268 (455)
135 2vou_A 2,6-dihydroxypyridine h 98.3 9.9E-07 3.4E-11 92.3 9.1 37 56-92 3-39 (397)
136 3ps9_A TRNA 5-methylaminomethy 98.3 1E-06 3.5E-11 98.9 9.6 36 57-92 271-306 (676)
137 3cgv_A Geranylgeranyl reductas 98.3 4E-07 1.4E-11 94.9 5.8 111 57-175 3-162 (397)
138 3e1t_A Halogenase; flavoprotei 98.3 1.1E-06 3.9E-11 95.2 9.3 113 57-176 6-173 (512)
139 3pvc_A TRNA 5-methylaminomethy 98.3 1.2E-05 4E-10 90.5 17.3 57 277-336 411-470 (689)
140 3da1_A Glycerol-3-phosphate de 98.3 6.4E-06 2.2E-10 90.2 14.7 57 277-333 169-230 (561)
141 2gqw_A Ferredoxin reductase; f 98.3 1.4E-06 4.8E-11 91.6 9.0 97 58-177 145-241 (408)
142 2uzz_A N-methyl-L-tryptophan o 98.3 3.3E-07 1.1E-11 94.8 4.1 35 58-92 2-36 (372)
143 2qa1_A PGAE, polyketide oxygen 98.3 1.7E-06 5.7E-11 93.6 9.7 115 55-175 8-165 (500)
144 1y0p_A Fumarate reductase flav 98.3 1.3E-06 4.6E-11 95.9 9.2 37 58-94 126-162 (571)
145 2eq6_A Pyruvate dehydrogenase 98.3 1.6E-06 5.6E-11 92.7 9.5 105 58-179 169-275 (464)
146 3atr_A Conserved archaeal prot 98.3 9.7E-07 3.3E-11 94.2 7.6 112 58-176 6-163 (453)
147 2v3a_A Rubredoxin reductase; a 98.3 2E-06 7E-11 89.5 9.6 101 58-177 145-245 (384)
148 4a9w_A Monooxygenase; baeyer-v 98.3 4.8E-06 1.6E-10 85.0 12.2 96 224-337 4-134 (357)
149 2oln_A NIKD protein; flavoprot 98.2 8.8E-07 3E-11 92.6 6.2 35 58-92 4-38 (397)
150 1ebd_A E3BD, dihydrolipoamide 98.2 2.3E-06 7.8E-11 91.3 9.2 104 58-178 170-273 (455)
151 1nhp_A NADH peroxidase; oxidor 98.2 1.8E-06 6E-11 92.0 8.3 100 57-178 148-249 (447)
152 2qa2_A CABE, polyketide oxygen 98.2 2.5E-06 8.7E-11 92.1 9.7 113 57-175 11-166 (499)
153 1pj5_A N,N-dimethylglycine oxi 98.2 8E-06 2.7E-10 93.8 14.0 55 277-334 150-206 (830)
154 1k0i_A P-hydroxybenzoate hydro 98.2 9.6E-07 3.3E-11 92.2 5.8 35 58-92 2-36 (394)
155 3kkj_A Amine oxidase, flavin-c 98.2 6.3E-07 2.2E-11 87.0 3.7 39 58-96 2-40 (336)
156 1qo8_A Flavocytochrome C3 fuma 98.2 1.8E-06 6E-11 94.9 7.7 38 57-94 120-157 (566)
157 3lxd_A FAD-dependent pyridine 98.2 3.7E-06 1.3E-10 88.5 9.8 99 58-177 152-253 (415)
158 1lvl_A Dihydrolipoamide dehydr 98.2 1.5E-06 5E-11 92.9 6.8 102 58-179 171-272 (458)
159 3alj_A 2-methyl-3-hydroxypyrid 98.2 1.4E-05 4.9E-10 82.8 14.2 93 224-334 12-159 (379)
160 3nlc_A Uncharacterized protein 98.2 8.7E-06 3E-10 88.4 12.6 108 224-348 108-289 (549)
161 3lzw_A Ferredoxin--NADP reduct 98.2 6.3E-06 2.2E-10 83.3 10.7 92 224-333 8-121 (332)
162 3ef6_A Toluene 1,2-dioxygenase 98.2 1.8E-06 6.1E-11 90.8 6.7 99 58-177 143-243 (410)
163 4eqs_A Coenzyme A disulfide re 98.2 4.3E-06 1.5E-10 88.7 9.7 97 58-178 147-243 (437)
164 1ges_A Glutathione reductase; 98.1 3E-06 1E-10 90.3 8.0 99 58-178 167-268 (450)
165 3f8d_A Thioredoxin reductase ( 98.1 1.1E-05 3.9E-10 81.0 11.9 94 224-335 16-125 (323)
166 3axb_A Putative oxidoreductase 98.1 3.6E-06 1.2E-10 89.5 8.4 35 57-91 22-57 (448)
167 3itj_A Thioredoxin reductase 1 98.1 1E-05 3.5E-10 82.0 11.3 98 221-335 20-142 (338)
168 2xve_A Flavin-containing monoo 98.1 1.7E-05 5.7E-10 84.8 13.3 104 224-338 3-169 (464)
169 3c4n_A Uncharacterized protein 98.1 1.1E-06 3.7E-11 92.4 3.9 35 57-91 35-71 (405)
170 3v76_A Flavoprotein; structura 98.1 1.2E-05 4.2E-10 84.5 12.1 96 224-337 28-189 (417)
171 1zmd_A Dihydrolipoyl dehydroge 98.1 4.9E-06 1.7E-10 89.2 8.9 105 58-178 178-285 (474)
172 2zbw_A Thioredoxin reductase; 98.1 1.8E-05 6.1E-10 80.3 12.5 94 224-334 6-120 (335)
173 1v59_A Dihydrolipoamide dehydr 98.1 5.5E-06 1.9E-10 88.9 9.0 104 58-178 183-290 (478)
174 1onf_A GR, grase, glutathione 98.1 7.6E-06 2.6E-10 88.4 10.2 98 58-177 176-277 (500)
175 3fg2_P Putative rubredoxin red 98.1 5.3E-06 1.8E-10 87.0 8.7 99 58-177 142-243 (404)
176 3fbs_A Oxidoreductase; structu 98.1 6.8E-06 2.3E-10 81.7 9.0 89 57-177 140-228 (297)
177 3h8l_A NADH oxidase; membrane 98.1 4.1E-06 1.4E-10 88.0 7.6 100 224-336 2-114 (409)
178 4b1b_A TRXR, thioredoxin reduc 98.1 5.8E-06 2E-10 89.9 8.8 101 57-178 222-322 (542)
179 1xhc_A NADH oxidase /nitrite r 98.1 3.3E-06 1.1E-10 87.4 6.6 93 59-177 144-236 (367)
180 1q1r_A Putidaredoxin reductase 98.1 5.6E-06 1.9E-10 87.7 8.4 99 58-177 149-252 (431)
181 3c96_A Flavin-containing monoo 98.1 4.8E-06 1.6E-10 87.5 7.8 37 57-93 3-40 (410)
182 2a8x_A Dihydrolipoyl dehydroge 98.1 5.2E-06 1.8E-10 88.7 8.0 101 58-178 171-274 (464)
183 1ojt_A Surface protein; redox- 98.1 3.2E-06 1.1E-10 90.9 6.4 102 58-177 185-288 (482)
184 2aqj_A Tryptophan halogenase, 98.1 7.1E-06 2.4E-10 89.5 9.1 35 57-91 4-41 (538)
185 3oc4_A Oxidoreductase, pyridin 98.1 1E-05 3.5E-10 86.2 10.1 102 58-179 147-248 (452)
186 3hyw_A Sulfide-quinone reducta 98.1 2E-06 6.8E-11 91.1 4.5 95 224-334 3-108 (430)
187 1trb_A Thioredoxin reductase; 98.1 1.2E-05 3.9E-10 81.1 9.9 103 58-178 145-250 (320)
188 3klj_A NAD(FAD)-dependent dehy 98.1 6.3E-06 2.2E-10 85.9 8.1 94 225-335 11-116 (385)
189 3ics_A Coenzyme A-disulfide re 98.1 6.5E-06 2.2E-10 90.8 8.6 98 58-177 187-284 (588)
190 3sx6_A Sulfide-quinone reducta 98.0 6.2E-06 2.1E-10 87.5 8.1 97 224-335 5-112 (437)
191 3d1c_A Flavin-containing putat 98.0 2.8E-05 9.6E-10 80.0 12.9 96 224-337 5-145 (369)
192 2cdu_A NADPH oxidase; flavoenz 98.0 1.2E-05 4E-10 85.7 10.3 101 58-178 149-250 (452)
193 2bc0_A NADH oxidase; flavoprot 98.0 7.8E-06 2.7E-10 88.1 8.9 100 57-178 193-294 (490)
194 3vrd_B FCCB subunit, flavocyto 98.0 4.3E-06 1.5E-10 87.5 6.7 97 223-335 2-108 (401)
195 1dxl_A Dihydrolipoamide dehydr 98.0 4.8E-06 1.6E-10 89.2 7.0 104 58-178 177-282 (470)
196 3ab1_A Ferredoxin--NADP reduct 98.0 2.1E-05 7.2E-10 80.8 11.5 94 224-334 15-130 (360)
197 2gmh_A Electron transfer flavo 98.0 4.9E-06 1.7E-10 91.6 7.0 38 57-94 34-77 (584)
198 3cgb_A Pyridine nucleotide-dis 98.0 6.7E-06 2.3E-10 88.3 8.0 101 57-178 185-285 (480)
199 2r9z_A Glutathione amide reduc 98.0 7.5E-06 2.6E-10 87.5 8.3 102 58-178 166-267 (463)
200 2wpf_A Trypanothione reductase 98.0 7.9E-06 2.7E-10 88.1 8.4 98 58-177 191-294 (495)
201 2hqm_A GR, grase, glutathione 98.0 6.4E-06 2.2E-10 88.5 7.6 99 58-177 185-287 (479)
202 1fec_A Trypanothione reductase 98.0 7E-06 2.4E-10 88.4 7.9 99 58-178 187-291 (490)
203 3cty_A Thioredoxin reductase; 98.0 3E-05 1E-09 78.1 12.1 97 58-177 155-254 (319)
204 1d4d_A Flavocytochrome C fumar 98.0 1.4E-05 4.8E-10 87.8 10.3 37 58-94 126-162 (572)
205 1fl2_A Alkyl hydroperoxide red 98.0 2.5E-05 8.6E-10 78.3 11.3 94 225-335 3-115 (310)
206 2qae_A Lipoamide, dihydrolipoy 98.0 8.5E-06 2.9E-10 87.2 8.2 103 58-178 174-279 (468)
207 2qcu_A Aerobic glycerol-3-phos 98.0 8.4E-06 2.9E-10 88.0 8.1 35 57-91 2-36 (501)
208 2gqf_A Hypothetical protein HI 98.0 3.5E-05 1.2E-09 80.7 12.5 96 225-338 6-171 (401)
209 1zk7_A HGII, reductase, mercur 98.0 8.4E-06 2.9E-10 87.2 7.8 99 58-178 176-274 (467)
210 2dkh_A 3-hydroxybenzoate hydro 98.0 1.8E-05 6.1E-10 88.1 10.6 36 58-93 32-68 (639)
211 2q7v_A Thioredoxin reductase; 98.0 3.3E-05 1.1E-09 78.1 11.5 97 58-177 152-251 (325)
212 3lad_A Dihydrolipoamide dehydr 98.0 1.6E-05 5.4E-10 85.3 9.5 103 57-178 179-283 (476)
213 1vdc_A NTR, NADPH dependent th 98.0 3.5E-05 1.2E-09 78.0 11.7 99 57-178 158-262 (333)
214 4hb9_A Similarities with proba 98.0 1.1E-05 3.9E-10 84.0 8.1 35 59-93 2-36 (412)
215 3kd9_A Coenzyme A disulfide re 98.0 2.1E-05 7.1E-10 83.7 10.2 97 224-334 4-113 (449)
216 1xdi_A RV3303C-LPDA; reductase 98.0 9.9E-06 3.4E-10 87.4 7.6 101 58-178 182-282 (499)
217 2gv8_A Monooxygenase; FMO, FAD 98.0 2.8E-05 9.6E-10 82.6 11.0 101 224-338 7-180 (447)
218 3ic9_A Dihydrolipoamide dehydr 97.9 1.4E-05 4.8E-10 86.1 8.5 105 58-179 174-278 (492)
219 4at0_A 3-ketosteroid-delta4-5a 97.9 2E-05 7E-10 85.2 9.7 38 57-94 40-77 (510)
220 3r9u_A Thioredoxin reductase; 97.9 5.2E-05 1.8E-09 75.9 12.1 92 224-334 5-117 (315)
221 3iwa_A FAD-dependent pyridine 97.9 1.4E-05 4.9E-10 85.5 8.3 99 58-177 159-260 (472)
222 3urh_A Dihydrolipoyl dehydroge 97.9 1.6E-05 5.4E-10 85.6 8.6 106 57-179 197-304 (491)
223 2a87_A TRXR, TR, thioredoxin r 97.9 4.4E-05 1.5E-09 77.6 11.3 98 58-178 155-255 (335)
224 3dgh_A TRXR-1, thioredoxin red 97.9 2.5E-05 8.6E-10 83.9 9.9 103 58-178 187-292 (483)
225 3ntd_A FAD-dependent pyridine 97.9 2.2E-05 7.5E-10 86.0 9.4 100 58-177 151-269 (565)
226 2q0l_A TRXR, thioredoxin reduc 97.9 8.9E-05 3.1E-09 74.2 13.0 92 225-334 3-113 (311)
227 1mo9_A ORF3; nucleotide bindin 97.9 2.4E-05 8.1E-10 85.0 9.2 100 59-177 215-318 (523)
228 2vdc_G Glutamate synthase [NAD 97.9 1.8E-05 6.1E-10 84.4 7.9 90 221-334 120-218 (456)
229 2e4g_A Tryptophan halogenase; 97.9 2.2E-05 7.6E-10 85.7 8.8 36 57-92 24-62 (550)
230 3jsk_A Cypbp37 protein; octame 97.9 1.9E-05 6.6E-10 80.2 7.6 37 58-94 79-117 (344)
231 2i0z_A NAD(FAD)-utilizing dehy 97.9 0.00015 5E-09 77.1 14.8 98 224-337 27-193 (447)
232 2pyx_A Tryptophan halogenase; 97.9 2.9E-05 1E-09 84.3 9.4 36 57-92 6-53 (526)
233 1m6i_A Programmed cell death p 97.9 2.1E-05 7.1E-10 84.8 8.1 99 58-177 180-284 (493)
234 2r0c_A REBC; flavin adenine di 97.8 2.3E-05 7.8E-10 85.6 8.2 36 58-93 26-61 (549)
235 3o0h_A Glutathione reductase; 97.8 2E-05 7E-10 84.6 7.6 103 57-179 190-292 (484)
236 3dk9_A Grase, GR, glutathione 97.8 3.4E-05 1.2E-09 82.7 9.2 106 58-178 187-296 (478)
237 3dgz_A Thioredoxin reductase 2 97.8 3.8E-05 1.3E-09 82.6 9.4 104 57-178 184-290 (488)
238 3s5w_A L-ornithine 5-monooxyge 97.8 7E-05 2.4E-09 79.8 11.4 101 224-333 31-190 (463)
239 3h28_A Sulfide-quinone reducta 97.8 9.2E-06 3.2E-10 85.9 4.3 96 224-335 3-109 (430)
240 1qo8_A Flavocytochrome C3 fuma 97.8 0.00019 6.6E-09 78.6 14.9 55 280-335 252-312 (566)
241 3qfa_A Thioredoxin reductase 1 97.8 5.1E-05 1.7E-09 82.3 10.0 104 58-179 210-319 (519)
242 2x3n_A Probable FAD-dependent 97.8 8.7E-05 3E-09 77.3 11.4 94 224-334 7-165 (399)
243 3gwf_A Cyclohexanone monooxyge 97.8 0.00011 3.9E-09 79.8 12.6 97 224-337 9-149 (540)
244 1hyu_A AHPF, alkyl hydroperoxi 97.8 0.00012 4.2E-09 79.3 12.7 96 223-335 212-326 (521)
245 1k0i_A P-hydroxybenzoate hydro 97.8 0.00016 5.4E-09 75.2 12.9 97 225-335 4-163 (394)
246 4ap3_A Steroid monooxygenase; 97.8 8.3E-05 2.8E-09 81.1 11.1 94 224-334 22-158 (549)
247 2wdq_A Succinate dehydrogenase 97.8 0.00017 5.9E-09 79.2 13.6 58 277-334 142-205 (588)
248 1chu_A Protein (L-aspartate ox 97.7 9.5E-05 3.3E-09 80.5 10.6 35 58-93 8-42 (540)
249 3uox_A Otemo; baeyer-villiger 97.7 0.00011 3.8E-09 80.0 11.1 97 224-337 10-149 (545)
250 1y0p_A Fumarate reductase flav 97.7 0.00018 6.1E-09 78.9 12.7 56 279-335 256-317 (571)
251 4dna_A Probable glutathione re 97.7 5.6E-05 1.9E-09 80.6 8.5 102 57-179 169-272 (463)
252 1yvv_A Amine oxidase, flavin-c 97.7 0.00025 8.5E-09 71.7 12.9 91 225-332 4-159 (336)
253 3nix_A Flavoprotein/dehydrogen 97.7 0.00018 6.1E-09 75.4 11.8 96 224-334 6-165 (421)
254 4gcm_A TRXR, thioredoxin reduc 97.7 0.0002 6.9E-09 71.8 11.7 94 225-335 8-116 (312)
255 4a5l_A Thioredoxin reductase; 97.7 0.00015 5E-09 72.7 10.6 93 225-335 6-121 (314)
256 4gde_A UDP-galactopyranose mut 97.7 1.4E-05 4.7E-10 86.3 3.0 40 57-96 9-49 (513)
257 2vou_A 2,6-dihydroxypyridine h 97.7 0.00016 5.6E-09 75.3 11.2 100 224-342 6-158 (397)
258 2e1m_A L-glutamate oxidase; L- 97.7 6E-05 2E-09 77.9 7.6 43 56-98 42-85 (376)
259 3atr_A Conserved archaeal prot 97.7 0.00015 5.3E-09 77.0 10.9 96 225-334 8-161 (453)
260 2gjc_A Thiazole biosynthetic e 97.6 7.4E-05 2.5E-09 75.4 7.6 36 59-94 66-103 (326)
261 1kf6_A Fumarate reductase flav 97.6 7.4E-05 2.5E-09 82.4 8.0 34 58-91 5-40 (602)
262 1ryi_A Glycine oxidase; flavop 97.6 0.00015 5.1E-09 74.9 9.8 53 278-334 164-218 (382)
263 1y56_B Sarcosine oxidase; dehy 97.6 0.00021 7.1E-09 73.8 10.8 52 279-334 150-204 (382)
264 3ces_A MNMG, tRNA uridine 5-ca 97.6 0.00026 9E-09 77.7 11.9 93 225-334 30-180 (651)
265 3c96_A Flavin-containing monoo 97.6 0.0003 1E-08 73.6 12.1 102 225-342 6-174 (410)
266 4g6h_A Rotenone-insensitive NA 97.6 7.2E-05 2.5E-09 80.7 7.4 102 59-176 218-333 (502)
267 4fk1_A Putative thioredoxin re 97.6 0.00029 1E-08 70.4 11.4 94 225-335 8-117 (304)
268 1d4d_A Flavocytochrome C fumar 97.6 0.00042 1.4E-08 75.9 13.6 56 279-335 256-317 (572)
269 3nks_A Protoporphyrinogen oxid 97.6 3.6E-05 1.2E-09 82.2 4.8 40 58-97 2-43 (477)
270 3l8k_A Dihydrolipoyl dehydroge 97.6 0.00019 6.4E-09 76.6 10.1 95 225-335 6-144 (466)
271 3cgv_A Geranylgeranyl reductas 97.6 0.00049 1.7E-08 71.2 12.9 97 225-335 6-162 (397)
272 3k30_A Histamine dehydrogenase 97.6 0.00016 5.4E-09 81.2 9.7 103 57-177 522-626 (690)
273 3gyx_A Adenylylsulfate reducta 97.6 0.0007 2.4E-08 75.3 14.6 35 58-92 22-62 (662)
274 1cjc_A Protein (adrenodoxin re 97.5 5.3E-05 1.8E-09 80.8 5.1 90 223-334 6-105 (460)
275 3ihg_A RDME; flavoenzyme, anth 97.5 0.00058 2E-08 74.2 13.4 57 278-334 120-182 (535)
276 3i6d_A Protoporphyrinogen oxid 97.5 2.2E-05 7.7E-10 83.5 2.0 40 57-96 4-49 (470)
277 2bcg_G Secretory pathway GDP d 97.5 4.8E-05 1.7E-09 80.9 4.2 41 57-97 10-50 (453)
278 2b9w_A Putative aminooxidase; 97.5 5.5E-05 1.9E-09 79.5 4.5 41 57-97 5-46 (424)
279 1s3e_A Amine oxidase [flavin-c 97.5 4.7E-05 1.6E-09 82.5 4.0 71 57-127 3-79 (520)
280 1rsg_A FMS1 protein; FAD bindi 97.5 3.6E-05 1.2E-09 83.3 3.0 41 57-97 7-48 (516)
281 3rp8_A Flavoprotein monooxygen 97.5 0.00067 2.3E-08 70.8 12.6 94 222-334 22-180 (407)
282 3ihm_A Styrene monooxygenase A 97.5 4.3E-05 1.5E-09 80.7 3.3 35 57-91 21-55 (430)
283 3oz2_A Digeranylgeranylglycero 97.5 0.00097 3.3E-08 68.6 13.5 95 225-333 6-160 (397)
284 3e1t_A Halogenase; flavoprotei 97.5 0.00056 1.9E-08 73.8 12.0 97 224-335 8-172 (512)
285 3qj4_A Renalase; FAD/NAD(P)-bi 97.5 0.00058 2E-08 69.4 11.3 41 289-332 120-162 (342)
286 1w4x_A Phenylacetone monooxyge 97.5 0.00065 2.2E-08 73.9 12.4 98 224-338 17-157 (542)
287 2jae_A L-amino acid oxidase; o 97.5 8.1E-05 2.8E-09 79.9 5.1 42 56-97 9-50 (489)
288 2zxi_A TRNA uridine 5-carboxym 97.4 0.00079 2.7E-08 73.7 12.9 93 225-334 29-179 (637)
289 2uzz_A N-methyl-L-tryptophan o 97.4 0.00061 2.1E-08 69.9 11.6 54 279-336 150-205 (372)
290 2yg5_A Putrescine oxidase; oxi 97.4 4.8E-05 1.6E-09 80.7 2.8 70 57-126 4-78 (453)
291 1lqt_A FPRA; NADP+ derivative, 97.4 7.9E-05 2.7E-09 79.3 4.3 93 224-334 4-107 (456)
292 2x8g_A Thioredoxin glutathione 97.4 0.00034 1.2E-08 77.1 9.5 101 58-177 286-397 (598)
293 2ivd_A PPO, PPOX, protoporphyr 97.4 8.7E-05 3E-09 79.3 4.5 70 56-125 14-88 (478)
294 1c0p_A D-amino acid oxidase; a 97.4 0.0001 3.5E-09 75.8 4.3 35 57-91 5-39 (363)
295 2qa2_A CABE, polyketide oxygen 97.4 0.0016 5.3E-08 70.1 13.7 98 222-334 11-165 (499)
296 2qa1_A PGAE, polyketide oxygen 97.3 0.0017 5.9E-08 69.8 13.9 97 223-334 11-164 (500)
297 3hdq_A UDP-galactopyranose mut 97.3 0.0001 3.5E-09 76.7 4.1 42 56-97 27-68 (397)
298 1v0j_A UDP-galactopyranose mut 97.3 8.9E-05 3.1E-09 77.5 3.5 40 58-97 7-47 (399)
299 3lov_A Protoporphyrinogen oxid 97.3 0.0001 3.5E-09 78.8 4.0 70 57-126 3-79 (475)
300 1sez_A Protoporphyrinogen oxid 97.3 0.00014 4.7E-09 78.4 4.9 69 57-125 12-85 (504)
301 3fmw_A Oxygenase; mithramycin, 97.3 0.00076 2.6E-08 73.8 10.9 95 225-334 51-206 (570)
302 2oln_A NIKD protein; flavoprot 97.3 0.0029 1E-07 65.5 14.9 50 280-333 155-206 (397)
303 1y56_A Hypothetical protein PH 97.3 0.00025 8.5E-09 76.3 6.7 95 224-334 109-218 (493)
304 1gte_A Dihydropyrimidine dehyd 97.3 0.00017 5.7E-09 84.6 5.6 90 222-333 186-285 (1025)
305 2bi7_A UDP-galactopyranose mut 97.3 0.00015 5.3E-09 75.3 4.7 39 58-96 3-41 (384)
306 3cp8_A TRNA uridine 5-carboxym 97.3 0.0015 5.2E-08 71.6 12.7 94 224-334 22-173 (641)
307 3nyc_A D-arginine dehydrogenas 97.3 0.0017 5.8E-08 66.6 12.6 52 279-334 155-208 (381)
308 3ps9_A TRNA 5-methylaminomethy 97.3 0.0018 6.2E-08 72.4 13.5 54 280-336 419-474 (676)
309 2xdo_A TETX2 protein; tetracyc 97.3 0.0011 3.9E-08 68.8 10.9 95 224-335 27-182 (398)
310 2vvm_A Monoamine oxidase N; FA 97.2 0.00013 4.3E-09 78.5 3.6 53 278-333 255-310 (495)
311 2iid_A L-amino-acid oxidase; f 97.2 0.00016 5.6E-09 77.6 4.3 70 57-126 32-108 (498)
312 2gmh_A Electron transfer flavo 97.2 0.0026 9E-08 69.7 13.9 69 279-348 145-229 (584)
313 1ps9_A 2,4-dienoyl-COA reducta 97.2 0.00084 2.9E-08 75.0 10.0 100 57-177 493-630 (671)
314 2qcu_A Aerobic glycerol-3-phos 97.2 0.0018 6.3E-08 69.6 12.2 56 279-334 150-209 (501)
315 1i8t_A UDP-galactopyranose mut 97.2 0.00017 5.9E-09 74.4 3.9 38 59-96 2-39 (367)
316 3c4a_A Probable tryptophan hyd 97.2 0.00016 5.4E-09 75.0 3.1 35 59-93 1-37 (381)
317 4at0_A 3-ketosteroid-delta4-5a 97.1 0.0035 1.2E-07 67.6 13.7 55 279-335 203-264 (510)
318 4hb9_A Similarities with proba 97.1 0.0035 1.2E-07 64.9 13.3 99 224-341 2-170 (412)
319 2gag_A Heterotetrameric sarcos 97.1 0.00052 1.8E-08 79.8 7.1 95 59-177 285-385 (965)
320 1o94_A Tmadh, trimethylamine d 97.1 0.0007 2.4E-08 76.4 7.5 106 58-177 528-648 (729)
321 3g5s_A Methylenetetrahydrofola 97.0 0.00027 9.4E-09 72.5 3.6 34 58-91 1-34 (443)
322 4dsg_A UDP-galactopyranose mut 97.0 0.00028 9.7E-09 75.6 3.9 41 57-97 8-49 (484)
323 2dkh_A 3-hydroxybenzoate hydro 97.0 0.002 6.8E-08 71.5 10.8 57 278-334 141-210 (639)
324 2weu_A Tryptophan 5-halogenase 97.0 0.0002 6.8E-09 77.3 2.6 53 278-334 173-229 (511)
325 3c4a_A Probable tryptophan hyd 97.0 0.00089 3E-08 69.3 7.3 87 225-335 2-143 (381)
326 1d5t_A Guanine nucleotide diss 97.0 0.00042 1.4E-08 73.2 4.3 41 57-97 5-45 (433)
327 3g3e_A D-amino-acid oxidase; F 97.0 0.00023 7.8E-09 72.7 2.1 33 59-91 1-39 (351)
328 2z3y_A Lysine-specific histone 96.9 0.00058 2E-08 76.2 5.0 41 56-96 105-145 (662)
329 2xag_A Lysine-specific histone 96.9 0.00062 2.1E-08 77.6 5.1 41 56-96 276-316 (852)
330 4b63_A L-ornithine N5 monooxyg 96.9 0.0043 1.5E-07 66.7 11.3 110 224-333 40-212 (501)
331 3c4n_A Uncharacterized protein 96.9 0.0047 1.6E-07 64.3 11.2 51 280-334 174-235 (405)
332 3p1w_A Rabgdi protein; GDI RAB 96.8 0.00049 1.7E-08 73.2 3.5 55 278-334 256-313 (475)
333 2r0c_A REBC; flavin adenine di 96.8 0.0055 1.9E-07 66.7 11.8 53 279-334 139-195 (549)
334 1kf6_A Fumarate reductase flav 96.8 0.0086 2.9E-07 65.8 13.4 54 280-333 136-195 (602)
335 2aqj_A Tryptophan halogenase, 96.8 0.0086 3E-07 64.9 13.1 52 280-335 167-222 (538)
336 3jsk_A Cypbp37 protein; octame 96.8 0.029 9.9E-07 56.8 15.8 138 224-376 80-304 (344)
337 4gut_A Lysine-specific histone 96.7 0.00067 2.3E-08 76.7 3.5 40 56-95 334-373 (776)
338 1b37_A Protein (polyamine oxid 96.7 0.00079 2.7E-08 71.8 3.8 41 57-97 3-44 (472)
339 1pn0_A Phenol 2-monooxygenase; 96.7 0.0008 2.7E-08 75.1 3.5 35 58-92 8-47 (665)
340 2rgh_A Alpha-glycerophosphate 96.6 0.00091 3.1E-08 73.2 3.8 57 277-333 187-248 (571)
341 2bs2_A Quinol-fumarate reducta 96.6 0.00081 2.8E-08 74.8 3.4 35 58-92 5-39 (660)
342 2gjc_A Thiazole biosynthetic e 96.6 0.014 4.7E-07 58.8 12.1 70 224-305 66-174 (326)
343 2rgh_A Alpha-glycerophosphate 96.6 0.012 4.1E-07 64.3 12.4 33 224-270 33-65 (571)
344 2h88_A Succinate dehydrogenase 96.5 0.0012 4.1E-08 72.9 3.2 34 58-91 18-51 (621)
345 2e5v_A L-aspartate oxidase; ar 96.4 0.022 7.5E-07 60.6 12.7 52 280-335 121-176 (472)
346 1jnr_A Adenylylsulfate reducta 96.4 0.0018 6E-08 72.0 4.1 35 58-92 22-60 (643)
347 2e4g_A Tryptophan halogenase; 96.3 0.031 1E-06 60.7 13.5 53 279-335 195-252 (550)
348 3ayj_A Pro-enzyme of L-phenyla 96.2 0.0012 4.3E-08 73.3 1.5 36 58-93 56-100 (721)
349 1kdg_A CDH, cellobiose dehydro 96.0 0.0029 1E-07 68.8 3.5 36 57-92 6-41 (546)
350 2pyx_A Tryptophan halogenase; 96.0 0.031 1.1E-06 60.3 11.6 52 279-334 176-232 (526)
351 1pn0_A Phenol 2-monooxygenase; 96.0 0.035 1.2E-06 61.7 12.3 21 224-244 9-29 (665)
352 2h88_A Succinate dehydrogenase 95.9 0.056 1.9E-06 59.5 13.3 54 281-334 158-216 (621)
353 3t37_A Probable dehydrogenase; 95.8 0.0054 1.8E-07 66.2 4.4 35 58-92 17-52 (526)
354 2bs2_A Quinol-fumarate reducta 95.8 0.056 1.9E-06 59.9 12.6 53 281-333 161-218 (660)
355 2weu_A Tryptophan 5-halogenase 95.8 0.054 1.8E-06 58.0 12.2 35 225-270 4-38 (511)
356 1chu_A Protein (L-aspartate ox 95.6 0.029 1E-06 60.7 9.1 49 287-335 147-208 (540)
357 3fwz_A Inner membrane protein 95.5 0.0096 3.3E-07 52.0 4.2 36 56-91 5-40 (140)
358 1ju2_A HydroxynitrIle lyase; f 95.5 0.0066 2.3E-07 65.8 3.6 35 57-92 25-59 (536)
359 3q9t_A Choline dehydrogenase a 95.4 0.011 3.7E-07 64.6 4.7 36 57-92 5-41 (577)
360 3kkj_A Amine oxidase, flavin-c 95.2 0.015 5.1E-07 55.4 4.7 34 225-272 4-37 (336)
361 1id1_A Putative potassium chan 95.1 0.014 4.8E-07 51.7 3.8 34 57-90 2-35 (153)
362 1gpe_A Protein (glucose oxidas 95.1 0.013 4.3E-07 64.3 4.2 38 56-93 22-60 (587)
363 1n4w_A CHOD, cholesterol oxida 95.1 0.0099 3.4E-07 63.9 3.3 37 58-94 5-41 (504)
364 3qvp_A Glucose oxidase; oxidor 95.0 0.014 5E-07 63.6 4.5 36 57-92 18-54 (583)
365 4gut_A Lysine-specific histone 95.0 0.16 5.3E-06 57.4 12.9 39 291-332 542-582 (776)
366 1coy_A Cholesterol oxidase; ox 95.0 0.012 4.2E-07 63.2 3.7 37 57-93 10-46 (507)
367 2g1u_A Hypothetical protein TM 95.0 0.015 5.1E-07 51.6 3.6 35 57-91 18-52 (155)
368 2jbv_A Choline oxidase; alcoho 94.9 0.017 5.8E-07 62.7 4.5 37 57-93 12-49 (546)
369 3llv_A Exopolyphosphatase-rela 94.8 0.015 5.1E-07 50.6 3.2 33 58-90 6-38 (141)
370 3fim_B ARYL-alcohol oxidase; A 94.8 0.013 4.4E-07 63.8 3.2 36 58-93 2-38 (566)
371 3ic5_A Putative saccharopine d 94.7 0.017 5.9E-07 48.1 3.0 33 58-90 5-38 (118)
372 1lss_A TRK system potassium up 94.6 0.02 6.7E-07 49.4 3.4 32 59-90 5-36 (140)
373 1jnr_A Adenylylsulfate reducta 94.5 0.14 4.9E-06 56.5 10.8 51 285-335 158-218 (643)
374 3g5s_A Methylenetetrahydrofola 94.4 0.029 1E-06 57.6 4.6 32 225-270 3-34 (443)
375 3eag_A UDP-N-acetylmuramate:L- 94.4 0.048 1.6E-06 54.9 6.2 36 57-92 3-39 (326)
376 3dfz_A SIRC, precorrin-2 dehyd 93.8 0.043 1.5E-06 51.9 4.0 35 56-90 29-63 (223)
377 2hmt_A YUAA protein; RCK, KTN, 93.5 0.034 1.1E-06 48.1 2.7 33 58-90 6-38 (144)
378 3fpz_A Thiazole biosynthetic e 93.1 0.048 1.6E-06 54.7 3.4 69 223-303 65-141 (326)
379 1vg0_A RAB proteins geranylger 93.0 0.059 2E-06 59.2 4.1 40 57-96 7-46 (650)
380 1kyq_A Met8P, siroheme biosynt 92.9 0.044 1.5E-06 53.6 2.6 35 57-91 12-46 (274)
381 1f0y_A HCDH, L-3-hydroxyacyl-C 92.8 0.069 2.4E-06 53.0 4.1 35 57-91 14-48 (302)
382 3c85_A Putative glutathione-re 92.7 0.058 2E-06 49.1 3.1 35 57-91 38-73 (183)
383 4dgk_A Phytoene dehydrogenase; 92.6 0.069 2.4E-06 56.9 4.0 36 224-273 2-37 (501)
384 2x5o_A UDP-N-acetylmuramoylala 92.5 0.063 2.1E-06 56.5 3.4 35 58-92 5-39 (439)
385 3lk7_A UDP-N-acetylmuramoylala 92.5 0.37 1.3E-05 50.7 9.3 76 222-335 8-84 (451)
386 3oj0_A Glutr, glutamyl-tRNA re 92.2 0.13 4.3E-06 44.9 4.5 33 58-90 21-53 (144)
387 3eag_A UDP-N-acetylmuramate:L- 92.2 0.49 1.7E-05 47.4 9.5 71 223-335 4-78 (326)
388 3dfz_A SIRC, precorrin-2 dehyd 91.8 0.31 1.1E-05 45.9 7.0 108 222-375 30-141 (223)
389 3l4b_C TRKA K+ channel protien 91.7 0.084 2.9E-06 49.6 2.9 31 60-90 2-32 (218)
390 3i3l_A Alkylhalidase CMLS; fla 91.5 0.15 5E-06 55.8 5.0 33 224-270 24-56 (591)
391 3lk7_A UDP-N-acetylmuramoylala 91.5 0.1 3.5E-06 55.0 3.6 35 57-91 8-42 (451)
392 4e12_A Diketoreductase; oxidor 91.2 0.14 4.6E-06 50.4 4.0 35 57-91 3-37 (283)
393 4g65_A TRK system potassium up 91.1 0.14 4.9E-06 54.0 4.3 33 58-90 3-35 (461)
394 4ffl_A PYLC; amino acid, biosy 91.1 0.13 4.3E-06 52.5 3.8 35 58-92 1-35 (363)
395 4dio_A NAD(P) transhydrogenase 90.8 0.15 5.1E-06 52.6 3.9 34 58-91 190-223 (405)
396 3i83_A 2-dehydropantoate 2-red 90.8 0.14 4.8E-06 51.2 3.7 32 59-90 3-34 (320)
397 3vtf_A UDP-glucose 6-dehydroge 90.8 0.16 5.4E-06 53.1 4.1 40 52-91 15-54 (444)
398 3ius_A Uncharacterized conserv 90.7 0.15 5.2E-06 49.7 3.8 34 58-91 5-38 (286)
399 1evy_A Glycerol-3-phosphate de 90.7 0.16 5.4E-06 51.8 4.1 34 58-91 15-48 (366)
400 4gde_A UDP-galactopyranose mut 90.7 0.23 7.8E-06 52.8 5.5 36 224-272 11-46 (513)
401 1pzg_A LDH, lactate dehydrogen 90.7 0.15 5.3E-06 51.3 3.9 34 58-91 9-43 (331)
402 2iid_A L-amino-acid oxidase; f 90.6 0.24 8.1E-06 52.6 5.5 60 223-296 33-110 (498)
403 3gpi_A NAD-dependent epimerase 90.5 0.15 5.1E-06 49.8 3.6 36 57-92 2-37 (286)
404 2ew2_A 2-dehydropantoate 2-red 90.4 0.15 5.3E-06 50.4 3.6 33 58-90 3-35 (316)
405 3ihm_A Styrene monooxygenase A 90.2 0.22 7.4E-06 52.1 4.7 33 224-270 23-55 (430)
406 3k96_A Glycerol-3-phosphate de 90.2 0.21 7.2E-06 50.8 4.4 36 56-91 27-62 (356)
407 3nrn_A Uncharacterized protein 90.1 0.26 8.8E-06 51.1 5.2 34 225-272 2-35 (421)
408 2a9f_A Putative malic enzyme ( 89.9 0.15 5.1E-06 52.1 3.0 36 56-91 186-222 (398)
409 3p2y_A Alanine dehydrogenase/p 89.7 0.16 5.3E-06 52.0 2.9 35 57-91 183-217 (381)
410 1lld_A L-lactate dehydrogenase 89.5 0.2 6.9E-06 50.0 3.6 34 58-91 7-42 (319)
411 3ghy_A Ketopantoate reductase 89.5 0.19 6.7E-06 50.5 3.5 33 58-90 3-35 (335)
412 3dme_A Conserved exported prot 89.5 0.3 1E-05 49.2 4.9 33 225-271 6-38 (369)
413 3e8x_A Putative NAD-dependent 89.4 0.19 6.7E-06 47.4 3.3 36 56-91 19-55 (236)
414 3hn2_A 2-dehydropantoate 2-red 89.4 0.16 5.4E-06 50.7 2.7 32 59-90 3-34 (312)
415 3fwz_A Inner membrane protein 89.4 0.54 1.9E-05 40.5 5.9 73 224-332 8-80 (140)
416 3tl2_A Malate dehydrogenase; c 89.4 0.24 8.2E-06 49.4 4.0 35 56-90 6-41 (315)
417 3ka7_A Oxidoreductase; structu 89.3 0.32 1.1E-05 50.3 5.1 34 225-272 2-35 (425)
418 3doj_A AT3G25530, dehydrogenas 89.2 0.24 8.3E-06 49.3 3.9 36 56-91 19-54 (310)
419 3gvi_A Malate dehydrogenase; N 89.2 0.24 8.3E-06 49.6 3.9 36 56-91 5-41 (324)
420 1bg6_A N-(1-D-carboxylethyl)-L 89.2 0.22 7.6E-06 50.4 3.7 33 58-90 4-36 (359)
421 1vl6_A Malate oxidoreductase; 89.1 0.19 6.4E-06 51.3 3.0 34 57-90 191-225 (388)
422 2raf_A Putative dinucleotide-b 89.1 0.27 9.1E-06 45.9 3.9 36 57-92 18-53 (209)
423 3k7m_X 6-hydroxy-L-nicotine ox 89.1 0.31 1.1E-05 50.6 4.8 34 225-272 3-36 (431)
424 3dhn_A NAD-dependent epimerase 89.0 0.28 9.7E-06 45.8 4.0 34 58-91 4-38 (227)
425 2aef_A Calcium-gated potassium 88.9 0.24 8.1E-06 47.0 3.4 34 57-91 8-41 (234)
426 2dpo_A L-gulonate 3-dehydrogen 88.8 0.23 7.8E-06 49.7 3.4 35 57-91 5-39 (319)
427 3i6d_A Protoporphyrinogen oxid 88.8 0.29 1E-05 51.2 4.4 41 224-272 6-46 (470)
428 3gg2_A Sugar dehydrogenase, UD 88.7 0.24 8.3E-06 52.1 3.7 33 59-91 3-35 (450)
429 4huj_A Uncharacterized protein 88.4 0.17 5.7E-06 47.7 2.0 36 56-91 21-57 (220)
430 1hdo_A Biliverdin IX beta redu 88.4 0.3 1E-05 44.7 3.7 33 59-91 4-37 (206)
431 1zcj_A Peroxisomal bifunctiona 88.3 0.46 1.6E-05 50.2 5.4 36 56-91 35-70 (463)
432 1x13_A NAD(P) transhydrogenase 88.3 0.27 9.3E-06 50.9 3.6 34 58-91 172-205 (401)
433 3nks_A Protoporphyrinogen oxid 88.2 0.35 1.2E-05 50.9 4.6 34 225-272 4-39 (477)
434 1ks9_A KPA reductase;, 2-dehyd 88.1 0.31 1.1E-05 47.6 3.8 33 60-92 2-34 (291)
435 1pjq_A CYSG, siroheme synthase 88.1 0.24 8.2E-06 52.3 3.1 34 57-90 11-44 (457)
436 2b9w_A Putative aminooxidase; 88.1 0.41 1.4E-05 49.5 4.9 35 224-272 7-42 (424)
437 3qha_A Putative oxidoreductase 88.1 0.35 1.2E-05 47.7 4.2 34 58-91 15-48 (296)
438 1jw9_B Molybdopterin biosynthe 88.0 0.24 8.4E-06 47.6 2.9 34 58-91 31-65 (249)
439 3qvo_A NMRA family protein; st 87.9 0.34 1.2E-05 45.8 3.9 38 54-91 19-58 (236)
440 3pid_A UDP-glucose 6-dehydroge 87.9 0.37 1.3E-05 50.2 4.3 35 56-91 34-68 (432)
441 3ego_A Probable 2-dehydropanto 87.9 0.37 1.2E-05 47.9 4.2 32 58-90 2-33 (307)
442 2gag_B Heterotetrameric sarcos 87.8 0.44 1.5E-05 48.8 4.9 33 224-270 22-56 (405)
443 2e1m_A L-glutamate oxidase; L- 87.8 0.5 1.7E-05 48.4 5.2 37 222-272 43-80 (376)
444 1l7d_A Nicotinamide nucleotide 87.7 0.34 1.2E-05 49.9 3.9 35 57-91 171-205 (384)
445 3k6j_A Protein F01G10.3, confi 87.7 0.42 1.4E-05 50.2 4.6 37 56-92 52-88 (460)
446 2hjr_A Malate dehydrogenase; m 87.7 0.35 1.2E-05 48.6 3.9 34 58-91 14-48 (328)
447 2gf3_A MSOX, monomeric sarcosi 87.7 0.43 1.5E-05 48.5 4.7 33 225-271 5-37 (389)
448 3ado_A Lambda-crystallin; L-gu 87.6 0.31 1.1E-05 48.7 3.4 34 58-91 6-39 (319)
449 3g79_A NDP-N-acetyl-D-galactos 87.5 0.31 1.1E-05 51.5 3.6 35 58-92 18-54 (478)
450 1t2d_A LDH-P, L-lactate dehydr 87.4 0.38 1.3E-05 48.1 4.0 34 58-91 4-38 (322)
451 1rsg_A FMS1 protein; FAD bindi 87.4 0.43 1.5E-05 51.1 4.7 34 224-271 9-43 (516)
452 2y0c_A BCEC, UDP-glucose dehyd 87.4 0.33 1.1E-05 51.5 3.7 34 58-91 8-41 (478)
453 2ewd_A Lactate dehydrogenase,; 87.3 0.33 1.1E-05 48.4 3.5 34 58-91 4-38 (317)
454 1pjc_A Protein (L-alanine dehy 87.3 0.35 1.2E-05 49.3 3.7 33 58-90 167-199 (361)
455 3g0o_A 3-hydroxyisobutyrate de 87.2 0.36 1.2E-05 47.8 3.7 35 57-91 6-40 (303)
456 3dtt_A NADP oxidoreductase; st 87.2 0.36 1.2E-05 46.2 3.5 37 55-91 16-52 (245)
457 3r6d_A NAD-dependent epimerase 87.1 0.45 1.5E-05 44.3 4.1 33 58-90 5-39 (221)
458 3llv_A Exopolyphosphatase-rela 87.1 0.95 3.3E-05 38.8 6.0 49 224-298 7-55 (141)
459 3l9w_A Glutathione-regulated p 87.1 0.32 1.1E-05 50.6 3.3 34 58-91 4-37 (413)
460 1y6j_A L-lactate dehydrogenase 87.1 0.36 1.2E-05 48.2 3.6 34 58-91 7-42 (318)
461 1c0p_A D-amino acid oxidase; a 87.0 0.58 2E-05 47.2 5.2 31 225-269 8-38 (363)
462 2g1u_A Hypothetical protein TM 87.0 0.82 2.8E-05 40.1 5.5 38 221-272 17-54 (155)
463 3p7m_A Malate dehydrogenase; p 87.0 0.42 1.4E-05 47.8 4.0 36 56-91 3-39 (321)
464 2pzm_A Putative nucleotide sug 87.0 0.55 1.9E-05 46.8 4.9 38 54-91 16-54 (330)
465 2vns_A Metalloreductase steap3 86.9 0.34 1.2E-05 45.4 3.1 34 57-90 27-60 (215)
466 3g17_A Similar to 2-dehydropan 86.9 0.22 7.4E-06 49.2 1.8 34 58-91 2-35 (294)
467 1ur5_A Malate dehydrogenase; o 86.8 0.4 1.4E-05 47.7 3.7 33 59-91 3-36 (309)
468 2jae_A L-amino acid oxidase; o 86.8 0.57 1.9E-05 49.5 5.2 37 223-273 11-47 (489)
469 1s3e_A Amine oxidase [flavin-c 86.8 0.48 1.7E-05 50.6 4.7 39 292-333 226-266 (520)
470 2h78_A Hibadh, 3-hydroxyisobut 86.6 0.34 1.2E-05 47.8 3.1 34 58-91 3-36 (302)
471 2v6b_A L-LDH, L-lactate dehydr 86.5 0.4 1.4E-05 47.6 3.5 33 59-91 1-35 (304)
472 2egg_A AROE, shikimate 5-dehyd 86.4 0.55 1.9E-05 46.4 4.4 34 57-90 140-174 (297)
473 1nyt_A Shikimate 5-dehydrogena 86.3 0.45 1.5E-05 46.3 3.7 34 57-90 118-151 (271)
474 3g3e_A D-amino-acid oxidase; F 86.3 0.58 2E-05 47.0 4.7 38 225-270 2-39 (351)
475 2uyy_A N-PAC protein; long-cha 86.3 0.47 1.6E-05 47.1 4.0 34 58-91 30-63 (316)
476 4dll_A 2-hydroxy-3-oxopropiona 86.2 0.41 1.4E-05 47.9 3.5 35 57-91 30-64 (320)
477 2yg5_A Putrescine oxidase; oxi 86.2 0.58 2E-05 48.8 4.8 59 224-297 6-81 (453)
478 1dlj_A UDP-glucose dehydrogena 86.2 0.58 2E-05 48.4 4.7 31 60-91 2-32 (402)
479 1z82_A Glycerol-3-phosphate de 86.1 0.43 1.5E-05 47.9 3.6 34 57-90 13-46 (335)
480 3phh_A Shikimate dehydrogenase 86.1 0.48 1.6E-05 46.0 3.8 34 58-91 118-151 (269)
481 3c24_A Putative oxidoreductase 86.1 0.54 1.8E-05 46.0 4.2 33 58-90 11-44 (286)
482 4id9_A Short-chain dehydrogena 86.0 0.38 1.3E-05 48.2 3.1 38 55-92 16-54 (347)
483 2qyt_A 2-dehydropantoate 2-red 86.0 0.28 9.6E-06 48.6 2.1 32 58-89 8-45 (317)
484 2bcg_G Secretory pathway GDP d 85.8 0.6 2.1E-05 49.0 4.7 37 224-274 12-48 (453)
485 3ew7_A LMO0794 protein; Q8Y8U8 85.7 0.48 1.7E-05 43.8 3.5 32 60-91 2-34 (221)
486 2eez_A Alanine dehydrogenase; 85.7 0.47 1.6E-05 48.4 3.7 34 57-90 165-198 (369)
487 1jay_A Coenzyme F420H2:NADP+ o 85.6 0.59 2E-05 43.3 4.0 31 60-90 2-33 (212)
488 3pef_A 6-phosphogluconate dehy 85.6 0.46 1.6E-05 46.5 3.4 33 59-91 2-34 (287)
489 2pv7_A T-protein [includes: ch 85.6 0.76 2.6E-05 45.3 5.0 34 58-91 21-55 (298)
490 3pqe_A L-LDH, L-lactate dehydr 85.6 0.45 1.5E-05 47.7 3.4 34 57-90 4-39 (326)
491 2bi7_A UDP-galactopyranose mut 85.5 0.72 2.5E-05 47.3 5.0 35 225-273 5-39 (384)
492 4e21_A 6-phosphogluconate dehy 85.5 0.49 1.7E-05 48.1 3.7 36 56-91 20-55 (358)
493 3vps_A TUNA, NAD-dependent epi 85.4 0.5 1.7E-05 46.6 3.6 36 57-92 6-42 (321)
494 1zej_A HBD-9, 3-hydroxyacyl-CO 85.4 0.62 2.1E-05 45.9 4.2 34 57-91 11-44 (293)
495 4a7p_A UDP-glucose dehydrogena 85.3 0.49 1.7E-05 49.6 3.7 35 58-92 8-42 (446)
496 3l6d_A Putative oxidoreductase 85.3 0.65 2.2E-05 46.0 4.4 35 57-91 8-42 (306)
497 3pdu_A 3-hydroxyisobutyrate de 85.2 0.31 1E-05 47.8 1.9 33 59-91 2-34 (287)
498 2we8_A Xanthine dehydrogenase; 85.2 0.57 1.9E-05 48.1 4.0 37 58-94 204-240 (386)
499 3dje_A Fructosyl amine: oxygen 85.2 0.71 2.4E-05 48.0 4.8 34 225-272 8-42 (438)
500 3sc6_A DTDP-4-dehydrorhamnose 85.1 0.69 2.4E-05 44.9 4.4 30 60-89 7-37 (287)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=1.2e-78 Score=661.18 Aligned_cols=435 Identities=40% Similarity=0.725 Sum_probs=377.3
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEE
Q 007975 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (583)
Q Consensus 55 ~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v 134 (583)
...++||||||||+||+++|+.|++.+++|||||++++|.|+|++|+++.|.++++++..++++++.....+++|++++|
T Consensus 39 ~~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~~~v~~~~~~v 118 (502)
T 4g6h_A 39 HSDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEA 118 (502)
T ss_dssp SCSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCSSCEEEEEEEE
T ss_pred CCCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhcCCeEEEEEEE
Confidence 34578999999999999999999999999999999999999999999999999999999999988765544688999999
Q ss_pred EEEecCCCEEEEecCCCC----------CCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHH
Q 007975 135 FKIDAENKKVYCRSSQNT----------NLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVI 204 (583)
Q Consensus 135 ~~id~~~~~v~~~~~~~~----------~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~ 204 (583)
+.||+++++|+++..... .....+..++.||+||||||++|+++++||++++++++++++|+.++++++.
T Consensus 119 ~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l~ 198 (502)
T 4g6h_A 119 TSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFA 198 (502)
T ss_dssp EEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHHH
T ss_pred EEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHHH
Confidence 999999999988652210 0001123589999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHH
Q 007975 205 ESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFA 284 (583)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~ 284 (583)
++++.+.+....+++++..++++|||||++|+|+|++++++.++.+.+.||.+..+.+|+|+++.++++|.+++++++++
T Consensus 199 ~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~~ 278 (502)
T 4g6h_A 199 ANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYA 278 (502)
T ss_dssp HHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHHH
T ss_pred HHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHHH
Confidence 99999887666666777889999999999999999999999988888888877677899999999999999999999999
Q ss_pred HHHHHhCCCEEEeCCeEEEEeCCeEEEEEc-CCCe--eEEeecceEEEccCCCCchhHHHHHHHhCc--CCCcceEeCCC
Q 007975 285 EEKFSRDGIDVKLGSMVVKVTDKEIFTKVR-GNGE--TSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEW 359 (583)
Q Consensus 285 ~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~-~~G~--~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~ 359 (583)
++.|+++||+|+++++|++|+++++.+... .+|+ ..+|++|+||||+|++++|.+..+...++. +.+|+|.||++
T Consensus 279 ~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g~I~Vd~~ 358 (502)
T 4g6h_A 279 QSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRGLAVNDF 358 (502)
T ss_dssp HHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCSSEEBCTT
T ss_pred HHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCCceeECCc
Confidence 999999999999999999999998876542 3453 235999999999999999888788777765 66789999999
Q ss_pred CccCCCCCEEEcCcccccccchhhhHHHHHhhhcccCCCCCchhHHHHHHHHhhhcccchhHHHhhhcccCchhhhhhhh
Q 007975 360 LRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKADKDNSGTLTVKEFQEVIKDICERYPQVELYLKNKKMGDFGDLLKEA 439 (583)
Q Consensus 360 l~~~~~~~VyAiGD~a~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (583)
||++++|||||+||||..
T Consensus 359 lq~~~~~~IfAiGD~a~~-------------------------------------------------------------- 376 (502)
T 4g6h_A 359 LQVKGSNNIFAIGDNAFA-------------------------------------------------------------- 376 (502)
T ss_dssp SBBTTCSSEEECGGGEES--------------------------------------------------------------
T ss_pred cccCCCCCEEEEEcccCC--------------------------------------------------------------
Confidence 999999999999999863
Q ss_pred hccccccccccCHHHHHHHhhhccccCCCCCchhhhHHHHHHHHHHHHHhhhhhccC----CCC----CccccCCCCCCC
Q 007975 440 KGDVAQDAVELNIEEFKKALSEVDSQMKNLPATAQVAAQQGKYLAKCFNRMEEAEKN----PEG----PLRFRGTGRHRF 511 (583)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~taq~A~~qg~~~a~~i~~~~~~~~~----~~~----~~~~~g~~~~~~ 511 (583)
++|++||+|.|||+++|+||.+...++.. ... ...+.+ +++
T Consensus 377 ----------------------------~~p~~a~~A~qqg~~~A~ni~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 425 (502)
T 4g6h_A 377 ----------------------------GLPPTAQVAHQEAEYLAKNFDKMAQIPNFQKNLSSRKDKIDLLFEE---NNF 425 (502)
T ss_dssp ----------------------------SSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHTTSSSCCHHHHHHH---TTC
T ss_pred ----------------------------CCCCchHHHHHHHHHHHHHHHHHhccchhhhhhhhccchhhhhhcC---CCC
Confidence 56999999999999999999876433110 000 001223 478
Q ss_pred CCCeeecCcceEEccCCCeeeecCCc----ccchhHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccCCCC
Q 007975 512 QPFRYQHLGQFAPLGGEQTAAQLPWD----WVSIGRSSQWLWYSVYTSKLVSWRTRALVVSDWTRRFIFGRDSSG 582 (583)
Q Consensus 512 ~pf~~~~~G~~~~lG~~~av~~~~~~----~~~~G~~a~~~w~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 582 (583)
+||+|+++|+|+|||+++||+++++. +.++|++||++||++|++++++||||++|++||++++|||||+||
T Consensus 426 ~pF~y~~~G~~a~lG~~~av~~~~~~~~~~~~~~G~~a~~~w~~~yl~~l~~~r~r~~v~~~W~~~~~fgRdisr 500 (502)
T 4g6h_A 426 KPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRDFFK 500 (502)
T ss_dssp CCCCCCCCEEEEECSTTCEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHSCCCCCT
T ss_pred CCCEecCcceEEEEeCCceEEEccCCCccceecccHHHHHHHHHHHHHHccchhhhHHHHHHHHHHHhCCCCCcC
Confidence 99999999999999999999998642 334799999999999999999999999999999999999999998
No 2
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=100.00 E-value=3.5e-55 Score=469.04 Aligned_cols=398 Identities=20% Similarity=0.261 Sum_probs=313.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCC--CCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~--~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~ 135 (583)
.|+|||||||+||++||..|++ .+++|||||++++|.|+|+++++..|..+++++..++++++++.+ ++|++++|+
T Consensus 2 ~K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g--v~~i~~~v~ 79 (430)
T 3hyw_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN--IEFINEKAE 79 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT--EEEECSCEE
T ss_pred CCcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC--cEEEEeEEE
Confidence 3689999999999999999984 568999999999999999999999999999999999999998887 778999999
Q ss_pred EEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCC
Q 007975 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNL 215 (583)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 215 (583)
.||+++++|+++++. ++.||+||||||+++. +++||.+++++.+++.+++.++++++.+...
T Consensus 80 ~Id~~~~~V~~~~g~----------~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~~~------- 141 (430)
T 3hyw_A 80 SIDPDANTVTTQSGK----------KIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQELYA------- 141 (430)
T ss_dssp EEETTTTEEEETTCC----------EEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHHHH-------
T ss_pred EEECCCCEEEECCCC----------EEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhhcc-------
Confidence 999999999998764 8999999999999864 6899999999999999999999998865432
Q ss_pred CHHHHhccceEEEEcCChhHHHHHHHHHHhh---hHhHhhhcCCCCCCceEEEEecCCcccC---cccHHHHHHHHHHHH
Q 007975 216 SDEERKRILHFVIVGGGPTGVEFAAELHDFV---DEDLFKLYPKVKDSVKITLLEAADHILN---MFDKRITAFAEEKFS 289 (583)
Q Consensus 216 ~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~---~~~~~~~~p~~~~~~~Vtlv~~~~~il~---~~~~~~~~~~~~~L~ 289 (583)
...++|+||+ +|+|++....++. ...+.+. ..+...+|++++..+.+.+ ...+...+.+++.|+
T Consensus 142 -------~~~~vv~gg~-~gve~~~~~~e~a~~~~~~l~~~--g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l~~~l~ 211 (430)
T 3hyw_A 142 -------NPGPVVIGAI-PGVSCFGPAYEFALMLHYELKKR--GIRYKVPMTFITSEPYLGHFGVGGIGASKRLVEDLFA 211 (430)
T ss_dssp -------SCCCEEEEEC-TTCCCCHHHHHHHHHHHHHHHHT--TCGGGCCEEEECSSSSTTCTTTTCSTTHHHHHHHHHH
T ss_pred -------CCceEEEeCC-CcEEEhHHHHHHHHHHHHHHHHh--cccccceeeeecccchhhhccchhhHHHHHHHHHHHH
Confidence 2245555554 3554443332221 1112221 1224578999998876533 455677888999999
Q ss_pred hCCCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCCCCccCCCCCEE
Q 007975 290 RDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIY 369 (583)
Q Consensus 290 ~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~Vy 369 (583)
++||++++++.|++|+++++++.+. +|+..++++|++||++|+++++.+......+..+.+|+|.||++||++++||||
T Consensus 212 ~~GV~~~~~~~v~~v~~~~~~~~~~-~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l~~~~~g~i~vd~~lq~t~~~~If 290 (430)
T 3hyw_A 212 ERNIDWIANVAVKAIEPDKVIYEDL-NGNTHEVPAKFTMFMPSFQGPEVVASAGDKVANPANKMVIVNRCFQNPTYKNIF 290 (430)
T ss_dssp HTTCEEECSCEEEEECSSEEEEECT-TSCEEEEECSEEEEECEEECCHHHHTTCTTTBCTTTCCBCCCTTSBCSSSTTEE
T ss_pred hCCeEEEeCceEEEEeCCceEEEee-CCCceEeecceEEEeccCCCchHHHhcccccccCCceEEEecccccCCCCCCEE
Confidence 9999999999999999999988863 455557999999999998776533221111111345789999999987999999
Q ss_pred EcCcccccccchhhhHHHHHhhhcccCCCCCchhHHHHHHHHhhhcccchhHHHhhhcccCchhhhhhhhhccccccccc
Q 007975 370 ALGDCATVNQRRVMEDIAAIFSKADKDNSGTLTVKEFQEVIKDICERYPQVELYLKNKKMGDFGDLLKEAKGDVAQDAVE 449 (583)
Q Consensus 370 AiGD~a~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (583)
|+|||+.+++.. +
T Consensus 291 AiGD~a~~p~~~-----------------~-------------------------------------------------- 303 (430)
T 3hyw_A 291 GVGVVTAIPPIE-----------------K-------------------------------------------------- 303 (430)
T ss_dssp ECSTTBCCCCSS-----------------C--------------------------------------------------
T ss_pred EeccEEecCCcc-----------------c--------------------------------------------------
Confidence 999999876421 0
Q ss_pred cCHHHHHHHhhhccccCCCCCchhhhHHHHHHHHHHHHHhhhhhccCCCCCccccCCCCCCCCCCeeecCcceEEccCCC
Q 007975 450 LNIEEFKKALSEVDSQMKNLPATAQVAAQQGKYLAKCFNRMEEAEKNPEGPLRFRGTGRHRFQPFRYQHLGQFAPLGGEQ 529 (583)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~p~taq~A~~qg~~~a~~i~~~~~~~~~~~~~~~~~g~~~~~~~pf~~~~~G~~~~lG~~~ 529 (583)
.......|++||.|.|||+++|+||.+.++| ++.++|.+.+.+.++++|.+.
T Consensus 304 -------------~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g---------------~~~~~~~~~~~~~~~~~G~~~ 355 (430)
T 3hyw_A 304 -------------TPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN---------------NPDKYAPRLSAICIADFGEDA 355 (430)
T ss_dssp -------------CSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT---------------CCCCEEECCCEEEEEECSSSE
T ss_pred -------------CcCcCccchHHHHHHHHHHHHHHHHHHHhcC---------------CCCCcccCCcEEEEEEcCCCc
Confidence 0001457999999999999999999888765 345566666788999999999
Q ss_pred eeeecC----C---------c---ccchhHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhcccCCC
Q 007975 530 TAAQLP----W---------D---WVSIGRSSQWLWYSVYTSKLVSWRTRALVVSDWTRRFIFGRDSS 581 (583)
Q Consensus 530 av~~~~----~---------~---~~~~G~~a~~~w~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 581 (583)
+++... . . +...++..|++|+..|...+|.|+||++++++|+....+.||++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~w~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 423 (430)
T 3hyw_A 356 GFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLKVHPIELCKDCE 423 (430)
T ss_dssp EEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHCCCSEEECSCCC
T ss_pred EEEEEcccCCccccccccccHHHHHHHHHHHHHHHHHHHHhCccHhHHHHHHHHHhcccccccCcccc
Confidence 986431 1 0 11136677889999999999999999999999999999999875
No 3
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=100.00 E-value=7.5e-44 Score=382.13 Aligned_cols=374 Identities=20% Similarity=0.251 Sum_probs=292.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCC---CCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~---~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v 134 (583)
+++|||||||++|+++|..|++ .+++|||||+++++.|.|.++.+..+....+++..++.+++++.+ ++++.++|
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g--v~~~~~~v 81 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKG--IHFIAQSA 81 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTT--CEEECSCE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCC--CEEEEeEE
Confidence 5899999999999999999997 899999999999999999999999998888889999999999888 55678999
Q ss_pred EEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccc---cCcccCCHHHHHHHHHHHHHHHHHcC
Q 007975 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEE---NCNFLKEVEDAQRIRRNVIESFEKAS 211 (583)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~---~~~~~~~~~~a~~l~~~l~~~~~~~~ 211 (583)
+.+|++++.|.++++. ++.||+||+|||+.|+.+.+||.++ +.+.+++.+++..+++.+...++
T Consensus 82 ~~id~~~~~V~~~~g~----------~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--- 148 (437)
T 3sx6_A 82 EQIDAEAQNITLADGN----------TVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLR--- 148 (437)
T ss_dssp EEEETTTTEEEETTSC----------EEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHHH---
T ss_pred EEEEcCCCEEEECCCC----------EEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHHh---
Confidence 9999999999887653 7999999999999999999999874 56678899999999887654321
Q ss_pred CCCCCHHHHhccceEEEEcCChhH------HHHHHHHHHhhhHhHhhhcCCCCCCce-EEEEecCCcc----cCcccHHH
Q 007975 212 LPNLSDEERKRILHFVIVGGGPTG------VEFAAELHDFVDEDLFKLYPKVKDSVK-ITLLEAADHI----LNMFDKRI 280 (583)
Q Consensus 212 ~~~~~~~~~~~~~~vvVVGgG~tg------vE~A~~l~~~~~~~~~~~~p~~~~~~~-Vtlv~~~~~i----l~~~~~~~ 280 (583)
..+++|||+|+++ +|+|..++..+++. ..+...+ |+++++.+.+ ++.++ ..
T Consensus 149 -----------~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~------g~~~~~~~Vtlv~~~~~~~~~~l~~~~-~~ 210 (437)
T 3sx6_A 149 -----------EPGPIVIGAMAGASCFGPAYEYAMIVASDLKKR------GMRDKIPSFTFITSEPYIGHLGIQGVG-DS 210 (437)
T ss_dssp -----------SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT------TCGGGCSCEEEEESSSSTTCTTTTCCT-TH
T ss_pred -----------CCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHc------CCcccCcEEEEEcCCccccccccCcch-HH
Confidence 2267889986654 99998887765431 0111234 9999999987 33333 47
Q ss_pred HHHHHHHHHhCCCEEEeCCeEEEEeCCeEEEEEc-CCCe---eEEeecceEEEccCCCCchhHHHHHHHhCc-CCCcceE
Q 007975 281 TAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVR-GNGE---TSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALA 355 (583)
Q Consensus 281 ~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~-~~G~---~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~-~~~g~i~ 355 (583)
.+.+.+.|+++||+++++++|++|+++++++.+. .+|+ ..++++|.++|++|..++... .+..++ +.+|+|.
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~---~~~~gl~~~~G~i~ 287 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAV---AGVEGLCNPGGFVL 287 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHH---HTSTTTBCTTSCBC
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCchhh---hccccccCCCCcEE
Confidence 8889999999999999999999999999887752 2332 346999999999997665432 222455 7789999
Q ss_pred eCCCCccCCCCCEEEcCcccccccchhhhHHHHHhhhcccCCCCCchhHHHHHHHHhhhcccchhHHHhhhcccCchhhh
Q 007975 356 TDEWLRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKADKDNSGTLTVKEFQEVIKDICERYPQVELYLKNKKMGDFGDL 435 (583)
Q Consensus 356 Vd~~l~~~~~~~VyAiGD~a~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (583)
||+++|++++|||||+|||+..+.+. +
T Consensus 288 Vd~~l~t~~~~~Ifa~GD~~~~~~~~-----------------~------------------------------------ 314 (437)
T 3sx6_A 288 VDEHQRSKKYANIFAAGIAIAIPPVE-----------------T------------------------------------ 314 (437)
T ss_dssp BCTTSBBSSCTTEEECGGGBCCCCSC-----------------C------------------------------------
T ss_pred eChhccCCCCCCEEEEEEEeccCCcC-----------------C------------------------------------
Confidence 99999998999999999999875310 0
Q ss_pred hhhhhccccccccccCHHHHHHHhhhccccCCCCCchhhhHHHHHHHHHHHHHhhhhhccCCCCCccccCCCCCCCCCCe
Q 007975 436 LKEAKGDVAQDAVELNIEEFKKALSEVDSQMKNLPATAQVAAQQGKYLAKCFNRMEEAEKNPEGPLRFRGTGRHRFQPFR 515 (583)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~taq~A~~qg~~~a~~i~~~~~~~~~~~~~~~~~g~~~~~~~pf~ 515 (583)
.....+.|++++.|.+||+++|+||.+.+.| ++++||.
T Consensus 315 ---------------------------~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g---------------~~~~~~~ 352 (437)
T 3sx6_A 315 ---------------------------TPVPTGAPKTGYMIESMVSAAVHNIKADLEG---------------RKGEQTM 352 (437)
T ss_dssp ---------------------------CSSCCCCCCCHHHHHHHHHHHHHHHHHHTTT---------------SCCCCCC
T ss_pred ---------------------------CcCCCCCCcHHHHHHHHHHHHHHHHHHHhcC---------------CCCCCcc
Confidence 0000246899999999999999999888655 3556776
Q ss_pred eecCcc-eEEccCCCeeeec-------CCcccchhHHHHHHHHHHHHHhccchhh
Q 007975 516 YQHLGQ-FAPLGGEQTAAQL-------PWDWVSIGRSSQWLWYSVYTSKLVSWRT 562 (583)
Q Consensus 516 ~~~~G~-~~~lG~~~av~~~-------~~~~~~~G~~a~~~w~~~~~~~~~~~~~ 562 (583)
+..... ++.+|.+.++.-. .+.+.+.|.++|++...+...++..+|+
T Consensus 353 ~~~~~~~~~~~G~~~~~~~~~~~~p~~~~~~~~~g~~~~~~K~~~~~~f~~~~~~ 407 (437)
T 3sx6_A 353 GTWNAVAFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAKVAFEKYFIRKMKM 407 (437)
T ss_dssp CSCCEEEEEECSSCEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEEEEeCCCceEEEeCCCCCCcccccccccHHHHHHHHHHHHHHHHHhcc
Confidence 665444 5568888776421 1224567999999888877766655443
No 4
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=100.00 E-value=4.1e-42 Score=364.47 Aligned_cols=350 Identities=18% Similarity=0.155 Sum_probs=269.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCC--CCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~--~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~ 135 (583)
.|||||||||+||++||.+|++ .+.+|||||++++|.++|+++.+..|..+.+++..+++.+.+ .+ ++|++++|+
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~-~g--v~~i~~~v~ 78 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRA-HG--IQVVHDSAL 78 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHH-TT--CEEECSCEE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHH-CC--CEEEEeEEE
Confidence 4799999999999999999974 457999999999999999999999999999999888887765 55 678999999
Q ss_pred EEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcccc-----CcccCCHHHHHHHHHHHHHHHHHc
Q 007975 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEEN-----CNFLKEVEDAQRIRRNVIESFEKA 210 (583)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~-----~~~~~~~~~a~~l~~~l~~~~~~~ 210 (583)
.||++++.|.+.++. ++.||+||||||++++.+++||..+. .+.+++.+++..+++.+....
T Consensus 79 ~id~~~~~v~~~~g~----------~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~--- 145 (401)
T 3vrd_B 79 GIDPDKKLVKTAGGA----------EFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESMD--- 145 (401)
T ss_dssp EEETTTTEEEETTSC----------EEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHSC---
T ss_pred EEEccCcEEEecccc----------eeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhcc---
Confidence 999999999987664 89999999999999999999998643 356788899999888875421
Q ss_pred CCCCCCHHHHhccceEEEEc------CChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc--CcccHHHHH
Q 007975 211 SLPNLSDEERKRILHFVIVG------GGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--NMFDKRITA 282 (583)
Q Consensus 211 ~~~~~~~~~~~~~~~vvVVG------gG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il--~~~~~~~~~ 282 (583)
.+..+++++ ++..+.|++.+++++++. .. .+.+|++++..+.+. +.+++.+.+
T Consensus 146 -----------~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~----~~----~~~~v~i~~~~~~~~~~~~~~~~~~~ 206 (401)
T 3vrd_B 146 -----------DGGVVIIAPPAPPFRCPPGPYERASQIAHYLKA----HK----SKSKVIILDNSQTFSKQAQFTKGWER 206 (401)
T ss_dssp -----------TTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHH----HC----TTCEEEEECSSSSCTTHHHHHHHHHH
T ss_pred -----------cCCcEEEecCCccEEeehHHHHHHHHHHHHHHh----cC----CCCEEEEEcccccccccccccHHHHH
Confidence 122333332 345677888888776532 11 247999999998873 457788888
Q ss_pred HHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc-CCCcceEeCCC
Q 007975 283 FAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEW 359 (583)
Q Consensus 283 ~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~-~~~g~i~Vd~~ 359 (583)
.+.+.+++.||++++++++..++. +...+.. .+|++ +++|+++|++|.+++ .+++..++ +++|+|.||++
T Consensus 207 ~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~-~~g~~--i~~D~vi~~~g~~~~----~~~~~~gl~~~~G~i~VD~~ 279 (401)
T 3vrd_B 207 LYGFGTENALIEWHPGPDAAVVKTDTEAMTVET-SFGET--FKAAVINLIPPQRAG----KIAQSASLTNDSGWCPVDIR 279 (401)
T ss_dssp HSCTTSTTCSEEEECTTTTCEEEEETTTTEEEE-TTSCE--EECSEEEECCCEEEC----HHHHHTTCCCTTSSBCBCTT
T ss_pred HHHHHHHhcCcEEEeCceEEEEEecccceEEEc-CCCcE--EEeeEEEEecCcCCc----hhHhhccccccCCCEEECCC
Confidence 888888999999999999888753 3333333 45775 999999999997655 35667788 78899999986
Q ss_pred -CccCCCCCEEEcCcccccccchhhhHHHHHhhhcccCCCCCchhHHHHHHHHhhhcccchhHHHhhhcccCchhhhhhh
Q 007975 360 -LRVEGSDSIYALGDCATVNQRRVMEDIAAIFSKADKDNSGTLTVKEFQEVIKDICERYPQVELYLKNKKMGDFGDLLKE 438 (583)
Q Consensus 360 -l~~~~~~~VyAiGD~a~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (583)
||++++|||||+|||+..
T Consensus 280 tl~~t~~p~VfAiGDva~~------------------------------------------------------------- 298 (401)
T 3vrd_B 280 TFESSLQPGIHVIGDACNA------------------------------------------------------------- 298 (401)
T ss_dssp TCBBSSSTTEEECGGGBCC-------------------------------------------------------------
T ss_pred cceecCCCCEEEecccccC-------------------------------------------------------------
Confidence 888899999999999863
Q ss_pred hhccccccccccCHHHHHHHhhhccccCCCCCchhhhHHHHHHHHHHHHHhhhhhccCCCCCccccCCCCCCCCCCeeec
Q 007975 439 AKGDVAQDAVELNIEEFKKALSEVDSQMKNLPATAQVAAQQGKYLAKCFNRMEEAEKNPEGPLRFRGTGRHRFQPFRYQH 518 (583)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~taq~A~~qg~~~a~~i~~~~~~~~~~~~~~~~~g~~~~~~~pf~~~~ 518 (583)
.|.|++|+.|.+||+++|+||.+.++|+ ++.||+|..
T Consensus 299 ----------------------------~~~pk~a~~A~~qa~v~A~ni~~~l~G~---------------~~~~~~y~~ 335 (401)
T 3vrd_B 299 ----------------------------APMPKSAYSANSQAKVAAAAVVALLKGE---------------EPGTPSYLN 335 (401)
T ss_dssp ----------------------------TTSCBSHHHHHHHHHHHHHHHHHHHHTC---------------CCCCCCEEE
T ss_pred ----------------------------CCCCchHHHHHHHHHHHHHHHHHHhcCC---------------CCCCcccCC
Confidence 3569999999999999999999887763 456777775
Q ss_pred Ccc-eEEccCCCee-------------eecC--CcccchhHHHHHHHHHHH
Q 007975 519 LGQ-FAPLGGEQTA-------------AQLP--WDWVSIGRSSQWLWYSVY 553 (583)
Q Consensus 519 ~G~-~~~lG~~~av-------------~~~~--~~~~~~G~~a~~~w~~~~ 553 (583)
..+ ++..|....+ ...+ +.....++.+|++|+.+.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (401)
T 3vrd_B 336 TCYSILAPGYGISIAAVYRPNAEGKAIEAVPDSGGITPVDAPDWVLEREVQ 386 (401)
T ss_dssp EEEEEEETTEEEEEEEEEEECTTSSSEEECTTCCEESCTTCCHHHHHHHHH
T ss_pred eEEEEEecCCceEEEEEecccCCCceEEEecccCCcccccchhHHHhccch
Confidence 543 2222322222 1111 112335778999998653
No 5
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=100.00 E-value=1.3e-41 Score=363.96 Aligned_cols=387 Identities=19% Similarity=0.252 Sum_probs=292.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCC--CCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~--~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~ 135 (583)
+++|||||||++|+++|..|++ .+++|||||+++++.+.|.++.+..+....+++...+.+++++.+ ++++.++|+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g--v~~~~~~v~ 79 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN--IEFINEKAE 79 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT--EEEECSCEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC--CEEEEEEEE
Confidence 4799999999999999999997 899999999999999999999998888888888888888888887 667789999
Q ss_pred EEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCC
Q 007975 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNL 215 (583)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 215 (583)
.++++.+.|.+.++. ++.||+||+|||+.++.+++.. .++...+++.+++..+++.+...+.
T Consensus 80 ~id~~~~~v~~~~g~----------~i~~d~liiAtG~~~~~pg~~~-~g~~~~~~~~~~a~~~~~~~~~~~~------- 141 (430)
T 3h28_A 80 SIDPDANTVTTQSGK----------KIEYDYLVIATGPKLVFGAEGQ-EENSTSICTAEHALETQKKLQELYA------- 141 (430)
T ss_dssp EEETTTTEEEETTCC----------EEECSEEEECCCCEEECCSBTH-HHHSCCCSSHHHHHHHHHHHHHHHH-------
T ss_pred EEECCCCEEEECCCc----------EEECCEEEEcCCcccccCCCCC-cCCccCcCCHHHHHHHHHHHHHHHh-------
Confidence 999999988886543 7999999999999977653321 2456678899999998877654321
Q ss_pred CHHHHhccceEEEEcCChhH------HHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc----cCcccHHHHHHHH
Q 007975 216 SDEERKRILHFVIVGGGPTG------VEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI----LNMFDKRITAFAE 285 (583)
Q Consensus 216 ~~~~~~~~~~vvVVGgG~tg------vE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i----l~~~~~~~~~~~~ 285 (583)
..+++|||+|+++ +|+|..++..+++. ..+...+|+++++.+.+ ++.++ ...+.+.
T Consensus 142 -------~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~------g~~~~~~V~~v~~~~~~~~~~l~~~~-~~~~~l~ 207 (430)
T 3h28_A 142 -------NPGPVVIGAIPGVSCFGPAYEFALMLHYELKKR------GIRYKVPMTFITSEPYLGHFGVGGIG-ASKRLVE 207 (430)
T ss_dssp -------SCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT------TCGGGCCEEEECSSSSTTCTTTTCST-THHHHHH
T ss_pred -------cCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHc------CCccceEEEEecCCccccccccCcch-HHHHHHH
Confidence 2256888987654 99998887654321 11123689999999877 33333 4788889
Q ss_pred HHHHhCCCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc-CCCc-ceEeCCCCccC
Q 007975 286 EKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRR-ALATDEWLRVE 363 (583)
Q Consensus 286 ~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~-~~~g-~i~Vd~~l~~~ 363 (583)
+.|+++||+++++++|++|+++++++.+.. ++..++++|.+||++|..+++.+..+. .++ +.+| +|.||+++|++
T Consensus 208 ~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~-~~g~~i~~D~vv~a~G~~~~~~l~~~~--~gl~~~~G~~i~Vd~~l~t~ 284 (430)
T 3h28_A 208 DLFAERNIDWIANVAVKAIEPDKVIYEDLN-GNTHEVPAKFTMFMPSFQGPEVVASAG--DKVANPANKMVIVNRCFQNP 284 (430)
T ss_dssp HHHHHTTCEEECSCEEEEECSSEEEEECTT-SCEEEEECSEEEEECEEECCHHHHTTC--TTTBCTTTCCBCCCTTSBCS
T ss_pred HHHHHCCCEEEeCCEEEEEeCCeEEEEecC-CCceEEeeeEEEECCCCccchhHhhcc--ccCcCCCCCEEecCccccCC
Confidence 999999999999999999999998887532 333469999999999976654322110 355 6789 99999999998
Q ss_pred CCCCEEEcCcccccccchhhhHHHHHhhhcccCCCCCchhHHHHHHHHhhhcccchhHHHhhhcccCchhhhhhhhhccc
Q 007975 364 GSDSIYALGDCATVNQRRVMEDIAAIFSKADKDNSGTLTVKEFQEVIKDICERYPQVELYLKNKKMGDFGDLLKEAKGDV 443 (583)
Q Consensus 364 ~~~~VyAiGD~a~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (583)
++|||||+|||+..+.+. |
T Consensus 285 ~~~~Ifa~GD~~~~~~~~-----------------~-------------------------------------------- 303 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIE-----------------K-------------------------------------------- 303 (430)
T ss_dssp SSTTEEECSTTBCCCCSS-----------------C--------------------------------------------
T ss_pred CCCCEEEEEeeeccCCcc-----------------C--------------------------------------------
Confidence 999999999999864310 0
Q ss_pred cccccccCHHHHHHHhhhccccCCCCCchhhhHHHHHHHHHHHHHhhhhhccCCCCCccccCCCCCCCCCCeeecCcc-e
Q 007975 444 AQDAVELNIEEFKKALSEVDSQMKNLPATAQVAAQQGKYLAKCFNRMEEAEKNPEGPLRFRGTGRHRFQPFRYQHLGQ-F 522 (583)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~taq~A~~qg~~~a~~i~~~~~~~~~~~~~~~~~g~~~~~~~pf~~~~~G~-~ 522 (583)
.+...+.|++++.|.+||+++|+||.+.+.|+ ++ ++++..... +
T Consensus 304 -------------------~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g~---------------~~-~~~~~~~~~~~ 348 (430)
T 3h28_A 304 -------------------TPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNN---------------PD-KYAPRLSAICI 348 (430)
T ss_dssp -------------------CSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTC---------------CC-CEEECCCEEEE
T ss_pred -------------------CCCCCCCCchHHHHHHHHHHHHHHHHHHhcCC---------------CC-CCcCCcceEEE
Confidence 00002468999999999999999998887663 22 355655444 4
Q ss_pred EEccCCCeeeec-------CCcccchhHHHHHHHHHHHHHhccchhhHHHHHH--HHHHhhhcc
Q 007975 523 APLGGEQTAAQL-------PWDWVSIGRSSQWLWYSVYTSKLVSWRTRALVVS--DWTRRFIFG 577 (583)
Q Consensus 523 ~~lG~~~av~~~-------~~~~~~~G~~a~~~w~~~~~~~~~~~~~~~~~~~--~w~~~~~~~ 577 (583)
+.+|.+.++... ...+...|.++|++...+...++..+|+-....+ .|+...|+|
T Consensus 349 ~~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~K~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 412 (430)
T 3h28_A 349 ADFGEDAGFFFADPVIPPRERVITKMGKWAHYFKTAFEKYFLWKVRNGNIAPSFEEKVLEIFLK 412 (430)
T ss_dssp EECSSSEEEEEEESSSSSCSEEEEEEEHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHHHHC
T ss_pred EEeCCCceEEEeCCCCCCccceeecccHHHHHHHHHHHHHHHHHhccCCcCchhHHHHHHhhcC
Confidence 458888776521 1224567999999999988888877776644433 445555334
No 6
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=2e-41 Score=362.83 Aligned_cols=275 Identities=21% Similarity=0.335 Sum_probs=228.0
Q ss_pred CeEEEECCcHHHHHHHHhcCCCC--CeEEEEcCCCCCCCC-CchhhhccccCCCcc--cchhHHHHHHhCCCcEEEEEeE
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAFT-PLLPSVTCGTVEARS--IVEPVRNIVRKKNVDICFWEAE 133 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g--~~Vtlie~~~~~~~~-p~l~~~~~g~~~~~~--i~~~~~~~~~~~~i~v~~~~~~ 133 (583)
+||||||||+||++||..|++.| .+|+|||+++++.|. +.++.+..+...... +......++++.+++++ ...+
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~ 79 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRRYALAYTPEKFYDRKQITVK-TYHE 79 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGGGTBCCCHHHHHHHHCCEEE-ETEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchhhhhhcCHHHHHHhcCCEEE-eCCe
Confidence 58999999999999999998655 679999999988775 566766655544332 33445667777786653 5778
Q ss_pred EEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCC
Q 007975 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLP 213 (583)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 213 (583)
|+.||.+.+.+.+.... ..+..++.||+||||||++|+.+++|| +..+.+++++++..+++.+..
T Consensus 80 V~~id~~~~~~~~~~~~-----~~~~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~~-------- 144 (437)
T 4eqs_A 80 VIAINDERQTVSVLNRK-----TNEQFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIKA-------- 144 (437)
T ss_dssp EEEEETTTTEEEEEETT-----TTEEEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHHH--------
T ss_pred EEEEEccCcEEEEEecc-----CCceEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhhc--------
Confidence 99999999998887654 223457999999999999999999988 456778899999988776532
Q ss_pred CCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCC
Q 007975 214 NLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGI 293 (583)
Q Consensus 214 ~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV 293 (583)
.+.++++|||||++|+|+|..+.++ +.+||++++.+++++.+++++.+.+.+.|+++||
T Consensus 145 -------~~~~~vvViGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~gV 203 (437)
T 4eqs_A 145 -------NQVDKVLVVGAGYVSLEVLENLYER--------------GLHPTLIHRSDKINKLMDADMNQPILDELDKREI 203 (437)
T ss_dssp -------HTCCEEEEECCSHHHHHHHHHHHHH--------------TCEEEEEESSSCCSTTSCGGGGHHHHHHHHHTTC
T ss_pred -------cCCcEEEEECCccchhhhHHHHHhc--------------CCcceeeeeeccccccccchhHHHHHHHhhccce
Confidence 2456999999999999999999987 5799999999999999999999999999999999
Q ss_pred EEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc--CCCcceEeCCCCccCCCCCEEEc
Q 007975 294 DVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSDSIYAL 371 (583)
Q Consensus 294 ~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAi 371 (583)
+++++++|++++++.+++.+ |++ +++|.||||+|.+ |++ .+++..++ +.+|+|.||+++|| +.|||||+
T Consensus 204 ~i~~~~~v~~~~~~~v~~~~---g~~--~~~D~vl~a~G~~--Pn~-~~~~~~gl~~~~~G~I~vd~~~~T-s~p~IyA~ 274 (437)
T 4eqs_A 204 PYRLNEEINAINGNEITFKS---GKV--EHYDMIIEGVGTH--PNS-KFIESSNIKLDRKGFIPVNDKFET-NVPNIYAI 274 (437)
T ss_dssp CEEESCCEEEEETTEEEETT---SCE--EECSEEEECCCEE--ESC-GGGTTSSCCCCTTSCEECCTTCBC-SSTTEEEC
T ss_pred EEEeccEEEEecCCeeeecC---CeE--EeeeeEEEEecee--cCc-HHHHhhhhhhccCCcEecCCCccC-CCCCEEEE
Confidence 99999999999999887754 775 9999999999954 444 46666776 67899999999998 89999999
Q ss_pred Cccccccc
Q 007975 372 GDCATVNQ 379 (583)
Q Consensus 372 GD~a~~~~ 379 (583)
|||+..+.
T Consensus 275 GDva~~~~ 282 (437)
T 4eqs_A 275 GDIATSHY 282 (437)
T ss_dssp GGGEEEEB
T ss_pred EEccCccc
Confidence 99998653
No 7
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.4e-41 Score=357.90 Aligned_cols=261 Identities=25% Similarity=0.386 Sum_probs=226.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCC-CCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEE
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF-TPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~-~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v 134 (583)
.+++||||||||+||++||..|...+.+|||||+++++.| .|.++.+..+..+.+++.....+++++.+++++ ...+|
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~i~~~-~~~~V 85 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNNIKVI-TSEFA 85 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTTCEEE-CSCCE
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCCCEEE-eCCEE
Confidence 4578999999999999999999888999999999998876 678888888888888888888889988886542 35689
Q ss_pred EEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCC
Q 007975 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPN 214 (583)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 214 (583)
+.||++++.|++.++. ++.||+||||||++|+.+++||.+ +.+.+++.+++..+++.+.
T Consensus 86 ~~id~~~~~v~~~~g~----------~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~---------- 144 (385)
T 3klj_A 86 TSIDPNNKLVTLKSGE----------KIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECK---------- 144 (385)
T ss_dssp EEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHH----------
T ss_pred EEEECCCCEEEECCCC----------EEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhh----------
Confidence 9999999999987654 899999999999999999999987 7888999999998887653
Q ss_pred CCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-ccHHHHHHHHHHHHhCCC
Q 007975 215 LSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRDGI 293 (583)
Q Consensus 215 ~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-~~~~~~~~~~~~L~~~GV 293 (583)
.+++++|||||++|+|+|..+.+. +.+|+++++.+++++. +++.+.+.+.+.+++.||
T Consensus 145 -------~~~~vvVIGgG~~g~E~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV 203 (385)
T 3klj_A 145 -------NKGKAFIIGGGILGIELAQAIIDS--------------GTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGI 203 (385)
T ss_dssp -------HHSCEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTC
T ss_pred -------cCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCC
Confidence 245999999999999999999886 5799999999999987 899999999999999999
Q ss_pred EEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCCCCccCCCCCEEEcCc
Q 007975 294 DVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGD 373 (583)
Q Consensus 294 ~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VyAiGD 373 (583)
+++++++|+++ |++ +++|.||+|+|++++ + .+++.+++..++.|.||+++|| +.|+|||+||
T Consensus 204 ~~~~~~~v~~i------------g~~--~~~D~vv~a~G~~p~--~-~~~~~~gl~~~~gi~vd~~~~t-~~~~IyA~GD 265 (385)
T 3klj_A 204 KIYTNSNFEEM------------GDL--IRSSCVITAVGVKPN--L-DFIKDTEIASKRGILVNDHMET-SIKDIYACGD 265 (385)
T ss_dssp EEECSCCGGGC------------HHH--HHHSEEEECCCEEEC--C-GGGTTSCCCBSSSEEECTTCBC-SSTTEEECGG
T ss_pred EEEeCCEEEEc------------CeE--EecCeEEECcCcccC--h-hhhhhcCCCcCCCEEECCCccc-CCCCEEEEEe
Confidence 99999998877 343 999999999996554 3 4566777743344999999999 8999999999
Q ss_pred cccc
Q 007975 374 CATV 377 (583)
Q Consensus 374 ~a~~ 377 (583)
|+..
T Consensus 266 ~a~~ 269 (385)
T 3klj_A 266 VAEF 269 (385)
T ss_dssp GEEE
T ss_pred eEec
Confidence 9975
No 8
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.8e-40 Score=346.01 Aligned_cols=263 Identities=26% Similarity=0.437 Sum_probs=221.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCC-CCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEe-EEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF-TPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEA-ECF 135 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~-~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~-~v~ 135 (583)
..+|||||||+||++||..|++.| +|+|||++++..| .++++.+..+..+.+++.....+++++.+ ++++.+ +|+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~--v~~~~g~~v~ 84 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRG--IEIRLAEEAK 84 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHHT--EEEECSCCEE
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhCC--cEEEECCEEE
Confidence 468999999999999999999989 9999999987655 47788777777777777777788888887 556655 699
Q ss_pred EEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCC
Q 007975 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNL 215 (583)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 215 (583)
.+|++.+.|. .++. ++.||+||||||++|+.|++|| .++.+.+++.+++.++++.+.
T Consensus 85 ~id~~~~~V~-~~g~----------~~~~d~lViATGs~p~~p~i~G-~~~v~~~~~~~~~~~l~~~~~----------- 141 (367)
T 1xhc_A 85 LIDRGRKVVI-TEKG----------EVPYDTLVLATGARAREPQIKG-KEYLLTLRTIFDADRIKESIE----------- 141 (367)
T ss_dssp EEETTTTEEE-ESSC----------EEECSEEEECCCEEECCCCSBT-GGGEECCCSHHHHHHHHHHHH-----------
T ss_pred EEECCCCEEE-ECCc----------EEECCEEEECCCCCCCCCCCCC-cCCEEEEcCHHHHHHHHHHhh-----------
Confidence 9999988887 4432 7999999999999999999999 466778889999888876542
Q ss_pred CHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEE
Q 007975 216 SDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDV 295 (583)
Q Consensus 216 ~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v 295 (583)
.+++++|||||++|+|+|..+.++ +.+|+++++.+++++ +++++.+.+.+.|++.||++
T Consensus 142 ------~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~gV~i 200 (367)
T 1xhc_A 142 ------NSGEAIIIGGGFIGLELAGNLAEA--------------GYHVKLIHRGAMFLG-LDEELSNMIKDMLEETGVKF 200 (367)
T ss_dssp ------HHSEEEEEECSHHHHHHHHHHHHT--------------TCEEEEECSSSCCTT-CCHHHHHHHHHHHHHTTEEE
T ss_pred ------cCCcEEEECCCHHHHHHHHHHHhC--------------CCEEEEEeCCCeecc-CCHHHHHHHHHHHHHCCCEE
Confidence 235999999999999999999876 579999999999999 99999999999999999999
Q ss_pred EeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCCCCccCCCCCEEEcCccc
Q 007975 296 KLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCA 375 (583)
Q Consensus 296 ~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VyAiGD~a 375 (583)
+++++|++++.+.+++. +|+ +++|.||||+|.+++ + .+++.+++..+++|.||+++|| +.|+|||+|||+
T Consensus 201 ~~~~~v~~i~~~~v~~~---~g~---i~~D~vi~a~G~~p~--~-~ll~~~gl~~~~gi~Vd~~~~t-~~~~IyA~GD~a 270 (367)
T 1xhc_A 201 FLNSELLEANEEGVLTN---SGF---IEGKVKICAIGIVPN--V-DLARRSGIHTGRGILIDDNFRT-SAKDVYAIGDCA 270 (367)
T ss_dssp ECSCCEEEECSSEEEET---TEE---EECSCEEEECCEEEC--C-HHHHHTTCCBSSSEECCTTSBC-SSTTEEECGGGE
T ss_pred EcCCEEEEEEeeEEEEC---CCE---EEcCEEEECcCCCcC--H-HHHHhCCCCCCCCEEECCCccc-CCCCEEEeEeee
Confidence 99999999997776653 354 899999999996544 4 3677788733344999999998 899999999998
Q ss_pred cc
Q 007975 376 TV 377 (583)
Q Consensus 376 ~~ 377 (583)
..
T Consensus 271 ~~ 272 (367)
T 1xhc_A 271 EY 272 (367)
T ss_dssp EB
T ss_pred ec
Confidence 64
No 9
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=100.00 E-value=1.1e-39 Score=346.90 Aligned_cols=280 Identities=22% Similarity=0.328 Sum_probs=235.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCC---CCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~---~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v 134 (583)
|++|||||||++|+++|..|++ .|++|+|||+++++.+.|.++....+....+++...+.+.+++.+ ++++.++|
T Consensus 1 m~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~~~v 78 (409)
T 3h8l_A 1 MTKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKG--IQFQEGTV 78 (409)
T ss_dssp -CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGT--CEEEECEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCC--eEEEEeeE
Confidence 4689999999999999999998 899999999999999999888888888888899999999998887 55678899
Q ss_pred EEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCC
Q 007975 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPN 214 (583)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 214 (583)
+.++++.+.|.+.++.+ +.+++.||+||+|+|+.|+.+.+||++++...+++.+++..+++.+...
T Consensus 79 ~~i~~~~~~V~~~~g~~------~~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~~-------- 144 (409)
T 3h8l_A 79 EKIDAKSSMVYYTKPDG------SMAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLESF-------- 144 (409)
T ss_dssp EEEETTTTEEEEECTTS------CEEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHHC--------
T ss_pred EEEeCCCCEEEEccCCc------ccceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHHh--------
Confidence 99999999999886541 2346999999999999999999999987777888899999888876531
Q ss_pred CCHHHHhccceEEEEcCC-------------------h------hHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecC
Q 007975 215 LSDEERKRILHFVIVGGG-------------------P------TGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA 269 (583)
Q Consensus 215 ~~~~~~~~~~~vvVVGgG-------------------~------tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~ 269 (583)
..+++|||+| . .|+|+|..+++.+++ ...++..+|+++++.
T Consensus 145 --------~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~------~g~~~~~~v~~~~~~ 210 (409)
T 3h8l_A 145 --------QGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKK------KGMLDKVHVTVFSPG 210 (409)
T ss_dssp --------CSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHT------TTCTTTEEEEEECSS
T ss_pred --------cCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHH------cCCCCCeEEEEEeCC
Confidence 1367799999 1 589999888776532 111234699999999
Q ss_pred CcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHh--C
Q 007975 270 DHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV--G 347 (583)
Q Consensus 270 ~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~--~ 347 (583)
+ +++.+++.+.+.+.+.|+++||+++++++|++++++++++. +|++ +++|.||+++|..+++ ++..+ +
T Consensus 211 ~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~---~g~~--~~~D~vi~a~G~~~~~----~l~~~~~~ 280 (409)
T 3h8l_A 211 E-YLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDE---KGNT--IPADITILLPPYTGNP----ALKNSTPD 280 (409)
T ss_dssp S-SSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEET---TSCE--EECSEEEEECCEECCH----HHHTSCGG
T ss_pred c-cccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEEC---CCCE--EeeeEEEECCCCCccH----HHHhcccc
Confidence 8 88889999999999999999999999999999999887664 3765 9999999999977664 34445 5
Q ss_pred c-CCCcceEeCCCCccCCCCCEEEcCccccc
Q 007975 348 Q-TNRRALATDEWLRVEGSDSIYALGDCATV 377 (583)
Q Consensus 348 ~-~~~g~i~Vd~~l~~~~~~~VyAiGD~a~~ 377 (583)
+ +.+|+|.||+++|++++|||||+|||+..
T Consensus 281 l~~~~G~i~vd~~~~~~~~~~vfa~GD~~~~ 311 (409)
T 3h8l_A 281 LVDDGGFIPTDLNMVSIKYDNVYAVGDANSM 311 (409)
T ss_dssp GSCTTSCBCBBTTSBBSSCTTEEECGGGBTT
T ss_pred CcCCCCCEEeCcccccCCCCCEEEeehhccC
Confidence 5 67899999999999899999999999864
No 10
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=4e-38 Score=335.46 Aligned_cols=274 Identities=23% Similarity=0.393 Sum_probs=228.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCe--EEEEcCCCCCCCC--CchhhhccccCCCcccchhHHHHHHhCCCcEEEEEe
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYD--VQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEA 132 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~--Vtlie~~~~~~~~--p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~ 132 (583)
++++|||||||+||++||..|++.|++ |+|||+++++.|. ++...+..+.....++......++.+.+ ++++.+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~ 85 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKA--VEMKLG 85 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBSSCHHHHHHTT--EEEEET
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhccCCHHHHHHCC--cEEEeC
Confidence 468999999999999999999988887 9999999987775 4554666777677777777788888887 555555
Q ss_pred -EEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHc
Q 007975 133 -ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKA 210 (583)
Q Consensus 133 -~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~ 210 (583)
+|+.+|++.+.|.+.++. .+.||+||+|||+.|+.+++||.+ ++.+.+++.+++..++..+.
T Consensus 86 ~~v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~------ 149 (415)
T 3lxd_A 86 AEVVSLDPAAHTVKLGDGS----------AIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELD------ 149 (415)
T ss_dssp CCEEEEETTTTEEEETTSC----------EEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHH------
T ss_pred CEEEEEECCCCEEEECCCC----------EEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhh------
Confidence 999999999999887654 899999999999999999999976 56778889999988876542
Q ss_pred CCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-ccHHHHHHHHHHHH
Q 007975 211 SLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFS 289 (583)
Q Consensus 211 ~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-~~~~~~~~~~~~L~ 289 (583)
..+++++|||+|++|+|+|..+..+ +.+|+++++.+++++. +++.+.+.+.+.++
T Consensus 150 ----------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~ 205 (415)
T 3lxd_A 150 ----------AGAKNAVVIGGGYIGLEAAAVLTKF--------------GVNVTLLEALPRVLARVAGEALSEFYQAEHR 205 (415)
T ss_dssp ----------TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHH
T ss_pred ----------hcCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEecCCchhhhhcCHHHHHHHHHHHH
Confidence 1156999999999999999999875 5799999999999985 79999999999999
Q ss_pred hCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCCCCccCCCCC
Q 007975 290 RDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDS 367 (583)
Q Consensus 290 ~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~ 367 (583)
++||+++++++|++++. +.+....+.+|++ +++|.||+|+|+.++. .+++.+++..++.|.||+++|| +.|+
T Consensus 206 ~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~--i~aD~Vv~a~G~~p~~---~l~~~~gl~~~~gi~vd~~~~t-~~~~ 279 (415)
T 3lxd_A 206 AHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSV--IPADIVIVGIGIVPCV---GALISAGASGGNGVDVDEFCRT-SLTD 279 (415)
T ss_dssp HTTCEEEETCCEEEEEESSSBEEEEEESSSCE--EECSEEEECSCCEESC---HHHHHTTCCCSSSEECCTTCBC-SSTT
T ss_pred hCCCEEEECCEEEEEEecCCcEEEEEeCCCCE--EEcCEEEECCCCccCh---HHHHhCCCCcCCCEEECCCCCc-CCCC
Confidence 99999999999999975 3443333455775 9999999999965543 4677788843345999999999 8999
Q ss_pred EEEcCcccccc
Q 007975 368 IYALGDCATVN 378 (583)
Q Consensus 368 VyAiGD~a~~~ 378 (583)
|||+|||+..+
T Consensus 280 iyA~GD~a~~~ 290 (415)
T 3lxd_A 280 VYAIGDCAAHA 290 (415)
T ss_dssp EEECGGGEEEE
T ss_pred EEEEEeeeeec
Confidence 99999999864
No 11
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=7.5e-39 Score=340.39 Aligned_cols=271 Identities=23% Similarity=0.388 Sum_probs=223.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCe--EEEEcCCCCCCCC--CchhhhccccCCCcccchhHHHHHHhCCCcEEEEEe-
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYD--VQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEA- 132 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~--Vtlie~~~~~~~~--p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~- 132 (583)
+++|||||||+||++||..|++.|++ |+|||+++++.|. ++...+..+....+.+ ....+++.+.+++ ++.+
T Consensus 2 ~~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~~~~~~~~~i~--~~~~~ 78 (410)
T 3ef6_A 2 ATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAEADWYGEARID--MLTGP 78 (410)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSCTTHHHHTTCE--EEESC
T ss_pred CCCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCCHHHHHHCCCE--EEeCC
Confidence 46999999999999999999988877 9999999988774 4555577777777776 5556677777754 5555
Q ss_pred EEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHcC
Q 007975 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKAS 211 (583)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~~ 211 (583)
+|+.+|++.+.|.+.++. ++.||+||+|||+.|+.+++||.+ ++.+.+++.+++..+++.+
T Consensus 79 ~v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~-------- 140 (410)
T 3ef6_A 79 EVTALDVQTRTISLDDGT----------TLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSW-------- 140 (410)
T ss_dssp CEEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHC--------
T ss_pred EEEEEECCCCEEEECCCC----------EEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHh--------
Confidence 999999999999887653 899999999999999999999976 5677888999988876543
Q ss_pred CCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-ccHHHHHHHHHHHHh
Q 007975 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSR 290 (583)
Q Consensus 212 ~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-~~~~~~~~~~~~L~~ 290 (583)
..+++++|||+|++|+|+|..+..+ +.+|+++++.+++++. +++.+.+.+.+.+++
T Consensus 141 ---------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l~~ 197 (410)
T 3ef6_A 141 ---------TSATRLLIVGGGLIGCEVATTARKL--------------GLSVTILEAGDELLVRVLGRRIGAWLRGLLTE 197 (410)
T ss_dssp ---------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSSHHHHCHHHHHHHHHHHHH
T ss_pred ---------ccCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCCccchhhcCHHHHHHHHHHHHH
Confidence 2456999999999999999999875 5799999999999875 889999999999999
Q ss_pred CCCEEEeCCeEEEEeCCe-EEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCCCCccCCCCCEE
Q 007975 291 DGIDVKLGSMVVKVTDKE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIY 369 (583)
Q Consensus 291 ~GV~v~~~~~V~~v~~~~-v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~Vy 369 (583)
.||++++++.|++++.++ +....+.+|++ +++|.||+|+|..++ + .+++.+++..+++|.||+++++ +.|+||
T Consensus 198 ~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~--i~aD~Vv~a~G~~p~--~-~l~~~~gl~~~~gi~vd~~~~t-~~~~Iy 271 (410)
T 3ef6_A 198 LGVQVELGTGVVGFSGEGQLEQVMASDGRS--FVADSALICVGAEPA--D-QLARQAGLACDRGVIVDHCGAT-LAKGVF 271 (410)
T ss_dssp HTCEEECSCCEEEEECSSSCCEEEETTSCE--EECSEEEECSCEEEC--C-HHHHHTTCCBSSSEECCTTSBC-SSTTEE
T ss_pred CCCEEEeCCEEEEEeccCcEEEEEECCCCE--EEcCEEEEeeCCeec--H-HHHHhCCCccCCeEEEccCeeE-CCCCEE
Confidence 999999999999998652 21112245765 999999999996554 3 4677788843355999999998 899999
Q ss_pred EcCcccccc
Q 007975 370 ALGDCATVN 378 (583)
Q Consensus 370 AiGD~a~~~ 378 (583)
|+|||+..+
T Consensus 272 A~GD~a~~~ 280 (410)
T 3ef6_A 272 AVGDVASWP 280 (410)
T ss_dssp ECGGGEEEE
T ss_pred EEEcceecc
Confidence 999999764
No 12
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=6.1e-38 Score=332.83 Aligned_cols=272 Identities=22% Similarity=0.435 Sum_probs=227.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC--eEEEEcCCCCCCCC--CchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~--~Vtlie~~~~~~~~--p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~ 133 (583)
+++|||||||+||++||..|++.|+ +|||||+++++.|. ++...+..+.....++.....+.+.+.+ ++++.++
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~--i~~~~~~ 78 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRPEKFFQDQA--IELISDR 78 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSCHHHHHHTT--EEEECCC
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCCHHHHHhCC--CEEEEEE
Confidence 3689999999999999999998888 89999999987774 4455677777677777777888888887 5555699
Q ss_pred EEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHcCC
Q 007975 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (583)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 212 (583)
|+.+|++.+.|.+.++. .+.||+||+|||+.|+.+++||.+ ++.+.+++.+++..++..+
T Consensus 79 v~~id~~~~~v~~~~g~----------~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~--------- 139 (404)
T 3fg2_P 79 MVSIDREGRKLLLASGT----------AIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRM--------- 139 (404)
T ss_dssp EEEEETTTTEEEESSSC----------EEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHG---------
T ss_pred EEEEECCCCEEEECCCC----------EEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHh---------
Confidence 99999999999887654 899999999999999999999976 5677888999988876553
Q ss_pred CCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-ccHHHHHHHHHHHHhC
Q 007975 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRD 291 (583)
Q Consensus 213 ~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-~~~~~~~~~~~~L~~~ 291 (583)
..+++++|||+|++|+|+|..+... +.+|+++++.+++++. +++.+.+.+.+.+++.
T Consensus 140 --------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~~~ 197 (404)
T 3fg2_P 140 --------PDKKHVVVIGAGFIGLEFAATARAK--------------GLEVDVVELAPRVMARVVTPEISSYFHDRHSGA 197 (404)
T ss_dssp --------GGCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSTTTTTSCHHHHHHHHHHHHHT
T ss_pred --------hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEeCCCcchhhccCHHHHHHHHHHHHhC
Confidence 2456999999999999999999875 5799999999999885 8899999999999999
Q ss_pred CCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCCCCccCCCCCEE
Q 007975 292 GIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIY 369 (583)
Q Consensus 292 GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~Vy 369 (583)
||+++++++|++++. +.+....+.+|++ +++|.||+|+|+.++. .+++.+++..++.|.||+++|+ +.|+||
T Consensus 198 GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~--i~aD~Vv~a~G~~p~~---~l~~~~gl~~~~Gi~vd~~~~t-~~~~iy 271 (404)
T 3fg2_P 198 GIRMHYGVRATEIAAEGDRVTGVVLSDGNT--LPCDLVVVGVGVIPNV---EIAAAAGLPTAAGIIVDQQLLT-SDPHIS 271 (404)
T ss_dssp TCEEECSCCEEEEEEETTEEEEEEETTSCE--EECSEEEECCCEEECC---HHHHHTTCCBSSSEEECTTSBC-SSTTEE
T ss_pred CcEEEECCEEEEEEecCCcEEEEEeCCCCE--EEcCEEEECcCCccCH---HHHHhCCCCCCCCEEECCCccc-CCCCEE
Confidence 999999999999974 3454333456775 9999999999965543 4677788833334999999998 899999
Q ss_pred EcCcccccc
Q 007975 370 ALGDCATVN 378 (583)
Q Consensus 370 AiGD~a~~~ 378 (583)
|+|||+..+
T Consensus 272 a~GD~a~~~ 280 (404)
T 3fg2_P 272 AIGDCALFE 280 (404)
T ss_dssp ECGGGEEEE
T ss_pred Eeecceeec
Confidence 999999864
No 13
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=3.2e-38 Score=335.24 Aligned_cols=265 Identities=24% Similarity=0.392 Sum_probs=210.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC--eEEEEcCCCCCCCC--CchhhhccccCCCcccchhHHHHHHhCCCcEEEEEe
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEA 132 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~--~Vtlie~~~~~~~~--p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~ 132 (583)
++++|||||||+||+++|..|++.|+ +|+|||+++++.|. ++...+..+.. .+++... .+.+.+ ++++.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~--v~~~~~ 79 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKIRLD---CKRAPE--VEWLLG 79 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGSBCC---CTTSCS--CEEEET
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhhhHH---HHHHCC--CEEEcC
Confidence 45799999999999999999998777 59999999876664 22333444433 2222111 344556 445555
Q ss_pred -EEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCC-CCccccCcccCCHHHHHHHHHHHHHHHHHc
Q 007975 133 -ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT-PGVEENCNFLKEVEDAQRIRRNVIESFEKA 210 (583)
Q Consensus 133 -~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~i-pG~~~~~~~~~~~~~a~~l~~~l~~~~~~~ 210 (583)
+|+.+|++.+.|.+.++. ++.||+||+|||++|..+++ ||.+++.+.+++.+++..+++.+
T Consensus 80 ~~v~~i~~~~~~v~~~~g~----------~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~------- 142 (408)
T 2gqw_A 80 VTAQSFDPQAHTVALSDGR----------TLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL------- 142 (408)
T ss_dssp CCEEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTC-------
T ss_pred CEEEEEECCCCEEEECCCC----------EEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHh-------
Confidence 599999998999886543 79999999999999999999 99876677788888887765432
Q ss_pred CCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-ccHHHHHHHHHHHH
Q 007975 211 SLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFS 289 (583)
Q Consensus 211 ~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-~~~~~~~~~~~~L~ 289 (583)
..+++++|||||++|+|+|..+.++ +.+|+++++.+++++. +++++.+.+.+.|+
T Consensus 143 ----------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~ 198 (408)
T 2gqw_A 143 ----------RPQSRLLIVGGGVIGLELAATARTA--------------GVHVSLVETQPRLMSRAAPATLADFVARYHA 198 (408)
T ss_dssp ----------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTSCHHHHHHHHHHHH
T ss_pred ----------hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEEeCCcccccccCHHHHHHHHHHHH
Confidence 1356999999999999999999875 5799999999999985 89999999999999
Q ss_pred hCCCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc-CCCcceEeCCCCccCCCCCE
Q 007975 290 RDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEWLRVEGSDSI 368 (583)
Q Consensus 290 ~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~-~~~g~i~Vd~~l~~~~~~~V 368 (583)
+.||+++++++|++++++.+++ .+|++ +++|.||||+|.+++ + .+++.+++ .++| |.||+++|| +.|+|
T Consensus 199 ~~GV~i~~~~~v~~i~~~~v~~---~~g~~--i~~D~vi~a~G~~p~--~-~l~~~~gl~~~~g-i~Vd~~~~t-~~~~I 268 (408)
T 2gqw_A 199 AQGVDLRFERSVTGSVDGVVLL---DDGTR--IAADMVVVGIGVLAN--D-ALARAAGLACDDG-IFVDAYGRT-TCPDV 268 (408)
T ss_dssp HTTCEEEESCCEEEEETTEEEE---TTSCE--EECSEEEECSCEEEC--C-HHHHHHTCCBSSS-EECCTTCBC-SSTTE
T ss_pred HcCcEEEeCCEEEEEECCEEEE---CCCCE--EEcCEEEECcCCCcc--H-HHHHhCCCCCCCC-EEECCCCcc-CCCCE
Confidence 9999999999999998544444 34764 999999999996554 3 36677777 3345 999999998 89999
Q ss_pred EEcCcccccc
Q 007975 369 YALGDCATVN 378 (583)
Q Consensus 369 yAiGD~a~~~ 378 (583)
||+|||+..+
T Consensus 269 yA~GD~~~~~ 278 (408)
T 2gqw_A 269 YALGDVTRQR 278 (408)
T ss_dssp EECGGGEEEE
T ss_pred EEEEEEEEec
Confidence 9999999864
No 14
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=2.4e-37 Score=342.50 Aligned_cols=279 Identities=24% Similarity=0.431 Sum_probs=225.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC--CCeEEEEcCCCCCCCCC-chhhhccccCCC-c-ccchhHHHHHHhCCCcEEEEEe
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVEA-R-SIVEPVRNIVRKKNVDICFWEA 132 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~--g~~Vtlie~~~~~~~~p-~l~~~~~g~~~~-~-~i~~~~~~~~~~~~i~v~~~~~ 132 (583)
|++|||||||+||++||..|++. +++|+|||+++++.|.+ .++....+.... . .+...+..+.++.+++++ +++
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~ 79 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQRSALVLQTPESFKARFNVEVR-VKH 79 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCCGGGGBCCCHHHHHHHHCCEEE-TTE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCChHHhhccCHHHHHHhcCcEEE-ECC
Confidence 47999999999999999999865 89999999999988765 356665555432 2 244455666666775543 578
Q ss_pred EEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHcC
Q 007975 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKAS 211 (583)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~~ 211 (583)
+|+.+|++.+.+.+.+.. +++..++.||+||||||+.|..+++||.+ ...+.+++..++..+++.+..
T Consensus 80 ~V~~id~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~------ 148 (565)
T 3ntd_A 80 EVVAIDRAAKLVTVRRLL-----DGSEYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQM------ 148 (565)
T ss_dssp EEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHH------
T ss_pred EEEEEECCCCEEEEEecC-----CCCeEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhh------
Confidence 999999999999887532 11234799999999999999999999985 566778888888777765432
Q ss_pred CCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhC
Q 007975 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRD 291 (583)
Q Consensus 212 ~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~ 291 (583)
..+++++|||||++|+|+|..+.++ +.+|+++++.+++++.+++++.+.+.+.|++.
T Consensus 149 ---------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~ 205 (565)
T 3ntd_A 149 ---------NNVEHATVVGGGFIGLEMMESLHHL--------------GIKTTLLELADQVMTPVDREMAGFAHQAIRDQ 205 (565)
T ss_dssp ---------TTCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSCTTSCHHHHHHHHHHHHHT
T ss_pred ---------CCCCEEEEECCCHHHHHHHHHHHhc--------------CCcEEEEEcCCccchhcCHHHHHHHHHHHHHC
Confidence 2456999999999999999999876 57999999999999999999999999999999
Q ss_pred CCEEEeCCeEEEEeC---------------------CeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc--
Q 007975 292 GIDVKLGSMVVKVTD---------------------KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-- 348 (583)
Q Consensus 292 GV~v~~~~~V~~v~~---------------------~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~-- 348 (583)
||+++++++|++++. +.+.+.. .+|++ +++|.||+|+|.+++. .+++.+++
T Consensus 206 GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~g~~--i~~D~vi~a~G~~p~~---~l~~~~g~~~ 279 (565)
T 3ntd_A 206 GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL-SNGEL--LETDLLIMAIGVRPET---QLARDAGLAI 279 (565)
T ss_dssp TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE-TTSCE--EEESEEEECSCEEECC---HHHHHHTCCB
T ss_pred CCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEE-cCCCE--EEcCEEEECcCCccch---HHHHhCCccc
Confidence 999999999999964 3455544 45664 9999999999965543 35666776
Q ss_pred CCCcceEeCCCCccCCCCCEEEcCcccccc
Q 007975 349 TNRRALATDEWLRVEGSDSIYALGDCATVN 378 (583)
Q Consensus 349 ~~~g~i~Vd~~l~~~~~~~VyAiGD~a~~~ 378 (583)
+.+|+|.||+++|| +.|+|||+|||+..+
T Consensus 280 ~~~g~i~vd~~~~t-~~~~IyA~GD~~~~~ 308 (565)
T 3ntd_A 280 GELGGIKVNAMMQT-SDPAIYAVGDAVEEQ 308 (565)
T ss_dssp CTTSSBCCCTTCBC-SSTTEEECGGGBCEE
T ss_pred CCCCCEEECCCccc-CCCCEEEeeeeEeec
Confidence 67899999999998 899999999999764
No 15
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=1.9e-37 Score=344.66 Aligned_cols=282 Identities=25% Similarity=0.433 Sum_probs=229.9
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHhcCCC--CCeEEEEcCCCCCCCCC-chhhhccccCCCc--ccchhHHHHHHhCCCcE
Q 007975 53 EMGIKKKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVEAR--SIVEPVRNIVRKKNVDI 127 (583)
Q Consensus 53 ~~~~~~~~VVIIGgG~aGl~aA~~L~~~--g~~Vtlie~~~~~~~~p-~l~~~~~g~~~~~--~i~~~~~~~~~~~~i~v 127 (583)
.+.+++++|||||||+||++||..|++. +++|+|||++++++|.+ .++....+..... .+...+..+.++.++++
T Consensus 31 ~~~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~~~~~~~~~~~~~~~~gi~v 110 (588)
T 3ics_A 31 KDRWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDI 110 (588)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCGGGGBSSCHHHHHHHTTCEE
T ss_pred CCcccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCChHHhhccCHHHHHHhcCcEE
Confidence 3445678999999999999999999965 89999999999988865 4666666654432 25566777888888665
Q ss_pred EEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCc-c-ccCcccCCHHHHHHHHHHHHH
Q 007975 128 CFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGV-E-ENCNFLKEVEDAQRIRRNVIE 205 (583)
Q Consensus 128 ~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~-~-~~~~~~~~~~~a~~l~~~l~~ 205 (583)
+ +..+|+.++.+.+.+.+.+.. +++...+.||+||+|||+.|..+++||. + +..+..++..++..++..+..
T Consensus 111 ~-~~~~V~~id~~~~~v~v~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~ 184 (588)
T 3ics_A 111 R-VLSEVVKINKEEKTITIKNVT-----TNETYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDE 184 (588)
T ss_dssp E-CSEEEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHH
T ss_pred E-ECCEEEEEECCCCEEEEeecC-----CCCEEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhh
Confidence 3 578999999999999887522 1123478999999999999999999998 3 456778888888877766532
Q ss_pred HHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHH
Q 007975 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (583)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~ 285 (583)
..+++++|||||++|+|+|..+..+ +.+|+++++.+++++.+++++.+.+.
T Consensus 185 ---------------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~ 235 (588)
T 3ics_A 185 ---------------KKPRHATVIGGGFIGVEMVENLRER--------------GIEVTLVEMANQVMPPIDYEMAAYVH 235 (588)
T ss_dssp ---------------HCCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSCTTSCHHHHHHHH
T ss_pred ---------------cCCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCCcccccCCHHHHHHHH
Confidence 2456999999999999999999886 57999999999999999999999999
Q ss_pred HHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc--CCCcceEeCCCCc
Q 007975 286 EKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLR 361 (583)
Q Consensus 286 ~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~ 361 (583)
+.|++.||+++++++|++++. +.+++. +|++ +++|.||+|+|..++ + .+++.+++ +.+|+|.||+++|
T Consensus 236 ~~l~~~GV~i~~~~~v~~i~~~~~~v~~~---~g~~--i~~D~Vi~a~G~~p~--~-~~l~~~g~~~~~~g~i~vd~~~~ 307 (588)
T 3ics_A 236 EHMKNHDVELVFEDGVDALEENGAVVRLK---SGSV--IQTDMLILAIGVQPE--S-SLAKGAGLALGVRGTIKVNEKFQ 307 (588)
T ss_dssp HHHHHTTCEEECSCCEEEEEGGGTEEEET---TSCE--EECSEEEECSCEEEC--C-HHHHHTTCCBCGGGCBCCCTTSB
T ss_pred HHHHHcCCEEEECCeEEEEecCCCEEEEC---CCCE--EEcCEEEEccCCCCC--h-HHHHhcCceEcCCCCEEECCccc
Confidence 999999999999999999986 455543 4764 999999999996554 3 35677776 5689999999999
Q ss_pred cCCCCCEEEcCcccccc
Q 007975 362 VEGSDSIYALGDCATVN 378 (583)
Q Consensus 362 ~~~~~~VyAiGD~a~~~ 378 (583)
| +.|+|||+|||+..+
T Consensus 308 t-~~~~IyA~GD~~~~~ 323 (588)
T 3ics_A 308 T-SDPHIYAIGDAIEVK 323 (588)
T ss_dssp C-SSTTEEECGGGBCEE
T ss_pred c-CCCCEEEeeeeeecc
Confidence 9 899999999999754
No 16
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1.8e-37 Score=335.85 Aligned_cols=280 Identities=24% Similarity=0.396 Sum_probs=203.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC--CCeEEEEcCCCCCCCCC-chhhhccccCCC-ccc-------chhHHHHHHhCCCc
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVEA-RSI-------VEPVRNIVRKKNVD 126 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~--g~~Vtlie~~~~~~~~p-~l~~~~~g~~~~-~~i-------~~~~~~~~~~~~i~ 126 (583)
+++|||||||+||++||..|++. +++|+|||+++++.|.+ .++.+..+.... ..+ ......+.+..+++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 57999999999999999999965 99999999999987754 355555554332 222 22333344446655
Q ss_pred EEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHH
Q 007975 127 ICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIE 205 (583)
Q Consensus 127 v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~ 205 (583)
+. .+++|+.+|++.+.+.+.+.. +++...+.||+||+|||+.|..+++||.+ ++.+.+++.+++..+++.+..
T Consensus 83 ~~-~~~~V~~id~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~~ 156 (472)
T 3iwa_A 83 AL-VETRAHAIDRAAHTVEIENLR-----TGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA 156 (472)
T ss_dssp EE-CSEEEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCCT
T ss_pred EE-ECCEEEEEECCCCEEEEeecC-----CCCEEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhhc
Confidence 42 578999999999999887521 11234799999999999999999999985 556778888888776654311
Q ss_pred HHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC-cccHHHHHHH
Q 007975 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFDKRITAFA 284 (583)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~-~~~~~~~~~~ 284 (583)
..+++++|||+|++|+|+|..+..+. +.+|+++++.+++++ .+++.+.+.+
T Consensus 157 ---------------~~~~~vvViGgG~~g~e~A~~l~~~~-------------g~~Vtlv~~~~~~l~~~~~~~~~~~l 208 (472)
T 3iwa_A 157 ---------------GEVSKAVIVGGGFIGLEMAVSLADMW-------------GIDTTVVELADQIMPGFTSKSLSQML 208 (472)
T ss_dssp ---------------TSCSEEEEECCSHHHHHHHHHHHHHH-------------CCEEEEECSSSSSSTTTSCHHHHHHH
T ss_pred ---------------CCCCEEEEECCCHHHHHHHHHHHHhc-------------CCcEEEEEccCcccccccCHHHHHHH
Confidence 23569999999999999999998761 369999999999999 8999999999
Q ss_pred HHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc--CCCcceEeCCCC
Q 007975 285 EEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWL 360 (583)
Q Consensus 285 ~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l 360 (583)
.+.+++.||+++++++|++++. +.+++.. .+|++ +++|.||+|+|..++ + .+++.+++ +.+|+|.||+++
T Consensus 209 ~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~-~~g~~--i~aD~Vv~a~G~~p~--~-~l~~~~gl~~~~~g~i~vd~~~ 282 (472)
T 3iwa_A 209 RHDLEKNDVVVHTGEKVVRLEGENGKVARVI-TDKRT--LDADLVILAAGVSPN--T-QLARDAGLELDPRGAIIVDTRM 282 (472)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSSBEEEEE-ESSCE--EECSEEEECSCEEEC--C-HHHHHHTCCBCTTCCEECCTTC
T ss_pred HHHHHhcCCEEEeCCEEEEEEccCCeEEEEE-eCCCE--EEcCEEEECCCCCcC--H-HHHHhCCccCCCCCCEEECCCc
Confidence 9999999999999999999975 4454433 34764 999999999996554 3 35666776 678999999999
Q ss_pred ccCCCCCEEEcCcccccc
Q 007975 361 RVEGSDSIYALGDCATVN 378 (583)
Q Consensus 361 ~~~~~~~VyAiGD~a~~~ 378 (583)
|| +.|+|||+|||+..+
T Consensus 283 ~t-~~~~Iya~GD~~~~~ 299 (472)
T 3iwa_A 283 RT-SDPDIFAGGDCVTIP 299 (472)
T ss_dssp BC-SSTTEEECGGGEEEE
T ss_pred cc-CCCCEEEeccceecc
Confidence 98 899999999999764
No 17
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=4.9e-37 Score=328.41 Aligned_cols=272 Identities=24% Similarity=0.440 Sum_probs=216.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC--eEEEEcCCCCCCCC--CchhhhccccCCCcccchhHHHHHHhCCCcEEEEE-e
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFT--PLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWE-A 132 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~--~Vtlie~~~~~~~~--p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~-~ 132 (583)
+++|||||||+||+++|..|++.|+ +|+|||+++.+.|. ++...+..+....+.+...+.+.+++.+ ++++. .
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~~~ 81 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAAQN--IQLLGGT 81 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHHTT--EEEECSC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHhCC--CEEEeCC
Confidence 5799999999999999999998887 79999999876653 2333344454445555555567777777 44544 5
Q ss_pred EEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-cc---CcccCCHHHHHHHHHHHHHHHH
Q 007975 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-EN---CNFLKEVEDAQRIRRNVIESFE 208 (583)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~---~~~~~~~~~a~~l~~~l~~~~~ 208 (583)
+|+.++++.+.|.+.++. ++.||+||+|||+.|+.+++||.+ ++ .+.+++.+++..+++.+
T Consensus 82 ~v~~i~~~~~~v~~~~g~----------~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l----- 146 (431)
T 1q1r_A 82 QVTAINRDRQQVILSDGR----------ALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL----- 146 (431)
T ss_dssp CEEEEETTTTEEEETTSC----------EEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTC-----
T ss_pred EEEEEECCCCEEEECCCC----------EEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHh-----
Confidence 799999988888886543 799999999999999999999975 33 56678888887766542
Q ss_pred HcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-ccHHHHHHHHHH
Q 007975 209 KASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEK 287 (583)
Q Consensus 209 ~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-~~~~~~~~~~~~ 287 (583)
..+++++|||||++|+|+|..+.++ +.+|+++++.+++++. +++++.+.+.+.
T Consensus 147 ------------~~~~~vvViGgG~~g~E~A~~l~~~--------------G~~Vtlv~~~~~~l~~~~~~~~~~~l~~~ 200 (431)
T 1q1r_A 147 ------------IADNRLVVIGGGYIGLEVAATAIKA--------------NMHVTLLDTAARVLERVTAPPVSAFYEHL 200 (431)
T ss_dssp ------------CTTCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSTTTTTSCHHHHHHHHHH
T ss_pred ------------hcCCeEEEECCCHHHHHHHHHHHhC--------------CCEEEEEEeCCccccchhhHHHHHHHHHH
Confidence 1346999999999999999999875 5799999999999985 899999999999
Q ss_pred HHhCCCEEEeCCeEEEEeC----CeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCCCCccC
Q 007975 288 FSRDGIDVKLGSMVVKVTD----KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVE 363 (583)
Q Consensus 288 L~~~GV~v~~~~~V~~v~~----~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~ 363 (583)
+++.||+++++++|++++. +.+......+|++ +++|.||+|+|++++ + .+++.+++..++.|.||+++||
T Consensus 201 l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~--i~~D~Vv~a~G~~p~--~-~l~~~~gl~~~~gi~Vd~~~~t- 274 (431)
T 1q1r_A 201 HREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTR--LPADLVIAGIGLIPN--C-ELASAAGLQVDNGIVINEHMQT- 274 (431)
T ss_dssp HHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCE--EECSEEEECCCEEEC--C-HHHHHTTCCBSSSEECCTTSBC-
T ss_pred HHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCE--EEcCEEEECCCCCcC--c-chhhccCCCCCCCEEECCCccc-
Confidence 9999999999999999974 3443223345764 999999999996544 3 4677778732344999999998
Q ss_pred CCCCEEEcCcccccc
Q 007975 364 GSDSIYALGDCATVN 378 (583)
Q Consensus 364 ~~~~VyAiGD~a~~~ 378 (583)
+.|+|||+|||+..+
T Consensus 275 s~~~IyA~GD~~~~~ 289 (431)
T 1q1r_A 275 SDPLIMAVGDCARFH 289 (431)
T ss_dssp SSTTEEECGGGEEEE
T ss_pred CCCCEEEEEeEEEEc
Confidence 899999999999764
No 18
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=7.4e-37 Score=329.26 Aligned_cols=276 Identities=22% Similarity=0.402 Sum_probs=220.5
Q ss_pred CeEEEECCcHHHHHHHHhcCCC--CCeEEEEcCCCCCCCCCc-hhhhccccC---CCcccchhHHHHHHhCCCcEEEEEe
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTPL-LPSVTCGTV---EARSIVEPVRNIVRKKNVDICFWEA 132 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~--g~~Vtlie~~~~~~~~p~-l~~~~~g~~---~~~~i~~~~~~~~~~~~i~v~~~~~ 132 (583)
++|||||||+||+++|..|++. |++|+|||+++.+.+.+. ++.+..+.. +++++...+.+.+.+.++++. ...
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~gv~~~-~~~ 79 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYSSPEELSNLGANVQ-MRH 79 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSCCHHHHHHTTCEEE-ESE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhcCHHHHHHcCCEEE-eCC
Confidence 4899999999999999999865 999999999987766543 444444443 355666667777888886542 567
Q ss_pred EEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHcC
Q 007975 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKAS 211 (583)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~~ 211 (583)
+|..++.+.+.|.+.+.. +++..++.||+||+|||++|..+++||.+ ++.+.+++.+++..+++.+
T Consensus 80 ~v~~i~~~~~~v~v~~~~-----~g~~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~-------- 146 (452)
T 2cdu_A 80 QVTNVDPETKTIKVKDLI-----TNEEKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEA-------- 146 (452)
T ss_dssp EEEEEEGGGTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHG--------
T ss_pred EEEEEEcCCCEEEEEecC-----CCceEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHh--------
Confidence 799999988888886521 11123799999999999999999999986 4567788888887776542
Q ss_pred CCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC-cccHHHHHHHHHHHHh
Q 007975 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFDKRITAFAEEKFSR 290 (583)
Q Consensus 212 ~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~-~~~~~~~~~~~~~L~~ 290 (583)
..+++++|||||++|+|+|..+.++ +.+|+++++.+++++ .+++++.+.+.+.|++
T Consensus 147 ---------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~ 203 (452)
T 2cdu_A 147 ---------PKAKTITIIGSGYIGAELAEAYSNQ--------------NYNVNLIDGHERVLYKYFDKEFTDILAKDYEA 203 (452)
T ss_dssp ---------GGCSEEEEECCSHHHHHHHHHHHTT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHHH
T ss_pred ---------ccCCeEEEECcCHHHHHHHHHHHhc--------------CCEEEEEEcCCchhhhhhhhhHHHHHHHHHHH
Confidence 2456999999999999999998875 579999999999999 6999999999999999
Q ss_pred CCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHh-CcCCCcceEeCCCCccCCCCC
Q 007975 291 DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALATDEWLRVEGSDS 367 (583)
Q Consensus 291 ~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~-~~~~~g~i~Vd~~l~~~~~~~ 367 (583)
.||+++++++|++++. +.+..... +|++ +++|.||||+|.+++. .+++.. .++.+|+|.||+++|| +.|+
T Consensus 204 ~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~--i~~D~vv~a~G~~p~~---~ll~~~l~~~~~G~i~Vd~~~~t-~~~~ 276 (452)
T 2cdu_A 204 HGVNLVLGSKVAAFEEVDDEIITKTL-DGKE--IKSDIAILCIGFRPNT---ELLKGKVAMLDNGAIITDEYMHS-SNRD 276 (452)
T ss_dssp TTCEEEESSCEEEEEEETTEEEEEET-TSCE--EEESEEEECCCEEECC---GGGTTTSCBCTTSCBCCCTTSBC-SSTT
T ss_pred CCCEEEcCCeeEEEEcCCCeEEEEEe-CCCE--EECCEEEECcCCCCCH---HHHHHhhhcCCCCCEEECCCcCc-CCCC
Confidence 9999999999999974 45543333 4654 9999999999965543 244444 3367899999999999 8999
Q ss_pred EEEcCcccccc
Q 007975 368 IYALGDCATVN 378 (583)
Q Consensus 368 VyAiGD~a~~~ 378 (583)
|||+|||+..+
T Consensus 277 IyA~GD~~~~~ 287 (452)
T 2cdu_A 277 IFAAGDSAAVH 287 (452)
T ss_dssp EEECSTTBCEE
T ss_pred EEEcceEEEec
Confidence 99999999864
No 19
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=9.5e-37 Score=331.61 Aligned_cols=276 Identities=21% Similarity=0.341 Sum_probs=218.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC---CeEEEEcCCCCCCCCCc-hhhhcccc-CCCcccchhHHHHHHhCCCcEEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPS---YDVQVISPRNYFAFTPL-LPSVTCGT-VEARSIVEPVRNIVRKKNVDICFWE 131 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g---~~Vtlie~~~~~~~~p~-l~~~~~g~-~~~~~i~~~~~~~~~~~~i~v~~~~ 131 (583)
++++|||||||+||+++|..|++.| ++|+|||+++.+.+.+. ++.+..+. ..++++.....+.+++.++++. ..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~-~~ 112 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSDKEELESLGAKVY-ME 112 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCCHHHHHHTTCEEE-TT
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcCHHHHHhCCCEEE-eC
Confidence 3589999999999999999999766 99999999987766543 33334443 3345566666777888885542 47
Q ss_pred eEEEEEecCCCEEEEe-cCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc------------ccCcccCCHHHHHH
Q 007975 132 AECFKIDAENKKVYCR-SSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE------------ENCNFLKEVEDAQR 198 (583)
Q Consensus 132 ~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~------------~~~~~~~~~~~a~~ 198 (583)
.+|+.++.+.+.|.+. ++. ..++.||+||||||++|..+++||.+ ++.+.+++++++..
T Consensus 113 ~~v~~i~~~~~~v~v~~~g~--------~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~~~~ 184 (490)
T 2bc0_A 113 SPVQSIDYDAKTVTALVDGK--------NHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQNSAD 184 (490)
T ss_dssp CCEEEEETTTTEEEEEETTE--------EEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHHHHH
T ss_pred CEEEEEECCCCEEEEEeCCc--------EEEEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHHHHH
Confidence 7799999999998886 421 13799999999999999999999975 35677788888877
Q ss_pred HHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC-ccc
Q 007975 199 IRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFD 277 (583)
Q Consensus 199 l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~-~~~ 277 (583)
+++.+. ...+++++|||||++|+|+|..++++ +.+|+++++.+++++ .++
T Consensus 185 ~~~~~~---------------~~~~~~vvVIGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~ 235 (490)
T 2bc0_A 185 VIAKLE---------------NKDIKRVAVVGAGYIGVELAEAFQRK--------------GKEVVLIDVVDTCLAGYYD 235 (490)
T ss_dssp HHHHTT---------------STTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSC
T ss_pred HHHHhh---------------hcCCceEEEECCCHHHHHHHHHHHHC--------------CCeEEEEEcccchhhhHHH
Confidence 765421 02456999999999999999999876 579999999999999 699
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeEEEEeCCe-EE-EEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHh-CcCCCcce
Q 007975 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTDKE-IF-TKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRAL 354 (583)
Q Consensus 278 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~-v~-~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~-~~~~~g~i 354 (583)
+++.+.+.+.|++.||+++++++|++++.++ +. +.. +|++ +++|.||||+|.+++. .+++.. .++.+|+|
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~--~g~~--i~~D~Vi~a~G~~p~~---~ll~~~l~~~~~G~I 308 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT--DKNE--YDVDMVILAVGFRPNT---TLGNGKIDLFRNGAF 308 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE--SSCE--EECSEEEECCCEEECC---GGGTTCSCBCTTSCB
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE--CCcE--EECCEEEECCCCCcCh---HHHHhhhccCCCCCE
Confidence 9999999999999999999999999998643 32 222 3654 9999999999965543 244443 33678999
Q ss_pred EeCCCCccCCCCCEEEcCcccccc
Q 007975 355 ATDEWLRVEGSDSIYALGDCATVN 378 (583)
Q Consensus 355 ~Vd~~l~~~~~~~VyAiGD~a~~~ 378 (583)
.||+++|| +.|+|||+|||+..+
T Consensus 309 ~Vd~~~~t-~~~~IyA~GD~~~~~ 331 (490)
T 2bc0_A 309 LVNKRQET-SIPGVYAIGDCATIY 331 (490)
T ss_dssp CCCTTCBC-SSTTEEECGGGBCEE
T ss_pred EECCCccc-CCCCEEEeeeeEEec
Confidence 99999999 899999999999764
No 20
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=8.9e-37 Score=328.35 Aligned_cols=274 Identities=27% Similarity=0.447 Sum_probs=204.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCC--CCeEEEEcCCCCCCCCC-chhhhccccCCCcccchhHH-HHHHhCCCcEEEEE-
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTP-LLPSVTCGTVEARSIVEPVR-NIVRKKNVDICFWE- 131 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~--g~~Vtlie~~~~~~~~p-~l~~~~~g~~~~~~i~~~~~-~~~~~~~i~v~~~~- 131 (583)
++++|||||||+||+++|..|++. +++|+|||+++++.+.+ .++.+..+....+++..... .+.++.+++ ++.
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~gi~--v~~~ 79 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKKRGID--LHLN 79 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC------------------------CTHHHHTTCE--EETT
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHhcCcE--EEec
Confidence 457999999999999999999865 89999999999887765 45555555444444444333 333567754 444
Q ss_pred eEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHc
Q 007975 132 AECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKA 210 (583)
Q Consensus 132 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~ 210 (583)
.+|+.++.+.+.|.+.++ ..++.||+||+|||+.|+.+++||.+ ++.+..++.+++..+++.+.
T Consensus 80 ~~v~~i~~~~~~v~~~~g---------~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~------ 144 (449)
T 3kd9_A 80 AEVIEVDTGYVRVRENGG---------EKSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYME------ 144 (449)
T ss_dssp CEEEEECSSEEEEECSSS---------EEEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHS------
T ss_pred CEEEEEecCCCEEEECCc---------eEEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHH------
Confidence 499999988777755322 23799999999999999999999986 45666778888877665431
Q ss_pred CCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-ccHHHHHHHHHHHH
Q 007975 211 SLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFS 289 (583)
Q Consensus 211 ~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-~~~~~~~~~~~~L~ 289 (583)
...+++++|||||++|+|+|..+.++ +.+|+++++.+++++. +++++.+.+.+.|+
T Consensus 145 ---------~~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~ 201 (449)
T 3kd9_A 145 ---------KYKVENVVIIGGGYIGIEMAEAFAAQ--------------GKNVTMIVRGERVLRRSFDKEVTDILEEKLK 201 (449)
T ss_dssp ---------SSCCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTSCHHHHHHHHHHHT
T ss_pred ---------hcCCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEcCCccchhhcCHHHHHHHHHHHH
Confidence 01456999999999999999999876 5799999999999997 99999999999999
Q ss_pred hCCCEEEeCCeEEEEeCCe-EEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc--CCCcceEeCCCCccCCCC
Q 007975 290 RDGIDVKLGSMVVKVTDKE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSD 366 (583)
Q Consensus 290 ~~GV~v~~~~~V~~v~~~~-v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~ 366 (583)
+. |++++++.|.+++.+. +.... .+|++ +++|.||||+|.+++ + .+++.+++ +.+|+|.||+++|| +.|
T Consensus 202 ~~-v~i~~~~~v~~i~~~~~v~~v~-~~g~~--i~~D~Vv~a~G~~p~--~-~l~~~~gl~~~~~G~i~vd~~~~t-~~~ 273 (449)
T 3kd9_A 202 KH-VNLRLQEITMKIEGEERVEKVV-TDAGE--YKAELVILATGIKPN--I-ELAKQLGVRIGETGAIWTNEKMQT-SVE 273 (449)
T ss_dssp TT-SEEEESCCEEEEECSSSCCEEE-ETTEE--EECSEEEECSCEEEC--C-HHHHHTTCCBCTTSSBCCCTTCBC-SST
T ss_pred hC-cEEEeCCeEEEEeccCcEEEEE-eCCCE--EECCEEEEeeCCccC--H-HHHHhCCccCCCCCCEEECCCCcc-CCC
Confidence 99 9999999999998653 32222 23654 999999999996544 3 45677776 67889999999998 899
Q ss_pred CEEEcCcccccc
Q 007975 367 SIYALGDCATVN 378 (583)
Q Consensus 367 ~VyAiGD~a~~~ 378 (583)
+|||+|||+..+
T Consensus 274 ~IyA~GD~~~~~ 285 (449)
T 3kd9_A 274 NVYAAGDVAETR 285 (449)
T ss_dssp TEEECSTTBCEE
T ss_pred CEEEeeeeeeec
Confidence 999999999754
No 21
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.8e-37 Score=330.69 Aligned_cols=273 Identities=18% Similarity=0.332 Sum_probs=207.6
Q ss_pred CeEEEECCcHHHHHHHHhcCCC--CCeEEEEcCCCCCCCCCc-hhhhccccC-CCcccchhHHHHHHhCCCcEEEEEeEE
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTPL-LPSVTCGTV-EARSIVEPVRNIVRKKNVDICFWEAEC 134 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~--g~~Vtlie~~~~~~~~p~-l~~~~~g~~-~~~~i~~~~~~~~~~~~i~v~~~~~~v 134 (583)
++|||||||+||++||..|++. +++|+|||++++++|.+. ++.+..+.. ...++.....+.+.+.++++. .+.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~-~~~~V 81 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYITEEELRRQKIQLL-LNREV 81 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCCCHHHHHHTTEEEE-CSCEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcCCHHHHHHCCCEEE-ECCEE
Confidence 6999999999999999999965 899999999998887653 444444443 344555556677778885542 57899
Q ss_pred EEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHcCCC
Q 007975 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLP 213 (583)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 213 (583)
+.+|++.+.+.+.... +...+.||+||+|||++|..+++||.+ +..+..++.+++..+.+..
T Consensus 82 ~~id~~~~~v~v~~~~-------~~~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~---------- 144 (452)
T 3oc4_A 82 VAMDVENQLIAWTRKE-------EQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLL---------- 144 (452)
T ss_dssp EEEETTTTEEEEEETT-------EEEEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHH----------
T ss_pred EEEECCCCEEEEEecC-------ceEEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHH----------
Confidence 9999999998875111 124899999999999999999999986 4455555555555443321
Q ss_pred CCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-ccHHHHHHHHHHHHhCC
Q 007975 214 NLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSRDG 292 (583)
Q Consensus 214 ~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-~~~~~~~~~~~~L~~~G 292 (583)
..+++++|||+|++|+|+|..+.++ +.+|+++++.+++++. +++++.+.+.+.|++.|
T Consensus 145 -------~~~~~vvViGgG~~g~E~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l~~~G 203 (452)
T 3oc4_A 145 -------ENSQTVAVIGAGPIGMEAIDFLVKM--------------KKTVHVFESLENLLPKYFDKEMVAEVQKSLEKQA 203 (452)
T ss_dssp -------HTCSEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTCCHHHHHHHHHHHHTTT
T ss_pred -------hcCCEEEEECCCHHHHHHHHHHHhC--------------CCeEEEEEccCccccccCCHHHHHHHHHHHHHcC
Confidence 2456999999999999999999876 5799999999999996 89999999999999999
Q ss_pred CEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHH-hCcCCCcceEeCCCCccCCCCCEE
Q 007975 293 IDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQTNRRALATDEWLRVEGSDSIY 369 (583)
Q Consensus 293 V~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~-~~~~~~g~i~Vd~~l~~~~~~~Vy 369 (583)
|+++++++|++++ ++++.+.. ++| + +++|.||+|+|.+++.. +++. +.++.+|+|.||+++|| +.|+||
T Consensus 204 V~i~~~~~v~~i~~~~~~v~v~~-~~g-~--i~aD~Vv~A~G~~p~~~---~l~~~~~~~~~g~i~vd~~~~t-~~~~Iy 275 (452)
T 3oc4_A 204 VIFHFEETVLGIEETANGIVLET-SEQ-E--ISCDSGIFALNLHPQLA---YLDKKIQRNLDQTIAVDAYLQT-SVPNVF 275 (452)
T ss_dssp EEEEETCCEEEEEECSSCEEEEE-SSC-E--EEESEEEECSCCBCCCS---SCCTTSCBCTTSCBCCCTTCBC-SSTTEE
T ss_pred CEEEeCCEEEEEEccCCeEEEEE-CCC-E--EEeCEEEECcCCCCChH---HHHhhhccCCCCCEEECcCccC-CCCCEE
Confidence 9999999999997 45564443 345 3 99999999999766542 3222 34477899999999999 899999
Q ss_pred EcCcccccc
Q 007975 370 ALGDCATVN 378 (583)
Q Consensus 370 AiGD~a~~~ 378 (583)
|+|||+..+
T Consensus 276 A~GD~~~~~ 284 (452)
T 3oc4_A 276 AIGDCISVM 284 (452)
T ss_dssp ECGGGBCEE
T ss_pred EEEeeEEec
Confidence 999999764
No 22
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=3.6e-36 Score=326.17 Aligned_cols=279 Identities=23% Similarity=0.425 Sum_probs=217.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCC--CCCeEEEEcCCCCCCCCCc-hhhhccccC-CCcccchhHHHHH-HhCCCcEEEEEe
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFTPL-LPSVTCGTV-EARSIVEPVRNIV-RKKNVDICFWEA 132 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~--~g~~Vtlie~~~~~~~~p~-l~~~~~g~~-~~~~i~~~~~~~~-~~~~i~v~~~~~ 132 (583)
+++|||||||+||+++|..|++ .|.+|+|||+++.+.+.+. ++.+..+.. +.+++.....+.+ +..++++. ...
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~gv~~~-~~~ 114 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAK-VRH 114 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSSCGGGGBSSCHHHHHHTTCCEEE-SSE
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcCCHHHhhhcCHHHHHhhcCCEEE-eCC
Confidence 5799999999999999999986 4899999999988776543 555544433 2444444444455 44575432 357
Q ss_pred EEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHcC
Q 007975 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKAS 211 (583)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~~ 211 (583)
+|+.++.+.+.|.+.+.. +++..++.||+||+|||+.|..+++||.+ ++.+.+++.+++.++++.+.+
T Consensus 115 ~v~~i~~~~~~v~v~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~------ 183 (480)
T 3cgb_A 115 EVTKVDTEKKIVYAEHTK-----TKDVFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLET------ 183 (480)
T ss_dssp EEEEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHS------
T ss_pred EEEEEECCCCEEEEEEcC-----CCceEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhh------
Confidence 899999999998887511 11123699999999999999999999986 456778889998888766421
Q ss_pred CCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhC
Q 007975 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRD 291 (583)
Q Consensus 212 ~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~ 291 (583)
..+++++|||||++|+|+|..+.++ +.+|+++++.+++++.+++++.+.+.+.+++.
T Consensus 184 ---------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~ 240 (480)
T 3cgb_A 184 ---------NKVEDVTIIGGGAIGLEMAETFVEL--------------GKKVRMIERNDHIGTIYDGDMAEYIYKEADKH 240 (480)
T ss_dssp ---------SCCCEEEEECCHHHHHHHHHHHHHT--------------TCEEEEECCGGGTTSSSCHHHHHHHHHHHHHT
T ss_pred ---------cCCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEEeCCchhhcCCHHHHHHHHHHHHHc
Confidence 1456999999999999999999875 57999999999999999999999999999999
Q ss_pred CCEEEeCCeEEEEeCC-eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc--CCCcceEeCCCCccCCCCCE
Q 007975 292 GIDVKLGSMVVKVTDK-EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSDSI 368 (583)
Q Consensus 292 GV~v~~~~~V~~v~~~-~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~~V 368 (583)
||+++++++|++++.+ .+.....+ +. ++++|.||+|+|..++. .+++.+++ +.+|+|.||+++|| +.|+|
T Consensus 241 Gv~i~~~~~v~~i~~~~~v~~v~~~-~~--~i~~D~vi~a~G~~p~~---~~l~~~g~~~~~~G~I~Vd~~~~t-s~p~I 313 (480)
T 3cgb_A 241 HIEILTNENVKAFKGNERVEAVETD-KG--TYKADLVLVSVGVKPNT---DFLEGTNIRTNHKGAIEVNAYMQT-NVQDV 313 (480)
T ss_dssp TCEEECSCCEEEEEESSBEEEEEET-TE--EEECSEEEECSCEEESC---GGGTTSCCCBCTTSCBCCCTTSBC-SSTTE
T ss_pred CcEEEcCCEEEEEEcCCcEEEEEEC-CC--EEEcCEEEECcCCCcCh---HHHHhCCcccCCCCCEEECCCccC-CCCCE
Confidence 9999999999999754 34322222 43 39999999999965543 35556665 56789999999998 79999
Q ss_pred EEcCcccccc
Q 007975 369 YALGDCATVN 378 (583)
Q Consensus 369 yAiGD~a~~~ 378 (583)
||+|||+..+
T Consensus 314 yA~GD~~~~~ 323 (480)
T 3cgb_A 314 YAAGDCATHY 323 (480)
T ss_dssp EECGGGBCEE
T ss_pred EEeeeEEEec
Confidence 9999999763
No 23
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=1.3e-35 Score=312.67 Aligned_cols=268 Identities=21% Similarity=0.391 Sum_probs=213.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCC--CeEEEEcCCCCCCC-CCchhhhccccCCCcccch-hHHHHHHhCCCcEEEE-Ee
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAF-TPLLPSVTCGTVEARSIVE-PVRNIVRKKNVDICFW-EA 132 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g--~~Vtlie~~~~~~~-~p~l~~~~~g~~~~~~i~~-~~~~~~~~~~i~v~~~-~~ 132 (583)
+++|||||||+||+++|..|++.| .+|+|||+++...+ .++++....+.....++.. .+..++++.+++ ++ ..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~ 81 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKDADGLAMAEPGAMAEQLNAR--ILTHT 81 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCCHHHHEEECHHHHHHHTTCE--EECSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCCHHHhhccCHHHHHHhCCcE--EEeCC
Confidence 479999999999999999999887 56999999875443 3445544444333444443 456667777744 44 56
Q ss_pred EEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHcC
Q 007975 133 ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKAS 211 (583)
Q Consensus 133 ~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~~ 211 (583)
+|+.++.+.+.|.+.+ .++.||+||+|||+.|..|++||.+ ++.+..++..++..++..+
T Consensus 82 ~v~~i~~~~~~v~~~~-----------~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~-------- 142 (384)
T 2v3a_A 82 RVTGIDPGHQRIWIGE-----------EEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAA-------- 142 (384)
T ss_dssp CCCEEEGGGTEEEETT-----------EEEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHH--------
T ss_pred EEEEEECCCCEEEECC-----------cEEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhh--------
Confidence 7999999888888742 1799999999999999999999976 5677888888887766553
Q ss_pred CCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-ccHHHHHHHHHHHHh
Q 007975 212 LPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRITAFAEEKFSR 290 (583)
Q Consensus 212 ~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-~~~~~~~~~~~~L~~ 290 (583)
..+++++|||+|++|+|+|..+..+ +.+|+++++.+++++. +++.+.+.+.+.+++
T Consensus 143 ---------~~~~~v~ViGgG~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~~~~~~~~~~~l~~~l~~ 199 (384)
T 2v3a_A 143 ---------AGKRRVLLLGAGLIGCEFANDLSSG--------------GYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEG 199 (384)
T ss_dssp ---------TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSSSTTTSCHHHHHHHHHHHHT
T ss_pred ---------ccCCeEEEECCCHHHHHHHHHHHhC--------------CCeEEEEecCcchhhcccCHHHHHHHHHHHHH
Confidence 1346999999999999999999876 5799999999999987 488999999999999
Q ss_pred CCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc-CCCcceEeCCCCccCCCCC
Q 007975 291 DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEWLRVEGSDS 367 (583)
Q Consensus 291 ~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~-~~~g~i~Vd~~l~~~~~~~ 367 (583)
.||+++++++|++++. +.+.+.. .+|++ +++|.||+|+|.+++ + .+++.+++ .++| |.||+++|| +.|+
T Consensus 200 ~gv~i~~~~~v~~i~~~~~~~~v~~-~~g~~--i~~d~vv~a~G~~p~--~-~l~~~~g~~~~~g-i~vd~~~~t-~~~~ 271 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGEGLEAHL-SDGEV--IPCDLVVSAVGLRPR--T-ELAFAAGLAVNRG-IVVDRSLRT-SHAN 271 (384)
T ss_dssp TTCEEEESCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECSCEEEC--C-HHHHHTTCCBSSS-EEECTTCBC-SSTT
T ss_pred cCCEEEeCCEEEEEEecCCEEEEEE-CCCCE--EECCEEEECcCCCcC--H-HHHHHCCCCCCCC-EEECCCCCC-CCCC
Confidence 9999999999999963 4455543 45764 999999999995544 4 36677777 3456 999999997 8999
Q ss_pred EEEcCccccc
Q 007975 368 IYALGDCATV 377 (583)
Q Consensus 368 VyAiGD~a~~ 377 (583)
|||+|||+..
T Consensus 272 IyA~GD~~~~ 281 (384)
T 2v3a_A 272 IYALGDCAEV 281 (384)
T ss_dssp EEECGGGEEE
T ss_pred EEEeeeeeeE
Confidence 9999999864
No 24
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=7.4e-36 Score=321.00 Aligned_cols=277 Identities=21% Similarity=0.378 Sum_probs=217.9
Q ss_pred CeEEEECCcHHHHHHHHhcCCC--CCeEEEEcCCCCCCCCCc-hhhhccccC-CCcccchhHHHHHHhCCCcEEEEEeEE
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFAFTPL-LPSVTCGTV-EARSIVEPVRNIVRKKNVDICFWEAEC 134 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~--g~~Vtlie~~~~~~~~p~-l~~~~~g~~-~~~~i~~~~~~~~~~~~i~v~~~~~~v 134 (583)
++|||||||+||+++|..|++. |++|+|||+++++++.+. ++.+..+.. +.+++...+.+.+++.++++. ...+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~-~~~~v 79 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRYMTGEKMESRGVNVF-SNTEI 79 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBSCCHHHHHHTTCEEE-ETEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhcCCHHHHHHCCCEEE-ECCEE
Confidence 4899999999999999999865 999999999988776553 444444443 345566666777888886552 57889
Q ss_pred EEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHcCCC
Q 007975 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLP 213 (583)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 213 (583)
+.++.+.+.|.+.+.. +++..++.||+||||||++|..|++||.+ ++.+.+++.+++..+++.+.+
T Consensus 80 ~~i~~~~~~v~~~~~~-----~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~-------- 146 (447)
T 1nhp_A 80 TAIQPKEHQVTVKDLV-----SGEERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTVD-------- 146 (447)
T ss_dssp EEEETTTTEEEEEETT-----TCCEEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHTC--------
T ss_pred EEEeCCCCEEEEEecC-----CCceEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhhh--------
Confidence 9999999999886521 11123589999999999999999999986 456777788888877665310
Q ss_pred CCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC-cccHHHHHHHHHHHHhCC
Q 007975 214 NLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-MFDKRITAFAEEKFSRDG 292 (583)
Q Consensus 214 ~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~-~~~~~~~~~~~~~L~~~G 292 (583)
..+++++|||+|++|+|+|..+.++ +.+|+++++.+++++ .+++++.+.+.+.+++.|
T Consensus 147 -------~~~~~vvIiG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~g 205 (447)
T 1nhp_A 147 -------PEVNNVVVIGSGYIGIEAAEAFAKA--------------GKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANN 205 (447)
T ss_dssp -------TTCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTT
T ss_pred -------cCCCeEEEECCCHHHHHHHHHHHHC--------------CCeEEEEecCcccccccCCHHHHHHHHHHHHhCC
Confidence 1356999999999999999998875 579999999999998 589999999999999999
Q ss_pred CEEEeCCeEEEEeCC-eE-EEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHh-CcCCCcceEeCCCCccCCCCCEE
Q 007975 293 IDVKLGSMVVKVTDK-EI-FTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALATDEWLRVEGSDSIY 369 (583)
Q Consensus 293 V~v~~~~~V~~v~~~-~v-~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~-~~~~~g~i~Vd~~l~~~~~~~Vy 369 (583)
|+++++++|++++.+ .+ .+.. +|++ +++|.||+|+|.+++. .+++.. .++.+|+|.||+++|| +.|+||
T Consensus 206 v~i~~~~~v~~i~~~~~v~~v~~--~~~~--i~~d~vi~a~G~~p~~---~~~~~~~~~~~~G~i~Vd~~~~t-~~~~Iy 277 (447)
T 1nhp_A 206 ITIATGETVERYEGDGRVQKVVT--DKNA--YDADLVVVAVGVRPNT---AWLKGTLELHPNGLIKTDEYMRT-SEPDVF 277 (447)
T ss_dssp EEEEESCCEEEEECSSBCCEEEE--SSCE--EECSEEEECSCEEESC---GGGTTTSCBCTTSCBCCCTTCBC-SSTTEE
T ss_pred CEEEcCCEEEEEEccCcEEEEEE--CCCE--EECCEEEECcCCCCCh---HHHHhhhhhcCCCcEEECccccC-CCCCEE
Confidence 999999999999864 33 2222 2543 9999999999965543 233333 3356889999999998 899999
Q ss_pred EcCcccccc
Q 007975 370 ALGDCATVN 378 (583)
Q Consensus 370 AiGD~a~~~ 378 (583)
|+|||+..+
T Consensus 278 a~GD~~~~~ 286 (447)
T 1nhp_A 278 AVGDATLIK 286 (447)
T ss_dssp ECGGGSCEE
T ss_pred EeeeEEEee
Confidence 999999753
No 25
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=8.4e-36 Score=322.16 Aligned_cols=267 Identities=23% Similarity=0.339 Sum_probs=199.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccc---------------------cCCCcccc---
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCG---------------------TVEARSIV--- 113 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g---------------------~~~~~~i~--- 113 (583)
.++|+|||||+||+++|..|++.|++|+|||+++.+++++....+.+. ..+...+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 479999999999999999999999999999988877665332111100 01111111
Q ss_pred ---------hhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc
Q 007975 114 ---------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE 184 (583)
Q Consensus 114 ---------~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~ 184 (583)
..+..++++.+ ++++.+++..+|.....|...++. ..++.||+||+|||+.|..+++||.+
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~--v~~~~g~v~~id~~~~~V~~~~g~--------~~~~~~d~lviAtG~~p~~p~i~G~~ 153 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYET--LTFYKGYVKIKDPTHVIVKTDEGK--------EIEAETRYMIIASGAETAKLRLPGVE 153 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTT--EEEESEEEEEEETTEEEEEETTSC--------EEEEEEEEEEECCCEEECCCCCTTGG
T ss_pred HhheeccccchHHHHHHhCC--CEEEEeEEEEecCCeEEEEcCCCc--------EEEEecCEEEECCCCCccCCCCCCcc
Confidence 22333444455 778889999999775555544322 12399999999999999999999986
Q ss_pred ccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEE
Q 007975 185 ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKIT 264 (583)
Q Consensus 185 ~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vt 264 (583)
.+.+.+++..+++. +. ..+++++|||||++|+|+|..+.++ +.+|+
T Consensus 154 ----~~~t~~~~~~~~~~---------l~-------~~~~~vvViGgG~~g~e~A~~l~~~--------------g~~Vt 199 (466)
T 3l8k_A 154 ----YCLTSDDIFGYKTS---------FR-------KLPQDMVIIGAGYIGLEIASIFRLM--------------GVQTH 199 (466)
T ss_dssp ----GSBCHHHHHSTTCS---------CC-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TCEEE
T ss_pred ----ceEeHHHHHHHHHH---------Hh-------hCCCeEEEECCCHHHHHHHHHHHHc--------------CCEEE
Confidence 24455554322111 11 2346999999999999999999876 57999
Q ss_pred EEecCCcccCcc-cHHHHHHHHHHHHhCCCEEEeCCeEEEEeC---CeEEEEEcC-CCeeEEeecceEEEccCCCCchhH
Q 007975 265 LLEAADHILNMF-DKRITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIFTKVRG-NGETSSMPYGMVVWSTGIAPHAII 339 (583)
Q Consensus 265 lv~~~~~il~~~-~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~~v~~~~~~-~G~~~~i~~D~vI~a~G~~~~p~~ 339 (583)
++++.+++++.+ ++++.+.+.+.|+ |+++++++|++++. +.+.+.... +|+..++++|.||||+|.+++ +
T Consensus 200 lv~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~--~ 274 (466)
T 3l8k_A 200 IIEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPV--I 274 (466)
T ss_dssp EECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEEC--C
T ss_pred EEEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcc--c
Confidence 999999999998 9999999988887 99999999999975 566555422 466446999999999996554 3
Q ss_pred HHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 340 KDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 340 ~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
. + ++.+++ +.+| |.||+++|| +.|+|||+|||+.
T Consensus 275 ~-l~l~~~gl~~~~~G-i~vd~~~~t-~~~~Iya~GD~~~ 311 (466)
T 3l8k_A 275 P-EGAREIGLSISKTG-IVVDETMKT-NIPNVFATGDANG 311 (466)
T ss_dssp C-TTTGGGTCCBCSSS-BCCCTTCBC-SSTTEEECGGGTC
T ss_pred c-cchhhcCceeCCCC-EeECCCccC-CCCCEEEEEecCC
Confidence 2 4 566666 6688 999999999 8999999999975
No 26
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=100.00 E-value=2.3e-35 Score=320.58 Aligned_cols=276 Identities=16% Similarity=0.291 Sum_probs=204.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCC--CCCeEEEEcCCCCCCCC-C-chhhhccccC---------------------CCc
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNN--PSYDVQVISPRNYFAFT-P-LLPSVTCGTV---------------------EAR 110 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~--~g~~Vtlie~~~~~~~~-p-~l~~~~~g~~---------------------~~~ 110 (583)
+..++|||||||+||++||..|++ .+.+|+|||++++++|. | +...+..+.. .+.
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPP 88 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCG
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccch
Confidence 346799999999999999998874 48999999999877663 2 2222211110 000
Q ss_pred ccchhHHHHH--HhCCCcEEEEEe-EEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCc----
Q 007975 111 SIVEPVRNIV--RKKNVDICFWEA-ECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGV---- 183 (583)
Q Consensus 111 ~i~~~~~~~~--~~~~i~v~~~~~-~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~---- 183 (583)
......+.+. .+.+ ++++.+ +|+.||++.++|.+.++. ++.||+||||||++|+.++++|.
T Consensus 89 ~~~~~~~~l~~~~~~g--v~~~~g~~v~~id~~~~~V~~~~g~----------~i~yd~lviATGs~p~~~~~~~~~~~~ 156 (493)
T 1m6i_A 89 SFYVSAQDLPHIENGG--VAVLTGKKVVQLDVRDNMVKLNDGS----------QITYEKCLIATGGTPRSLSAIDRAGAE 156 (493)
T ss_dssp GGSBCTTTTTTSTTCE--EEEEETCCEEEEEGGGTEEEETTSC----------EEEEEEEEECCCEEECCCHHHHTSCHH
T ss_pred HhhcchhhhhhhhcCC--eEEEcCCEEEEEECCCCEEEECCCC----------EEECCEEEECCCCCCCCCCCccccccc
Confidence 0000001111 1233 666664 899999999999886543 79999999999999987766552
Q ss_pred -cccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCce
Q 007975 184 -EENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVK 262 (583)
Q Consensus 184 -~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~ 262 (583)
.++.+.+++.+++..++..+. .+++++|||||++|+|+|..+.+..++ .+.+
T Consensus 157 ~~~~v~~~~~~~d~~~l~~~~~-----------------~~~~vvViGgG~iG~E~A~~l~~~~~~----------~g~~ 209 (493)
T 1m6i_A 157 VKSRTTLFRKIGDFRSLEKISR-----------------EVKSITIIGGGFLGSELACALGRKARA----------LGTE 209 (493)
T ss_dssp HHHTEEECCSHHHHHHHHHHHH-----------------HCSEEEEECCSHHHHHHHHHHHHHHHH----------HTCE
T ss_pred ccCceEEEcCHHHHHHHHHHhh-----------------cCCeEEEECCCHHHHHHHHHHHhhhhh----------cCCE
Confidence 235566788888888766532 356999999999999999999876431 1579
Q ss_pred EEEEecCCcccCc-ccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCchhH
Q 007975 263 ITLLEAADHILNM-FDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAII 339 (583)
Q Consensus 263 Vtlv~~~~~il~~-~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~ 339 (583)
|+++++.+.+++. +++.+.+.+.+.++++||+++++++|++++. +.+.+.. .+|++ +++|.||||+|+.++.
T Consensus 210 V~~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l-~dG~~--i~aD~Vv~a~G~~pn~-- 284 (493)
T 1m6i_A 210 VIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKL-KDGRK--VETDHIVAAVGLEPNV-- 284 (493)
T ss_dssp EEEECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECCCEEECC--
T ss_pred EEEEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEE-CCCCE--EECCEEEECCCCCccH--
Confidence 9999998876653 6788999999999999999999999999963 4454443 45764 9999999999966554
Q ss_pred HHHHHHhCc--CC-CcceEeCCCCccCCCCCEEEcCcccccc
Q 007975 340 KDFMKQVGQ--TN-RRALATDEWLRVEGSDSIYALGDCATVN 378 (583)
Q Consensus 340 ~~l~~~~~~--~~-~g~i~Vd~~l~~~~~~~VyAiGD~a~~~ 378 (583)
.+++.+++ +. +|+|.||+++|+ .|+|||+|||+..+
T Consensus 285 -~l~~~~gl~~~~~~ggi~Vd~~l~t--~~~IyA~GD~a~~~ 323 (493)
T 1m6i_A 285 -ELAKTGGLEIDSDFGGFRVNAELQA--RSNIWVAGDAACFY 323 (493)
T ss_dssp -TTHHHHTCCBCTTTCSEECCTTCEE--ETTEEECGGGEEEE
T ss_pred -HHHHHcCCccccCCCcEEECCCccc--CCCeeEeeeeEecc
Confidence 35666776 33 588999999997 59999999999864
No 27
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=3.8e-35 Score=302.84 Aligned_cols=267 Identities=17% Similarity=0.174 Sum_probs=196.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCch--hhh----ccc--cCCCcccchhHHHHHHhCCCcEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL--PSV----TCG--TVEARSIVEPVRNIVRKKNVDIC 128 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l--~~~----~~g--~~~~~~i~~~~~~~~~~~~i~v~ 128 (583)
++++|+|||||++|+++|..|++.|++|+|||+++.+++.+.. +.. ..+ .....++...+.+.+.+.++++.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 83 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYS 83 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEE
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEE
Confidence 4579999999999999999999899999999998876543210 000 000 11123455566677777776553
Q ss_pred EEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCC---CCCCCCCCCccccC-----cccCCHHHHHHHH
Q 007975 129 FWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA---RANTFNTPGVEENC-----NFLKEVEDAQRIR 200 (583)
Q Consensus 129 ~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~---~~~~~~ipG~~~~~-----~~~~~~~~a~~l~ 200 (583)
.+.+|+.++.+.+.+.+....+ ..+.||+||+|+|+ .|..+++||.+... +.+++.
T Consensus 84 -~~~~v~~i~~~~~~~~v~~~~g--------~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~------- 147 (335)
T 2zbw_A 84 -LGERAETLEREGDLFKVTTSQG--------NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSK------- 147 (335)
T ss_dssp -ESCCEEEEEEETTEEEEEETTS--------CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCG-------
T ss_pred -eCCEEEEEEECCCEEEEEECCC--------CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCch-------
Confidence 4778999988765544443221 17999999999999 57777888865321 011111
Q ss_pred HHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHH
Q 007975 201 RNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRI 280 (583)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~ 280 (583)
....+++|+|||+|++|+|+|..|.+. +.+|+++++.+.+++. +..
T Consensus 148 ------------------~~~~~~~v~viG~G~~g~e~a~~l~~~--------------g~~V~~v~~~~~~~~~--~~~ 193 (335)
T 2zbw_A 148 ------------------AEFQGKRVLIVGGGDSAVDWALNLLDT--------------ARRITLIHRRPQFRAH--EAS 193 (335)
T ss_dssp ------------------GGGTTCEEEEECSSHHHHHHHHHTTTT--------------SSEEEEECSSSSCCSC--HHH
T ss_pred ------------------hhcCCCEEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEcCCccCcc--HHH
Confidence 112456999999999999999998764 5799999999987664 567
Q ss_pred HHHHHHHHHhCCCEEEeCCeEEEEeCC----eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc-CCCcceE
Q 007975 281 TAFAEEKFSRDGIDVKLGSMVVKVTDK----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALA 355 (583)
Q Consensus 281 ~~~~~~~L~~~GV~v~~~~~V~~v~~~----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~-~~~g~i~ 355 (583)
.+.+.+.+++.||++++++.|++++++ .+++....+|+..++++|.||||+|..++. .+++.+++ ..+|+|.
T Consensus 194 ~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~~~~~~~g~i~ 270 (335)
T 2zbw_A 194 VKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKL---GPLANWGLALEKNKIK 270 (335)
T ss_dssp HHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEEC---GGGGGSCCCEETTEEE
T ss_pred HHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCc---hHhhhcceeccCCeee
Confidence 788888899999999999999999764 466654335754469999999999966543 35556666 2478999
Q ss_pred eCCCCccCCCCCEEEcCccccc
Q 007975 356 TDEWLRVEGSDSIYALGDCATV 377 (583)
Q Consensus 356 Vd~~l~~~~~~~VyAiGD~a~~ 377 (583)
||+++|+ +.|+|||+|||+..
T Consensus 271 vd~~~~t-~~~~vya~GD~~~~ 291 (335)
T 2zbw_A 271 VDTTMAT-SIPGVYACGDIVTY 291 (335)
T ss_dssp CCTTCBC-SSTTEEECSTTEEC
T ss_pred eCCCCCC-CCCCEEEecccccc
Confidence 9999998 89999999999874
No 28
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=1.4e-35 Score=320.58 Aligned_cols=270 Identities=17% Similarity=0.273 Sum_probs=196.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCch----hh----------------hc-ccc-------CCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PS----------------VT-CGT-------VEA 109 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l----~~----------------~~-~g~-------~~~ 109 (583)
+++|+|||||+||+++|..|++.|++|+|||+++.+++++.. |. .. .|. .+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 479999999999999999999999999999999776554221 10 00 010 011
Q ss_pred cc-----------cchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 110 RS-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 110 ~~-----------i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
.. +...+..++++.+ ++++.+++..++.....|.+.++ +...+.||+||+|||+.|..+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~--v~~~~g~~~~i~~~~~~v~~~~G--------~~~~~~~d~lviAtG~~p~~p 151 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNK--VTYYKGEGSFETAHSIRVNGLDG--------KQEMLETKKTIIATGSEPTEL 151 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEEEEETTEEEEEETTS--------CEEEEEEEEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEeeCCEEEEEecCC--------ceEEEEcCEEEECCCCCcCCC
Confidence 11 1112345566666 55667777778765434433222 123799999999999999988
Q ss_pred CCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCC
Q 007975 179 NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (583)
Q Consensus 179 ~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~ 258 (583)
+++|.+.. .+.+.+++..+. ..+++++|||||++|+|+|..+.++
T Consensus 152 ~~~g~~~~--~v~t~~~~~~~~--------------------~~~~~vvViGgG~~g~E~A~~l~~~------------- 196 (468)
T 2qae_A 152 PFLPFDEK--VVLSSTGALALP--------------------RVPKTMVVIGGGVIGLELGSVWARL------------- 196 (468)
T ss_dssp TTBCCCSS--SEECHHHHHTCS--------------------SCCSEEEEECCSHHHHHHHHHHHHT-------------
T ss_pred CCCCCCcC--ceechHHHhhcc--------------------cCCceEEEECCCHHHHHHHHHHHHh-------------
Confidence 88887532 233444443210 1346999999999999999999876
Q ss_pred CCceEEEEecCCcccCcccHHHHHHHHHHH-HhCCCEEEeCCeEEEEeCC--eEEEEEc-CCCeeEEeecceEEEccCCC
Q 007975 259 DSVKITLLEAADHILNMFDKRITAFAEEKF-SRDGIDVKLGSMVVKVTDK--EIFTKVR-GNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 259 ~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L-~~~GV~v~~~~~V~~v~~~--~v~~~~~-~~G~~~~i~~D~vI~a~G~~ 334 (583)
+.+|+++++.+++++.+++++.+.+.+.| +++||+++++++|++++.+ .+.+... .+|+..++++|.||||+|.+
T Consensus 197 -g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 197 -GAEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp -TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEE
T ss_pred -CCEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 57999999999999999999999999999 9999999999999999753 3444321 14643459999999999965
Q ss_pred CchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 335 PHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 335 ~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
++. ..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 276 p~~--~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 317 (468)
T 2qae_A 276 PFT--GGLGLDKINVAKNERGFVKIGDHFET-SIPDVYAIGDVVD 317 (468)
T ss_dssp ECC--TTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGBS
T ss_pred cCC--CCCCchhcCCccCCCCCEeECCCccc-CCCCEEEeeccCC
Confidence 543 222 566676 56799999999998 8999999999985
No 29
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=4.1e-35 Score=300.14 Aligned_cols=264 Identities=19% Similarity=0.276 Sum_probs=192.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCch----hhhcc-ccCCCcccchhHHHHHHhCCCcEEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSVTC-GTVEARSIVEPVRNIVRKKNVDICFWE 131 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l----~~~~~-g~~~~~~i~~~~~~~~~~~~i~v~~~~ 131 (583)
++++|+|||||++|+++|..|++.|++|+|||++ .+..... +.+.. ......++...+.+.+.+.++++. .
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~ 89 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVL--L 89 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEE--E
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEE--E
Confidence 3579999999999999999999999999999998 2222111 11110 112234566677788888886654 4
Q ss_pred eEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcccc---CcccCCHHHHHHHHHHHHHHHH
Q 007975 132 AECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEEN---CNFLKEVEDAQRIRRNVIESFE 208 (583)
Q Consensus 132 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~---~~~~~~~~~a~~l~~~l~~~~~ 208 (583)
++|+.++.+++.+.+....+ .++.||+||+|+|+.|..+++||..+. ........+
T Consensus 90 ~~v~~i~~~~~~~~v~~~~g--------~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~------------- 148 (323)
T 3f8d_A 90 DIVEKIENRGDEFVVKTKRK--------GEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVAD------------- 148 (323)
T ss_dssp SCEEEEEEC--CEEEEESSS--------CEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHH-------------
T ss_pred EEEEEEEecCCEEEEEECCC--------CEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCC-------------
Confidence 99999998866544443221 189999999999999999999997642 111111100
Q ss_pred HcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHH
Q 007975 209 KASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKF 288 (583)
Q Consensus 209 ~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L 288 (583)
.....+++++|||+|++|+|+|..+.+. +.+|+++++.+++++ ++. ...+.+
T Consensus 149 ---------~~~~~~~~v~vvG~G~~~~e~a~~l~~~--------------g~~v~~~~~~~~~~~--~~~---~~~~~~ 200 (323)
T 3f8d_A 149 ---------APLFKNRVVAVIGGGDSALEGAEILSSY--------------STKVYLIHRRDTFKA--QPI---YVETVK 200 (323)
T ss_dssp ---------GGGGTTCEEEEECCSHHHHHHHHHHHHH--------------SSEEEEECSSSSCCS--CHH---HHHHHH
T ss_pred ---------HhHcCCCEEEEECCCHHHHHHHHHHHHh--------------CCeEEEEEeCCCCCc--CHH---HHHHHH
Confidence 0113456999999999999999999876 479999999998876 232 233334
Q ss_pred HhCCCEEEeCCeEEEEeCC----eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc--CCCcceEeCCCCcc
Q 007975 289 SRDGIDVKLGSMVVKVTDK----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRV 362 (583)
Q Consensus 289 ~~~GV~v~~~~~V~~v~~~----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~ 362 (583)
++.||+++++++|++++.+ .+++.+..+|+..++++|.||||+|..++ . .+++.+++ +.+|+|.||+++++
T Consensus 201 ~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~--~-~~~~~~g~~~~~~g~i~vd~~~~t 277 (323)
T 3f8d_A 201 KKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPP--T-DFAKSNGIETDTNGYIKVDEWMRT 277 (323)
T ss_dssp TCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECC--H-HHHHHTTCCBCTTSSBCCCTTCBC
T ss_pred hCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCC--h-hHHhhcCeeecCCCcEecCCCcee
Confidence 4559999999999999765 36666545577556999999999996555 3 45666766 67899999999998
Q ss_pred CCCCCEEEcCccccc
Q 007975 363 EGSDSIYALGDCATV 377 (583)
Q Consensus 363 ~~~~~VyAiGD~a~~ 377 (583)
+.|+|||+|||+..
T Consensus 278 -~~~~vya~GD~~~~ 291 (323)
T 3f8d_A 278 -SVPGVFAAGDCTSA 291 (323)
T ss_dssp -SSTTEEECSTTBST
T ss_pred -cCCCEEEcceecCC
Confidence 89999999999864
No 30
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=1.3e-35 Score=321.57 Aligned_cols=269 Identities=18% Similarity=0.274 Sum_probs=196.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhh---------------------h-cccc------CC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPS---------------------V-TCGT------VE 108 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~---------------------~-~~g~------~~ 108 (583)
.+++|||||||+||+++|..|++.|++|+|||+++.++++..... . ..|. .+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 357999999999999999999988999999999976654321110 0 0010 01
Q ss_pred Cccc-----------chhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 109 ARSI-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 109 ~~~i-----------~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
...+ ...+...+++.+ ++++.+++..+|.....|.+.++ +..++.||+||+|||+.|..
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~~~~~v~~~~g--------g~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNK--VVHVNGYGKITGKNQVTATKADG--------GTQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEEEETTEEEEECTTS--------CEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEecCCEEEEEecCC--------CcEEEEeCEEEECCCCCCCC
Confidence 1111 112345566676 55677888778754333333221 12379999999999999999
Q ss_pred CCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCC
Q 007975 178 FNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKV 257 (583)
Q Consensus 178 ~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~ 257 (583)
+++||.+.. .+.+.+++.. +. ..+++++|||||++|+|+|..+.++
T Consensus 155 p~i~g~~~~--~v~t~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~------------ 200 (474)
T 1zmd_A 155 FPGITIDED--TIVSSTGALS-------------LK-------KVPEKMVVIGAGVIGVELGSVWQRL------------ 200 (474)
T ss_dssp CTTCCCCSS--SEECHHHHTT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT------------
T ss_pred CCCCCCCcC--cEEcHHHHhh-------------cc-------ccCceEEEECCCHHHHHHHHHHHHc------------
Confidence 999997542 1234333321 11 1246999999999999999999876
Q ss_pred CCCceEEEEecCCcccC-cccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCC--e-EEEEE----cCCCeeEEeecceEEE
Q 007975 258 KDSVKITLLEAADHILN-MFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKV----RGNGETSSMPYGMVVW 329 (583)
Q Consensus 258 ~~~~~Vtlv~~~~~il~-~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~-v~~~~----~~~G~~~~i~~D~vI~ 329 (583)
+.+|+++++.+++++ .+++++.+.+.+.|++.||+++++++|++++.+ + +.+.. ..+++ ++++|.|||
T Consensus 201 --g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~--~i~~D~vv~ 276 (474)
T 1zmd_A 201 --GADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAE--VITCDVLLV 276 (474)
T ss_dssp --TCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCE--EEEESEEEE
T ss_pred --CCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCce--EEEcCEEEE
Confidence 579999999999999 899999999999999999999999999999743 3 55542 12344 499999999
Q ss_pred ccCCCCchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 330 STGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 330 a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
|+|.+++ +..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 277 a~G~~p~--~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 323 (474)
T 1zmd_A 277 CIGRRPF--TKNLGLEELGIELDPRGRIPVNTRFQT-KIPNIYAIGDVVA 323 (474)
T ss_dssp CSCEEEC--CTTSSHHHHTCCCCTTSCCCCCTTCBC-SSTTEEECGGGSS
T ss_pred CcCCCcC--CCcCCchhcCCccCCCCCEEECcCCcc-CCCCEEEeeecCC
Confidence 9996554 3222 566676 56799999999998 8999999999975
No 31
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=5e-35 Score=320.42 Aligned_cols=267 Identities=19% Similarity=0.304 Sum_probs=199.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc----hhhh--------------------ccccCC---
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV--------------------TCGTVE--- 108 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~----l~~~--------------------~~g~~~--- 108 (583)
..+++|||||||++|+++|..|++.|++|+|||+++.+++... .|.. ......
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 3468999999999999999999988999999999986554321 1110 001111
Q ss_pred -CcccchhH----H---HHH-----HhCCCcEEEE-EeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCC
Q 007975 109 -ARSIVEPV----R---NIV-----RKKNVDICFW-EAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGAR 174 (583)
Q Consensus 109 -~~~i~~~~----~---~~~-----~~~~i~v~~~-~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~ 174 (583)
.+++...+ . .++ .+.+++ ++ ++++..++. +.|.+. + ..+.||+||+|||+.
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~--~~~~~~v~~i~~--~~v~~~-g----------~~~~~d~lViATGs~ 185 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNLE--YILNCPAKVIDN--HTVEAA-G----------KVFKAKNLILAVGAG 185 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCCC--EEESSCCEEEET--TEEEET-T----------EEEEBSCEEECCCEE
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCcE--EEEeeEEEEeeC--CEEEEC-C----------EEEEeCEEEECCCCC
Confidence 11222222 2 455 666654 45 888888885 567664 2 179999999999999
Q ss_pred CCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhc
Q 007975 175 ANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLY 254 (583)
Q Consensus 175 ~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~ 254 (583)
|..+++||.+... +.+.+++. +. +.. ..+++++|||||++|+|+|..+.++
T Consensus 186 p~~p~i~G~~~~~--v~~~~~~~---~~---------l~~------~~g~~vvViGgG~~g~E~A~~l~~~--------- 236 (523)
T 1mo9_A 186 PGTLDVPGVNAKG--VFDHATLV---EE---------LDY------EPGSTVVVVGGSKTAVEYGCFFNAT--------- 236 (523)
T ss_dssp CCCCCSTTTTSBT--EEEHHHHH---HH---------CCS------CCCSEEEEECCSHHHHHHHHHHHHT---------
T ss_pred CCCCCCCCcccCc--EeeHHHHH---HH---------HHh------cCCCeEEEECCCHHHHHHHHHHHHc---------
Confidence 9999999975421 22333322 00 110 1126999999999999999999876
Q ss_pred CCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--Ce----EEEEEcCCCeeEEeecceEE
Q 007975 255 PKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE----IFTKVRGNGETSSMPYGMVV 328 (583)
Q Consensus 255 p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~----v~~~~~~~G~~~~i~~D~vI 328 (583)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. ++ +.+.. .+|+ .++++|.||
T Consensus 237 -----G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~-~~G~-~~i~aD~Vv 309 (523)
T 1mo9_A 237 -----GRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMT-PNGE-MRIETDFVF 309 (523)
T ss_dssp -----TCEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEE-TTEE-EEEECSCEE
T ss_pred -----CCeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEE-CCCc-EEEEcCEEE
Confidence 57999999999999999999999999999999999999999999974 44 44443 4565 249999999
Q ss_pred EccCCCCchhHHHHHHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 329 WSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 329 ~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+|+|.+++... +++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 310 ~A~G~~p~~~~--~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~ 356 (523)
T 1mo9_A 310 LGLGEQPRSAE--LAKILGLDLGPKGEVLVNEYLQT-SVPNVYAVGDLIG 356 (523)
T ss_dssp ECCCCEECCHH--HHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGC
T ss_pred ECcCCccCCcc--CHHHcCCccCCCCCEEECCCCcc-CCCCEEEEeecCC
Confidence 99997655421 5667776 56899999999998 8999999999985
No 32
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.1e-35 Score=316.59 Aligned_cols=274 Identities=23% Similarity=0.341 Sum_probs=195.2
Q ss_pred CCCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhc---------------------ccc------
Q 007975 54 MGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT---------------------CGT------ 106 (583)
Q Consensus 54 ~~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~---------------------~g~------ 106 (583)
+.+++++|+|||||+||++||..|++.|++|+|||+++.+++++....+. .|.
T Consensus 21 ~~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~ 100 (491)
T 3urh_A 21 QSMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPK 100 (491)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCE
T ss_pred hhcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCc
Confidence 34556899999999999999999999999999999988776642211000 000
Q ss_pred CCCc-----------ccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCC
Q 007975 107 VEAR-----------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARA 175 (583)
Q Consensus 107 ~~~~-----------~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~ 175 (583)
.+.. .+...+...++..+ ++++.+++..++.. .+.+.... ++...+.||+||||||+.|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~~~~~--~~~v~~~~------g~~~~~~~d~lViATGs~p 170 (491)
T 3urh_A 101 LNLQKMMAHKDATVKSNVDGVSFLFKKNK--IDGFQGTGKVLGQG--KVSVTNEK------GEEQVLEAKNVVIATGSDV 170 (491)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEECSSS--EEEEECTT------SCEEEEECSEEEECCCEEC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEecCC--EEEEEeCC------CceEEEEeCEEEEccCCCC
Confidence 0000 01112334456666 66788888887755 44443221 1134899999999999986
Q ss_pred CCCCCCCccc--cCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhh
Q 007975 176 NTFNTPGVEE--NCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKL 253 (583)
Q Consensus 176 ~~~~ipG~~~--~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~ 253 (583)
+.+||..+ ....+.+.+++.. +. ..+++++|||||++|+|+|..+.++
T Consensus 171 --~~ipg~~~~~~~~~~~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~-------- 220 (491)
T 3urh_A 171 --AGIPGVEVAFDEKTIVSSTGALA-------------LE-------KVPASMIVVGGGVIGLELGSVWARL-------- 220 (491)
T ss_dssp --CCBTTBCCCCCSSSEECHHHHTS-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHH--------
T ss_pred --CCCCCcccccCCeeEEehhHhhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHHc--------
Confidence 46787752 1222333332211 11 2356999999999999999999886
Q ss_pred cCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeE--EEEEcCCCeeEEeecceEEE
Q 007975 254 YPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEI--FTKVRGNGETSSMPYGMVVW 329 (583)
Q Consensus 254 ~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v--~~~~~~~G~~~~i~~D~vI~ 329 (583)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. +.+ ++.+..+|+..++++|.||+
T Consensus 221 ------g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~ 294 (491)
T 3urh_A 221 ------GAKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLI 294 (491)
T ss_dssp ------TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEE
T ss_pred ------CCEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEE
Confidence 57999999999999999999999999999999999999999999964 343 34432335434699999999
Q ss_pred ccCCCCchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 330 STGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 330 a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
|+|..++ +..+ ++..++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 295 a~G~~p~--~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 341 (491)
T 3urh_A 295 ATGRKPS--TDGLGLAKAGVVLDSRGRVEIDRHFQT-SIAGVYAIGDVVR 341 (491)
T ss_dssp CCCCEEC--CTTSCHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSS
T ss_pred eeCCccC--CCccCchhcCceECCCCCEeECCCCCC-CCCCEEEEEecCC
Confidence 9996544 4333 566666 67899999999998 8999999999974
No 33
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=2.9e-35 Score=317.87 Aligned_cols=268 Identities=22% Similarity=0.367 Sum_probs=193.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCch----hh----------------hc-ccc-----CCCcc
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PS----------------VT-CGT-----VEARS 111 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l----~~----------------~~-~g~-----~~~~~ 111 (583)
+++|+|||||+||+++|..|++.|++|+|||++ .++...+. |. .. .+. .+...
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 479999999999999999999999999999998 33322110 10 00 000 00001
Q ss_pred -----------cchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCC
Q 007975 112 -----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (583)
Q Consensus 112 -----------i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~i 180 (583)
+...+.+.+++.+ ++++.+++..++. +.+.+.... + +..++.||+||+|||+.|..+++
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~g--v~~~~g~~~~id~--~~v~V~~~~-----G-~~~~~~~d~lViAtG~~~~~~~~ 151 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNK--ITEIHGYGTFADA--NTLLVDLND-----G-GTESVTFDNAIIATGSSTRLVPG 151 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--CEEECEEEEESSS--SEEEEEETT-----S-CCEEEEEEEEEECCCEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecC--CeEEEEeCC-----C-ceEEEEcCEEEECCCCCCCCCCC
Confidence 1112345566666 4455666655543 445444321 1 11379999999999999998888
Q ss_pred CCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCC
Q 007975 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (583)
Q Consensus 181 pG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~ 260 (583)
+|.+.. +.+.+++..+ . ..+++++|||||++|+|+|..+.++ +
T Consensus 152 ~g~~~~---~~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~E~A~~l~~~--------------g 194 (464)
T 2a8x_A 152 TSLSAN---VVTYEEQILS-------------R-------ELPKSIIIAGAGAIGMEFGYVLKNY--------------G 194 (464)
T ss_dssp CCCBTT---EECHHHHHTC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CCCCce---EEecHHHhhc-------------c-------ccCCeEEEECCcHHHHHHHHHHHHc--------------C
Confidence 887543 3344443221 1 1346999999999999999999876 5
Q ss_pred ceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCC--eEEEEEcCCCeeEEeecceEEEccCCCCchh
Q 007975 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (583)
Q Consensus 261 ~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~ 338 (583)
.+|+++++.+++++.+++++.+.+.+.|+++||+++++++|++++++ .+.+....+|+..++++|.||||+|.+++
T Consensus 195 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~-- 272 (464)
T 2a8x_A 195 VDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN-- 272 (464)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEEC--
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCcc--
Confidence 79999999999999999999999999999999999999999999753 35544322464345999999999996554
Q ss_pred HHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 339 IKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 339 ~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 273 ~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 312 (464)
T 2a8x_A 273 VEGYGLDKAGVALTDRKAIGVDDYMRT-NVGHIYAIGDVNG 312 (464)
T ss_dssp CSSSCHHHHTCCBCTTSSBCCCTTSBC-SSTTEEECGGGGC
T ss_pred CCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEeECcCC
Confidence 3222 566676 56799999999998 8999999999975
No 34
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.8e-35 Score=316.71 Aligned_cols=271 Identities=17% Similarity=0.299 Sum_probs=195.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhc---------------------ccc------CCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT---------------------CGT------VEA 109 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~---------------------~g~------~~~ 109 (583)
.+++|+|||||+||+++|..|++.|++|+|||+++.+++........ .|. .+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 46899999999999999999998899999999997776543211000 010 011
Q ss_pred cc-----------cchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 110 RS-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 110 ~~-----------i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
.. +...+...+++.+ ++++.+++..++.. .+.+.... ++...+.||+||+|||+.|..+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~~--~~~v~~~~------G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNK--VTYVKGYGKFVSPS--EISVDTIE------GENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEESCEEEEETT--EEEECCSS------SCCEEEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecCC--EEEEEeCC------CceEEEEcCEEEECCCCCCCCC
Confidence 11 1111334555666 45666766667654 44443221 1113799999999999999988
Q ss_pred CCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCC
Q 007975 179 NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (583)
Q Consensus 179 ~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~ 258 (583)
+++|.+.. .+.+..++.. +. ..+++++|||||++|+|+|..+.++
T Consensus 155 ~~~g~~~~--~v~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~e~A~~l~~~------------- 199 (470)
T 1dxl_A 155 PGVTIDEK--KIVSSTGALA-------------LS-------EIPKKLVVIGAGYIGLEMGSVWGRI------------- 199 (470)
T ss_dssp TTBCCCSS--SEECHHHHTT-------------CS-------SCCSEEEESCCSHHHHHHHHHHHHH-------------
T ss_pred CCCCCCcc--cEEeHHHhhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHHc-------------
Confidence 88887542 1234333221 11 1346999999999999999999876
Q ss_pred CCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCC--eEEEE--EcCCCeeEEeecceEEEccCCC
Q 007975 259 DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTK--VRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 259 ~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~v~~~--~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ .+.+. +..+|+..++++|.||||+|.+
T Consensus 200 -g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 200 -GSEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp -TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred -CCcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 579999999999999999999999999999999999999999999854 34433 2113533359999999999965
Q ss_pred CchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 335 PHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 335 ~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
++ +..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 279 p~--~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 320 (470)
T 1dxl_A 279 PF--TSGLNLDKIGVETDKLGRILVNERFST-NVSGVYAIGDVIP 320 (470)
T ss_dssp EC--CTTSCCTTTTCCBCSSSCBCCCTTCBC-SSTTEEECSTTSS
T ss_pred cC--CCCCCchhcCCccCCCCCEeECcCCcc-CCCCEEEEeccCC
Confidence 54 3222 455666 56789999999998 8999999999975
No 35
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=4.6e-35 Score=315.53 Aligned_cols=267 Identities=21% Similarity=0.388 Sum_probs=193.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc----hhhh---------------c-ccc------CCCcc
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV---------------T-CGT------VEARS 111 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~----l~~~---------------~-~g~------~~~~~ 111 (583)
+++|+|||||+||+++|..|++.|++|+|||++ .+++++. .|.. . .|. .+...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 478999999999999999999999999999998 3332211 1100 0 010 00011
Q ss_pred -----------cchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCC
Q 007975 112 -----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (583)
Q Consensus 112 -----------i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~i 180 (583)
+...+.+.+++.+ ++++.+++..++.. .+.+.... +..++.||+||+|||+.|..+++
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~id~~--~v~V~~~~-------G~~~i~~d~lViATGs~p~~~~~ 150 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNK--VEIVKGEAYFVDAN--TVRVVNGD-------SAQTYTFKNAIIATGSRPIELPN 150 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTT--CEEEESEEEEEETT--EEEEEETT-------EEEEEECSEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEccCC--eEEEEeCC-------CcEEEEeCEEEEecCCCCCCCCC
Confidence 1122345566666 55677777777754 44443221 11379999999999999998888
Q ss_pred CCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCC
Q 007975 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (583)
Q Consensus 181 pG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~ 260 (583)
+|.++. +.+..++..+ . ..+++++|||||++|+|+|..+.++ +
T Consensus 151 ~g~~~~---v~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~e~A~~l~~~--------------g 193 (455)
T 1ebd_A 151 FKFSNR---ILDSTGALNL-------------G-------EVPKSLVVIGGGYIGIELGTAYANF--------------G 193 (455)
T ss_dssp BCCCSS---EECHHHHHTC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CCccce---EecHHHHhcc-------------c-------cCCCeEEEECCCHHHHHHHHHHHHc--------------C
Confidence 887543 3344443221 1 1346999999999999999999875 5
Q ss_pred ceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCchh
Q 007975 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (583)
Q Consensus 261 ~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~ 338 (583)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|+++++ +.+.+....+|+..++++|.||||+|.+++
T Consensus 194 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~-- 271 (455)
T 1ebd_A 194 TKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN-- 271 (455)
T ss_dssp CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES--
T ss_pred CcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc--
Confidence 7999999999999999999999999999999999999999999974 345444211233345999999999996554
Q ss_pred HHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 339 IKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 339 ~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 272 ~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 311 (455)
T 1ebd_A 272 TDELGLEQIGIKMTNRGLIEVDQQCRT-SVPNIFAIGDIVP 311 (455)
T ss_dssp CSSSSTTTTTCCBCTTSCBCCCTTCBC-SSTTEEECGGGSS
T ss_pred cCcCChhhcCCccCCCCCEeeCCCccc-CCCCEEEEeccCC
Confidence 3222 455565 56799999999998 8999999999975
No 36
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=3.6e-34 Score=309.52 Aligned_cols=265 Identities=19% Similarity=0.272 Sum_probs=193.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCch----------------------hh---hcc--ccCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----------------------PS---VTC--GTVEA 109 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l----------------------~~---~~~--g~~~~ 109 (583)
.+++|||||||++|+++|..|++.|++|+|||+++ ++++... +. +.. ...+.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 35899999999999999999999999999999983 3322110 00 000 00011
Q ss_pred cccc-------hh-----HHHHHHhC-CCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCC
Q 007975 110 RSIV-------EP-----VRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARAN 176 (583)
Q Consensus 110 ~~i~-------~~-----~~~~~~~~-~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~ 176 (583)
..+. .. +.+++++. + ++++.+++..++.....|.+.++ +...+.||+||+|||++|.
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~--v~~~~g~~~~~~~~~~~v~~~~g--------~~~~~~~d~lviAtGs~p~ 151 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPA--ITVVHGEARFKDDQSLTVRLNEG--------GERVVMFDRCLVATGASPA 151 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTT--EEEEEEEEEEEETTEEEEEETTS--------SEEEEECSEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCC--eEEEEEEEEEccCCEEEEEeCCC--------ceEEEEeCEEEEeCCCCCC
Confidence 1111 11 22444544 5 67788889999876444444332 1237999999999999999
Q ss_pred CCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCC
Q 007975 177 TFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPK 256 (583)
Q Consensus 177 ~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~ 256 (583)
.|++||.+.. .+.+.+++..+ . ..+++++|||+|++|+|+|..+.++
T Consensus 152 ~p~i~G~~~~--~~~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~E~A~~l~~~----------- 198 (467)
T 1zk7_A 152 VPPIPGLKES--PYWTSTEALAS-------------D-------TIPERLAVIGSSVVALELAQAFARL----------- 198 (467)
T ss_dssp CCCCTTTTTS--CCBCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT-----------
T ss_pred CCCCCCCCcC--ceecHHHHhcc-------------c-------ccCCEEEEECCCHHHHHHHHHHHHc-----------
Confidence 9999998543 22344443221 0 1346999999999999999999876
Q ss_pred CCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 257 VKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 257 ~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
+.+|+++++.+++++ +++.+.+.+.+.|++.||+++++++|++++. +.+.+.. . +. ++++|.||||+|.+
T Consensus 199 ---g~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~-~-~~--~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 199 ---GSKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTT-T-HG--ELRADKLLVATGRT 270 (467)
T ss_dssp ---TCEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEE-T-TE--EEEESEEEECSCEE
T ss_pred ---CCEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEE-C-Cc--EEEcCEEEECCCCC
Confidence 579999999999999 9999999999999999999999999999964 3334433 2 44 39999999999965
Q ss_pred CchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 335 PHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 335 ~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
++ +..+ ++.+++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 271 p~--~~~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~iya~GD~~~ 312 (467)
T 1zk7_A 271 PN--TRSLALDAAGVTVNAQGAIVIDQGMRT-SNPNIYAAGDCTD 312 (467)
T ss_dssp ES--CTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSTTBS
T ss_pred cC--CCcCCchhcCCcCCCCCCEEECCCccc-CCCCEEEEeccCC
Confidence 44 3222 455666 56789999999998 8999999999985
No 37
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=3e-34 Score=295.04 Aligned_cols=263 Identities=14% Similarity=0.158 Sum_probs=187.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchh----hhc--cccCCCcccchhHHHHHHhCCCcEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLP----SVT--CGTVEARSIVEPVRNIVRKKNVDICFW 130 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~----~~~--~g~~~~~~i~~~~~~~~~~~~i~v~~~ 130 (583)
.+++|+|||||++|+++|..|++.|++|+|||++. .+...... .+. .......++...+.+.+.+.+++ ++
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~--~~ 83 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAK--VE 83 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCE--EE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCE--EE
Confidence 45799999999999999999999999999999983 32221110 000 00122335566677778888854 55
Q ss_pred EeEEEEEecC--CC---EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHHHH
Q 007975 131 EAECFKIDAE--NK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVI 204 (583)
Q Consensus 131 ~~~v~~id~~--~~---~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~ 204 (583)
.++|+.++.+ ++ .|.+.++. .+.||+||+|+|+.|..+++||.++.. ..+...... +
T Consensus 84 ~~~v~~i~~~~~~~~~~~v~~~~g~----------~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~----~--- 146 (325)
T 2q7v_A 84 MDEVQGVQHDATSHPYPFTVRGYNG----------EYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATC----D--- 146 (325)
T ss_dssp ECCEEEEEECTTSSSCCEEEEESSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHH----H---
T ss_pred eeeEEEEEeccCCCceEEEEECCCC----------EEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccC----C---
Confidence 6899999886 43 55555432 799999999999999989999975421 111111100 0
Q ss_pred HHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHH
Q 007975 205 ESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFA 284 (583)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~ 284 (583)
.....+++++|||+|++|+|+|..|.+. +.+|+++++.+.+.. ++.+
T Consensus 147 -------------~~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~--~~~~---- 193 (325)
T 2q7v_A 147 -------------GFFYKGKKVVVIGGGDAAVEEGMFLTKF--------------ADEVTVIHRRDTLRA--NKVA---- 193 (325)
T ss_dssp -------------GGGGTTCEEEEECCSHHHHHHHHHHTTT--------------CSEEEEECSSSSCCS--CHHH----
T ss_pred -------------HHHcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEeCCCcCCc--chHH----
Confidence 0012456999999999999999998765 579999999987643 3332
Q ss_pred HHHHH-hCCCEEEeCCeEEEEeCC----eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHh-CcCCCcceEeCC
Q 007975 285 EEKFS-RDGIDVKLGSMVVKVTDK----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALATDE 358 (583)
Q Consensus 285 ~~~L~-~~GV~v~~~~~V~~v~~~----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~-~~~~~g~i~Vd~ 358 (583)
.+.+. +.||+++++++|++++++ ++++.+..+|+..++++|.||||+|.+++. .+++.+ .++.+|+|.||+
T Consensus 194 ~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~~~~~~~g~i~vd~ 270 (325)
T 2q7v_A 194 QARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNT---AFVKDTVSLRDDGYVDVRD 270 (325)
T ss_dssp HHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESC---GGGTTTSCBCTTSCBCCBT
T ss_pred HHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCCh---HHHhhhcccCCCccEecCC
Confidence 33444 469999999999999764 466654345765569999999999976553 233333 336789999999
Q ss_pred CCccCCCCCEEEcCcccc
Q 007975 359 WLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 359 ~l~~~~~~~VyAiGD~a~ 376 (583)
++++ +.|+|||+|||+.
T Consensus 271 ~~~t-~~~~vya~GD~~~ 287 (325)
T 2q7v_A 271 EIYT-NIPMLFAAGDVSD 287 (325)
T ss_dssp TTBC-SSTTEEECSTTTC
T ss_pred CCcc-CCCCEEEeecccC
Confidence 9998 8999999999985
No 38
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=2.2e-34 Score=314.94 Aligned_cols=270 Identities=19% Similarity=0.241 Sum_probs=192.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC--------CCCCCCchhhhc--------------------cc--
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN--------YFAFTPLLPSVT--------------------CG-- 105 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~--------~~~~~p~l~~~~--------------------~g-- 105 (583)
+..++|+|||||+||++||..|++.|++|+|||+++ .++++++...+. .|
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 346899999999999999999999999999999864 333322111000 01
Q ss_pred -----cCCCcccch-----------hHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEE
Q 007975 106 -----TVEARSIVE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVI 169 (583)
Q Consensus 106 -----~~~~~~i~~-----------~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVi 169 (583)
..+...+.. .+...++..+ ++++.+++..+++....|...++ +.+++.||+|||
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~g--V~~i~g~a~~~d~~~v~v~~~~g--------~~~~i~~d~lVi 179 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKK--VVYENAYGQFIGPHRIKATNNKG--------KEKIYSAERFLI 179 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSEEEEEETTEEEEECTTC--------CCCEEEEEEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEeeCCEEEEEcCCC--------CEEEEECCEEEE
Confidence 011111111 1223455566 66889999999876544443222 123799999999
Q ss_pred ccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHh
Q 007975 170 AMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDED 249 (583)
Q Consensus 170 AtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~ 249 (583)
|||+.|..|++||..++.. +.+++.. +. ...++++|||||++|+|+|..+.++
T Consensus 180 ATGs~p~~p~i~G~~~~~~---t~~~~~~-------------l~-------~~~~~vvVIGgG~ig~E~A~~l~~~---- 232 (519)
T 3qfa_A 180 ATGERPRYLGIPGDKEYCI---SSDDLFS-------------LP-------YCPGKTLVVGASYVALECAGFLAGI---- 232 (519)
T ss_dssp CCCEEECCCCCTTHHHHCB---CHHHHTT-------------CS-------SCCCSEEEECCSHHHHHHHHHHHHT----
T ss_pred ECCCCcCCCCCCCccCceE---cHHHHhh-------------hh-------hcCCeEEEECCcHHHHHHHHHHHHc----
Confidence 9999999999999754322 2222211 11 2235899999999999999999886
Q ss_pred HhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC------CeEEE--EEcCCCeeEE
Q 007975 250 LFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD------KEIFT--KVRGNGETSS 321 (583)
Q Consensus 250 ~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~------~~v~~--~~~~~G~~~~ 321 (583)
+.+|+++++ +.+++.+++++.+.+.+.|++.||++++++.+++++. +.+.+ ...++++..+
T Consensus 233 ----------G~~Vtlv~~-~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~ 301 (519)
T 3qfa_A 233 ----------GLDVTVMVR-SILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIE 301 (519)
T ss_dssp ----------TCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEE
T ss_pred ----------CCeEEEEec-ccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEE
Confidence 579999998 4789999999999999999999999999988777743 33433 3322233345
Q ss_pred eecceEEEccCCCCchhHHHH-HHHhCc--C-CCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 322 MPYGMVVWSTGIAPHAIIKDF-MKQVGQ--T-NRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 322 i~~D~vI~a~G~~~~p~~~~l-~~~~~~--~-~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+++|.||||+|.+++ +..+ ++.+++ + .+|+|.||+++|| +.|+|||+|||+.
T Consensus 302 ~~~D~vi~a~G~~p~--~~~l~l~~~gl~~~~~~G~I~Vd~~~~T-s~~~IyA~GD~~~ 357 (519)
T 3qfa_A 302 GEYNTVMLAIGRDAC--TRKIGLETVGVKINEKTGKIPVTDEEQT-NVPYIYAIGDILE 357 (519)
T ss_dssp EEESEEEECSCEEES--CSSSCSTTTTCCCCTTTCCBCCCTTSBC-SSTTEEECGGGBS
T ss_pred EECCEEEEecCCccc--CCCCChhhcCcEEcCCCCeEeeCCCCcc-CCCCEEEEEeccC
Confidence 899999999996544 4223 455666 4 4789999999998 8999999999984
No 39
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1e-34 Score=293.83 Aligned_cols=258 Identities=14% Similarity=0.185 Sum_probs=188.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC-chhhhcc-ccCCCcccchhHHHHHHhCCCcEEEEEeEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-LLPSVTC-GTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p-~l~~~~~-g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~ 135 (583)
+++|+|||||++|+++|..|++.|++|+|||+++.....+ ..+.+.. ......++...+.+.+.+.+ .+++++++|+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~ 80 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERYP-TIHWVEGRVT 80 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTCT-TEEEEESCEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhcC-CeEEEEeEEE
Confidence 4799999999999999999999999999999876433222 1111111 22334466677777777763 3778889999
Q ss_pred EEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHHHHHHHHHcCCCC
Q 007975 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFEKASLPN 214 (583)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~~~~~~~~~~~ 214 (583)
.++.+++.+.+....+ .++.||+||+|||+.|+.+.+||..+.. ....... . .+
T Consensus 81 ~i~~~~~~~~v~~~~g--------~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~----~----~~--------- 135 (297)
T 3fbs_A 81 DAKGSFGEFIVEIDGG--------RRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCP----Y----CH--------- 135 (297)
T ss_dssp EEEEETTEEEEEETTS--------CEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCH----H----HH---------
T ss_pred EEEEcCCeEEEEECCC--------CEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcc----c----Cc---------
Confidence 9998876444433221 1799999999999999989999976421 0010100 0 00
Q ss_pred CCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCE
Q 007975 215 LSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGID 294 (583)
Q Consensus 215 ~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~ 294 (583)
....++++++|||+|++|+|+|..|.+. + +|+++++.+.. ++ +.+.+.|++.||+
T Consensus 136 ---~~~~~~~~v~vvG~G~~~~e~a~~l~~~--------------g-~v~~v~~~~~~---~~----~~~~~~l~~~gv~ 190 (297)
T 3fbs_A 136 ---GYELDQGKIGVIAASPMAIHHALMLPDW--------------G-ETTFFTNGIVE---PD----ADQHALLAARGVR 190 (297)
T ss_dssp ---TGGGTTCEEEEECCSTTHHHHHHHGGGT--------------S-EEEEECTTTCC---CC----HHHHHHHHHTTCE
T ss_pred ---chhhcCCEEEEEecCccHHHHHHHhhhc--------------C-cEEEEECCCCC---CC----HHHHHHHHHCCcE
Confidence 0112457999999999999999998764 4 89999988752 22 3456788999999
Q ss_pred EEeCCeEEEEeCC-eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc--C--CCc-ceEeCCCCccCCCCCE
Q 007975 295 VKLGSMVVKVTDK-EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--T--NRR-ALATDEWLRVEGSDSI 368 (583)
Q Consensus 295 v~~~~~V~~v~~~-~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~--~~g-~i~Vd~~l~~~~~~~V 368 (583)
++. ++|++++++ .+++ .+|++ +++|.||||+|..++. .+++.+++ + .+| ++.||+++++ +.|+|
T Consensus 191 i~~-~~v~~i~~~~~v~~---~~g~~--~~~D~vi~a~G~~p~~---~~~~~~g~~~~~~~~G~~i~vd~~~~t-~~~~v 260 (297)
T 3fbs_A 191 VET-TRIREIAGHADVVL---ADGRS--IALAGLFTQPKLRITV---DWIEKLGCAVEEGPMGSTIVTDPMKQT-TARGI 260 (297)
T ss_dssp EEC-SCEEEEETTEEEEE---TTSCE--EEESEEEECCEEECCC---SCHHHHTCCEEEETTEEEECCCTTCBC-SSTTE
T ss_pred EEc-ceeeeeecCCeEEe---CCCCE--EEEEEEEEccCcccCc---hhHHhcCCccccCCCCceEEeCCCCcc-CCCCE
Confidence 996 899999987 4444 34765 9999999999976553 35666766 2 457 8999999998 89999
Q ss_pred EEcCcccc
Q 007975 369 YALGDCAT 376 (583)
Q Consensus 369 yAiGD~a~ 376 (583)
||+|||+.
T Consensus 261 ya~GD~~~ 268 (297)
T 3fbs_A 261 FACGDVAR 268 (297)
T ss_dssp EECSGGGC
T ss_pred EEEeecCC
Confidence 99999975
No 40
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=1.7e-34 Score=310.47 Aligned_cols=259 Identities=20% Similarity=0.319 Sum_probs=194.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc----hhhh-----------c----c--c------cCCCc
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV-----------T----C--G------TVEAR 110 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~----l~~~-----------~----~--g------~~~~~ 110 (583)
+++|+|||||+||+++|..|++.|++|+|||+++ ++++.. .|.. . . + ..+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~ 82 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWE 82 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 5799999999999999999999999999999984 333211 0100 0 0 0 00001
Q ss_pred c-----------cchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCC
Q 007975 111 S-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (583)
Q Consensus 111 ~-----------i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ 179 (583)
. +...++..+.+.+ ++++.++++.++. +.|.+ ++ ..+.||+||||||+.|..|+
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~i~~--~~v~~-~g----------~~~~~d~lviAtGs~p~~p~ 147 (450)
T 1ges_A 83 TLIASRTAYIDRIHTSYENVLGKNN--VDVIKGFARFVDA--KTLEV-NG----------ETITADHILIATGGRPSHPD 147 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCCEEEET--TEEEE-TT----------EEEEEEEEEECCCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecC--CEEEE-CC----------EEEEeCEEEECCCCCCCCCC
Confidence 1 1112334455666 5677888888875 46766 22 17999999999999999999
Q ss_pred CCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCC
Q 007975 180 TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKD 259 (583)
Q Consensus 180 ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~ 259 (583)
+||.+ +. .+.+++..+ . ...++++|||||++|+|+|..+.++
T Consensus 148 i~g~~-~~---~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~e~A~~l~~~-------------- 189 (450)
T 1ges_A 148 IPGVE-YG---IDSDGFFAL-------------P-------ALPERVAVVGAGYIGVELGGVINGL-------------- 189 (450)
T ss_dssp STTGG-GS---BCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------
T ss_pred CCCcc-ce---ecHHHhhhh-------------h-------hcCCeEEEECCCHHHHHHHHHHHhc--------------
Confidence 99873 32 233333221 0 1345999999999999999999876
Q ss_pred CceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCC--e-EEEEEcCCCeeEEeecceEEEccCCCCc
Q 007975 260 SVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (583)
Q Consensus 260 ~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~-v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 336 (583)
+.+|+++++.+++++.+++.+.+.+.+.|++.||+++++++|++++.+ + +.+.. .+|++ +++|.||||+|.+
T Consensus 190 g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~-~~g~~--i~~D~vv~a~G~~-- 264 (450)
T 1ges_A 190 GAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLEL-EDGRS--ETVDCLIWAIGRE-- 264 (450)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEE-TTSCE--EEESEEEECSCEE--
T ss_pred CCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEE-CCCcE--EEcCEEEECCCCC--
Confidence 579999999999999999999999999999999999999999999743 3 44443 45764 9999999999954
Q ss_pred hhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 337 p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
|++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 265 p~~~~l~~~~~gl~~~~~g~i~vd~~~~t-~~~~IyA~GD~~~ 306 (450)
T 1ges_A 265 PANDNINLEAAGVKTNEKGYIVVDKYQNT-NIEGIYAVGDNTG 306 (450)
T ss_dssp ESCTTSCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECSGGGT
T ss_pred cCCCCCCchhcCceECCCCCEeECCCCcc-CCCCEEEEeccCC
Confidence 444334 566676 56899999999997 8999999999974
No 41
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=7.3e-35 Score=300.44 Aligned_cols=274 Identities=15% Similarity=0.197 Sum_probs=192.0
Q ss_pred CCCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC----CCCCCCchhh----h--ccccCCCcccchhHHHHHHhC
Q 007975 54 MGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN----YFAFTPLLPS----V--TCGTVEARSIVEPVRNIVRKK 123 (583)
Q Consensus 54 ~~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~----~~~~~p~l~~----~--~~g~~~~~~i~~~~~~~~~~~ 123 (583)
...++++|+|||||++|+++|..|++.|++|+|||+++ ..++...... + ........++...+...+.+.
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKF 97 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHT
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHc
Confidence 33456899999999999999999999999999999965 2222111000 0 011112335667778888888
Q ss_pred CCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHH
Q 007975 124 NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRN 202 (583)
Q Consensus 124 ~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~ 202 (583)
+++ ++.++|+.++.+.+.+.+..... .....+.||+||+|+|+.|..+++||.++.. ..+.... .....
T Consensus 98 gv~--i~~~~v~~i~~~~~~~~v~~~~~-----~~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~~~---~~~~~ 167 (338)
T 3itj_A 98 GTE--IITETVSKVDLSSKPFKLWTEFN-----EDAEPVTTDAIILATGASAKRMHLPGEETYWQKGISACA---VCDGA 167 (338)
T ss_dssp TCE--EECSCEEEEECSSSSEEEEETTC-----SSSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCH---HHHTT
T ss_pred CCE--EEEeEEEEEEEcCCEEEEEEEec-----CCCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEEch---hcccc
Confidence 854 55666999999888777644210 0012789999999999999999999975321 1111111 00000
Q ss_pred HHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHH
Q 007975 203 VIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITA 282 (583)
Q Consensus 203 l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~ 282 (583)
.....+++++|||+|++|+|+|..|.+. +.+|+++++.+.+++ .+
T Consensus 168 ---------------~~~~~~~~v~vvG~G~~g~e~a~~l~~~--------------g~~v~~v~~~~~~~~------~~ 212 (338)
T 3itj_A 168 ---------------VPIFRNKPLAVIGGGDSACEEAQFLTKY--------------GSKVFMLVRKDHLRA------ST 212 (338)
T ss_dssp ---------------SGGGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCS------CH
T ss_pred ---------------hhhcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEEcCCccCC------CH
Confidence 0013467999999999999999999775 579999999998766 23
Q ss_pred HHHHHHHhC-CCEEEeCCeEEEEeCCe-----EEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHH-hCcCCCcceE
Q 007975 283 FAEEKFSRD-GIDVKLGSMVVKVTDKE-----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQTNRRALA 355 (583)
Q Consensus 283 ~~~~~L~~~-GV~v~~~~~V~~v~~~~-----v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~-~~~~~~g~i~ 355 (583)
.+.+.+.+. ||+++++++|++++.+. +++.+..+|+..++++|.||||+|+.++. .++.. +.++.+|+|.
T Consensus 213 ~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~~~~~l~~~~~G~i~ 289 (338)
T 3itj_A 213 IMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPAT---KIVAGQVDTDEAGYIK 289 (338)
T ss_dssp HHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECC---GGGBTTBCBCTTSCBC
T ss_pred HHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCCh---hHhhCceEecCCCcEE
Confidence 445666665 99999999999997543 66666455655579999999999976654 23332 2336789998
Q ss_pred e-CCCCccCCCCCEEEcCcccc
Q 007975 356 T-DEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 356 V-d~~l~~~~~~~VyAiGD~a~ 376 (583)
| |+++++ +.|+|||+|||+.
T Consensus 290 v~~~~~~t-~~~~vya~GD~~~ 310 (338)
T 3itj_A 290 TVPGSSLT-SVPGFFAAGDVQD 310 (338)
T ss_dssp CCTTSSBC-SSTTEEECGGGGC
T ss_pred EcCccccc-CCCCEEEeeccCC
Confidence 5 778887 8999999999986
No 42
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=1.7e-34 Score=294.71 Aligned_cols=262 Identities=16% Similarity=0.124 Sum_probs=188.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEE-EcCCCCCCCCCchhhh---ccc---cCCCcccchhHHHHHHhCCCcEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQV-ISPRNYFAFTPLLPSV---TCG---TVEARSIVEPVRNIVRKKNVDICF 129 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtl-ie~~~~~~~~p~l~~~---~~g---~~~~~~i~~~~~~~~~~~~i~v~~ 129 (583)
.+++|+|||||+||+++|..|++.|++|+| ||+. .+++....... .++ .....++...+...+.+.+++ +
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~ 79 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLK--H 79 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCE--E
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcE--E
Confidence 468999999999999999999999999999 9994 33332111110 011 223346677778888888744 5
Q ss_pred EEeEEEEEecCC--CEEE--EecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHHHH
Q 007975 130 WEAECFKIDAEN--KKVY--CRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVI 204 (583)
Q Consensus 130 ~~~~v~~id~~~--~~v~--~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~ 204 (583)
..++|+.+ .+. +.+. +... . ++.||+||+|||+.|+.+.+||..... ..+......
T Consensus 80 ~~~~v~~i-~~~~~~~~~v~~~~~---------~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~~-------- 140 (315)
T 3r9u_A 80 EMVGVEQI-LKNSDGSFTIKLEGG---------K-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCATC-------- 140 (315)
T ss_dssp ECCCEEEE-EECTTSCEEEEETTS---------C-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH--------
T ss_pred EEEEEEEE-ecCCCCcEEEEEecC---------C-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeecc--------
Confidence 66789998 555 4555 4332 1 789999999999999999999976421 111111110
Q ss_pred HHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHH
Q 007975 205 ESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFA 284 (583)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~ 284 (583)
......+++++|||+|++|+|+|..+.+. +.+|+++++.+++.. ++. ..
T Consensus 141 ------------~~~~~~~~~v~viG~g~~~~e~a~~l~~~--------------g~~v~~~~~~~~~~~--~~~---~~ 189 (315)
T 3r9u_A 141 ------------DGFFYKNKEVAVLGGGDTALEEALYLANI--------------CSKIYLIHRRDEFRA--APS---TV 189 (315)
T ss_dssp ------------HGGGGTTSEEEEECCBHHHHHHHHHHHTT--------------SSEEEEECSSSSCBS--CHH---HH
T ss_pred ------------cccccCcCEEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEeCCCCCC--CHH---HH
Confidence 00112456999999999999999999875 579999999988732 333 33
Q ss_pred HHHHHhCCCEEEeCCeEEEEeCCe-----EEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHH---hC-c--CCCcc
Q 007975 285 EEKFSRDGIDVKLGSMVVKVTDKE-----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ---VG-Q--TNRRA 353 (583)
Q Consensus 285 ~~~L~~~GV~v~~~~~V~~v~~~~-----v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~---~~-~--~~~g~ 353 (583)
.+.+++.||+++++++|++++.+. +++. ..+|+..++++|.||||+|..++. .++.. ++ + +.+|+
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~p~~---~~~~~~~~~g~l~~~~~g~ 265 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGDKMGVAGVKVK-LKDGSIRDLNVPGIFTFVGLNVRN---EILKQDDSKFLCNMEEGGQ 265 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEETTEEEEEEEE-CTTSCEEEECCSCEEECSCEEECC---GGGBCTTSCBSSCBCTTSC
T ss_pred HHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEE-cCCCCeEEeecCeEEEEEcCCCCc---hhhhcccccceeeecCCCc
Confidence 455678899999999999997543 5555 346765569999999999976554 23333 33 4 67799
Q ss_pred eEeCCCCccCCCCCEEEcCcccc
Q 007975 354 LATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 354 i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
|.||+++|+ +.|+|||+|||+.
T Consensus 266 i~vd~~~~t-~~~~v~a~GD~~~ 287 (315)
T 3r9u_A 266 VSVDLKMQT-SVAGLFAAGDLRK 287 (315)
T ss_dssp BCCCTTCBC-SSTTEEECGGGBT
T ss_pred EEeCCCccc-CCCCEEEeecccC
Confidence 999999999 8999999999985
No 43
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=2.1e-34 Score=312.37 Aligned_cols=270 Identities=18% Similarity=0.286 Sum_probs=189.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhh--------------------hc-ccc-------CCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPS--------------------VT-CGT-------VEA 109 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~--------------------~~-~g~-------~~~ 109 (583)
+++|+|||||++|+++|..|++.|++|+|||+++.++++++... .. .|. .+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 47999999999999999999999999999999776654321110 00 010 000
Q ss_pred ccc-----------chhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEE------eecCEEEEccC
Q 007975 110 RSI-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFC------MDYDYLVIAMG 172 (583)
Q Consensus 110 ~~i-----------~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~------i~yD~LViAtG 172 (583)
..+ ...+...+++.+ ++++.++...++ .+.+.+....+ . ... +.||+||+|||
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~--~~~v~V~~~~G-----~-~~~~~~~~~i~~d~lViAtG 154 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNK--VTYYKGNGSFED--ETKIRVTPVDG-----L-EGTVKEDHILDVKNIIVATG 154 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEESS--SSEEEEECCTT-----C-TTCCSSCEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEcc--CCeEEEEecCC-----C-cccccccceEEeCEEEECcC
Confidence 011 111334566666 445666655543 34555442211 0 014 99999999999
Q ss_pred CCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhh
Q 007975 173 ARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFK 252 (583)
Q Consensus 173 ~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~ 252 (583)
+.|. .+||.......+.+.+++..++ ..+++++|||||++|+|+|..+.++
T Consensus 155 s~p~--~~~g~~~~~~~v~~~~~~~~~~--------------------~~~~~vvViGgG~~g~e~A~~l~~~------- 205 (478)
T 1v59_A 155 SEVT--PFPGIEIDEEKIVSSTGALSLK--------------------EIPKRLTIIGGGIIGLEMGSVYSRL------- 205 (478)
T ss_dssp EEEC--CCTTCCCCSSSEECHHHHTTCS--------------------SCCSEEEEECCSHHHHHHHHHHHHT-------
T ss_pred CCCC--CCCCCCCCCceEEcHHHHHhhh--------------------ccCceEEEECCCHHHHHHHHHHHHc-------
Confidence 9873 4666542222344554443211 1246999999999999999999875
Q ss_pred hcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC---C-eEE--EEEcCCCeeEEeecce
Q 007975 253 LYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD---K-EIF--TKVRGNGETSSMPYGM 326 (583)
Q Consensus 253 ~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~-~v~--~~~~~~G~~~~i~~D~ 326 (583)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. + .+. +.+..+|+..++++|.
T Consensus 206 -------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~ 278 (478)
T 1v59_A 206 -------GSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEV 278 (478)
T ss_dssp -------TCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESE
T ss_pred -------CCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCE
Confidence 57999999999999999999999999999999999999999999974 2 233 3321234334599999
Q ss_pred EEEccCCCCchhHHH-HHHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 327 VVWSTGIAPHAIIKD-FMKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 327 vI~a~G~~~~p~~~~-l~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
||||+|.+++ +.. +++.+++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 279 vv~a~G~~p~--~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 328 (478)
T 1v59_A 279 LLVAVGRRPY--IAGLGAEKIGLEVDKRGRLVIDDQFNS-KFPHIKVVGDVTF 328 (478)
T ss_dssp EEECSCEEEC--CTTSCTTTTTCCBCTTSCBCCCTTSBC-SSTTEEECGGGSS
T ss_pred EEECCCCCcC--CCCCCchhcCceeCCCCCEeECcCCcc-CCCCEEEeeccCC
Confidence 9999996554 322 3556666 56899999999998 8999999999985
No 44
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2.4e-34 Score=313.39 Aligned_cols=271 Identities=18% Similarity=0.331 Sum_probs=185.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc----hhhh-----------c-----ccc-----CCCc--
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV-----------T-----CGT-----VEAR-- 110 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~----l~~~-----------~-----~g~-----~~~~-- 110 (583)
+++|||||||+||+++|..|++.|++|+|||+++ +++++. .|.. . .|. .+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 80 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLL 80 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHH
Confidence 4799999999999999999998999999999985 332211 1110 0 010 0111
Q ss_pred ---------ccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCC---CCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 111 ---------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQN---TNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 111 ---------~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~---~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
.+...+...+++.+ ++++.+++..+|. +.+.+.+... ....+.+..++.||+||||||+.|..|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~id~--~~v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~p~~p 156 (500)
T 1onf_A 81 VERRDKYIQRLNNIYRQNLSKDK--VDLYEGTASFLSE--NRILIKGTKDNNNKDNGPLNEEILEGRNILIAVGNKPVFP 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--CEEEESCCCCC----------------------------CBSSEEECCCCCBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEeeC--CEEEEEeccccccccccCCCceEEEeCEEEECCCCCCCCC
Confidence 11122344556666 5567777766664 4555533000 000000012789999999999999999
Q ss_pred CCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCC
Q 007975 179 NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (583)
Q Consensus 179 ~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~ 258 (583)
++||.+ +.+ +.+++.. +. . +++++|||||++|+|+|..++++
T Consensus 157 ~i~G~~-~~~---~~~~~~~-------------~~-------~-~~~vvViGgG~ig~E~A~~l~~~------------- 198 (500)
T 1onf_A 157 PVKGIE-NTI---SSDEFFN-------------IK-------E-SKKIGIVGSGYIAVELINVIKRL------------- 198 (500)
T ss_dssp SCTTGG-GCE---EHHHHTT-------------CC-------C-CSEEEEECCSHHHHHHHHHHHTT-------------
T ss_pred CCCCCC-ccc---CHHHHhc-------------cC-------C-CCeEEEECChHHHHHHHHHHHHc-------------
Confidence 999973 322 2222211 11 1 46999999999999999999875
Q ss_pred CCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCC--e-EEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 259 DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 259 ~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~-v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
+.+|+++++.+++++.+++++.+.+.+.|+++||+++++++|++++++ + +.+.. .+|++ ++++|.||||+|.++
T Consensus 199 -g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~-~~g~~-~~~~D~vi~a~G~~p 275 (500)
T 1onf_A 199 -GIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHL-SDGRI-YEHFDHVIYCVGRSP 275 (500)
T ss_dssp -TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEE-TTSCE-EEEESEEEECCCBCC
T ss_pred -CCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEE-CCCcE-EEECCEEEECCCCCc
Confidence 579999999999999999999999999999999999999999999742 2 45443 45653 489999999999655
Q ss_pred chhHHHH-HHHhCc-CCCcceEeCCCCccCCCCCEEEcCccccc
Q 007975 336 HAIIKDF-MKQVGQ-TNRRALATDEWLRVEGSDSIYALGDCATV 377 (583)
Q Consensus 336 ~p~~~~l-~~~~~~-~~~g~i~Vd~~l~~~~~~~VyAiGD~a~~ 377 (583)
+ +..| ++.+++ ..+|+|.||+++|| +.|+|||+|||+..
T Consensus 276 ~--~~~l~~~~~g~~~~~G~i~vd~~~~t-~~~~iya~GD~~~~ 316 (500)
T 1onf_A 276 D--TENLKLEKLNVETNNNYIVVDENQRT-SVNNIYAVGDCCMV 316 (500)
T ss_dssp T--TTTSSCTTTTCCBSSSCEEECTTCBC-SSSSEEECSTTEEE
T ss_pred C--CCCCCchhcCccccCCEEEECCCccc-CCCCEEEEeccccc
Confidence 4 3234 455665 36789999999997 89999999999965
No 45
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=2e-34 Score=313.35 Aligned_cols=272 Identities=22% Similarity=0.311 Sum_probs=195.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCC-CCCeEEEEc--------CCCCCCCCCchhhhc--------------------cc---
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN-PSYDVQVIS--------PRNYFAFTPLLPSVT--------------------CG--- 105 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~-~g~~Vtlie--------~~~~~~~~p~l~~~~--------------------~g--- 105 (583)
+++|+|||||+||+++|..|++ .|++|+||| +++.++++.....+. .|
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5799999999999999999998 999999999 244444332111000 00
Q ss_pred -----cCCCcccc-----------hhHHHHHHhC-CCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEE
Q 007975 106 -----TVEARSIV-----------EPVRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLV 168 (583)
Q Consensus 106 -----~~~~~~i~-----------~~~~~~~~~~-~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LV 168 (583)
..+...+. ..+...+++. + ++++.++++.++. +.|.+....+. +......+.||+||
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~g--v~~~~g~~~~i~~--~~v~v~~~~~~--~~~~~~~~~~d~lV 160 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEG--LDFFLGWGSLESK--NVVVVRETADP--KSAVKERLQADHIL 160 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTT--EEEEESEEEEEET--TEEEEESSSST--TSCEEEEEEEEEEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEEeEEEEeeC--CEEEEeecCCc--cCCCCeEEEcCEEE
Confidence 11111111 1223344555 6 6778888988874 57777621100 00001379999999
Q ss_pred EccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhH
Q 007975 169 IAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDE 248 (583)
Q Consensus 169 iAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~ 248 (583)
||||++|..|++||. ++.+ +.+++.. +. ...++++|||||++|+|+|..+.++.
T Consensus 161 iATGs~p~~p~i~G~-~~~~---~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~~-- 214 (495)
T 2wpf_A 161 LATGSWPQMPAIPGI-EHCI---SSNEAFY-------------LP-------EPPRRVLTVGGGFISVEFAGIFNAYK-- 214 (495)
T ss_dssp ECCCEEECCCCCTTG-GGCE---EHHHHTT-------------CS-------SCCSEEEEECSSHHHHHHHHHHHHHC--
T ss_pred EeCCCCcCCCCCCCc-cccc---cHHHHHh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHhhC--
Confidence 999999999999987 3322 2232211 11 13469999999999999999998761
Q ss_pred hHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCC--e-EEEEEcCCCeeEEeecc
Q 007975 249 DLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E-IFTKVRGNGETSSMPYG 325 (583)
Q Consensus 249 ~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~-v~~~~~~~G~~~~i~~D 325 (583)
| ++.+|+++++.+++++.+++++.+.+.+.|+++||+++++++|++++.+ + +.+.. .+|++ +++|
T Consensus 215 ------~---~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~-~~G~~--i~~D 282 (495)
T 2wpf_A 215 ------P---PGGKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTF-ESGKT--LDVD 282 (495)
T ss_dssp ------C---TTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEE-TTSCE--EEES
T ss_pred ------C---CCCeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEE-CCCcE--EEcC
Confidence 1 2579999999999999999999999999999999999999999999743 2 44443 45764 9999
Q ss_pred eEEEccCCCCchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 326 MVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 326 ~vI~a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
.||||+|.+ |++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 283 ~vv~a~G~~--p~~~~L~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~ 333 (495)
T 2wpf_A 283 VVMMAIGRI--PRTNDLQLGNVGVKLTPKGGVQVDEFSRT-NVPNIYAIGDITD 333 (495)
T ss_dssp EEEECSCEE--ECCGGGTGGGTTCCBCTTSSBCCCTTCBC-SSTTEEECGGGGC
T ss_pred EEEECCCCc--ccccccchhhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC
Confidence 999999965 444334 566676 56899999999998 8999999999974
No 46
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.5e-34 Score=290.92 Aligned_cols=265 Identities=16% Similarity=0.178 Sum_probs=180.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhcc---c--cCCCcccchhHHHHHHhCCCcEEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTC---G--TVEARSIVEPVRNIVRKKNVDICFWE 131 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~---g--~~~~~~i~~~~~~~~~~~~i~v~~~~ 131 (583)
..+|||||||||||++||.+|++.|++|+|||+.. ++++.+...... + .....++.........+....+ ...
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~-~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 82 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI-PGGQMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVY-QYG 82 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEE-EEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCeeecccccCCcCCccccchHHHHHHHHHHHhhccccc-cce
Confidence 46899999999999999999999999999999864 333222111111 1 1111233444445555555333 233
Q ss_pred eEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHHHHHHHHHc
Q 007975 132 AECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFEKA 210 (583)
Q Consensus 132 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~~~~~~~ 210 (583)
..+...+.....+...++. ++.||+||||||++|+.+++||.++.. ..+.... ..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~----------~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~~~~--------~~~----- 139 (312)
T 4gcm_A 83 DIKSVEDKGEYKVINFGNK----------ELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCA--------VCD----- 139 (312)
T ss_dssp CCCEEEECSSCEEEECSSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCH--------HHH-----
T ss_pred eeeeeeeeecceeeccCCe----------EEEeceeEEcccCccCcCCCCChhhhCCccEEeee--------ccC-----
Confidence 3444455554444443332 899999999999999999999976421 1111110 000
Q ss_pred CCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHh
Q 007975 211 SLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSR 290 (583)
Q Consensus 211 ~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~ 290 (583)
....++++++|||||++|+|+|..++++ +.+||++++.+++++.... ..+.+++
T Consensus 140 -------~~~~~~k~vvViGgG~ig~E~A~~l~~~--------------g~~Vtlv~~~~~~~~~~~~-----~~~~~~~ 193 (312)
T 4gcm_A 140 -------GAFFKNKRLFVIGGGDSAVEEGTFLTKF--------------ADKVTIVHRRDELRAQRIL-----QDRAFKN 193 (312)
T ss_dssp -------GGGGTTCEEEEECCSHHHHHHHHHHTTT--------------CSEEEEECSSSSCCSCHHH-----HHHHHHC
T ss_pred -------ccccCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEecccccCcchhH-----HHHHHHh
Confidence 0112457999999999999999999876 5799999999999875322 2356777
Q ss_pred CCCEEEeCCeEEEEeC--C---eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc-CCCcceEeCCCCccCC
Q 007975 291 DGIDVKLGSMVVKVTD--K---EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEWLRVEG 364 (583)
Q Consensus 291 ~GV~v~~~~~V~~v~~--~---~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~-~~~g~i~Vd~~l~~~~ 364 (583)
.++.......+..+.. . ........+++...+++|.|++++|..+ +. .+...+++ +++|+|.||+++|| +
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~--~~-~~~~~~g~~~~~G~I~vd~~~~T-s 269 (312)
T 4gcm_A 194 DKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKP--LT-APFKDLGITNDVGYIVTKDDMTT-S 269 (312)
T ss_dssp TTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEE--SC-GGGGGGTCBCTTSCBCCCTTSBC-S
T ss_pred cCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCc--Cc-hhHHhcceecCCCeEeeCCCCcc-C
Confidence 8888888777666542 1 2233333445555799999999999544 44 45566676 67899999999999 8
Q ss_pred CCCEEEcCcccc
Q 007975 365 SDSIYALGDCAT 376 (583)
Q Consensus 365 ~~~VyAiGD~a~ 376 (583)
.|+|||+|||+.
T Consensus 270 ~pgIyA~GDv~~ 281 (312)
T 4gcm_A 270 VPGIFAAGDVRD 281 (312)
T ss_dssp STTEEECSTTBS
T ss_pred CCCEEEEeecCC
Confidence 999999999985
No 47
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-34 Score=310.79 Aligned_cols=265 Identities=20% Similarity=0.312 Sum_probs=194.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc----hhh-----------hc-----cc-----------
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPS-----------VT-----CG----------- 105 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~----l~~-----------~~-----~g----------- 105 (583)
.+++|+|||||+||+++|..|++.|++|+|||+++ +++++. .|. .. .+
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 35799999999999999999999999999999974 333211 010 00 00
Q ss_pred -cCCCccc-----------chhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCC
Q 007975 106 -TVEARSI-----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA 173 (583)
Q Consensus 106 -~~~~~~i-----------~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~ 173 (583)
..+...+ ...+...+++.+ ++++.+++..++.....|.+.++. ..++.||+||+|||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~~~~~v~~~~g~--------~~~~~~d~lviAtGs 158 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEK--VDVVFGWARFNKDGNVEVQKRDNT--------TEVYSANHILVATGG 158 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTT--EEEEEEEEEECTTSCEEEEESSSC--------CEEEEEEEEEECCCE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEeeCCEEEEEeCCCc--------EEEEEeCEEEEcCCC
Confidence 0000011 112334455666 667888888887654444433221 237899999999999
Q ss_pred CCCCC-CCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhh
Q 007975 174 RANTF-NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFK 252 (583)
Q Consensus 174 ~~~~~-~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~ 252 (583)
.|..| ++||.+ .. .+.++...+ . ..+++++|||||++|+|+|..+.++
T Consensus 159 ~p~~p~~i~g~~-~~---~~~~~~~~l-------------~-------~~~~~vvViGgG~ig~E~A~~l~~~------- 207 (479)
T 2hqm_A 159 KAIFPENIPGFE-LG---TDSDGFFRL-------------E-------EQPKKVVVVGAGYIGIELAGVFHGL------- 207 (479)
T ss_dssp EECCCTTSTTGG-GS---BCHHHHHHC-------------S-------SCCSEEEEECSSHHHHHHHHHHHHT-------
T ss_pred CCCCCCCCCCcc-cc---cchHHHhcc-------------c-------ccCCeEEEECCCHHHHHHHHHHHHc-------
Confidence 99988 899873 22 233332221 0 2346999999999999999999876
Q ss_pred hcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCC--e--EEEEEcCCCeeEEeecceEE
Q 007975 253 LYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--E--IFTKVRGNGETSSMPYGMVV 328 (583)
Q Consensus 253 ~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~--v~~~~~~~G~~~~i~~D~vI 328 (583)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ + +.+.. .+|+ .++++|.||
T Consensus 208 -------g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~-~~G~-~~i~~D~vv 278 (479)
T 2hqm_A 208 -------GSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHM-NDSK-SIDDVDELI 278 (479)
T ss_dssp -------TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEE-TTSC-EEEEESEEE
T ss_pred -------CCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEE-CCCc-EEEEcCEEE
Confidence 579999999999999999999999999999999999999999999742 3 44443 4572 249999999
Q ss_pred EccCCCCchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 329 WSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
||+|.+++ + .| ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 279 ~a~G~~p~--~-~l~l~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 325 (479)
T 2hqm_A 279 WTIGRKSH--L-GMGSENVGIKLNSHDQIIADEYQNT-NVPNIYSLGDVVG 325 (479)
T ss_dssp ECSCEEEC--C-CSSGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTT
T ss_pred ECCCCCCc--c-ccChhhcCceECCCCCEeECCCCcc-CCCCEEEEEecCC
Confidence 99996544 4 45 566676 56899999999998 8999999999964
No 48
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=3.1e-34 Score=311.58 Aligned_cols=270 Identities=21% Similarity=0.325 Sum_probs=197.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC-CCCeEEEEc--------CCCCCCCCCchhhhc--------------------cc--
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVIS--------PRNYFAFTPLLPSVT--------------------CG-- 105 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~-~g~~Vtlie--------~~~~~~~~p~l~~~~--------------------~g-- 105 (583)
.+++|+|||||++|+++|..|++ .|++|+||| +.+.++++.....+. .|
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 35799999999999999999998 999999999 244455432211000 01
Q ss_pred ------cCCCcccc-----------hhHHHHHHhC-CCcEEEEEeEEEEEecCCCEEEEecC---CCCCCCCCceEEeec
Q 007975 106 ------TVEARSIV-----------EPVRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSS---QNTNLNGKEEFCMDY 164 (583)
Q Consensus 106 ------~~~~~~i~-----------~~~~~~~~~~-~i~v~~~~~~v~~id~~~~~v~~~~~---~~~~~~~~~~~~i~y 164 (583)
..+...+. ..+...+++. + ++++.++++.++. +.+.+... . +.+...+.|
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~g--v~~~~g~~~~i~~--~~v~v~~~~~~~-----g~~~~~~~~ 152 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEG--LTFHQGFGALQDN--HTVLVRESADPN-----SAVLETLDT 152 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTT--EEEEESEEEEEET--TEEEEESSSSTT-----SCEEEEEEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cEEEEeEEEEeeC--CEEEEEeeccCC-----CCceEEEEc
Confidence 01111111 1233445555 6 7788899998875 46776521 1 100138999
Q ss_pred CEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHH
Q 007975 165 DYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHD 244 (583)
Q Consensus 165 D~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~ 244 (583)
|+||||||++|..|++||. ++. .+.+++.. +. ...++++|||||++|+|+|..+.+
T Consensus 153 d~lviAtGs~p~~p~i~g~-~~~---~~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~ 208 (490)
T 1fec_A 153 EYILLATGSWPQHLGIEGD-DLC---ITSNEAFY-------------LD-------EAPKRALCVGGGYISIEFAGIFNA 208 (490)
T ss_dssp EEEEECCCEEECCCCSBTG-GGC---BCHHHHTT-------------CS-------SCCSEEEEECSSHHHHHHHHHHHH
T ss_pred CEEEEeCCCCCCCCCCCCc-cce---ecHHHHhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHh
Confidence 9999999999999999987 332 23333221 11 134599999999999999999987
Q ss_pred hhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCC---eEEEEEcCCCeeEE
Q 007975 245 FVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK---EIFTKVRGNGETSS 321 (583)
Q Consensus 245 ~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~---~v~~~~~~~G~~~~ 321 (583)
+. +++.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ .+.+.. .+|++
T Consensus 209 ~~-----------~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~-~~G~~-- 274 (490)
T 1fec_A 209 YK-----------ARGGQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVF-ESGAE-- 274 (490)
T ss_dssp HS-----------CTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEE-TTSCE--
T ss_pred hc-----------cCcCeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEE-CCCcE--
Confidence 62 12579999999999999999999999999999999999999999999743 255543 45764
Q ss_pred eecceEEEccCCCCchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 322 MPYGMVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 322 i~~D~vI~a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+++|.||+|+|.++ ++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 275 i~~D~vv~a~G~~p--~~~~L~l~~~gl~~~~~G~I~Vd~~~~t-~~~~IyA~GD~~~ 329 (490)
T 1fec_A 275 ADYDVVMLAIGRVP--RSQTLQLEKAGVEVAKNGAIKVDAYSKT-NVDNIYAIGDVTD 329 (490)
T ss_dssp EEESEEEECSCEEE--SCTTSCGGGGTCCBCTTSCBCCCTTCBC-SSTTEEECGGGGC
T ss_pred EEcCEEEEccCCCc--CccccCchhcCccCCCCCCEEECCCCcc-CCCCEEEEeccCC
Confidence 99999999999654 44334 566676 56899999999998 8999999999974
No 49
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.7e-34 Score=297.02 Aligned_cols=261 Identities=13% Similarity=0.218 Sum_probs=194.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc--hhhh----cccc--CCCcccchhHHHHHHhCCCcEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL--LPSV----TCGT--VEARSIVEPVRNIVRKKNVDICF 129 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~--l~~~----~~g~--~~~~~i~~~~~~~~~~~~i~v~~ 129 (583)
+++|||||||+||+++|..|++.|++|+|||+++.+++... .+.. ..+. ....++...+.+.+.+.++++.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 85 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTIC- 85 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEE-
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEE-
Confidence 57999999999999999999999999999999987653221 0000 1111 1234566677788887875543
Q ss_pred EEeEEEEEecCCC---EEEEecCCCCCCCCCceEEeecCEEEEccCC---CCCCCCCCCcccc---CcccCCHHHHHHHH
Q 007975 130 WEAECFKIDAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA---RANTFNTPGVEEN---CNFLKEVEDAQRIR 200 (583)
Q Consensus 130 ~~~~v~~id~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~---~~~~~~ipG~~~~---~~~~~~~~~a~~l~ 200 (583)
.+++|+.++.+.+ .|.+.++ ++.||+||+|||+ .|..+++||.+.. .... ...
T Consensus 86 ~~~~v~~i~~~~~~~~~v~~~~g-----------~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~------ 147 (332)
T 3lzw_A 86 LEQAVESVEKQADGVFKLVTNEE-----------THYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVD------ 147 (332)
T ss_dssp CSCCEEEEEECTTSCEEEEESSE-----------EEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCS------
T ss_pred ccCEEEEEEECCCCcEEEEECCC-----------EEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecC------
Confidence 3789999999876 4544321 5899999999999 8888899997641 1111 111
Q ss_pred HHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHH
Q 007975 201 RNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRI 280 (583)
Q Consensus 201 ~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~ 280 (583)
.....++++++|||+|++|+|+|..+.+. +.+|+++++.+++.+. ++.
T Consensus 148 ----------------~~~~~~~~~v~vvG~g~~~~e~a~~l~~~--------------~~~v~~~~~~~~~~~~-~~~- 195 (332)
T 3lzw_A 148 ----------------DLQKFAGRRVAILGGGDSAVDWALMLEPI--------------AKEVSIIHRRDKFRAH-EHS- 195 (332)
T ss_dssp ----------------CGGGGBTCEEEEECSSHHHHHHHHHHTTT--------------BSEEEEECSSSSCSSC-HHH-
T ss_pred ----------------CHHHcCCCEEEEECCCHhHHHHHHHHHhh--------------CCeEEEEEecCcCCcc-HHH-
Confidence 11112467999999999999999998765 4699999999887543 222
Q ss_pred HHHHHHHHHhCCCEEEeCCeEEEEeCCe----EEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc-CCCcceE
Q 007975 281 TAFAEEKFSRDGIDVKLGSMVVKVTDKE----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALA 355 (583)
Q Consensus 281 ~~~~~~~L~~~GV~v~~~~~V~~v~~~~----v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~-~~~g~i~ 355 (583)
.+.|++.||+++++++|++++.+. +++.+..+|+..++++|.||||+|..++. .+++.+++ ..+|+|.
T Consensus 196 ----~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~---~~~~~~~~~~~~g~i~ 268 (332)
T 3lzw_A 196 ----VENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSL---GPIKNWGLDIEKNSIV 268 (332)
T ss_dssp ----HHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCC---GGGGGSSCCEETTEEE
T ss_pred ----HHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCc---hHHhhcCccccCCeEE
Confidence 355889999999999999998653 77776555555579999999999976654 35666666 4678999
Q ss_pred eCCCCccCCCCCEEEcCccccc
Q 007975 356 TDEWLRVEGSDSIYALGDCATV 377 (583)
Q Consensus 356 Vd~~l~~~~~~~VyAiGD~a~~ 377 (583)
||+++|+ +.|+|||+|||+..
T Consensus 269 vd~~~~t-~~~~vya~GD~~~~ 289 (332)
T 3lzw_A 269 VKSTMET-NIEGFFAAGDICTY 289 (332)
T ss_dssp CCTTSBC-SSTTEEECGGGEEC
T ss_pred eCCCCce-ecCCEEEccceecC
Confidence 9999998 89999999999864
No 50
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=3.4e-34 Score=310.90 Aligned_cols=272 Identities=18% Similarity=0.276 Sum_probs=190.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCch----hh---------------hc-ccc------CCCcc
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PS---------------VT-CGT------VEARS 111 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l----~~---------------~~-~g~------~~~~~ 111 (583)
.++|||||||+||+++|..|++.|++|+|||+++.+++.++. +. .. .|. .+...
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 579999999999999999999999999999998766533211 10 00 010 01111
Q ss_pred cc-----------hhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEe--cCCC-C-CCCCCceEEeecCEEEEccCCCCC
Q 007975 112 IV-----------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCR--SSQN-T-NLNGKEEFCMDYDYLVIAMGARAN 176 (583)
Q Consensus 112 i~-----------~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~--~~~~-~-~~~~~~~~~i~yD~LViAtG~~~~ 176 (583)
+. ..+...+++.+ ++++.+++..++. +.+.+. ++.. . ...+++..++.||+||+|||+.|.
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~--~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~ 161 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRK--VDVIQGDGQFLDP--HHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVT 161 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--CEEEEEEEEEEET--TEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--cEEEeeEEEEccC--CEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCC
Confidence 11 11334556667 4556666666654 455543 2200 0 000001137999999999999988
Q ss_pred CCC-CCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcC
Q 007975 177 TFN-TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYP 255 (583)
Q Consensus 177 ~~~-ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p 255 (583)
.++ +| .+. .+.+.+++..+ . ..+++++|||||++|+|+|..+.++
T Consensus 162 ~~~~i~-~~~---~v~~~~~~~~~-------------~-------~~~~~vvViGgG~ig~E~A~~l~~~---------- 207 (482)
T 1ojt_A 162 KLPFIP-EDP---RIIDSSGALAL-------------K-------EVPGKLLIIGGGIIGLEMGTVYSTL---------- 207 (482)
T ss_dssp CCSSCC-CCT---TEECHHHHTTC-------------C-------CCCSEEEEESCSHHHHHHHHHHHHH----------
T ss_pred CCCCCC-ccC---cEEcHHHHhcc-------------c-------ccCCeEEEECCCHHHHHHHHHHHHc----------
Confidence 776 55 322 23344443221 1 1346999999999999999999886
Q ss_pred CCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcC--C-CeeEEeecceEEEc
Q 007975 256 KVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRG--N-GETSSMPYGMVVWS 330 (583)
Q Consensus 256 ~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~--~-G~~~~i~~D~vI~a 330 (583)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. +.+.+...+ + |++ +++|.||||
T Consensus 208 ----G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~--~~~D~vv~a 281 (482)
T 1ojt_A 208 ----GSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEP--QRYDAVLVA 281 (482)
T ss_dssp ----TCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSC--EEESCEEEC
T ss_pred ----CCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceE--EEcCEEEEC
Confidence 57999999999999999999999999999999999999999999974 344443211 1 443 889999999
Q ss_pred cCCCCchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 331 TGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 331 ~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+|.+ |++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 282 ~G~~--p~~~~l~~~~~gl~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 327 (482)
T 1ojt_A 282 AGRA--PNGKLISAEKAGVAVTDRGFIEVDKQMRT-NVPHIYAIGDIVG 327 (482)
T ss_dssp CCEE--ECGGGTTGGGTTCCCCTTSCCCCCTTSBC-SSTTEEECGGGTC
T ss_pred cCCC--cCCCCCChhhcCceeCCCCCEeeCCCccc-CCCCEEEEEcccC
Confidence 9955 444333 566676 56789999999998 8999999999985
No 51
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=2.4e-34 Score=310.57 Aligned_cols=263 Identities=17% Similarity=0.305 Sum_probs=192.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc----hhhh----------------cccc-----CCCccc
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSV----------------TCGT-----VEARSI 112 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~----l~~~----------------~~g~-----~~~~~i 112 (583)
+++|||||||+||+++|..|++.|++|+|||+++ ++++.. .|.. ..|. .+...+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 84 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKL 84 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHH
Confidence 5799999999999999999999999999999987 333211 1110 0010 111111
Q ss_pred ch-----------hHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCC-C
Q 007975 113 VE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN-T 180 (583)
Q Consensus 113 ~~-----------~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~-i 180 (583)
.. .+..++++.+ ++++.+++..++. +.|.+. +. ++.||+||+|||++|..++ +
T Consensus 85 ~~~~~~~~~~l~~~~~~~~~~~g--v~~~~g~~~~~~~--~~v~v~-g~----------~~~~d~lViATGs~p~~p~gi 149 (464)
T 2eq6_A 85 GGWRDQVVKKLTGGVGTLLKGNG--VELLRGFARLVGP--KEVEVG-GE----------RYGAKSLILATGSEPLELKGF 149 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEEEET--TEEEET-TE----------EEEEEEEEECCCEEECCBTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CEEEeeeEEEccC--CEEEEc-cE----------EEEeCEEEEcCCCCCCCCCCC
Confidence 11 1234556666 5567777777764 577764 21 7999999999999988775 6
Q ss_pred CCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCC
Q 007975 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (583)
Q Consensus 181 pG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~ 260 (583)
|| ++. +.+.+++..+++ ..+++++|||||++|+|+|..+.++ +
T Consensus 150 ~~-~~~---v~~~~~~~~l~~-------------------~~~~~vvViGgG~~g~e~A~~l~~~--------------g 192 (464)
T 2eq6_A 150 PF-GED---VWDSTRALKVEE-------------------GLPKRLLVIGGGAVGLELGQVYRRL--------------G 192 (464)
T ss_dssp CC-SSS---EECHHHHTCGGG-------------------CCCSEEEEECCSHHHHHHHHHHHHT--------------T
T ss_pred CC-CCc---EEcHHHHHhhhh-------------------hcCCEEEEECCCHHHHHHHHHHHHC--------------C
Confidence 66 222 234444432211 0235999999999999999998875 5
Q ss_pred ceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCC--CeeEEeecceEEEccCCCCc
Q 007975 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGN--GETSSMPYGMVVWSTGIAPH 336 (583)
Q Consensus 261 ~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~--G~~~~i~~D~vI~a~G~~~~ 336 (583)
.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. +.+.+....+ |+..++++|.||+|+|.+++
T Consensus 193 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 193 AEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 7999999999999999999999999999999999999999999974 3444443213 65335999999999996544
Q ss_pred hhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 337 p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 273 --~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 312 (464)
T 2eq6_A 273 --TEGLGLEKAGVKVDERGFIRVNARMET-SVPGVYAIGDAAR 312 (464)
T ss_dssp --CTTSSHHHHTCCBCTTSCBCCCTTCBC-SSTTEEECGGGTC
T ss_pred --CCCCChhhcCceecCCCCEEECCCccc-CCCCEEEEeccCC
Confidence 4222 566676 56889999999998 8999999999975
No 52
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=9e-34 Score=289.43 Aligned_cols=264 Identities=14% Similarity=0.118 Sum_probs=185.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCCCCCCCCch----hhhc--cccCCCcccchhHHHHHHhCCCcEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAFTPLL----PSVT--CGTVEARSIVEPVRNIVRKKNVDICFW 130 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~~~~~~p~l----~~~~--~g~~~~~~i~~~~~~~~~~~~i~v~~~ 130 (583)
+++|+|||||++|+++|..|++.|+ +|+|||++. .+..... ..+. .......++...+.+.+.+.+++ ++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~--~~ 77 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLK--HE 77 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCE--EE
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCcccccccccccCCCCcccCCHHHHHHHHHHHHHHcCCE--EE
Confidence 3689999999999999999998999 999999963 2221110 0010 11123345566677777777754 45
Q ss_pred EeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHHHHHHHHH
Q 007975 131 EAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFEK 209 (583)
Q Consensus 131 ~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~~~~~~ 209 (583)
.++|+.++.+.+.+.+.... + .++.||+||+|+|+.|..+++||.+++. ..+.......
T Consensus 78 ~~~v~~i~~~~~~~~v~~~~-----g---~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~~------------ 137 (311)
T 2q0l_A 78 MTAVQRVSKKDSHFVILAED-----G---KTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATCD------------ 137 (311)
T ss_dssp CSCEEEEEEETTEEEEEETT-----S---CEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHHH------------
T ss_pred EEEEEEEEEcCCEEEEEEcC-----C---CEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecCC------------
Confidence 58999999887744432221 1 1799999999999999989999875321 0111111100
Q ss_pred cCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHH
Q 007975 210 ASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFS 289 (583)
Q Consensus 210 ~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~ 289 (583)
.....+++|+|||+|++|+|+|..+.+. +.+|+++++.+++. .++. +.+.+.
T Consensus 138 --------~~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~--~~~~----~~~~l~ 189 (311)
T 2q0l_A 138 --------GFFYKNKEVAVLGGGDTAVEEAIYLANI--------------CKKVYLIHRRDGFR--CAPI----TLEHAK 189 (311)
T ss_dssp --------GGGGTTSEEEEECCSHHHHHHHHHHHTT--------------SSEEEEECSSSSCC--SCHH----HHHHHH
T ss_pred --------hhhcCCCEEEEECCCHHHHHHHHHHHhc--------------CCEEEEEeeCCccC--CCHH----HHHHHh
Confidence 0012456999999999999999998875 57999999998763 3333 334454
Q ss_pred -hCCCEEEeCCeEEEEeCC-----eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhC----c--CCCcceEeC
Q 007975 290 -RDGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVG----Q--TNRRALATD 357 (583)
Q Consensus 290 -~~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~----~--~~~g~i~Vd 357 (583)
+.||+++++++|++++++ .+++....+|+..++++|.||||+|..++. .+++.++ + +.+|+|.||
T Consensus 190 ~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~g~~~~l~~~~~g~i~vd 266 (311)
T 2q0l_A 190 NNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNN---AVLKQEDNSMLCKCDEYGSIVVD 266 (311)
T ss_dssp TCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECC---GGGBCTTSCBSSCBCTTSCBCCC
T ss_pred hCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccCh---hhhhcccccceeEeccCCCEEeC
Confidence 479999999999999753 355554335765569999999999965543 3444443 4 567999999
Q ss_pred CCCccCCCCCEEEcCcccc
Q 007975 358 EWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 358 ~~l~~~~~~~VyAiGD~a~ 376 (583)
+++|+ +.|+|||+|||+.
T Consensus 267 ~~~~t-~~~~vya~GD~~~ 284 (311)
T 2q0l_A 267 FSMKT-NVQGLFAAGDIRI 284 (311)
T ss_dssp TTCBC-SSTTEEECSTTBT
T ss_pred Ccccc-CCCCeEEcccccC
Confidence 99998 8999999999986
No 53
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=7.1e-34 Score=291.49 Aligned_cols=264 Identities=16% Similarity=0.219 Sum_probs=188.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhh---hccc--cCCCcccchhHHHHHHhCCCcEEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPS---VTCG--TVEARSIVEPVRNIVRKKNVDICFWE 131 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~---~~~g--~~~~~~i~~~~~~~~~~~~i~v~~~~ 131 (583)
..++|+|||||++|+++|..|++.|++|+|||+.. .+....... ..++ .....++...+.+.+.+.+ ++++.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~ 91 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLTAEAPLVENYLGFKSIVGSELAKLFADHAANYA--KIREG 91 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTS--EEEET
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCccccccchhhhcCCCcccCHHHHHHHHHHHHHHcC--CEEEE
Confidence 35799999999999999999999999999999953 222111100 0011 1222345555667777777 55666
Q ss_pred eEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHHHHHHHHHc
Q 007975 132 AECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFEKA 210 (583)
Q Consensus 132 ~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~~~~~~~ 210 (583)
++|+.++.+.+.+.+.... .++.||+||+|+|+.|..+++||.+++. ..+...... +
T Consensus 92 ~~v~~i~~~~~~~~v~~~~---------~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~--------~----- 149 (319)
T 3cty_A 92 VEVRSIKKTQGGFDIETND---------DTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTC--------D----- 149 (319)
T ss_dssp CCEEEEEEETTEEEEEESS---------SEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH--------H-----
T ss_pred eeEEEEEEeCCEEEEEECC---------CEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEec--------c-----
Confidence 8999999877754443321 1789999999999999988898875321 111111100 0
Q ss_pred CCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHh
Q 007975 211 SLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSR 290 (583)
Q Consensus 211 ~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~ 290 (583)
.....+++++|||+|++|+|+|..|.++ +.+|+++++.+.+.. ++ .+.+.+++
T Consensus 150 -------~~~~~~~~v~viG~G~~g~e~a~~l~~~--------------g~~V~~i~~~~~~~~--~~----~l~~~l~~ 202 (319)
T 3cty_A 150 -------GYLFKGKRVVTIGGGNSGAIAAISMSEY--------------VKNVTIIEYMPKYMC--EN----AYVQEIKK 202 (319)
T ss_dssp -------GGGGBTSEEEEECCSHHHHHHHHHHTTT--------------BSEEEEECSSSSCCS--CH----HHHHHHHH
T ss_pred -------hhhcCCCeEEEECCCHHHHHHHHHHHhh--------------CCcEEEEEcCCccCC--CH----HHHHHHhc
Confidence 0012457999999999999999998765 479999999887643 23 34566778
Q ss_pred CCCEEEeCCeEEEEeCC-----eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc--CCCcceEeCCCCccC
Q 007975 291 DGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVE 363 (583)
Q Consensus 291 ~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~ 363 (583)
.||+++++++|++++++ ++++.+..+|+..++++|.||||+|..++. .++..+++ +.+|+|.||+++|+
T Consensus 203 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~gl~~~~~g~i~vd~~~~t- 278 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQT---SFLKDSGVKLDERGYIVVDSRQRT- 278 (319)
T ss_dssp TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECC---GGGTTSCCCBCTTSCBCCCTTCBC-
T ss_pred CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccCh---HHHhhccccccCCccEeCCCCCcc-
Confidence 99999999999999754 355554335765569999999999966553 35555555 66799999999997
Q ss_pred CCCCEEEcCcccc
Q 007975 364 GSDSIYALGDCAT 376 (583)
Q Consensus 364 ~~~~VyAiGD~a~ 376 (583)
+.|+|||+|||+.
T Consensus 279 ~~~~vya~GD~~~ 291 (319)
T 3cty_A 279 SVPGVYAAGDVTS 291 (319)
T ss_dssp SSTTEEECSTTBT
T ss_pred CCCCEEEeecccC
Confidence 8999999999985
No 54
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=9e-34 Score=308.07 Aligned_cols=269 Identities=17% Similarity=0.255 Sum_probs=194.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC--------CCCCCCCchhhhc--------------------cc---
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR--------NYFAFTPLLPSVT--------------------CG--- 105 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~--------~~~~~~p~l~~~~--------------------~g--- 105 (583)
..++|+|||||+||++||..|++.|++|+|||++ ..++++++...+. .|
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 4589999999999999999999999999999973 3344432111000 00
Q ss_pred ----cCCCcccch-----------hHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEc
Q 007975 106 ----TVEARSIVE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIA 170 (583)
Q Consensus 106 ----~~~~~~i~~-----------~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViA 170 (583)
..+...+.. .+...++..+ ++++.+++..+++....|...++ +..++.||+||||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--V~~i~g~~~~~~~~~v~v~~~~g--------~~~~~~~d~lViA 154 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRK--VKYFNIKASFVDEHTVRGVDKGG--------KATLLSAEHIVIA 154 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECCEEEESSSSEEEEECTTS--------CEEEEEEEEEEEC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEccCCeEEEEeCCC--------ceEEEECCEEEEc
Confidence 111111111 1233455566 66789999888765444433222 1348999999999
Q ss_pred cCCCCCCCC-CCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHh
Q 007975 171 MGARANTFN-TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDED 249 (583)
Q Consensus 171 tG~~~~~~~-ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~ 249 (583)
||+.|..|+ +||.+++.+ +.+++.. +. ...++++|||||++|+|+|..+.++
T Consensus 155 TGs~p~~p~~i~G~~~~~~---~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~---- 207 (488)
T 3dgz_A 155 TGGRPRYPTQVKGALEYGI---TSDDIFW-------------LK-------ESPGKTLVVGASYVALECAGFLTGI---- 207 (488)
T ss_dssp CCEEECCCSSCBTHHHHCB---CHHHHTT-------------CS-------SCCCSEEEECCSHHHHHHHHHHHHT----
T ss_pred CCCCCCCCCCCCCcccccC---cHHHHHh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHHc----
Confidence 999999998 999755432 2222211 11 2345899999999999999999886
Q ss_pred HhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC---Ce--EEEEEcCCCeeEEeec
Q 007975 250 LFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD---KE--IFTKVRGNGETSSMPY 324 (583)
Q Consensus 250 ~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~~--v~~~~~~~G~~~~i~~ 324 (583)
+.+|+++++. .+++.+++++.+.+.+.|+++||++++++.|++++. +. +++.+..+|+..++++
T Consensus 208 ----------g~~Vtlv~~~-~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~ 276 (488)
T 3dgz_A 208 ----------GLDTTVMMRS-IPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTF 276 (488)
T ss_dssp ----------TCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEE
T ss_pred ----------CCceEEEEcC-cccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEEC
Confidence 5799999986 588899999999999999999999999999999963 33 4444433466556899
Q ss_pred ceEEEccCCCCchhHHHH-HHHhCc--C-CCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 325 GMVVWSTGIAPHAIIKDF-MKQVGQ--T-NRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 325 D~vI~a~G~~~~p~~~~l-~~~~~~--~-~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
|.||||+|..+ ++..+ ++..++ + .+|+|.||+++|| +.|+|||+|||+.
T Consensus 277 D~vi~a~G~~p--~~~~l~l~~~g~~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 329 (488)
T 3dgz_A 277 DTVLWAIGRVP--ETRTLNLEKAGISTNPKNQKIIVDAQEAT-SVPHIYAIGDVAE 329 (488)
T ss_dssp SEEEECSCEEE--SCGGGTGGGGTCCBCSSSCCBCCCTTSBC-SSTTEEECGGGBT
T ss_pred CEEEEcccCCc--ccCcCCccccCcEecCCCCeEeECCCCcc-CCCCEEEeEEecC
Confidence 99999999654 44333 456666 5 6799999999998 8999999999974
No 55
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=1.7e-33 Score=303.68 Aligned_cols=261 Identities=21% Similarity=0.324 Sum_probs=194.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCch----hhh---------------c-ccc------CCCc
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSV---------------T-CGT------VEAR 110 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l----~~~---------------~-~g~------~~~~ 110 (583)
++++|+|||||++|+++|..|++.|++|+|||+++ +++++.. |.. . .+. .+..
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~ 81 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWP 81 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHH
Confidence 35799999999999999999999999999999984 3332211 100 0 010 0111
Q ss_pred c-----------cchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCC
Q 007975 111 S-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (583)
Q Consensus 111 ~-----------i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ 179 (583)
. +...+...+.+.+ ++++.+++..++. +.|.+ ++ .++.||+||||||+.|..|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~--~~v~~-~g----------~~~~~d~lviAtGs~p~~p~ 146 (463)
T 2r9z_A 82 RLVAGRDRYIGAINSFWDGYVERLG--ITRVDGHARFVDA--HTIEV-EG----------QRLSADHIVIATGGRPIVPR 146 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEEEET--TEEEE-TT----------EEEEEEEEEECCCEEECCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC--CEEEEeEEEEccC--CEEEE-CC----------EEEEcCEEEECCCCCCCCCC
Confidence 1 1112334455666 5677888887774 56766 22 17999999999999999999
Q ss_pred CCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCC
Q 007975 180 TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKD 259 (583)
Q Consensus 180 ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~ 259 (583)
+||. ++. .+.+++..+ . ...++++|||||++|+|+|..+.++
T Consensus 147 i~G~-~~~---~~~~~~~~~-------------~-------~~~~~vvVvGgG~~g~e~A~~l~~~-------------- 188 (463)
T 2r9z_A 147 LPGA-ELG---ITSDGFFAL-------------Q-------QQPKRVAIIGAGYIGIELAGLLRSF-------------- 188 (463)
T ss_dssp CTTG-GGS---BCHHHHHHC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHT--------------
T ss_pred CCCc-cce---ecHHHHhhh-------------h-------ccCCEEEEECCCHHHHHHHHHHHhc--------------
Confidence 9997 332 233333221 0 1245999999999999999999876
Q ss_pred CceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCch
Q 007975 260 SVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHA 337 (583)
Q Consensus 260 ~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p 337 (583)
+.+|+++++.+++++.+++.+.+.+.+.|++.||+++++++|++++. +++.+.. .+|+. ++++|.||+|+|.++
T Consensus 189 G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~-~~G~~-~i~~D~vv~a~G~~p-- 264 (463)
T 2r9z_A 189 GSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVA-QDGTR-LEGFDSVIWAVGRAP-- 264 (463)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEE-TTCCE-EEEESEEEECSCEEE--
T ss_pred CCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEE-eCCcE-EEEcCEEEECCCCCc--
Confidence 57999999999999999999999999999999999999999999974 4455543 45762 399999999999654
Q ss_pred hHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 338 IIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 338 ~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 265 ~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 305 (463)
T 2r9z_A 265 NTRDLGLEAAGIEVQSNGMVPTDAYQNT-NVPGVYALGDITG 305 (463)
T ss_dssp SCTTSCHHHHTCCCCTTSCCCCCTTSBC-SSTTEEECGGGGT
T ss_pred CCCCCCchhcCCccCCCCCEeECCCCcc-CCCCEEEEeecCC
Confidence 44334 566666 56899999999998 8999999999974
No 56
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=7.1e-34 Score=296.62 Aligned_cols=264 Identities=17% Similarity=0.242 Sum_probs=191.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc--hhh----hccc--cCCCcccchhHHHHHHhCCCcEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL--LPS----VTCG--TVEARSIVEPVRNIVRKKNVDIC 128 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~--l~~----~~~g--~~~~~~i~~~~~~~~~~~~i~v~ 128 (583)
.+++|+|||||++|+++|..|++.|++|+|||+++.+++... .+. ...+ .....++...+.+.+...++++.
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 92 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVV 92 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEE
Confidence 457999999999999999999989999999999876643211 000 0001 11223455566677777775542
Q ss_pred EEEeEEEEEecCCC---EEEEecCCCCCCCCCceEEeecCEEEEccCC---CCCCCCCCC-ccccC-----cccCCHHHH
Q 007975 129 FWEAECFKIDAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA---RANTFNTPG-VEENC-----NFLKEVEDA 196 (583)
Q Consensus 129 ~~~~~v~~id~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~---~~~~~~ipG-~~~~~-----~~~~~~~~a 196 (583)
...+|+.++.+.+ .|.+.++. .+.||+||+|+|+ .|..+++|| .++.. +.+++.
T Consensus 93 -~~~~v~~i~~~~~~~~~v~~~~g~----------~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~--- 158 (360)
T 3ab1_A 93 -LNETVTKYTKLDDGTFETRTNTGN----------VYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSV--- 158 (360)
T ss_dssp -CSCCEEEEEECTTSCEEEEETTSC----------EEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCG---
T ss_pred -cCCEEEEEEECCCceEEEEECCCc----------EEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCH---
Confidence 4678999998654 44443322 7999999999999 566677787 54321 111111
Q ss_pred HHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcc
Q 007975 197 QRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMF 276 (583)
Q Consensus 197 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~ 276 (583)
....+++|+|||+|++|+|+|..|.+. +.+|+++++.+.+++.
T Consensus 159 ----------------------~~~~~~~vvVvG~G~~g~e~A~~l~~~--------------g~~V~lv~~~~~~~~~- 201 (360)
T 3ab1_A 159 ----------------------EDFKGKRVVIVGGGDSALDWTVGLIKN--------------AASVTLVHRGHEFQGH- 201 (360)
T ss_dssp ----------------------GGGTTCEEEEECSSHHHHHHHHHTTTT--------------SSEEEEECSSSSCSSC-
T ss_pred ----------------------HHcCCCcEEEECCCHHHHHHHHHHHhc--------------CCEEEEEEcCCCCCCC-
Confidence 012456999999999999999988764 5799999999887654
Q ss_pred cHHHHHHHHHHHHhCCCEEEeCCeEEEEeCC-----eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc-CC
Q 007975 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ-TN 350 (583)
Q Consensus 277 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~-~~ 350 (583)
+.+.+.+.+.+++.||+++++++|++++.+ .+++. ..+|+..++++|.||||+|+.++. .+++.+++ ..
T Consensus 202 -~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~-~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~~~~~~ 276 (360)
T 3ab1_A 202 -GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLR-SSDGSKWTVEADRLLILIGFKSNL---GPLARWDLELY 276 (360)
T ss_dssp -SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEE-ETTCCEEEEECSEEEECCCBCCSC---GGGGGSSCCEE
T ss_pred -HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEE-ecCCCeEEEeCCEEEECCCCCCCH---HHHHhhccccc
Confidence 356677788889999999999999999753 45554 235754469999999999976653 35556666 23
Q ss_pred CcceEeCCCCccCCCCCEEEcCccccc
Q 007975 351 RRALATDEWLRVEGSDSIYALGDCATV 377 (583)
Q Consensus 351 ~g~i~Vd~~l~~~~~~~VyAiGD~a~~ 377 (583)
+|+|.||+++|+ +.|+|||+|||+..
T Consensus 277 ~g~i~vd~~~~t-~~~~vya~GD~~~~ 302 (360)
T 3ab1_A 277 ENALVVDSHMKT-SVDGLYAAGDIAYY 302 (360)
T ss_dssp TTEEECCTTSBC-SSTTEEECSTTEEC
T ss_pred cCeeeecCCCcC-CCCCEEEecCccCC
Confidence 789999999998 89999999999874
No 57
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=1.2e-33 Score=289.64 Aligned_cols=266 Identities=18% Similarity=0.191 Sum_probs=190.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc-------hhhhccccCCCcccchhHHHHHHhCCCcEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL-------LPSVTCGTVEARSIVEPVRNIVRKKNVDICF 129 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~-------l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~ 129 (583)
++++|+|||||++|+++|..|++.|++|+|||+.. .+.... .+.+. ......++...+...+.+.++ ++
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~ 79 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGGQLTTTTEVENWPGDP-NDLTGPLLMERMHEHATKFET--EI 79 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTGGGGGCSBCCCSTTCC-SSCBHHHHHHHHHHHHHHTTC--EE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCceEecchhhhhCCCCC-CCCCHHHHHHHHHHHHHHCCC--EE
Confidence 45799999999999999999999999999999752 222111 01110 011223455666777777774 45
Q ss_pred EEeEEEEEecCCCEEEE-ecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHHHHHHH
Q 007975 130 WEAECFKIDAENKKVYC-RSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESF 207 (583)
Q Consensus 130 ~~~~v~~id~~~~~v~~-~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~~~~ 207 (583)
+.++|+.++.+.+.+.+ .++. .+.||+||+|+|+.|..+++||.++.. ..+.+... ...
T Consensus 80 ~~~~v~~i~~~~~~~~v~~~~~----------~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~------ 140 (320)
T 1trb_A 80 IFDHINKVDLQNRPFRLNGDNG----------EYTCDALIIATGASARYLGLPSEEAFKGRGVSACAT---SDG------ 140 (320)
T ss_dssp ECCCEEEEECSSSSEEEEESSC----------EEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHH---HHG------
T ss_pred EEeeeeEEEecCCEEEEEeCCC----------EEEcCEEEECCCCCcCCCCCCChHHhCCceeEeccc---CCc------
Confidence 66779999987776554 3222 799999999999999888888864321 11111110 000
Q ss_pred HHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHH
Q 007975 208 EKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEK 287 (583)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~ 287 (583)
....+++++|||+|++|+|+|..|.++ +.+|+++++.+.+.. ++.+.+.+.+.
T Consensus 141 -----------~~~~~~~v~ViG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~~--~~~~~~~l~~~ 193 (320)
T 1trb_A 141 -----------FFYRNQKVAVIGGGNTAVEEALYLSNI--------------ASEVHLIHRRDGFRA--EKILIKRLMDK 193 (320)
T ss_dssp -----------GGGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCC--CHHHHHHHHHH
T ss_pred -----------cccCCCeEEEECCCHHHHHHHHHHHhc--------------CCeEEEEEeCCcccc--CHHHHHHHHHh
Confidence 012456999999999999999998765 579999999987753 57788888899
Q ss_pred HHhCCCEEEeCCeEEEEeCCe-----EEEEEcCC-CeeEEeecceEEEccCCCCchhHHHHHH-HhCcCCCcceEeCCCC
Q 007975 288 FSRDGIDVKLGSMVVKVTDKE-----IFTKVRGN-GETSSMPYGMVVWSTGIAPHAIIKDFMK-QVGQTNRRALATDEWL 360 (583)
Q Consensus 288 L~~~GV~v~~~~~V~~v~~~~-----v~~~~~~~-G~~~~i~~D~vI~a~G~~~~p~~~~l~~-~~~~~~~g~i~Vd~~l 360 (583)
+++.||+++++++|++++.+. +++.+..+ |+..++++|.||||+|..++. .+++ .+.++ +|+|.||+++
T Consensus 194 l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~---~~~~~~l~~~-~G~i~vd~~~ 269 (320)
T 1trb_A 194 VENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNT---AIFEGQLELE-NGYIKVQSGI 269 (320)
T ss_dssp HHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESC---GGGTTTSCEE-TTEECCCCSS
T ss_pred cccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCCh---HHhccccccc-CceEEECCCc
Confidence 999999999999999997543 55554222 543469999999999976554 2333 23336 8999999997
Q ss_pred -----ccCCCCCEEEcCccccc
Q 007975 361 -----RVEGSDSIYALGDCATV 377 (583)
Q Consensus 361 -----~~~~~~~VyAiGD~a~~ 377 (583)
++ +.|+|||+|||+..
T Consensus 270 ~~~~~~t-~~~~vya~GD~~~~ 290 (320)
T 1trb_A 270 HGNATQT-SIPGVFAAGDVMDH 290 (320)
T ss_dssp SSCTTBC-SSTTEEECGGGGCS
T ss_pred ccccccC-CCCCEEEcccccCC
Confidence 55 89999999999863
No 58
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=3.5e-34 Score=310.53 Aligned_cols=266 Identities=20% Similarity=0.243 Sum_probs=195.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhh---------------c-----cc------cCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSV---------------T-----CG------TVEA 109 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~---------------~-----~g------~~~~ 109 (583)
+.+++|+|||||++|+++|..|++.|++|+|||++. ++++++...+ . .+ ..+.
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 96 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNW 96 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCH
Confidence 346899999999999999999999999999999773 3332111000 0 00 0000
Q ss_pred c-----------ccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 110 R-----------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 110 ~-----------~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
. .+...+...++..+ ++++.+++..++.....|.. ++ .++.||+||||||+.|..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~~~~~~~~v~~-~g----------~~~~~d~lviAtG~~p~~p 163 (478)
T 3dk9_A 97 RVIKEKRDAYVSRLNAIYQNNLTKSH--IEIIRGHAAFTSDPKPTIEV-SG----------KKYTAPHILIATGGMPSTP 163 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEECSCSSCEEEE-TT----------EEEECSCEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--cEEEEeEEEEeeCCeEEEEE-CC----------EEEEeeEEEEccCCCCCCC
Confidence 0 11122334455566 56788888888887767763 22 2799999999999999988
Q ss_pred ---CCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcC
Q 007975 179 ---NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYP 255 (583)
Q Consensus 179 ---~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p 255 (583)
++||.+ + ..+.++... +. ..+++++|||||++|+|+|..+.++
T Consensus 164 ~~~~i~G~~-~---~~~~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~---------- 209 (478)
T 3dk9_A 164 HESQIPGAS-L---GITSDGFFQ-------------LE-------ELPGRSVIVGAGYIAVEMAGILSAL---------- 209 (478)
T ss_dssp CTTTSTTGG-G---SBCHHHHTT-------------CC-------SCCSEEEEECCSHHHHHHHHHHHHT----------
T ss_pred CcCCCCCCc-e---eEchHHhhc-------------hh-------hcCccEEEECCCHHHHHHHHHHHHc----------
Confidence 899975 2 122222211 11 1246999999999999999999886
Q ss_pred CCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--Ce--EEEEEcC--CCee--EEeecceE
Q 007975 256 KVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE--IFTKVRG--NGET--SSMPYGMV 327 (583)
Q Consensus 256 ~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~--v~~~~~~--~G~~--~~i~~D~v 327 (583)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. ++ +.+...+ +|+. .++++|.|
T Consensus 210 ----g~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~v 285 (478)
T 3dk9_A 210 ----GSKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCL 285 (478)
T ss_dssp ----TCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEE
T ss_pred ----CCeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEE
Confidence 57999999999999999999999999999999999999999999973 33 4444321 1321 35999999
Q ss_pred EEccCCCCchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 328 VWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 328 I~a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
|||+|..+ ++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 286 i~a~G~~p--~~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~IyA~GD~~~ 334 (478)
T 3dk9_A 286 LWAIGRVP--NTKDLSLNKLGIQTDDKGHIIVDEFQNT-NVKGIYAVGDVCG 334 (478)
T ss_dssp EECSCEEE--SCTTSCGGGGTCCBCTTCCBCCCTTCBC-SSTTEEECGGGGC
T ss_pred EEeecccc--CCCCCCchhcCCeeCCCCCEeeCCCccc-CCCCEEEEEecCC
Confidence 99999654 44334 566666 67899999999998 8999999999984
No 59
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=2e-33 Score=286.65 Aligned_cols=261 Identities=18% Similarity=0.306 Sum_probs=185.4
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc----hhhhcc-ccCCCcccchhHHHHHHhCCCcEEEEEe-
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSVTC-GTVEARSIVEPVRNIVRKKNVDICFWEA- 132 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~----l~~~~~-g~~~~~~i~~~~~~~~~~~~i~v~~~~~- 132 (583)
++|+|||||++|+++|..|++.|++|+|||+. .++... ++.+.. ......++...+.+.+++.+ ++++.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~ 77 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGER--FGGQILDTVDIENYISVPKTEGQKLAGALKVHVDEYD--VDVIDSQ 77 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS--TTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHTSC--EEEECSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCC--CCceeccccccccccCcCCCCHHHHHHHHHHHHHHcC--CeEEccC
Confidence 68999999999999999999999999999864 222111 111110 11112345566777777777 555665
Q ss_pred EEEEEecCC-----CEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHHHHHH
Q 007975 133 ECFKIDAEN-----KKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIES 206 (583)
Q Consensus 133 ~v~~id~~~-----~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~~~ 206 (583)
+|+.++++. ..|.+.++. ++.||+||+|+|+.|..+++||.+++. ..+..... +.
T Consensus 78 ~v~~i~~~~~~~~~~~v~~~~g~----------~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~------ 138 (310)
T 1fl2_A 78 SASKLIPAAVEGGLHQIETASGA----------VLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPH---CD------ 138 (310)
T ss_dssp CEEEEECCSSTTCCEEEEETTSC----------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH---HH------
T ss_pred EEEEEEecccCCceEEEEECCCC----------EEEeCEEEECcCCCcCCCCCCChhhcccceeEEecc---Cc------
Confidence 899998752 345554332 789999999999999888999975421 11111111 00
Q ss_pred HHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHH
Q 007975 207 FEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEE 286 (583)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~ 286 (583)
.....+++|+|||+|++|+|+|..|... +.+|+++++.+++. +++ .+.+
T Consensus 139 -----------~~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~Vtlv~~~~~~~--~~~----~~~~ 187 (310)
T 1fl2_A 139 -----------GPLFKGKRVAVIGGGNSGVEAAIDLAGI--------------VEHVTLLEFAPEMK--ADQ----VLQD 187 (310)
T ss_dssp -----------GGGGBTCEEEEECCSHHHHHHHHHHHTT--------------BSEEEEECSSSSCC--SCH----HHHH
T ss_pred -----------HhhcCCCEEEEECCCHHHHHHHHHHHHh--------------CCEEEEEEeCcccC--ccH----HHHH
Confidence 0113467999999999999999998875 47999999998773 333 3456
Q ss_pred HHHh-CCCEEEeCCeEEEEeCC-----eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHH-hCcCCCcceEeCCC
Q 007975 287 KFSR-DGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQTNRRALATDEW 359 (583)
Q Consensus 287 ~L~~-~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~-~~~~~~g~i~Vd~~ 359 (583)
.|++ .||+++++++|++++++ ++++.+..+|++.++++|.||+|+|..++. .++.. +.++.+|+|.||++
T Consensus 188 ~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~l~~~l~~~~~g~i~vd~~ 264 (310)
T 1fl2_A 188 KLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNT---NWLEGAVERNRMGEIIIDAK 264 (310)
T ss_dssp HHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESC---GGGTTTSCBCTTSCBCCCTT
T ss_pred HHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCc---hHHhccccccCCCcEEcCCC
Confidence 6777 69999999999999754 456665445665579999999999966543 23332 33467899999999
Q ss_pred CccCCCCCEEEcCccccc
Q 007975 360 LRVEGSDSIYALGDCATV 377 (583)
Q Consensus 360 l~~~~~~~VyAiGD~a~~ 377 (583)
+|+ +.|+|||+|||+..
T Consensus 265 ~~t-~~~~vya~GD~~~~ 281 (310)
T 1fl2_A 265 CET-NVKGVFAAGDCTTV 281 (310)
T ss_dssp CBC-SSTTEEECSTTBSC
T ss_pred Ccc-CCCCEEEeecccCC
Confidence 997 89999999999863
No 60
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.8e-34 Score=311.83 Aligned_cols=267 Identities=20% Similarity=0.299 Sum_probs=196.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC---CCeEEEEcCCCCCCCCCc----hhh---------------hc-ccc--------
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP---SYDVQVISPRNYFAFTPL----LPS---------------VT-CGT-------- 106 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~---g~~Vtlie~~~~~~~~p~----l~~---------------~~-~g~-------- 106 (583)
+++|||||||++|+++|..|++. |++|+|||+++ ++++.. .|. +. .|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 47999999999999999999976 99999999987 433211 010 00 011
Q ss_pred CCCcc-----------cchhHHHHHHhCCCcEEEEEeEEEEEecC----CCEEEEecCCCCCCCCCceEEeecCEEEEcc
Q 007975 107 VEARS-----------IVEPVRNIVRKKNVDICFWEAECFKIDAE----NKKVYCRSSQNTNLNGKEEFCMDYDYLVIAM 171 (583)
Q Consensus 107 ~~~~~-----------i~~~~~~~~~~~~i~v~~~~~~v~~id~~----~~~v~~~~~~~~~~~~~~~~~i~yD~LViAt 171 (583)
.+... +...+.+++++.+ ++++.+++..++++ ++.+.+.... ++...+.||+||+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~~~~~~~~~~~V~~~~------g~~~~~~~d~lviAT 152 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMG--VQVIAGRGELIDSTPGLARHRIKATAAD------GSTSEHEADVVLVAT 152 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEEESEEEECCSSSCCSSEEEEEECTT------SCEEEEEESEEEECC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecCcccCCCCEEEEEeCC------CcEEEEEeCEEEEcC
Confidence 01111 1122456666777 55677888888873 2455554321 111379999999999
Q ss_pred CCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHh
Q 007975 172 GARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLF 251 (583)
Q Consensus 172 G~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~ 251 (583)
|+.|..+++||.+... +.+..++.. +. ...++++|||+|++|+|+|..+..+
T Consensus 153 Gs~p~~p~i~g~~~~~--v~~~~~~~~-------------~~-------~~~~~vvViGgG~ig~E~A~~l~~~------ 204 (499)
T 1xdi_A 153 GASPRILPSAQPDGER--ILTWRQLYD-------------LD-------ALPDHLIVVGSGVTGAEFVDAYTEL------ 204 (499)
T ss_dssp CEEECCCGGGCCCSSS--EEEGGGGGG-------------CS-------SCCSSEEEESCSHHHHHHHHHHHHT------
T ss_pred CCCCCCCCCCCCCcCc--EEehhHhhh-------------hh-------ccCCeEEEECCCHHHHHHHHHHHHc------
Confidence 9999988888875321 222222211 11 1346999999999999999999876
Q ss_pred hhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCC--eEEEEEcCCCeeEEeecceEEE
Q 007975 252 KLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVW 329 (583)
Q Consensus 252 ~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~ 329 (583)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+ ++.+.. .+|++ +++|.||+
T Consensus 205 --------g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~aD~Vv~ 273 (499)
T 1xdi_A 205 --------GVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTM-TDGRT--VEGSHALM 273 (499)
T ss_dssp --------TCCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEE-TTSCE--EEESEEEE
T ss_pred --------CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEE-CCCcE--EEcCEEEE
Confidence 579999999999999999999999999999999999999999999753 466654 45654 99999999
Q ss_pred ccCCCCchhHHHH--HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 330 STGIAPHAIIKDF--MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 330 a~G~~~~p~~~~l--~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
|+|.+++. .+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 274 a~G~~p~~---~~l~l~~~gl~~~~~G~i~Vd~~~~t-~~~~IyA~GD~~~ 320 (499)
T 1xdi_A 274 TIGSVPNT---SGLGLERVGIQLGRGNYLTVDRVSRT-LATGIYAAGDCTG 320 (499)
T ss_dssp CCCEEECC---SSSCTTTTTCCCBTTTBCCCCSSSBC-SSTTEEECSGGGT
T ss_pred CCCCCcCC---CcCCchhcCceECCCCCEEECCCccc-CCCCEEEEeccCC
Confidence 99965543 23 455666 56799999999998 8999999999975
No 61
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.1e-33 Score=304.89 Aligned_cols=260 Identities=22% Similarity=0.334 Sum_probs=190.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc----hhh---------------hc----cccC------C
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPS---------------VT----CGTV------E 108 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~----l~~---------------~~----~g~~------~ 108 (583)
+++|||||||+||++||..|++.|++|+|||+ +.+++++. .|. .. .|.. +
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLD 83 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccC
Confidence 57999999999999999999988999999999 44443221 110 00 1110 1
Q ss_pred Ccccc-----------hhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 109 ARSIV-----------EPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 109 ~~~i~-----------~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
...+. ..+..++++.+ ++++.+++..++ .+.|.+.+ .++.||+||||||++|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~~~--~~~v~v~~-----------~~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 84 IGQSVAWKDGIVDRLTTGVAALLKKHG--VKVVHGWAKVLD--GKQVEVDG-----------QRIQCEHLLLATGSSSVE 148 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSCEEEEE--TTEEEETT-----------EEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC--cEEEEEEEEEcc--CCEEEEee-----------EEEEeCEEEEeCCCCCCC
Confidence 11111 11335566677 556777777665 46777643 279999999999999876
Q ss_pred CC-CCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCC
Q 007975 178 FN-TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPK 256 (583)
Q Consensus 178 ~~-ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~ 256 (583)
++ +| .+. .+.+.+++..+ . ..+++++|||||++|+|+|..+.++
T Consensus 149 ~~~~~-~~~---~v~~~~~~~~~-------------~-------~~~~~vvViGgG~~g~e~A~~l~~~----------- 193 (458)
T 1lvl_A 149 LPMLP-LGG---PVISSTEALAP-------------K-------ALPQHLVVVGGGYIGLELGIAYRKL----------- 193 (458)
T ss_dssp BTTBC-CBT---TEECHHHHTCC-------------S-------SCCSEEEEECCSHHHHHHHHHHHHH-----------
T ss_pred CCCCC-ccC---cEecHHHHhhh-------------h-------ccCCeEEEECcCHHHHHHHHHHHHC-----------
Confidence 65 55 222 23344333211 1 1346999999999999999999876
Q ss_pred CCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCCc
Q 007975 257 VKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (583)
Q Consensus 257 ~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 336 (583)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++.+.+.+. ..+|+..++++|.||||+|.+++
T Consensus 194 ---g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~-~~~G~~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 194 ---GAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLAN-DGKGGQLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp ---TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEE-CSSSCCCEECCSCEEECCCEEEC
T ss_pred ---CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEE-ECCCceEEEECCEEEECcCCCcC
Confidence 57999999999999999999999999999999999999999999987556665 23463235999999999996554
Q ss_pred hhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 337 p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
. ..+ ++.+++ +.+ +|.||+++|+ +.|+|||+|||+.
T Consensus 270 ~--~~l~~~~~g~~~~~~-~i~vd~~~~t-~~~~Iya~GD~~~ 308 (458)
T 1lvl_A 270 T--KGFNLECLDLKMNGA-AIAIDERCQT-SMHNVWAIGDVAG 308 (458)
T ss_dssp C--SSSSGGGSCCCEETT-EECCCTTCBC-SSTTEEECGGGGC
T ss_pred C--CCCCcHhcCCcccCC-EEeECCCCcC-CCCCEEEeeccCC
Confidence 3 222 455666 455 8999999997 8999999999975
No 62
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.4e-33 Score=302.80 Aligned_cols=261 Identities=21% Similarity=0.286 Sum_probs=192.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCch----hhh---------------c-cc------cCCCc-
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSV---------------T-CG------TVEAR- 110 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l----~~~---------------~-~g------~~~~~- 110 (583)
.++|+|||||++|+++|..|++.|++|+|||+ +.++++... |.. . .+ ..+..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAK 83 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHH
Confidence 57999999999999999999999999999999 444432211 100 0 00 01111
Q ss_pred ----------ccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCC-CCC
Q 007975 111 ----------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARAN-TFN 179 (583)
Q Consensus 111 ----------~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~-~~~ 179 (583)
.+...+...+...+ ++++.+++..++. +.+.+... ...+.||+||+|||+.|. .++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~g--v~~~~g~~~~i~~--~~v~~~~~---------~~~~~~d~lviAtG~~p~~~p~ 150 (463)
T 4dna_A 84 LVAAKEQEIARLEGLYRKGLANAG--AEILDTRAELAGP--NTVKLLAS---------GKTVTAERIVIAVGGHPSPHDA 150 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--CEEEESCEEESSS--SEEEETTT---------TEEEEEEEEEECCCEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEEEEEEeeC--CEEEEecC---------CeEEEeCEEEEecCCCcccCCC
Confidence 11222344455556 5577888887764 56766311 128999999999999999 889
Q ss_pred CCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCC
Q 007975 180 TPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKD 259 (583)
Q Consensus 180 ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~ 259 (583)
+||.+ + +.+.++... +. ..+++++|||+|++|+|+|..+..+
T Consensus 151 i~G~~-~---~~~~~~~~~-------------~~-------~~~~~v~ViGgG~~g~e~A~~l~~~-------------- 192 (463)
T 4dna_A 151 LPGHE-L---CITSNEAFD-------------LP-------ALPESILIAGGGYIAVEFANIFHGL-------------- 192 (463)
T ss_dssp STTGG-G---CBCHHHHTT-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------
T ss_pred CCCcc-c---cccHHHHhh-------------hh-------cCCCeEEEECCCHHHHHHHHHHHHc--------------
Confidence 99974 2 223332211 11 2356999999999999999999876
Q ss_pred CceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--Ce-EEEEEcCCCeeEEeecceEEEccCCCCc
Q 007975 260 SVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (583)
Q Consensus 260 ~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~-v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 336 (583)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. ++ +.+..+.+|+ +++|.||+|+|.+++
T Consensus 193 g~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~---i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 193 GVKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE---IVADQVMLALGRMPN 269 (463)
T ss_dssp TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE---EEESEEEECSCEEES
T ss_pred CCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe---EEeCEEEEeeCcccC
Confidence 57999999999999999999999999999999999999999999975 33 4444134565 899999999996554
Q ss_pred hhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 337 p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+..+ ++.+++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 270 --~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~iya~GD~~~ 309 (463)
T 4dna_A 270 --TNGLGLEAAGVRTNELGAIIVDAFSRT-STPGIYALGDVTD 309 (463)
T ss_dssp --CTTSSTGGGTCCBCTTSCBCCCTTCBC-SSTTEEECSGGGS
T ss_pred --CCCCCccccCceECCCCCEeECcCCCC-CCCCEEEEEecCC
Confidence 3223 556666 67899999999997 8999999999975
No 63
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=8e-33 Score=300.25 Aligned_cols=268 Identities=21% Similarity=0.254 Sum_probs=192.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC---------CCCCCCchhhhc--------------------ccc
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN---------YFAFTPLLPSVT--------------------CGT 106 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~---------~~~~~p~l~~~~--------------------~g~ 106 (583)
...++|+|||||+||++||..|++.|++|+|||+.. .++++++...+. .|.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~ 86 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGW 86 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 346899999999999999999999999999999421 133322111000 010
Q ss_pred -------CCCcccch-----------hHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEE
Q 007975 107 -------VEARSIVE-----------PVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLV 168 (583)
Q Consensus 107 -------~~~~~i~~-----------~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LV 168 (583)
.+...+.. .+...++..+ ++++.+++..++.....|.+.++ .+.+.||+||
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~a~~~~~~~v~v~~~~g---------~~~~~~d~lv 155 (483)
T 3dgh_A 87 NVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKK--VEYINGLGSFVDSHTLLAKLKSG---------ERTITAQTFV 155 (483)
T ss_dssp CCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSEEEEEETTEEEEECTTC---------CEEEEEEEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEccCCEEEEEeCCC---------eEEEEcCEEE
Confidence 11111111 1223345565 66789999888865444433221 1479999999
Q ss_pred EccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhH
Q 007975 169 IAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDE 248 (583)
Q Consensus 169 iAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~ 248 (583)
||||+.|..|++||.+++.+ +.+++.. +. ...++++|||+|++|+|+|..+.++
T Consensus 156 iATGs~p~~p~i~G~~~~~~---~~~~~~~-------------~~-------~~~~~vvViGgG~~g~E~A~~l~~~--- 209 (483)
T 3dgh_A 156 IAVGGRPRYPDIPGAVEYGI---TSDDLFS-------------LD-------REPGKTLVVGAGYIGLECAGFLKGL--- 209 (483)
T ss_dssp ECCCEEECCCSSTTHHHHCB---CHHHHTT-------------CS-------SCCCEEEEECCSHHHHHHHHHHHHT---
T ss_pred EeCCCCcCCCCCCCcccccC---cHHHHhh-------------hh-------hcCCcEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999764432 2222211 11 2345999999999999999999886
Q ss_pred hHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--Ce---EEEEEcCCCeeEEee
Q 007975 249 DLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE---IFTKVRGNGETSSMP 323 (583)
Q Consensus 249 ~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~---v~~~~~~~G~~~~i~ 323 (583)
+.+|+++++ +.+++.+++++.+.+.+.|+++||+++++++|++++. ++ +++.+..+|+..+++
T Consensus 210 -----------g~~Vtlv~~-~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~ 277 (483)
T 3dgh_A 210 -----------GYEPTVMVR-SIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDV 277 (483)
T ss_dssp -----------TCEEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEE
T ss_pred -----------CCEEEEEeC-CCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEE
Confidence 579999998 5788999999999999999999999999999999974 32 444443334445699
Q ss_pred cceEEEccCCCCchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 324 YGMVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 324 ~D~vI~a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+|.||+|+|..++ +..+ ++..++ +. |+|.||+++|| +.|+|||+|||+.
T Consensus 278 ~D~vi~a~G~~p~--~~~l~l~~~gl~~~~-G~i~vd~~~~t-~~~~IyA~GD~~~ 329 (483)
T 3dgh_A 278 YDTVLWAIGRKGL--VDDLNLPNAGVTVQK-DKIPVDSQEAT-NVANIYAVGDIIY 329 (483)
T ss_dssp ESEEEECSCEEEC--CGGGTGGGTTCCCBT-TBBCCCTTCBC-SSTTEEECSTTBT
T ss_pred cCEEEECcccccC--cCcCCchhcCccccC-CEEEECcCCcc-CCCCEEEEEcccC
Confidence 9999999996544 4223 356666 45 99999999998 8999999999974
No 64
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=4.6e-33 Score=284.42 Aligned_cols=269 Identities=18% Similarity=0.206 Sum_probs=183.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC--chhhh-----ccc---cCCCcccchhHHHHHHhCCCc
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP--LLPSV-----TCG---TVEARSIVEPVRNIVRKKNVD 126 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p--~l~~~-----~~g---~~~~~~i~~~~~~~~~~~~i~ 126 (583)
.++||+||||||||++||.+|++.|++|+|||++...+..+ .++.. ..+ .....++...+...+.+.+.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~- 81 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGT- 81 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTC-
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCc-
Confidence 35899999999999999999999999999999875322211 11110 011 11223455666777777773
Q ss_pred EEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHHHHH
Q 007975 127 ICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIE 205 (583)
Q Consensus 127 v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~~ 205 (583)
.+...++..+....+........ ..++.||+||||||+.|+.+++||.+... ..+........
T Consensus 82 -~~~~~~v~~~~~~~~~~~~~~~~--------~~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~------- 145 (314)
T 4a5l_A 82 -TIITETIDHVDFSTQPFKLFTEE--------GKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDG------- 145 (314)
T ss_dssp -EEECCCEEEEECSSSSEEEEETT--------CCEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHT-------
T ss_pred -EEEEeEEEEeecCCCceEEEECC--------CeEEEEeEEEEcccccccccCCCccccccccceeeehhhhh-------
Confidence 45566777776665533332222 12899999999999999999999975321 11111111110
Q ss_pred HHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHH
Q 007975 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (583)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~ 285 (583)
.....++++++|||||++|+|+|..+.++ +.+||++++.+..... +. ...
T Consensus 146 -----------~~~~~~~~~vvViGgG~ig~e~A~~l~~~--------------G~~Vt~v~~~~~~~~~--~~---~~~ 195 (314)
T 4a5l_A 146 -----------AVPIFRNKVLMVVGGGDAAMEEALHLTKY--------------GSKVIILHRRDAFRAS--KT---MQE 195 (314)
T ss_dssp -----------TSGGGTTSEEEEECSSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCSC--HH---HHH
T ss_pred -----------hhhhcCCCeEEEECCChHHHHHHHHHHHh--------------CCeeeeeccccccccc--ch---hhh
Confidence 00113457999999999999999999876 5799999998776543 22 233
Q ss_pred HHHHhCCCEEEeCCeEEEEeC-----CeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHH-hCcCCCcceEeCCC
Q 007975 286 EKFSRDGIDVKLGSMVVKVTD-----KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQTNRRALATDEW 359 (583)
Q Consensus 286 ~~L~~~GV~v~~~~~V~~v~~-----~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~-~~~~~~g~i~Vd~~ 359 (583)
+.+...+++.+..+.+.++.. +++.+.....++..++++|.|++++|. .|++. ++.. +.++++|.+ ||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~--~pn~~-~l~~~~~~~~~G~i-v~~~ 271 (314)
T 4a5l_A 196 RVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGH--SPNSK-FLGGQVKTADDGYI-LTEG 271 (314)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCE--EESCG-GGTTSSCBCTTSCB-CCBT
T ss_pred hhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEeccc--ccChh-HhcccceEcCCeeE-eCCC
Confidence 556677899999888888863 235565544455557999999999995 45553 3322 223566655 8889
Q ss_pred CccCCCCCEEEcCccccc
Q 007975 360 LRVEGSDSIYALGDCATV 377 (583)
Q Consensus 360 l~~~~~~~VyAiGD~a~~ 377 (583)
+|| +.|+|||+|||+..
T Consensus 272 ~~T-s~pgIyA~GDv~~~ 288 (314)
T 4a5l_A 272 PKT-SVDGVFACGDVCDR 288 (314)
T ss_dssp TBC-SSTTEEECSTTTCS
T ss_pred Ccc-CCCCEEEEEeccCC
Confidence 998 89999999999864
No 65
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.2e-33 Score=285.72 Aligned_cols=265 Identities=17% Similarity=0.222 Sum_probs=183.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc-------hhhhccccCCCcccchhHHHHHHhCCCcEE
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL-------LPSVTCGTVEARSIVEPVRNIVRKKNVDIC 128 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~-------l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~ 128 (583)
+++++|+|||||++|+++|..|++.|++|+|||+.. .+.... .+.+. ......++...+.+.+.+.++ +
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~v--~ 87 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGGALMTTTDVENYPGFR-NGITGPELMDEMREQALRFGA--D 87 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSCGGGSCSCBCCSTTCT-TCBCHHHHHHHHHHHHHHTTC--E
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCceeccchhhhcCCCC-CCCCHHHHHHHHHHHHHHcCC--E
Confidence 456899999999999999999998999999999752 222110 01110 012223556667777777774 4
Q ss_pred EEEeEEEEEecCC-CEE-EEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHHHHH
Q 007975 129 FWEAECFKIDAEN-KKV-YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIE 205 (583)
Q Consensus 129 ~~~~~v~~id~~~-~~v-~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~~ 205 (583)
++.++|+.++..+ ..| .+.++. ++.||+||+|+|+.|..+++||..++. ..+.+... ...
T Consensus 88 ~~~~~v~~i~~~~~~~v~~~~~g~----------~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~---~~~---- 150 (335)
T 2a87_A 88 LRMEDVESVSLHGPLKSVVTADGQ----------THRARAVILAMGAAARYLQVPGEQELLGRGVSSCAT---CDG---- 150 (335)
T ss_dssp EECCCEEEEECSSSSEEEEETTSC----------EEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHH---HHG----
T ss_pred EEEeeEEEEEeCCcEEEEEeCCCC----------EEEeCEEEECCCCCccCCCCCchHhccCCceEEeec---cch----
Confidence 5566799998722 245 443322 799999999999999888899865321 11111111 000
Q ss_pred HHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHH
Q 007975 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (583)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~ 285 (583)
....+++|+|||+|++|+|+|..+.++ +.+|+++++.++++.. +.+ ..
T Consensus 151 -------------~~~~~~~v~ViG~G~~g~e~a~~l~~~--------------g~~V~l~~~~~~~~~~--~~~---~~ 198 (335)
T 2a87_A 151 -------------FFFRDQDIAVIGGGDSAMEEATFLTRF--------------ARSVTLVHRRDEFRAS--KIM---LD 198 (335)
T ss_dssp -------------GGGTTCEEEEECSSHHHHHHHHHHTTT--------------CSEEEEECSSSSCSSC--TTH---HH
T ss_pred -------------hhcCCCEEEEECCCHHHHHHHHHHHHh--------------CCeEEEEEcCCcCCcc--HHH---HH
Confidence 012456999999999999999998764 5799999999877532 111 12
Q ss_pred HHHHhCCCEEEeCCeEEEEeCCe----EEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHH-HhCcCCCcceEeCCCC
Q 007975 286 EKFSRDGIDVKLGSMVVKVTDKE----IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMK-QVGQTNRRALATDEWL 360 (583)
Q Consensus 286 ~~L~~~GV~v~~~~~V~~v~~~~----v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~-~~~~~~~g~i~Vd~~l 360 (583)
+.+++.||+++++++|++++++. +++.+..+|+..++++|.||||+|.+++. .+++ .+.++.+|+|.||+++
T Consensus 199 ~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~~~~~l~~~~~G~i~vd~~~ 275 (335)
T 2a87_A 199 RARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRS---GLVREAIDVDPDGYVLVQGRT 275 (335)
T ss_dssp HHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECC---TTTBTTBCBCTTSCBCCSTTS
T ss_pred HHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccCh---hHhhcccccCCCccEEeCCCC
Confidence 44567899999999999998654 77765334654469999999999976554 2332 2333678999999975
Q ss_pred ccCCCCCEEEcCcccc
Q 007975 361 RVEGSDSIYALGDCAT 376 (583)
Q Consensus 361 ~~~~~~~VyAiGD~a~ 376 (583)
+.++.|+|||+|||+.
T Consensus 276 ~~t~~~~iya~GD~~~ 291 (335)
T 2a87_A 276 TSTSLPGVFAAGDLVD 291 (335)
T ss_dssp SBCSSTTEEECGGGTC
T ss_pred CccCCCCEEEeeecCC
Confidence 3348999999999986
No 66
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=1.4e-33 Score=304.01 Aligned_cols=263 Identities=23% Similarity=0.361 Sum_probs=192.6
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCch----hhh---------------cccc------CCCccc-
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PSV---------------TCGT------VEARSI- 112 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l----~~~---------------~~g~------~~~~~i- 112 (583)
++|+|||||+||+++|..|++.|++|+|||+++.+++++.. |.. ..|. .+...+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALM 81 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHH
Confidence 68999999999999999999899999999999766543211 100 0010 011111
Q ss_pred ----------chhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCC
Q 007975 113 ----------VEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPG 182 (583)
Q Consensus 113 ----------~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG 182 (583)
...+...+++.+ ++++.+++..++. +.+.+.. . + .++.||+||+|||+.|..++++|
T Consensus 82 ~~~~~~~~~l~~~~~~~~~~~~--v~~~~g~~~~i~~--~~~~v~~-~-----g---~~~~~d~lviAtG~~p~~~~~~g 148 (455)
T 2yqu_A 82 AHKDKVVQANTQGVEFLFKKNG--IARHQGTARFLSE--RKVLVEE-T-----G---EELEARYILIATGSAPLIPPWAQ 148 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT--CEEEESCEEESSS--SEEEETT-T-----C---CEEEEEEEEECCCEEECCCTTBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecC--CeEEEee-C-----C---EEEEecEEEECCCCCCCCCCCCC
Confidence 111244555666 5566777766653 4565542 1 1 17999999999999999888888
Q ss_pred ccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCce
Q 007975 183 VEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVK 262 (583)
Q Consensus 183 ~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~ 262 (583)
.+.. .+.+.+++.. +. ..+++++|||||++|+|+|..+.++ +.+
T Consensus 149 ~~~~--~v~~~~~~~~-------------~~-------~~~~~vvIiGgG~~g~e~A~~l~~~--------------g~~ 192 (455)
T 2yqu_A 149 VDYE--RVVTSTEALS-------------FP-------EVPKRLIVVGGGVIGLELGVVWHRL--------------GAE 192 (455)
T ss_dssp CCSS--SEECHHHHTC-------------CS-------SCCSEEEEECCSHHHHHHHHHHHHT--------------TCE
T ss_pred CCcC--cEechHHhhc-------------cc-------cCCCeEEEECCCHHHHHHHHHHHHc--------------CCE
Confidence 6532 1223333211 11 1346999999999999999998875 579
Q ss_pred EEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCchhHH
Q 007975 263 ITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIK 340 (583)
Q Consensus 263 Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~ 340 (583)
|+++++.++++|.+++.+.+.+.+.+++.||+++++++|++++. +.+.+.. .+|++ +++|.||+|+|.+++. .
T Consensus 193 V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~~D~vv~A~G~~p~~--~ 267 (455)
T 2yqu_A 193 VIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVEL-EGGEV--LEADRVLVAVGRRPYT--E 267 (455)
T ss_dssp EEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECSCEEECC--T
T ss_pred EEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEE-CCCeE--EEcCEEEECcCCCcCC--C
Confidence 99999999999999999999999999999999999999999974 4566554 34654 9999999999965543 2
Q ss_pred HH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 341 DF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 341 ~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
.+ ++.+++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 268 ~l~~~~~g~~~~~~g~i~vd~~~~t-~~~~iya~GD~~~ 305 (455)
T 2yqu_A 268 GLSLENAGLSTDERGRIPVDEHLRT-RVPHIYAIGDVVR 305 (455)
T ss_dssp TCCGGGGTCCCCTTSCCCCCTTSBC-SSTTEEECGGGSS
T ss_pred CCChhhcCCccCCCCcEeECCCccc-CCCCEEEEecCCC
Confidence 22 455666 55789999999998 8999999999975
No 67
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=3.6e-33 Score=287.79 Aligned_cols=271 Identities=15% Similarity=0.185 Sum_probs=185.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcC----CCCCCCCCchh----hhc--cccCCCcccchhHHHHHHhCCCc
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISP----RNYFAFTPLLP----SVT--CGTVEARSIVEPVRNIVRKKNVD 126 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~----~~~~~~~p~l~----~~~--~g~~~~~~i~~~~~~~~~~~~i~ 126 (583)
.+++|+|||||++|+++|..|++.|++|+|||+ ....+...... ... ...+...++...+.+.+.+.+++
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~ 86 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTT 86 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCE
Confidence 357999999999999999999999999999998 33222211110 000 00112234556677777777744
Q ss_pred EEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC--cccCCHHHHHHHHHHHH
Q 007975 127 ICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC--NFLKEVEDAQRIRRNVI 204 (583)
Q Consensus 127 v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~--~~~~~~~~a~~l~~~l~ 204 (583)
++.++|+.++.+.+.+.+.. . + ..+.||+||+|+|+.|..+++||..+.. +....+.....+...+
T Consensus 87 --~~~~~v~~i~~~~~~~~v~~-~-----~---~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~- 154 (333)
T 1vdc_A 87 --IFTETVTKVDFSSKPFKLFT-D-----S---KAILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAA- 154 (333)
T ss_dssp --EECCCCCEEECSSSSEEEEC-S-----S---EEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTS-
T ss_pred --EEEeEEEEEEEcCCEEEEEE-C-----C---cEEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccch-
Confidence 55667999998776444432 1 1 2799999999999999988999875421 1111111111111000
Q ss_pred HHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHH
Q 007975 205 ESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFA 284 (583)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~ 284 (583)
....+++|+|||+|++|+|+|..|.+. +.+|+++++.+.+.. .+.+ .
T Consensus 155 --------------~~~~~~~v~VvG~G~~g~e~A~~l~~~--------------g~~V~lv~~~~~~~~--~~~~---~ 201 (333)
T 1vdc_A 155 --------------PIFRNKPLAVIGGGDSAMEEANFLTKY--------------GSKVYIIHRRDAFRA--SKIM---Q 201 (333)
T ss_dssp --------------GGGTTSEEEEECCSHHHHHHHHHHTTT--------------SSEEEEECSSSSCCS--CHHH---H
T ss_pred --------------hhcCCCeEEEECCChHHHHHHHHHHhc--------------CCeEEEEecCCcCCc--cHHH---H
Confidence 013457999999999999999998764 579999999987643 2222 2
Q ss_pred HHHHHhCCCEEEeCCeEEEEeCCe-------EEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHH-HhCcCCCcceEe
Q 007975 285 EEKFSRDGIDVKLGSMVVKVTDKE-------IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMK-QVGQTNRRALAT 356 (583)
Q Consensus 285 ~~~L~~~GV~v~~~~~V~~v~~~~-------v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~-~~~~~~~g~i~V 356 (583)
.+.+++.||+++++++|++++++. +++.+..+|+..++++|.||||+|.+++. .+++ .+.++.+|+|.|
T Consensus 202 ~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~---~~~~~~l~~~~~G~i~v 278 (333)
T 1vdc_A 202 QRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPAT---KFLDGGVELDSDGYVVT 278 (333)
T ss_dssp HHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESC---GGGTTSSCBCTTSCBCC
T ss_pred HHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccch---HHhhccccccCCCCEEe
Confidence 244577899999999999997532 66665335654569999999999976554 2333 223366899999
Q ss_pred CCCC-ccCCCCCEEEcCcccc
Q 007975 357 DEWL-RVEGSDSIYALGDCAT 376 (583)
Q Consensus 357 d~~l-~~~~~~~VyAiGD~a~ 376 (583)
|+++ ++ +.|+|||+|||+.
T Consensus 279 d~~~~~t-~~~~vya~GD~~~ 298 (333)
T 1vdc_A 279 KPGTTQT-SVPGVFAAGDVQD 298 (333)
T ss_dssp CTTSCBC-SSTTEEECGGGGC
T ss_pred chhhccc-CCCCEEEeeeccC
Confidence 9975 55 8999999999986
No 68
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=1.2e-32 Score=298.40 Aligned_cols=270 Identities=18% Similarity=0.326 Sum_probs=191.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCC------Cch----hh-----------------hcccc---
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT------PLL----PS-----------------VTCGT--- 106 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~------p~l----~~-----------------~~~g~--- 106 (583)
+.++|+|||||+||+++|..|++.|++|+|||+++..+.. ... |. ...|.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 3589999999999999999999999999999998632221 110 10 00000
Q ss_pred ---CCCcc-----------cchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccC
Q 007975 107 ---VEARS-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMG 172 (583)
Q Consensus 107 ---~~~~~-----------i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG 172 (583)
.+... +...+..++++.+ ++++.+++..++.....|...++ +...+.||+||+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~~~~~~~~v~~~~g--------~~~~~~~d~lvlAtG 151 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANG--VTLFEGHGKLLAGKKVEVTAADG--------SSQVLDTENVILASG 151 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHT--CEEEESEEEECSTTCEEEECTTS--------CEEEECCSCEEECCC
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEecCCEEEEEcCCC--------ceEEEEcCEEEEcCC
Confidence 00000 1111234455556 66788888888766555543222 124899999999999
Q ss_pred CCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhh
Q 007975 173 ARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFK 252 (583)
Q Consensus 173 ~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~ 252 (583)
+.|..++.++.+.. .+.+..++. .+. ..+++++|||+|++|+|+|..+.++
T Consensus 152 ~~p~~~~~~~~~~~--~v~~~~~~~-------------~~~-------~~~~~v~ViGgG~~g~e~A~~l~~~------- 202 (476)
T 3lad_A 152 SKPVEIPPAPVDQD--VIVDSTGAL-------------DFQ-------NVPGKLGVIGAGVIGLELGSVWARL------- 202 (476)
T ss_dssp EEECCCTTSCCCSS--SEEEHHHHT-------------SCS-------SCCSEEEEECCSHHHHHHHHHHHHT-------
T ss_pred CCCCCCCCCCCCcc--cEEechhhh-------------ccc-------cCCCeEEEECCCHHHHHHHHHHHHc-------
Confidence 99876655553321 111222211 111 2346999999999999999999876
Q ss_pred hcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcC-CCeeEEeecceEEE
Q 007975 253 LYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRG-NGETSSMPYGMVVW 329 (583)
Q Consensus 253 ~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~-~G~~~~i~~D~vI~ 329 (583)
+.+|+++++.+++++.+++++.+.+.+.|++.||+++++++|++++. +.+.+.... +| ..++++|.||+
T Consensus 203 -------g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g-~~~~~~D~vi~ 274 (476)
T 3lad_A 203 -------GAEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEG-EKSQAFDKLIV 274 (476)
T ss_dssp -------TCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSE-EEEEEESEEEE
T ss_pred -------CCcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCC-cEEEECCEEEE
Confidence 57999999999999999999999999999999999999999999973 344433221 23 23599999999
Q ss_pred ccCCCCchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 330 STGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 330 a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
|+|..+ ++..+ ++..++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 275 a~G~~p--~~~~l~~~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 321 (476)
T 3lad_A 275 AVGRRP--VTTDLLAADSGVTLDERGFIYVDDYCAT-SVPGVYAIGDVVR 321 (476)
T ss_dssp CSCEEE--CCTTCCSSCCSCCBCTTSCBCCCTTSBC-SSTTEEECGGGSS
T ss_pred eeCCcc--cCCCCCccccCccccCCCCEeeCCCccc-CCCCEEEEEccCC
Confidence 999654 44333 455565 66899999999998 8999999999984
No 69
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=1.3e-32 Score=298.71 Aligned_cols=260 Identities=23% Similarity=0.319 Sum_probs=192.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhc--------------------ccc------CCCc-
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT--------------------CGT------VEAR- 110 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~--------------------~g~------~~~~- 110 (583)
.++|+|||||++|+++|..|++.|++|+|||+. .+++......+. .|. .+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~-~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 104 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY-RIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEK 104 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC-CCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 579999999999999999999999999999994 444332111000 000 0000
Q ss_pred ----------ccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEe-cCCCCCCCCCceEEeecCEEEEccCCCCC-CC
Q 007975 111 ----------SIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCR-SSQNTNLNGKEEFCMDYDYLVIAMGARAN-TF 178 (583)
Q Consensus 111 ----------~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~i~yD~LViAtG~~~~-~~ 178 (583)
.+...+...+...+ ++++.+++..++. +.+.+. ++ ..+.||+||+|||+.|. .+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~g~~~~i~~--~~v~v~~~~----------~~~~~d~lviAtG~~p~~~p 170 (484)
T 3o0h_A 105 LVAAKNKEISRLEGLYREGLQNSN--VHIYESRAVFVDE--HTLELSVTG----------ERISAEKILIATGAKIVSNS 170 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT--CEEEESCEEEEET--TEEEETTTC----------CEEEEEEEEECCCEEECCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CEEEEeEEEEeeC--CEEEEecCC----------eEEEeCEEEEccCCCcccCC
Confidence 12223445556666 5677888888875 467664 22 28999999999999998 88
Q ss_pred CCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCC
Q 007975 179 NTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVK 258 (583)
Q Consensus 179 ~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~ 258 (583)
++||.+ ..+.. ++... + ...+++++|||+|++|+|+|..+.++
T Consensus 171 ~i~G~~-~~~~~---~~~~~-------------~-------~~~~~~v~ViGgG~~g~e~A~~l~~~------------- 213 (484)
T 3o0h_A 171 AIKGSD-LCLTS---NEIFD-------------L-------EKLPKSIVIVGGGYIGVEFANIFHGL------------- 213 (484)
T ss_dssp -CBTGG-GSBCT---TTGGG-------------C-------SSCCSEEEEECCSHHHHHHHHHHHHT-------------
T ss_pred CCCCcc-ccccH---HHHHh-------------H-------HhcCCcEEEECcCHHHHHHHHHHHHc-------------
Confidence 999874 22211 11110 0 02346999999999999999999875
Q ss_pred CCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCc
Q 007975 259 DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (583)
Q Consensus 259 ~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 336 (583)
+.+|+++++.+++++.+++.+.+.+.+.|++.||+++++++|++++. +.+.+.. .+|++ +++|.||+|+|..++
T Consensus 214 -g~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~-~~g~~--i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 214 -GVKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVL-TNGQT--ICADRVMLATGRVPN 289 (484)
T ss_dssp -TCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEE-TTSCE--EEESEEEECCCEEEC
T ss_pred -CCeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEE-CCCcE--EEcCEEEEeeCCCcC
Confidence 57999999999999999999999999999999999999999999974 3454443 45754 999999999996544
Q ss_pred hhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 337 AIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 337 p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+..+ ++..++ +.+|+|.||+++|+ +.|+|||+|||+.
T Consensus 290 --~~~l~l~~~g~~~~~~G~i~vd~~~~t-~~~~Iya~GD~~~ 329 (484)
T 3o0h_A 290 --TTGLGLERAGVKVNEFGAVVVDEKMTT-NVSHIWAVGDVTG 329 (484)
T ss_dssp --CTTCCHHHHTCCBCTTSCBCCCTTSBC-SSTTEEECGGGGT
T ss_pred --CCCCChhhcCceECCCCCEeECCCCCC-CCCCEEEEEecCC
Confidence 3222 556666 67899999999997 8999999999975
No 70
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=6.9e-32 Score=294.36 Aligned_cols=267 Identities=18% Similarity=0.206 Sum_probs=191.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC--------CCCCCCchhhhc---------------------ccc--
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN--------YFAFTPLLPSVT---------------------CGT-- 106 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~--------~~~~~p~l~~~~---------------------~g~-- 106 (583)
.+||+|||||+||+.||.++++.|.+|+|||+.. .++++++...+. .|.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 4799999999999999999999999999999754 234332111100 010
Q ss_pred ----CCCcc-----------cchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEcc
Q 007975 107 ----VEARS-----------IVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAM 171 (583)
Q Consensus 107 ----~~~~~-----------i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAt 171 (583)
.+... +...+...+++.+ ++++++....+++..-.|..... ..+.+.+.+|++||||
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~--V~~i~G~a~f~~~~~v~V~~~~~------~~~~~~i~a~~iiIAT 193 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSK--VKYINGLAKLKDKNTVSYYLKGD------LSKEETVTGKYILIAT 193 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECEEEEEEETTEEEEEEC--------CCCEEEEEEEEEEECC
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCC--CEEEeeeEEEcCCCcceEeeccc------CCceEEEeeeeEEecc
Confidence 00011 1112334456666 66789999888865433433321 1124589999999999
Q ss_pred CCCCCCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhH
Q 007975 172 GARANTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDL 250 (583)
Q Consensus 172 G~~~~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~ 250 (583)
|++|..|+.++.. +..+ +.+++. .++.+| ++++|||||++|+|+|..++++
T Consensus 194 Gs~P~~P~~~~~~~~~~~---ts~~~l-------------~l~~lP-------~~lvIIGgG~IGlE~A~~~~~l----- 245 (542)
T 4b1b_A 194 GCRPHIPDDVEGAKELSI---TSDDIF-------------SLKKDP-------GKTLVVGASYVALECSGFLNSL----- 245 (542)
T ss_dssp CEEECCCSSSBTHHHHCB---CHHHHT-------------TCSSCC-------CSEEEECCSHHHHHHHHHHHHH-----
T ss_pred CCCCCCCCcccCCCcccc---Cchhhh-------------ccccCC-------ceEEEECCCHHHHHHHHHHHhc-----
Confidence 9999888654433 2222 323221 222222 4999999999999999999998
Q ss_pred hhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEE
Q 007975 251 FKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVV 328 (583)
Q Consensus 251 ~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI 328 (583)
+.+||++++ +++|+.+++++++.+++.|++.||++++++.+.+++ ++.+.+.. .+++. +.+|.|+
T Consensus 246 ---------G~~VTii~~-~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~-~~~~~--~~~D~vL 312 (542)
T 4b1b_A 246 ---------GYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEF-SDKTS--ELYDTVL 312 (542)
T ss_dssp ---------TCCEEEEES-SCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEE-TTSCE--EEESEEE
T ss_pred ---------CCeEEEecc-cccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEE-cCCCe--EEEEEEE
Confidence 579999987 678999999999999999999999999999999986 35566554 34554 8899999
Q ss_pred EccCCCCchhHHHH-HHHhCc--CCCc-ceEeCCCCccCCCCCEEEcCcccc
Q 007975 329 WSTGIAPHAIIKDF-MKQVGQ--TNRR-ALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 329 ~a~G~~~~p~~~~l-~~~~~~--~~~g-~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+|+| ..|++..| ++.+++ +.++ .|.||+++|| +.|+|||+|||+.
T Consensus 313 vAvG--R~Pnt~~L~le~~gv~~~~~~~~i~vd~~~~T-s~p~IyAiGDv~~ 361 (542)
T 4b1b_A 313 YAIG--RKGDIDGLNLESLNMNVNKSNNKIIADHLSCT-NIPSIFAVGDVAE 361 (542)
T ss_dssp ECSC--EEESCGGGCGGGTTCCEETTTTEECCCTTSBC-SSTTEEECTTSBT
T ss_pred Eccc--ccCCccccCcccceeeecccCceEeccccccc-cCCCeEEeccccC
Confidence 9999 66777665 555665 4445 4688889998 8999999999974
No 71
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=6.1e-33 Score=301.59 Aligned_cols=265 Identities=17% Similarity=0.248 Sum_probs=188.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCch----hh------------------h--ccc--cCCCcc
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLL----PS------------------V--TCG--TVEARS 111 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l----~~------------------~--~~g--~~~~~~ 111 (583)
.++|+|||||+||++||..|++.|++|+|||+++ ++++++. |. + ..+ ..+..+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 4799999999999999999999999999999975 4443211 00 0 000 011111
Q ss_pred cchhHHHH-----------HHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCC
Q 007975 112 IVEPVRNI-----------VRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNT 180 (583)
Q Consensus 112 i~~~~~~~-----------~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~i 180 (583)
+...++.. +.... .+.++.+++..++ .++|.+.++ ..+.||+||||||++|..|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~g~a~~~~--~~~v~~~~~----------~~~~~d~lViATGs~p~~p~~ 153 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFD-EQDKIRGFAKFLD--EHTLQVDDH----------SQVIAKRIVIATGSRPNYPEF 153 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSC-GGGEEESCEEEEE--TTEEEETTT----------EEEEEEEEEECCCEECCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-CeeEEEEEEEEec--CCEEEEcCC----------cEEEeCEEEEccCCCCcCCCC
Confidence 22222111 12221 2235677776665 457776433 289999999999999988776
Q ss_pred CCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCC
Q 007975 181 PGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (583)
Q Consensus 181 pG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~ 260 (583)
++... ..+.+.++... +. ..+++++|||||++|+|+|..+.++ +
T Consensus 154 ~~~~~--~~v~t~~~~~~-------------~~-------~~~k~vvViGgG~ig~E~A~~l~~~--------------g 197 (492)
T 3ic9_A 154 LAAAG--SRLLTNDNLFE-------------LN-------DLPKSVAVFGPGVIGLELGQALSRL--------------G 197 (492)
T ss_dssp HHTTG--GGEECHHHHTT-------------CS-------SCCSEEEEESSCHHHHHHHHHHHHT--------------T
T ss_pred CCccC--CcEEcHHHHhh-------------hh-------hcCCeEEEECCCHHHHHHHHHHHHc--------------C
Confidence 65321 11223222211 11 2356999999999999999999886 5
Q ss_pred ceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEc-CCCeeEEeecceEEEccCCCCch
Q 007975 261 VKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVR-GNGETSSMPYGMVVWSTGIAPHA 337 (583)
Q Consensus 261 ~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~-~~G~~~~i~~D~vI~a~G~~~~p 337 (583)
.+|+++++.+++++.+++++.+.+.+.|++. |+++++++|++++. +.+.+... .+|+..++++|.||+|+|..++
T Consensus 198 ~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~- 275 (492)
T 3ic9_A 198 VIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN- 275 (492)
T ss_dssp CEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES-
T ss_pred CeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC-
Confidence 7999999999999999999999999999998 99999999999964 45555432 2574446999999999996554
Q ss_pred hHHHH-HHHhCc--CCCcceEeC-CCCccCCCCCEEEcCcccc
Q 007975 338 IIKDF-MKQVGQ--TNRRALATD-EWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 338 ~~~~l-~~~~~~--~~~g~i~Vd-~~l~~~~~~~VyAiGD~a~ 376 (583)
+..+ ++.+++ +.+|+|.|| +++|| +.|+|||+|||+.
T Consensus 276 -~~~l~l~~~gl~~~~~G~i~vd~~~~~t-~~~~IyA~GD~~~ 316 (492)
T 3ic9_A 276 -VDKLGLENTSIELDKKNSPLFDELTLQT-SVDHIFVAGDANN 316 (492)
T ss_dssp -CSSSCGGGSCCCBCTTCCBCCCTTTCBC-SSTTEEECGGGGT
T ss_pred -CCCCChhhcCCEECCCCCEeECcccccC-CCCCEEEEEecCC
Confidence 3222 456666 678999999 89998 8999999999975
No 72
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.9e-32 Score=282.74 Aligned_cols=262 Identities=16% Similarity=0.178 Sum_probs=181.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC------------chhhhcccc---------CCCcccchhH
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP------------LLPSVTCGT---------VEARSIVEPV 116 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p------------~l~~~~~g~---------~~~~~i~~~~ 116 (583)
+++|+|||||++|+++|..|++.|++|+|||+++.++... .......+. ....++...+
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 5799999999999999999999999999999997654221 000001111 0113455667
Q ss_pred HHHHHhCCCcEEEEEeEEEEEecCCCEEE-EecCCCCCCCCCceEEeecCEEEEccCC--CCCCCCCCCccccCc-ccCC
Q 007975 117 RNIVRKKNVDICFWEAECFKIDAENKKVY-CRSSQNTNLNGKEEFCMDYDYLVIAMGA--RANTFNTPGVEENCN-FLKE 192 (583)
Q Consensus 117 ~~~~~~~~i~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~i~yD~LViAtG~--~~~~~~ipG~~~~~~-~~~~ 192 (583)
.+++++.++++. ...+|+.++.+++.+. +.... + ++.||+||+|+|. .|..+.+||..+... .+..
T Consensus 83 ~~~~~~~~~~~~-~~~~v~~i~~~~~~~~~v~~~~-------g--~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~ 152 (357)
T 4a9w_A 83 AQYEQKYALPVL-RPIRVQRVSHFGERLRVVARDG-------R--QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHS 152 (357)
T ss_dssp HHHHHHTTCCEE-CSCCEEEEEEETTEEEEEETTS-------C--EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHcCCEEE-cCCEEEEEEECCCcEEEEEeCC-------C--EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEe
Confidence 777788887753 4679999999888766 55432 1 7999999999995 577788998754211 0000
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecC-Cc
Q 007975 193 VEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA-DH 271 (583)
Q Consensus 193 ~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~-~~ 271 (583)
.. . .......+++|+|||+|++|+|+|..|++. .+|+++++. +.
T Consensus 153 ~~-----------------~---~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~---------------~~v~~v~~~~~~ 197 (357)
T 4a9w_A 153 AH-----------------Y---STPAPFAGMRVAIIGGGNSGAQILAEVSTV---------------AETTWITQHEPA 197 (357)
T ss_dssp GG-----------------C---CCSGGGTTSEEEEECCSHHHHHHHHHHTTT---------------SEEEEECSSCCC
T ss_pred cc-----------------C---CChhhcCCCEEEEECCCcCHHHHHHHHHhh---------------CCEEEEECCCCe
Confidence 00 0 001123457999999999999999999765 269999988 56
Q ss_pred ccCcc--cHHHHHHHHHHHH----------------------------hCCCEEEeCCeEEEEeCCeEEEEEcCCCeeEE
Q 007975 272 ILNMF--DKRITAFAEEKFS----------------------------RDGIDVKLGSMVVKVTDKEIFTKVRGNGETSS 321 (583)
Q Consensus 272 il~~~--~~~~~~~~~~~L~----------------------------~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~ 321 (583)
++|.. +..+.+.+.+.+. +.|+ +..+..+.+++.+++++. +|++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~~v~~~---~g~~-- 271 (357)
T 4a9w_A 198 FLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPTGMQWA---DGTE-- 271 (357)
T ss_dssp BCCTTCCTHHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEETTEEECT---TSCE--
T ss_pred ecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeCCeeEEC---CCCE--
Confidence 66642 3444444333333 4555 666778888888887654 3765
Q ss_pred eecceEEEccCCCCchhHHHHHHHhCc-CCCcceEeCCC--CccCCCCCEEEcCcc
Q 007975 322 MPYGMVVWSTGIAPHAIIKDFMKQVGQ-TNRRALATDEW--LRVEGSDSIYALGDC 374 (583)
Q Consensus 322 i~~D~vI~a~G~~~~p~~~~l~~~~~~-~~~g~i~Vd~~--l~~~~~~~VyAiGD~ 374 (583)
+++|.||||+|+.++. .+++.+++ +.+|+|.||++ +++ +.|+|||+|||
T Consensus 272 i~~D~vi~a~G~~p~~---~~l~~~gl~~~~G~i~vd~~~l~~t-~~~~vya~Gd~ 323 (357)
T 4a9w_A 272 RAFDAVIWCTGFRPAL---SHLKGLDLVTPQGQVEVDGSGLRAL-AVPSVWLLGYG 323 (357)
T ss_dssp EECSEEEECCCBCCCC---GGGTTTTCBCTTSCBCBCTTSCBBS-SCTTEEECSSC
T ss_pred ecCCEEEECCCcCCCC---cccCcccccCCCCCccccCCcccCC-CCCCeEEeccc
Confidence 9999999999976652 35566777 67899999998 565 99999999965
No 73
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.98 E-value=4e-32 Score=302.43 Aligned_cols=270 Identities=17% Similarity=0.250 Sum_probs=189.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC-CC-------CCCCCc----hhhhc----------------ccc-
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR-NY-------FAFTPL----LPSVT----------------CGT- 106 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~-~~-------~~~~p~----l~~~~----------------~g~- 106 (583)
...++|+|||||+||++||..|++.|++|+|||+. +. ++++.+ .|... .|.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~ 184 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWS 184 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCcc
Confidence 34689999999999999999999999999999973 21 222111 11100 010
Q ss_pred -------CCCcccchhH-----------HHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEE
Q 007975 107 -------VEARSIVEPV-----------RNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLV 168 (583)
Q Consensus 107 -------~~~~~i~~~~-----------~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LV 168 (583)
.+...+...+ +..+...+ ++++.+.+..++.. .+.+.... ++..++.||+||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--V~~~~~~~~~~~~~--~v~v~~~~------g~~~~~~~d~lv 254 (598)
T 2x8g_A 185 LDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQ--VTYLNAKGRLISPH--EVQITDKN------QKVSTITGNKII 254 (598)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTT--CEEECSEEEEEETT--EEEEECTT------CCEEEEEEEEEE
T ss_pred ccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCC--cEEEEEEEEEcCCC--EEEEEeCC------CCeEEEEeCEEE
Confidence 0001111111 22244555 66788888888765 45443321 112379999999
Q ss_pred EccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhH
Q 007975 169 IAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDE 248 (583)
Q Consensus 169 iAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~ 248 (583)
||||++|+.|++||.+++.. +.+++ + .++ ...++++|||||++|+|+|..++++
T Consensus 255 iAtGs~p~~p~i~G~~~~~~---~~~~~----------~---~~~-------~~~~~vvViGgG~~g~E~A~~l~~~--- 308 (598)
T 2x8g_A 255 LATGERPKYPEIPGAVEYGI---TSDDL----------F---SLP-------YFPGKTLVIGASYVALECAGFLASL--- 308 (598)
T ss_dssp ECCCEEECCCSSTTHHHHCE---EHHHH----------T---TCS-------SCCCSEEEECCSHHHHHHHHHHHHT---
T ss_pred EeCCCCCCCCCCCCcccceE---cHHHH----------h---hCc-------cCCCEEEEECCCHHHHHHHHHHHHc---
Confidence 99999999999999754322 12211 1 111 2345899999999999999999886
Q ss_pred hHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEe--------C---CeEEEEE-cCC
Q 007975 249 DLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVT--------D---KEIFTKV-RGN 316 (583)
Q Consensus 249 ~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--------~---~~v~~~~-~~~ 316 (583)
+.+|+++++. .+++.+++.+.+.+.+.|++.||++++++.+++++ + +.+.+.. ..+
T Consensus 309 -----------g~~Vtlv~~~-~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~ 376 (598)
T 2x8g_A 309 -----------GGDVTVMVRS-ILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTD 376 (598)
T ss_dssp -----------TCCEEEEESS-CSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETT
T ss_pred -----------CCEEEEEECC-cCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCC
Confidence 5789999998 78888999999999999999999999999887773 2 3444331 235
Q ss_pred CeeEEeecceEEEccCCCCchhHHHH-HHHhCc--CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 317 GETSSMPYGMVVWSTGIAPHAIIKDF-MKQVGQ--TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 317 G~~~~i~~D~vI~a~G~~~~p~~~~l-~~~~~~--~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
|++.++++|.||||+|.++ ++..+ ++.+++ +.+|+|.||+++|| +.|+|||+|||+.
T Consensus 377 g~~~~~~~D~vi~a~G~~p--~~~~l~~~~~gl~~~~~G~i~vd~~~~t-s~~~VyA~GD~~~ 436 (598)
T 2x8g_A 377 GKKFEEEFETVIFAVGREP--QLSKVLCETVGVKLDKNGRVVCTDDEQT-TVSNVYAIGDINA 436 (598)
T ss_dssp SCEEEEEESEEEECSCEEE--CGGGTBCGGGCCCBCTTSCBCCCTTSBC-SSTTEEECGGGBT
T ss_pred CcEEeccCCEEEEEeCCcc--ccCccCchhcCceECCCCcEEeCCCCcC-CCCCEEEEeeecC
Confidence 7654566999999999654 44223 355665 67799999999998 8999999999964
No 74
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.98 E-value=3.6e-32 Score=277.12 Aligned_cols=262 Identities=13% Similarity=0.153 Sum_probs=171.5
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCC-Cchhhhcc-ccCCCcccchhHHHHHHhCCCcEEEEEe
Q 007975 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT-PLLPSVTC-GTVEARSIVEPVRNIVRKKNVDICFWEA 132 (583)
Q Consensus 55 ~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~-p~l~~~~~-g~~~~~~i~~~~~~~~~~~~i~v~~~~~ 132 (583)
.|+.+||+||||||||++||.+|++.|++|+|||++..-+.. ...+.+.. ....+.++.....+.+.+++ .+.+...
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 81 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKYP-SVHYYEK 81 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTST-TEEEEEC
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhcC-CEEEEee
Confidence 466789999999999999999999999999999987432110 00111110 11122233344444444444 3567777
Q ss_pred EEEEEecCCC---EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccC-cccCCHHHHHHHHHHHHHHHH
Q 007975 133 ECFKIDAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENC-NFLKEVEDAQRIRRNVIESFE 208 (583)
Q Consensus 133 ~v~~id~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~-~~~~~~~~a~~l~~~l~~~~~ 208 (583)
++..++.... ++.+.++. ++.||+||||||++|+.|++||.++.. ..+...... +
T Consensus 82 ~~~~~~~~~~~~~~v~~~~g~----------~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~~~--------~--- 140 (304)
T 4fk1_A 82 TVVMITKQSTGLFEIVTKDHT----------KYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCPYC--------D--- 140 (304)
T ss_dssp CEEEEEECTTSCEEEEETTCC----------EEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCHHH--------H---
T ss_pred EEEEeeecCCCcEEEEECCCC----------EEEeCEEEEccCCccccccccCccccccceeeecccc--------c---
Confidence 7777765432 44444332 899999999999999999999975321 111111100 0
Q ss_pred HcCCCCCCHHHHhccceEEEEcCChh-HHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHH
Q 007975 209 KASLPNLSDEERKRILHFVIVGGGPT-GVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEK 287 (583)
Q Consensus 209 ~~~~~~~~~~~~~~~~~vvVVGgG~t-gvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~ 287 (583)
....+.++++|||||.. ++|+|..+..+ +.+|+++++.+.+. +.+.+.
T Consensus 141 ---------~~~~~~~~~~VIggG~~~~~e~a~~~~~~--------------~~~v~i~~~~~~~~--------~~~~~~ 189 (304)
T 4fk1_A 141 ---------GWELKDQPLIIISENEDHTLHMTKLVYNW--------------STDLVIATNGNELS--------QTIMDE 189 (304)
T ss_dssp ---------SGGGTTSCEEEECCSHHHHHHHHHHHTTT--------------CSCEEEECSSCCCC--------HHHHHH
T ss_pred ---------hhHhcCCceeeecCCCchhhhHHHHHHhC--------------CceEEEEeccccch--------hhhhhh
Confidence 00123457888888876 46666665543 57899998876553 234577
Q ss_pred HHhCCCEEEeCCeEEEEeCC--eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc--CCCcceEeCCCCccC
Q 007975 288 FSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVE 363 (583)
Q Consensus 288 L~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~ 363 (583)
|++.|++++.++ ++++..+ .++.....+|++ +++|.+|+++|..++ + .+++++++ +++|+|.||+++||
T Consensus 190 l~~~g~~~~~~~-v~~~~~~~~~~~~v~~~~g~~--i~~~~~vi~~g~~~~-~--~~~~~~g~~~~~~G~I~vd~~~~T- 262 (304)
T 4fk1_A 190 LSNKNIPVITES-IRTLQGEGGYLKKVEFHSGLR--IERAGGFIVPTFFRP-N--QFIEQLGCELQSNGTFVIDDFGRT- 262 (304)
T ss_dssp HHTTTCCEECSC-EEEEESGGGCCCEEEETTSCE--ECCCEEEECCEEECS-S--CHHHHTTCCCCTTSSSCSSTTCBC-
T ss_pred hhccceeEeeee-EEEeecCCCeeeeeeccccce--eeecceeeeeccccC-C--hhhhhcCeEECCCCCEEECcCCcc-
Confidence 889999999864 7777643 333233355775 889888888774433 2 35667776 67899999999998
Q ss_pred CCCCEEEcCcccc
Q 007975 364 GSDSIYALGDCAT 376 (583)
Q Consensus 364 ~~~~VyAiGD~a~ 376 (583)
+.|+|||+|||+.
T Consensus 263 s~p~IyA~GDv~~ 275 (304)
T 4fk1_A 263 SEKNIYLAGETTT 275 (304)
T ss_dssp SSTTEEECSHHHH
T ss_pred CCCCEEEEeccCC
Confidence 8999999999985
No 75
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.98 E-value=5.5e-32 Score=290.38 Aligned_cols=276 Identities=16% Similarity=0.161 Sum_probs=182.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEE
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~ 135 (583)
.+.++|+|||||+||+++|..|++.|++|+|||+++.+++. +....++...+.++.....+++.+.+++ +..+...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~--l~~gip~~~~~~~~~~~~~~~l~~~gv~--~~~~~~v 195 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGL--LVYGIPGFKLEKSVVERRVKLLADAGVI--YHPNFEV 195 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTH--HHHTSCTTTSCHHHHHHHHHHHHHTTCE--EETTCCB
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCe--eeecCCCccCCHHHHHHHHHHHHHCCcE--EEeCCEe
Confidence 45689999999999999999999999999999999876542 2211222222345666677788888844 4433321
Q ss_pred EEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCC-CCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCC
Q 007975 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGAR-ANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPN 214 (583)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~-~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 214 (583)
. +.+.+++. .+.||+||+|||+. |+.+++||.+.. .+.+..+...-.+. ..+... .+.
T Consensus 196 ~-----~~v~~~~~-----------~~~~d~vvlAtG~~~~~~~~ipG~~~~--gv~~a~~~l~~~~~--~~~~~~-~~~ 254 (456)
T 2vdc_G 196 G-----RDASLPEL-----------RRKHVAVLVATGVYKARDIKAPGSGLG--NIVAALDYLTTSNK--VSLGDT-VEA 254 (456)
T ss_dssp T-----TTBCHHHH-----------HSSCSEEEECCCCCEECCTTCSCCTTT--TEEEHHHHHHHHHH--HHCTTT-CSS
T ss_pred c-----cEEEhhHh-----------HhhCCEEEEecCCCCCCCCCCCCCcCC--CcEEHHHHHHHhhh--hhcccc-ccc
Confidence 1 12222211 36799999999997 778889986421 11222222111111 001100 000
Q ss_pred CCH-HHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc-cCcccHHHHHHHHHHHHhCC
Q 007975 215 LSD-EERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI-LNMFDKRITAFAEEKFSRDG 292 (583)
Q Consensus 215 ~~~-~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i-l~~~~~~~~~~~~~~L~~~G 292 (583)
... .....+++|+|||||++|+|+|..+.+.. ..+|+++++.+.. +|..+.+ .+.+++.|
T Consensus 255 ~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~G-------------a~~Vtiv~r~~~~~~p~~~~e-----~~~~~~~G 316 (456)
T 2vdc_G 255 YENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQG-------------ATSVKCLYRRDRKNMPGSQRE-----VAHAEEEG 316 (456)
T ss_dssp CCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTT-------------CSEEEEECSSCSTTCSSCHHH-----HHHHHHTT
T ss_pred ccccccccCCCEEEEECCChhHHHHHHHHHHcC-------------CCEEEEEEeCCccCCCCCHHH-----HHHHHHCC
Confidence 000 01135789999999999999999887752 1369999999876 7766544 25678889
Q ss_pred CEEEeCCeEEEEeCCe----EEEEEc------C---------CCeeEEeecceEEEccCCCCchhHHHHHHHhCc--CCC
Q 007975 293 IDVKLGSMVVKVTDKE----IFTKVR------G---------NGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNR 351 (583)
Q Consensus 293 V~v~~~~~V~~v~~~~----v~~~~~------~---------~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~ 351 (583)
|++++++.++++.+++ +++... . +|+..++++|+||+|+|..+++.. .+++.+++ +.+
T Consensus 317 v~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~-~~l~~~gl~~~~~ 395 (456)
T 2vdc_G 317 VEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLP-NAFDEPELKVTRW 395 (456)
T ss_dssp CEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHH-HHHHSTTSCBCTT
T ss_pred CEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcch-hhcccCCeeECCC
Confidence 9999999998886542 233210 1 254457999999999997554321 25566665 678
Q ss_pred cceEeCCC-CccCCCCCEEEcCcccc
Q 007975 352 RALATDEW-LRVEGSDSIYALGDCAT 376 (583)
Q Consensus 352 g~i~Vd~~-l~~~~~~~VyAiGD~a~ 376 (583)
|+|.||++ ++| +.|+|||+|||+.
T Consensus 396 G~i~vd~~~~~T-s~~~VfA~GD~~~ 420 (456)
T 2vdc_G 396 GTLLVDHRTKMT-NMDGVFAAGDIVR 420 (456)
T ss_dssp SSBCCCTTTCBC-SSTTEEECGGGGS
T ss_pred CCEEECCCCCcC-CCCCEEEeccccC
Confidence 99999997 997 8999999999975
No 76
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.98 E-value=3.9e-31 Score=289.20 Aligned_cols=264 Identities=20% Similarity=0.315 Sum_probs=188.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc----hhhhcc-ccCCCcccchhHHHHHHhCCCcEEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----LPSVTC-GTVEARSIVEPVRNIVRKKNVDICFWE 131 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~----l~~~~~-g~~~~~~i~~~~~~~~~~~~i~v~~~~ 131 (583)
..++|+|||||+||+++|..|++.|++|+|||++ +++... ...+.. ......++...+...+++.+ ++++.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~--~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g--v~v~~ 286 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGER--FGGQVLDTVDIENYISVPKTEGQKLAGALKAHVSDYD--VDVID 286 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS--TTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHHTSC--EEEEC
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECC--CCCcccccccccccCCCCCCCHHHHHHHHHHHHHHcC--CEEEc
Confidence 4679999999999999999999999999999974 222111 111100 01122345566777777787 55555
Q ss_pred e-EEEEEecC-----CCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHH
Q 007975 132 A-ECFKIDAE-----NKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIE 205 (583)
Q Consensus 132 ~-~v~~id~~-----~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~ 205 (583)
+ +|+.++++ ...|.+.++. .+.||+||+|||+.|..+++||..++.. +.+..
T Consensus 287 ~~~v~~i~~~~~~~~~~~V~~~~g~----------~~~~d~vVlAtG~~~~~~~ipG~~~~~~--~~v~~---------- 344 (521)
T 1hyu_A 287 SQSASKLVPAATEGGLHQIETASGA----------VLKARSIIIATGAKWRNMNVPGEDQYRT--KGVTY---------- 344 (521)
T ss_dssp SCCEEEEECCSSTTSCEEEEETTSC----------EEEEEEEEECCCEEECCCCCTTTTTTTT--TTEEC----------
T ss_pred CCEEEEEEeccCCCceEEEEECCCC----------EEEcCEEEECCCCCcCCCCCCChhhhcC--ceEEE----------
Confidence 5 89999864 2355554432 7999999999999998889999754210 00000
Q ss_pred HHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHH
Q 007975 206 SFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAE 285 (583)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~ 285 (583)
.+.. ......+++|+|||||++|+|+|..|+.. +.+|+++++.+++++. +.+.
T Consensus 345 ------~~~~-~~~~~~~k~V~ViGgG~~g~E~A~~L~~~--------------g~~Vtlv~~~~~l~~~------~~l~ 397 (521)
T 1hyu_A 345 ------CPHC-DGPLFKGKRVAVIGGGNSGVEAAIDLAGI--------------VEHVTLLEFAPEMKAD------QVLQ 397 (521)
T ss_dssp ------CTTC-CGGGGBTSEEEEECCSHHHHHHHHHHHHH--------------BSEEEEECSSSSCCSC------HHHH
T ss_pred ------eecC-chhhcCCCeEEEECCCHHHHHHHHHHHhh--------------CCEEEEEEeCcccCcC------HHHH
Confidence 0000 01123567999999999999999999876 4699999999887642 3456
Q ss_pred HHHHh-CCCEEEeCCeEEEEeCC-----eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHH-hCcCCCcceEeCC
Q 007975 286 EKFSR-DGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQTNRRALATDE 358 (583)
Q Consensus 286 ~~L~~-~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~-~~~~~~g~i~Vd~ 358 (583)
+.|++ .||+++++++|++++++ ++++.+..+|+..++++|.|||++|..++ + .++.. +.++.+|+|.||+
T Consensus 398 ~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn--~-~~l~~~l~~~~~G~I~Vd~ 474 (521)
T 1hyu_A 398 DKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPN--T-HWLEGALERNRMGEIIIDA 474 (521)
T ss_dssp HHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEES--C-GGGTTTSCBCTTSCBCCCT
T ss_pred HHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCC--c-hHHhhhhccCCCCcEEeCC
Confidence 67777 69999999999999753 35565544576557999999999996544 3 33332 3346789999999
Q ss_pred CCccCCCCCEEEcCccccc
Q 007975 359 WLRVEGSDSIYALGDCATV 377 (583)
Q Consensus 359 ~l~~~~~~~VyAiGD~a~~ 377 (583)
++|| +.|+|||+|||+..
T Consensus 475 ~~~t-s~p~VfA~GD~~~~ 492 (521)
T 1hyu_A 475 KCET-SVKGVFAAGDCTTV 492 (521)
T ss_dssp TCBC-SSTTEEECSTTBCC
T ss_pred CCCC-CCCCEEEeecccCC
Confidence 9998 89999999999864
No 77
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.98 E-value=1.6e-31 Score=279.38 Aligned_cols=267 Identities=16% Similarity=0.227 Sum_probs=179.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCCCCCC------------CCchhhhcccc-----------------
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAF------------TPLLPSVTCGT----------------- 106 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~~~~~------------~p~l~~~~~g~----------------- 106 (583)
+.++|+|||||++|+++|..|++.|+ +|+|||+++ .+. .+.......+.
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhcccccccccccc
Confidence 35799999999999999999998899 999999986 211 11111000111
Q ss_pred ---CCCcccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCc
Q 007975 107 ---VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGV 183 (583)
Q Consensus 107 ---~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~ 183 (583)
.....+...+..++++.++++. ...+|+.++.+++.+.+.... + ++.||+||+|+|+.+. +.+|+
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i~-~~~~v~~i~~~~~~~~v~~~~-------g--~~~~d~vVlAtG~~~~-p~ip~- 149 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNIF-ENTVVTNISADDAYYTIATTT-------E--TYHADYIFVATGDYNF-PKKPF- 149 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEEE-CSCCEEEEEECSSSEEEEESS-------C--CEEEEEEEECCCSTTS-BCCCS-
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeEE-eCCEEEEEEECCCeEEEEeCC-------C--EEEeCEEEECCCCCCc-cCCCC-
Confidence 1112234445666777775542 356799998875433333221 1 5889999999999865 56676
Q ss_pred cccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceE
Q 007975 184 EENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKI 263 (583)
Q Consensus 184 ~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~V 263 (583)
+......... .....+.++|+|||+|++|+|+|..|.+. +.+|
T Consensus 150 -~~~~~~~~~~----------------------~~~~~~~~~vvVvG~G~~g~e~a~~l~~~--------------g~~V 192 (369)
T 3d1c_A 150 -KYGIHYSEIE----------------------DFDNFNKGQYVVIGGNESGFDAAYQLAKN--------------GSDI 192 (369)
T ss_dssp -SSCEEGGGCS----------------------CGGGSCSSEEEEECCSHHHHHHHHHHHHT--------------TCEE
T ss_pred -CceechhhcC----------------------ChhhcCCCEEEEECCCcCHHHHHHHHHhc--------------CCeE
Confidence 2222111100 00112456999999999999999999875 4799
Q ss_pred EEEecCCcccCc-------ccHHHHHHHHHHHHhCC-CEEEeCCeEEEE--eCCeEEEEEcCCCeeEEeecceEEEccCC
Q 007975 264 TLLEAADHILNM-------FDKRITAFAEEKFSRDG-IDVKLGSMVVKV--TDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (583)
Q Consensus 264 tlv~~~~~il~~-------~~~~~~~~~~~~L~~~G-V~v~~~~~V~~v--~~~~v~~~~~~~G~~~~i~~D~vI~a~G~ 333 (583)
+++++.+.+++. +++.+.+.+.+.|++.| |+++++++|+++ +++.+.+.. .+|+. ...+|.||||+|+
T Consensus 193 ~lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~-~~g~~-~~~~d~vi~a~G~ 270 (369)
T 3d1c_A 193 ALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISF-DSGQS-VHTPHEPILATGF 270 (369)
T ss_dssp EEECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEE-SSSCC-EEESSCCEECCCB
T ss_pred EEEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEe-cCCeE-eccCCceEEeecc
Confidence 999999988742 56778889999999997 999999999999 455554443 45764 2346999999996
Q ss_pred CCchhHHHHHHHhCc-CCCcceEeCCCCccCCCCCEEEcCcccccc
Q 007975 334 APHAIIKDFMKQVGQ-TNRRALATDEWLRVEGSDSIYALGDCATVN 378 (583)
Q Consensus 334 ~~~p~~~~l~~~~~~-~~~g~i~Vd~~l~~~~~~~VyAiGD~a~~~ 378 (583)
.++. . ++.+.++ +.+|++.||++++.+++|+|||+|||+..+
T Consensus 271 ~~~~--~-~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~ 313 (369)
T 3d1c_A 271 DATK--N-PIVQQLFVTTNQDIKLTTHDESTRYPNIFMIGATVEND 313 (369)
T ss_dssp CGGG--S-HHHHHHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCS
T ss_pred CCcc--c-hhhhhhccCCCCCEEechhhcccCCCCeEEeccccccC
Confidence 6554 1 2223334 677889999976656899999999998753
No 78
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=2.2e-31 Score=300.66 Aligned_cols=290 Identities=14% Similarity=0.078 Sum_probs=206.9
Q ss_pred CCchhHHHHHHHhhccceeeeecccCCCCCcCCC-----CCCCCCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 17 YSSLSKLIVISTVGGGSLIAYSEANASSDAYSVA-----PPEMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+||.+|..|...... .....|..||....+... ...+...+++|||||||+||++||+.|++.|++|+|||+++
T Consensus 346 ~~c~~c~~C~~~~~~-~~~~~C~vnp~~g~e~~~~~~~~~~~~~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~ 424 (690)
T 3k30_A 346 RECIGCNICVSGDLT-MSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGR 424 (690)
T ss_dssp CCCCCCCHHHHHHHT-TSCCCCSSCTTTTTTTTTCCCSSCCCCCSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred ccccchhhhhhcccC-CCcccCCcCcccCcccccccCccccCcccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 578877766654332 234468888887655321 22344567899999999999999999999999999999999
Q ss_pred CCCCCCchhhhccccCCCcccchhHHHHHHhC-CCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEc
Q 007975 92 YFAFTPLLPSVTCGTVEARSIVEPVRNIVRKK-NVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIA 170 (583)
Q Consensus 92 ~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~-~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViA 170 (583)
.++++.......++..+..++...+...+.+. + +++..++ .+...+. .++.||+||+|
T Consensus 425 ~~GG~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g--v~~~~~~---------~v~~~~~----------~~~~~d~lvlA 483 (690)
T 3k30_A 425 DLGGRVTQESALPGLSAWGRVKEYREAVLAELPN--VEIYRES---------PMTGDDI----------VEFGFEHVITA 483 (690)
T ss_dssp SSCTHHHHHHTSTTCGGGGHHHHHHHHHHHTCTT--EEEESSC---------CCCHHHH----------HHTTCCEEEEC
T ss_pred CCCCEeeeccCCCchhHHHHHHHHHHHHHHHcCC--CEEEECC---------eecHHHH----------hhcCCCEEEEc
Confidence 88876655555566655666677777777776 5 4433221 1222111 26789999999
Q ss_pred cCCCC--------CCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEc--CChhHHHHHH
Q 007975 171 MGARA--------NTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVG--GGPTGVEFAA 240 (583)
Q Consensus 171 tG~~~--------~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVG--gG~tgvE~A~ 240 (583)
||+.| ..+++||.+.. .+.+..+... . . ...+++|+||| +|++|+|+|.
T Consensus 484 tG~~~~~~~~~~~~~~~i~G~~~~--~v~~~~~~l~----------~-~--------~~~g~~VvViG~ggG~~g~e~A~ 542 (690)
T 3k30_A 484 TGATWRTDGVARFHTTALPIAEGM--QVLGPDDLFA----------G-R--------LPDGKKVVVYDDDHYYLGGVVAE 542 (690)
T ss_dssp CCEEECSSCCSSSCSSCCCBCTTS--EEECHHHHHT----------T-C--------CCSSSEEEEEECSCSSHHHHHHH
T ss_pred CCCccccccccccCCCCCCCCCCC--cEEcHHHHhC----------C-C--------CCCCCEEEEEcCCCCccHHHHHH
Confidence 99984 46778886531 1223322211 0 0 13456899999 9999999999
Q ss_pred HHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCccc-HHHHHHHHHHHHhCCCEEEeCCeEEEEeCCeEEEEEcCCCee
Q 007975 241 ELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFD-KRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGET 319 (583)
Q Consensus 241 ~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~-~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~ 319 (583)
.|.+. +.+|+++++.+.+++... +.....+.+.|+++||+++++++|++++++++.+....+++.
T Consensus 543 ~L~~~--------------g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~ 608 (690)
T 3k30_A 543 LLAQK--------------GYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIE 608 (690)
T ss_dssp HHHHT--------------TCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCE
T ss_pred HHHhC--------------CCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeE
Confidence 99876 579999999999887643 556788889999999999999999999999888775434444
Q ss_pred EEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 320 SSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 320 ~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
.++++|.||||+|..++. .+...++. .+. ++ +.|+|||+|||+.
T Consensus 609 ~~i~aD~VV~A~G~~p~~---~l~~~l~~--~~~-------~t-~~~~VyaiGD~~~ 652 (690)
T 3k30_A 609 RELECDAVVMVTARLPRE---ELYLDLVA--RRD-------AG-EIASVRGIGDAWA 652 (690)
T ss_dssp EEEECSEEEEESCEEECC---HHHHHHHH--HHH-------HT-SCSEEEECGGGTS
T ss_pred EEEECCEEEECCCCCCCh---HHHHHHhh--hhc-------cc-CCCCEEEEeCCCc
Confidence 469999999999976554 34433321 111 44 7999999999975
No 79
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.97 E-value=5.6e-31 Score=298.68 Aligned_cols=300 Identities=15% Similarity=0.117 Sum_probs=194.0
Q ss_pred CCCchhHHHHHHH-hhccceeeeecccCCCCCcCC-----CCCCCCCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcC
Q 007975 16 DYSSLSKLIVIST-VGGGSLIAYSEANASSDAYSV-----APPEMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISP 89 (583)
Q Consensus 16 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~ 89 (583)
.+||..|..|... ... .....|..+|....+.. ....+..++++|||||||+||++||..|++.|++|+|||+
T Consensus 342 ~~~ci~Cn~C~~~~~~~-~~~~~C~~n~~~g~e~~~~~~~~~~~~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~ 420 (729)
T 1o94_A 342 IRVCIGCNVCISRWEIG-GPPMICTQNATAGEEYRRGWHPEKFRQTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDT 420 (729)
T ss_dssp CCCCCCCCHHHHHHHHS-SSCCCCSSCTTTTTHHHHCCCTTCCCCCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred cccccccchhccccccc-CCceeeccCccccccccccccccccccccCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeC
Confidence 4677776655543 222 22345777777654321 1223345678999999999999999999999999999999
Q ss_pred CCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEE
Q 007975 90 RNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVI 169 (583)
Q Consensus 90 ~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LVi 169 (583)
++.+++........++..+...+...+...+.... . ....++.++. ++.+.++++ ..+.||+|||
T Consensus 421 ~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~-~---~~~~~v~i~~-~~~v~~~~~----------~~~~~d~vvi 485 (729)
T 1o94_A 421 AEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLL-K---KNKESQLALG-QKPMTADDV----------LQYGADKVII 485 (729)
T ss_dssp SSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHH-H---HSTTCEEECS-CCCCCHHHH----------HTSCCSEEEE
T ss_pred CCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhh-c---ccCCceEEEe-CeEEehhhc----------cccCCCEEEE
Confidence 98876653332222332221222222222222210 0 0000112222 223333322 1578999999
Q ss_pred ccCCC--------CCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEc--CChhHHHHH
Q 007975 170 AMGAR--------ANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVG--GGPTGVEFA 239 (583)
Q Consensus 170 AtG~~--------~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVG--gG~tgvE~A 239 (583)
|||+. |..+++||.+++...+.+..++.. . . ...+++|+||| ||++|+|+|
T Consensus 486 AtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l~----------~-~--------~~~gk~VvVIG~GgG~~g~e~A 546 (729)
T 1o94_A 486 ATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVMD----------G-K--------KKIGKRVVILNADTYFMAPSLA 546 (729)
T ss_dssp CCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHHH----------C-C--------SCCCSEEEEEECCCSSHHHHHH
T ss_pred cCCCCcccccccCccCCCCCCccccCCCEEEHHHHhc----------C-C--------CCCCCeEEEEcCCCCchHHHHH
Confidence 99998 456788997633222334433311 0 0 12467999999 999999999
Q ss_pred HHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc--ccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCCeEEEEEcC-C
Q 007975 240 AELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM--FDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRG-N 316 (583)
Q Consensus 240 ~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~--~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~-~ 316 (583)
..|.++ +.+|+++++.+ +++. ++.. ...+.+.|+++||+++++++|++|+++++++.... +
T Consensus 547 ~~l~~~--------------G~~Vtlv~~~~-l~~~~~~~~~-~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~ 610 (729)
T 1o94_A 547 EKLATA--------------GHEVTIVSGVH-LANYMHFTLE-YPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGD 610 (729)
T ss_dssp HHHHHT--------------TCEEEEEESSC-TTHHHHHTTC-HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCS
T ss_pred HHHHHc--------------CCEEEEEeccc-cccccccccc-HHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCC
Confidence 999886 57999999998 6652 3323 46778889999999999999999998887765321 2
Q ss_pred C-----------------eeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 317 G-----------------ETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 317 G-----------------~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+ ++.++++|.||||+|..++. .+++.++. .||++++| +.|+|||+|||+.
T Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~---~l~~~l~~------~vd~~~~t-~~~~VyAiGD~~~ 677 (729)
T 1o94_A 611 GSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC---TLWNELKA------RESEWAEN-DIKGIYLIGDAEA 677 (729)
T ss_dssp CSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC---HHHHHHHH------TGGGTGGG-TCCEEEECGGGTS
T ss_pred ceEEecccccccccccCCcceeeeCCEEEECCCCCCCh---HHHHHHhh------hccccccc-CCCCeEEEeCccc
Confidence 2 12248999999999965543 34444321 36889998 8999999999974
No 80
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=1e-30 Score=280.77 Aligned_cols=286 Identities=14% Similarity=0.128 Sum_probs=190.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC-C------CCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNN-P------SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICF 129 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~-~------g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~ 129 (583)
.+++|+|||||+||+++|..|++ . +++|+|||+.+++++. +.+.+.++.....++...+..++.+.+ ++|
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~-~~~gv~p~~~~~~~~~~~~~~~~~~~~--v~~ 78 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGL-VRSGVAPDHPKIKSISKQFEKTAEDPR--FRF 78 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTH-HHHTSCTTCTGGGGGHHHHHHHHTSTT--EEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCc-cccccCCCCCCHHHHHHHHHHHHhcCC--CEE
Confidence 45799999999999999999988 6 9999999999875433 234444444455567777888887776 555
Q ss_pred EEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCC-CCCCCCCCccccCcccCCHHHHHHHHHHHHHHHH
Q 007975 130 WEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGAR-ANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFE 208 (583)
Q Consensus 130 ~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~-~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~ 208 (583)
+.+ +. + .+.|.++++ .+.||+||+|||+. ++.+++||.+ ...+.+..+.....+...++.
T Consensus 79 ~~~-v~-v---~~~v~~~~~-----------~~~~d~lViAtG~~~~~~~~ipG~~--~~gv~~~~~~~~~~~~~~d~~- 139 (456)
T 1lqt_A 79 FGN-VV-V---GEHVQPGEL-----------SERYDAVIYAVGAQSDRMLNIPGED--LPGSIAAVDFVGWYNAHPHFE- 139 (456)
T ss_dssp EES-CC-B---TTTBCHHHH-----------HHHSSEEEECCCCCEECCCCCTTTT--STTEEEHHHHHHHHTTCGGGT-
T ss_pred Eee-EE-E---CCEEEECCC-----------eEeCCEEEEeeCCCCCCCCCCCCCC--CCCcEEHHHHHhhhhcCcccc-
Confidence 544 21 2 233443321 57899999999997 7888999975 112223333322211111100
Q ss_pred HcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcC-----CCC-CC-ceEEEEecCCcccCcccH---
Q 007975 209 KASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYP-----KVK-DS-VKITLLEAADHILNMFDK--- 278 (583)
Q Consensus 209 ~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p-----~~~-~~-~~Vtlv~~~~~il~~~~~--- 278 (583)
..+. ...+++|+|||+|++|+|+|..|+....+.....++ .++ .+ .+|+++++.+.++..|.+
T Consensus 140 -~~~~------~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~el 212 (456)
T 1lqt_A 140 -QVSP------DLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLEL 212 (456)
T ss_dssp -TCCC------CCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHH
T ss_pred -cchh------hcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHH
Confidence 0111 014679999999999999999998753211111110 001 13 499999998876544321
Q ss_pred ----------------H------------------HHHHHHHHHHh------CCCEEEeCCeEEEEeCC----eEEEEEc
Q 007975 279 ----------------R------------------ITAFAEEKFSR------DGIDVKLGSMVVKVTDK----EIFTKVR 314 (583)
Q Consensus 279 ----------------~------------------~~~~~~~~L~~------~GV~v~~~~~V~~v~~~----~v~~~~~ 314 (583)
+ +.+.+.+.+++ +||++++++.+++|.++ ++++...
T Consensus 213 rel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~ 292 (456)
T 1lqt_A 213 RELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRN 292 (456)
T ss_dssp HHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEE
T ss_pred HHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEE
Confidence 1 12344455555 79999999999999764 2555421
Q ss_pred -------------CCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 315 -------------GNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 315 -------------~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
.+|+..+++||+||||+|+++++. ..+.++.+|+|.||+++|+++.|+|||+|||+.
T Consensus 293 ~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~l-----~gl~~d~~g~i~vn~~~rvt~~pgvya~GD~~~ 362 (456)
T 1lqt_A 293 ELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPT-----PGLPFDDQSGTIPNVGGRINGSPNEYVVGWIKR 362 (456)
T ss_dssp EEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCCC-----TTSCCBTTTTBCCEETTEETTCSSEEECTHHHH
T ss_pred EecCCCcccccccCCCceEEEEcCEEEEccccccCCC-----CCCcccCCCCeeECCCCcCCCCCCEEEEeccCC
Confidence 135545699999999999877762 234457788999999999668999999999975
No 81
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.97 E-value=1.4e-29 Score=273.14 Aligned_cols=283 Identities=14% Similarity=0.169 Sum_probs=181.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC-----CeEEEEcCCCCCCCCCchh--hhcc-------------------------
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPS-----YDVQVISPRNYFAFTPLLP--SVTC------------------------- 104 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g-----~~Vtlie~~~~~~~~p~l~--~~~~------------------------- 104 (583)
.+++|||||||++|+++|..|++.| ++|+|||+++.++|.+... ....
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 3469999999999999999999888 9999999999877654211 0000
Q ss_pred --c---------c--CCCcccchhHHHHHHhCCCcEEEEEeEEEEEecC---CC----EEEEecCCCCCCCCCceEEeec
Q 007975 105 --G---------T--VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAE---NK----KVYCRSSQNTNLNGKEEFCMDY 164 (583)
Q Consensus 105 --g---------~--~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~---~~----~v~~~~~~~~~~~~~~~~~i~y 164 (583)
+ . ....++...++.+.++.+++++ ...+|+.|+.+ .+ .|.+.++. ++.+++.|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~-~~~~V~~i~~~~~~~~~~~~~V~~~~g~------g~~~~~~~ 181 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSR-YGEEVLRIEPMLSAGQVEALRVISRNAD------GEELVRTT 181 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEE-ESEEEEEEEEEEETTEEEEEEEEEEETT------SCEEEEEE
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEE-eCCEEEEEEEecCCCceEEEEEEEecCC------CceEEEEe
Confidence 0 0 0011223334455556666775 47889999876 44 45444432 12347999
Q ss_pred CEEEEccCCCCCCCC-CCCccc--cCcccCCHHH-HHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHH
Q 007975 165 DYLVIAMGARANTFN-TPGVEE--NCNFLKEVED-AQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAA 240 (583)
Q Consensus 165 D~LViAtG~~~~~~~-ipG~~~--~~~~~~~~~~-a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~ 240 (583)
|+||+|||+.|..|+ +++... ..+......+ ...+. ....++++|+|||||.+|+|+|.
T Consensus 182 d~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~vvVvGgG~sg~e~a~ 244 (463)
T 3s5w_A 182 RALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQP-----------------CSSGKPMKIAIIGGGQSAAEAFI 244 (463)
T ss_dssp SEEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC------------------------CEEEEEECCSHHHHHHHH
T ss_pred CEEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhh-----------------hcccCCCeEEEECCCHhHHHHHH
Confidence 999999999877654 223221 1121111111 00000 00124679999999999999999
Q ss_pred HHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc--------------------ccHHHHHHHHHHHHh----------
Q 007975 241 ELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM--------------------FDKRITAFAEEKFSR---------- 290 (583)
Q Consensus 241 ~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~--------------------~~~~~~~~~~~~L~~---------- 290 (583)
.|.+.. ++.+|+++++.+.++|. +++.....+.+.+..
T Consensus 245 ~l~~~~------------~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 312 (463)
T 3s5w_A 245 DLNDSY------------PSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTDL 312 (463)
T ss_dssp HHHHHC------------TTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHHH
T ss_pred HHHhcC------------CCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHHH
Confidence 998862 24799999999987662 222333333333322
Q ss_pred ----------------CCCEEEeCCeEEEEeC--Ce--EEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCC
Q 007975 291 ----------------DGIDVKLGSMVVKVTD--KE--IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTN 350 (583)
Q Consensus 291 ----------------~GV~v~~~~~V~~v~~--~~--v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~ 350 (583)
.||+++++++|++++. +. +++.+..+|+..++++|.||||+|+.+++.. .++..+....
T Consensus 313 ~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~-~~l~~l~~~~ 391 (463)
T 3s5w_A 313 IERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHR-QLLEPLAEYL 391 (463)
T ss_dssp HHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-C-TTTGGGGGGB
T ss_pred HHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCcc-chhHHHHHHh
Confidence 6999999999999964 33 4555444677667999999999998777323 3333332211
Q ss_pred CcceEeCCCCccCC----CCCEEEcCccccc
Q 007975 351 RRALATDEWLRVEG----SDSIYALGDCATV 377 (583)
Q Consensus 351 ~g~i~Vd~~l~~~~----~~~VyAiGD~a~~ 377 (583)
|++.||+++++.. .|+|||+|||...
T Consensus 392 -g~i~v~~~~~~~~~~~~~~~Ifa~G~~~~~ 421 (463)
T 3s5w_A 392 -GDHEIGRDYRLQTDERCKVAIYAQGFSQAS 421 (463)
T ss_dssp -C--CCCTTSBCCBCTTBCSEEEESSCCHHH
T ss_pred -CCcccCcccccccCCCCCCeEEEcCCCccc
Confidence 7899999999854 3569999999753
No 82
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.96 E-value=1.3e-29 Score=285.44 Aligned_cols=276 Identities=17% Similarity=0.188 Sum_probs=191.4
Q ss_pred eecccCCCCCcCCCCCCCCCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhH
Q 007975 37 YSEANASSDAYSVAPPEMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPV 116 (583)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~ 116 (583)
.|..||....+......+...+++|||||||+||++||..|++.|++|+|||+++++++++.+.....+.....++...+
T Consensus 352 ~C~~np~~~~e~~~~~~~~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~ 431 (671)
T 1ps9_A 352 SCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYY 431 (671)
T ss_dssp CCSSCTTTTCTTTSCCCSCSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHH
T ss_pred EEEeCcccccccccCCCCCCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHH
Confidence 37777776544332333445678999999999999999999999999999999998877755544444443333444556
Q ss_pred HHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEe-ecCEEEEccCCCCCCCCCCCccccCcccCCHHH
Q 007975 117 RNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCM-DYDYLVIAMGARANTFNTPGVEENCNFLKEVED 195 (583)
Q Consensus 117 ~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i-~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~ 195 (583)
...+++.++++ ..++. +.. . .+ .||+||||||+.|+.+++||.++.. +.+..+
T Consensus 432 ~~~~~~~gv~~--~~~~~---------v~~---~----------~~~~~d~lviAtG~~p~~~~i~G~~~~~--v~~~~~ 485 (671)
T 1ps9_A 432 RRMIEVTGVTL--KLNHT---------VTA---D----------QLQAFDETILASGIVPRTPPIDGIDHPK--VLSYLD 485 (671)
T ss_dssp HHHHHHHTCEE--EESCC---------CCS---S----------SSCCSSEEEECCCEEECCCCCBTTTSTT--EEEHHH
T ss_pred HHHHHHcCCEE--EeCcE---------ecH---H----------HhhcCCEEEEccCCCcCCCCCCCCCCCc--EeeHHH
Confidence 66777777543 33321 100 0 34 8999999999999999999975421 112221
Q ss_pred HHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHh------Hhh----------------h
Q 007975 196 AQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDED------LFK----------------L 253 (583)
Q Consensus 196 a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~------~~~----------------~ 253 (583)
. +... ...+++|+|||||++|+|+|..|++...+. +.+ .
T Consensus 486 ~----------l~~~---------~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~ 546 (671)
T 1ps9_A 486 V----------LRDK---------APVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQ 546 (671)
T ss_dssp H----------HTSC---------CCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTT
T ss_pred H----------hhCC---------CCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhccccccccccccccc
Confidence 1 1100 124679999999999999999998764211 111 1
Q ss_pred cCCCC-CCceEEEEecCCcccC-cccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEcc
Q 007975 254 YPKVK-DSVKITLLEAADHILN-MFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWST 331 (583)
Q Consensus 254 ~p~~~-~~~~Vtlv~~~~~il~-~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~ 331 (583)
+|... ...+|+++++.+..+. .+++.....+.+.|++.||+++++++|++++++++++. .+|+..++++|.||||+
T Consensus 547 ~~~~~~~~~~v~l~~~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~--~~G~~~~i~~D~Vi~a~ 624 (671)
T 1ps9_A 547 GMQIPRSPRQIVMLQRKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVV--INGETQVLAVDNVVICA 624 (671)
T ss_dssp CCCCCCCSSEEEEECSSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEE--ETTEEEEECCSEEEECC
T ss_pred ccccCCCCcEEEEEEecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEe--cCCeEEEEeCCEEEECC
Confidence 12221 3468999999887664 46777778888999999999999999999999888775 24755569999999999
Q ss_pred CCCCchhHHHHHHHhCcCCCcceEeCCCCccCCCCCEEEcCccccc
Q 007975 332 GIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCATV 377 (583)
Q Consensus 332 G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VyAiGD~a~~ 377 (583)
|.+++. .+++.+ +. ..++||++|||+..
T Consensus 625 G~~p~~---~l~~~l--------------~~-~g~~v~aiGD~~~~ 652 (671)
T 1ps9_A 625 GQEPNR---ALAQPL--------------ID-SGKTVHLIGGCDVA 652 (671)
T ss_dssp CEEECC---TTHHHH--------------HT-TTCCEEECGGGTCC
T ss_pred CccccH---HHHHHH--------------Hh-cCCCEEEECCcCcc
Confidence 966553 333332 11 23689999999863
No 83
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.96 E-value=1.1e-29 Score=273.16 Aligned_cols=285 Identities=16% Similarity=0.172 Sum_probs=180.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC--CeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g--~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v 134 (583)
.+++|+|||||++|+++|..|++.+ ++|+|||+++.+++. +.+.+.+......++...+.+++++.+ ++++.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~-~~~g~~p~~~~~~~~~~~~~~~~~~~g--v~~~~~~~ 81 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGL-VRFGVAPDHPEVKNVINTFTQTARSDR--CAFYGNVE 81 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTH-HHHTSCTTCGGGGGHHHHHHHHHTSTT--EEEEBSCC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCce-eecccCCCCccHHHHHHHHHHHHHhCC--cEEEeeeE
Confidence 3579999999999999999998766 999999999876432 222222333333456666777777777 54443321
Q ss_pred EEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCC-CCCCCCCcc-ccCcccCCHHHHHHHHHHHHHHHHHcCC
Q 007975 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARA-NTFNTPGVE-ENCNFLKEVEDAQRIRRNVIESFEKASL 212 (583)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~-~~~~ipG~~-~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 212 (583)
+ .+.|.+.+ ..+.||+||+|||+.+ +.+++||.+ ++++ +..+.....+... +...+
T Consensus 82 --v---~~~V~~~~-----------~~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~---~~~~~~~~~~~~~---d~~~~ 139 (460)
T 1cjc_A 82 --V---GRDVTVQE-----------LQDAYHAVVLSYGAEDHQALDIPGEELPGVF---SARAFVGWYNGLP---ENREL 139 (460)
T ss_dssp --B---TTTBCHHH-----------HHHHSSEEEECCCCCEECCCCCTTTTSTTEE---EHHHHHHHHTTCG---GGTTC
T ss_pred --E---eeEEEecc-----------ceEEcCEEEEecCcCCCCCCCCCCCCCCcEE---EHHHHHHHhhcCc---ccccc
Confidence 1 12233322 1478999999999995 778999974 2222 2222221111100 00000
Q ss_pred CCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcC-----CC-CCCc-eEEEEecCCcc-------------
Q 007975 213 PNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYP-----KV-KDSV-KITLLEAADHI------------- 272 (583)
Q Consensus 213 ~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p-----~~-~~~~-~Vtlv~~~~~i------------- 272 (583)
. . ...+++|+|||+|++|+|+|..|++...+......+ .+ ..+. +|+++++.+.+
T Consensus 140 ~---~--~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~ 214 (460)
T 1cjc_A 140 A---P--DLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMI 214 (460)
T ss_dssp C---C--CTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHH
T ss_pred c---c--CCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhh
Confidence 0 0 014679999999999999999998522110000000 00 1244 79999998865
Q ss_pred -cCcc-------------------cH---HHHHHHHHHHHh--------------CCCEEEeCCeEEEEeCC----e---
Q 007975 273 -LNMF-------------------DK---RITAFAEEKFSR--------------DGIDVKLGSMVVKVTDK----E--- 308 (583)
Q Consensus 273 -l~~~-------------------~~---~~~~~~~~~L~~--------------~GV~v~~~~~V~~v~~~----~--- 308 (583)
+|.. +. .+.+.+.+.+++ +||++++++.+++|.++ .
T Consensus 215 ~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~ 294 (460)
T 1cjc_A 215 QLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAG 294 (460)
T ss_dssp TCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEE
T ss_pred cCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEE
Confidence 2311 11 123344445555 89999999999999643 2
Q ss_pred EEEEEc------------CCCeeEEeecceEEEccCCCCchhHHHHHHHh-CcCCCcceEeCCCCccCCCCCEEEcCccc
Q 007975 309 IFTKVR------------GNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV-GQTNRRALATDEWLRVEGSDSIYALGDCA 375 (583)
Q Consensus 309 v~~~~~------------~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~-~~~~~g~i~Vd~~l~~~~~~~VyAiGD~a 375 (583)
+++... .+|+..++++|+||||+|+++++. ..+ .++.+|+|.||+++|+.+.|+|||+|||+
T Consensus 295 v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l-----~gl~~~d~~g~i~vn~~~rt~~~p~vya~Gd~~ 369 (460)
T 1cjc_A 295 IRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPI-----DPSVPFDPKLGVVPNMEGRVVDVPGLYCSGWVK 369 (460)
T ss_dssp EEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCC-----CTTSCCBTTTTBCCEETTEETTCTTEEECTHHH
T ss_pred EEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCC-----CCCcccccCCCeeECCCCcCcCCCCEEEEEeCC
Confidence 444321 035545699999999999877762 234 55677899999999995479999999998
Q ss_pred c
Q 007975 376 T 376 (583)
Q Consensus 376 ~ 376 (583)
.
T Consensus 370 ~ 370 (460)
T 1cjc_A 370 R 370 (460)
T ss_dssp H
T ss_pred c
Confidence 5
No 84
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.96 E-value=1.8e-28 Score=264.40 Aligned_cols=253 Identities=12% Similarity=0.176 Sum_probs=175.1
Q ss_pred CeEEEECCcHHHHHHHHhcCC---CCCe---EEEEcCCCCCCCCCchh-----------------h-hc-----------
Q 007975 59 KKVVVLGTGWAGTSFLKNLNN---PSYD---VQVISPRNYFAFTPLLP-----------------S-VT----------- 103 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~---~g~~---Vtlie~~~~~~~~p~l~-----------------~-~~----------- 103 (583)
++|+|||||++|+++|..|++ .|++ |+|||+++..++..... . ..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999998 9999 99999987654321110 0 00
Q ss_pred ------------cccCCCcccchhHHHHHHhCCCc--EEEEEeEEEEEecCCC----EEEEecCCCCCCCCCceEEeecC
Q 007975 104 ------------CGTVEARSIVEPVRNIVRKKNVD--ICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYD 165 (583)
Q Consensus 104 ------------~g~~~~~~i~~~~~~~~~~~~i~--v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~i~yD 165 (583)
........+...++.++++.++. ++ .+++|+.|+...+ .|++.+.. +++..++.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~-~~~~V~~v~~~~~~~~~~V~~~~~~-----~g~~~~~~~d 156 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIR-FNTAVRHVEFNEDSQTFTVTVQDHT-----TDTIYSEEFD 156 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEE-CSEEEEEEEEETTTTEEEEEEEETT-----TTEEEEEEES
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEE-eCCEEEEEEEcCCCCcEEEEEEEcC-----CCceEEEEcC
Confidence 00111123445566667777765 54 4789999987765 66665421 1112478999
Q ss_pred EEEEccC--CCCCCCCCCCccccC---cccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHH
Q 007975 166 YLVIAMG--ARANTFNTPGVEENC---NFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAA 240 (583)
Q Consensus 166 ~LViAtG--~~~~~~~ipG~~~~~---~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~ 240 (583)
+||+||| +.|+.|.+||.++.. ....... ......+++|+|||+|++|+|+|.
T Consensus 157 ~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~----------------------~~~~~~~k~VvVVG~G~sg~eiA~ 214 (464)
T 2xve_A 157 YVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFR----------------------DALEFKDKTVLLVGSSYSAEDIGS 214 (464)
T ss_dssp EEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCC----------------------CGGGGTTSEEEEECCSTTHHHHHH
T ss_pred EEEECCCCCCCCccCCCCCcccCCceEEehhhhC----------------------CHhHcCCCEEEEEcCCCCHHHHHH
Confidence 9999999 789999999976421 1111100 011135679999999999999999
Q ss_pred HHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCCeEEEEEcCCCeeE
Q 007975 241 ELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETS 320 (583)
Q Consensus 241 ~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~ 320 (583)
+|+.. +.+|+++++.+.+++..- ..||+++ ..|+++++++|++. +|++
T Consensus 215 ~l~~~--------------g~~V~li~~~~~~~~~~~------------~~~V~~~--~~V~~i~~~~V~~~---dG~~- 262 (464)
T 2xve_A 215 QCYKY--------------GAKKLISCYRTAPMGYKW------------PENWDER--PNLVRVDTENAYFA---DGSS- 262 (464)
T ss_dssp HHHHT--------------TCSEEEEECSSCCCCCCC------------CTTEEEC--SCEEEECSSEEEET---TSCE-
T ss_pred HHHHh--------------CCeEEEEEECCCCCCCCC------------CCceEEc--CCeEEEeCCEEEEC---CCCE-
Confidence 99986 468999999988876421 2488887 78999998887765 4775
Q ss_pred EeecceEEEccCCCCchhHHHHHHHhCc--CCCcceEeCCC---CccCCCCCEEEcCcccc
Q 007975 321 SMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEW---LRVEGSDSIYALGDCAT 376 (583)
Q Consensus 321 ~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~---l~~~~~~~VyAiGD~a~ 376 (583)
+++|.||+|+|.+++ +..+.+.+++ ++++++ ++.+ +++ +.|+|||+|||+.
T Consensus 263 -i~~D~Vi~atG~~p~--~~~l~~~~gl~~~~~~~v-~~~~~~~~~t-~~p~i~aiGd~~~ 318 (464)
T 2xve_A 263 -EKVDAIILCTGYIHH--FPFLNDDLRLVTNNRLWP-LNLYKGVVWE-DNPKFFYIGMQDQ 318 (464)
T ss_dssp -EECSEEEECCCBCCC--CTTBCTTTCCCCCSSSCC-SSEETTTEES-SSTTEEECSCSCC
T ss_pred -EeCCEEEECCCCCCC--CCCcCcccccccCCCccc-ccccceEecC-CCCCEEEEeCccc
Confidence 899999999997665 2122223555 333355 4433 344 8999999999864
No 85
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.96 E-value=1.2e-28 Score=288.97 Aligned_cols=276 Identities=13% Similarity=0.093 Sum_probs=178.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~ 135 (583)
+.++|+|||||+||++||..|++.|+ +|+|||+++++++. +.+.. +....+.++.....+++++.+++ +..++..
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~-~~~~i-p~~~~~~~~~~~~~~~~~~~gv~--~~~~~~v 261 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGL-STSEI-PQFRLPYDVVNFEIELMKDLGVK--IICGKSL 261 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTH-HHHTS-CTTTSCHHHHHHHHHHHHTTTCE--EEESCCB
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcc-ccccC-CcccCCHHHHHHHHHHHHHCCcE--EEcccEe
Confidence 46799999999999999999999999 79999998876653 11111 11111233444455677777744 4444332
Q ss_pred EEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCC-CCCCCCC-CCccccCcccCCHHHHHHHHHHHHHHHHHcCCC
Q 007975 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA-RANTFNT-PGVEENCNFLKEVEDAQRIRRNVIESFEKASLP 213 (583)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~-~~~~~~i-pG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 213 (583)
. .+.+++.++ ..+.||+||||||+ .|+.+++ +|+.+. ..+.+..+.... +.+... ....
T Consensus 262 ~----~~~v~~~~~----------~~~~~d~vvlAtGa~~p~~l~~~~G~~~~-~gv~~a~~~L~~---~~~~~~-~~~~ 322 (1025)
T 1gte_A 262 S----ENEITLNTL----------KEEGYKAAFIGIGLPEPKTDDIFQGLTQD-QGFYTSKDFLPL---VAKSSK-AGMC 322 (1025)
T ss_dssp S----TTSBCHHHH----------HHTTCCEEEECCCCCEECCCGGGTTCCTT-TTEEEHHHHHHH---HHHHHC-BTTB
T ss_pred c----cceEEhhhc----------CccCCCEEEEecCCCCCCCCCCCCCCCCC-CCEEEhHHHHHH---HHhhcc-cccc
Confidence 1 123333322 15789999999999 4877665 465321 112233333221 111100 0000
Q ss_pred CCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCC-cccCcccHHHHHHHHHHHHhCC
Q 007975 214 NLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD-HILNMFDKRITAFAEEKFSRDG 292 (583)
Q Consensus 214 ~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~-~il~~~~~~~~~~~~~~L~~~G 292 (583)
.........+++|+|||||++|+|+|..+.++. ..+||++++.+ .+++.+++++ +.+++.|
T Consensus 323 ~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G-------------~~~Vtvv~r~~~~~~~~~~~e~-----~~~~~~G 384 (1025)
T 1gte_A 323 ACHSPLPSIRGAVIVLGAGDTAFDCATSALRCG-------------ARRVFLVFRKGFVNIRAVPEEV-----ELAKEEK 384 (1025)
T ss_dssp SCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTT-------------CSEEEEECSSCGGGCCSCHHHH-----HHHHHTT
T ss_pred cccccccccCCcEEEECCChHHHHHHHHHHHcC-------------CCEEEEEEecChhhCCCCHHHH-----HHHHHcC
Confidence 000000012459999999999999999998763 13899999998 5677777665 4678899
Q ss_pred CEEEeCCeEEEEeC--CeE---EEEEc---CC-------CeeEEeecceEEEccCCCCchhHHHHHHH-hCc--CCCcce
Q 007975 293 IDVKLGSMVVKVTD--KEI---FTKVR---GN-------GETSSMPYGMVVWSTGIAPHAIIKDFMKQ-VGQ--TNRRAL 354 (583)
Q Consensus 293 V~v~~~~~V~~v~~--~~v---~~~~~---~~-------G~~~~i~~D~vI~a~G~~~~p~~~~l~~~-~~~--~~~g~i 354 (583)
|++++++.++++.. +.+ ++... .+ |+..++++|.||+|+|..++ .. .++.. .++ +.+|+|
T Consensus 385 v~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~-~~-~l~~~~~gl~~~~~G~I 462 (1025)
T 1gte_A 385 CEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLR-DP-KVKEALSPIKFNRWDLP 462 (1025)
T ss_dssp CEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECC-CH-HHHHHTTTSCBCTTSSB
T ss_pred CEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCC-ch-hhhhcccCceECCCCCE
Confidence 99999999999863 433 33210 11 33346999999999996432 22 45555 355 678999
Q ss_pred EeCC-CCccCCCCCEEEcCcccc
Q 007975 355 ATDE-WLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 355 ~Vd~-~l~~~~~~~VyAiGD~a~ 376 (583)
.||+ ++|| +.|+|||+|||+.
T Consensus 463 ~vd~~~~~T-s~~~VfA~GD~~~ 484 (1025)
T 1gte_A 463 EVDPETMQT-SEPWVFAGGDIVG 484 (1025)
T ss_dssp CCCTTTCBC-SSTTEEECSGGGC
T ss_pred EECCCCCcc-CCCCEEEeCCCCC
Confidence 9997 8998 8999999999975
No 86
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.95 E-value=7.8e-28 Score=280.09 Aligned_cols=269 Identities=15% Similarity=0.162 Sum_probs=180.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchh--hhccccCCCcccchhHHHHHHhC-CCcEEEE-EeE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLP--SVTCGTVEARSIVEPVRNIVRKK-NVDICFW-EAE 133 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~--~~~~g~~~~~~i~~~~~~~~~~~-~i~v~~~-~~~ 133 (583)
.++|||||||+||++||..|++.|++|+|||++++++++.... ....+. ...+....+.+.+.+. + ++++ ..+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~~~k~~i~~~-~~~~~~~~~~~~l~~~~~--v~~~~~~~ 204 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLDTAGEQIDGM-DSSAWIEQVTSELAEAEE--TTHLQRTT 204 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGGSSCCEETTE-EHHHHHHHHHHHHHHSTT--EEEESSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceeccCCccccCCC-CHHHHHHHHHHHHhhcCC--cEEEeCCE
Confidence 4689999999999999999999999999999998876554410 011111 1112223333444443 5 4444 568
Q ss_pred EEEEecCCCEEEEecCCC-CCCC------CCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHH
Q 007975 134 CFKIDAENKKVYCRSSQN-TNLN------GKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIES 206 (583)
Q Consensus 134 v~~id~~~~~v~~~~~~~-~~~~------~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~ 206 (583)
|..++.++....++.... .... +.....+.||+||||||+.|+.+++||.+... +.+..++.. .+
T Consensus 205 V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~g--v~~~~~~~~---~l--- 276 (965)
T 2gag_A 205 VFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPG--IMLAGAVRS---YL--- 276 (965)
T ss_dssp EEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTT--EEEHHHHHH---HH---
T ss_pred EEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCC--EEEhHHHHH---HH---
Confidence 888887654333321110 0000 01123789999999999999989999975321 122222211 11
Q ss_pred HHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHH
Q 007975 207 FEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEE 286 (583)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~ 286 (583)
.... ...+++++|||+|++|+|+|..|.++ +.+|+++++.+++++. .+
T Consensus 277 -~~~~--------~~~gk~vvViGgG~~g~E~A~~L~~~--------------G~~Vtvv~~~~~~~~~---------~~ 324 (965)
T 2gag_A 277 -NRYG--------VRAGARIAVATTNDSAYELVRELAAT--------------GGVVAVIDARSSISAA---------AA 324 (965)
T ss_dssp -HTTC--------EESCSSEEEEESSTTHHHHHHHHGGG--------------TCCSEEEESCSSCCHH---------HH
T ss_pred -HhcC--------CCCCCeEEEEcCCHHHHHHHHHHHHc--------------CCcEEEEECCCccchh---------HH
Confidence 1000 12356999999999999999999876 4679999999887632 56
Q ss_pred HHHhCCCEEEeCCeEEEEeC--C----eEEEEEc-C---CCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEe
Q 007975 287 KFSRDGIDVKLGSMVVKVTD--K----EIFTKVR-G---NGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALAT 356 (583)
Q Consensus 287 ~L~~~GV~v~~~~~V~~v~~--~----~v~~~~~-~---~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~V 356 (583)
.|++.||+|++++.|+++++ + .|++.+. . +|+..++++|.||+++|.+++ + .++... ++.|.|
T Consensus 325 ~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~--~-~l~~~~----~g~i~v 397 (965)
T 2gag_A 325 QAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPV--V-HLHSQR----QGKLDW 397 (965)
T ss_dssp HHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEEC--C-HHHHHT----TCCEEE
T ss_pred HHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcC--h-HHHHhC----CCcEEE
Confidence 78999999999999999975 3 4555531 0 254346999999999996544 4 344333 467999
Q ss_pred CCCCcc----CCCCCEEEcCcccc
Q 007975 357 DEWLRV----EGSDSIYALGDCAT 376 (583)
Q Consensus 357 d~~l~~----~~~~~VyAiGD~a~ 376 (583)
|++++. ++.|+|||+|||+.
T Consensus 398 d~~~~~~v~~ts~p~IyAaGD~a~ 421 (965)
T 2gag_A 398 DTTIHAFVPADAVANQHLAGAMTG 421 (965)
T ss_dssp ETTTTEEEECSCCTTEEECGGGGT
T ss_pred cCcccccccCCCCCCEEEEEecCC
Confidence 998872 48999999999985
No 87
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=9.2e-28 Score=262.88 Aligned_cols=267 Identities=15% Similarity=0.195 Sum_probs=180.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcC-CCCCeEEEEcCCCCCCCCCchh---hh----c-------------------cccCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLN-NPSYDVQVISPRNYFAFTPLLP---SV----T-------------------CGTVEA 109 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~-~~g~~Vtlie~~~~~~~~p~l~---~~----~-------------------~g~~~~ 109 (583)
...+|||||||++|+++|..|+ +.|++|+|||+++..+++.... .+ . ......
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~ 86 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQ 86 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCH
Confidence 3579999999999999999999 9999999999987654322111 00 0 000111
Q ss_pred cccchhHHHHHHhCCC--cEEEEEeEEEEEecCCC----EEEEecCCCCCCCCCceEEeecCEEEEccC--CCCCCCCCC
Q 007975 110 RSIVEPVRNIVRKKNV--DICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTP 181 (583)
Q Consensus 110 ~~i~~~~~~~~~~~~i--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~i~yD~LViAtG--~~~~~~~ip 181 (583)
.++...+...+++.++ +++ .+.+|+.++.+.+ .|.+.++. ++.||+||+|+| +.|..|++|
T Consensus 87 ~ei~~~l~~~~~~~g~~~~i~-~~~~V~~i~~~~~~~~~~V~~~~G~----------~i~ad~lV~AtG~~s~p~~p~ip 155 (540)
T 3gwf_A 87 PEILEYLEDVVDRFDLRRHFK-FGTEVTSALYLDDENLWEVTTDHGE----------VYRAKYVVNAVGLLSAINFPNLP 155 (540)
T ss_dssp HHHHHHHHHHHHHTTCGGGEE-ESCCEEEEEEETTTTEEEEEETTSC----------EEEEEEEEECCCSCCSBCCCCCT
T ss_pred HHHHHHHHHHHHHcCCcceeE-eccEEEEEEEeCCCCEEEEEEcCCC----------EEEeCEEEECCcccccCCCCCCC
Confidence 2455566777778776 565 4788999987765 45554332 799999999999 689999999
Q ss_pred CccccCcc-cCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCC
Q 007975 182 GVEENCNF-LKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (583)
Q Consensus 182 G~~~~~~~-~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~ 260 (583)
|+++.... +.+.. +. ......+++|+|||+|.+|+|+|.+|+.. +
T Consensus 156 G~~~f~g~~~~~~~-----------------~~---~~~~~~~krV~VIG~G~sgve~a~~l~~~--------------~ 201 (540)
T 3gwf_A 156 GLDTFEGETIHTAA-----------------WP---EGKSLAGRRVGVIGTGSTGQQVITSLAPE--------------V 201 (540)
T ss_dssp TGGGCCSEEEEGGG-----------------CC---SSCCCTTSEEEEECCSHHHHHHHHHHTTT--------------C
T ss_pred CccccCCCEEEeec-----------------CC---CccccccceEEEECCCchHHHHHHHHHhh--------------C
Confidence 98642110 11100 00 01113567999999999999999999875 5
Q ss_pred ceEEEEecCCc-ccCccc----HHHHHHHH--------------------------------------------------
Q 007975 261 VKITLLEAADH-ILNMFD----KRITAFAE-------------------------------------------------- 285 (583)
Q Consensus 261 ~~Vtlv~~~~~-il~~~~----~~~~~~~~-------------------------------------------------- 285 (583)
.+|+++++.+. ++|.++ +...+.+.
T Consensus 202 ~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~ 281 (540)
T 3gwf_A 202 EHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRF 281 (540)
T ss_dssp SEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHH
T ss_pred CEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhh
Confidence 79999999998 455433 22211111
Q ss_pred -----------------------HH---------------------------------HHhCCCEEEe--CCeEEEEeCC
Q 007975 286 -----------------------EK---------------------------------FSRDGIDVKL--GSMVVKVTDK 307 (583)
Q Consensus 286 -----------------------~~---------------------------------L~~~GV~v~~--~~~V~~v~~~ 307 (583)
+. |.+.+|+++. ++.|++|+++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~ 361 (540)
T 3gwf_A 282 MFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAK 361 (540)
T ss_dssp HHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSS
T ss_pred hhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecC
Confidence 00 1145899986 7899999999
Q ss_pred eEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeC----------CCCccCCCCCEEEc-Ccccc
Q 007975 308 EIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATD----------EWLRVEGSDSIYAL-GDCAT 376 (583)
Q Consensus 308 ~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd----------~~l~~~~~~~VyAi-GD~a~ 376 (583)
+|++.+ |++ +++|+||+|||+.+.. .++..+++..++.+.++ ..+.+++.||+|.+ |..+.
T Consensus 362 gv~~~d---G~~--~~~DvIV~ATGf~~~~---~~~~~~~i~g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~ 433 (540)
T 3gwf_A 362 GVVTED---GVL--HELDVLVFATGFDAVD---GNYRRIEIRGRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGP 433 (540)
T ss_dssp EEEETT---CCE--EECSEEEECCCBSCSS---HHHHTSEEECGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCB
T ss_pred eEEcCC---CCE--EECCEEEECCccCccc---cCcCcceEECCCCcCHHHhhccChhhccccccCCCCceEEEecCCCC
Confidence 988754 875 9999999999986653 13334444333333333 23677889999999 87653
No 88
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.94 E-value=4.1e-27 Score=252.82 Aligned_cols=254 Identities=15% Similarity=0.131 Sum_probs=166.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC--eEEEEcCCCCCCCCCchhhh----------------------------ccc-
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFTPLLPSV----------------------------TCG- 105 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~--~Vtlie~~~~~~~~p~l~~~----------------------------~~g- 105 (583)
+.++|+|||||++|+++|..|++.|. +|+|||+++..++....... ...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 45799999999999999999999999 99999998655332211100 000
Q ss_pred -----------------c---------CCCcccchhHHHHHHhCCCcEEEEEeEEEEEecCCC--EEEEecCCCCCCCCC
Q 007975 106 -----------------T---------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENK--KVYCRSSQNTNLNGK 157 (583)
Q Consensus 106 -----------------~---------~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~--~v~~~~~~~~~~~~~ 157 (583)
. .....+...+.++++..+..++ .+++|+.|+...+ .|++.+.. ++
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~-~~t~V~~v~~~~~~~~V~~~~~~-----~G 158 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIK-LATDVLDIEKKDGSWVVTYKGTK-----AG 158 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEE-CSEEEEEEEEETTEEEEEEEESS-----TT
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEE-eCCEEEEEEeCCCeEEEEEeecC-----CC
Confidence 0 0001223344555555555565 4889999988766 45544311 01
Q ss_pred c-eEEeecCEEEEccCC--CCCCCCCCCcccc-------CcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEE
Q 007975 158 E-EFCMDYDYLVIAMGA--RANTFNTPGVEEN-------CNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFV 227 (583)
Q Consensus 158 ~-~~~i~yD~LViAtG~--~~~~~~ipG~~~~-------~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vv 227 (583)
+ ..++.||+||+|+|+ .|+.|.+||.++. ..+.+... ......+++|+
T Consensus 159 ~~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~----------------------~~~~~~~k~Vv 216 (447)
T 2gv8_A 159 SPISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFR----------------------EPELFVGESVL 216 (447)
T ss_dssp CCEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCC----------------------CGGGGTTCCEE
T ss_pred CeeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccC----------------------ChhhcCCCEEE
Confidence 1 236899999999998 7888889987531 11111100 01112467999
Q ss_pred EEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCce-EEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEe-
Q 007975 228 IVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVK-ITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVT- 305 (583)
Q Consensus 228 VVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~-Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~- 305 (583)
|||+|++|+|+|.+|+.. +.+ |+++++.+.+ +++.||++ +..|++++
T Consensus 217 VvG~G~sg~e~A~~l~~~--------------~~~~V~l~~r~~~~---------------l~~~~i~~--~~~v~~~~~ 265 (447)
T 2gv8_A 217 VVGGASSANDLVRHLTPV--------------AKHPIYQSLLGGGD---------------IQNESLQQ--VPEITKFDP 265 (447)
T ss_dssp EECSSHHHHHHHHHHTTT--------------SCSSEEEECTTCCS---------------CBCSSEEE--ECCEEEEET
T ss_pred EEccCcCHHHHHHHHHHH--------------hCCcEEEEeCCCCc---------------CCCCCeEE--ecCeEEEec
Confidence 999999999999999876 357 9999998765 34567774 57899995
Q ss_pred -CCeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHH-----HHHh--CcCCCcceEeCCCCcc--CCCCCEEEcCccc
Q 007975 306 -DKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDF-----MKQV--GQTNRRALATDEWLRV--EGSDSIYALGDCA 375 (583)
Q Consensus 306 -~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l-----~~~~--~~~~~g~i~Vd~~l~~--~~~~~VyAiGD~a 375 (583)
++.|++. +|+. ++++|.||||+|+.++. .+ ++.+ ++..++.+.++.+.++ ++.|+||++|||.
T Consensus 266 ~~~~v~~~---dG~~-~~~~D~vi~atG~~~~~---~~l~~~~l~~~~~~i~~~~~~~~~~~~~v~~~~~p~l~~~G~~~ 338 (447)
T 2gv8_A 266 TTREIYLK---GGKV-LSNIDRVIYCTGYLYSV---PFPSLAKLKSPETKLIDDGSHVHNVYQHIFYIPDPTLAFVGLAL 338 (447)
T ss_dssp TTTEEEET---TTEE-ECCCSEEEECCCBCCCC---CCHHHHSCCSTTTCCCSSSSSCCSEETTTEETTCTTEEESSCCB
T ss_pred CCCEEEEC---CCCE-eccCCEEEECCCCCcCC---CCCcccccccccCceecCCCcccccccccccCCCCcEEEEeccc
Confidence 3456654 4763 47999999999976652 22 2222 2322344445544442 4789999999996
Q ss_pred c
Q 007975 376 T 376 (583)
Q Consensus 376 ~ 376 (583)
.
T Consensus 339 ~ 339 (447)
T 2gv8_A 339 H 339 (447)
T ss_dssp S
T ss_pred c
Confidence 5
No 89
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.93 E-value=1.4e-26 Score=253.83 Aligned_cols=181 Identities=12% Similarity=0.091 Sum_probs=118.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhc--------------------------cccCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT--------------------------CGTVEA 109 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~--------------------------~g~~~~ 109 (583)
+..++|||||||++|+++|..|++.|++|+|||+++.++++.....+. ......
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~ 86 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQ 86 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCH
Confidence 345799999999999999999999999999999987654432110000 011112
Q ss_pred cccchhHHHHHHhCCC--cEEEEEeEEEEEecCCC----EEEEecCCCCCCCCCceEEeecCEEEEccC--CCCCCCCCC
Q 007975 110 RSIVEPVRNIVRKKNV--DICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTP 181 (583)
Q Consensus 110 ~~i~~~~~~~~~~~~i--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~i~yD~LViAtG--~~~~~~~ip 181 (583)
.++...++.++++.++ +++ ++.+|+.++.+.+ .|.+.++. ++.||+||+|+| +.|+.|++|
T Consensus 87 ~ei~~yl~~~~~~~~l~~~i~-~~~~V~~~~~~~~~~~w~V~~~~G~----------~~~ad~lV~AtG~~s~p~~p~ip 155 (545)
T 3uox_A 87 PEMLRYVNRAADAMDVRKHYR-FNTRVTAARYVENDRLWEVTLDNEE----------VVTCRFLISATGPLSASRMPDIK 155 (545)
T ss_dssp HHHHHHHHHHHHHHTCGGGEE-CSCCEEEEEEEGGGTEEEEEETTTE----------EEEEEEEEECCCSCBC---CCCT
T ss_pred HHHHHHHHHHHHHcCCcCcEE-ECCEEEEEEEeCCCCEEEEEECCCC----------EEEeCEEEECcCCCCCCcCCCCC
Confidence 3455667777777765 565 4778888887654 55554332 799999999999 789999999
Q ss_pred CccccCc-ccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCC
Q 007975 182 GVEENCN-FLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (583)
Q Consensus 182 G~~~~~~-~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~ 260 (583)
|+++... .+.+... ....+..+......+++|+|||+|++|+|+|.+|++. +
T Consensus 156 G~~~f~g~~~h~~~~-------------~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~--------------~ 208 (545)
T 3uox_A 156 GIDSFKGESFHSSRW-------------PTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAET--------------A 208 (545)
T ss_dssp TGGGCCSEEEEGGGC-------------CBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTT--------------B
T ss_pred CccccCCCeEEcccc-------------cccccccccccccCCCeEEEECCCccHHHHHHHHHhh--------------C
Confidence 9864211 0111000 0000000000123568999999999999999999875 4
Q ss_pred ceEEEEecCCcc-cC
Q 007975 261 VKITLLEAADHI-LN 274 (583)
Q Consensus 261 ~~Vtlv~~~~~i-l~ 274 (583)
.+|+++++.+++ +|
T Consensus 209 ~~Vtv~~r~~~~i~p 223 (545)
T 3uox_A 209 KELYVFQRTPNWCTP 223 (545)
T ss_dssp SEEEEEESSCCCCEE
T ss_pred CEEEEEEcCCCcccc
Confidence 699999999973 44
No 90
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.93 E-value=1.7e-26 Score=250.72 Aligned_cols=239 Identities=19% Similarity=0.206 Sum_probs=161.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhh-hccccC-CCcccchhHHHHHHhCCCcEEEEEeEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPS-VTCGTV-EARSIVEPVRNIVRKKNVDICFWEAECF 135 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~-~~~g~~-~~~~i~~~~~~~~~~~~i~v~~~~~~v~ 135 (583)
.++|||||||++|+++|..|++. ++|+|||+++++++...... ...+.. ...++...+.+.+ ..++++ +.+.+|.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~~~v~~-~~~~~v~ 184 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-NENTKI-YLETSAL 184 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-CTTEEE-ETTEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-hcCCEE-EcCCEEE
Confidence 46899999999999999999988 99999999988766532211 011110 1112222222222 335333 2467888
Q ss_pred EEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCC
Q 007975 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNL 215 (583)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 215 (583)
.++.+++.+.+.... +.+...+.||+||+|||+.|..+++||.+.. .+.+..++..+.+. ..
T Consensus 185 ~i~~~~~~~~~~~~~-----~~~~~~~~~d~lvlAtGa~~~~~~~~g~~~~--gv~~~~~~~~~~~~-------~~---- 246 (493)
T 1y56_A 185 GVFDKGEYFLVPVVR-----GDKLIEILAKRVVLATGAIDSTMLFENNDMP--GVFRRDFALEVMNV-------WE---- 246 (493)
T ss_dssp CCEECSSSEEEEEEE-----TTEEEEEEESCEEECCCEEECCCCCTTTTST--TEEEHHHHHHHHHT-------SC----
T ss_pred EEEcCCcEEEEEEec-----CCeEEEEECCEEEECCCCCccCCCCCCCCCC--CEEEcHHHHHHHHh-------cc----
Confidence 888877655442211 1112479999999999999998899987522 12233443332211 00
Q ss_pred CHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEE
Q 007975 216 SDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDV 295 (583)
Q Consensus 216 ~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v 295 (583)
...+++++|||+|++|+| +.++++||++
T Consensus 247 ----~~~~~~vvViGgG~~gle------------------------------------------------~~l~~~GV~v 274 (493)
T 1y56_A 247 ----VAPGRKVAVTGSKADEVI------------------------------------------------QELERWGIDY 274 (493)
T ss_dssp ----BCSCSEEEEESTTHHHHH------------------------------------------------HHHHHHTCEE
T ss_pred ----cCCCCEEEEECCCHHHHH------------------------------------------------HHHHhCCcEE
Confidence 123569999999999987 4466789999
Q ss_pred EeCCeEEEEeCCe-EEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc----CCCcceE-eCCCCccCCCCCEE
Q 007975 296 KLGSMVVKVTDKE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ----TNRRALA-TDEWLRVEGSDSIY 369 (583)
Q Consensus 296 ~~~~~V~~v~~~~-v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~----~~~g~i~-Vd~~l~~~~~~~Vy 369 (583)
++++.|+++++++ +......+|++ +++|.||+++|++++. +++..+++ +.+|+|. ||++++ +.|+||
T Consensus 275 ~~~~~v~~i~~~~~v~~v~~~~g~~--i~aD~Vv~a~G~~p~~---~l~~~~g~~~~~~~~g~i~~vd~~~~--s~~~vy 347 (493)
T 1y56_A 275 VHIPNVKRVEGNEKVERVIDMNNHE--YKVDALIFADGRRPDI---NPITQAGGKLRFRRGYYSPVLDEYHR--IKDGIY 347 (493)
T ss_dssp EECSSEEEEECSSSCCEEEETTCCE--EECSEEEECCCEEECC---HHHHHTTCCEEEETTEEEECCCTTSE--EETTEE
T ss_pred EeCCeeEEEecCCceEEEEeCCCeE--EEeCEEEECCCcCcCc---hHHHhcCCCccccCCceeeccccccC--cCCCEE
Confidence 9999999998643 32222345654 9999999999965543 45666665 3578887 899999 789999
Q ss_pred EcCcccc
Q 007975 370 ALGDCAT 376 (583)
Q Consensus 370 AiGD~a~ 376 (583)
|+|||+.
T Consensus 348 a~GD~~~ 354 (493)
T 1y56_A 348 VAGSAVS 354 (493)
T ss_dssp ECSTTTC
T ss_pred EEeccCC
Confidence 9999985
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.93 E-value=8.5e-26 Score=247.79 Aligned_cols=176 Identities=14% Similarity=0.218 Sum_probs=122.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhh---h-----------------------ccccCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPS---V-----------------------TCGTVEA 109 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~---~-----------------------~~g~~~~ 109 (583)
...++|||||||++|+++|..|++.|++|+|||+++.++++..... + .......
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~ 98 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQ 98 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBH
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCH
Confidence 3457999999999999999999999999999999765543211000 0 0001122
Q ss_pred cccchhHHHHHHhCCC--cEEEEEeEEEEEecCCC----EEEEecCCCCCCCCCceEEeecCEEEEccC--CCCCCCCCC
Q 007975 110 RSIVEPVRNIVRKKNV--DICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTP 181 (583)
Q Consensus 110 ~~i~~~~~~~~~~~~i--~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~i~yD~LViAtG--~~~~~~~ip 181 (583)
.++...++..+++.++ +++ .+.+|+.++.+.+ .|.+.++. ++.||+||+|+| +.|..|++|
T Consensus 99 ~ei~~yl~~~~~~~g~~~~i~-~~~~V~~i~~~~~~~~w~V~~~~G~----------~i~ad~lV~AtG~~s~p~~p~ip 167 (549)
T 4ap3_A 99 PEILAYLEHVADRFDLRRDIR-FDTRVTSAVLDEEGLRWTVRTDRGD----------EVSARFLVVAAGPLSNANTPAFD 167 (549)
T ss_dssp HHHHHHHHHHHHHTTCGGGEE-CSCCEEEEEEETTTTEEEEEETTCC----------EEEEEEEEECCCSEEECCCCCCT
T ss_pred HHHHHHHHHHHHHcCCCccEE-ECCEEEEEEEcCCCCEEEEEECCCC----------EEEeCEEEECcCCCCCCCCCCCC
Confidence 3456667777888876 565 4778999987765 55554332 799999999999 789999999
Q ss_pred CccccCc-ccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCC
Q 007975 182 GVEENCN-FLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS 260 (583)
Q Consensus 182 G~~~~~~-~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~ 260 (583)
|+++... .+.+.. ++. +.....+++|+|||+|++|+|+|.+|++. +
T Consensus 168 G~~~f~g~~~~~~~-----------------~~~--~~~~~~~krV~VIG~G~sgve~a~~l~~~--------------~ 214 (549)
T 4ap3_A 168 GLDRFTGDIVHTAR-----------------WPH--DGVDFTGKRVGVIGTGSSGIQSIPIIAEQ--------------A 214 (549)
T ss_dssp TGGGCCSEEEEGGG-----------------CCT--TCCCCBTCEEEEECCSHHHHHHHHHHHHH--------------B
T ss_pred CcccCCCceEEecc-----------------ccc--cccccCCCEEEEECCCchHHHHHHHHHhh--------------C
Confidence 9864211 111100 000 00113567999999999999999999986 4
Q ss_pred ceEEEEecCCcc-cCc
Q 007975 261 VKITLLEAADHI-LNM 275 (583)
Q Consensus 261 ~~Vtlv~~~~~i-l~~ 275 (583)
.+|+++++.+.+ +|.
T Consensus 215 ~~Vtv~~r~~~~ilp~ 230 (549)
T 4ap3_A 215 EQLFVFQRSANYSIPA 230 (549)
T ss_dssp SEEEEEESSCCCEEEC
T ss_pred CEEEEEECCCCccccC
Confidence 699999999973 444
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.92 E-value=1.9e-24 Score=237.53 Aligned_cols=172 Identities=16% Similarity=0.261 Sum_probs=113.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc---hhh-----------hc------------cccCCCc
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL---LPS-----------VT------------CGTVEAR 110 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~---l~~-----------~~------------~g~~~~~ 110 (583)
...+|||||||++|+++|..|++.|++|+|||+++.++++.. .+. +. .......
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 357999999999999999999989999999999876543210 000 00 0001112
Q ss_pred ccchhHHHHHHhCC--CcEEEEEeEEEEEecCCC----EEEEecCCCCCCCCCceEEeecCEEEEccC--CCCCCCCCCC
Q 007975 111 SIVEPVRNIVRKKN--VDICFWEAECFKIDAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMG--ARANTFNTPG 182 (583)
Q Consensus 111 ~i~~~~~~~~~~~~--i~v~~~~~~v~~id~~~~----~v~~~~~~~~~~~~~~~~~i~yD~LViAtG--~~~~~~~ipG 182 (583)
++...++.+.++.+ .+++ .+.+|+.++.+.. .|++.++. ++.+|+||+|+| +.|..|.+||
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~-~~~~V~~~~~~~~~~~w~V~~~~G~----------~~~ad~vV~AtG~~s~p~~p~i~G 163 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGIT-FHTTVTAAAFDEATNTWTVDTNHGD----------RIRARYLIMASGQLSVPQLPNFPG 163 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEE-CSCCEEEEEEETTTTEEEEEETTCC----------EEEEEEEEECCCSCCCCCCCCCTT
T ss_pred HHHHHHHHHHHHcCCCceEE-cCcEEEEEEEcCCCCeEEEEECCCC----------EEEeCEEEECcCCCCCCCCCCCCC
Confidence 23444555556655 3455 3778888876542 34443322 789999999999 5688888999
Q ss_pred ccccCc-ccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCc
Q 007975 183 VEENCN-FLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV 261 (583)
Q Consensus 183 ~~~~~~-~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~ 261 (583)
++.... .+.+. .++. +.....+++|+|||+|.+|+|+|..++.. +.
T Consensus 164 ~~~f~G~~~hs~-----------------~~~~--~~~~~~gk~V~VIG~G~sg~e~a~~l~~~--------------~~ 210 (542)
T 1w4x_A 164 LKDFAGNLYHTG-----------------NWPH--EPVDFSGQRVGVIGTGSSGIQVSPQIAKQ--------------AA 210 (542)
T ss_dssp GGGCCSEEEEGG-----------------GCCS--SCCCCBTCEEEEECCSHHHHHHHHHHHHH--------------BS
T ss_pred cccCCCceEECC-----------------CCCC--chhccCCCEEEEECCCccHHHHHHHHhhc--------------Cc
Confidence 753211 01110 0000 00113568999999999999999999886 36
Q ss_pred eEEEEecCCcc
Q 007975 262 KITLLEAADHI 272 (583)
Q Consensus 262 ~Vtlv~~~~~i 272 (583)
+|+++++.+.+
T Consensus 211 ~vtv~~r~~~~ 221 (542)
T 1w4x_A 211 ELFVFQRTPHF 221 (542)
T ss_dssp EEEEEESSCCC
T ss_pred eEEEEEcCCcc
Confidence 89999988765
No 93
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.85 E-value=3e-20 Score=173.77 Aligned_cols=127 Identities=22% Similarity=0.281 Sum_probs=104.8
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC---------cc-----cHHHHHHHHHHHHh
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN---------MF-----DKRITAFAEEKFSR 290 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~---------~~-----~~~~~~~~~~~L~~ 290 (583)
+++|||||++|+|+|..|++. +.+|+++++.+.+++ .+ ++++.+.+.+.+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~--------------g~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARA--------------GLKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHC--------------CCcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 799999999999999999885 579999999887662 33 57889999999999
Q ss_pred CCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc--CCCcceEeCCCCccCCCC
Q 007975 291 DGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ--TNRRALATDEWLRVEGSD 366 (583)
Q Consensus 291 ~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~--~~~g~i~Vd~~l~~~~~~ 366 (583)
.||+++++ +|++++. +.+.+.. .+| + +++|.||+|+|.. |. +.+.+++ + +|.|.||+++|+ +.|
T Consensus 69 ~gv~v~~~-~v~~i~~~~~~~~v~~-~~g-~--i~ad~vI~A~G~~--~~---~~~~~g~~~~-~g~i~vd~~~~t-~~~ 136 (180)
T 2ywl_A 69 YGAEVRPG-VVKGVRDMGGVFEVET-EEG-V--EKAERLLLCTHKD--PT---LPSLLGLTRR-GAYIDTDEGGRT-SYP 136 (180)
T ss_dssp TTCEEEEC-CCCEEEECSSSEEEEC-SSC-E--EEEEEEEECCTTC--CH---HHHHHTCCEE-TTEECCCTTCBC-SST
T ss_pred cCCEEEeC-EEEEEEEcCCEEEEEE-CCC-E--EEECEEEECCCCC--CC---ccccCCCCcc-CceEEeCCCCCc-CCC
Confidence 99999999 9999964 4455543 446 3 9999999999965 32 3444555 6 889999999999 899
Q ss_pred CEEEcCccccc
Q 007975 367 SIYALGDCATV 377 (583)
Q Consensus 367 ~VyAiGD~a~~ 377 (583)
+|||+|||+..
T Consensus 137 ~i~a~GD~~~~ 147 (180)
T 2ywl_A 137 RVYAAGVARGK 147 (180)
T ss_dssp TEEECGGGGTC
T ss_pred CEEEeecccCc
Confidence 99999999863
No 94
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.79 E-value=7.4e-18 Score=183.02 Aligned_cols=283 Identities=13% Similarity=0.126 Sum_probs=169.0
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcCC--------------CCCeEEEEcCCCCCCCCCc--hhhhccc-------------
Q 007975 55 GIKKKKVVVLGTGWAGTSFLKNLNN--------------PSYDVQVISPRNYFAFTPL--LPSVTCG------------- 105 (583)
Q Consensus 55 ~~~~~~VVIIGgG~aGl~aA~~L~~--------------~g~~Vtlie~~~~~~~~p~--l~~~~~g------------- 105 (583)
....++|||||+||+||++|..|.+ .+...+.+|+.+.+.|.+. ++.....
T Consensus 36 ~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P 115 (501)
T 4b63_A 36 QDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDP 115 (501)
T ss_dssp TTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCT
T ss_pred CCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCC
Confidence 3456899999999999999987752 2356788999988776531 2211100
Q ss_pred -------------------------cCCCcccchhHHHHHHhCCCcEEEEEeEEEEEecCC----------CEEEEecCC
Q 007975 106 -------------------------TVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAEN----------KKVYCRSSQ 150 (583)
Q Consensus 106 -------------------------~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~----------~~v~~~~~~ 150 (583)
.....++..+++...++.+..++| ..+|+.+.+.. ..|++.++.
T Consensus 116 ~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf-~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~ 194 (501)
T 4b63_A 116 RSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAY-GEEVVEVIPGKSDPSSSVVDFFTVRSRNVE 194 (501)
T ss_dssp TCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEE-SEEEEEEEEECSSTTSSCBCEEEEEEEETT
T ss_pred CCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEc-ceEEEeeccccccccccccceEEEEEecCC
Confidence 001123455566666666656775 78888886532 256665543
Q ss_pred CCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEEEEc
Q 007975 151 NTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFVIVG 230 (583)
Q Consensus 151 ~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vvVVG 230 (583)
..+...+.+++||+|||..|..|+.++.....++.....+ ..... . ....++|+|+|||
T Consensus 195 -----~g~~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~------~~~~~-~---------~~~~~gKrV~VVG 253 (501)
T 4b63_A 195 -----TGEISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCT------TLPAL-L---------KDKSKPYNIAVLG 253 (501)
T ss_dssp -----TCCEEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHH------HHHHH-S---------CCTTSCCEEEEEC
T ss_pred -----CceEEEEEeCEEEECcCCCCCCCCCCCCCcceeecccccc------chhhc-c---------ccccCCcEEEEEC
Confidence 2234578999999999998877766554433332222111 11100 0 1124678999999
Q ss_pred CChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc---------ccHH-----------HHH--------
Q 007975 231 GGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM---------FDKR-----------ITA-------- 282 (583)
Q Consensus 231 gG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~---------~~~~-----------~~~-------- 282 (583)
+|.||+|++.+|++.. ...+|+++.|.+.+.|. +.++ ...
T Consensus 254 ~G~SA~ei~~~L~~~~------------~~~~v~~~~R~~~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~ 321 (501)
T 4b63_A 254 SGQSAAEIFHDLQKRY------------PNSRTTLIMRDSAMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKA 321 (501)
T ss_dssp CSHHHHHHHHHHHHHS------------TTCEEEEECSSSSCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGG
T ss_pred CcHHHHHHHHHHHhcC------------CCceEEEEeCCCccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 9999999999998642 24799999998765432 1111 111
Q ss_pred ------------HHHHHHHh----------CCCEEEeCCeEEEEeC----CeEEEEE-----------cCCCeeEEeecc
Q 007975 283 ------------FAEEKFSR----------DGIDVKLGSMVVKVTD----KEIFTKV-----------RGNGETSSMPYG 325 (583)
Q Consensus 283 ------------~~~~~L~~----------~GV~v~~~~~V~~v~~----~~v~~~~-----------~~~G~~~~i~~D 325 (583)
.+.+.+-+ ....+..+..+..++. ..+.+.. ..+|++ +++|
T Consensus 322 ~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~~~l~~~~~v~~~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~--~~~D 399 (501)
T 4b63_A 322 TNYSVVRLELIEEIYNDMYLQRVKNPDETQWQHRILPERKITRVEHHGPQSRMRIHLKSSKPESEGAANDVKET--LEVD 399 (501)
T ss_dssp GTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCSSEEECSEEEEEEECCSSSSCEEEEEEESCC--------CCCE--EEES
T ss_pred hhhcccCHHHHHHHHHHHHhhccCCCcccccceeecCCcceeeeeecCCCCeEEEEeeeeEEeCCeeEeCCCeE--EECC
Confidence 11111110 1234555666655542 1222211 134664 9999
Q ss_pred eEEEccCCCCchhHHHHHHHh---CcCCCcceEeCCCCccC-------CCCCEEEcCcc
Q 007975 326 MVVWSTGIAPHAIIKDFMKQV---GQTNRRALATDEWLRVE-------GSDSIYALGDC 374 (583)
Q Consensus 326 ~vI~a~G~~~~p~~~~l~~~~---~~~~~g~i~Vd~~l~~~-------~~~~VyAiGD~ 374 (583)
.||+|||+++.... .|+..+ ..+.+|++.|+.++++. ..++||+.|=|
T Consensus 400 ~VI~ATGy~~~~p~-~L~~~~~~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 400 ALMVATGYNRNAHE-RLLSKVQHLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp EEEECCCEECCTHH-HHTGGGGGGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred EEEECcCCCCCCcc-hhcchhhhcCcCcCCCeeeCCCcEEeecCCccCCCceEEecCCC
Confidence 99999998765422 232222 23677888899877652 23569999944
No 95
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.54 E-value=8.3e-14 Score=135.54 Aligned_cols=94 Identities=19% Similarity=0.121 Sum_probs=71.1
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCC-----------------cccCcc-------cHHH
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD-----------------HILNMF-------DKRI 280 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~-----------------~il~~~-------~~~~ 280 (583)
+|+|||||++|+++|..|++. +.+|+++++.. .++..+ ...+
T Consensus 5 dVvVVGgG~aGl~aA~~la~~--------------g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~ 70 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQK--------------GVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAF 70 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHH
Confidence 899999999999999999885 57999999872 111111 2367
Q ss_pred HHHHHHHHHhC-CCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 281 TAFAEEKFSRD-GIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 281 ~~~~~~~L~~~-GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
.+.+.+.+++. ||+++ +++|+++. ++.+......+|++ +.+|.||+|+|...
T Consensus 71 ~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~--i~a~~VV~A~G~~s 125 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPP--ARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCC--EECSEEEECCTTCS
T ss_pred HHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCE--EECCEEEECCCCCh
Confidence 78888889987 99999 56899885 45543333345754 99999999999743
No 96
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.48 E-value=9.9e-15 Score=157.19 Aligned_cols=257 Identities=16% Similarity=0.159 Sum_probs=143.9
Q ss_pred eEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC----------chh----h------------------------
Q 007975 60 KVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP----------LLP----S------------------------ 101 (583)
Q Consensus 60 ~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p----------~l~----~------------------------ 101 (583)
+|||||||++|+++|..|++.|++|+|||+. ...... +.+ .
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 6999999999999999999889999999998 222210 000 0
Q ss_pred --------h-----c--------cccCCC----------cccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEE---EEe
Q 007975 102 --------V-----T--------CGTVEA----------RSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKV---YCR 147 (583)
Q Consensus 102 --------~-----~--------~g~~~~----------~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v---~~~ 147 (583)
+ . .+...+ ..+...+.+.+++.++++ +...+| .+..+++.+ .+.
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i-~~~~~v-~l~~~~~~v~Gv~v~ 157 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPI-IEDRLV-EIRVKDGKVTGFVTE 157 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCE-ECCCEE-EEEEETTEEEEEEET
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEE-EECcEE-EEEEeCCEEEEEEEE
Confidence 0 0 000000 012333445556677665 346668 887666654 332
Q ss_pred cCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHhccceEE
Q 007975 148 SSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNLSDEERKRILHFV 227 (583)
Q Consensus 148 ~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vv 227 (583)
+.. .++.+|.||+|||..+..+.++.-.. ..+-+ ...+-.+. .+.+.. .+..+...+++
T Consensus 158 ~~~---------g~~~a~~VVlAtGg~~~~~~~~~~~~----~~tGd-gi~~a~~a-----Ga~~~d--~e~~q~~p~~~ 216 (472)
T 2e5v_A 158 KRG---------LVEDVDKLVLATGGYSYLYEYSSTQS----TNIGD-GMAIAFKA-----GTILAD--MEFVQFHPTVT 216 (472)
T ss_dssp TTE---------EECCCSEEEECCCCCGGGSSSBSSCT----TCSCH-HHHHHHHT-----TCCEEC--TTCEEEEEEEE
T ss_pred eCC---------CeEEeeeEEECCCCCcccCccccCCC----CCchH-HHHHHHHc-----CCCEeC--CcceEEEeEEE
Confidence 211 15779999999999876654432111 01111 11110000 000000 00001112445
Q ss_pred EEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHH--------HHHHHHHHHhCCCEEEeCC
Q 007975 228 IVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRI--------TAFAEEKFSRDGIDVKLGS 299 (583)
Q Consensus 228 VVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~--------~~~~~~~L~~~GV~v~~~~ 299 (583)
++|+| +++++..+... +..+ +.+.++++++.+++.. ...+.+.+++.|. ++++.
T Consensus 217 ~~ggg--~~~~ae~~~~~--------------G~~~-v~~~g~rf~~~~~~~~el~~rd~v~~~i~~~~~~~~~-v~ld~ 278 (472)
T 2e5v_A 217 SLDGE--VFLLTETLRGE--------------GAQI-INENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHK-VFIDL 278 (472)
T ss_dssp CGGGC--CEECCTHHHHT--------------TCEE-EETTCCCGGGGTCTTGGGSCHHHHHHHHHHHHHHTCC-EEEEC
T ss_pred ccCCC--ceeeehhhcCC--------------ceEE-ECCCCCCCCccCCcccCcCchhHHHHHHHHHHHhCCc-EEEec
Confidence 56766 77777666543 4455 8889999997665543 6667777777664 33332
Q ss_pred eEEEEeCCeEEEEEcCCCeeEEee-cceEEEccCCCCchhHHHHHHH--hCcCCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 300 MVVKVTDKEIFTKVRGNGETSSMP-YGMVVWSTGIAPHAIIKDFMKQ--VGQTNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 300 ~V~~v~~~~v~~~~~~~G~~~~i~-~D~vI~a~G~~~~p~~~~l~~~--~~~~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
.. +++ + .+ .++ .+.++++.|+.++ .++.- ......|+|.||+++|| +.|+|||+|||+.
T Consensus 279 ~~--~~~----~-----~~--~~~~~~~~~~~~G~dp~----~~i~v~p~~~~~~GGI~vd~~~~t-~ipgLyAaGd~a~ 340 (472)
T 2e5v_A 279 SK--IED----F-----ER--KFPVVAKYLARHGHNYK----VKIPIFPAAHFVDGGIRVNIRGES-NIVNLYAIGEVSD 340 (472)
T ss_dssp TT--CTT----H-----HH--HCHHHHHHHHHTTCCTT----SCEECEEEEEEESCEEECCTTCBC-SSBTEEECGGGEE
T ss_pred cc--hHH----H-----HH--HhHHHHHHHHHhCcCcc----cceEeehhhceeCCCeEECCCCcc-ccCCEEecchhcc
Confidence 10 110 0 01 144 4667777886543 22111 11234689999999999 8999999999987
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.37 E-value=5.8e-15 Score=151.35 Aligned_cols=228 Identities=13% Similarity=0.034 Sum_probs=128.4
Q ss_pred CCeEEEECCcHHHHHHHHhcC--CCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLN--NPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~--~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~ 135 (583)
.+||+|||||||||+||.+|+ +.|++|+|||++++.++....... .++...+......++++.++++..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~---~~~~~~l~~~~~~~~~e~Gv~~~~------ 135 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ---LFSAMVMRKPAHLFLQELEIPYED------ 135 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST---TCCCEEEETTTHHHHHHTTCCCEE------
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc---cCCHHHHHHHHHHHHHHcCCEEEE------
Confidence 468999999999999999996 679999999999888776443321 122233445567778888855421
Q ss_pred EEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCccccCcccCCHHHHHHHHHHHHHHHHHcCCCCC
Q 007975 136 KIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVEENCNFLKEVEDAQRIRRNVIESFEKASLPNL 215 (583)
Q Consensus 136 ~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 215 (583)
.... ....+.++++++..+..+.+||...... .... ++..+
T Consensus 136 ----~~~~-----------------~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~----------~~~~~------ 176 (326)
T 3fpz_A 136 ----EGDY-----------------VVVKHAALFISTVLSKVLQLPNVKLFNA--TCVE----------DLVTR------ 176 (326)
T ss_dssp ----CSSE-----------------EEESCHHHHHHHHHHHHHTSTTEEEETT--EEEE----------EEEEE------
T ss_pred ----CCcc-----------------eecceeEEEEcchhhhccccccceeecc--cccc----------eeecc------
Confidence 1111 2233344555565565566676532110 0000 00000
Q ss_pred CHHHHhccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEE
Q 007975 216 SDEERKRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDV 295 (583)
Q Consensus 216 ~~~~~~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v 295 (583)
.......++++|+|+|.+++|.|..+..+ ..+++++.+......... +... .
T Consensus 177 -~~~~~~~~~v~viggg~~av~~a~~~~~~--------------~~~v~i~~~~~~~~~~~~----------~~~~-~-- 228 (326)
T 3fpz_A 177 -PPTEKGEVTVAGVVTNWTLVTQAHGTQCA--------------MDPNVIELAGYKNDGTRD----------LSQK-H-- 228 (326)
T ss_dssp -SSCSSSSCEEEEEEEEEHHHHTCTTSSSC--------------CCCEEEEESCBCTTSSBC----------TTSC-C--
T ss_pred -CCcccCCCEEEEEccCceeeehhhhhhhc--------------cCcEEEEeeccccccccc----------ceee-c--
Confidence 00012456999999999999988766543 467888877665432211 0000 0
Q ss_pred EeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCCCCccCCCCCEEEcCccc
Q 007975 296 KLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDEWLRVEGSDSIYALGDCA 375 (583)
Q Consensus 296 ~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~~l~~~~~~~VyAiGD~a 375 (583)
..+.+..+....... .+....+.+|.++.+.|..+... .+. .+.|++|..+++ +.|+|||+||++
T Consensus 229 ---~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~--~~~-------e~~iv~~~~~~t-~vpGv~aaGDaa 293 (326)
T 3fpz_A 229 ---GVILSTTGHDGPFGA--FCAKRIVDIDQNQKLGGMKGLDM--NHA-------EHDVVIHSGAYA-GVDNMYFAGMEV 293 (326)
T ss_dssp ---CEEEECCCSCSSSCS--HHHHHHHHHCTTCCCCCCCCBCH--HHH-------HHHHHHHCEECT-TSBTEEECTHHH
T ss_pred ---ceEEEEecceeeEee--cceeEEEecCceeeecceecccc--ccc-------CCeEEECCCeEE-CCCCEEEEchHh
Confidence 111111111100000 01112356677777777544321 121 134677777787 899999999997
Q ss_pred c
Q 007975 376 T 376 (583)
Q Consensus 376 ~ 376 (583)
.
T Consensus 294 ~ 294 (326)
T 3fpz_A 294 A 294 (326)
T ss_dssp H
T ss_pred c
Confidence 5
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.24 E-value=2.1e-12 Score=136.07 Aligned_cols=108 Identities=18% Similarity=0.220 Sum_probs=71.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCC--------CC------chh-hhcc------------------
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF--------TP------LLP-SVTC------------------ 104 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~--------~p------~l~-~~~~------------------ 104 (583)
.++|+|||||++|+++|..|++.|.+|+|||+++..+. .. ..+ .+..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 47999999999999999999999999999999875421 00 000 0000
Q ss_pred -------c---------cC----CCcccchhHHHHHHhCCCcEEEEEeEEEEEecC----CCEEEEecCCCCCCCCCceE
Q 007975 105 -------G---------TV----EARSIVEPVRNIVRKKNVDICFWEAECFKIDAE----NKKVYCRSSQNTNLNGKEEF 160 (583)
Q Consensus 105 -------g---------~~----~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~----~~~v~~~~~~~~~~~~~~~~ 160 (583)
| .+ ...++...+.+.+++.++++. ...+|+.+..+ ...+.+.... +
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~-~~~~v~~i~~~~~g~~~~~~v~~~~-------g-- 153 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKIL-LRSEVSQVERIQNDEKVRFVLQVNS-------T-- 153 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEE-CSCCEEEEEECCSCSSCCEEEEETT-------E--
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEE-eCCEEEEEEcccCcCCCeEEEEECC-------C--
Confidence 0 00 122333446666677776653 46788888755 3445444322 1
Q ss_pred EeecCEEEEccCCCC
Q 007975 161 CMDYDYLVIAMGARA 175 (583)
Q Consensus 161 ~i~yD~LViAtG~~~ 175 (583)
++.+|+||+|+|+.+
T Consensus 154 ~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 154 QWQCKNLIVATGGLS 168 (401)
T ss_dssp EEEESEEEECCCCSS
T ss_pred EEECCEEEECCCCcc
Confidence 689999999999986
No 99
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.00 E-value=1.7e-09 Score=114.64 Aligned_cols=92 Identities=13% Similarity=0.165 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccC--------CCCchhHHHHHHHhCc
Q 007975 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTG--------IAPHAIIKDFMKQVGQ 348 (583)
Q Consensus 279 ~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G--------~~~~p~~~~l~~~~~~ 348 (583)
.+...+.+.+++.| +|+++++|++|+. +++++.. .+|++ +.+|.||+|+| +.++ ......+.++.
T Consensus 205 g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v~v~~-~~g~~--~~ad~vi~a~~~~~l~~i~~~p~-l~~~~~~~~~~ 279 (431)
T 3k7m_X 205 GSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVVNVTV-KDGHA--FQAHSVIVATPMNTWRRIVFTPA-LPERRRSVIEE 279 (431)
T ss_dssp CTHHHHHHHHTTCS-CEESSCCEEEEECSSSSEEEEE-TTSCC--EEEEEEEECSCGGGGGGSEEESC-CCHHHHHHHHH
T ss_pred cHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeEEEEE-CCCCE--EEeCEEEEecCcchHhheeeCCC-CCHHHHHHHHh
Confidence 34455566667778 9999999999963 4577664 45664 99999999999 4332 11111223332
Q ss_pred -CCCcceEeCCCCccCCCCCEEEcCcccc
Q 007975 349 -TNRRALATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 349 -~~~g~i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
.....++|+..+++ ..++||+.||+..
T Consensus 280 ~~~~~~~kv~~~~~~-~~~~i~~~~d~~~ 307 (431)
T 3k7m_X 280 GHGGQGLKILIHVRG-AEAGIECVGDGIF 307 (431)
T ss_dssp CCCCCEEEEEEEEES-CCTTEEEEBSSSS
T ss_pred CCCcceEEEEEEECC-CCcCceEcCCCCE
Confidence 23345999999988 5799999999854
No 100
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.00 E-value=3.2e-09 Score=106.21 Aligned_cols=139 Identities=17% Similarity=0.158 Sum_probs=89.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc----------------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM---------------------------- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~---------------------------- 275 (583)
..|+|||||++|+++|..+++. ++.+|+|+++.+.+...
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~-------------~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 106 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKN-------------PNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAY 106 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-------------TTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCC
T ss_pred cCEEEECccHHHHHHHHHHHHc-------------CCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCc
Confidence 3899999999999999999863 15799999998754210
Q ss_pred ----------ccHHHHHHHHHHHHh-CCCEEEeCCeEEEEe--CCeE---EEEEc----C--C---CeeEEeecceEEEc
Q 007975 276 ----------FDKRITAFAEEKFSR-DGIDVKLGSMVVKVT--DKEI---FTKVR----G--N---GETSSMPYGMVVWS 330 (583)
Q Consensus 276 ----------~~~~~~~~~~~~L~~-~GV~v~~~~~V~~v~--~~~v---~~~~~----~--~---G~~~~i~~D~vI~a 330 (583)
....+...+.+.+.+ .||+++++++|+++. ++.+ ++... . + |+..++++|.||.|
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 107 DEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSS 186 (284)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEEC
T ss_pred ccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEEC
Confidence 124455566666765 699999999999995 3433 33210 0 2 33346999999999
Q ss_pred cCCCCc--hhHHHHHHHhC----cCCCcceEeCC-------CCccCCCCCEEEcCcccc
Q 007975 331 TGIAPH--AIIKDFMKQVG----QTNRRALATDE-------WLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 331 ~G~~~~--p~~~~l~~~~~----~~~~g~i~Vd~-------~l~~~~~~~VyAiGD~a~ 376 (583)
+|..+. ++...++..++ +.....+.++. +.++ ..|++|++||++.
T Consensus 187 tG~~s~~~~~~~~~~~~~g~~~~v~~~~g~~~~~~~~~~v~~~~~-~~p~i~a~G~~~~ 244 (284)
T 1rp0_A 187 CGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTRE-VVPGMIVTGMEVA 244 (284)
T ss_dssp CCSSSTTTTHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHHCEE-EETTEEECTHHHH
T ss_pred CCCchHHHHHHHHHhhhccCCCCcCCcCCchhhhhhHHHhhcccc-ccCCEEEEeeehh
Confidence 995432 22223333322 22222233332 2333 5699999999864
No 101
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.96 E-value=9.1e-10 Score=102.13 Aligned_cols=107 Identities=11% Similarity=0.103 Sum_probs=74.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC-ch---hhhccccCCCcccchhHHHHHHhCCCcEEEEEeE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-LL---PSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p-~l---~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~ 133 (583)
+++|+|||||++|+++|..|++.|.+|+|||+++...... .+ +.. +......++...+.+.+++.++++ +.++
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~gv~v--~~~~ 77 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPNYPGL-LDEPSGEELLRRLEAHARRYGAEV--RPGV 77 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCCSTTC-TTCCCHHHHHHHHHHHHHHTTCEE--EECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhccCCC-cCCCCHHHHHHHHHHHHHHcCCEE--EeCE
Confidence 3689999999999999999999999999999987432210 00 000 011223456677788888888655 4448
Q ss_pred EEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCC
Q 007975 134 CFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARAN 176 (583)
Q Consensus 134 v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~ 176 (583)
|+.++.++..+.+.... + ++.+|+||+|+|..|+
T Consensus 78 v~~i~~~~~~~~v~~~~-------g--~i~ad~vI~A~G~~~~ 111 (180)
T 2ywl_A 78 VKGVRDMGGVFEVETEE-------G--VEKAERLLLCTHKDPT 111 (180)
T ss_dssp CCEEEECSSSEEEECSS-------C--EEEEEEEEECCTTCCH
T ss_pred EEEEEEcCCEEEEEECC-------C--EEEECEEEECCCCCCC
Confidence 99998765544444322 1 7899999999999863
No 102
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.94 E-value=7e-10 Score=107.62 Aligned_cols=118 Identities=16% Similarity=0.209 Sum_probs=76.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhh---cccc----C------CCcccchhHHHHHHhC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSV---TCGT----V------EARSIVEPVRNIVRKK 123 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~---~~g~----~------~~~~i~~~~~~~~~~~ 123 (583)
+.++|+|||||++|+++|..|++.|.+|+|||++......+..+.. ..+. + +...+...+.+.+++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~~ 81 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEGL 81 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHcC
Confidence 3579999999999999999999999999999997322111111100 0000 0 1113444556666665
Q ss_pred -CCcEEEEEeEEEEEecCCCEE-EEecCCCCCCCCCceEEeecCEEEEccCCCCCCCCCCCcc
Q 007975 124 -NVDICFWEAECFKIDAENKKV-YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFNTPGVE 184 (583)
Q Consensus 124 -~i~v~~~~~~v~~id~~~~~v-~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG~~ 184 (583)
+ +++++++|++++.++..+ .+.... + .++.+|+||+|+|...+....+|..
T Consensus 82 ~g--v~i~~~~v~~i~~~~~~v~~v~~~~-----g---~~i~a~~VV~A~G~~s~~~~~~G~~ 134 (232)
T 2cul_A 82 RP--LHLFQATATGLLLEGNRVVGVRTWE-----G---PPARGEKVVLAVGSFLGARLFLGGV 134 (232)
T ss_dssp TT--EEEEECCEEEEEEETTEEEEEEETT-----S---CCEECSEEEECCTTCSSCEEEETTE
T ss_pred CC--cEEEEeEEEEEEEeCCEEEEEEECC-----C---CEEECCEEEECCCCChhhceecCCc
Confidence 6 556678999998766553 222221 1 1689999999999976655555654
No 103
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.80 E-value=6.5e-09 Score=114.16 Aligned_cols=116 Identities=16% Similarity=0.207 Sum_probs=75.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC-CCCCCCchh------------hh--cccc---------------
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN-YFAFTPLLP------------SV--TCGT--------------- 106 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~-~~~~~p~l~------------~~--~~g~--------------- 106 (583)
..++|||||||+||++||..|++.|.+|+|||++. ..+..+..+ ++ ..+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 35799999999999999999999999999999874 222211100 00 0000
Q ss_pred --------------CCCcccchhHHHHHHh-CCCcEEEEEeEEEEEecCCCEE---EEecCCCCCCCCCceEEeecCEEE
Q 007975 107 --------------VEARSIVEPVRNIVRK-KNVDICFWEAECFKIDAENKKV---YCRSSQNTNLNGKEEFCMDYDYLV 168 (583)
Q Consensus 107 --------------~~~~~i~~~~~~~~~~-~~i~v~~~~~~v~~id~~~~~v---~~~~~~~~~~~~~~~~~i~yD~LV 168 (583)
.+...+...+.+.+.+ .+ +++++++|+.+..+++.| .+.++ ..+.+|.||
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~G--V~I~~~~V~~L~~e~g~V~GV~t~dG----------~~I~Ad~VV 174 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPN--LMIFQQAVEDLIVENDRVVGAVTQMG----------LKFRAKAVV 174 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTT--EEEEECCEEEEEESSSBEEEEEETTS----------EEEEEEEEE
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCC--CEEEEEEEEEEEecCCEEEEEEECCC----------CEEECCEEE
Confidence 0001123345556665 46 556789999998765543 33222 279999999
Q ss_pred EccCCCCCCCCCCCcc
Q 007975 169 IAMGARANTFNTPGVE 184 (583)
Q Consensus 169 iAtG~~~~~~~ipG~~ 184 (583)
+|+|+.+..+.++|..
T Consensus 175 LATGt~s~~~~i~G~~ 190 (651)
T 3ces_A 175 LTVGTFLDGKIHIGLD 190 (651)
T ss_dssp ECCSTTTCCEEECC--
T ss_pred EcCCCCccCccccCcc
Confidence 9999988777777753
No 104
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.75 E-value=7.9e-09 Score=111.76 Aligned_cols=53 Identities=15% Similarity=0.076 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccC
Q 007975 278 KRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTG 332 (583)
Q Consensus 278 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G 332 (583)
..+.+.+.+.+++.|++|+++++|++|. +++++...+.+|++ +.+|.||.+++
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~--~~ad~VV~~a~ 275 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRR--FLTQAVASNAD 275 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCE--EECSCEEECCC
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcE--EEcCEEEECCC
Confidence 4678888899999999999999999984 66676555567886 99999999887
No 105
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.69 E-value=2.3e-08 Score=104.20 Aligned_cols=107 Identities=20% Similarity=0.267 Sum_probs=71.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc----h-------------hhhcc-------------c-
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL----L-------------PSVTC-------------G- 105 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~----l-------------~~~~~-------------g- 105 (583)
+.++|+|||||++|+++|..|++.|++|+|||+++.....+. . ..+.. |
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 89 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNK 89 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCc
Confidence 457999999999999999999999999999999876532110 0 00000 0
Q ss_pred -------------cCCCcccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccC
Q 007975 106 -------------TVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMG 172 (583)
Q Consensus 106 -------------~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG 172 (583)
.+....+...+.+.+.+.++++. ...+|+.++.+. .|++.++. ++.+|+||.|+|
T Consensus 90 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~-~~~~v~~i~~~~-~v~~~~g~----------~~~ad~vV~AdG 157 (379)
T 3alj_A 90 SVSKETFNGLPWRIMTRSHLHDALVNRARALGVDIS-VNSEAVAADPVG-RLTLQTGE----------VLEADLIVGADG 157 (379)
T ss_dssp EEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEE-SSCCEEEEETTT-EEEETTSC----------EEECSEEEECCC
T ss_pred eeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEE-eCCEEEEEEeCC-EEEECCCC----------EEEcCEEEECCC
Confidence 00001223345556666775553 366788888744 66665432 799999999999
Q ss_pred CCC
Q 007975 173 ARA 175 (583)
Q Consensus 173 ~~~ 175 (583)
..+
T Consensus 158 ~~s 160 (379)
T 3alj_A 158 VGS 160 (379)
T ss_dssp TTC
T ss_pred ccH
Confidence 865
No 106
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.67 E-value=1.5e-08 Score=106.89 Aligned_cols=110 Identities=19% Similarity=0.216 Sum_probs=73.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC---------------chhhhcc----------------
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP---------------LLPSVTC---------------- 104 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p---------------~l~~~~~---------------- 104 (583)
+..++|+|||||++|+++|..|++.|++|+|||+++..+... ....+..
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 446799999999999999999999999999999987643210 0000000
Q ss_pred ------------------cc----CCCcccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEe
Q 007975 105 ------------------GT----VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCM 162 (583)
Q Consensus 105 ------------------g~----~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i 162 (583)
+. ....++...+.+.+++.++++. .+.+|+.++.++..+.+.... + .+
T Consensus 105 ~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~-~~~~V~~i~~~~~~~~V~~~~-------g--~i 174 (417)
T 3v76_A 105 DFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLR-LETSIGEVERTASGFRVTTSA-------G--TV 174 (417)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEE-CSCCEEEEEEETTEEEEEETT-------E--EE
T ss_pred HHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEE-ECCEEEEEEEeCCEEEEEECC-------c--EE
Confidence 00 0011334445566666776653 467899998777666665432 1 79
Q ss_pred ecCEEEEccCCCC
Q 007975 163 DYDYLVIAMGARA 175 (583)
Q Consensus 163 ~yD~LViAtG~~~ 175 (583)
.+|+||+|+|..+
T Consensus 175 ~ad~VIlAtG~~S 187 (417)
T 3v76_A 175 DAASLVVASGGKS 187 (417)
T ss_dssp EESEEEECCCCSS
T ss_pred EeeEEEECCCCcc
Confidence 9999999999875
No 107
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.66 E-value=2.3e-08 Score=109.35 Aligned_cols=115 Identities=17% Similarity=0.175 Sum_probs=77.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC-CCCCCCchh------------hh--cccc----------------
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN-YFAFTPLLP------------SV--TCGT---------------- 106 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~-~~~~~p~l~------------~~--~~g~---------------- 106 (583)
.++|||||||+||++||..|++.|.+|+|||++. ..+..+..+ ++ ..+.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 5799999999999999999999999999999974 222211100 00 0000
Q ss_pred -------------CCCcccchhHHHHHHh-CCCcEEEEEeEEEEEecCCCE---EEEecCCCCCCCCCceEEeecCEEEE
Q 007975 107 -------------VEARSIVEPVRNIVRK-KNVDICFWEAECFKIDAENKK---VYCRSSQNTNLNGKEEFCMDYDYLVI 169 (583)
Q Consensus 107 -------------~~~~~i~~~~~~~~~~-~~i~v~~~~~~v~~id~~~~~---v~~~~~~~~~~~~~~~~~i~yD~LVi 169 (583)
.+...+...+.+.+.+ .+ +++++++|+.+..+++. |.+.++. .+.+|.||+
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~G--VeI~~~~Vt~L~~e~g~V~GV~t~dG~----------~i~AdaVVL 174 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQEN--LYIKQEEVVDIIVKNNQVVGVRTNLGV----------EYKTKAVVV 174 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTT--EEEEESCEEEEEESSSBEEEEEETTSC----------EEECSEEEE
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCC--CEEEEeEEEEEEecCCEEEEEEECCCc----------EEEeCEEEE
Confidence 0011233345556665 35 55678999999876654 3333321 799999999
Q ss_pred ccCCCCCCCCCCCcc
Q 007975 170 AMGARANTFNTPGVE 184 (583)
Q Consensus 170 AtG~~~~~~~ipG~~ 184 (583)
|||..++.+.++|..
T Consensus 175 ATG~~s~~~~~~G~~ 189 (637)
T 2zxi_A 175 TTGTFLNGVIYIGDK 189 (637)
T ss_dssp CCTTCBTCEEEETTE
T ss_pred ccCCCccCceeccce
Confidence 999988777777754
No 108
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.65 E-value=9.1e-09 Score=111.29 Aligned_cols=153 Identities=11% Similarity=0.118 Sum_probs=99.8
Q ss_pred ecCEEEEccCCCCCCCCCCCcc-ccCcccCCHHHHHHHH-HHHHHHHHHcCCCCCCHHHHhccceEEEEcCChhHHHHHH
Q 007975 163 DYDYLVIAMGARANTFNTPGVE-ENCNFLKEVEDAQRIR-RNVIESFEKASLPNLSDEERKRILHFVIVGGGPTGVEFAA 240 (583)
Q Consensus 163 ~yD~LViAtG~~~~~~~ipG~~-~~~~~~~~~~~a~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~vvVVGgG~tgvE~A~ 240 (583)
.||.+++++|+.+..+++++.+ +..+..+...+..++. .++.. +.. .........+|+|||||++|+.+|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~dVvIVGgG~aGl~aA~ 109 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRASQ--PVY-----QQGQACTNTKCLVVGAGPCGLRAAV 109 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHTS--GGG-----GGGTTTTTCEEEEECCSHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhcc--ccc-----cCccccCCCCEEEECccHHHHHHHH
Confidence 4788999999998766665543 3334444555544331 11100 000 0011123569999999999999999
Q ss_pred HHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-----c----------------------------cHHHHHHHHHH
Q 007975 241 ELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-----F----------------------------DKRITAFAEEK 287 (583)
Q Consensus 241 ~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-----~----------------------------~~~~~~~~~~~ 287 (583)
.|++. +.+|+|+++.+.+... . ...+.+.+.+.
T Consensus 110 ~La~~--------------G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 175 (497)
T 2bry_A 110 ELALL--------------GARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKV 175 (497)
T ss_dssp HHHHT--------------TCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHH
T ss_pred HHHHC--------------CCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHH
Confidence 99875 6899999998754210 0 14566777888
Q ss_pred HHhCCCEEEeCCeEEEEeC-----CeEEEEEc-C-CCeeEEeecceEEEccCCCCc
Q 007975 288 FSRDGIDVKLGSMVVKVTD-----KEIFTKVR-G-NGETSSMPYGMVVWSTGIAPH 336 (583)
Q Consensus 288 L~~~GV~v~~~~~V~~v~~-----~~v~~~~~-~-~G~~~~i~~D~vI~a~G~~~~ 336 (583)
+++.||+++++++|++++. +.+.+... . +|+..++.+|.||.|+|..+.
T Consensus 176 ~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 176 ALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 8889999999999999974 23333221 2 463224999999999996543
No 109
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.63 E-value=6.5e-07 Score=92.09 Aligned_cols=65 Identities=8% Similarity=0.191 Sum_probs=48.3
Q ss_pred cHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--Ce-EEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHh
Q 007975 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE-IFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQV 346 (583)
Q Consensus 277 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~-v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~ 346 (583)
+..+.+.+.+.+++.|++++++++|++++. ++ +.+.. .+|+..++.+|.||+|+|... ..++..+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~-~~g~~~~~~a~~VV~A~G~~s----~~l~~~~ 216 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDF-GGAEPMTLSCRVLINAAGLHA----PGLARRI 216 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEE-CTTSCEEEEEEEEEECCGGGH----HHHHHTE
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEE-CCCceeEEEeCEEEECCCcch----HHHHHHh
Confidence 457888888999999999999999999963 34 55543 456434599999999999533 2455444
No 110
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.62 E-value=9.1e-07 Score=93.26 Aligned_cols=52 Identities=19% Similarity=0.222 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccC
Q 007975 278 KRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTG 332 (583)
Q Consensus 278 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G 332 (583)
..+.+.+.+.++++|++|+++++|++|. +++++.... +|++ +.+|.||+|+|
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~--~~ad~VV~a~~ 249 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRI--HDADLVISNLG 249 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEE--EECSEEEECSC
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEE--EECCEEEECCC
Confidence 5688888999999999999999999995 456652322 3664 99999999998
No 111
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.61 E-value=8.9e-08 Score=95.67 Aligned_cols=119 Identities=17% Similarity=0.174 Sum_probs=70.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC-CCeEEEEcCCCCCCCCCchh-----h---------hc--cccC-----------CC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYFAFTPLLP-----S---------VT--CGTV-----------EA 109 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~-g~~Vtlie~~~~~~~~p~l~-----~---------~~--~g~~-----------~~ 109 (583)
.++|+|||||++|+++|..|++. |.+|+|||+++......... . +. .|.. ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 47999999999999999999986 99999999987653221100 0 00 0000 11
Q ss_pred cccchhHHHHHHh-CCCcEEEEEeEEEEEecCCCEE---EEecC----CCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 110 RSIVEPVRNIVRK-KNVDICFWEAECFKIDAENKKV---YCRSS----QNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 110 ~~i~~~~~~~~~~-~~i~v~~~~~~v~~id~~~~~v---~~~~~----~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
.++...+.+.+.+ .++++ +...+|+.++.+++.+ .+... ...+....+...+.+|.||+|+|..+..
T Consensus 119 ~~~~~~l~~~~~~~~gv~i-~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKL-FNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEE-EETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred HHHHHHHHHHHHhcCCCEE-EcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHH
Confidence 1222233333433 56444 2467899998766643 33210 0000000112479999999999987654
No 112
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.60 E-value=4.6e-08 Score=103.33 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=42.2
Q ss_pred cHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccC
Q 007975 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTG 332 (583)
Q Consensus 277 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G 332 (583)
...+.+.+.+.+++.|++|+++++|++|+. +++ + . .+|++ +.+|.||+|+|
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~-~~g~~--~~ad~Vv~a~~ 240 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-T-RDNEE--YSFDVAISNVG 240 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-E-TTCCE--EECSEEEECSC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-E-eCCcE--EEeCEEEECCC
Confidence 467888889999999999999999999964 456 4 3 34654 99999999999
No 113
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.59 E-value=2.9e-06 Score=88.67 Aligned_cols=68 Identities=13% Similarity=0.081 Sum_probs=47.5
Q ss_pred eEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 262 KITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 262 ~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
.-.++......+. +..+.+.+.+.+++.|++++.+++|++++ ++.+....+.+| + +.+|.||+|+|..
T Consensus 160 ~~~~~~~~~~~~~--~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~--~~a~~vV~a~G~~ 229 (405)
T 2gag_B 160 MGATWQPRAGIAK--HDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-T--IHAGKVALAGAGH 229 (405)
T ss_dssp CEEEEETTCBBCC--HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-C--EEEEEEEECCGGG
T ss_pred eeEEEeCCCccCC--HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-e--EECCEEEECCchh
Confidence 3344444443332 35777888899999999999999999996 344433333456 3 9999999999953
No 114
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.58 E-value=5e-08 Score=105.45 Aligned_cols=120 Identities=16% Similarity=0.190 Sum_probs=77.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCc---hhh---h--ccc------c--------CCCcccc
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPL---LPS---V--TCG------T--------VEARSIV 113 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~---l~~---~--~~g------~--------~~~~~i~ 113 (583)
...++|+|||||++|+++|..|++.|++|+|||+++..+.... .+. . ..| . ....++.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~ 169 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQ 169 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHH
Confidence 3468999999999999999999999999999999876542211 110 0 000 0 0112344
Q ss_pred hhHHHHHHhCCCcEEEEEeEEEEEecC---C--CEEEEecC-CCCCCCCCceEEeecCEEEEccCCCCCCCCCCC
Q 007975 114 EPVRNIVRKKNVDICFWEAECFKIDAE---N--KKVYCRSS-QNTNLNGKEEFCMDYDYLVIAMGARANTFNTPG 182 (583)
Q Consensus 114 ~~~~~~~~~~~i~v~~~~~~v~~id~~---~--~~v~~~~~-~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ipG 182 (583)
..+.+.+.+.++++. ...+|+++..+ . ..|.+... . ++..++.+|+||+|+|..+......+
T Consensus 170 ~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~~~~~~v~~~~~~~------g~~~~i~ad~VV~A~G~~S~~r~~~~ 237 (497)
T 2bry_A 170 LLLLKVALLLGVEIH-WGVKFTGLQPPPRKGSGWRAQLQPNPP------AQLASYEFDVLISAAGGKFVPEGFTI 237 (497)
T ss_dssp HHHHHHHHHTTCEEE-ESCEEEEEECCCSTTCCBEEEEESCCC------HHHHTCCBSEEEECCCTTCCCTTCEE
T ss_pred HHHHHHHHhCCCEEE-eCCEEEEEEEecCCCCEEEEEEEECCC------CCEEEEEcCEEEECCCCCcccccccc
Confidence 455666667786664 47789999763 1 24555321 1 01126899999999999876554444
No 115
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.55 E-value=7.7e-09 Score=114.73 Aligned_cols=39 Identities=23% Similarity=0.349 Sum_probs=34.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~ 95 (583)
..++|||||||++|+++|..|++.|++|+|||+.+..+.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg 83 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSG 83 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCC
Confidence 357999999999999999999999999999999876653
No 116
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.55 E-value=1.7e-06 Score=89.94 Aligned_cols=76 Identities=16% Similarity=0.133 Sum_probs=56.4
Q ss_pred hcCCCC-CCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEE
Q 007975 253 LYPKVK-DSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVW 329 (583)
Q Consensus 253 ~~p~~~-~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~ 329 (583)
.+|.+. ++..+.++...+..+. +..+.+.+.+.+++.|++++.+++|++++. +++.+.. .+| ++.+|.||+
T Consensus 126 ~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~-~~g---~~~a~~vV~ 199 (389)
T 2gf3_A 126 RWPGITVPENYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIET-ANG---SYTADKLIV 199 (389)
T ss_dssp HSTTCCCCTTEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEE-TTE---EEEEEEEEE
T ss_pred hCCCcccCCCceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEe-CCC---EEEeCEEEE
Confidence 355543 4567888887765554 357788888999999999999999999963 4566554 334 399999999
Q ss_pred ccCCC
Q 007975 330 STGIA 334 (583)
Q Consensus 330 a~G~~ 334 (583)
|+|..
T Consensus 200 A~G~~ 204 (389)
T 2gf3_A 200 SMGAW 204 (389)
T ss_dssp CCGGG
T ss_pred ecCcc
Confidence 99953
No 117
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.54 E-value=9.4e-08 Score=103.92 Aligned_cols=110 Identities=16% Similarity=0.233 Sum_probs=72.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCC--------------CCC------------------c-----
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA--------------FTP------------------L----- 98 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~--------------~~p------------------~----- 98 (583)
...++|||||||++|+++|..|++.|++|+|||+.+... ..+ +
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 345799999999999999999999999999999985320 000 0
Q ss_pred h-----hhh-----cccc--------------CCCcccchhHHHHHHhCCCcEEEEEeEEEEEecCCCE---EEEecCCC
Q 007975 99 L-----PSV-----TCGT--------------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK---VYCRSSQN 151 (583)
Q Consensus 99 l-----~~~-----~~g~--------------~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~---v~~~~~~~ 151 (583)
. ..+ ..|. .....+...+.+.+.+.++++. ..++|+.+..++.. |.+.++.
T Consensus 185 ~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~-~~t~V~~I~~~~~~v~gV~l~~G~- 262 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIR-FSTRVDDLHMEDGQITGVTLSNGE- 262 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEE-SSCCEEEEEESSSBEEEEEETTSC-
T ss_pred cccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEE-eCCEEEEEEEeCCEEEEEEECCCC-
Confidence 0 000 0000 0012234456666777786664 47789999877653 3443322
Q ss_pred CCCCCCceEEeecCEEEEccCCCCC
Q 007975 152 TNLNGKEEFCMDYDYLVIAMGARAN 176 (583)
Q Consensus 152 ~~~~~~~~~~i~yD~LViAtG~~~~ 176 (583)
++.+|+||+|+|..+.
T Consensus 263 ---------~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 263 ---------EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp ---------EEECSCEEECCCTTCH
T ss_pred ---------EEECCEEEECCCCChh
Confidence 7999999999999863
No 118
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.48 E-value=6.3e-08 Score=100.65 Aligned_cols=38 Identities=16% Similarity=0.256 Sum_probs=33.9
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 55 ~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
...+++|||||||++|+++|+.|++.|++|+|||++..
T Consensus 14 ~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~ 51 (382)
T 1ryi_A 14 MKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTM 51 (382)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSST
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 34568999999999999999999999999999998753
No 119
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.45 E-value=2e-07 Score=97.62 Aligned_cols=36 Identities=19% Similarity=0.206 Sum_probs=33.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~ 93 (583)
+++|+|||||++|+++|..|++.|++|+|||+++..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 479999999999999999999999999999998654
No 120
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.44 E-value=1.2e-07 Score=98.48 Aligned_cols=39 Identities=18% Similarity=0.266 Sum_probs=35.0
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~ 94 (583)
|+.+||+||||||||+++|..|++.|++|+|||+++.++
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~ 40 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIG 40 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 446899999999999999999999999999999986543
No 121
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.44 E-value=2.3e-07 Score=98.85 Aligned_cols=110 Identities=20% Similarity=0.237 Sum_probs=70.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCC--------C------chhh----hc---------------
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT--------P------LLPS----VT--------------- 103 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~--------p------~l~~----~~--------------- 103 (583)
+.++|+|||||++|+++|..|++.|.+|+|||+.+..+.. . .... +.
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 4579999999999999999999999999999998653210 0 0000 00
Q ss_pred ------------------cccCC-----CcccchhHHHHHHhCCCcEEEEEeEEEEEecCCCE-EEEecCCCCCCCCCce
Q 007975 104 ------------------CGTVE-----ARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK-VYCRSSQNTNLNGKEE 159 (583)
Q Consensus 104 ------------------~g~~~-----~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~-v~~~~~~~~~~~~~~~ 159 (583)
.+..- ...+...+.+.+++.++++. .+.+|+.+..++.. +.+.... +
T Consensus 105 ~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~-~~~~V~~i~~~~~~v~~V~~~~-----G--- 175 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIR-TNTPVETIEYENGQTKAVILQT-----G--- 175 (447)
T ss_dssp HHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEE-CSCCEEEEEEETTEEEEEEETT-----C---
T ss_pred HHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEE-eCcEEEEEEecCCcEEEEEECC-----C---
Confidence 00000 01233345556667776653 47789998765554 3333221 1
Q ss_pred EEeecCEEEEccCCCC
Q 007975 160 FCMDYDYLVIAMGARA 175 (583)
Q Consensus 160 ~~i~yD~LViAtG~~~ 175 (583)
..+.+|.||+|+|..+
T Consensus 176 ~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 176 EVLETNHVVIAVGGKS 191 (447)
T ss_dssp CEEECSCEEECCCCSS
T ss_pred CEEECCEEEECCCCCc
Confidence 1689999999999875
No 122
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.43 E-value=2.1e-07 Score=102.11 Aligned_cols=117 Identities=19% Similarity=0.220 Sum_probs=74.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC-CCCCCCchh------------hh--cccc--------------
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN-YFAFTPLLP------------SV--TCGT-------------- 106 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~-~~~~~p~l~------------~~--~~g~-------------- 106 (583)
...++|+|||||+||++||..|++.|.+|+|||++. ..+..+..+ ++ ..+.
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 345899999999999999999999999999999874 222211100 00 0000
Q ss_pred ---------------CCCcccchhHHHHHHhC-CCcEEEEEeEEEEEecCCCEEE-EecCCCCCCCCCceEEeecCEEEE
Q 007975 107 ---------------VEARSIVEPVRNIVRKK-NVDICFWEAECFKIDAENKKVY-CRSSQNTNLNGKEEFCMDYDYLVI 169 (583)
Q Consensus 107 ---------------~~~~~i~~~~~~~~~~~-~i~v~~~~~~v~~id~~~~~v~-~~~~~~~~~~~~~~~~i~yD~LVi 169 (583)
.+...+...+.+.+.+. + +++++++|+.+..++..|. +.... + ..+.+|.||+
T Consensus 99 l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~G--V~I~~~~V~~L~~d~g~V~GV~t~~-----G---~~i~Ad~VVL 168 (641)
T 3cp8_A 99 LNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPN--IDLLQDTVIGVSANSGKFSSVTVRS-----G---RAIQAKAAIL 168 (641)
T ss_dssp ECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTT--EEEEECCEEEEEEETTEEEEEEETT-----S---CEEEEEEEEE
T ss_pred cccccCccccchhhhcCHHHHHHHHHHHHHhCCC--CEEEeeEEEEEEecCCEEEEEEECC-----C---cEEEeCEEEE
Confidence 00112333455566653 5 5667889999887666543 32221 1 1799999999
Q ss_pred ccCCCCCCCCCCC
Q 007975 170 AMGARANTFNTPG 182 (583)
Q Consensus 170 AtG~~~~~~~ipG 182 (583)
|+|+.++....+|
T Consensus 169 ATG~~s~~~i~~G 181 (641)
T 3cp8_A 169 ACGTFLNGLIHIG 181 (641)
T ss_dssp CCTTCBTCEEEET
T ss_pred CcCCCCCccceee
Confidence 9999876544444
No 123
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.42 E-value=3.7e-06 Score=92.49 Aligned_cols=37 Identities=24% Similarity=0.385 Sum_probs=33.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
|+.++|||||||++|+++|..|++.|++|+|||+.+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 4468999999999999999999999999999999864
No 124
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.42 E-value=2.9e-06 Score=89.87 Aligned_cols=56 Identities=16% Similarity=0.251 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHhCCCEEEeCC---eEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 278 KRITAFAEEKFSRDGIDVKLGS---MVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 278 ~~~~~~~~~~L~~~GV~v~~~~---~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
..+.+.+.+.+++.||+|++++ +|+++. ++.++-..+.+|++ +.+|.||+|+|...
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~--i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKI--WRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEE--EECSEEEECCGGGG
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCE--EECCEEEECCCCCh
Confidence 5677888889999999999999 999985 56666233356754 99999999999543
No 125
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.42 E-value=3e-07 Score=96.56 Aligned_cols=41 Identities=22% Similarity=0.218 Sum_probs=33.6
Q ss_pred CCCCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 007975 53 EMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (583)
Q Consensus 53 ~~~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~ 93 (583)
+...++++|+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 18 ~~~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 18 LYFQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 33455689999999999999999999999999999998653
No 126
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.41 E-value=1.6e-07 Score=97.31 Aligned_cols=37 Identities=24% Similarity=0.161 Sum_probs=32.9
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~ 93 (583)
..+++|+|||||++|+++|+.|+ +|++|+|+|+++..
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~ 43 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQP 43 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSST
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCc
Confidence 34689999999999999999999 69999999998643
No 127
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.39 E-value=4.5e-07 Score=95.47 Aligned_cols=111 Identities=20% Similarity=0.315 Sum_probs=69.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCC---CCchhhh-------------c-cc---------------
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF---TPLLPSV-------------T-CG--------------- 105 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~---~p~l~~~-------------~-~g--------------- 105 (583)
.++|+|||||++|+++|..|++.|++|+|||+++.... ..+.+.. . .+
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 47999999999999999999999999999999863221 1111100 0 00
Q ss_pred -----------------cCCCcccchhHHHHHHhCCCcEEEEEeEEEEEecCCCE--EEEecCCCCCCCCCceEEeecCE
Q 007975 106 -----------------TVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK--VYCRSSQNTNLNGKEEFCMDYDY 166 (583)
Q Consensus 106 -----------------~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~--v~~~~~~~~~~~~~~~~~i~yD~ 166 (583)
.++...+...+.+.+.+.|+++. ...+|++++.+... +.+.... ++..++.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~-~~~~v~~i~~~~~~~~v~v~~~~------g~~~~~~a~~ 157 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVE-YEVGVTDIKFFGTDSVTTIEDIN------GNKREIEARF 157 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEE-CSEEEEEEEEETTEEEEEEEETT------SCEEEEEEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEE-cCCEEEEEEEeCCEEEEEEEcCC------CCEEEEEcCE
Confidence 00001122234455555675553 36689998876543 3443322 1234699999
Q ss_pred EEEccCCCC
Q 007975 167 LVIAMGARA 175 (583)
Q Consensus 167 LViAtG~~~ 175 (583)
||.|+|...
T Consensus 158 vV~A~G~~s 166 (421)
T 3nix_A 158 IIDASGYGR 166 (421)
T ss_dssp EEECCGGGC
T ss_pred EEECCCCch
Confidence 999999764
No 128
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.39 E-value=6.4e-07 Score=97.73 Aligned_cols=36 Identities=28% Similarity=0.320 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
...+|+|||||++|+++|..|++.|++|+|||+++.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 457999999999999999999999999999999864
No 129
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.38 E-value=3.3e-07 Score=93.85 Aligned_cols=36 Identities=17% Similarity=0.219 Sum_probs=32.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCC---CCCeEEEEcCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRNYF 93 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~---~g~~Vtlie~~~~~ 93 (583)
|++|+|||||++|+++|..|++ .|++|+|+|+++..
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 3689999999999999999998 99999999998644
No 130
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.38 E-value=3.5e-07 Score=95.01 Aligned_cols=35 Identities=31% Similarity=0.517 Sum_probs=32.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..++|+|||||++|+++|+.|++.|++|+|||++.
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 35799999999999999999999999999999974
No 131
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.34 E-value=5e-07 Score=91.91 Aligned_cols=36 Identities=22% Similarity=0.303 Sum_probs=33.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~ 93 (583)
+++|+|||||++|+++|..|++.|++|+|||+++..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 469999999999999999999999999999998643
No 132
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.33 E-value=3.4e-07 Score=100.48 Aligned_cols=111 Identities=17% Similarity=0.153 Sum_probs=68.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC-----------------chhhh-----------cccc--
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-----------------LLPSV-----------TCGT-- 106 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p-----------------~l~~~-----------~~g~-- 106 (583)
+.++|+|||||++|+++|..|++.|++|+|||+.+.....+ +...+ ..+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 45799999999999999999999999999999875432110 00000 0000
Q ss_pred --CC---------------CcccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEec--CCCCCCCCCceEEeecCEE
Q 007975 107 --VE---------------ARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRS--SQNTNLNGKEEFCMDYDYL 167 (583)
Q Consensus 107 --~~---------------~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~--~~~~~~~~~~~~~i~yD~L 167 (583)
++ ...+...+.+.+.+.+++++ ...+|+.++.+...+.+.. .. ++.++.+|+|
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~-~~~~v~~l~~~~~~v~v~~~~~~-------G~~~~~a~~v 199 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIP-RGHEVTRLRQDAEAVEVTVAGPS-------GPYPVRARYG 199 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECC-BSCEEEECCBCSSCEEEEEEETT-------EEEEEEESEE
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEE-eCCEEEEEEEcCCeEEEEEEeCC-------CcEEEEeCEE
Confidence 00 01122224455555565543 3678999987766554432 21 1138999999
Q ss_pred EEccCCCC
Q 007975 168 VIAMGARA 175 (583)
Q Consensus 168 ViAtG~~~ 175 (583)
|.|.|...
T Consensus 200 V~ADG~~S 207 (570)
T 3fmw_A 200 VGCDGGRS 207 (570)
T ss_dssp EECSCSSC
T ss_pred EEcCCCCc
Confidence 99999864
No 133
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.33 E-value=7.5e-07 Score=93.27 Aligned_cols=37 Identities=30% Similarity=0.367 Sum_probs=33.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~ 93 (583)
+.++|+|||||++|+++|..|++.|++|+|||+++..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 61 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDR 61 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSST
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCc
Confidence 4579999999999999999999999999999998643
No 134
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.33 E-value=7.2e-07 Score=95.22 Aligned_cols=102 Identities=17% Similarity=0.209 Sum_probs=76.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||++|+.+|..|++.|.+|+||++.+.+. |. ...++...+.+.+++.++++. ...+|+.+
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l--~~---------~~~~~~~~l~~~l~~~Gv~i~-~~~~V~~i 234 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL--PT---------MDLEVSRAAERVFKKQGLTIR-TGVRVTAV 234 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--TT---------SCHHHHHHHHHHHHHHTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc--cc---------cCHHHHHHHHHHHHHCCCEEE-ECCEEEEE
Confidence 5799999999999999999999999999999987532 10 122455566777788886653 46789999
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ 179 (583)
+.+++.+.+....+ .++.+|.||+|+|..|+...
T Consensus 235 ~~~~~~v~v~~~~g--------~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 235 VPEAKGARVELEGG--------EVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp EEETTEEEEEETTS--------CEEEESEEEECSCEEECCTT
T ss_pred EEeCCEEEEEECCC--------eEEEcCEEEECcCCCcCCCC
Confidence 88776665543211 17999999999999987643
No 135
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.33 E-value=9.9e-07 Score=92.33 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=33.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
+.+++|+|||||++|+++|..|++.|++|+|||+++.
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 3457999999999999999999999999999999865
No 136
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.32 E-value=1e-06 Score=98.93 Aligned_cols=36 Identities=17% Similarity=0.293 Sum_probs=32.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
..++|||||||++|+++|..|++.|++|+|||+++.
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~ 306 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADEA 306 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 347999999999999999999999999999999643
No 137
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.32 E-value=4e-07 Score=94.89 Aligned_cols=111 Identities=16% Similarity=0.177 Sum_probs=70.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC---------chhhh-c-------------------cccC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP---------LLPSV-T-------------------CGTV 107 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p---------~l~~~-~-------------------~g~~ 107 (583)
++++|+|||||++|+++|..|++.|++|+|||+++..+... .+... . .+..
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCE
Confidence 35799999999999999999999999999999987543210 00000 0 0000
Q ss_pred --C--C-------------cccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEE---EecCCCCCCCCCceEEeecCEE
Q 007975 108 --E--A-------------RSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVY---CRSSQNTNLNGKEEFCMDYDYL 167 (583)
Q Consensus 108 --~--~-------------~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~---~~~~~~~~~~~~~~~~i~yD~L 167 (583)
. . ..+...+.+.+.+.|+++. ..++|+++..++..+. +.... +..++.+|.|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~-~~~~v~~i~~~~~~v~gv~~~~~~-------~~~~~~a~~v 154 (397)
T 3cgv_A 83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVW-VKSPALGVIKENGKVAGAKIRHNN-------EIVDVRAKMV 154 (397)
T ss_dssp CEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEE-SSCCEEEEEEETTEEEEEEEEETT-------EEEEEEEEEE
T ss_pred EEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEE-ECCEEEEEEEeCCEEEEEEEEECC-------eEEEEEcCEE
Confidence 0 0 0111224444555675553 4678999887766543 33211 1248999999
Q ss_pred EEccCCCC
Q 007975 168 VIAMGARA 175 (583)
Q Consensus 168 ViAtG~~~ 175 (583)
|.|+|...
T Consensus 155 V~A~G~~s 162 (397)
T 3cgv_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EECCCcch
Confidence 99999764
No 138
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.31 E-value=1.1e-06 Score=95.17 Aligned_cols=113 Identities=20% Similarity=0.293 Sum_probs=72.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCC---Cchhh--------------hcc-c------------c
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT---PLLPS--------------VTC-G------------T 106 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~---p~l~~--------------~~~-g------------~ 106 (583)
..++|+|||||++|+++|..|++.|++|+|||+.+..... .+.+. +.. + .
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~ 85 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGK 85 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecC
Confidence 3479999999999999999999999999999998632211 11110 000 0 0
Q ss_pred ----------------------CCCcccchhHHHHHHhCCCcEEEEEeEEEEEecCCCE---EEEecCCCCCCCCCceEE
Q 007975 107 ----------------------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKK---VYCRSSQNTNLNGKEEFC 161 (583)
Q Consensus 107 ----------------------~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~---v~~~~~~~~~~~~~~~~~ 161 (583)
++...+...+.+.+.+.|+++. ...+|+.+..++.. |.+.... ++..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~-~~~~V~~v~~~~~~v~gv~~~~~d------G~~~~ 158 (512)
T 3e1t_A 86 EPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVR-ERHEVIDVLFEGERAVGVRYRNTE------GVELM 158 (512)
T ss_dssp CSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEE-SSCEEEEEEEETTEEEEEEEECSS------SCEEE
T ss_pred CccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEE-cCCEEEEEEEECCEEEEEEEEeCC------CCEEE
Confidence 0000122234555666775553 46689999887764 4444322 12248
Q ss_pred eecCEEEEccCCCCC
Q 007975 162 MDYDYLVIAMGARAN 176 (583)
Q Consensus 162 i~yD~LViAtG~~~~ 176 (583)
+.+|.||.|+|....
T Consensus 159 i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 159 AHARFIVDASGNRTR 173 (512)
T ss_dssp EEEEEEEECCCTTCS
T ss_pred EEcCEEEECCCcchH
Confidence 999999999998753
No 139
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.29 E-value=1.2e-05 Score=90.47 Aligned_cols=57 Identities=12% Similarity=0.137 Sum_probs=44.3
Q ss_pred cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCe-eEEeecceEEEccCCCCc
Q 007975 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGE-TSSMPYGMVVWSTGIAPH 336 (583)
Q Consensus 277 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~-~~~i~~D~vI~a~G~~~~ 336 (583)
+..+.+.+.+.+++.|++|+++++|+++. ++++.+.. .+|+ . +.+|.||+|+|....
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t-~~G~~~--i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTF-GQSQAA--KHHATVILATGHRLP 470 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEE-C-CCCC--EEESEEEECCGGGTT
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEe-CCCcEE--EECCEEEECCCcchh
Confidence 35778888889999999999999999985 44565554 3454 4 899999999996543
No 140
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.29 E-value=6.4e-06 Score=90.22 Aligned_cols=57 Identities=19% Similarity=0.061 Sum_probs=44.3
Q ss_pred cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCe---EEEEEcCCCeeEEeecceEEEccCC
Q 007975 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKE---IFTKVRGNGETSSMPYGMVVWSTGI 333 (583)
Q Consensus 277 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vI~a~G~ 333 (583)
+..+...+.+.+++.|++++++++|+++. +++ |++.+..+|+..++.+|.||.|+|.
T Consensus 169 ~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ 230 (561)
T 3da1_A 169 DARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGP 230 (561)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCc
Confidence 35777788888899999999999999985 344 4455434565556999999999994
No 141
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.28 E-value=1.4e-06 Score=91.61 Aligned_cols=97 Identities=14% Similarity=0.254 Sum_probs=75.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.-. ....++...+.+.+++.|+++. ...+|+.+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 213 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR----------AAPATLADFVARYHAAQGVDLR-FERSVTGS 213 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TSCHHHHHHHHHHHHHTTCEEE-ESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc----------ccCHHHHHHHHHHHHHcCcEEE-eCCEEEEE
Confidence 579999999999999999999999999999998753211 0122455667788888886663 46688999
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+ ++ .|.+.++. ++.+|.||+|+|..|+.
T Consensus 214 ~-~~-~v~~~~g~----------~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 214 V-DG-VVLLDDGT----------RIAADMVVVGIGVLAND 241 (408)
T ss_dssp E-TT-EEEETTSC----------EEECSEEEECSCEEECC
T ss_pred E-CC-EEEECCCC----------EEEcCEEEECcCCCccH
Confidence 8 43 77775442 89999999999998864
No 142
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.28 E-value=3.3e-07 Score=94.81 Aligned_cols=35 Identities=14% Similarity=0.225 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
..+|+|||||++|+++|+.|++.|++|+|||++..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 46999999999999999999999999999998754
No 143
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.28 E-value=1.7e-06 Score=93.57 Aligned_cols=115 Identities=19% Similarity=0.202 Sum_probs=72.6
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC-----------------chhhhcc----------c--
Q 007975 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-----------------LLPSVTC----------G-- 105 (583)
Q Consensus 55 ~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p-----------------~l~~~~~----------g-- 105 (583)
..++++|+|||||++|+++|..|++.|++|+|||+.+.....+ +...+.. +
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLP 87 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccccee
Confidence 3456899999999999999999999999999999886542211 0001100 0
Q ss_pred ----cCC---C-------cccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEcc
Q 007975 106 ----TVE---A-------RSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAM 171 (583)
Q Consensus 106 ----~~~---~-------~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAt 171 (583)
... + ..+..-+.+.+.+.+++++ ...+|++++.+...|++.... +.+..++.+|+||.|.
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~v~v~~~~-----~~g~~~~~a~~vVgAD 161 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIR-RGHEVLSLTDDGAGVTVEVRG-----PEGKHTLRAAYLVGCD 161 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEE-ETCEEEEEEEETTEEEEEEEE-----TTEEEEEEESEEEECC
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEE-CCcEEEEEEEcCCeEEEEEEc-----CCCCEEEEeCEEEECC
Confidence 000 0 0111223444556676664 478899998776655543221 1113479999999999
Q ss_pred CCCC
Q 007975 172 GARA 175 (583)
Q Consensus 172 G~~~ 175 (583)
|...
T Consensus 162 G~~S 165 (500)
T 2qa1_A 162 GGRS 165 (500)
T ss_dssp CTTC
T ss_pred Ccch
Confidence 9864
No 144
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.28 E-value=1.3e-06 Score=95.93 Aligned_cols=37 Identities=27% Similarity=0.301 Sum_probs=34.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~ 94 (583)
..+|||||||++|+++|..|++.|++|+|||+.+..+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~g 162 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIG 162 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 5799999999999999999999999999999987654
No 145
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.27 E-value=1.6e-06 Score=92.70 Aligned_cols=105 Identities=14% Similarity=0.190 Sum_probs=76.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+||++.+.+.-. ...++...+.+.+++.|+++. ...+|+.+
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~gV~i~-~~~~v~~i 236 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ-----------GDPETAALLRRALEKEGIRVR-TKTKAVGY 236 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------SCHHHHHHHHHHHHHTTCEEE-CSEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----------cCHHHHHHHHHHHHhcCCEEE-cCCEEEEE
Confidence 479999999999999999999999999999998753210 123455667788888886653 46789999
Q ss_pred ecCCCEE--EEecCCCCCCCCCceEEeecCEEEEccCCCCCCCC
Q 007975 138 DAENKKV--YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (583)
Q Consensus 138 d~~~~~v--~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ 179 (583)
+.+++.+ .+.... .++..++.+|.||+|+|..|+...
T Consensus 237 ~~~~~~~~v~~~~~~-----~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 237 EKKKDGLHVRLEPAE-----GGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EEETTEEEEEEEETT-----CCSCEEEEESEEEECSCEEESCTT
T ss_pred EEeCCEEEEEEeecC-----CCceeEEEcCEEEECCCcccCCCC
Confidence 8766544 333110 011237899999999999987643
No 146
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.27 E-value=9.7e-07 Score=94.17 Aligned_cols=112 Identities=20% Similarity=0.236 Sum_probs=70.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCC--CCCc--------hhhhcc-------------c--------c
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA--FTPL--------LPSVTC-------------G--------T 106 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~--~~p~--------l~~~~~-------------g--------~ 106 (583)
..+|+|||||++|+++|..|++.|++|+|||+.+... ..+. +..... + .
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 4799999999999999999999999999999986421 1100 000000 0 0
Q ss_pred -----------CCCcccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEE---EEecC-CCCCCCCCceEEeecCEEEEcc
Q 007975 107 -----------VEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKV---YCRSS-QNTNLNGKEEFCMDYDYLVIAM 171 (583)
Q Consensus 107 -----------~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v---~~~~~-~~~~~~~~~~~~i~yD~LViAt 171 (583)
++...+...+.+.+.+.|+++. ...+|++++.++..+ .+.+. . ++..++.+|.||.|+
T Consensus 86 ~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~-~~~~v~~i~~~~~~v~gv~~~~~~~------G~~~~~~ad~VV~Ad 158 (453)
T 3atr_A 86 TVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIW-DLTTAMKPIFEDGYVKGAVLFNRRT------NEELTVYSKVVVEAT 158 (453)
T ss_dssp CEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEE-SSEEEEEEEEETTEEEEEEEEETTT------TEEEEEECSEEEECC
T ss_pred eEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEE-eCcEEEEEEEECCEEEEEEEEEcCC------CceEEEEcCEEEECc
Confidence 0000122223444555676653 467888988776653 44421 1 112478999999999
Q ss_pred CCCCC
Q 007975 172 GARAN 176 (583)
Q Consensus 172 G~~~~ 176 (583)
|....
T Consensus 159 G~~s~ 163 (453)
T 3atr_A 159 GYSRS 163 (453)
T ss_dssp GGGCT
T ss_pred CCchh
Confidence 98654
No 147
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.26 E-value=2e-06 Score=89.52 Aligned_cols=101 Identities=21% Similarity=0.326 Sum_probs=75.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|.+.|.+|+|+++.+.+... ..+.++...+.+.+++.|+++. ...+|+.+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------~~~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 213 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------LLHPAAAKAVQAGLEGLGVRFH-LGPVLASL 213 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------TSCHHHHHHHHHHHHTTTCEEE-ESCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc----------ccCHHHHHHHHHHHHHcCCEEE-eCCEEEEE
Confidence 689999999999999999999999999999998753211 1123456677788888886653 46678888
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+.+++.+.+.... + .++.+|.||+|+|..|+.
T Consensus 214 ~~~~~~~~v~~~~-----g---~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 214 KKAGEGLEAHLSD-----G---EVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EEETTEEEEEETT-----S---CEEEESEEEECSCEEECC
T ss_pred EecCCEEEEEECC-----C---CEEECCEEEECcCCCcCH
Confidence 8765544433222 1 179999999999998865
No 148
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.25 E-value=4.8e-06 Score=84.99 Aligned_cols=96 Identities=18% Similarity=0.206 Sum_probs=75.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc---------------------Ccc------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------------NMF------ 276 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il---------------------~~~------ 276 (583)
.+|+|||||+.|+.+|..|++. +.+|+++++.+.+. +.+
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~--------------g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRS--------------GLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQ 69 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS--------------SCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCc
Confidence 3899999999999999999874 57999999886531 111
Q ss_pred -----cHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEE-EEEcCCCeeEEeecceEEEccCCCCch
Q 007975 277 -----DKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIF-TKVRGNGETSSMPYGMVVWSTGIAPHA 337 (583)
Q Consensus 277 -----~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~-~~~~~~G~~~~i~~D~vI~a~G~~~~p 337 (583)
...+.+++.+.+++.|++++++++|++++. +.+. +. +.+| ++.+|.||+|+|....|
T Consensus 70 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~-~~~g---~~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 70 GPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVA-RDGR---QWLARAVISATGTWGEA 134 (357)
T ss_dssp SSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEE-TTSC---EEEEEEEEECCCSGGGB
T ss_pred cCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEE-eCCC---EEEeCEEEECCCCCCCC
Confidence 157888888999999999999999999863 4555 44 3445 39999999999964443
No 149
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.24 E-value=8.8e-07 Score=92.56 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
..+|||||||++|+++|+.|++.|++|+|||+.+.
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 46999999999999999999999999999998754
No 150
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=2.3e-06 Score=91.34 Aligned_cols=104 Identities=20% Similarity=0.304 Sum_probs=75.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +. ...++...+.+.+++.|+++. ...+|+.+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-----~~------~~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 237 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-----SG------FEKQMAAIIKKRLKKKGVEVV-TNALAKGA 237 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-----TT------SCHHHHHHHHHHHHHTTCEEE-ESEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-----cc------cCHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 5799999999999999999999999999999986532 10 122455667778888886663 46789999
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.+...+.+.... +++..++.+|.+|+|+|..|+..
T Consensus 238 ~~~~~~~~v~~~~-----~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 238 EEREDGVTVTYEA-----NGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp EEETTEEEEEEEE-----TTEEEEEEESEEEECSCEEESCS
T ss_pred EEeCCeEEEEEEe-----CCceeEEEcCEEEECcCCCcccC
Confidence 8766544332110 00123799999999999998764
No 151
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.22 E-value=1.8e-06 Score=91.99 Aligned_cols=100 Identities=20% Similarity=0.282 Sum_probs=74.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~ 136 (583)
..++|+|||||++|+.+|..|++.|.+|+|+|+.+.+... ....++...+.+.+++.|+++. ...+|+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~gv~i~-~~~~v~~ 216 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV----------YLDKEFTDVLTEEMEANNITIA-TGETVER 216 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TCCHHHHHHHHHHHHTTTEEEE-ESCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc----------cCCHHHHHHHHHHHHhCCCEEE-cCCEEEE
Confidence 4689999999999999999999999999999998753211 0123456677788888885542 3568899
Q ss_pred EecCCCE--EEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 137 IDAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 137 id~~~~~--v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
++.+++. +.+ ++ .++.+|.||+|+|..|+..
T Consensus 217 i~~~~~v~~v~~-~~----------~~i~~d~vi~a~G~~p~~~ 249 (447)
T 1nhp_A 217 YEGDGRVQKVVT-DK----------NAYDADLVVVAVGVRPNTA 249 (447)
T ss_dssp EECSSBCCEEEE-SS----------CEEECSEEEECSCEEESCG
T ss_pred EEccCcEEEEEE-CC----------CEEECCEEEECcCCCCChH
Confidence 9876432 333 21 1799999999999998754
No 152
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.22 E-value=2.5e-06 Score=92.09 Aligned_cols=113 Identities=18% Similarity=0.200 Sum_probs=71.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC-----------------chhhhcc----------c----
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP-----------------LLPSVTC----------G---- 105 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p-----------------~l~~~~~----------g---- 105 (583)
..++|+|||||++|+++|..|++.|++|+|||+.+.....+ +...+.. +
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 46799999999999999999999999999999976543211 0000000 0
Q ss_pred --cCC---C-------cccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCC
Q 007975 106 --TVE---A-------RSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGA 173 (583)
Q Consensus 106 --~~~---~-------~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~ 173 (583)
... + ..+..-+.+.+.+.+++++ ...+|++++.+...|++.... +.+..++.+|+||.|.|.
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~-~~~~v~~i~~~~~~v~v~~~~-----~~g~~~~~a~~vVgADG~ 164 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELL-RGHTVRALTDEGDHVVVEVEG-----PDGPRSLTTRYVVGCDGG 164 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEE-ESCEEEEEEECSSCEEEEEEC-----SSCEEEEEEEEEEECCCT
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEE-cCCEEEEEEEeCCEEEEEEEc-----CCCcEEEEeCEEEEccCc
Confidence 000 0 0111223444556676664 377899998766644443221 111347999999999998
Q ss_pred CC
Q 007975 174 RA 175 (583)
Q Consensus 174 ~~ 175 (583)
..
T Consensus 165 ~S 166 (499)
T 2qa2_A 165 RS 166 (499)
T ss_dssp TC
T ss_pred cc
Confidence 64
No 153
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.21 E-value=8e-06 Score=93.81 Aligned_cols=55 Identities=15% Similarity=0.237 Sum_probs=43.0
Q ss_pred cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 277 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
+..+...+.+.++++|++++.+++|++++ ++.+....+.+| ++.+|.||+|+|..
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G---~i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG---VIPADIVVSCAGFW 206 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE---EEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc---EEECCEEEECCccc
Confidence 45778888899999999999999999996 455543333445 29999999999953
No 154
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.21 E-value=9.6e-07 Score=92.17 Aligned_cols=35 Identities=20% Similarity=0.330 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
.++|+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46999999999999999999999999999998863
No 155
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.19 E-value=6.3e-07 Score=86.98 Aligned_cols=39 Identities=21% Similarity=0.238 Sum_probs=35.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~ 96 (583)
..+|+|||||||||+||..|++.|++|+|||+++..++.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~ 40 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 468999999999999999999999999999999876543
No 156
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.19 E-value=1.8e-06 Score=94.90 Aligned_cols=38 Identities=18% Similarity=0.294 Sum_probs=34.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~ 94 (583)
...+|||||||++|+++|..|++.|++|+|||+.+...
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~g 157 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSG 157 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 34689999999999999999999999999999987554
No 157
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.19 E-value=3.7e-06 Score=88.52 Aligned_cols=99 Identities=18% Similarity=0.227 Sum_probs=76.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... .....+...+.+.+++.|+++. ...+|+.+
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 220 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR----------VAGEALSEFYQAEHRAHGVDLR-TGAAMDCI 220 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TSCHHHHHHHHHHHHHTTCEEE-ETCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh----------hcCHHHHHHHHHHHHhCCCEEE-ECCEEEEE
Confidence 679999999999999999999999999999998764221 1123456667788888886663 47789999
Q ss_pred ecCCC---EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+.++. .|.+.++. ++.+|.+|+|+|..|+.
T Consensus 221 ~~~~~~v~~v~l~dG~----------~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 221 EGDGTKVTGVRMQDGS----------VIPADIVIVGIGIVPCV 253 (415)
T ss_dssp EESSSBEEEEEESSSC----------EEECSEEEECSCCEESC
T ss_pred EecCCcEEEEEeCCCC----------EEEcCEEEECCCCccCh
Confidence 87654 34554432 89999999999998875
No 158
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=1.5e-06 Score=92.91 Aligned_cols=102 Identities=18% Similarity=0.323 Sum_probs=75.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. |. ...++...+.+.+++.|+++. ...+|+.+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l--~~---------~~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 238 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL--PT---------YDSELTAPVAESLKKLGIALH-LGHSVEGY 238 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHHTCEEE-TTCEEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHCCCEEE-ECCEEEEE
Confidence 5799999999999999999998999999999987632 11 122445566777788886653 36789999
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ 179 (583)
+. ++ +.+.... + +..++.+|.||+|+|.+|+...
T Consensus 239 ~~-~~-v~v~~~~-----G-~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 239 EN-GC-LLANDGK-----G-GQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp ET-TE-EEEECSS-----S-CCCEECCSCEEECCCEEECCSS
T ss_pred Ee-CC-EEEEECC-----C-ceEEEECCEEEECcCCCcCCCC
Confidence 87 44 6555211 1 1137999999999999987653
No 159
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.19 E-value=1.4e-05 Score=82.85 Aligned_cols=93 Identities=17% Similarity=0.235 Sum_probs=72.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC-----------------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------------------------- 274 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~----------------------------- 274 (583)
.+|+|||||++|+.+|..|++. +.+|+|+|+.+.+..
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~--------------G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 77 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQN--------------GWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSH 77 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCB
T ss_pred CeEEEECCCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCC
Confidence 4899999999999999999875 578999988765421
Q ss_pred ---------------cc-----------cHHHHHHHHHHHHhCCCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEE
Q 007975 275 ---------------MF-----------DKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVV 328 (583)
Q Consensus 275 ---------------~~-----------~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI 328 (583)
.+ ...+.+.+.+.+++.||+++.+++|++++.++ .+.. .+|++ +.+|.||
T Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~-~v~~-~~g~~--~~ad~vV 153 (379)
T 3alj_A 78 TPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVG-RLTL-QTGEV--LEADLIV 153 (379)
T ss_dssp CCSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTT-EEEE-TTSCE--EECSEEE
T ss_pred CccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCC-EEEE-CCCCE--EEcCEEE
Confidence 00 14556777888888999999999999997654 4443 45764 9999999
Q ss_pred EccCCC
Q 007975 329 WSTGIA 334 (583)
Q Consensus 329 ~a~G~~ 334 (583)
.|.|..
T Consensus 154 ~AdG~~ 159 (379)
T 3alj_A 154 GADGVG 159 (379)
T ss_dssp ECCCTT
T ss_pred ECCCcc
Confidence 999943
No 160
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.18 E-value=8.7e-06 Score=88.44 Aligned_cols=108 Identities=18% Similarity=0.266 Sum_probs=78.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc-------------------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI------------------------------- 272 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i------------------------------- 272 (583)
.+|+|||||++|+.+|..|++. +.+|+|+++.+.+
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~--------------G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~ 173 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQM--------------GFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGT 173 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHT--------------TCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCeEEEEEccCcccccccchhcccccccccccccceeccCCccc
Confidence 4899999999999999999874 6789999987532
Q ss_pred -----c------Ccc------------------------------cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeE
Q 007975 273 -----L------NMF------------------------------DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEI 309 (583)
Q Consensus 273 -----l------~~~------------------------------~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v 309 (583)
+ +.+ ...+.+.+.+.+++.||+|+++++|+++. ++.+
T Consensus 174 ~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v 253 (549)
T 3nlc_A 174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQI 253 (549)
T ss_dssp TSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBE
T ss_pred ccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEE
Confidence 0 000 14566677788888999999999999985 3445
Q ss_pred EEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCc
Q 007975 310 FTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQ 348 (583)
Q Consensus 310 ~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~ 348 (583)
....+.+|++ +.+|.||+|+|..+.... .++...++
T Consensus 254 ~gV~l~~G~~--i~Ad~VVlA~G~~s~~~~-~~l~~~Gi 289 (549)
T 3nlc_A 254 TGVTLSNGEE--IKSRHVVLAVGHSARDTF-EMLHERGV 289 (549)
T ss_dssp EEEEETTSCE--EECSCEEECCCTTCHHHH-HHHHHTTC
T ss_pred EEEEECCCCE--EECCEEEECCCCChhhHH-HHHHHcCC
Confidence 5333456765 999999999997554333 24555554
No 161
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.17 E-value=6.3e-06 Score=83.31 Aligned_cols=92 Identities=15% Similarity=0.142 Sum_probs=72.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc---------------Cc----ccHHHHHHH
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------NM----FDKRITAFA 284 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il---------------~~----~~~~~~~~~ 284 (583)
.+|+|||||+.|+.+|..|++. +.+|+|+++.+.+. +. ...++..++
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMR--------------QASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNL 73 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHC--------------CCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHH
Confidence 5899999999999999999874 57999999987432 11 136778888
Q ss_pred HHHHHhCCCEEEeCCeEEEEeCC---eEEEEEcCCCeeEEeecceEEEccCC
Q 007975 285 EEKFSRDGIDVKLGSMVVKVTDK---EIFTKVRGNGETSSMPYGMVVWSTGI 333 (583)
Q Consensus 285 ~~~L~~~GV~v~~~~~V~~v~~~---~v~~~~~~~G~~~~i~~D~vI~a~G~ 333 (583)
.+.+++.|++++++++|++++.+ .+.+.. .+|+ +.+|.||+|+|.
T Consensus 74 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~-~~g~---~~~d~vVlAtG~ 121 (332)
T 3lzw_A 74 KEQMAKFDQTICLEQAVESVEKQADGVFKLVT-NEET---HYSKTVIITAGN 121 (332)
T ss_dssp HHHHTTSCCEEECSCCEEEEEECTTSCEEEEE-SSEE---EEEEEEEECCTT
T ss_pred HHHHHHhCCcEEccCEEEEEEECCCCcEEEEE-CCCE---EEeCEEEECCCC
Confidence 88899999999999999999643 344443 3343 899999999996
No 162
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.16 E-value=1.8e-06 Score=90.85 Aligned_cols=99 Identities=15% Similarity=0.261 Sum_probs=75.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +.. ...++...+.+.+++.|+++. ...+|..+
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l-----~~~-----~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 211 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL-----VRV-----LGRRIGAWLRGLLTELGVQVE-LGTGVVGF 211 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----HHH-----HCHHHHHHHHHHHHHHTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-----hhh-----cCHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 5799999999999999999999999999999987532 110 112455667778888886653 37788899
Q ss_pred ecCCC--EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~~~~--~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+.+++ .|.+.++. ++++|.||+|+|..|+.
T Consensus 212 ~~~~~~~~v~~~dg~----------~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 212 SGEGQLEQVMASDGR----------SFVADSALICVGAEPAD 243 (410)
T ss_dssp ECSSSCCEEEETTSC----------EEECSEEEECSCEEECC
T ss_pred eccCcEEEEEECCCC----------EEEcCEEEEeeCCeecH
Confidence 87654 46665443 89999999999998864
No 163
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.16 E-value=4.3e-06 Score=88.72 Aligned_cols=97 Identities=19% Similarity=0.357 Sum_probs=77.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|||+++.+.+. + ....++...+.+.+++.++++. ...+|+.+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll-----~------~~d~~~~~~~~~~l~~~gV~i~-~~~~v~~~ 214 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKIN-----K------LMDADMNQPILDELDKREIPYR-LNEEINAI 214 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCS-----T------TSCGGGGHHHHHHHHHTTCCEE-ESCCEEEE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccc-----c------cccchhHHHHHHHhhccceEEE-eccEEEEe
Confidence 5689999999999999999999999999999887532 1 1123567778888999998874 57788888
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+. ..+.++++. .+++|.+++|+|..|+..
T Consensus 215 ~~--~~v~~~~g~----------~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 215 NG--NEITFKSGK----------VEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp ET--TEEEETTSC----------EEECSEEEECCCEEESCG
T ss_pred cC--CeeeecCCe----------EEeeeeEEEEeceecCcH
Confidence 74 467776554 899999999999998753
No 164
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.14 E-value=3e-06 Score=90.31 Aligned_cols=99 Identities=15% Similarity=0.168 Sum_probs=74.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+... +. ...++...+.+.+++.|+++. ...+|+.+
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-----~~------~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~i 234 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-----PS------FDPMISETLVEVMNAEGPQLH-TNAIPKAV 234 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----TT------SCHHHHHHHHHHHHHHSCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-----hh------hhHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 5799999999999999999999999999999886532 10 112455667777888886653 36688888
Q ss_pred ecCC-C--EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~-~--~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.+. + .|.+.++. ++.+|.||+|+|..|+..
T Consensus 235 ~~~~~~~~~v~~~~g~----------~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 235 VKNTDGSLTLELEDGR----------SETVDCLIWAIGREPAND 268 (450)
T ss_dssp EECTTSCEEEEETTSC----------EEEESEEEECSCEEESCT
T ss_pred EEeCCcEEEEEECCCc----------EEEcCEEEECCCCCcCCC
Confidence 8653 2 45544332 799999999999998764
No 165
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.14 E-value=1.1e-05 Score=81.01 Aligned_cols=94 Identities=16% Similarity=0.248 Sum_probs=72.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecC--Ccc--------cCc----ccHHHHHHHHHHHH
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA--DHI--------LNM----FDKRITAFAEEKFS 289 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~--~~i--------l~~----~~~~~~~~~~~~L~ 289 (583)
.+|+|||||+.|+.+|..|++. +.+|+|+++. ..+ .|. ...++.+++.+.++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARY--------------MLKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIE 81 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHH
T ss_pred cCEEEECccHHHHHHHHHHHHC--------------CCcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 5899999999999999999875 5789999985 111 122 23577888888899
Q ss_pred hCCCEEEeCCeEEEEeCC--eEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 290 RDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 290 ~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
+.|++++. ++|++++.+ .+.+.. .+|+. +.+|.+|+|+|..+
T Consensus 82 ~~~v~~~~-~~v~~i~~~~~~~~v~~-~~g~~--~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 82 KYEVPVLL-DIVEKIENRGDEFVVKT-KRKGE--FKADSVILGIGVKR 125 (323)
T ss_dssp TTTCCEEE-SCEEEEEEC--CEEEEE-SSSCE--EEEEEEEECCCCEE
T ss_pred HcCCEEEE-EEEEEEEecCCEEEEEE-CCCCE--EEcCEEEECcCCCC
Confidence 99999999 899998754 455544 34554 99999999999653
No 166
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.13 E-value=3.6e-06 Score=89.45 Aligned_cols=35 Identities=26% Similarity=0.222 Sum_probs=32.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC-CeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g-~~Vtlie~~~ 91 (583)
..++|||||||++|+++|+.|++.| ++|+|||++.
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~ 57 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGH 57 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCC
Confidence 4579999999999999999999888 9999999943
No 167
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.13 E-value=1e-05 Score=81.96 Aligned_cols=98 Identities=19% Similarity=0.211 Sum_probs=74.5
Q ss_pred hccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCC----cc------------cCcc-----cHH
Q 007975 221 KRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD----HI------------LNMF-----DKR 279 (583)
Q Consensus 221 ~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~----~i------------l~~~-----~~~ 279 (583)
...++|+|||||+.|+.+|..|++. +.+|+|+++.+ .+ .|.+ ..+
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 85 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARA--------------EIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSE 85 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHT--------------TCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHH
Confidence 3456999999999999999999875 57899999844 11 1122 357
Q ss_pred HHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEc--CCCeeEEeecceEEEccCCCC
Q 007975 280 ITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVR--GNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 280 ~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~--~~G~~~~i~~D~vI~a~G~~~ 335 (583)
+.+++.+.+++.||+++.++ |++++. +.+.+... .++.. +.+|.+|+|+|..+
T Consensus 86 ~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~--~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 86 LMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEP--VTTDAIILATGASA 142 (338)
T ss_dssp HHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCC--EEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcE--EEeCEEEECcCCCc
Confidence 88889999999999999998 988874 44655442 23443 89999999999643
No 168
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.12 E-value=1.7e-05 Score=84.83 Aligned_cols=104 Identities=13% Similarity=0.280 Sum_probs=74.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCce---EEEEecCCcccC--------------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVK---ITLLEAADHILN-------------------------- 274 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~---Vtlv~~~~~il~-------------------------- 274 (583)
++|+|||||++|+.+|..|.+... .+.+ |+|+++.+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~-----------~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~ 71 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQE-----------KGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLW 71 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHH-----------TTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCB
T ss_pred CcEEEECccHHHHHHHHHHHhhhh-----------cCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchh
Confidence 389999999999999999987321 1456 999998764310
Q ss_pred -----------cc---------------cHHHHHHHHHHHHhCCCE--EEeCCeEEEEe--CC----eEEEEEcCCCeeE
Q 007975 275 -----------MF---------------DKRITAFAEEKFSRDGID--VKLGSMVVKVT--DK----EIFTKVRGNGETS 320 (583)
Q Consensus 275 -----------~~---------------~~~~~~~~~~~L~~~GV~--v~~~~~V~~v~--~~----~v~~~~~~~G~~~ 320 (583)
.+ ...+.+++.+.+++.|++ ++++++|+.|+ ++ .|++.+..+|+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~ 151 (464)
T 2xve_A 72 SNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIY 151 (464)
T ss_dssp CSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred hcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceE
Confidence 00 145667778888888998 99999999996 33 3444443345444
Q ss_pred EeecceEEEccCCCCchh
Q 007975 321 SMPYGMVVWSTGIAPHAI 338 (583)
Q Consensus 321 ~i~~D~vI~a~G~~~~p~ 338 (583)
++.+|.||+|+|....|.
T Consensus 152 ~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 152 SEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEEESEEEECCCSSSSBC
T ss_pred EEEcCEEEECCCCCCCCc
Confidence 689999999999544443
No 169
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.12 E-value=1.1e-06 Score=92.38 Aligned_cols=35 Identities=17% Similarity=0.285 Sum_probs=32.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCC--CCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~--g~~Vtlie~~~ 91 (583)
..++|||||||++|+++|+.|++. |++|+|||+..
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 347999999999999999999987 99999999874
No 170
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.12 E-value=1.2e-05 Score=84.54 Aligned_cols=96 Identities=17% Similarity=0.236 Sum_probs=74.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc----------------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM---------------------------- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~---------------------------- 275 (583)
.+|+|||||++|+.+|..+++. +.+|+|+|+.+.+...
T Consensus 28 ~dViIIGgG~AGl~aA~~La~~--------------G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~ 93 (417)
T 3v76_A 28 QDVVIIGAGAAGMMCAIEAGKR--------------GRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHF 93 (417)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTT
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHH
Confidence 3899999999999999999875 5789999987653100
Q ss_pred ------------------------------------ccHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCC
Q 007975 276 ------------------------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNG 317 (583)
Q Consensus 276 ------------------------------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G 317 (583)
....+.+.+.+.+++.||+++++++|++++ ++++.+.. .+|
T Consensus 94 ~~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~-~~g 172 (417)
T 3v76_A 94 CKSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTT-SAG 172 (417)
T ss_dssp THHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEE-TTE
T ss_pred HHHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEE-CCc
Confidence 012566677788888999999999999985 45666654 344
Q ss_pred eeEEeecceEEEccCCCCch
Q 007975 318 ETSSMPYGMVVWSTGIAPHA 337 (583)
Q Consensus 318 ~~~~i~~D~vI~a~G~~~~p 337 (583)
++.+|.||+|+|..+.|
T Consensus 173 ---~i~ad~VIlAtG~~S~p 189 (417)
T 3v76_A 173 ---TVDAASLVVASGGKSIP 189 (417)
T ss_dssp ---EEEESEEEECCCCSSCG
T ss_pred ---EEEeeEEEECCCCccCC
Confidence 39999999999976644
No 171
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.11 E-value=4.9e-06 Score=89.20 Aligned_cols=105 Identities=16% Similarity=0.199 Sum_probs=75.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+||++.+.+.-.. ...++...+.+.+++.|+++. ...+|+.+
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~i 246 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVG----------IDMEISKNFQRILQKQGFKFK-LNTKVTGA 246 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCSS----------CCHHHHHHHHHHHHHTTCEEE-CSEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCcc----------cCHHHHHHHHHHHHHCCCEEE-eCceEEEE
Confidence 5799999999999999999999999999999987532100 122455667788888887663 46789999
Q ss_pred ecCCCE-EEEe--cCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAENKK-VYCR--SSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~~~-v~~~--~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.+++. +.+. ... .....++.+|.||+|+|..|+..
T Consensus 247 ~~~~~~~~~v~~~~~~-----~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 247 TKKSDGKIDVSIEAAS-----GGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp EECTTSCEEEEEEETT-----SCCCEEEEESEEEECSCEEECCT
T ss_pred EEcCCceEEEEEEecC-----CCCceEEEcCEEEECcCCCcCCC
Confidence 876532 3332 100 00113799999999999998764
No 172
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.10 E-value=1.8e-05 Score=80.34 Aligned_cols=94 Identities=15% Similarity=0.159 Sum_probs=73.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc---------------Cc----ccHHHHHHH
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------NM----FDKRITAFA 284 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il---------------~~----~~~~~~~~~ 284 (583)
.+|+|||||+.|+.+|..|++. +.+|+|+++.+.+. +. ....+.+++
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 71 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMR--------------GLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGL 71 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHH
Confidence 4899999999999999998764 57999999876431 11 125677778
Q ss_pred HHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 285 EEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 285 ~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
.+.+++.+++++++++|+.++. +.+.+.. .+|++ +.+|.||+|+|..
T Consensus 72 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~-~~g~~--~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 72 VEQVAPFNPVYSLGERAETLEREGDLFKVTT-SQGNA--YTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHGGGCCEEEESCCEEEEEEETTEEEEEE-TTSCE--EEEEEEEECCTTS
T ss_pred HHHHHHcCCEEEeCCEEEEEEECCCEEEEEE-CCCCE--EEeCEEEECCCCC
Confidence 8888888999999999999864 3455553 44654 9999999999963
No 173
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.10 E-value=5.5e-06 Score=88.94 Aligned_cols=104 Identities=12% Similarity=0.239 Sum_probs=75.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+||||++.+.+.- . ...++...+.+.+++.|+++. ...+|+.+
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~---------~~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 250 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA--S---------MDGEVAKATQKFLKKQGLDFK-LSTKVISA 250 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS--S---------SCHHHHHHHHHHHHHTTCEEE-CSEEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc--c---------cCHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 57999999999999999999999999999999875321 1 122456677788888886653 46789999
Q ss_pred ec--CCCE--EEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DA--ENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~--~~~~--v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+. +.+. +.+.+.. +++..++.+|.||+|+|..|+..
T Consensus 251 ~~~~~~~~~~v~~~~~~-----~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 251 KRNDDKNVVEIVVEDTK-----TNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEETTTTEEEEEEEETT-----TTEEEEEEESEEEECSCEEECCT
T ss_pred EEecCCCeEEEEEEEcC-----CCCceEEECCEEEECCCCCcCCC
Confidence 86 5543 3443210 01123799999999999998764
No 174
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.10 E-value=7.6e-06 Score=88.37 Aligned_cols=98 Identities=17% Similarity=0.325 Sum_probs=74.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+||||++.+... +. ...++...+.+.+++.|+++. ...+|+.+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~gv~i~-~~~~v~~i 243 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL--RK---------FDESVINVLENDMKKNNINIV-TFADVVEI 243 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC--TT---------SCHHHHHHHHHHHHHTTCEEE-CSCCEEEE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC--cc---------cchhhHHHHHHHHHhCCCEEE-ECCEEEEE
Confidence 5799999999999999999999999999999987532 11 122455667788888886663 46788888
Q ss_pred ecCC-C--EEEEecCCCCCCCCCceEE-eecCEEEEccCCCCCC
Q 007975 138 DAEN-K--KVYCRSSQNTNLNGKEEFC-MDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~~~-~--~v~~~~~~~~~~~~~~~~~-i~yD~LViAtG~~~~~ 177 (583)
+.+. + .|.+.++. + +.+|.||+|+|..|+.
T Consensus 244 ~~~~~~~~~v~~~~g~----------~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 244 KKVSDKNLSIHLSDGR----------IYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp EESSTTCEEEEETTSC----------EEEEESEEEECCCBCCTT
T ss_pred EEcCCceEEEEECCCc----------EEEECCEEEECCCCCcCC
Confidence 8653 2 44444322 4 8999999999999876
No 175
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.10 E-value=5.3e-06 Score=87.04 Aligned_cols=99 Identities=20% Similarity=0.313 Sum_probs=75.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.... ....+...+.+.+++.|+++. ...+|+.+
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~----------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 210 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV----------VTPEISSYFHDRHSGAGIRMH-YGVRATEI 210 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------SCHHHHHHHHHHHHHTTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc----------cCHHHHHHHHHHHHhCCcEEE-ECCEEEEE
Confidence 5789999999999999999999999999999987543211 123456667788888886653 35688888
Q ss_pred ecCCCE---EEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DAENKK---VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~~~~~---v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+.++.. |.+.++. ++.+|.+|+|+|..|+.
T Consensus 211 ~~~~~~v~~V~~~dG~----------~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 211 AAEGDRVTGVVLSDGN----------TLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp EEETTEEEEEEETTSC----------EEECSEEEECCCEEECC
T ss_pred EecCCcEEEEEeCCCC----------EEEcCEEEECcCCccCH
Confidence 876543 4444432 89999999999998865
No 176
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.09 E-value=6.8e-06 Score=81.68 Aligned_cols=89 Identities=9% Similarity=0.020 Sum_probs=70.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~ 136 (583)
..++|+|||+|+.|+.+|..|.+.| +|+++++.+. .+...+.+.+++.+++ ++..++..
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~------------------~~~~~~~~~l~~~gv~--i~~~~v~~ 198 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV------------------EPDADQHALLAARGVR--VETTRIRE 198 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC------------------CCCHHHHHHHHHTTCE--EECSCEEE
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC------------------CCCHHHHHHHHHCCcE--EEcceeee
Confidence 3579999999999999999999888 9999997754 2234566778888855 45688999
Q ss_pred EecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
++.+. .|.+.++. ++.+|.+|+|+|..|+.
T Consensus 199 i~~~~-~v~~~~g~----------~~~~D~vi~a~G~~p~~ 228 (297)
T 3fbs_A 199 IAGHA-DVVLADGR----------SIALAGLFTQPKLRITV 228 (297)
T ss_dssp EETTE-EEEETTSC----------EEEESEEEECCEEECCC
T ss_pred eecCC-eEEeCCCC----------EEEEEEEEEccCcccCc
Confidence 98754 67766543 79999999999998764
No 177
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.09 E-value=4.1e-06 Score=87.96 Aligned_cols=100 Identities=16% Similarity=0.248 Sum_probs=72.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC--c---------ccHHHHHHHHHHHHhCC
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN--M---------FDKRITAFAEEKFSRDG 292 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~--~---------~~~~~~~~~~~~L~~~G 292 (583)
++|+|||||++|+++|..|.+... .+.+|+|+++.+.+.- . ...++...+.+.+++.|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~-----------~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVG-----------SKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKG 70 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHG-----------GGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGT
T ss_pred CeEEEECCCHHHHHHHHHHHhhCC-----------CCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCC
Confidence 389999999999999999987211 2579999999886421 1 11223344567778889
Q ss_pred CEEEeCCeEEEEeCC--eEEEEEcCCCeeEEeecceEEEccCCCCc
Q 007975 293 IDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (583)
Q Consensus 293 V~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 336 (583)
|+++.+ +|++++.+ .|++.+ .+++..++.+|.||+|+|..+.
T Consensus 71 v~~~~~-~v~~i~~~~~~V~~~~-g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 71 IQFQEG-TVEKIDAKSSMVYYTK-PDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp CEEEEC-EEEEEETTTTEEEEEC-TTSCEEEEECSEEEECCCCEEC
T ss_pred eEEEEe-eEEEEeCCCCEEEEcc-CCcccceeeCCEEEECCCCCcC
Confidence 999988 89999764 566654 2233346999999999996443
No 178
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.08 E-value=5.8e-06 Score=89.85 Aligned_cols=101 Identities=18% Similarity=0.168 Sum_probs=77.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~ 136 (583)
-+++++|||||+.|+..|..+++.|.+|||+++...+ +. ...++...+...+++.++.+. ....+..
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L------~~------~D~ei~~~l~~~l~~~gi~~~-~~~~v~~ 288 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVL------RG------FDQQCAVKVKLYMEEQGVMFK-NGILPKK 288 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSS------TT------SCHHHHHHHHHHHHHTTCEEE-ETCCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEecccccc------cc------cchhHHHHHHHHHHhhcceee-cceEEEE
Confidence 4689999999999999999999999999999875321 11 123567778888999997663 4677888
Q ss_pred EecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+......+.+....+ ..+.+|.|++|+|-+|+..
T Consensus 289 ~~~~~~~~~v~~~~~--------~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 289 LTKMDDKILVEFSDK--------TSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp EEEETTEEEEEETTS--------CEEEESEEEECSCEEESCG
T ss_pred EEecCCeEEEEEcCC--------CeEEEEEEEEcccccCCcc
Confidence 887777766654331 1678999999999998864
No 179
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.08 E-value=3.3e-06 Score=87.42 Aligned_cols=93 Identities=17% Similarity=0.352 Sum_probs=71.3
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEEe
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKID 138 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id 138 (583)
++|+|||||+.|+.+|..|++.|.+|||+++.+.+.- ...++...+.+.+++.|+++. ...+|+.++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------~~~~~~~~l~~~l~~~gV~i~-~~~~v~~i~ 210 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------------LDEELSNMIKDMLEETGVKFF-LNSELLEAN 210 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT------------CCHHHHHHHHHHHHHTTEEEE-CSCCEEEEC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc------------CCHHHHHHHHHHHHHCCCEEE-cCCEEEEEE
Confidence 7999999999999999999999999999999875321 122455667788888885542 356788887
Q ss_pred cCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 139 AENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 139 ~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
...|.+++ + ++.+|.||+|+|..|+.
T Consensus 211 --~~~v~~~~---------g--~i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 211 --EEGVLTNS---------G--FIEGKVKICAIGIVPNV 236 (367)
T ss_dssp --SSEEEETT---------E--EEECSCEEEECCEEECC
T ss_pred --eeEEEECC---------C--EEEcCEEEECcCCCcCH
Confidence 34566642 1 38999999999998864
No 180
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.08 E-value=5.6e-06 Score=87.67 Aligned_cols=99 Identities=17% Similarity=0.307 Sum_probs=73.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|.+.|.+|+|+++.+...-. ....++...+.+.+++.|+++. ...+|+.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 217 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER----------VTAPPVSAFYEHLHREAGVDIR-TGTQVCGF 217 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT----------TSCHHHHHHHHHHHHHHTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc----------hhhHHHHHHHHHHHHhCCeEEE-eCCEEEEE
Confidence 579999999999999999999999999999988653211 0122445566777888886653 35688888
Q ss_pred ec--CCC---EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DA--ENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~--~~~---~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+. ++. .|.+.++. .+.+|.||+|+|..|+.
T Consensus 218 ~~~~~~~~v~~v~~~~G~----------~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 218 EMSTDQQKVTAVLCEDGT----------RLPADLVIAGIGLIPNC 252 (431)
T ss_dssp EECTTTCCEEEEEETTSC----------EEECSEEEECCCEEECC
T ss_pred EeccCCCcEEEEEeCCCC----------EEEcCEEEECCCCCcCc
Confidence 86 333 34444332 79999999999998764
No 181
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.08 E-value=4.8e-06 Score=87.46 Aligned_cols=37 Identities=16% Similarity=0.317 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCe-EEEEcCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYD-VQVISPRNYF 93 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~-Vtlie~~~~~ 93 (583)
...+|+|||||++|+++|..|++.|++ |+|||+.+..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 357999999999999999999999999 9999998654
No 182
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.07 E-value=5.2e-06 Score=88.74 Aligned_cols=101 Identities=19% Similarity=0.216 Sum_probs=75.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|.+.|.+|||+++.+.+. +. ...++...+.+.+++.|+++. ...+|+.+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-----~~------~~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 238 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-----PN------EDADVSKEIEKQFKKLGVTIL-TATKVESI 238 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-----TT------SCHHHHHHHHHHHHHHTCEEE-CSCEEEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-----cc------cCHHHHHHHHHHHHHcCCEEE-eCcEEEEE
Confidence 5799999999999999999999999999999987532 11 122455667777888886653 46789999
Q ss_pred ecCCCEE--EEe-cCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAENKKV--YCR-SSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~~~v--~~~-~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.+.+.+ .+. ++ +..++.+|.+|+|+|..|+..
T Consensus 239 ~~~~~~~~v~~~~~g--------~~~~~~~D~vv~a~G~~p~~~ 274 (464)
T 2a8x_A 239 ADGGSQVTVTVTKDG--------VAQELKAEKVLQAIGFAPNVE 274 (464)
T ss_dssp EECSSCEEEEEESSS--------CEEEEEESEEEECSCEEECCS
T ss_pred EEcCCeEEEEEEcCC--------ceEEEEcCEEEECCCCCccCC
Confidence 8765433 333 22 123799999999999998764
No 183
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.07 E-value=3.2e-06 Score=90.89 Aligned_cols=102 Identities=15% Similarity=0.190 Sum_probs=73.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+||||++.+.+.- . ...++...+.+.+++.++++. ...+|..+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-----~------~~~~~~~~l~~~l~~~gV~i~-~~~~v~~i 252 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-----G------ADRDLVKVWQKQNEYRFDNIM-VNTKTVAV 252 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHGGGEEEEE-CSCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-----c------cCHHHHHHHHHHHHhcCCEEE-ECCEEEEE
Confidence 57999999999999999999988999999999875321 1 122455667788888885542 35688898
Q ss_pred ecCCCE--EEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~~~~~--v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+.+.+. |.+.+..+ .+ .++.+|.||+|+|..|+.
T Consensus 253 ~~~~~~~~v~~~~~~~----~g--~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 253 EPKEDGVYVTFEGANA----PK--EPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp EEETTEEEEEEESSSC----CS--SCEEESCEEECCCEEECG
T ss_pred EEcCCeEEEEEeccCC----Cc--eEEEcCEEEECcCCCcCC
Confidence 876543 44443000 01 167899999999999876
No 184
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.06 E-value=7.1e-06 Score=89.48 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=32.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC---CCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~---~g~~Vtlie~~~ 91 (583)
..++|||||||++|+++|..|++ .|++|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 35799999999999999999998 999999999965
No 185
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.06 E-value=1e-05 Score=86.20 Aligned_cols=102 Identities=17% Similarity=0.203 Sum_probs=75.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.... ...++...+.+.+++.|+++. ...+|+.+
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~----------~d~~~~~~l~~~l~~~GV~i~-~~~~v~~i 215 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY----------FDKEMVAEVQKSLEKQAVIFH-FEETVLGI 215 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------CCHHHHHHHHHHHHTTTEEEE-ETCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc----------CCHHHHHHHHHHHHHcCCEEE-eCCEEEEE
Confidence 5789999999999999999999999999999987542110 123456677888888885552 35788999
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ 179 (583)
+..+..+.+.... + ++.+|.||+|+|..|+...
T Consensus 216 ~~~~~~v~v~~~~-------g--~i~aD~Vv~A~G~~p~~~~ 248 (452)
T 3oc4_A 216 EETANGIVLETSE-------Q--EISCDSGIFALNLHPQLAY 248 (452)
T ss_dssp EECSSCEEEEESS-------C--EEEESEEEECSCCBCCCSS
T ss_pred EccCCeEEEEECC-------C--EEEeCEEEECcCCCCChHH
Confidence 8555444433321 1 7899999999999987653
No 186
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.06 E-value=2e-06 Score=91.10 Aligned_cols=95 Identities=21% Similarity=0.312 Sum_probs=67.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc--CcccH---------HHHHHHHHHHHhCC
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--NMFDK---------RITAFAEEKFSRDG 292 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il--~~~~~---------~~~~~~~~~L~~~G 292 (583)
|+|||||||+.|+.+|..|.+.. ++.+||||++.+... |.+.. ++...+.+.+++.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~------------~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g 70 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CcEEEECCCHHHHHHHHHHhccC------------cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC
Confidence 48999999999999999998764 257999999988642 11111 11111234567789
Q ss_pred CEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 293 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
|+++.+ +|++|+.+.-++.. ++|++ +++|.+|+|+|.+
T Consensus 71 v~~i~~-~v~~Id~~~~~V~~-~~g~~--i~YD~LViAtG~~ 108 (430)
T 3hyw_A 71 IEFINE-KAESIDPDANTVTT-QSGKK--IEYDYLVIATGPK 108 (430)
T ss_dssp EEEECS-CEEEEETTTTEEEE-TTCCE--EECSEEEECCCCE
T ss_pred cEEEEe-EEEEEECCCCEEEE-CCCCE--EECCEEEEeCCCC
Confidence 999876 79999865433332 34775 9999999999954
No 187
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.05 E-value=1.2e-05 Score=81.11 Aligned_cols=103 Identities=22% Similarity=0.279 Sum_probs=73.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+.. ...+...+.+.+++.++++. ...+++.+
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 210 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA-------------EKILIKRLMDKVENGNIILH-TNRTLEEV 210 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC-------------CHHHHHHHHHHHHTSSEEEE-CSCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc-------------CHHHHHHHHHhcccCCeEEE-cCceeEEE
Confidence 57999999999999999999999999999998875421 11234455566667775442 36789999
Q ss_pred ecCCC---EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.+.. .|.+.+... .++..++.+|.+|+|+|..|+..
T Consensus 211 ~~~~~~v~~v~~~~~~~----~g~~~~i~~D~vv~a~G~~p~~~ 250 (320)
T 1trb_A 211 TGDQMGVTGVRLRDTQN----SDNIESLDVAGLFVAIGHSPNTA 250 (320)
T ss_dssp EECSSSEEEEEEECCTT----CCCCEEEECSEEEECSCEEESCG
T ss_pred EcCCCceEEEEEEeccC----CCceEEEEcCEEEEEeCCCCChH
Confidence 87652 256654210 01124799999999999988753
No 188
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.05 E-value=6.3e-06 Score=85.90 Aligned_cols=94 Identities=16% Similarity=0.340 Sum_probs=68.5
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc---CcccHHH---------HHHHHHHHHhCC
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---NMFDKRI---------TAFAEEKFSRDG 292 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il---~~~~~~~---------~~~~~~~L~~~G 292 (583)
+|+|||||+.|+.+|..|.. .+.+|+|+++.+.+. +.++..+ .....+.+++.|
T Consensus 11 ~~vIvGgG~AGl~aA~~L~~--------------~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~ 76 (385)
T 3klj_A 11 KILILGAGPAGFSAAKAALG--------------KCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNN 76 (385)
T ss_dssp SEEEECCSHHHHHHHHHHTT--------------TCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTT
T ss_pred CEEEEcCcHHHHHHHHHHhC--------------CCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCC
Confidence 89999999999999999932 368999999987642 1222111 122346677899
Q ss_pred CEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 293 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
|+++++++|++++.+.-++.. .+|++ +.+|.+|+|+|..+
T Consensus 77 i~~~~~~~V~~id~~~~~v~~-~~g~~--~~yd~lvlAtG~~p 116 (385)
T 3klj_A 77 IKVITSEFATSIDPNNKLVTL-KSGEK--IKYEKLIIASGSIA 116 (385)
T ss_dssp CEEECSCCEEEEETTTTEEEE-TTSCE--EECSEEEECCCEEE
T ss_pred CEEEeCCEEEEEECCCCEEEE-CCCCE--EECCEEEEecCCCc
Confidence 999999999999864333332 34764 99999999999533
No 189
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.05 E-value=6.5e-06 Score=90.78 Aligned_cols=98 Identities=17% Similarity=0.364 Sum_probs=77.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.-. ...++...+.+.+++.|+++. ...+|+.+
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 254 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-----------IDYEMAAYVHEHMKNHDVELV-FEDGVDAL 254 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------SCHHHHHHHHHHHHHTTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-----------CCHHHHHHHHHHHHHcCCEEE-ECCeEEEE
Confidence 579999999999999999999999999999988643211 122456667788888886653 36789999
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+.+.+.|.+.++. ++.+|.||+|+|..|+.
T Consensus 255 ~~~~~~v~~~~g~----------~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 255 EENGAVVRLKSGS----------VIQTDMLILAIGVQPES 284 (588)
T ss_dssp EGGGTEEEETTSC----------EEECSEEEECSCEEECC
T ss_pred ecCCCEEEECCCC----------EEEcCEEEEccCCCCCh
Confidence 8876778776543 89999999999998875
No 190
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.05 E-value=6.2e-06 Score=87.48 Aligned_cols=97 Identities=22% Similarity=0.318 Sum_probs=70.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc--cCcc---------cHHHHHHHHHHHHhCC
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI--LNMF---------DKRITAFAEEKFSRDG 292 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i--l~~~---------~~~~~~~~~~~L~~~G 292 (583)
++|+|||||+.|+++|..|++... .+.+|+||++.+.+ .|.+ ..++...+.+.+++.|
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~-----------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 73 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALG-----------SGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKG 73 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHG-----------GGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTT
T ss_pred CcEEEECCcHHHHHHHHHHhccCC-----------CcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCC
Confidence 489999999999999999988432 25799999999865 2211 1233334566778899
Q ss_pred CEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 293 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
|+++. .+|++++.+.-++.. .+|++ +.+|.+|+|+|..+
T Consensus 74 v~~~~-~~v~~id~~~~~V~~-~~g~~--i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 74 IHFIA-QSAEQIDAEAQNITL-ADGNT--VHYDYLMIATGPKL 112 (437)
T ss_dssp CEEEC-SCEEEEETTTTEEEE-TTSCE--EECSEEEECCCCEE
T ss_pred CEEEE-eEEEEEEcCCCEEEE-CCCCE--EECCEEEECCCCCc
Confidence 99985 689999865323332 34664 99999999999543
No 191
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.05 E-value=2.8e-05 Score=79.96 Aligned_cols=96 Identities=14% Similarity=0.227 Sum_probs=71.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCc-eEEEEecCC------------cc-cCc--------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAAD------------HI-LNM-------------- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~-~Vtlv~~~~------------~i-l~~-------------- 275 (583)
.+|+|||||++|+.+|..|++. +. +|+|+++.+ .+ .+.
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~--------------g~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 70 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDF--------------GITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAI 70 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCS
T ss_pred CcEEEECcCHHHHHHHHHHHHc--------------CCCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhc
Confidence 3899999999999999999874 45 899999875 00 000
Q ss_pred ---------------ccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCC--eEEEEEcCCCeeEEeecceEEEccCCCCch
Q 007975 276 ---------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHA 337 (583)
Q Consensus 276 ---------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p 337 (583)
....+.+++.+.+++.|++++.+++|++++.+ .+.+.. .+|+ +.+|.||+|+|..+.|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~-~~g~---~~~d~vVlAtG~~~~p 145 (369)
T 3d1c_A 71 SMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIAT-TTET---YHADYIFVATGDYNFP 145 (369)
T ss_dssp STTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE-SSCC---EEEEEEEECCCSTTSB
T ss_pred cccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEe-CCCE---EEeCEEEECCCCCCcc
Confidence 01345667777888899999999999999743 455554 3343 8999999999975544
No 192
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.05 E-value=1.2e-05 Score=85.67 Aligned_cols=101 Identities=15% Similarity=0.328 Sum_probs=75.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.-. ....++...+.+.+++.|+++. ...+|+.+
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~i 217 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK----------YFDKEFTDILAKDYEAHGVNLV-LGSKVAAF 217 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT----------TSCHHHHHHHHHHHHHTTCEEE-ESSCEEEE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh----------hhhhhHHHHHHHHHHHCCCEEE-cCCeeEEE
Confidence 579999999999999999999999999999988653211 0122455667788888997763 46789999
Q ss_pred ecCCCEEE-EecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAENKKVY-CRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~~~v~-~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.++..+. +.. + + .++.+|.||+|+|..|+..
T Consensus 218 ~~~~~~v~~v~~-~-----g---~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 218 EEVDDEIITKTL-D-----G---KEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp EEETTEEEEEET-T-----S---CEEEESEEEECCCEEECCG
T ss_pred EcCCCeEEEEEe-C-----C---CEEECCEEEECcCCCCCHH
Confidence 86444443 222 1 1 1799999999999998753
No 193
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.05 E-value=7.8e-06 Score=88.06 Aligned_cols=100 Identities=18% Similarity=0.338 Sum_probs=74.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~ 136 (583)
..++|+|||||+.|+.+|..|++.|.+|||+++.+.+.-. ....++...+.+.+++.|+++. ...+|+.
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~----------~~~~~~~~~l~~~l~~~GV~i~-~~~~v~~ 261 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG----------YYDRDLTDLMAKNMEEHGIQLA-FGETVKE 261 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT----------TSCHHHHHHHHHHHHTTTCEEE-ETCCEEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh----------HHHHHHHHHHHHHHHhCCeEEE-eCCEEEE
Confidence 4579999999999999999999889999999998753211 0122455667788888887663 4668888
Q ss_pred EecCCC--EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 137 IDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 137 id~~~~--~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
++.+++ .+.+ ++. ++.+|.||+|+|.+|+..
T Consensus 262 i~~~~~v~~v~~-~g~----------~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 262 VAGNGKVEKIIT-DKN----------EYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp EECSSSCCEEEE-SSC----------EEECSEEEECCCEEECCG
T ss_pred EEcCCcEEEEEE-CCc----------EEECCEEEECCCCCcChH
Confidence 886443 2443 221 799999999999998754
No 194
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.04 E-value=4.3e-06 Score=87.49 Aligned_cols=97 Identities=21% Similarity=0.320 Sum_probs=67.7
Q ss_pred cceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-ccHHH---------HHHHHHHHHhCC
Q 007975 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-FDKRI---------TAFAEEKFSRDG 292 (583)
Q Consensus 223 ~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-~~~~~---------~~~~~~~L~~~G 292 (583)
+|+|+|||||+.|+.+|..|.+.. .+.+|+||++.+..... +...+ ...-.+.+.++|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~------------~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~g 69 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD------------PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHG 69 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC------------cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCC
Confidence 579999999999999999987753 25799999988753211 11111 001124566789
Q ss_pred CEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 293 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
|+++.+ +|+.|+.+.-++.. .+|++ +.+|.+|+|+|..+
T Consensus 70 v~~i~~-~v~~id~~~~~v~~-~~g~~--i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 70 IQVVHD-SALGIDPDKKLVKT-AGGAE--FAYDRCVVAPGIDL 108 (401)
T ss_dssp CEEECS-CEEEEETTTTEEEE-TTSCE--EECSEEEECCCEEE
T ss_pred CEEEEe-EEEEEEccCcEEEe-cccce--eecceeeeccCCcc
Confidence 999876 69999865433332 34765 99999999999543
No 195
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=4.8e-06 Score=89.16 Aligned_cols=104 Identities=18% Similarity=0.265 Sum_probs=76.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|.+.|.+|+||++.+.+.- . ...++...+.+.+++.|+++. ...+|..+
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~--~---------~~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 244 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP--T---------MDAEIRKQFQRSLEKQGMKFK-LKTKVVGV 244 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST--T---------SCHHHHHHHHHHHHHSSCCEE-CSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc--c---------ccHHHHHHHHHHHHHcCCEEE-eCCEEEEE
Confidence 57999999999999999999988999999999875321 1 122455667788888897763 46789999
Q ss_pred ecCCC--EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~~--~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.+.. .+.+.+.. +++..++.+|.||+|+|..|+..
T Consensus 245 ~~~~~~~~v~~~~~~-----~g~~~~~~~D~vv~a~G~~p~~~ 282 (470)
T 1dxl_A 245 DTSGDGVKLTVEPSA-----GGEQTIIEADVVLVSAGRTPFTS 282 (470)
T ss_dssp ECSSSSEEEEEEESS-----SCCCEEEEESEEECCCCEEECCT
T ss_pred EEcCCeEEEEEEecC-----CCcceEEECCEEEECCCCCcCCC
Confidence 87654 33443210 00123799999999999998764
No 196
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.03 E-value=2.1e-05 Score=80.79 Aligned_cols=94 Identities=21% Similarity=0.244 Sum_probs=73.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc---------------Cc----ccHHHHHHH
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------NM----FDKRITAFA 284 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il---------------~~----~~~~~~~~~ 284 (583)
.+|+|||||+.|+.+|..|++. +.+|+|+++.+.+. +. ....+.+.+
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~--------------g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMN--------------NISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESL 80 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhC--------------CCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHH
Confidence 4899999999999999998764 57999999876431 11 125677788
Q ss_pred HHHHHhCCCEEEeCCeEEEEeC--C-eEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 285 EEKFSRDGIDVKLGSMVVKVTD--K-EIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 285 ~~~L~~~GV~v~~~~~V~~v~~--~-~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
.+.+++.|++++.+++|+.++. + .+.+.. .+|+. +.+|.||+|+|..
T Consensus 81 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~-~~g~~--~~~~~li~AtG~~ 130 (360)
T 3ab1_A 81 WAQAERYNPDVVLNETVTKYTKLDDGTFETRT-NTGNV--YRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHTTCCEEECSCCEEEEEECTTSCEEEEE-TTSCE--EEEEEEEECCTTC
T ss_pred HHHHHHhCCEEEcCCEEEEEEECCCceEEEEE-CCCcE--EEeeEEEEccCCC
Confidence 8888889999999999999974 2 455543 44654 9999999999963
No 197
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.03 E-value=4.9e-06 Score=91.63 Aligned_cols=38 Identities=24% Similarity=0.327 Sum_probs=33.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCC------CCeEEEEcCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNP------SYDVQVISPRNYFA 94 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~------g~~Vtlie~~~~~~ 94 (583)
+..+|||||||+||+++|..|++. |++|+|||+.+...
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g 77 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIG 77 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTT
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCC
Confidence 357999999999999999999977 99999999986543
No 198
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.03 E-value=6.7e-06 Score=88.35 Aligned_cols=101 Identities=14% Similarity=0.222 Sum_probs=74.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~ 136 (583)
..++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. ....++...+.+.+++.|+++. ...+|+.
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----------~~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~ 252 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT-----------IYDGDMAEYIYKEADKHHIEIL-TNENVKA 252 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-----------SSCHHHHHHHHHHHHHTTCEEE-CSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-----------cCCHHHHHHHHHHHHHcCcEEE-cCCEEEE
Confidence 468999999999999999999999999999998865321 0123455667788888886653 3678888
Q ss_pred EecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
++.+++...+.... .++.+|.||+|+|..|+..
T Consensus 253 i~~~~~v~~v~~~~---------~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 253 FKGNERVEAVETDK---------GTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp EEESSBEEEEEETT---------EEEECSEEEECSCEEESCG
T ss_pred EEcCCcEEEEEECC---------CEEEcCEEEECcCCCcChH
Confidence 88765432222211 2799999999999988753
No 199
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.03 E-value=7.5e-06 Score=87.51 Aligned_cols=102 Identities=16% Similarity=0.296 Sum_probs=73.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.- . . ..++...+.+.+++.++++. ...+|+.+
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-----~-----~-~~~~~~~l~~~l~~~gv~i~-~~~~v~~i 233 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-----Q-----F-DPLLSATLAENMHAQGIETH-LEFAVAAL 233 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T-----S-CHHHHHHHHHHHHHTTCEEE-SSCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-----c-----c-CHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 57999999999999999999999999999998865321 0 1 12345566777888886653 36678888
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.++..+.+...+ + +. ++.+|.||+|+|..|+..
T Consensus 234 ~~~~~~~~v~~~~-----G-~~-~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 234 ERDAQGTTLVAQD-----G-TR-LEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp EEETTEEEEEETT-----C-CE-EEEESEEEECSCEEESCT
T ss_pred EEeCCeEEEEEeC-----C-cE-EEEcCEEEECCCCCcCCC
Confidence 8754433333221 1 11 689999999999998763
No 200
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.02 E-value=7.9e-06 Score=88.14 Aligned_cols=98 Identities=19% Similarity=0.277 Sum_probs=74.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC---CCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP---SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~---g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v 134 (583)
.++|+|||||+.|+.+|..|++. |.+||||++.+.+. + . ...++...+.+.+++.|+++. ...+|
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l--~---~------~d~~~~~~l~~~l~~~GV~i~-~~~~v 258 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL--R---G------FDETIREEVTKQLTANGIEIM-TNENP 258 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC--T---T------SCHHHHHHHHHHHHHTTCEEE-ESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc--c---c------cCHHHHHHHHHHHHhCCCEEE-eCCEE
Confidence 57999999999999999999876 99999999987532 1 1 122455667788888887663 46789
Q ss_pred EEEecCC-C--EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 135 FKIDAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 135 ~~id~~~-~--~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+.++.+. + .|.+.++. ++.+|.||+|+|..|+.
T Consensus 259 ~~i~~~~~~~~~v~~~~G~----------~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 259 AKVSLNTDGSKHVTFESGK----------TLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp EEEEECTTSCEEEEETTSC----------EEEESEEEECSCEEECC
T ss_pred EEEEEcCCceEEEEECCCc----------EEEcCEEEECCCCcccc
Confidence 9998653 2 45444332 79999999999999876
No 201
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.02 E-value=6.4e-06 Score=88.46 Aligned_cols=99 Identities=17% Similarity=0.263 Sum_probs=73.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|.+.|.+|+|+++.+...- . ...++...+.+.+++.|+++. ...+|+.+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----~------~d~~~~~~l~~~l~~~Gv~i~-~~~~v~~i 252 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-----K------FDECIQNTITDHYVKEGINVH-KLSKIVKV 252 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-----T------SCHHHHHHHHHHHHHHTCEEE-CSCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-----c------cCHHHHHHHHHHHHhCCeEEE-eCCEEEEE
Confidence 57999999999999999999999999999999875321 1 122455667777888886653 46688888
Q ss_pred ecCCC----EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DAENK----KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~~~~----~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+.+.. .|.+.++ +.++.+|.||+|+|.+|+.
T Consensus 253 ~~~~~~~~~~v~~~~G---------~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 253 EKNVETDKLKIHMNDS---------KSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp EECC-CCCEEEEETTS---------CEEEEESEEEECSCEEECC
T ss_pred EEcCCCcEEEEEECCC---------cEEEEcCEEEECCCCCCcc
Confidence 76432 3444332 0279999999999999876
No 202
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.02 E-value=7e-06 Score=88.44 Aligned_cols=99 Identities=15% Similarity=0.238 Sum_probs=74.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC---CCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP---SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~---g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v 134 (583)
.++|+|||||+.|+.+|..|.+. |.+|+||++.+.+. +. ...++...+.+.+++.|+++. ...+|
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-----~~------~d~~~~~~l~~~l~~~GV~i~-~~~~v 254 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-----RG------FDSELRKQLTEQLRANGINVR-THENP 254 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-----TT------SCHHHHHHHHHHHHHTTEEEE-ETCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-----cc------cCHHHHHHHHHHHHhCCCEEE-eCCEE
Confidence 57999999999999999999876 99999999987532 11 122456677788888886553 46688
Q ss_pred EEEecCC-C--EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 135 FKIDAEN-K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 135 ~~id~~~-~--~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.++.+. + .|.+.++. ++.+|.||+|+|..|+..
T Consensus 255 ~~i~~~~~~~~~v~~~~G~----------~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 255 AKVTKNADGTRHVVFESGA----------EADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp EEEEECTTSCEEEEETTSC----------EEEESEEEECSCEEESCT
T ss_pred EEEEEcCCCEEEEEECCCc----------EEEcCEEEEccCCCcCcc
Confidence 8988754 2 44443322 799999999999998764
No 203
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.01 E-value=3e-05 Score=78.11 Aligned_cols=97 Identities=21% Similarity=0.248 Sum_probs=71.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+.. ...+.+.+.+.++++. ...+++.+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~-----------------~~~l~~~l~~~gv~i~-~~~~v~~i 216 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC-----------------ENAYVQEIKKRNIPYI-MNAQVTEI 216 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS-----------------CHHHHHHHHHTTCCEE-CSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC-----------------CHHHHHHHhcCCcEEE-cCCeEEEE
Confidence 47899999999999999999999999999998865421 1224445557787663 47788999
Q ss_pred ecCCC---EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+.++. .|.+.... +++..++.+|.||+|+|..|+.
T Consensus 217 ~~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~ 254 (319)
T 3cty_A 217 VGDGKKVTGVKYKDRT-----TGEEKLIETDGVFIYVGLIPQT 254 (319)
T ss_dssp EESSSSEEEEEEEETT-----TCCEEEECCSEEEECCCEEECC
T ss_pred ecCCceEEEEEEEEcC-----CCceEEEecCEEEEeeCCccCh
Confidence 87654 45555211 1113479999999999998875
No 204
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.01 E-value=1.4e-05 Score=87.78 Aligned_cols=37 Identities=19% Similarity=0.273 Sum_probs=33.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~ 94 (583)
.++|+|||+|++|+++|..|++.|++|+|||+.+..+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~ 162 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPG 162 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCC
Confidence 5699999999999999999999999999999987554
No 205
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.01 E-value=2.5e-05 Score=78.27 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=70.8
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCC--ccc--------C----cccHHHHHHHHHHHHh
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD--HIL--------N----MFDKRITAFAEEKFSR 290 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~--~il--------~----~~~~~~~~~~~~~L~~ 290 (583)
+|+|||||+.|+.+|..+++. +.+|+|++... ... + ...+.+.+.+.+.+++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~--------------g~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARK--------------GIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDE 68 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--------------TCCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHT
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence 799999999999999999874 57899997531 110 0 1135677888888899
Q ss_pred CCCEEEeCCeEEEEeCC-----eEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 291 DGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 291 ~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
.|++++.+++|+.++.+ ...+.. .+|+. +.+|.+|+|+|..+
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~-~~g~~--~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIET-ASGAV--LKARSIIVATGAKW 115 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEE-TTSCE--EEEEEEEECCCEEE
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEE-CCCCE--EEeCEEEECcCCCc
Confidence 99999999999999642 344443 45654 99999999999543
No 206
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.00 E-value=8.5e-06 Score=87.18 Aligned_cols=103 Identities=14% Similarity=0.162 Sum_probs=75.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHH-HhCCCcEEEEEeEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIV-RKKNVDICFWEAECFK 136 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~-~~~~i~v~~~~~~v~~ 136 (583)
.++|+|||||+.|+.+|..|.+.|.+|+|+++.+.+.- . ...++...+.+.+ ++.|+++. ...+|+.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~---------~d~~~~~~l~~~l~~~~gv~i~-~~~~v~~ 241 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP--T---------LDEDVTNALVGALAKNEKMKFM-TSTKVVG 241 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--T---------SCHHHHHHHHHHHHHHTCCEEE-CSCEEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc--c---------CCHHHHHHHHHHHhhcCCcEEE-eCCEEEE
Confidence 57999999999999999999999999999999875321 1 1224566677888 88886653 4678999
Q ss_pred EecCCC--EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 137 IDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 137 id~~~~--~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
++.+.+ .+.+.... + +..++.+|.||+|+|..|+..
T Consensus 242 i~~~~~~~~v~~~~~~-----g-~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 242 GTNNGDSVSLEVEGKN-----G-KRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp EEECSSSEEEEEECC---------EEEEEESEEEECSCEEECCT
T ss_pred EEEcCCeEEEEEEcCC-----C-ceEEEECCEEEECCCcccCCC
Confidence 987654 34443111 1 123799999999999998764
No 207
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.00 E-value=8.4e-06 Score=88.05 Aligned_cols=35 Identities=17% Similarity=0.426 Sum_probs=32.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+..+|+|||||++|+++|+.|++.|++|+|||+++
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 35799999999999999999999999999999975
No 208
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.00 E-value=3.5e-05 Score=80.69 Aligned_cols=96 Identities=19% Similarity=0.237 Sum_probs=73.0
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC-----------------c------------
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-----------------M------------ 275 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~-----------------~------------ 275 (583)
+|+|||||++|+.+|..+++. +.+|+|+|+.+.+.. .
T Consensus 6 dViIIGgG~aGl~aA~~la~~--------------G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~ 71 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKL--------------GKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFV 71 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTST
T ss_pred CEEEECCcHHHHHHHHHHHhC--------------CCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHH
Confidence 799999999999999999875 578999988764310 0
Q ss_pred -----------------------------------ccHHHHHHHHHHHHhCCCEEEeCCeEEEEe-C-----CeEEEEEc
Q 007975 276 -----------------------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVT-D-----KEIFTKVR 314 (583)
Q Consensus 276 -----------------------------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~-~-----~~v~~~~~ 314 (583)
....+.+.+.+.+++.||+++++++|+++. . +.+.+..
T Consensus 72 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~- 150 (401)
T 2gqf_A 72 KSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQV- 150 (401)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEE-
T ss_pred HHHHHhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEE-
Confidence 123455677788888999999999999986 3 4465554
Q ss_pred CCCeeEEeecceEEEccCCCCchh
Q 007975 315 GNGETSSMPYGMVVWSTGIAPHAI 338 (583)
Q Consensus 315 ~~G~~~~i~~D~vI~a~G~~~~p~ 338 (583)
.+| ++.+|.||+|+|..+.|.
T Consensus 151 ~~g---~i~ad~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 151 NST---QWQCKNLIVATGGLSMPG 171 (401)
T ss_dssp TTE---EEEESEEEECCCCSSCGG
T ss_pred CCC---EEECCEEEECCCCccCCC
Confidence 334 399999999999776553
No 209
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.99 E-value=8.4e-06 Score=87.19 Aligned_cols=99 Identities=15% Similarity=0.221 Sum_probs=74.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|.+.|.+|++|++.+.+. |. ..++...+.+.+++.|+++. ...+|+.+
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~~----------~~~~~~~l~~~l~~~Gv~i~-~~~~v~~i 242 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF--RE----------DPAIGEAVTAAFRAEGIEVL-EHTQASQV 242 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT--TS----------CHHHHHHHHHHHHHTTCEEE-TTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC--CC----------CHHHHHHHHHHHHhCCCEEE-cCCEEEEE
Confidence 5799999999999999999999999999999986532 11 12456677788888886553 35688888
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.++..+.+.... .++.+|.||+|+|..|+..
T Consensus 243 ~~~~~~~~v~~~~---------~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 243 AHMDGEFVLTTTH---------GELRADKLLVATGRTPNTR 274 (467)
T ss_dssp EEETTEEEEEETT---------EEEEESEEEECSCEEESCT
T ss_pred EEeCCEEEEEECC---------cEEEcCEEEECCCCCcCCC
Confidence 8766554433221 2799999999999998753
No 210
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.98 E-value=1.8e-05 Score=88.13 Aligned_cols=36 Identities=19% Similarity=0.358 Sum_probs=33.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCC-CCCeEEEEcCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYF 93 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~-~g~~Vtlie~~~~~ 93 (583)
..+|+|||||++|+++|..|++ .|++|+|||+++..
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 5689999999999999999999 99999999998653
No 211
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.97 E-value=3.3e-05 Score=78.11 Aligned_cols=97 Identities=24% Similarity=0.245 Sum_probs=68.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhH-HHHHHhCCCcEEEEEeEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPV-RNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~-~~~~~~~~i~v~~~~~~v~~ 136 (583)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+... ..+ +.+.+..++++. ...+++.
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~-----------------~~~~~~l~~~~gv~i~-~~~~v~~ 213 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRAN-----------------KVAQARAFANPKMKFI-WDTAVEE 213 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCSC-----------------HHHHHHHHTCTTEEEE-CSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCcc-----------------hHHHHHHHhcCCceEe-cCCceEE
Confidence 478999999999999999999999999999988754210 122 233344564442 3678889
Q ss_pred EecCCC--EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 137 IDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 137 id~~~~--~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
++.+++ .|.+.+.. +++..++.+|.||+|+|..|+.
T Consensus 214 i~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~ 251 (325)
T 2q7v_A 214 IQGADSVSGVKLRNLK-----TGEVSELATDGVFIFIGHVPNT 251 (325)
T ss_dssp EEESSSEEEEEEEETT-----TCCEEEEECSEEEECSCEEESC
T ss_pred EccCCcEEEEEEEECC-----CCcEEEEEcCEEEEccCCCCCh
Confidence 887654 45665311 1123478999999999998875
No 212
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.97 E-value=1.6e-05 Score=85.29 Aligned_cols=103 Identities=21% Similarity=0.274 Sum_probs=76.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~ 136 (583)
..++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.- . ...++...+.+.+++.|+++. ...+|+.
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~---------~~~~~~~~l~~~l~~~Gv~v~-~~~~v~~ 246 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP--A---------VDEQVAKEAQKILTKQGLKIL-LGARVTG 246 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST--T---------SCHHHHHHHHHHHHHTTEEEE-ETCEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc--c---------cCHHHHHHHHHHHHhCCCEEE-ECCEEEE
Confidence 357999999999999999999999999999999875321 0 123456677788888885552 4678999
Q ss_pred EecCCCE--EEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 137 IDAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 137 id~~~~~--v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
++.+++. +.+.++. +..++.+|.+|+|+|..|+..
T Consensus 247 i~~~~~~~~v~~~~~~-------g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 247 TEVKNKQVTVKFVDAE-------GEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp EEECSSCEEEEEESSS-------EEEEEEESEEEECSCEEECCT
T ss_pred EEEcCCEEEEEEEeCC-------CcEEEECCEEEEeeCCcccCC
Confidence 8876554 4444321 124799999999999998764
No 213
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.97 E-value=3.5e-05 Score=78.05 Aligned_cols=99 Identities=15% Similarity=0.229 Sum_probs=70.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhH-HHHHHhCCCcEEEEEeEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPV-RNIVRKKNVDICFWEAECF 135 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~-~~~~~~~~i~v~~~~~~v~ 135 (583)
..++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+.. ...+ ++++++.++++. ...++.
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------------~~~~~~~~~~~~gv~i~-~~~~v~ 219 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA-----------------SKIMQQRALSNPKIDVI-WNSSVV 219 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------CHHHHHHHHTCTTEEEE-CSEEEE
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc-----------------cHHHHHHHHhCCCeeEe-cCCceE
Confidence 357999999999999999999999999999999875421 1122 244556674432 367888
Q ss_pred EEecCC---C--EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 136 KIDAEN---K--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 136 ~id~~~---~--~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
.++.+. + .|.+.+.. +++..++.+|.||+|+|..|+..
T Consensus 220 ~i~~~~~~~~v~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 262 (333)
T 1vdc_A 220 EAYGDGERDVLGGLKVKNVV-----TGDVSDLKVSGLFFAIGHEPATK 262 (333)
T ss_dssp EEEESSSSSSEEEEEEEETT-----TCCEEEEECSEEEECSCEEESCG
T ss_pred EEeCCCCccceeeEEEEecC-----CCceEEEecCEEEEEeCCccchH
Confidence 998766 3 36665421 11134799999999999988753
No 214
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.97 E-value=1.1e-05 Score=84.02 Aligned_cols=35 Identities=20% Similarity=0.332 Sum_probs=32.4
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~ 93 (583)
.||+|||||++|+++|..|++.|++|+|+||.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 48999999999999999999999999999987654
No 215
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.96 E-value=2.1e-05 Score=83.65 Aligned_cols=97 Identities=23% Similarity=0.472 Sum_probs=68.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc------Ccc------cHHHHHHHHHHH-Hh
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------NMF------DKRITAFAEEKF-SR 290 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il------~~~------~~~~~~~~~~~L-~~ 290 (583)
++|+|||||+.|+.+|..|++.. ++.+|+++++.+.+. |.+ ...+.....+.+ ++
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~------------~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 71 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLK------------PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKK 71 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSSCCC------------------------CTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHHhC------------cCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHh
Confidence 48999999999999999998763 257999999987541 111 111222222334 67
Q ss_pred CCCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 291 DGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 291 ~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
.||+++++++|+.++.+...+.. .+|+ .++.+|.+|+|+|..
T Consensus 72 ~gi~v~~~~~v~~i~~~~~~v~~-~~g~-~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 72 RGIDLHLNAEVIEVDTGYVRVRE-NGGE-KSYEWDYLVFANGAS 113 (449)
T ss_dssp TTCEEETTCEEEEECSSEEEEEC-SSSE-EEEECSEEEECCCEE
T ss_pred cCcEEEecCEEEEEecCCCEEEE-CCce-EEEEcCEEEECCCCC
Confidence 89999999999999987766654 4443 249999999999954
No 216
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.95 E-value=9.9e-06 Score=87.43 Aligned_cols=101 Identities=14% Similarity=0.228 Sum_probs=76.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.- . ...++...+.+.+++.|+++. ...+|+.+
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--~---------~d~~~~~~l~~~l~~~GV~i~-~~~~V~~i 249 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP--Y---------EDADAALVLEESFAERGVRLF-KNARAASV 249 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC--C---------SSHHHHHHHHHHHHHTTCEEE-TTCCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc--c---------cCHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 57999999999999999999989999999999875321 0 122456677788888886653 36688999
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.+...+.+...++ .++.+|.||+|+|..|+..
T Consensus 250 ~~~~~~v~v~~~~g--------~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 250 TRTGAGVLVTMTDG--------RTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp EECSSSEEEEETTS--------CEEEESEEEECCCEEECCS
T ss_pred EEeCCEEEEEECCC--------cEEEcCEEEECCCCCcCCC
Confidence 87654454443221 2799999999999998763
No 217
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.95 E-value=2.8e-05 Score=82.58 Aligned_cols=101 Identities=19% Similarity=0.167 Sum_probs=71.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCc--eEEEEecCCcccC-----c---------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV--KITLLEAADHILN-----M--------------------- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~--~Vtlv~~~~~il~-----~--------------------- 275 (583)
.+|+|||||++|+.+|..|++. +. +|+++++.+.+.. .
T Consensus 7 ~dV~IIGaG~aGl~aA~~L~~~--------------G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~ 72 (447)
T 2gv8_A 7 RKIAIIGAGPSGLVTAKALLAE--------------KAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIV 72 (447)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--------------TCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBC
T ss_pred CEEEEECccHHHHHHHHHHHhc--------------CCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccc
Confidence 4899999999999999999875 45 8999998753210 0
Q ss_pred ----------------------------------------ccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--Ce--EEE
Q 007975 276 ----------------------------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE--IFT 311 (583)
Q Consensus 276 ----------------------------------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~--v~~ 311 (583)
....+.+++.+.+++.++.++++++|++++. +. |++
T Consensus 73 ~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~ 152 (447)
T 2gv8_A 73 GPAALPVYPSPLYRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTY 152 (447)
T ss_dssp CSSSCCBCCCCCCTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEE
T ss_pred cccccCCccCchhhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEE
Confidence 0125567777777777889999999999963 43 333
Q ss_pred EEcCCCe-eEEeecceEEEccCCCCchh
Q 007975 312 KVRGNGE-TSSMPYGMVVWSTGIAPHAI 338 (583)
Q Consensus 312 ~~~~~G~-~~~i~~D~vI~a~G~~~~p~ 338 (583)
.+..+|+ ..++.+|.||+|+|....|.
T Consensus 153 ~~~~~G~~~~~~~~d~VVvAtG~~s~p~ 180 (447)
T 2gv8_A 153 KGTKAGSPISKDIFDAVSICNGHYEVPY 180 (447)
T ss_dssp EESSTTCCEEEEEESEEEECCCSSSSBC
T ss_pred eecCCCCeeEEEEeCEEEECCCCCCCCC
Confidence 3322355 33589999999999744443
No 218
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.94 E-value=1.4e-05 Score=86.10 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=75.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +. ...++...+.+.+++. +++. ...+|+.+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~~---------~d~~~~~~l~~~l~~~-V~i~-~~~~v~~i 240 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVA--NL---------QDEEMKRYAEKTFNEE-FYFD-AKARVIST 240 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCT--TC---------CCHHHHHHHHHHHHTT-SEEE-TTCEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc--cc---------CCHHHHHHHHHHHhhC-cEEE-ECCEEEEE
Confidence 5799999999999999999999999999999987642 11 1224555666777665 6653 47788888
Q ss_pred ecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCC
Q 007975 138 DAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (583)
Q Consensus 138 d~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ 179 (583)
+.+++.+.+.... .+++..++.+|.||+|+|..|+...
T Consensus 241 ~~~~~~v~v~~~~----~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 241 IEKEDAVEVIYFD----KSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp EECSSSEEEEEEC----TTCCEEEEEESEEEECSCCEESCSS
T ss_pred EEcCCEEEEEEEe----CCCceEEEECCEEEEeeCCccCCCC
Confidence 7765544433210 0111248999999999999987653
No 219
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.94 E-value=2e-05 Score=85.23 Aligned_cols=38 Identities=26% Similarity=0.285 Sum_probs=34.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~ 94 (583)
...+|||||||++|++||..|++.|++|+||||.+..+
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~G 77 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWG 77 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 45799999999999999999999999999999987653
No 220
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.94 E-value=5.2e-05 Score=75.85 Aligned_cols=92 Identities=22% Similarity=0.229 Sum_probs=69.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEE-EecCCcc------------cCccc-----HHHHHHHH
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITL-LEAADHI------------LNMFD-----KRITAFAE 285 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtl-v~~~~~i------------l~~~~-----~~~~~~~~ 285 (583)
.+|+|||||+.|+.+|..|++. +.+|++ +++. .+ .|.++ .++..++.
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~--------------g~~v~li~e~~-~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRG--------------GLKNVVMFEKG-MPGGQITSSSEIENYPGVAQVMDGISFMAPWS 69 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--------------TCSCEEEECSS-STTGGGGGCSCBCCSTTCCSCBCHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHC--------------CCCeEEEEeCC-CCCceeeeeceeccCCCCCCCCCHHHHHHHHH
Confidence 4899999999999999999875 578999 9873 21 12222 57888888
Q ss_pred HHHHhCCCEEEeCCeEEEE-eC--CeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 286 EKFSRDGIDVKLGSMVVKV-TD--KEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 286 ~~L~~~GV~v~~~~~V~~v-~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
+.+++.|++++.+ +|+++ ++ +.+.+....++ ++.+|.+|+|+|..
T Consensus 70 ~~~~~~~v~~~~~-~v~~i~~~~~~~~~v~~~~~~---~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 70 EQCMRFGLKHEMV-GVEQILKNSDGSFTIKLEGGK---TELAKAVIVCTGSA 117 (315)
T ss_dssp HHHTTTCCEEECC-CEEEEEECTTSCEEEEETTSC---EEEEEEEEECCCEE
T ss_pred HHHHHcCcEEEEE-EEEEEecCCCCcEEEEEecCC---EEEeCEEEEeeCCC
Confidence 9999999999998 88888 44 44553122223 49999999999953
No 221
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.93 E-value=1.4e-05 Score=85.52 Aligned_cols=99 Identities=21% Similarity=0.339 Sum_probs=74.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC-CCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~-g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~ 136 (583)
.++|+|||+|+.|+.+|..|.+. |.+|+++++.+.+.-.. ...++...+.+.+++.|+++. ...+|+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~----------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~ 227 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF----------TSKSLSQMLRHDLEKNDVVVH-TGEKVVR 227 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT----------SCHHHHHHHHHHHHHTTCEEE-CSCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc----------cCHHHHHHHHHHHHhcCCEEE-eCCEEEE
Confidence 57999999999999999999988 99999999886532101 122456677788888886653 3568999
Q ss_pred EecCCCE--EEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 137 IDAENKK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 137 id~~~~~--v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
++.++.. +.+.++. ++.+|.||+|+|..|+.
T Consensus 228 i~~~~~~v~v~~~~g~----------~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 228 LEGENGKVARVITDKR----------TLDADLVILAAGVSPNT 260 (472)
T ss_dssp EEESSSBEEEEEESSC----------EEECSEEEECSCEEECC
T ss_pred EEccCCeEEEEEeCCC----------EEEcCEEEECCCCCcCH
Confidence 9875554 3443332 89999999999998864
No 222
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.93 E-value=1.6e-05 Score=85.62 Aligned_cols=106 Identities=15% Similarity=0.175 Sum_probs=77.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~ 136 (583)
..++|+|||||+.|+.+|..|.+.|.+|+|+++.+.+... ...++...+.+.+++.++++. ...+|..
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------~d~~~~~~l~~~l~~~gV~v~-~~~~v~~ 264 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG-----------MDGEVAKQLQRMLTKQGIDFK-LGAKVTG 264 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS-----------SCHHHHHHHHHHHHHTTCEEE-CSEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc-----------CCHHHHHHHHHHHHhCCCEEE-ECCeEEE
Confidence 3579999999999999999999999999999988754210 123456677788888886653 4668888
Q ss_pred EecCCCEE--EEecCCCCCCCCCceEEeecCEEEEccCCCCCCCC
Q 007975 137 IDAENKKV--YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (583)
Q Consensus 137 id~~~~~v--~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ 179 (583)
++.++..+ .+.+.. +++..++.+|.||+|+|..|+...
T Consensus 265 i~~~~~~~~v~~~~~~-----~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 265 AVKSGDGAKVTFEPVK-----GGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEEETTEEEEEEEETT-----SCCCEEEEESEEEECCCCEECCTT
T ss_pred EEEeCCEEEEEEEecC-----CCceEEEEcCEEEEeeCCccCCCc
Confidence 88766543 443311 011248999999999999987643
No 223
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.92 E-value=4.4e-05 Score=77.59 Aligned_cols=98 Identities=12% Similarity=0.179 Sum_probs=70.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhH-HHHHHhCCCcEEEEEeEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPV-RNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~-~~~~~~~~i~v~~~~~~v~~ 136 (583)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+.. ...+ ..++++.++++. ...+++.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~-----------------~~~~~~~~~~~~gV~v~-~~~~v~~ 216 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA-----------------SKIMLDRARNNDKIRFL-TNHTVVA 216 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS-----------------CTTHHHHHHHCTTEEEE-CSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc-----------------cHHHHHHHhccCCcEEE-eCceeEE
Confidence 57999999999999999999999999999998865421 0122 244556774442 3678899
Q ss_pred EecCCC--EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 137 IDAENK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 137 id~~~~--~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
++.+.+ .|.+.+.. +++..++.+|.||+|+|..|+..
T Consensus 217 i~~~~~~~~v~~~~~~-----~g~~~~i~~D~vi~a~G~~p~~~ 255 (335)
T 2a87_A 217 VDGDTTVTGLRVRDTN-----TGAETTLPVTGVFVAIGHEPRSG 255 (335)
T ss_dssp EECSSSCCEEEEEEET-----TSCCEEECCSCEEECSCEEECCT
T ss_pred EecCCcEeEEEEEEcC-----CCceEEeecCEEEEccCCccChh
Confidence 987653 46665321 11124799999999999998754
No 224
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.92 E-value=2.5e-05 Score=83.89 Aligned_cols=103 Identities=17% Similarity=0.238 Sum_probs=75.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+++++... ++. ...++...+.+.+++.|+++. ...+|..+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~------l~~------~d~~~~~~l~~~l~~~Gv~i~-~~~~v~~i 253 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIV------LRG------FDQQMAELVAASMEERGIPFL-RKTVPLSV 253 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCS------STT------SCHHHHHHHHHHHHHTTCCEE-ETEEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC------Ccc------cCHHHHHHHHHHHHhCCCEEE-eCCEEEEE
Confidence 57899999999999999999999999999997531 111 122456677788888997763 46788888
Q ss_pred ecCCC---EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 138 DAENK---KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~~---~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+.... .|.+.++. +.+..++.+|.||+|+|..|+..
T Consensus 254 ~~~~~~~~~v~~~~~~-----~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 254 EKQDDGKLLVKYKNVE-----TGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EECTTSCEEEEEEETT-----TCCEEEEEESEEEECSCEEECCG
T ss_pred EEcCCCcEEEEEecCC-----CCceeEEEcCEEEECcccccCcC
Confidence 76432 35555432 11234799999999999988753
No 225
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.91 E-value=2.2e-05 Score=86.02 Aligned_cols=100 Identities=17% Similarity=0.292 Sum_probs=73.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . ...++...+.+.+++.|+++. ...++..+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~---------~~~~~~~~l~~~l~~~GV~i~-~~~~v~~i 218 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT--P---------VDREMAGFAHQAIRDQGVDLR-LGTALSEV 218 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT--T---------SCHHHHHHHHHHHHHTTCEEE-ETCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch--h---------cCHHHHHHHHHHHHHCCCEEE-eCCeEEEE
Confidence 46999999999999999999999999999999864321 1 122455667778888886653 46788888
Q ss_pred ec-------------------CCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DA-------------------ENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~-------------------~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+. ....+.+...+ + .++.+|.||+|+|..|+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-----g---~~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 219 SYQVQTHVASDAAGEDTAHQHIKGHLSLTLSN-----G---ELLETDLLIMAIGVRPET 269 (565)
T ss_dssp EEECCCCCCCGGGTCCCTTCCTTCEEEEEETT-----S---CEEEESEEEECSCEEECC
T ss_pred eccccccccccccccccccccCCCcEEEEEcC-----C---CEEEcCEEEECcCCccch
Confidence 76 34444433222 1 179999999999998874
No 226
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.90 E-value=8.9e-05 Score=74.22 Aligned_cols=92 Identities=22% Similarity=0.264 Sum_probs=69.7
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCc-eEEEEecCCc-----------ccCcc-----cHHHHHHHHHH
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAADH-----------ILNMF-----DKRITAFAEEK 287 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~-~Vtlv~~~~~-----------il~~~-----~~~~~~~~~~~ 287 (583)
+|+|||||+.|+.+|..+++. +. +|+++++... ..+.+ ...+.+++.+.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~--------------g~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 68 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRG--------------GVKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQ 68 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred eEEEECccHHHHHHHHHHHHC--------------CCCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHH
Confidence 799999999999999999874 56 8999998521 01222 25677888888
Q ss_pred HHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 288 FSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 288 L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
+++.|++++. ++|+.++ ++.+++.. .+|++ +.+|.+|+|+|..
T Consensus 69 ~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~g~~--~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 69 CFRFGLKHEM-TAVQRVSKKDSHFVILA-EDGKT--FEAKSVIIATGGS 113 (311)
T ss_dssp HHTTSCEEEC-SCEEEEEEETTEEEEEE-TTSCE--EEEEEEEECCCEE
T ss_pred HHHcCCEEEE-EEEEEEEEcCCEEEEEE-cCCCE--EECCEEEECCCCC
Confidence 8899999998 7888886 34455543 34654 9999999999954
No 227
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.89 E-value=2.4e-05 Score=84.97 Aligned_cols=100 Identities=12% Similarity=0.248 Sum_probs=73.8
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEEe
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKID 138 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id 138 (583)
++|+|||||+.|+.+|..|.+.|.+|+++++.+.+.-. ...++...+.+.+++.|+++. ...+|+.++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-----------~~~~~~~~l~~~l~~~GV~i~-~~~~V~~i~ 282 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI-----------KDNETRAYVLDRMKEQGMEII-SGSNVTRIE 282 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC-----------CSHHHHHHHHHHHHHTTCEEE-SSCEEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc-----------ccHHHHHHHHHHHHhCCcEEE-ECCEEEEEE
Confidence 89999999999999999999999999999998753210 123456677788888886653 467899998
Q ss_pred cCC-CE---EEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 139 AEN-KK---VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 139 ~~~-~~---v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
.+. .. +.+.... ++.++.+|.||+|+|..|+.
T Consensus 283 ~~~~~~v~~~~v~~~~-------G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 283 EDANGRVQAVVAMTPN-------GEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp ECTTSBEEEEEEEETT-------EEEEEECSCEEECCCCEECC
T ss_pred EcCCCceEEEEEEECC-------CcEEEEcCEEEECcCCccCC
Confidence 632 21 3333221 11278999999999999876
No 228
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.88 E-value=1.8e-05 Score=84.36 Aligned_cols=90 Identities=17% Similarity=0.206 Sum_probs=69.4
Q ss_pred hccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc-------cCc--ccHHHHHHHHHHHHhC
Q 007975 221 KRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI-------LNM--FDKRITAFAEEKFSRD 291 (583)
Q Consensus 221 ~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i-------l~~--~~~~~~~~~~~~L~~~ 291 (583)
...++|+|||||+.|+.+|..|++. +.+|+|+++.+.+ +|. ++..+.+...+.+++.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~--------------G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~ 185 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAK--------------GYEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADA 185 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--------------CCeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHC
Confidence 3567999999999999999999875 5789999998875 333 3566777788889999
Q ss_pred CCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 292 GIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 292 GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
||++++++.|. ..+++. ++. +.+|.||+|+|..
T Consensus 186 gv~~~~~~~v~----~~v~~~---~~~---~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 186 GVIYHPNFEVG----RDASLP---ELR---RKHVAVLVATGVY 218 (456)
T ss_dssp TCEEETTCCBT----TTBCHH---HHH---SSCSEEEECCCCC
T ss_pred CcEEEeCCEec----cEEEhh---HhH---hhCCEEEEecCCC
Confidence 99999998763 122221 122 6799999999964
No 229
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.88 E-value=2.2e-05 Score=85.75 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=32.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC---CCCeEEEEcCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNN---PSYDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~---~g~~Vtlie~~~~ 92 (583)
..++|||||||++|+++|..|++ .|++|+|||+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 35799999999999999999998 9999999998753
No 230
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.87 E-value=1.9e-05 Score=80.21 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=33.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC--CCeEEEEcCCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFA 94 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~--g~~Vtlie~~~~~~ 94 (583)
.++|+|||||++|+++|..|++. |++|+|||+++..+
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~G 117 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPG 117 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccC
Confidence 47999999999999999999975 99999999987654
No 231
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.87 E-value=0.00015 Score=77.06 Aligned_cols=98 Identities=16% Similarity=0.314 Sum_probs=71.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC-------------------c---------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN-------------------M--------- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~-------------------~--------- 275 (583)
..|+|||||++|+-+|..+++. +.+|+|+++.+.+.. .
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~--------------G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~ 92 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEE--------------GANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNG 92 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTG
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccCh
Confidence 3899999999999999999874 578999987653210 0
Q ss_pred ----------------------------------c-----cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEc
Q 007975 276 ----------------------------------F-----DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVR 314 (583)
Q Consensus 276 ----------------------------------~-----~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~ 314 (583)
+ ...+.+.+.+.+++.||+++++++|+++. ++.+.....
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~ 172 (447)
T 2i0z_A 93 RFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVIL 172 (447)
T ss_dssp GGGHHHHHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEE
Confidence 0 13445566777888999999999999985 455333333
Q ss_pred CCCeeEEeecceEEEccCCCCch
Q 007975 315 GNGETSSMPYGMVVWSTGIAPHA 337 (583)
Q Consensus 315 ~~G~~~~i~~D~vI~a~G~~~~p 337 (583)
.+|+. +.+|.||+|+|..+.|
T Consensus 173 ~~G~~--i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 173 QTGEV--LETNHVVIAVGGKSVP 193 (447)
T ss_dssp TTCCE--EECSCEEECCCCSSSG
T ss_pred CCCCE--EECCEEEECCCCCcCC
Confidence 45753 9999999999976643
No 232
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.87 E-value=2.9e-05 Score=84.31 Aligned_cols=36 Identities=19% Similarity=0.349 Sum_probs=32.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC------------CCCeEEEEcCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNN------------PSYDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~------------~g~~Vtlie~~~~ 92 (583)
..++|||||||+||+++|..|++ .|++|+|||+.+.
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 35799999999999999999998 8999999998653
No 233
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.86 E-value=2.1e-05 Score=84.79 Aligned_cols=99 Identities=17% Similarity=0.209 Sum_probs=71.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCC----CCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN----PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAE 133 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~----~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~ 133 (583)
.++|+|||||+.|+.+|..|.+ .|.+|+++++.+...... -+..+...+.+.+++.|+++. ...+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~----------l~~~~~~~~~~~l~~~GV~v~-~~~~ 248 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKI----------LPEYLSNWTMEKVRREGVKVM-PNAI 248 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTT----------SCHHHHHHHHHHHHTTTCEEE-CSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccccc----------CCHHHHHHHHHHHHhcCCEEE-eCCE
Confidence 5799999999999999999874 578999999875421111 112445566778888886653 3567
Q ss_pred EEEEecCCCEE--EEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 134 CFKIDAENKKV--YCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 134 v~~id~~~~~v--~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
|+.++.+++.+ .+.++. ++.+|.||+|+|..|+.
T Consensus 249 V~~i~~~~~~~~v~l~dG~----------~i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 249 VQSVGVSSGKLLIKLKDGR----------KVETDHIVAAVGLEPNV 284 (493)
T ss_dssp EEEEEEETTEEEEEETTSC----------EEEESEEEECCCEEECC
T ss_pred EEEEEecCCeEEEEECCCC----------EEECCEEEECCCCCccH
Confidence 88887655543 443322 89999999999999875
No 234
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.85 E-value=2.3e-05 Score=85.65 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=33.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~ 93 (583)
..+|+|||||++|+++|..|++.|++|+|||+++..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 468999999999999999999999999999998654
No 235
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.84 E-value=2e-05 Score=84.61 Aligned_cols=103 Identities=16% Similarity=0.252 Sum_probs=75.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~ 136 (583)
..++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.- . ...++...+.+.+++.|+++. ...+|+.
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-----~------~~~~~~~~l~~~l~~~Gv~i~-~~~~V~~ 257 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR-----N------FDYDLRQLLNDAMVAKGISII-YEATVSQ 257 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-----T------SCHHHHHHHHHHHHHHTCEEE-SSCCEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc-----c------cCHHHHHHHHHHHHHCCCEEE-eCCEEEE
Confidence 357999999999999999999999999999998875321 0 112455667777888886552 3578999
Q ss_pred EecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCC
Q 007975 137 IDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (583)
Q Consensus 137 id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ 179 (583)
++.++..+.+.... + .++.+|.||+|+|..|+...
T Consensus 258 i~~~~~~v~v~~~~-----g---~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 258 VQSTENCYNVVLTN-----G---QTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp EEECSSSEEEEETT-----S---CEEEESEEEECCCEEECCTT
T ss_pred EEeeCCEEEEEECC-----C---cEEEcCEEEEeeCCCcCCCC
Confidence 98765533333222 1 17999999999999887643
No 236
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.84 E-value=3.4e-05 Score=82.73 Aligned_cols=106 Identities=13% Similarity=0.117 Sum_probs=74.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +. ...++...+.+.+++.++++. ...+++.+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~~---------~d~~~~~~~~~~l~~~gv~i~-~~~~v~~i 254 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL--RS---------FDSMISTNCTEELENAGVEVL-KFSQVKEV 254 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--TT---------SCHHHHHHHHHHHHHTTCEEE-TTEEEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc--cc---------cCHHHHHHHHHHHHHCCCEEE-eCCEEEEE
Confidence 5799999999999999999999999999999886532 11 122455667788888886653 35678888
Q ss_pred ecCC-C-EEEEecCCCCCCCCCce--EEeecCEEEEccCCCCCCC
Q 007975 138 DAEN-K-KVYCRSSQNTNLNGKEE--FCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 138 d~~~-~-~v~~~~~~~~~~~~~~~--~~i~yD~LViAtG~~~~~~ 178 (583)
+... . .+.+..... ..++. ..+.+|.||+|+|..|+..
T Consensus 255 ~~~~~~~~~~v~~~~~---~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 255 KKTLSGLEVSMVTAVP---GRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp EECSSSEEEEEEECCT---TSCCEEEEEEEESEEEECSCEEESCT
T ss_pred EEcCCCcEEEEEEccC---CCCcccceEEEcCEEEEeeccccCCC
Confidence 7643 2 233322110 00111 4799999999999998764
No 237
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.83 E-value=3.8e-05 Score=82.59 Aligned_cols=104 Identities=14% Similarity=0.108 Sum_probs=74.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~ 136 (583)
..++|+|||||+.|+.+|..|++.|.+|+++++... ++. ...++...+.+.+++.++++. ....+..
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~------l~~------~d~~~~~~l~~~l~~~gv~~~-~~~~v~~ 250 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP------LRG------FDQQMSSLVTEHMESHGTQFL-KGCVPSH 250 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS------STT------SCHHHHHHHHHHHHHTTCEEE-ETEEEEE
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc------ccc------CCHHHHHHHHHHHHHCCCEEE-eCCEEEE
Confidence 356899999999999999999999999999998631 111 123456677788888887663 4667888
Q ss_pred EecC-CC--EEEEecCCCCCCCCCceEEeecCEEEEccCCCCCCC
Q 007975 137 IDAE-NK--KVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTF 178 (583)
Q Consensus 137 id~~-~~--~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~ 178 (583)
+... +. .+.+.+.. +++..++.+|.||+|+|..|+..
T Consensus 251 i~~~~~~~~~v~~~~~~-----~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 251 IKKLPTNQLQVTWEDHA-----SGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp EEECTTSCEEEEEEETT-----TTEEEEEEESEEEECSCEEESCG
T ss_pred EEEcCCCcEEEEEEeCC-----CCeeEEEECCEEEEcccCCcccC
Confidence 8652 22 35554421 12233689999999999988764
No 238
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.82 E-value=7e-05 Score=79.77 Aligned_cols=101 Identities=16% Similarity=0.218 Sum_probs=69.5
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc-------Cc---------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL-------NM--------------------- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il-------~~--------------------- 275 (583)
.+|+|||||++|+.+|..|++..... ...+|+|+++.+.+. +.
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~---------~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 101 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQ---------GALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPY 101 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHH---------CCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTT
T ss_pred CCEEEECCCHHHHHHHHHHHhccccc---------CcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCC
Confidence 38999999999999999998864200 005899999887421 00
Q ss_pred -----------------------ccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC----Ce---EEEEEc-CCCeeEEeec
Q 007975 276 -----------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVTD----KE---IFTKVR-GNGETSSMPY 324 (583)
Q Consensus 276 -----------------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~----~~---v~~~~~-~~G~~~~i~~ 324 (583)
...++.+++....++.+++++++++|++++. ++ +++... .+|+..++.+
T Consensus 102 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~ 181 (463)
T 3s5w_A 102 SFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTT 181 (463)
T ss_dssp SHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEE
T ss_pred ChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEe
Confidence 0234556666666777999999999999864 22 233321 1244345999
Q ss_pred ceEEEccCC
Q 007975 325 GMVVWSTGI 333 (583)
Q Consensus 325 D~vI~a~G~ 333 (583)
|.||+|+|.
T Consensus 182 d~lVlAtG~ 190 (463)
T 3s5w_A 182 RALVVSPGG 190 (463)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999995
No 239
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.82 E-value=9.2e-06 Score=85.90 Aligned_cols=96 Identities=21% Similarity=0.282 Sum_probs=68.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc--c---------cHHHHHHHHHHHHhCC
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM--F---------DKRITAFAEEKFSRDG 292 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~--~---------~~~~~~~~~~~L~~~G 292 (583)
++|+|||||+.|+.+|..|+++. .+.+|+||++.+.+... + ...+...+.+.+++.|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~------------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 70 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CCEEEECccHHHHHHHHHHHcCC------------CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC
Confidence 38999999999999999998842 26899999998875321 1 0111122334566789
Q ss_pred CEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 293 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
|+++.+ +|+.++.+.-++.. .+|++ +.+|.+|+|+|..+
T Consensus 71 v~~~~~-~v~~id~~~~~v~~-~~g~~--i~~d~liiAtG~~~ 109 (430)
T 3h28_A 71 IEFINE-KAESIDPDANTVTT-QSGKK--IEYDYLVIATGPKL 109 (430)
T ss_dssp EEEECS-CEEEEETTTTEEEE-TTCCE--EECSEEEECCCCEE
T ss_pred CEEEEE-EEEEEECCCCEEEE-CCCcE--EECCEEEEcCCccc
Confidence 999975 89999865433332 34654 99999999999643
No 240
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.81 E-value=0.00019 Score=78.56 Aligned_cols=55 Identities=25% Similarity=0.208 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhCCCEEEeCCeEEEEe--C-Ce---EEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 280 ITAFAEEKFSRDGIDVKLGSMVVKVT--D-KE---IFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 280 ~~~~~~~~L~~~GV~v~~~~~V~~v~--~-~~---v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
+.+.+.+.+++.||+|+++++|+++. + +. |++.+ .+|+..++.+|.||+|+|...
T Consensus 252 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 252 IIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHG-KHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEE-TTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEe-CCCcEEEEEcCEEEEecCCcc
Confidence 44566677788999999999999985 3 33 34443 357655699999999999543
No 241
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.81 E-value=5.1e-05 Score=82.28 Aligned_cols=104 Identities=16% Similarity=0.238 Sum_probs=70.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+|||+++... ++. ...++...+.+.+++.|+++. ...+++.+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~------l~~------~d~~~~~~~~~~l~~~GV~v~-~~~~v~~v 276 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL------LRG------FDQDMANKIGEHMEEHGIKFI-RQFVPIKV 276 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS------STT------SCHHHHHHHHHHHHHTTCEEE-ESEEEEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccc------ccc------CCHHHHHHHHHHHHHCCCEEE-eCCeEEEE
Confidence 56899999999999999999999999999997521 111 123456677788888886653 34455555
Q ss_pred ecCC----CE--EEEecCCCCCCCCCceEEeecCEEEEccCCCCCCCC
Q 007975 138 DAEN----KK--VYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (583)
Q Consensus 138 d~~~----~~--v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ 179 (583)
.... .. +.+.... +.+..++.+|.||+|+|..|+...
T Consensus 277 ~~~~~~~~~~~~v~~~~~~-----g~~~~~~~~D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 277 EQIEAGTPGRLRVVAQSTN-----SEEIIEGEYNTVMLAIGRDACTRK 319 (519)
T ss_dssp EEEECCTTCEEEEEEEESS-----SSCEEEEEESEEEECSCEEESCSS
T ss_pred EEccCCCCceEEEEEEECC-----CcEEEEEECCEEEEecCCcccCCC
Confidence 4321 23 3333222 112246789999999999987643
No 242
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.80 E-value=8.7e-05 Score=77.34 Aligned_cols=94 Identities=19% Similarity=0.272 Sum_probs=69.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc------------------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------------------------------ 273 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il------------------------------ 273 (583)
.+|+|||||++|+.+|..|++. +.+|+|+|+.+.+.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~--------------G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 72 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQ--------------GHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGG 72 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTC
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCC
Confidence 3899999999999999999875 45677777654320
Q ss_pred -------------------------C-----cccHHHHHHHHHHHHhC-CCEEEeCCeEEEEeC--CeE--EEEEcCCCe
Q 007975 274 -------------------------N-----MFDKRITAFAEEKFSRD-GIDVKLGSMVVKVTD--KEI--FTKVRGNGE 318 (583)
Q Consensus 274 -------------------------~-----~~~~~~~~~~~~~L~~~-GV~v~~~~~V~~v~~--~~v--~~~~~~~G~ 318 (583)
+ .....+.+.+.+.+++. ||+++++++|++++. +++ .+.. .+|+
T Consensus 73 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~-~~g~ 151 (399)
T 2x3n_A 73 RVRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRL-NDGR 151 (399)
T ss_dssp EEECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEE-TTSC
T ss_pred CcceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEE-CCCC
Confidence 0 01135566777778887 999999999999963 455 5543 4576
Q ss_pred eEEeecceEEEccCCC
Q 007975 319 TSSMPYGMVVWSTGIA 334 (583)
Q Consensus 319 ~~~i~~D~vI~a~G~~ 334 (583)
+ +.+|.||.|.|..
T Consensus 152 ~--~~ad~vV~AdG~~ 165 (399)
T 2x3n_A 152 V--LRPRVVVGADGIA 165 (399)
T ss_dssp E--EEEEEEEECCCTT
T ss_pred E--EECCEEEECCCCC
Confidence 4 9999999999953
No 243
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.79 E-value=0.00011 Score=79.82 Aligned_cols=97 Identities=21% Similarity=0.265 Sum_probs=73.9
Q ss_pred ceEEEEcCChhHHHHHHHHH-HhhhHhHhhhcCCCCCCceEEEEecCCccc--------Cc-------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELH-DFVDEDLFKLYPKVKDSVKITLLEAADHIL--------NM------------------- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~-~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il--------~~------------------- 275 (583)
.+|+|||||++|+.+|..|. +. +.+|+|+++.+.+. |.
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~--------------G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~ 74 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHEL--------------GLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLL 74 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcC--------------CCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccc
Confidence 48999999999999999998 53 57999999976432 00
Q ss_pred ----------ccHHHHHHHHHHHHhCCC--EEEeCCeEEEEe--CC--eEEEEEcCCCeeEEeecceEEEccCCCCch
Q 007975 276 ----------FDKRITAFAEEKFSRDGI--DVKLGSMVVKVT--DK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHA 337 (583)
Q Consensus 276 ----------~~~~~~~~~~~~L~~~GV--~v~~~~~V~~v~--~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p 337 (583)
..+++.+++.+.+++.|+ +++++++|++++ ++ ..++.. .+|++ +.+|.||+|+|....|
T Consensus 75 ~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~-~~G~~--i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 75 QESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTT-DHGEV--YRAKYVVNAVGLLSAI 149 (540)
T ss_dssp HHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEE-TTSCE--EEEEEEEECCCSCCSB
T ss_pred cCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEE-cCCCE--EEeCEEEECCcccccC
Confidence 124677888888899999 899999999985 22 344443 45764 8999999999964444
No 244
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.79 E-value=0.00012 Score=79.28 Aligned_cols=96 Identities=17% Similarity=0.199 Sum_probs=72.7
Q ss_pred cceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCC--ccc-----------C-cccHHHHHHHHHHH
Q 007975 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD--HIL-----------N-MFDKRITAFAEEKF 288 (583)
Q Consensus 223 ~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~--~il-----------~-~~~~~~~~~~~~~L 288 (583)
..+|+|||||+.|+.+|..+++. +.+|++++... ... + ...+.+.+.+.+.+
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~--------------G~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 277 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARK--------------GIRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHV 277 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHH
T ss_pred cccEEEECCcHHHHHHHHHHHhC--------------CCeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHH
Confidence 45899999999999999999874 57899997531 111 0 12457788888889
Q ss_pred HhCCCEEEeCCeEEEEeCC-----eEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 289 SRDGIDVKLGSMVVKVTDK-----EIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 289 ~~~GV~v~~~~~V~~v~~~-----~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
++.||+++.+++|+.++.+ ...+.. .+|+. +.+|.||+|+|..+
T Consensus 278 ~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~-~~g~~--~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 278 SDYDVDVIDSQSASKLVPAATEGGLHQIET-ASGAV--LKARSIIIATGAKW 326 (521)
T ss_dssp HTSCEEEECSCCEEEEECCSSTTSCEEEEE-TTSCE--EEEEEEEECCCEEE
T ss_pred HHcCCEEEcCCEEEEEEeccCCCceEEEEE-CCCCE--EEcCEEEECCCCCc
Confidence 9999999999999999642 444443 45654 99999999999543
No 245
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.78 E-value=0.00016 Score=75.17 Aligned_cols=97 Identities=19% Similarity=0.260 Sum_probs=70.3
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc----------c-C-------------------
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI----------L-N------------------- 274 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i----------l-~------------------- 274 (583)
+|+|||||++|+.+|..|++. +.+|+|+|+.+.. + +
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~ 69 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKA--------------GIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG 69 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHH--------------TCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC
T ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC
Confidence 799999999999999999885 4688888876531 0 0
Q ss_pred ------------------------c------ccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC---CeEEEEEcCCCeeEE
Q 007975 275 ------------------------M------FDKRITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIFTKVRGNGETSS 321 (583)
Q Consensus 275 ------------------------~------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~~v~~~~~~~G~~~~ 321 (583)
. ....+.+.+.+.+.+.|++++.+++|++++. +.+.+....+|+..+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~ 149 (394)
T 1k0i_A 70 LVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLR 149 (394)
T ss_dssp EEESCEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEE
T ss_pred CccceEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEE
Confidence 0 0133455667777788999999999999964 234443213576445
Q ss_pred eecceEEEccCCCC
Q 007975 322 MPYGMVVWSTGIAP 335 (583)
Q Consensus 322 i~~D~vI~a~G~~~ 335 (583)
+.+|.||.|.|...
T Consensus 150 ~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 150 LDCDYIAGCDGFHG 163 (394)
T ss_dssp EECSEEEECCCTTC
T ss_pred EEeCEEEECCCCCc
Confidence 99999999999543
No 246
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.78 E-value=8.3e-05 Score=81.10 Aligned_cols=94 Identities=18% Similarity=0.297 Sum_probs=72.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC---------------------c-------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN---------------------M------- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~---------------------~------- 275 (583)
.+|+|||||++|+.+|..|.+. +.+|+|+++.+.+.. .
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~--------------G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~ 87 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQ--------------GLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQ 87 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCccccCCCCCceeCCCchhccccccccccc
Confidence 4899999999999999999874 579999998654320 0
Q ss_pred ---------ccHHHHHHHHHHHHhCCC--EEEeCCeEEEEe--CC--eEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 276 ---------FDKRITAFAEEKFSRDGI--DVKLGSMVVKVT--DK--EIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 276 ---------~~~~~~~~~~~~L~~~GV--~v~~~~~V~~v~--~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
..+++.+++.+.+++.|+ +++++++|++++ ++ ..++.. .+|++ +.+|.||+|+|..
T Consensus 88 ~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~-~~G~~--i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 88 EWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRT-DRGDE--VSARFLVVAAGPL 158 (549)
T ss_dssp HCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEE-TTCCE--EEEEEEEECCCSE
T ss_pred CCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEE-CCCCE--EEeCEEEECcCCC
Confidence 124677888888899998 899999999985 33 344443 45765 9999999999953
No 247
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.77 E-value=0.00017 Score=79.24 Aligned_cols=58 Identities=12% Similarity=0.028 Sum_probs=43.9
Q ss_pred cHHHHHHHHHHHHhCCCEEEeCCeEEEEe---CCe---EEEEEcCCCeeEEeecceEEEccCCC
Q 007975 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVT---DKE---IFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 277 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~---~~~---v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
+..+...+.+.+++.||+|++++.|+++. ++. |.+.+..+|+..++.++.||+|+|-.
T Consensus 142 g~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 142 GHALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp HHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 35677778888888999999999999985 233 34444356765569999999999953
No 248
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.73 E-value=9.5e-05 Score=80.45 Aligned_cols=35 Identities=29% Similarity=0.361 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~ 93 (583)
..+|||||||++|++||..|++ |.+|+||||.+..
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~ 42 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVT 42 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTT
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCC
Confidence 4799999999999999999999 9999999998653
No 249
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.72 E-value=0.00011 Score=79.96 Aligned_cols=97 Identities=15% Similarity=0.216 Sum_probs=73.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc-------------------------C----
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL-------------------------N---- 274 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il-------------------------~---- 274 (583)
.+|+|||||++|+.+|..|.+. +.+|+|+++.+.+. +
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~--------------g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~ 75 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQA--------------GMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIP 75 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSST
T ss_pred CCEEEECccHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCccccc
Confidence 4899999999999999999864 57899999986431 0
Q ss_pred --------cccHHHHHHHHHHHHhCCC--EEEeCCeEEEEeC--C--eEEEEEcCCCeeEEeecceEEEccCCCCch
Q 007975 275 --------MFDKRITAFAEEKFSRDGI--DVKLGSMVVKVTD--K--EIFTKVRGNGETSSMPYGMVVWSTGIAPHA 337 (583)
Q Consensus 275 --------~~~~~~~~~~~~~L~~~GV--~v~~~~~V~~v~~--~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p 337 (583)
...+++.+++.+..++.|+ +++++++|++++- + ..++.. .+|++ +.+|.||+|+|....|
T Consensus 76 ~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~-~~G~~--~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 76 EWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTL-DNEEV--VTCRFLISATGPLSAS 149 (545)
T ss_dssp TCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEE-TTTEE--EEEEEEEECCCSCBC-
T ss_pred CCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEE-CCCCE--EEeCEEEECcCCCCCC
Confidence 0135777888888888888 8999999999852 2 334443 45764 9999999999954444
No 250
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.72 E-value=0.00018 Score=78.94 Aligned_cols=56 Identities=16% Similarity=0.152 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeEEEEe--C-Ce---EEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 279 RITAFAEEKFSRDGIDVKLGSMVVKVT--D-KE---IFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 279 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~-~~---v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
.+.+.+.+.+++.||+|+++++|+++. + +. |++.+ .+|+..++.+|.||+|+|...
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~-~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 256 HVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKG-MYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEE-TTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEe-CCCcEEEEECCeEEEeCCCcc
Confidence 445566677788999999999999985 3 33 44443 257655699999999999543
No 251
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.72 E-value=5.6e-05 Score=80.64 Aligned_cols=102 Identities=13% Similarity=0.179 Sum_probs=74.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFK 136 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~ 136 (583)
..++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. +. ...++...+.+.+++.|+++. ...+|..
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l--~~---------~~~~~~~~l~~~l~~~Gv~i~-~~~~v~~ 236 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL--SR---------FDQDMRRGLHAAMEEKGIRIL-CEDIIQS 236 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--TT---------SCHHHHHHHHHHHHHTTCEEE-CSCCEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc--cc---------cCHHHHHHHHHHHHHCCCEEE-CCCEEEE
Confidence 36799999999999999999999999999999887532 11 122456677788888886653 3578888
Q ss_pred EecCC-CEEEEe-cCCCCCCCCCceEEeecCEEEEccCCCCCCCC
Q 007975 137 IDAEN-KKVYCR-SSQNTNLNGKEEFCMDYDYLVIAMGARANTFN 179 (583)
Q Consensus 137 id~~~-~~v~~~-~~~~~~~~~~~~~~i~yD~LViAtG~~~~~~~ 179 (583)
++.+. +.+.+. ... + ++.+|.||+|+|..|+...
T Consensus 237 i~~~~~~~~~v~~~~~-------g--~i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 237 VSADADGRRVATTMKH-------G--EIVADQVMLALGRMPNTNG 272 (463)
T ss_dssp EEECTTSCEEEEESSS-------C--EEEESEEEECSCEEESCTT
T ss_pred EEEcCCCEEEEEEcCC-------C--eEEeCEEEEeeCcccCCCC
Confidence 88763 323333 221 1 3899999999999887653
No 252
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.72 E-value=0.00025 Score=71.73 Aligned_cols=91 Identities=16% Similarity=0.266 Sum_probs=64.3
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc--------------------CcccHHHHHHH
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--------------------NMFDKRITAFA 284 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il--------------------~~~~~~~~~~~ 284 (583)
+|+|||||++|+.+|..|++. +.+|+|+|+.+.+. ....+.+.+.+
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~--------------G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAA--------------GHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV 69 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH
T ss_pred eEEEECCcHHHHHHHHHHHHC--------------CCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH
Confidence 899999999999999999875 57999999876431 01112222222
Q ss_pred H-------------------------------------------HHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCee
Q 007975 285 E-------------------------------------------EKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGET 319 (583)
Q Consensus 285 ~-------------------------------------------~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~ 319 (583)
. +.|. .|++|+++++|++++ ++++++.. .+|+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~-~~g~~ 147 (336)
T 1yvv_A 70 KQWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLD-AEGQN 147 (336)
T ss_dssp HHHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEE-TTSCE
T ss_pred HHHHhCCCeeeccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEe-CCCcC
Confidence 2 2222 289999999999996 45677664 55664
Q ss_pred EEeecceEEEccC
Q 007975 320 SSMPYGMVVWSTG 332 (583)
Q Consensus 320 ~~i~~D~vI~a~G 332 (583)
...+|.||.|+|
T Consensus 148 -~~~a~~vV~a~g 159 (336)
T 1yvv_A 148 -HGPFSHVIIATP 159 (336)
T ss_dssp -EEEESEEEECSC
T ss_pred -ccccCEEEEcCC
Confidence 235999999999
No 253
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.69 E-value=0.00018 Score=75.39 Aligned_cols=96 Identities=17% Similarity=0.314 Sum_probs=70.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc--------cCc--------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI--------LNM-------------------- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i--------l~~-------------------- 275 (583)
.+|+|||||++|+-+|..|++. +.+|+|+|+.+.. .+.
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~--------------G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~ 71 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKS--------------GFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQ 71 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--------------TCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCE
T ss_pred CcEEEECCCHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCc
Confidence 3899999999999999999874 5788888876410 000
Q ss_pred -------------------------------c-cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCe--EEEEEcCCCee
Q 007975 276 -------------------------------F-DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKE--IFTKVRGNGET 319 (583)
Q Consensus 276 -------------------------------~-~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~--v~~~~~~~G~~ 319 (583)
+ ...+.+.+.+.+++.|++++.+++|++++ +++ +.+.. .+|+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~-~~g~~ 150 (421)
T 3nix_A 72 QKFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIED-INGNK 150 (421)
T ss_dssp EECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEE-TTSCE
T ss_pred ccCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEc-CCCCE
Confidence 0 12455667777778899999999999986 344 33433 56775
Q ss_pred EEeecceEEEccCCC
Q 007975 320 SSMPYGMVVWSTGIA 334 (583)
Q Consensus 320 ~~i~~D~vI~a~G~~ 334 (583)
.++.+|.||.|+|..
T Consensus 151 ~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 151 REIEARFIIDASGYG 165 (421)
T ss_dssp EEEEEEEEEECCGGG
T ss_pred EEEEcCEEEECCCCc
Confidence 569999999999943
No 254
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.69 E-value=0.0002 Score=71.76 Aligned_cols=94 Identities=16% Similarity=0.146 Sum_probs=68.9
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCc---cc--------Cc----ccHHHHHHHHHHHH
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH---IL--------NM----FDKRITAFAEEKFS 289 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~---il--------~~----~~~~~~~~~~~~L~ 289 (583)
.|+||||||.|+.+|..+++. +.+|+|+++... ++ |. ..+++.........
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~--------------g~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 73 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRA--------------NLKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAK 73 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHh
Confidence 799999999999999999875 579999997531 11 21 13567777778888
Q ss_pred hCCCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 290 RDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 290 ~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
+.++.+..+..+............ .++++ +.+|.+|+|||.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 74 KFGAVYQYGDIKSVEDKGEYKVIN-FGNKE--LTAKAVIIATGAEY 116 (312)
T ss_dssp HTTCEEEECCCCEEEECSSCEEEE-CSSCE--EEEEEEEECCCEEE
T ss_pred hccccccceeeeeeeeeecceeec-cCCeE--EEeceeEEcccCcc
Confidence 889999888777766554333333 23554 99999999999543
No 255
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.69 E-value=0.00015 Score=72.69 Aligned_cols=93 Identities=17% Similarity=0.178 Sum_probs=66.7
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCc--------c--------cCc-----ccHHHHHH
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH--------I--------LNM-----FDKRITAF 283 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~--------i--------l~~-----~~~~~~~~ 283 (583)
.|+||||||.|+.+|..+++. +.+|+++++.+. + .|. ..+++.+.
T Consensus 6 DvvIIG~GpAGl~AA~~la~~--------------g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRS--------------SLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMN 71 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHH
Confidence 799999999999999998875 578999987542 0 011 12567788
Q ss_pred HHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 284 AEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 284 ~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
..+.+++.++++...+ +..+. .+...... .++.+ +.+|.+|+|||..+
T Consensus 72 ~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~-~~~~~--~~~~~liiATG~~~ 121 (314)
T 4a5l_A 72 MRTQSEKYGTTIITET-IDHVDFSTQPFKLFT-EEGKE--VLTKSVIIATGATA 121 (314)
T ss_dssp HHHHHHHTTCEEECCC-EEEEECSSSSEEEEE-TTCCE--EEEEEEEECCCEEE
T ss_pred HHHHHhhcCcEEEEeE-EEEeecCCCceEEEE-CCCeE--EEEeEEEEcccccc
Confidence 8888999999988765 44443 23333333 34554 99999999999654
No 256
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.68 E-value=1.4e-05 Score=86.29 Aligned_cols=40 Identities=20% Similarity=0.184 Sum_probs=36.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC-CCCeEEEEcCCCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYFAFT 96 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~-~g~~Vtlie~~~~~~~~ 96 (583)
+..+|||||||++||+||+.|++ .|++|+|+|+++..++.
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGL 49 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCC
Confidence 35799999999999999999985 69999999999988874
No 257
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.68 E-value=0.00016 Score=75.28 Aligned_cols=100 Identities=14% Similarity=0.199 Sum_probs=68.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc------ccHHHHH---------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM------FDKRITA--------------- 282 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~------~~~~~~~--------------- 282 (583)
.+|+|||||++|+.+|..|++. +.+|+|+|+.+..... +.+...+
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~ 71 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDA--------------GVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVP 71 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBC
T ss_pred CcEEEECCCHHHHHHHHHHHhC--------------CCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcccccccc
Confidence 4899999999999999999875 5789999887653111 1222111
Q ss_pred ----------------------------HHHHHHHh--CCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEc
Q 007975 283 ----------------------------FAEEKFSR--DGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWS 330 (583)
Q Consensus 283 ----------------------------~~~~~L~~--~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a 330 (583)
.+.+.|.+ .|++++++++|++++ ++++++.. .+|++ +.+|.||.|
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~--~~ad~vV~A 148 (397)
T 2vou_A 72 SSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRF-SDGTK--AEANWVIGA 148 (397)
T ss_dssp CCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEE-TTSCE--EEESEEEEC
T ss_pred ccceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEE-CCCCE--EECCEEEEC
Confidence 12222322 389999999999995 45666654 45764 999999999
Q ss_pred cCCCCchhHHHH
Q 007975 331 TGIAPHAIIKDF 342 (583)
Q Consensus 331 ~G~~~~p~~~~l 342 (583)
.|. ...+...
T Consensus 149 dG~--~S~vr~~ 158 (397)
T 2vou_A 149 DGG--ASVVRKR 158 (397)
T ss_dssp CCT--TCHHHHH
T ss_pred CCc--chhHHHH
Confidence 994 4444444
No 258
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.67 E-value=6e-05 Score=77.89 Aligned_cols=43 Identities=21% Similarity=0.235 Sum_probs=37.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC-CCCCCCCc
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR-NYFAFTPL 98 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~-~~~~~~p~ 98 (583)
...++|+|||||++||+||..|.+.|++|+|+|++ +..++...
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIK 85 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCcee
Confidence 45679999999999999999999999999999999 77766543
No 259
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.66 E-value=0.00015 Score=76.97 Aligned_cols=96 Identities=21% Similarity=0.200 Sum_probs=69.5
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc-------------------------------
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------------------------------- 273 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il------------------------------- 273 (583)
+|+|||||++|+-+|..|++. +.+|+|+++.+...
T Consensus 8 dVvIVGaG~aGl~aA~~La~~--------------G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~ 73 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRR--------------GLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENK 73 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSS--------------SCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhh
Confidence 899999999999999998764 46777777654310
Q ss_pred -----------------Cc----c-cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeE---EEEEcCCCeeEEeecce
Q 007975 274 -----------------NM----F-DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEI---FTKVRGNGETSSMPYGM 326 (583)
Q Consensus 274 -----------------~~----~-~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v---~~~~~~~G~~~~i~~D~ 326 (583)
+. + ...+.+.+.+.+++.||+++.+++|++++ ++.+ ++.+..+|+..++.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~ 153 (453)
T 3atr_A 74 INGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKV 153 (453)
T ss_dssp EEEEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSE
T ss_pred hcceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCE
Confidence 00 0 13466777778888999999999999985 4454 34331157644699999
Q ss_pred EEEccCCC
Q 007975 327 VVWSTGIA 334 (583)
Q Consensus 327 vI~a~G~~ 334 (583)
||.|.|..
T Consensus 154 VV~AdG~~ 161 (453)
T 3atr_A 154 VVEATGYS 161 (453)
T ss_dssp EEECCGGG
T ss_pred EEECcCCc
Confidence 99999954
No 260
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.65 E-value=7.4e-05 Score=75.41 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=32.7
Q ss_pred CeEEEECCcHHHHHHHHhcCCC--CCeEEEEcCCCCCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYFA 94 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~--g~~Vtlie~~~~~~ 94 (583)
.+|+|||||++|+++|..|++. |++|+|+|+++..+
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~g 103 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccc
Confidence 4899999999999999999976 99999999987664
No 261
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=97.63 E-value=7.4e-05 Score=82.41 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCC--CeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g--~~Vtlie~~~ 91 (583)
..+|||||||++|+++|..|++.| .+|+|||+.+
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 469999999999999999999888 9999999974
No 262
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=97.62 E-value=0.00015 Score=74.87 Aligned_cols=53 Identities=17% Similarity=0.139 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 278 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
..+.+.+.+.+++.|++++.+++|++++. +.+.+.. .+| ++.+|.||+|+|..
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~-~~g---~~~a~~vV~A~G~~ 218 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKT-PSG---DVWANHVVVASGVW 218 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEE-TTE---EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEc-CCc---eEEcCEEEECCChh
Confidence 34667777888889999999999999963 4464443 334 39999999999954
No 263
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.62 E-value=0.00021 Score=73.81 Aligned_cols=52 Identities=23% Similarity=0.139 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEE-EEEcCCCeeEEeecceEEEccCCC
Q 007975 279 RITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIF-TKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 279 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~-~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
.+.+.+.+.+++.|++++.+++|++++ ++.++ +.. .+| ++.+|.||+|+|..
T Consensus 150 ~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~-~~g---~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 150 EATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKT-NKG---IIKTGIVVNATNAW 204 (382)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEE-TTE---EEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEE-CCc---EEECCEEEECcchh
Confidence 344556677888999999999999986 34555 443 445 39999999999953
No 264
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.61 E-value=0.00026 Score=77.74 Aligned_cols=93 Identities=17% Similarity=0.186 Sum_probs=67.6
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCc-cc-----------------------Cc-----
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH-IL-----------------------NM----- 275 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~-il-----------------------~~----- 275 (583)
.|+|||||+.|+++|..+++. +.+|+|+++.+. +. ..
T Consensus 30 DVIVIGgG~AGl~AAlaLAr~--------------G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 30 DVIIIGGGHAGTEAAMAAARM--------------GQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CEEEECChHHHHHHHHHHHhC--------------CCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHH
Confidence 899999999999999999885 578999997631 10 00
Q ss_pred -------------------------cc-HHHHHHHHHHHHh-CCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecce
Q 007975 276 -------------------------FD-KRITAFAEEKFSR-DGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGM 326 (583)
Q Consensus 276 -------------------------~~-~~~~~~~~~~L~~-~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~ 326 (583)
.+ ..+.+.+.+.+++ .||+++ +++|+++. ++.+....+.+|.. +.+|.
T Consensus 96 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~--I~Ad~ 172 (651)
T 3ces_A 96 IDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLK--FRAKA 172 (651)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEE--EEEEE
T ss_pred hhhcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCE--EECCE
Confidence 01 1355666777877 699994 67899984 45554333355754 99999
Q ss_pred EEEccCCC
Q 007975 327 VVWSTGIA 334 (583)
Q Consensus 327 vI~a~G~~ 334 (583)
||+|+|..
T Consensus 173 VVLATGt~ 180 (651)
T 3ces_A 173 VVLTVGTF 180 (651)
T ss_dssp EEECCSTT
T ss_pred EEEcCCCC
Confidence 99999964
No 265
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.61 E-value=0.0003 Score=73.58 Aligned_cols=102 Identities=22% Similarity=0.344 Sum_probs=69.8
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCce-EEEEecCCcccCc----------------------------
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVK-ITLLEAADHILNM---------------------------- 275 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~-Vtlv~~~~~il~~---------------------------- 275 (583)
+|+|||||++|+-+|..|++. +.+ |+|+|+.+.+.+.
T Consensus 6 dVvIVGaG~aGl~~A~~L~~~--------------G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~ 71 (410)
T 3c96_A 6 DILIAGAGIGGLSCALALHQA--------------GIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAI 71 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSE
T ss_pred eEEEECCCHHHHHHHHHHHhC--------------CCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCC
Confidence 899999999999999999875 467 8888776542100
Q ss_pred ---------------------------------ccHHHHHHHHHHHHh-CC-CEEEeCCeEEEEe-CCeEEEEEc--CCC
Q 007975 276 ---------------------------------FDKRITAFAEEKFSR-DG-IDVKLGSMVVKVT-DKEIFTKVR--GNG 317 (583)
Q Consensus 276 ---------------------------------~~~~~~~~~~~~L~~-~G-V~v~~~~~V~~v~-~~~v~~~~~--~~G 317 (583)
....+.+.+.+.+++ .| ++++++++|++++ ++++++... .+|
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~g 151 (410)
T 3c96_A 72 PTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHG 151 (410)
T ss_dssp EECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETTS
T ss_pred CcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCCC
Confidence 012345566666665 36 6999999999986 344544432 236
Q ss_pred eeEEeecceEEEccCCCCchhHHHH
Q 007975 318 ETSSMPYGMVVWSTGIAPHAIIKDF 342 (583)
Q Consensus 318 ~~~~i~~D~vI~a~G~~~~p~~~~l 342 (583)
+..++.+|.||.|.|. ...+...
T Consensus 152 ~~~~~~ad~vV~AdG~--~S~vR~~ 174 (410)
T 3c96_A 152 KPQALGADVLVGADGI--HSAVRAH 174 (410)
T ss_dssp CEEEEEESEEEECCCT--TCHHHHH
T ss_pred CceEEecCEEEECCCc--cchhHHH
Confidence 4345999999999994 4444443
No 266
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.61 E-value=7.2e-05 Score=80.67 Aligned_cols=102 Identities=13% Similarity=0.249 Sum_probs=71.7
Q ss_pred CeEEEECCcHHHHHHHHhcCC--------------CCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNN--------------PSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKN 124 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~--------------~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~ 124 (583)
.+++|||||+.|+.+|..|+. .+.+|+|||..+... |.+ ..++.....+.+++.|
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il--~~~---------~~~~~~~~~~~L~~~G 286 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL--NMF---------EKKLSSYAQSHLENTS 286 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS--TTS---------CHHHHHHHHHHHHHTT
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc--cCC---------CHHHHHHHHHHHHhcc
Confidence 379999999999999987752 246899999987532 111 2355667788889999
Q ss_pred CcEEEEEeEEEEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCC
Q 007975 125 VDICFWEAECFKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARAN 176 (583)
Q Consensus 125 i~v~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~ 176 (583)
+++. .+..|+.++.+...+.....++ .....++++|.||.|+|..|+
T Consensus 287 V~v~-~~~~v~~v~~~~~~~~~~~~dg----~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 287 IKVH-LRTAVAKVEEKQLLAKTKHEDG----KITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp CEEE-TTEEEEEECSSEEEEEEECTTS----CEEEEEEECSEEEECCCEECC
T ss_pred eeee-cCceEEEEeCCceEEEEEecCc----ccceeeeccCEEEEccCCcCC
Confidence 8774 5888999986644433332211 011247999999999998764
No 267
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.61 E-value=0.00029 Score=70.43 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=62.4
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCc---c---cC-------cccHHHHHHHHHHHHhC
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH---I---LN-------MFDKRITAFAEEKFSRD 291 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~---i---l~-------~~~~~~~~~~~~~L~~~ 291 (583)
.|+|||+||.|+.+|..+++. +.+|+|+++... + .+ ..++++.+...+.+.+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~--------------g~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRA--------------RKQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKY 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTS
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhc
Confidence 799999999999999888775 579999997532 0 01 12345666666666666
Q ss_pred CCEEEeCCeEEEEe---CCeEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 292 GIDVKLGSMVVKVT---DKEIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 292 GV~v~~~~~V~~v~---~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
+...+....+..+. .+..++.. .+|++ +.+|.||+|||.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~v~~-~~g~~--~~a~~liiATGs~p 117 (304)
T 4fk1_A 74 PSVHYYEKTVVMITKQSTGLFEIVT-KDHTK--YLAERVLLATGMQE 117 (304)
T ss_dssp TTEEEEECCEEEEEECTTSCEEEEE-TTCCE--EEEEEEEECCCCEE
T ss_pred CCEEEEeeEEEEeeecCCCcEEEEE-CCCCE--EEeCEEEEccCCcc
Confidence 54444444454443 23344443 45664 99999999999654
No 268
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=97.61 E-value=0.00042 Score=75.92 Aligned_cols=56 Identities=18% Similarity=0.215 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeEEEEe--C-Ce---EEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 279 RITAFAEEKFSRDGIDVKLGSMVVKVT--D-KE---IFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 279 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~-~~---v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
.+.+.+.+.+++.||+|+++++|+++. + +. |++.+ .+|+..++.+|.||+|+|...
T Consensus 256 ~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 256 HVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEE-TTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCc
Confidence 445666777888999999999999984 3 33 44443 357655699999999999543
No 269
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.60 E-value=3.6e-05 Score=82.21 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=36.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC--eEEEEcCCCCCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRNYFAFTP 97 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~--~Vtlie~~~~~~~~p 97 (583)
+++|+|||||++||+||++|++.|+ +|+|+|+++..++..
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 4799999999999999999999999 999999998877654
No 270
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.58 E-value=0.00019 Score=76.63 Aligned_cols=95 Identities=13% Similarity=0.206 Sum_probs=69.6
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-----------------------------
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM----------------------------- 275 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~----------------------------- 275 (583)
.|+|||||+.|+.+|..+++. +.+|+||++.+.+...
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~--------------G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~ 71 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKA--------------KYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVK 71 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred eEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCC
Confidence 899999999999999999875 5799999977654211
Q ss_pred --cc-HH----------HH--HHHHHHHHhCCCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 276 --FD-KR----------IT--AFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 276 --~~-~~----------~~--~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
++ +. +. ..+.+.+++.||+++.+ ++..++++.+.+.. .+|+..++.+|.+|+|+|..+
T Consensus 72 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id~~~~~V~~-~~g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 72 IPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKDPTHVIVKT-DEGKEIEAETRYMIIASGAET 144 (466)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEETTEEEEEE-TTSCEEEEEEEEEEECCCEEE
T ss_pred CCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEecCCeEEEEc-CCCcEEEEecCEEEECCCCCc
Confidence 00 00 11 33445556779999988 68888888887765 456544589999999999543
No 271
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.57 E-value=0.00049 Score=71.23 Aligned_cols=97 Identities=23% Similarity=0.369 Sum_probs=66.8
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC------------------------------
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN------------------------------ 274 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~------------------------------ 274 (583)
.|+|||||++|+-+|..|++. +.+|+|+|+.+.+..
T Consensus 6 dVvIvG~G~aGl~~A~~La~~--------------G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ 71 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKY--------------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcc
Confidence 899999999999999999875 356666665442100
Q ss_pred -------------cc--------------cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEE-EEEcCCCeeEEeec
Q 007975 275 -------------MF--------------DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIF-TKVRGNGETSSMPY 324 (583)
Q Consensus 275 -------------~~--------------~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~-~~~~~~G~~~~i~~ 324 (583)
.+ ...+.+.+.+.+++.|++++.+++|++++ ++.++ +....+++..++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a 151 (397)
T 3cgv_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEc
Confidence 00 12345667777888899999999999985 44443 22211233345999
Q ss_pred ceEEEccCCCC
Q 007975 325 GMVVWSTGIAP 335 (583)
Q Consensus 325 D~vI~a~G~~~ 335 (583)
|.||.|.|...
T Consensus 152 ~~vV~A~G~~s 162 (397)
T 3cgv_A 152 KMVIAADGFES 162 (397)
T ss_dssp EEEEECCCTTC
T ss_pred CEEEECCCcch
Confidence 99999999543
No 272
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.57 E-value=0.00016 Score=81.19 Aligned_cols=103 Identities=17% Similarity=0.171 Sum_probs=73.6
Q ss_pred CCCeEEEEC--CcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEE
Q 007975 57 KKKKVVVLG--TGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAEC 134 (583)
Q Consensus 57 ~~~~VVIIG--gG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v 134 (583)
..++|+||| +|+.|+.+|..|.+.|.+|+++++.+.+.- . .........+.+.+++.|+++. ...+|
T Consensus 522 ~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~-----~-----~~~~~~~~~l~~~l~~~GV~i~-~~~~V 590 (690)
T 3k30_A 522 DGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSS-----W-----TNNTFEVNRIQRRLIENGVARV-TDHAV 590 (690)
T ss_dssp SSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTG-----G-----GGGGTCHHHHHHHHHHTTCEEE-ESEEE
T ss_pred CCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccc-----c-----cccchhHHHHHHHHHHCCCEEE-cCcEE
Confidence 346899999 999999999999999999999998865321 1 1112334567778888887663 47789
Q ss_pred EEEecCCCEEEEecCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 135 FKIDAENKKVYCRSSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 135 ~~id~~~~~v~~~~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
+.|+.+...+..... .+..++.+|.||+|+|..|+.
T Consensus 591 ~~i~~~~~~v~~~~~-------~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 591 VAVGAGGVTVRDTYA-------SIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp EEEETTEEEEEETTT-------CCEEEEECSEEEEESCEEECC
T ss_pred EEEECCeEEEEEccC-------CeEEEEECCEEEECCCCCCCh
Confidence 999866433332211 113479999999999998763
No 273
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.56 E-value=0.0007 Score=75.25 Aligned_cols=35 Identities=6% Similarity=0.087 Sum_probs=31.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC------CCeEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP------SYDVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~------g~~Vtlie~~~~ 92 (583)
..+|||||||.||++||..|++. |.+|+||||...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 47999999999999999999975 999999999853
No 274
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.54 E-value=5.3e-05 Score=80.81 Aligned_cols=90 Identities=18% Similarity=0.158 Sum_probs=67.5
Q ss_pred cceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc--------Ccc--cHHHHHHHHHHHHhCC
Q 007975 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--------NMF--DKRITAFAEEKFSRDG 292 (583)
Q Consensus 223 ~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il--------~~~--~~~~~~~~~~~L~~~G 292 (583)
.++|+|||+|+.|+.+|..|.+.. ++.+|+++++.+.+. |.+ ...+...+.+.+++.|
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g------------~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~g 73 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHH------------SRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDR 73 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------SSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTT
T ss_pred CceEEEECcCHHHHHHHHHHHhcC------------CCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCC
Confidence 459999999999999999998752 137999999988764 322 2356677778888999
Q ss_pred CEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 293 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
|+++.++.|. ..|++. +. ++.+|.||+|+|..
T Consensus 74 v~~~~~~~v~----~~V~~~---~~---~~~~d~lVlAtGs~ 105 (460)
T 1cjc_A 74 CAFYGNVEVG----RDVTVQ---EL---QDAYHAVVLSYGAE 105 (460)
T ss_dssp EEEEBSCCBT----TTBCHH---HH---HHHSSEEEECCCCC
T ss_pred cEEEeeeEEe----eEEEec---cc---eEEcCEEEEecCcC
Confidence 9999997762 223221 12 27899999999965
No 275
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.54 E-value=0.00058 Score=74.15 Aligned_cols=57 Identities=12% Similarity=0.293 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeEEEEe--CC----eEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 278 KRITAFAEEKFSRDGIDVKLGSMVVKVT--DK----EIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 278 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~----~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
..+.+.+.+.+++.|++++++++|++++ ++ ++++...+.+...++.+|.||.|.|..
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~ 182 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNR 182 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCc
Confidence 3466777788888999999999999985 44 655543222113359999999999953
No 276
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.53 E-value=2.2e-05 Score=83.48 Aligned_cols=40 Identities=18% Similarity=0.272 Sum_probs=35.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC------CeEEEEcCCCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPS------YDVQVISPRNYFAFT 96 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g------~~Vtlie~~~~~~~~ 96 (583)
++++|+|||||++||+||+.|++.| ++|+|+|+++..++.
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 3579999999999999999999888 999999999877654
No 277
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.50 E-value=4.8e-05 Score=80.95 Aligned_cols=41 Identities=22% Similarity=0.219 Sum_probs=37.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p 97 (583)
..++|||||||++|++||..|++.|++|+|+|++++.++..
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccc
Confidence 45799999999999999999999999999999999887754
No 278
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.50 E-value=5.5e-05 Score=79.52 Aligned_cols=41 Identities=17% Similarity=0.236 Sum_probs=37.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC-CeEEEEcCCCCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNYFAFTP 97 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g-~~Vtlie~~~~~~~~p 97 (583)
++++|+|||||++||+||..|++.| ++|+|+|+++..++..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 4579999999999999999999999 9999999998887653
No 279
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.49 E-value=4.7e-05 Score=82.50 Aligned_cols=71 Identities=18% Similarity=0.237 Sum_probs=49.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhc------cccCCCcccchhHHHHHHhCCCcE
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT------CGTVEARSIVEPVRNIVRKKNVDI 127 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~------~g~~~~~~i~~~~~~~~~~~~i~v 127 (583)
.+++|||||||++||+||..|++.|++|+|+|+++..++........ .|..........+.+++++.++..
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~ 79 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLET 79 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcc
Confidence 35799999999999999999999999999999998887654322211 111000011345667788888543
No 280
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.49 E-value=3.6e-05 Score=83.34 Aligned_cols=41 Identities=29% Similarity=0.408 Sum_probs=37.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC-CeEEEEcCCCCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNYFAFTP 97 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g-~~Vtlie~~~~~~~~p 97 (583)
..++|+|||||++||+||..|.+.| ++|+|+|+++..++..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 4579999999999999999999999 9999999999888764
No 281
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.48 E-value=0.00067 Score=70.77 Aligned_cols=94 Identities=16% Similarity=0.275 Sum_probs=67.1
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC---------------------------
Q 007975 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN--------------------------- 274 (583)
Q Consensus 222 ~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~--------------------------- 274 (583)
+..+|+|||||++|+-+|..|++. +.+|+|+|+.+.+.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~--------------G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~ 87 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQS--------------GIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETF 87 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhh
Confidence 446999999999999999999885 567888877653210
Q ss_pred -------------------cc-----------------cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCC
Q 007975 275 -------------------MF-----------------DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGN 316 (583)
Q Consensus 275 -------------------~~-----------------~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~ 316 (583)
.+ ...+.+.+.+.+.+ ++|+++++|++++ ++++++.. .+
T Consensus 88 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~-~~ 164 (407)
T 3rp8_A 88 GGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWF-TD 164 (407)
T ss_dssp SCCCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEE-TT
T ss_pred cCCCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEE-cC
Confidence 00 02234445555555 8999999999985 46677664 45
Q ss_pred CeeEEeecceEEEccCCC
Q 007975 317 GETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 317 G~~~~i~~D~vI~a~G~~ 334 (583)
|++ +.+|.||.|.|..
T Consensus 165 g~~--~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 165 GSS--ASGDLLIAADGSH 180 (407)
T ss_dssp SCE--EEESEEEECCCTT
T ss_pred CCE--EeeCEEEECCCcC
Confidence 764 9999999999953
No 282
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.47 E-value=4.3e-05 Score=80.73 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
++++|+|||||++|+++|..|++.|++|+|||+++
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999986
No 283
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.47 E-value=0.00097 Score=68.63 Aligned_cols=95 Identities=22% Similarity=0.353 Sum_probs=67.5
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC------------------------------
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN------------------------------ 274 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~------------------------------ 274 (583)
.|+|||||++|+-+|..|++. +.+|+|+|+.+.+-.
T Consensus 6 DViIVGaGpaGl~~A~~La~~--------------G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~ 71 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKY--------------GLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccc
Confidence 699999999999999999885 466777766433210
Q ss_pred --------------------------cc-cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEE-EcCCCeeEEeec
Q 007975 275 --------------------------MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTK-VRGNGETSSMPY 324 (583)
Q Consensus 275 --------------------------~~-~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~-~~~~G~~~~i~~ 324 (583)
.. ...+.+.+.+..++.|++++.+++++++. ++.+... ...+|+..++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a 151 (397)
T 3oz2_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEE
Confidence 00 13345566777788899999999998874 4444322 223466557999
Q ss_pred ceEEEccCC
Q 007975 325 GMVVWSTGI 333 (583)
Q Consensus 325 D~vI~a~G~ 333 (583)
|.||-|.|.
T Consensus 152 ~~vIgAdG~ 160 (397)
T 3oz2_A 152 KMVIAADGF 160 (397)
T ss_dssp EEEEECCCT
T ss_pred eEEEeCCcc
Confidence 999999995
No 284
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.46 E-value=0.00056 Score=73.84 Aligned_cols=97 Identities=21% Similarity=0.328 Sum_probs=69.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCc--------ccC---------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH--------ILN--------------------- 274 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~--------il~--------------------- 274 (583)
.+|+|||||++|+-+|..|++. +.+|+|+++.+. +.|
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~--------------G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~ 73 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMR--------------GHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGF 73 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--------------TCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTC
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCC
Confidence 4899999999999999999864 467777776541 000
Q ss_pred ---------------------------------cc-cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCe---EEEEEcC
Q 007975 275 ---------------------------------MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKE---IFTKVRG 315 (583)
Q Consensus 275 ---------------------------------~~-~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~---v~~~~~~ 315 (583)
.+ ...+.+.+.+.+++.||+++.+++|+++. ++. |++.. .
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~-~ 152 (512)
T 3e1t_A 74 PIKRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRN-T 152 (512)
T ss_dssp CEECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEEC-S
T ss_pred ccccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEe-C
Confidence 00 12455667777888999999999999985 343 44443 4
Q ss_pred CCeeEEeecceEEEccCCCC
Q 007975 316 NGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 316 ~G~~~~i~~D~vI~a~G~~~ 335 (583)
+|+..++.+|.||.|+|...
T Consensus 153 dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 153 EGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp SSCEEEEEEEEEEECCCTTC
T ss_pred CCCEEEEEcCEEEECCCcch
Confidence 57544699999999999643
No 285
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.45 E-value=0.00058 Score=69.44 Aligned_cols=41 Identities=15% Similarity=0.285 Sum_probs=32.0
Q ss_pred HhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccC
Q 007975 289 SRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTG 332 (583)
Q Consensus 289 ~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G 332 (583)
++.|++|+++++|++|+ ++++++.. .+|+. +.+|.||+|+.
T Consensus 120 ~~~g~~i~~~~~V~~i~~~~~~~~v~~-~~g~~--~~ad~vV~A~p 162 (342)
T 3qj4_A 120 KESGAEVYFRHRVTQINLRDDKWEVSK-QTGSP--EQFDLIVLTMP 162 (342)
T ss_dssp HHHTCEEESSCCEEEEEECSSSEEEEE-SSSCC--EEESEEEECSC
T ss_pred HhcCCEEEeCCEEEEEEEcCCEEEEEE-CCCCE--EEcCEEEECCC
Confidence 33489999999999996 45676664 45664 78999999987
No 286
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.45 E-value=0.00065 Score=73.92 Aligned_cols=98 Identities=12% Similarity=0.233 Sum_probs=70.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc--------C-------------cc------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL--------N-------------MF------ 276 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il--------~-------------~~------ 276 (583)
.+|+|||||++|+.+|..|.+. +.+|+|+++.+.+. | .+
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~--------------G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~ 82 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLREL--------------GRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQ 82 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECccHHHHHHHHHHHhC--------------CCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhh
Confidence 4899999999999999999875 57899999875431 1 00
Q ss_pred ----------cHHHHHHHHHHHHhCC--CEEEeCCeEEEEe--CC--eEEEEEcCCCeeEEeecceEEEccCCCCchh
Q 007975 277 ----------DKRITAFAEEKFSRDG--IDVKLGSMVVKVT--DK--EIFTKVRGNGETSSMPYGMVVWSTGIAPHAI 338 (583)
Q Consensus 277 ----------~~~~~~~~~~~L~~~G--V~v~~~~~V~~v~--~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~ 338 (583)
.+++.+++....++.+ ++++++++|++++ ++ ..++.. .+|++ +.+|.||.|+|....|.
T Consensus 83 ~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~-~~G~~--~~ad~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 83 EWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT-NHGDR--IRARYLIMASGQLSVPQ 157 (542)
T ss_dssp HCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEE-TTCCE--EEEEEEEECCCSCCCCC
T ss_pred ccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEE-CCCCE--EEeCEEEECcCCCCCCC
Confidence 1345666666666665 6799999999985 22 344443 45764 89999999999654443
No 287
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.45 E-value=8.1e-05 Score=79.87 Aligned_cols=42 Identities=31% Similarity=0.302 Sum_probs=37.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p 97 (583)
.+.++|+|||||++||+||..|++.|++|+|+|+++..++..
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 346799999999999999999999999999999998877653
No 288
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.45 E-value=0.00079 Score=73.72 Aligned_cols=93 Identities=20% Similarity=0.293 Sum_probs=67.0
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCc-cc-----------------------Cc-----
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH-IL-----------------------NM----- 275 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~-il-----------------------~~----- 275 (583)
.|+|||||+.|+++|..+++. +.+|.|+++.+. +. ..
T Consensus 29 DVIVIGgG~AGl~AAlalAr~--------------G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARM--------------GAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHC--------------CCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHH
Confidence 899999999999999999885 578999998631 10 00
Q ss_pred -------------------------c-cHHHHHHHHHHHHh-CCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecce
Q 007975 276 -------------------------F-DKRITAFAEEKFSR-DGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGM 326 (583)
Q Consensus 276 -------------------------~-~~~~~~~~~~~L~~-~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~ 326 (583)
. ...+.+.+.+.+++ .||+++ +++|+++. ++.+....+.+|+. +.+|.
T Consensus 95 ~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~--i~Ada 171 (637)
T 2zxi_A 95 IDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVE--YKTKA 171 (637)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCE--EECSE
T ss_pred hhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcE--EEeCE
Confidence 0 01345566677777 599995 67899874 45554333355764 99999
Q ss_pred EEEccCCC
Q 007975 327 VVWSTGIA 334 (583)
Q Consensus 327 vI~a~G~~ 334 (583)
||+|+|..
T Consensus 172 VVLATG~~ 179 (637)
T 2zxi_A 172 VVVTTGTF 179 (637)
T ss_dssp EEECCTTC
T ss_pred EEEccCCC
Confidence 99999954
No 289
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=97.45 E-value=0.00061 Score=69.93 Aligned_cols=54 Identities=11% Similarity=0.057 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCCCCc
Q 007975 279 RITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (583)
Q Consensus 279 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 336 (583)
.+.+.+.+.+++.|++++.+++|++++ ++++.+.. .+|+ +.+|.||+|+|....
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~-~~g~---~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIET-ADGE---YQAKKAIVCAGTWVK 205 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE-SSCE---EEEEEEEECCGGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEE-CCCe---EEcCEEEEcCCccHH
Confidence 445566677788999999999999996 34565554 4453 899999999995443
No 290
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.42 E-value=4.8e-05 Score=80.72 Aligned_cols=70 Identities=14% Similarity=0.209 Sum_probs=48.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhh-----ccccCCCcccchhHHHHHHhCCCc
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSV-----TCGTVEARSIVEPVRNIVRKKNVD 126 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~-----~~g~~~~~~i~~~~~~~~~~~~i~ 126 (583)
.+++|+|||||++||+||..|++.|++|+|+|+++..++....... -.|..........+.+++++.++.
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~ 78 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLK 78 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCc
Confidence 3579999999999999999999999999999999887765432211 011100011134567778888854
No 291
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.40 E-value=7.9e-05 Score=79.33 Aligned_cols=93 Identities=18% Similarity=0.134 Sum_probs=66.8
Q ss_pred ceEEEEcCChhHHHHHHHHHH-hhhHhHhhhcCCCCCCceEEEEecCCccc--------Cc--ccHHHHHHHHHHHHhCC
Q 007975 224 LHFVIVGGGPTGVEFAAELHD-FVDEDLFKLYPKVKDSVKITLLEAADHIL--------NM--FDKRITAFAEEKFSRDG 292 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~-~~~~~~~~~~p~~~~~~~Vtlv~~~~~il--------~~--~~~~~~~~~~~~L~~~G 292 (583)
++|+|||||+.|+.+|..|.+ ... ....+.+|+|+++.+.+. |. ...++...+.+.+++.|
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~--------~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~ 75 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADT--------TEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPR 75 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH--------STTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhhCcc--------ccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCC
Confidence 489999999999999999987 521 000157999999987653 21 22356677778888899
Q ss_pred CEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 293 IDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 293 V~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
|+++.+..| +..|++.+ ++ +.+|.||+|+|..
T Consensus 76 v~~~~~v~v----~~~v~~~~---~~---~~~d~lViAtG~~ 107 (456)
T 1lqt_A 76 FRFFGNVVV----GEHVQPGE---LS---ERYDAVIYAVGAQ 107 (456)
T ss_dssp EEEEESCCB----TTTBCHHH---HH---HHSSEEEECCCCC
T ss_pred CEEEeeEEE----CCEEEECC---Ce---EeCCEEEEeeCCC
Confidence 999998654 23343322 43 8899999999964
No 292
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.40 E-value=0.00034 Score=77.10 Aligned_cols=101 Identities=15% Similarity=0.203 Sum_probs=66.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEE
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKI 137 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~i 137 (583)
.++|+|||||+.|+.+|..|++.|.+||||++.. . ++. ...++...+.+.+++.|+++. ....+..+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~--~----l~~------~d~~~~~~~~~~l~~~gv~i~-~~~~v~~v 352 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSI--L----LRG------FDQQMAEKVGDYMENHGVKFA-KLCVPDEI 352 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC--S----STT------SCHHHHHHHHHHHHHTTCEEE-ETEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc--C----cCc------CCHHHHHHHHHHHHhCCCEEE-ECCeEEEE
Confidence 4689999999999999999999999999999872 1 111 112345566677888886653 34445555
Q ss_pred ec---------CCCEEEEe--cCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 138 DA---------ENKKVYCR--SSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 138 d~---------~~~~v~~~--~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
.. ....+.+. ... +++..+.+|.||+|+|..|+.
T Consensus 353 ~~~~~~~~~~~~~~~~~v~~~~~~------g~~~~~~~D~vi~a~G~~p~~ 397 (598)
T 2x8g_A 353 KQLKVVDTENNKPGLLLVKGHYTD------GKKFEEEFETVIFAVGREPQL 397 (598)
T ss_dssp EEEECCBTTTTBCCEEEEEEEETT------SCEEEEEESEEEECSCEEECG
T ss_pred EeccccccccCCCceEEEEEEeCC------CcEEeccCCEEEEEeCCcccc
Confidence 32 11333322 111 122345699999999999875
No 293
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.40 E-value=8.7e-05 Score=79.28 Aligned_cols=70 Identities=14% Similarity=0.147 Sum_probs=47.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhc-----cccCCCcccchhHHHHHHhCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVT-----CGTVEARSIVEPVRNIVRKKNV 125 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~-----~g~~~~~~i~~~~~~~~~~~~i 125 (583)
...++|+|||||++|++||..|++.|++|+|+|+++..++........ .|..........+.+++++.++
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl 88 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNL 88 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCC
Confidence 345799999999999999999999999999999999877654322211 1110000012356677888774
No 294
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.35 E-value=0.0001 Score=75.77 Aligned_cols=35 Identities=34% Similarity=0.488 Sum_probs=32.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
++.+|+|||||++|+++|+.|++.|++|+|||++.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 45799999999999999999999999999999875
No 295
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.35 E-value=0.0016 Score=70.13 Aligned_cols=98 Identities=23% Similarity=0.276 Sum_probs=69.4
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc----------------------------
Q 007975 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL---------------------------- 273 (583)
Q Consensus 222 ~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il---------------------------- 273 (583)
....|+|||||++|+-+|..|++. +.+|+|+|+.+.+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~--------------G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~ 76 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLG--------------GVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPV 76 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhc
Confidence 345899999999999999999885 45666666533210
Q ss_pred ----------------------Cc---c-cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEc-CCCeeEEeec
Q 007975 274 ----------------------NM---F-DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVR-GNGETSSMPY 324 (583)
Q Consensus 274 ----------------------~~---~-~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~-~~G~~~~i~~ 324 (583)
+. + ...+.+.+.+.+++.|++|+.+++|++++ ++++++... .+|+ .++.+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~-~~~~a 155 (499)
T 2qa2_A 77 ETSTQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGP-RSLTT 155 (499)
T ss_dssp CEESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCE-EEEEE
T ss_pred cccccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCc-EEEEe
Confidence 00 0 14566777778888899999999999996 345655432 2232 35999
Q ss_pred ceEEEccCCC
Q 007975 325 GMVVWSTGIA 334 (583)
Q Consensus 325 D~vI~a~G~~ 334 (583)
|.||-|.|..
T Consensus 156 ~~vVgADG~~ 165 (499)
T 2qa2_A 156 RYVVGCDGGR 165 (499)
T ss_dssp EEEEECCCTT
T ss_pred CEEEEccCcc
Confidence 9999999953
No 296
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.34 E-value=0.0017 Score=69.82 Aligned_cols=97 Identities=24% Similarity=0.337 Sum_probs=68.6
Q ss_pred cceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc-----------------------------
Q 007975 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL----------------------------- 273 (583)
Q Consensus 223 ~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il----------------------------- 273 (583)
...|+|||||++|+-+|..|++. +.+|+|+|+.+.+.
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~--------------G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~ 76 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLA--------------GVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVE 76 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcc
Confidence 34899999999999999999885 45666666543210
Q ss_pred ---------------------C---cc-cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcC-CCeeEEeecc
Q 007975 274 ---------------------N---MF-DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRG-NGETSSMPYG 325 (583)
Q Consensus 274 ---------------------~---~~-~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~-~G~~~~i~~D 325 (583)
+ .+ ...+.+.+.+.+++.|++|+.+++|++++ ++++++...+ +| ..++.+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g-~~~~~a~ 155 (500)
T 2qa1_A 77 TSTQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEG-KHTLRAA 155 (500)
T ss_dssp BCCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTE-EEEEEES
T ss_pred ccccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCC-CEEEEeC
Confidence 0 00 13456677778888899999999999985 4566554321 23 2359999
Q ss_pred eEEEccCCC
Q 007975 326 MVVWSTGIA 334 (583)
Q Consensus 326 ~vI~a~G~~ 334 (583)
.||-|.|..
T Consensus 156 ~vVgADG~~ 164 (500)
T 2qa1_A 156 YLVGCDGGR 164 (500)
T ss_dssp EEEECCCTT
T ss_pred EEEECCCcc
Confidence 999999953
No 297
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.34 E-value=0.0001 Score=76.73 Aligned_cols=42 Identities=19% Similarity=0.335 Sum_probs=37.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p 97 (583)
....+|+|||||++|+++|..|++.|++|+|+|+++..++..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~ 68 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNA 68 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCcc
Confidence 346899999999999999999998899999999998776543
No 298
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.33 E-value=8.9e-05 Score=77.51 Aligned_cols=40 Identities=18% Similarity=0.310 Sum_probs=36.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC-CCeEEEEcCCCCCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYFAFTP 97 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~-g~~Vtlie~~~~~~~~p 97 (583)
.++|+|||||++|++||..|++. |++|+|+|+++..++..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~ 47 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNA 47 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGG
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCee
Confidence 57999999999999999999987 99999999998877654
No 299
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.32 E-value=0.0001 Score=78.75 Aligned_cols=70 Identities=9% Similarity=0.110 Sum_probs=47.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC--CeEEEEcCCCCCCCCCchhhhc-----cccCCCcccchhHHHHHHhCCCc
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPS--YDVQVISPRNYFAFTPLLPSVT-----CGTVEARSIVEPVRNIVRKKNVD 126 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g--~~Vtlie~~~~~~~~p~l~~~~-----~g~~~~~~i~~~~~~~~~~~~i~ 126 (583)
++++|+|||||++|+++|+.|++.| ++|+|+|+++..++........ .|..........+.+++++.++.
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~ 79 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLG 79 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCG
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCc
Confidence 4689999999999999999999888 9999999988766543221111 01101111233466777777754
No 300
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.32 E-value=0.00014 Score=78.35 Aligned_cols=69 Identities=17% Similarity=0.133 Sum_probs=47.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhh-----ccccCCCcccchhHHHHHHhCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSV-----TCGTVEARSIVEPVRNIVRKKNV 125 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~-----~~g~~~~~~i~~~~~~~~~~~~i 125 (583)
++++|+|||||++||+||..|++.|++|+|+|+++..++....... -.|..........+.+++++.++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl 85 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGL 85 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCC
Confidence 3579999999999999999999999999999999987765322211 01110000112456777888774
No 301
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.32 E-value=0.00076 Score=73.81 Aligned_cols=95 Identities=24% Similarity=0.312 Sum_probs=70.3
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc-------------------------------
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL------------------------------- 273 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il------------------------------- 273 (583)
.|+|||||++|+-+|..|++. +.+|+|+|+.+...
T Consensus 51 DVvIVGaG~aGL~~A~~La~~--------------G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~ 116 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAG--------------GVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQV 116 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCB
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcc
Confidence 899999999999999999875 57888888653210
Q ss_pred ------C---------------------cccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC--CeEEEEEc-CCCeeEEee
Q 007975 274 ------N---------------------MFDKRITAFAEEKFSRDGIDVKLGSMVVKVTD--KEIFTKVR-GNGETSSMP 323 (583)
Q Consensus 274 ------~---------------------~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~v~~~~~-~~G~~~~i~ 323 (583)
. -....+.+.+.+.+++.||+|+.+++|++++. +++++... .+|+ .++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~-~~~~ 195 (570)
T 3fmw_A 117 AKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGP-YPVR 195 (570)
T ss_dssp CSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEE-EEEE
T ss_pred cCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCc-EEEE
Confidence 0 00234567777788888999999999999964 45554431 3462 2599
Q ss_pred cceEEEccCCC
Q 007975 324 YGMVVWSTGIA 334 (583)
Q Consensus 324 ~D~vI~a~G~~ 334 (583)
+|.||.|.|..
T Consensus 196 a~~vV~ADG~~ 206 (570)
T 3fmw_A 196 ARYGVGCDGGR 206 (570)
T ss_dssp ESEEEECSCSS
T ss_pred eCEEEEcCCCC
Confidence 99999999953
No 302
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.31 E-value=0.0029 Score=65.53 Aligned_cols=50 Identities=18% Similarity=0.195 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCC
Q 007975 280 ITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (583)
Q Consensus 280 ~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~ 333 (583)
+.+.+.+.+++.|++++++++|++++ ++++++.. .+|+ +.+|.||+|+|.
T Consensus 155 ~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t-~~g~---i~a~~VV~A~G~ 206 (397)
T 2oln_A 155 TLAALFTLAQAAGATLRAGETVTELVPDADGVSVTT-DRGT---YRAGKVVLACGP 206 (397)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE-SSCE---EEEEEEEECCGG
T ss_pred HHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEE-CCCE---EEcCEEEEcCCc
Confidence 34556667778899999999999985 45666654 3343 999999999994
No 303
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.30 E-value=0.00025 Score=76.30 Aligned_cols=95 Identities=23% Similarity=0.387 Sum_probs=66.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC----------cc---cHHHHHHHHHHHHh
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------MF---DKRITAFAEEKFSR 290 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~----------~~---~~~~~~~~~~~L~~ 290 (583)
.+|+|||||+.|+.+|..|++. .+|+|+++.+.+.. .+ ..++...+.+.+ +
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~---------------~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~ 172 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY---------------LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-N 172 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT---------------CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-C
T ss_pred CCEEEECccHHHHHHHHHHHhc---------------CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-h
Confidence 4899999999999999998763 48999999876511 11 123333333444 5
Q ss_pred CCCEEEeCCeEEEEeCC--eEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 291 DGIDVKLGSMVVKVTDK--EIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 291 ~GV~v~~~~~V~~v~~~--~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
.||++++++.|.+++.+ .+.+....+++..++.+|.+|+|+|..
T Consensus 173 ~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~ 218 (493)
T 1y56_A 173 ENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAI 218 (493)
T ss_dssp TTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEE
T ss_pred cCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCC
Confidence 69999999999888643 343332234654459999999999954
No 304
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.29 E-value=0.00017 Score=84.59 Aligned_cols=90 Identities=18% Similarity=0.285 Sum_probs=68.1
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCc-eEEEEecCCccc-------Cc--ccHHHHHHHHHHHHhC
Q 007975 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAADHIL-------NM--FDKRITAFAEEKFSRD 291 (583)
Q Consensus 222 ~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~-~Vtlv~~~~~il-------~~--~~~~~~~~~~~~L~~~ 291 (583)
..++|+|||||+.|+.+|..|++. +. +|+|+++.+.+. |. ++....++..+.+++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~--------------G~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~ 251 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARL--------------GYSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDL 251 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHT--------------TCCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECccHHHHHHHHHHHhc--------------CCCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHC
Confidence 467999999999999999999875 45 799999987653 21 3455666667888999
Q ss_pred CCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEEccCC
Q 007975 292 GIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (583)
Q Consensus 292 GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~ 333 (583)
||++++++.+.. ..+++.+ ++. +.+|.||+|+|.
T Consensus 252 gv~~~~~~~v~~---~~v~~~~---~~~--~~~d~vvlAtGa 285 (1025)
T 1gte_A 252 GVKIICGKSLSE---NEITLNT---LKE--EGYKAAFIGIGL 285 (1025)
T ss_dssp TCEEEESCCBST---TSBCHHH---HHH--TTCCEEEECCCC
T ss_pred CcEEEcccEecc---ceEEhhh---cCc--cCCCEEEEecCC
Confidence 999999987732 2233322 333 789999999996
No 305
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.29 E-value=0.00015 Score=75.29 Aligned_cols=39 Identities=23% Similarity=0.493 Sum_probs=35.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~ 96 (583)
..+|+|||||++|+++|..|.+.|++|+|+|+++..++.
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 41 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGN 41 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCc
Confidence 469999999999999999999999999999999887654
No 306
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.28 E-value=0.0015 Score=71.65 Aligned_cols=94 Identities=15% Similarity=0.240 Sum_probs=67.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCc-cc-----------------------Cc----
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH-IL-----------------------NM---- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~-il-----------------------~~---- 275 (583)
..|+|||||+.|+++|..+++. +.+|+|+++.+. +. +.
T Consensus 22 yDVIVIGgG~AGl~AAlaLAr~--------------G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~ 87 (641)
T 3cp8_A 22 YDVIVVGAGHAGCEAALAVARG--------------GLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGK 87 (641)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHH
T ss_pred CCEEEECccHHHHHHHHHHHHC--------------CCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHH
Confidence 4899999999999999999885 578999987641 10 00
Q ss_pred --------------------------cc-HHHHHHHHHHHHhC-CCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecc
Q 007975 276 --------------------------FD-KRITAFAEEKFSRD-GIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYG 325 (583)
Q Consensus 276 --------------------------~~-~~~~~~~~~~L~~~-GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D 325 (583)
.+ ..+.+.+.+.+++. ||+++. ..|+++. ++.+....+.+|+. +.+|
T Consensus 88 ~~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~-~~V~~L~~d~g~V~GV~t~~G~~--i~Ad 164 (641)
T 3cp8_A 88 AIDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQ-DTVIGVSANSGKFSSVTVRSGRA--IQAK 164 (641)
T ss_dssp HHHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEE-CCEEEEEEETTEEEEEEETTSCE--EEEE
T ss_pred HHHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEe-eEEEEEEecCCEEEEEEECCCcE--EEeC
Confidence 01 14456666777774 999965 4888864 56665233345764 9999
Q ss_pred eEEEccCCC
Q 007975 326 MVVWSTGIA 334 (583)
Q Consensus 326 ~vI~a~G~~ 334 (583)
.||+|+|..
T Consensus 165 ~VVLATG~~ 173 (641)
T 3cp8_A 165 AAILACGTF 173 (641)
T ss_dssp EEEECCTTC
T ss_pred EEEECcCCC
Confidence 999999964
No 307
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.28 E-value=0.0017 Score=66.59 Aligned_cols=52 Identities=13% Similarity=0.075 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 279 RITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 279 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
.+...+.+.+++.|++++++++|++++ ++.+.+.. .+| ++.+|.||+|+|..
T Consensus 155 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t-~~g---~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 155 ALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRC-DAG---SYRAAVLVNAAGAW 208 (381)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEEC-SSE---EEEESEEEECCGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEe-CCC---EEEcCEEEECCChh
Confidence 344556677788999999999999985 45555543 445 39999999999943
No 308
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.27 E-value=0.0018 Score=72.39 Aligned_cols=54 Identities=13% Similarity=0.149 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCCCCc
Q 007975 280 ITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGIAPH 336 (583)
Q Consensus 280 ~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~ 336 (583)
+...+.+.+++.||+|+++++|+++. ++++.+.. .+|.+ +.+|.||+|+|....
T Consensus 419 l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t-~~G~~--i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 419 LTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNF-AGDQQ--ATHSVVVLANGHQIS 474 (676)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEE-TTSCE--EEESEEEECCGGGGG
T ss_pred HHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEE-CCCCE--EECCEEEECCCcchh
Confidence 33445566678899999999999985 46666654 34554 999999999996433
No 309
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.25 E-value=0.0011 Score=68.85 Aligned_cols=95 Identities=16% Similarity=0.216 Sum_probs=64.0
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-------c-c---H----------HH--
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-------F-D---K----------RI-- 280 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-------~-~---~----------~~-- 280 (583)
.+|+|||||++|+.+|..|++. +.+|+|+|+.+.+... + + . .+
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~--------------G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~ 92 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQN--------------GIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYD 92 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--------------TCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHH
Confidence 4899999999999999999874 5789999987643110 0 0 0 00
Q ss_pred ----------------------------------HHHHHHHHHhC--CCEEEeCCeEEEEeC--CeEEEEEcCCCeeEEe
Q 007975 281 ----------------------------------TAFAEEKFSRD--GIDVKLGSMVVKVTD--KEIFTKVRGNGETSSM 322 (583)
Q Consensus 281 ----------------------------------~~~~~~~L~~~--GV~v~~~~~V~~v~~--~~v~~~~~~~G~~~~i 322 (583)
...+.+.|.+. +++++++++|++++. +++++.. .+|++ +
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~-~~g~~--~ 169 (398)
T 2xdo_A 93 LALPMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGKKKWTLTF-ENKPS--E 169 (398)
T ss_dssp HCBCCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECSSSEEEEE-TTSCC--E
T ss_pred hhcccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECCCEEEEEE-CCCcE--E
Confidence 01122223221 468999999999963 4566654 45764 8
Q ss_pred ecceEEEccCCCC
Q 007975 323 PYGMVVWSTGIAP 335 (583)
Q Consensus 323 ~~D~vI~a~G~~~ 335 (583)
.+|.||.|.|...
T Consensus 170 ~ad~vV~AdG~~S 182 (398)
T 2xdo_A 170 TADLVILANGGMS 182 (398)
T ss_dssp EESEEEECSCTTC
T ss_pred ecCEEEECCCcch
Confidence 9999999999543
No 310
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.24 E-value=0.00013 Score=78.47 Aligned_cols=53 Identities=15% Similarity=0.118 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhCC-CEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCC
Q 007975 278 KRITAFAEEKFSRDG-IDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (583)
Q Consensus 278 ~~~~~~~~~~L~~~G-V~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~ 333 (583)
..+.+.+.+.+++.| ++|+++++|++|+ ++++.+.. .+|+. +.+|.||+|+|.
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~-~~g~~--~~ad~vI~a~~~ 310 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTA-RDGRE--FVAKRVVCTIPL 310 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEE-TTCCE--EEEEEEEECCCG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEE-CCCCE--EEcCEEEECCCH
Confidence 467778888888888 9999999999996 45576654 45654 899999999994
No 311
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.23 E-value=0.00016 Score=77.65 Aligned_cols=70 Identities=23% Similarity=0.206 Sum_probs=48.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhh-------ccccCCCcccchhHHHHHHhCCCc
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSV-------TCGTVEARSIVEPVRNIVRKKNVD 126 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~-------~~g~~~~~~i~~~~~~~~~~~~i~ 126 (583)
.+++|+|||||++|+++|..|++.|++|+|+|+++..++....... -.|..........+.+++++.|+.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~ 108 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIVREYIRKFDLR 108 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHHHHHHHHTTCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHHHHHHHHhCCC
Confidence 4579999999999999999999999999999999887765422211 011110111134567788888854
No 312
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.22 E-value=0.0026 Score=69.74 Aligned_cols=69 Identities=13% Similarity=0.284 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeEEEEe--C-CeEE-EEEc-----CCCee-------EEeecceEEEccCCCCchhHHHH
Q 007975 279 RITAFAEEKFSRDGIDVKLGSMVVKVT--D-KEIF-TKVR-----GNGET-------SSMPYGMVVWSTGIAPHAIIKDF 342 (583)
Q Consensus 279 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~-~~v~-~~~~-----~~G~~-------~~i~~D~vI~a~G~~~~p~~~~l 342 (583)
.+.+.+.+.+++.||+|+.+++|+++. + +.++ +... .+|+. .++.+|.||.|.|.... ..+.+
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~-vr~~l 223 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH-LAKQL 223 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH-HHHHH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch-HHHHH
Confidence 566777888888999999999999985 2 2343 3321 13421 25999999999995432 22344
Q ss_pred HHHhCc
Q 007975 343 MKQVGQ 348 (583)
Q Consensus 343 ~~~~~~ 348 (583)
....++
T Consensus 224 ~~~~gl 229 (584)
T 2gmh_A 224 YKKFDL 229 (584)
T ss_dssp HHHTTT
T ss_pred HHHhCC
Confidence 444454
No 313
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.21 E-value=0.00084 Score=75.03 Aligned_cols=100 Identities=18% Similarity=0.195 Sum_probs=64.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEE-------------------------------------EcCCCCCCCCCch
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQV-------------------------------------ISPRNYFAFTPLL 99 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtl-------------------------------------ie~~~~~~~~p~l 99 (583)
..++|+|||||+.|+.+|..|++.|.+|++ +++.+...
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l----- 567 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKP----- 567 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCT-----
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEEecchhh-----
Confidence 357999999999999999999987755443 32221100
Q ss_pred hhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEEecCCCEEEEe-cCCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 100 PSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKIDAENKKVYCR-SSQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 100 ~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id~~~~~v~~~-~~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
...+ .......+.+.+++.|+++. ...+|+.++.+ .+.+. ++ +..++.+|.||+|+|..|+.
T Consensus 568 ----~~~l-~~~~~~~~~~~l~~~GV~v~-~~~~v~~i~~~--~v~~~~~G--------~~~~i~~D~Vi~a~G~~p~~ 630 (671)
T 1ps9_A 568 ----GQGL-GKTTGWIHRTTLLSRGVKMI-PGVSYQKIDDD--GLHVVING--------ETQVLAVDNVVICAGQEPNR 630 (671)
T ss_dssp ----TTTS-CTTTHHHHHHHHHHTTCEEE-CSCEEEEEETT--EEEEEETT--------EEEEECCSEEEECCCEEECC
T ss_pred ----cccc-ccccHHHHHHHHHhcCCEEE-eCcEEEEEeCC--eEEEecCC--------eEEEEeCCEEEECCCccccH
Confidence 0001 11223345677788886653 46788888854 45553 22 12489999999999998864
No 314
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.20 E-value=0.0018 Score=69.58 Aligned_cols=56 Identities=16% Similarity=0.063 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeEEEEeC--C--eEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD--K--EIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 279 ~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~--~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
.+...+.+.+++.|++++.+++|+++.. + +|++.+..+|+..++.+|.||.|+|..
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~ 209 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPW 209 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChh
Confidence 4556677778889999999999999853 2 244433235764459999999999943
No 315
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.20 E-value=0.00017 Score=74.41 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=34.9
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~ 96 (583)
.+|+|||||++|+++|..|++.|++|+|+|+++..++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~ 39 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGN 39 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcc
Confidence 58999999999999999999999999999999877664
No 316
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.16 E-value=0.00016 Score=74.97 Aligned_cols=35 Identities=23% Similarity=0.472 Sum_probs=32.0
Q ss_pred CeEEEECCcHHHHHHHHhcCCC--CCeEEEEcCCCCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNP--SYDVQVISPRNYF 93 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~--g~~Vtlie~~~~~ 93 (583)
++|+|||||++|+++|..|++. |++|+|||+++..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999977 9999999998764
No 317
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.14 E-value=0.0035 Score=67.57 Aligned_cols=55 Identities=18% Similarity=0.138 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeEEEEeC---C---eEEEEEcCCCeeEEeecc-eEEEccCCCC
Q 007975 279 RITAFAEEKFSRDGIDVKLGSMVVKVTD---K---EIFTKVRGNGETSSMPYG-MVVWSTGIAP 335 (583)
Q Consensus 279 ~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~---~v~~~~~~~G~~~~i~~D-~vI~a~G~~~ 335 (583)
.+.+.+.+.+++.||+|+++++|+++.. + +|++.. +|+..++.+| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~--~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQ--YGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEE--TTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEE--CCcEEEEEeCCeEEEeCCChh
Confidence 4556666777889999999999999852 3 244443 4655569996 9999999543
No 318
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.14 E-value=0.0035 Score=64.88 Aligned_cols=99 Identities=16% Similarity=0.237 Sum_probs=66.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-------ccHHHH---------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-------FDKRIT--------------- 281 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-------~~~~~~--------------- 281 (583)
++|+|||||++|+-+|..|++. +.+|+|+|+.+.+-.. +.+...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~--------------G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~ 67 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH--------------GIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAF 67 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC--------------CCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHh
Confidence 3899999999999999999875 6789999876543210 111100
Q ss_pred --------------------------------------------HHHHHHHHh-CCCEEEeCCeEEEEeC---CeEEEEE
Q 007975 282 --------------------------------------------AFAEEKFSR-DGIDVKLGSMVVKVTD---KEIFTKV 313 (583)
Q Consensus 282 --------------------------------------------~~~~~~L~~-~GV~v~~~~~V~~v~~---~~v~~~~ 313 (583)
..+.+.|.+ .+..|++++++++++. +.+++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~ 147 (412)
T 4hb9_A 68 EEASRYIGGQSRFYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANTIQWNKTFVRYEHIENGGIKIFF 147 (412)
T ss_dssp HHHCEEECCCCEEECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEE
T ss_pred hhhhcccCcceeEecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEE
Confidence 112233322 3557888999999852 3466654
Q ss_pred cCCCeeEEeecceEEEccCCCCchhHHH
Q 007975 314 RGNGETSSMPYGMVVWSTGIAPHAIIKD 341 (583)
Q Consensus 314 ~~~G~~~~i~~D~vI~a~G~~~~p~~~~ 341 (583)
.+|++ +.+|+||-|-|. +..+..
T Consensus 148 -~dG~~--~~adlvVgADG~--~S~vR~ 170 (412)
T 4hb9_A 148 -ADGSH--ENVDVLVGADGS--NSKVRK 170 (412)
T ss_dssp -TTSCE--EEESEEEECCCT--TCHHHH
T ss_pred -CCCCE--EEeeEEEECCCC--CcchHH
Confidence 56875 899999999994 444433
No 319
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.10 E-value=0.00052 Score=79.82 Aligned_cols=95 Identities=14% Similarity=0.134 Sum_probs=69.0
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEEEEe
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECFKID 138 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~~id 138 (583)
++|+|||+|+.|+.+|..|.+.|.+|+||++.+.+. . . .+.+++.|+++. ....++.|.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-----~----------~-----~~~l~~~GV~v~-~~~~v~~i~ 343 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-----A----------A-----AAQAVADGVQVI-SGSVVVDTE 343 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC-----H----------H-----HHHHHHTTCCEE-ETEEEEEEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc-----h----------h-----HHHHHhCCeEEE-eCCEeEEEe
Confidence 689999999999999999999999999999987531 1 0 345677887764 467788887
Q ss_pred c--CCC--EEEEec--CCCCCCCCCceEEeecCEEEEccCCCCCC
Q 007975 139 A--ENK--KVYCRS--SQNTNLNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 139 ~--~~~--~v~~~~--~~~~~~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
. +++ .|.+.+ ..+ .+++..++.+|.||+|+|..|+.
T Consensus 344 ~~~~~~v~~v~~~~~~~~~---~~G~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 344 ADENGELSAIVVAELDEAR---ELGGTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp ECTTSCEEEEEEEEECTTC---CEEEEEEEECSEEEEECCEEECC
T ss_pred ccCCCCEEEEEEEeccccC---CCCceEEEEcCEEEECCCcCcCh
Confidence 6 333 455553 100 00112489999999999988764
No 320
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.06 E-value=0.0007 Score=76.37 Aligned_cols=106 Identities=16% Similarity=0.247 Sum_probs=69.6
Q ss_pred CCeEEEEC--CcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCCchhhhccccCCCcccchhHHHHHHhCCCcEEEEEeEEE
Q 007975 58 KKKVVVLG--TGWAGTSFLKNLNNPSYDVQVISPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIVRKKNVDICFWEAECF 135 (583)
Q Consensus 58 ~~~VVIIG--gG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p~l~~~~~g~~~~~~i~~~~~~~~~~~~i~v~~~~~~v~ 135 (583)
.++|+||| ||+.|+.+|..|++.|.+||||++.+ +. +.... .. . ...+.+.+++.|+++. ...+++
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~-----~~~~~---~~-~-~~~~~~~l~~~GV~i~-~~~~v~ 595 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LA-----NYMHF---TL-E-YPNMMRRLHELHVEEL-GDHFCS 595 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TT-----HHHHH---TT-C-HHHHHHHHHHTTCEEE-CSEEEE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cc-----ccccc---cc-c-HHHHHHHHHhCCCEEE-cCcEEE
Confidence 46999999 99999999999999999999999886 21 11000 00 1 2455667778886653 466788
Q ss_pred EEecCCCEEEEec--CCCCC-----------CCCCceEEeecCEEEEccCCCCCC
Q 007975 136 KIDAENKKVYCRS--SQNTN-----------LNGKEEFCMDYDYLVIAMGARANT 177 (583)
Q Consensus 136 ~id~~~~~v~~~~--~~~~~-----------~~~~~~~~i~yD~LViAtG~~~~~ 177 (583)
.|+.+. +.+.. ..+.. ..+..++.+.+|.||+|+|..|+.
T Consensus 596 ~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 596 RIEPGR--MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp EEETTE--EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred EEECCe--EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 888653 33321 11000 001113459999999999998764
No 321
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.05 E-value=0.00027 Score=72.47 Aligned_cols=34 Identities=26% Similarity=0.326 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+++|+|||||+||+.||..|++.|++|+|||+++
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 4799999999999999999999999999999876
No 322
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.05 E-value=0.00028 Score=75.65 Aligned_cols=41 Identities=15% Similarity=0.122 Sum_probs=36.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC-CeEEEEcCCCCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNYFAFTP 97 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g-~~Vtlie~~~~~~~~p 97 (583)
+.++|+|||||++|+++|..|++.| .+|+|+|+++..++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~ 49 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLS 49 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCee
Confidence 4579999999999999999999888 7999999998776543
No 323
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.04 E-value=0.002 Score=71.52 Aligned_cols=57 Identities=14% Similarity=0.179 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhCCC--EEEeCCeEEEEeCC------eEEEEEc-----CCCeeEEeecceEEEccCCC
Q 007975 278 KRITAFAEEKFSRDGI--DVKLGSMVVKVTDK------EIFTKVR-----GNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 278 ~~~~~~~~~~L~~~GV--~v~~~~~V~~v~~~------~v~~~~~-----~~G~~~~i~~D~vI~a~G~~ 334 (583)
..+.+.+.+.+++.|+ +|+.+++|++++.+ .+++... .+|+..++.+|.||.|.|..
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~ 210 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGAR 210 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcc
Confidence 3566778888888887 99999999998632 3555432 24654469999999999953
No 324
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.04 E-value=0.0002 Score=77.32 Aligned_cols=53 Identities=13% Similarity=0.112 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeEEEEeC--Ce--EEEEEcCCCeeEEeecceEEEccCCC
Q 007975 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTD--KE--IFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 278 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~--v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
..+.+.+.+.+++.||+++.+ +|++++. ++ +.+.. .+|++ +.+|.||.|+|..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~-~~g~~--~~ad~vV~A~G~~ 229 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHT-KQHGE--ISGDLFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEE-SSSCE--EECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEE-CCCCE--EEcCEEEECCCcc
Confidence 467777888888899999999 9999863 33 33433 45754 9999999999954
No 325
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.02 E-value=0.00089 Score=69.25 Aligned_cols=87 Identities=21% Similarity=0.416 Sum_probs=64.7
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc----------------------c-C-------
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI----------------------L-N------- 274 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i----------------------l-~------- 274 (583)
+|+|||||++|+.+|..|++.. ++.+|+|+|+.+.+ . .
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~------------~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQAR------------PLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNP 69 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCC
T ss_pred eEEEECCCHHHHHHHHHHHhcC------------CCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhh
Confidence 7999999999999999998751 14567777765432 0 0
Q ss_pred -------------------------cccHHHHHHHHHHHHhCCCEEEeCCeEEEEeCCeEEEEEcCCCeeEEeecceEEE
Q 007975 275 -------------------------MFDKRITAFAEEKFSRDGIDVKLGSMVVKVTDKEIFTKVRGNGETSSMPYGMVVW 329 (583)
Q Consensus 275 -------------------------~~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~~~v~~~~~~~G~~~~i~~D~vI~ 329 (583)
.....+.+.+.+.+++.||+++++++|++++.. + ++.+|.||.
T Consensus 70 ~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~----------~--~~~ad~vV~ 137 (381)
T 3c4a_A 70 QFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL----------P--LADYDLVVL 137 (381)
T ss_dssp EEECCEEEEESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC----------C--GGGCSEEEE
T ss_pred ccccceEEEeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc----------c--cccCCEEEE
Confidence 012456778888888889999999999888642 1 268999999
Q ss_pred ccCCCC
Q 007975 330 STGIAP 335 (583)
Q Consensus 330 a~G~~~ 335 (583)
|.|..+
T Consensus 138 AdG~~S 143 (381)
T 3c4a_A 138 ANGVNH 143 (381)
T ss_dssp CCGGGG
T ss_pred CCCCCc
Confidence 999543
No 326
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=96.97 E-value=0.00042 Score=73.18 Aligned_cols=41 Identities=20% Similarity=0.265 Sum_probs=37.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFTP 97 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~p 97 (583)
..++|+|||||++|+++|..|++.|++|+|+|++++.++..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccc
Confidence 35799999999999999999999999999999998877754
No 327
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=96.96 E-value=0.00023 Score=72.73 Aligned_cols=33 Identities=30% Similarity=0.415 Sum_probs=30.5
Q ss_pred CeEEEECCcHHHHHHHHhcCCCC------CeEEEEcCCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPS------YDVQVISPRN 91 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g------~~Vtlie~~~ 91 (583)
++|+|||||++|+++|+.|++.| ++|+|||++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999876 9999999985
No 328
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.91 E-value=0.00058 Score=76.20 Aligned_cols=41 Identities=24% Similarity=0.413 Sum_probs=37.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~ 96 (583)
...++|+|||||++|+++|..|.+.|++|+|+|+++..++.
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 145 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 45689999999999999999999999999999999887664
No 329
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.89 E-value=0.00062 Score=77.64 Aligned_cols=41 Identities=24% Similarity=0.413 Sum_probs=37.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~ 96 (583)
...++|+|||||++||+||..|.+.|++|+|+|+++..++.
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 45689999999999999999999999999999999887764
No 330
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.88 E-value=0.0043 Score=66.69 Aligned_cols=110 Identities=24% Similarity=0.233 Sum_probs=70.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc-------cCc---------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI-------LNM--------------------- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i-------l~~--------------------- 275 (583)
..|+|||+||+|+-+|..|.+.....+.........+....++++.+.+ +|.
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~ 119 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSF 119 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTT
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCcc
Confidence 4799999999999999998875432111111111123455666655421 110
Q ss_pred -----------------------ccHHHHHHHHHHHHhCCCEEEeCCeEEEEeC---C---------eEEEEEcCCCeeE
Q 007975 276 -----------------------FDKRITAFAEEKFSRDGIDVKLGSMVVKVTD---K---------EIFTKVRGNGETS 320 (583)
Q Consensus 276 -----------------------~~~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~---------~v~~~~~~~G~~~ 320 (583)
...++.+|++...++.+..+.++++|++|+. + .|+..+..+|+..
T Consensus 120 sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~ 199 (501)
T 4b63_A 120 TFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEIS 199 (501)
T ss_dssp SHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEE
T ss_pred chHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEE
Confidence 0135667777777777888999999999952 1 2445555567666
Q ss_pred EeecceEEEccCC
Q 007975 321 SMPYGMVVWSTGI 333 (583)
Q Consensus 321 ~i~~D~vI~a~G~ 333 (583)
++.++.||+|+|.
T Consensus 200 ~~~ar~vVlatG~ 212 (501)
T 4b63_A 200 ARRTRKVVIAIGG 212 (501)
T ss_dssp EEEEEEEEECCCC
T ss_pred EEEeCEEEECcCC
Confidence 7999999999994
No 331
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.85 E-value=0.0047 Score=64.32 Aligned_cols=51 Identities=14% Similarity=0.238 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhCCCEEEeCCeEE---------EEeC--CeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 280 ITAFAEEKFSRDGIDVKLGSMVV---------KVTD--KEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 280 ~~~~~~~~L~~~GV~v~~~~~V~---------~v~~--~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
+.+.+.+.+++.|++++.+++|+ ++.. +.+.+. +.+| ++.+|.||.|+|..
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~-~~~g---~i~a~~VV~A~G~~ 235 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVV-HETR---QIRAGVIIVAAGAA 235 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------C-BCCE---EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEE-ECCc---EEECCEEEECCCcc
Confidence 55666777888999999999999 8753 344333 2334 39999999999943
No 332
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=96.85 E-value=0.00049 Score=73.20 Aligned_cols=55 Identities=15% Similarity=0.072 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHhCCCEEEeCCeEEEEeC---CeEEEEEcCCCeeEEeecceEEEccCCC
Q 007975 278 KRITAFAEEKFSRDGIDVKLGSMVVKVTD---KEIFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 278 ~~~~~~~~~~L~~~GV~v~~~~~V~~v~~---~~v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
.++.+.+.+.+++.|++++++++|++|.- +.++...+.+|+. +.||.||.+++..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~--i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEI--AYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCE--EEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcE--EECCEEEECCCcc
Confidence 47788888999999999999999999853 4454444455765 9999999999865
No 333
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.83 E-value=0.0055 Score=66.66 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEE--EcCCCeeEEeecceEEEccCCC
Q 007975 279 RITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTK--VRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 279 ~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~--~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
.+.+.+.+.+++. |+++++|++++ ++++++. +..+|+..++.+|.||.|.|..
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~ 195 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGAS 195 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCC
Confidence 4555666666665 88999999985 3455543 3234654469999999999953
No 334
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.82 E-value=0.0086 Score=65.84 Aligned_cols=54 Identities=15% Similarity=0.025 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhCC-CEEEeCCeEEEEe--CCe---EEEEEcCCCeeEEeecceEEEccCC
Q 007975 280 ITAFAEEKFSRDG-IDVKLGSMVVKVT--DKE---IFTKVRGNGETSSMPYGMVVWSTGI 333 (583)
Q Consensus 280 ~~~~~~~~L~~~G-V~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vI~a~G~ 333 (583)
+...+.+.+++.| |+++.++.|+++. ++. +.+.+..+|+...+.++.||+|+|.
T Consensus 136 l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg 195 (602)
T 1kf6_A 136 MLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGG 195 (602)
T ss_dssp HHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCC
T ss_pred HHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCC
Confidence 3444555566678 9999999999984 443 4444445687556999999999994
No 335
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=96.80 E-value=0.0086 Score=64.88 Aligned_cols=52 Identities=17% Similarity=0.237 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhCCCEEEeCCeEEEEeC--Ce-E-EEEEcCCCeeEEeecceEEEccCCCC
Q 007975 280 ITAFAEEKFSRDGIDVKLGSMVVKVTD--KE-I-FTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 280 ~~~~~~~~L~~~GV~v~~~~~V~~v~~--~~-v-~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
+.+.+.+.+++.||+++.+ +|++++. ++ + .+. ..+|++ +.+|.||.|+|...
T Consensus 167 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~-~~~g~~--i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 167 VADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLL-TKEGRT--LEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEE-ETTSCE--ECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEE-ECCCcE--EEeCEEEECCCCch
Confidence 3455666677789999999 8999863 32 3 333 345754 99999999999543
No 336
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=96.77 E-value=0.029 Score=56.77 Aligned_cols=138 Identities=14% Similarity=0.133 Sum_probs=84.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC-----------------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN----------------------------- 274 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~----------------------------- 274 (583)
..|+|||||++|+.+|..+++.. ++.+|+|+++.+.+..
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~------------~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~ 147 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLR------------PDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPY 147 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHC------------TTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCC
T ss_pred CCEEEECccHHHHHHHHHHHhcC------------CCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcc
Confidence 48999999999999999998751 2578999988754310
Q ss_pred ---------cccHHHHHHHHHHHHh-CCCEEEeCCeEEEEe--C-----------------C--e---EEEEEc---CCC
Q 007975 275 ---------MFDKRITAFAEEKFSR-DGIDVKLGSMVVKVT--D-----------------K--E---IFTKVR---GNG 317 (583)
Q Consensus 275 ---------~~~~~~~~~~~~~L~~-~GV~v~~~~~V~~v~--~-----------------~--~---v~~~~~---~~G 317 (583)
.....+.+.+.+.+.+ .||+++.++.++++. + + . |++... .+|
T Consensus 148 ~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g 227 (344)
T 3jsk_A 148 EDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHH 227 (344)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTS
T ss_pred cccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccC
Confidence 0023344566666777 599999999998873 2 1 2 222210 112
Q ss_pred ------eeEEeecceEEEccCCCCchhHH---HHHHHhCcCC--Ccc----------eEeCCCCccCCCCCEEEcCcccc
Q 007975 318 ------ETSSMPYGMVVWSTGIAPHAIIK---DFMKQVGQTN--RRA----------LATDEWLRVEGSDSIYALGDCAT 376 (583)
Q Consensus 318 ------~~~~i~~D~vI~a~G~~~~p~~~---~l~~~~~~~~--~g~----------i~Vd~~l~~~~~~~VyAiGD~a~ 376 (583)
+..++.++.||.|+|... +... .-+..+++.. .|. .+|+.+-++ +|++|+.|=.++
T Consensus 228 ~~~~~~d~~~i~Ak~VV~ATG~~s-~v~~~~~~~l~~~~~~~~~~g~~~~~~~~~e~~~v~~t~~v--~~gl~~~gm~~~ 304 (344)
T 3jsk_A 228 DDQSAMDPNTINAPVIISTTGHDG-PFGAFSVKRLVSMKQMERLNGMRGLDMQSAEDAIVNNTREI--VPGLIVGGMELS 304 (344)
T ss_dssp SSSSCCBCEEEECSEEEECCCSSS-SSSCHHHHHHHHTTSSSCCCCCEEECHHHHHHHHHHTCEEE--ETTEEECGGGHH
T ss_pred CcccccCceEEEcCEEEECCCCCc-hhhHHHHHHHhhcCcccccCCCcccccccchhhhcccCceE--cCCEEEechhhH
Confidence 224599999999999643 2221 2233444421 121 122223333 699999987764
No 337
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=96.71 E-value=0.00067 Score=76.72 Aligned_cols=40 Identities=25% Similarity=0.408 Sum_probs=36.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAF 95 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~ 95 (583)
...++|+|||||++|+++|..|++.|++|+|+|+++..++
T Consensus 334 ~~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 334 YHNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp GTSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 4468999999999999999999999999999999887665
No 338
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.70 E-value=0.00079 Score=71.79 Aligned_cols=41 Identities=22% Similarity=0.357 Sum_probs=35.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCCCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRNYFAFTP 97 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~~~~~~p 97 (583)
..++|+|||||++|+++|..|.+.|+ +|+|+|+++..++..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~ 44 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRM 44 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCce
Confidence 35799999999999999999999998 899999998876653
No 339
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.65 E-value=0.0008 Score=75.06 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCC-----CCCeEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN-----PSYDVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~-----~g~~Vtlie~~~~ 92 (583)
..+|+|||||++|+++|..|++ .|++|+|||+++.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 4689999999999999999999 9999999998754
No 340
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.63 E-value=0.00091 Score=73.23 Aligned_cols=57 Identities=16% Similarity=0.119 Sum_probs=42.4
Q ss_pred cHHHHHHHHHHHHhCCCEEEeCCeEEEEe--CCe---EEEEEcCCCeeEEeecceEEEccCC
Q 007975 277 DKRITAFAEEKFSRDGIDVKLGSMVVKVT--DKE---IFTKVRGNGETSSMPYGMVVWSTGI 333 (583)
Q Consensus 277 ~~~~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vI~a~G~ 333 (583)
+..+...+.+.+++.|++|+.+++|+++. ++. |++.+..+|+..++.+|.||.|+|.
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ 248 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGP 248 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCCh
Confidence 45666777788889999999999999985 344 4444332455445999999999994
No 341
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.63 E-value=0.00081 Score=74.76 Aligned_cols=35 Identities=20% Similarity=0.156 Sum_probs=32.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
..+|||||||.+|++||..|++.|++|+|||+...
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 46999999999999999999999999999999753
No 342
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=96.63 E-value=0.014 Score=58.77 Aligned_cols=70 Identities=14% Similarity=0.137 Sum_probs=51.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc----------------------------
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM---------------------------- 275 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~---------------------------- 275 (583)
.+|+|||+|++|+.+|..+++.. ++.+|+|+++.+.+...
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~------------~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~ 133 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNR------------PDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPY 133 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHC------------TTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCC
T ss_pred CCEEEECccHHHHHHHHHHHhcC------------CCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCccc
Confidence 48999999999999999998751 24689999886543200
Q ss_pred ----------ccHHHHHHHHHHHHhC-CCEEEeCCeEEEEe
Q 007975 276 ----------FDKRITAFAEEKFSRD-GIDVKLGSMVVKVT 305 (583)
Q Consensus 276 ----------~~~~~~~~~~~~L~~~-GV~v~~~~~V~~v~ 305 (583)
....+...+.+.+.+. ||+++.+++|+++.
T Consensus 134 ~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll 174 (326)
T 2gjc_A 134 EDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLV 174 (326)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEE
T ss_pred ccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeee
Confidence 1233455566666664 99999999999884
No 343
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.59 E-value=0.012 Score=64.29 Aligned_cols=33 Identities=36% Similarity=0.600 Sum_probs=29.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCC
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (583)
..|+|||||.+|+-+|..++.. +.+|+|+|+.+
T Consensus 33 ~DVvVIGgGi~G~~~A~~La~r--------------G~~V~LlE~~~ 65 (571)
T 2rgh_A 33 LDLLIIGGGITGAGVAVQAAAS--------------GIKTGLIEMQD 65 (571)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCcEEEEeCCC
Confidence 3899999999999999999875 57999999764
No 344
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=96.45 E-value=0.0012 Score=72.86 Aligned_cols=34 Identities=21% Similarity=0.299 Sum_probs=31.8
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..+|||||||.||++||..|++.|++|+|||+..
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 4699999999999999999999999999999874
No 345
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.41 E-value=0.022 Score=60.61 Aligned_cols=52 Identities=17% Similarity=0.134 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhCCCEEEeCCeEEEEe--CCeEEEE-Ec-CCCeeEEeecceEEEccCCCC
Q 007975 280 ITAFAEEKFSRDGIDVKLGSMVVKVT--DKEIFTK-VR-GNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 280 ~~~~~~~~L~~~GV~v~~~~~V~~v~--~~~v~~~-~~-~~G~~~~i~~D~vI~a~G~~~ 335 (583)
+.+.+.+.+++.||+++.++.| ++. ++.+.-. .. .+|+ +.+|.||+|+|..+
T Consensus 121 l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~---~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 121 IFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLV---EDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEE---CCCSEEEECCCCCG
T ss_pred HHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCe---EEeeeEEECCCCCc
Confidence 3455566667789999999999 884 4444211 11 2232 77999999999543
No 346
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=96.37 E-value=0.0018 Score=71.97 Aligned_cols=35 Identities=11% Similarity=0.341 Sum_probs=31.9
Q ss_pred CCeEEEECCcHHHHHHHHhcC---C-CCCeEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLN---N-PSYDVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~---~-~g~~Vtlie~~~~ 92 (583)
..+|||||||+||++||..|+ + .|.+|+||||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 479999999999999999999 6 8999999999763
No 347
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.32 E-value=0.031 Score=60.71 Aligned_cols=53 Identities=13% Similarity=0.147 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhC-CCEEEeCCeEEEEeC--Ce--EEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 279 RITAFAEEKFSRD-GIDVKLGSMVVKVTD--KE--IFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 279 ~~~~~~~~~L~~~-GV~v~~~~~V~~v~~--~~--v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
.+.+.+.+.+++. ||+++.+ +|++++. ++ +.+. ..+|++ +.+|.||.|+|...
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~-~~~G~~--i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVR-TATGRV--FDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEE-ETTSCE--EECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEE-ECCCCE--EECCEEEECCCCch
Confidence 4566677777787 9999999 9999952 33 3333 345754 99999999999543
No 348
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=96.18 E-value=0.0012 Score=73.31 Aligned_cols=36 Identities=25% Similarity=0.432 Sum_probs=33.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCC--------CeEEEEcCCC-CC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPS--------YDVQVISPRN-YF 93 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g--------~~Vtlie~~~-~~ 93 (583)
+++|+|||||++||+||+.|.+.| ++|+|+|+++ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 579999999999999999998777 9999999998 76
No 349
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.03 E-value=0.0029 Score=68.76 Aligned_cols=36 Identities=14% Similarity=0.210 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
..+++||||+|++|+.+|.+|++.|++|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 458999999999999999999989999999999864
No 350
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.03 E-value=0.031 Score=60.26 Aligned_cols=52 Identities=12% Similarity=0.142 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHh-CCCEEEeCCeEEEEeC--Ce-E-EEEEcCCCeeEEeecceEEEccCCC
Q 007975 279 RITAFAEEKFSR-DGIDVKLGSMVVKVTD--KE-I-FTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 279 ~~~~~~~~~L~~-~GV~v~~~~~V~~v~~--~~-v-~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
.+.+.+.+.+++ .||+++.+ +|++++. ++ + .+.. .+|++ +.+|.||.|+|..
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~-~~g~~--i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLIT-KQNGE--ISGQLFIDCTGAK 232 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEE-SSSCE--EECSEEEECSGGG
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEE-CCCCE--EEcCEEEECCCcc
Confidence 344555666777 89999999 5999852 33 2 3333 44654 9999999999964
No 351
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.02 E-value=0.035 Score=61.68 Aligned_cols=21 Identities=38% Similarity=0.645 Sum_probs=19.6
Q ss_pred ceEEEEcCChhHHHHHHHHHH
Q 007975 224 LHFVIVGGGPTGVEFAAELHD 244 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~ 244 (583)
..|+|||||++|+-+|..|++
T Consensus 9 ~dVlIVGaGpaGL~lA~~La~ 29 (665)
T 1pn0_A 9 CDVLIVGAGPAGLMAARVLSE 29 (665)
T ss_dssp EEEEEECCSHHHHHHHHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHhc
Confidence 379999999999999999998
No 352
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.94 E-value=0.056 Score=59.48 Aligned_cols=54 Identities=11% Similarity=0.015 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCCEEEeCCeEEEEe--CCe---EEEEEcCCCeeEEeecceEEEccCCC
Q 007975 281 TAFAEEKFSRDGIDVKLGSMVVKVT--DKE---IFTKVRGNGETSSMPYGMVVWSTGIA 334 (583)
Q Consensus 281 ~~~~~~~L~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vI~a~G~~ 334 (583)
...+.+.+.+.||+|+.++.|+++. ++. +.+.+..+|+...+.++.||+|+|-.
T Consensus 158 ~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~ 216 (621)
T 2h88_A 158 LHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGY 216 (621)
T ss_dssp HHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcc
Confidence 3344455566799999999999884 443 44444356775569999999999953
No 353
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=95.80 E-value=0.0054 Score=66.18 Aligned_cols=35 Identities=26% Similarity=0.428 Sum_probs=32.2
Q ss_pred CCeEEEECCcHHHHHHHHhcCC-CCCeEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~-~g~~Vtlie~~~~ 92 (583)
.+|+||||||+||+.+|.+|++ .+++|+|||+.+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 5899999999999999999996 7899999998864
No 354
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=95.80 E-value=0.056 Score=59.92 Aligned_cols=53 Identities=9% Similarity=0.051 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCCEEEeCCeEEEEe--CCe---EEEEEcCCCeeEEeecceEEEccCC
Q 007975 281 TAFAEEKFSRDGIDVKLGSMVVKVT--DKE---IFTKVRGNGETSSMPYGMVVWSTGI 333 (583)
Q Consensus 281 ~~~~~~~L~~~GV~v~~~~~V~~v~--~~~---v~~~~~~~G~~~~i~~D~vI~a~G~ 333 (583)
...+.+.+++.||+|+.++.|+++. ++. +.+.++.+|+...+.++.||+|+|-
T Consensus 161 ~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 161 LFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 3444555566799999999999884 343 4444445677656999999999984
No 355
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=95.79 E-value=0.054 Score=58.04 Aligned_cols=35 Identities=40% Similarity=0.624 Sum_probs=28.2
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCC
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (583)
+|+|||||++|.-+|..|++... .+.+|+|+|+.+
T Consensus 4 dVvIVGgG~aGl~~A~~La~~~~-----------~G~~V~lvE~~~ 38 (511)
T 2weu_A 4 SVVIVGGGTAGWMTASYLKAAFD-----------DRIDVTLVESGN 38 (511)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHG-----------GGSEEEEEEC--
T ss_pred eEEEECCCHHHHHHHHHHHhhcC-----------CCCEEEEEecCC
Confidence 89999999999999999988321 157999999865
No 356
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.58 E-value=0.029 Score=60.71 Aligned_cols=49 Identities=22% Similarity=0.138 Sum_probs=34.8
Q ss_pred HHHh-CCCEEEeCCeEEEEe--C-C------e---EEEEEcCCCeeEEeecceEEEccCCCC
Q 007975 287 KFSR-DGIDVKLGSMVVKVT--D-K------E---IFTKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 287 ~L~~-~GV~v~~~~~V~~v~--~-~------~---v~~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
.+++ .||+|+.++.|+++. + + . +.+.+..+|+..++.++.||+|+|-..
T Consensus 147 ~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 147 KALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp HHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 3445 689999999999984 2 3 3 344433457655699999999999533
No 357
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.55 E-value=0.0096 Score=51.99 Aligned_cols=36 Identities=17% Similarity=0.205 Sum_probs=32.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..+.+|+|+|+|.-|..+|..|...|++|+++|+++
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 446799999999999999999999999999999873
No 358
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.50 E-value=0.0066 Score=65.80 Aligned_cols=35 Identities=23% Similarity=0.412 Sum_probs=32.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
..+++||||||.||+.+|.+|++ +.+|+|+|+.+.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 35899999999999999999999 999999999865
No 359
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=95.37 E-value=0.011 Score=64.59 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCC-CeEEEEcCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g-~~Vtlie~~~~ 92 (583)
..+++||||||.||+.+|.+|++.+ .+|.|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3589999999999999999999776 79999999865
No 360
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.22 E-value=0.015 Score=55.43 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=30.8
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i 272 (583)
.|+||||||+|+-+|..|++. +.+|+|+|+.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~--------------G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA--------------GHQVHLFDKSRGS 37 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCCCC
Confidence 799999999999999999985 6899999998765
No 361
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.09 E-value=0.014 Score=51.69 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=31.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
..++|+|+|+|..|...+..|...|++|++||++
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 4578999999999999999999899999999986
No 362
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.08 E-value=0.013 Score=64.33 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=34.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCC-CCCeEEEEcCCCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYF 93 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~-~g~~Vtlie~~~~~ 93 (583)
+..++++|||+|++|+.+|.+|.+ .+.+|+|||+....
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 456899999999999999999998 89999999998754
No 363
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=95.08 E-value=0.0099 Score=63.87 Aligned_cols=37 Identities=16% Similarity=0.266 Sum_probs=33.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~ 94 (583)
.++++|||+|++|+.+|..|.+.|.+|+|||+...+.
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5799999999999999999999999999999987544
No 364
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=95.04 E-value=0.014 Score=63.60 Aligned_cols=36 Identities=25% Similarity=0.482 Sum_probs=32.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCC-CCCeEEEEcCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~-~g~~Vtlie~~~~ 92 (583)
..+++||||||.||+.+|.+|++ .+.+|+|||+.+.
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~ 54 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSY 54 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 46899999999999999999995 6899999999873
No 365
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=94.99 E-value=0.16 Score=57.40 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=31.3
Q ss_pred CCCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccC
Q 007975 291 DGIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTG 332 (583)
Q Consensus 291 ~GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G 332 (583)
.|++|+++++|++|+ ++++++.. .+|+. +.+|.||+|+.
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~-~~G~~--i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTT-TDGTG--YSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEE-TTCCE--EEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEE-CCCcE--EEcCEEEECCC
Confidence 378999999999996 45677665 45664 99999999986
No 366
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=94.97 E-value=0.012 Score=63.18 Aligned_cols=37 Identities=16% Similarity=0.374 Sum_probs=33.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYF 93 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~ 93 (583)
..++++|||+|++|+.+|..|.+.+.+|+|||+....
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 46 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSW 46 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4589999999999999999999999999999998653
No 367
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.97 E-value=0.015 Score=51.64 Aligned_cols=35 Identities=23% Similarity=0.370 Sum_probs=31.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
...+|+|+|+|..|..+|..|...|++|+++|+++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45789999999999999999998899999999874
No 368
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=94.88 E-value=0.017 Score=62.70 Aligned_cols=37 Identities=19% Similarity=0.286 Sum_probs=33.3
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCC-CCeEEEEcCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRNYF 93 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~-g~~Vtlie~~~~~ 93 (583)
..++++|||+|.+|+.+|.+|++. +.+|+|||+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 458999999999999999999986 8999999998653
No 369
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.85 E-value=0.015 Score=50.62 Aligned_cols=33 Identities=18% Similarity=0.390 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
+++|+|+|+|.-|..+|..|.+.|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 578999999999999999999999999999986
No 370
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=94.79 E-value=0.013 Score=63.85 Aligned_cols=36 Identities=28% Similarity=0.321 Sum_probs=32.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCC-CCCeEEEEcCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNN-PSYDVQVISPRNYF 93 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~-~g~~Vtlie~~~~~ 93 (583)
.+++||||||.||+.+|.+|++ .+++|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 3799999999999999999997 79999999998654
No 371
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.66 E-value=0.017 Score=48.11 Aligned_cols=33 Identities=27% Similarity=0.412 Sum_probs=30.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCC-CeEEEEcCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPS-YDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g-~~Vtlie~~ 90 (583)
+++|+|+|+|..|..++..|...| ++|++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 468999999999999999999888 999999986
No 372
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.62 E-value=0.02 Score=49.38 Aligned_cols=32 Identities=22% Similarity=0.417 Sum_probs=30.0
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
++|+|+|+|..|...|..|.+.|++|+++|++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 58999999999999999999889999999976
No 373
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=94.48 E-value=0.14 Score=56.51 Aligned_cols=51 Identities=12% Similarity=0.065 Sum_probs=35.1
Q ss_pred HHHHHhC-CC-EEEeCCeEEEEe--CC---eEE---EEEcCCCeeEEeecceEEEccCCCC
Q 007975 285 EEKFSRD-GI-DVKLGSMVVKVT--DK---EIF---TKVRGNGETSSMPYGMVVWSTGIAP 335 (583)
Q Consensus 285 ~~~L~~~-GV-~v~~~~~V~~v~--~~---~v~---~~~~~~G~~~~i~~D~vI~a~G~~~ 335 (583)
.+.+++. || +|+.++.|+++. ++ .+. +.+..+|+...+.++.||+|+|-..
T Consensus 158 ~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 158 AEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp HHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 3344455 89 999999999884 34 443 3333457655689999999999543
No 374
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=94.42 E-value=0.029 Score=57.59 Aligned_cols=32 Identities=31% Similarity=0.419 Sum_probs=28.9
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCC
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (583)
+|+|||||+.|++.|..+++. +.+|+|+++.+
T Consensus 3 dViVIGgG~AG~~AA~~la~~--------------G~~V~liE~~~ 34 (443)
T 3g5s_A 3 RVNVVGAGLAGSEAAWTLLRL--------------GVPVRLFEMRP 34 (443)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCEEEECCTT
T ss_pred CEEEECchHHHHHHHHHHHHC--------------CCcEEEEeccC
Confidence 799999999999999999885 67999999765
No 375
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.39 E-value=0.048 Score=54.91 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHH-HHHhcCCCCCeEEEEcCCCC
Q 007975 57 KKKKVVVLGTGWAGTS-FLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~-aA~~L~~~g~~Vtlie~~~~ 92 (583)
.+++|.|||.|-+|++ +|+.|.+.|++|++.|.+..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 3679999999999997 78888899999999998753
No 376
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.75 E-value=0.043 Score=51.94 Aligned_cols=35 Identities=26% Similarity=0.450 Sum_probs=32.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
.+.++|+|||||..|...+..|.+.|.+|+||+++
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 34689999999999999999999999999999975
No 377
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.51 E-value=0.034 Score=48.07 Aligned_cols=33 Identities=27% Similarity=0.422 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
+++|+|+|+|..|..+|..|.+.|++|+++|++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999999999999999999889999999976
No 378
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=93.09 E-value=0.048 Score=54.74 Aligned_cols=69 Identities=17% Similarity=0.137 Sum_probs=47.8
Q ss_pred cceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-------cc-HHHHHHHHHHHHhCCCE
Q 007975 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-------FD-KRITAFAEEKFSRDGID 294 (583)
Q Consensus 223 ~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-------~~-~~~~~~~~~~L~~~GV~ 294 (583)
...|+|||+||.|+-+|..|+... .+.+|+|+|+.+.+... ++ ..+.+.+.+.+++.||+
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r------------~G~~V~viEk~~~~GG~~~~~~~~~~~~~l~~~~~~~~~e~Gv~ 132 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNR------------PDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP 132 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHC------------TTSCEEEECSSSSCCTTTTCCSTTCCCEEEETTTHHHHHHTTCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhC------------CCCeEEEEECCCCCCceEEeCCccCCHHHHHHHHHHHHHHcCCE
Confidence 458999999999999999997531 26899999998764221 00 11223345667888999
Q ss_pred EEeCCeEEE
Q 007975 295 VKLGSMVVK 303 (583)
Q Consensus 295 v~~~~~V~~ 303 (583)
+..+.....
T Consensus 133 ~~~~~~~~~ 141 (326)
T 3fpz_A 133 YEDEGDYVV 141 (326)
T ss_dssp CEECSSEEE
T ss_pred EEECCccee
Confidence 887765443
No 379
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=93.02 E-value=0.059 Score=59.17 Aligned_cols=40 Identities=20% Similarity=0.338 Sum_probs=37.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFAFT 96 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~~~ 96 (583)
+.++|+|||+|..|..+|..|++.|.+|.+||+++++++.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~ 46 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGN 46 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCc
Confidence 3689999999999999999999999999999999998764
No 380
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.88 E-value=0.044 Score=53.59 Aligned_cols=35 Identities=26% Similarity=0.457 Sum_probs=32.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+.++|+|||||-.|...+..|.+.|++|+||+++.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45799999999999999999999999999999763
No 381
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.84 E-value=0.069 Score=53.01 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
.+++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45789999999999999999998999999999874
No 382
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.73 E-value=0.058 Score=49.12 Aligned_cols=35 Identities=26% Similarity=0.293 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCC-CCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNP-SYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~-g~~Vtlie~~~ 91 (583)
...+|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 356899999999999999999988 99999999873
No 383
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.61 E-value=0.069 Score=56.87 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=29.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il 273 (583)
|+|+|||+|.+|+-+|..|++. |.+|+|+|+.+++.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~--------------G~~V~VlEa~~~~G 37 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAA--------------GIPVLLLEQRDKPG 37 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--------------TCCEEEECCC----
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCcEEEEccCCCCC
Confidence 5899999999999999999885 68999999988764
No 384
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.49 E-value=0.063 Score=56.47 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
.++|+|||.|.+|+++|+.|.+.|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 47899999999999999999999999999998764
No 385
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.48 E-value=0.37 Score=50.73 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=54.0
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeE
Q 007975 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMV 301 (583)
Q Consensus 222 ~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V 301 (583)
++++|.|||.|.+|+.+|..|.+. +.+|+..+..+... ++ ..+.|++.||+++.+...
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~--------------G~~V~~~D~~~~~~---~~-----~~~~L~~~gi~~~~g~~~ 65 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKL--------------GAIVTVNDGKPFDE---NP-----TAQSLLEEGIKVVCGSHP 65 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHT--------------TCEEEEEESSCGGG---CH-----HHHHHHHTTCEEEESCCC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--------------CCEEEEEeCCcccC---Ch-----HHHHHHhCCCEEEECCCh
Confidence 457999999999999988877765 68999999875321 11 235788899999887531
Q ss_pred EEEeCCeEEEEEcCCCeeEEee-cceEEEccCCCC
Q 007975 302 VKVTDKEIFTKVRGNGETSSMP-YGMVVWSTGIAP 335 (583)
Q Consensus 302 ~~v~~~~v~~~~~~~G~~~~i~-~D~vI~a~G~~~ 335 (583)
. +. .-. +|.||.++|+.+
T Consensus 66 ~---------------~~-~~~~~d~vv~spgi~~ 84 (451)
T 3lk7_A 66 L---------------EL-LDEDFCYMIKNPGIPY 84 (451)
T ss_dssp G---------------GG-GGSCEEEEEECTTSCT
T ss_pred H---------------Hh-hcCCCCEEEECCcCCC
Confidence 1 10 012 688999999744
No 386
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.23 E-value=0.13 Score=44.86 Aligned_cols=33 Identities=21% Similarity=0.469 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
.++|+|||+|..|...+..|...|++|++++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 479999999999999999999899999999987
No 387
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.23 E-value=0.49 Score=47.43 Aligned_cols=71 Identities=20% Similarity=0.139 Sum_probs=51.5
Q ss_pred cceEEEEcCChhHHH-HHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeE
Q 007975 223 ILHFVIVGGGPTGVE-FAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMV 301 (583)
Q Consensus 223 ~~~vvVVGgG~tgvE-~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V 301 (583)
.++|.|||.|-+|+. +|..|.+. +.+|++.+..+.. + ..+.|++.||+++.+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--------------G~~V~~~D~~~~~-----~-----~~~~L~~~gi~v~~g~~~ 59 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--------------GFEVSGCDAKMYP-----P-----MSTQLEALGIDVYEGFDA 59 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--------------TCEEEEEESSCCT-----T-----HHHHHHHTTCEEEESCCG
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--------------CCEEEEEcCCCCc-----H-----HHHHHHhCCCEEECCCCH
Confidence 459999999999997 66666664 6899999987531 1 235688889999876321
Q ss_pred EEEeCCeEEEEEcCCCeeEEe---ecceEEEccCCCC
Q 007975 302 VKVTDKEIFTKVRGNGETSSM---PYGMVVWSTGIAP 335 (583)
Q Consensus 302 ~~v~~~~v~~~~~~~G~~~~i---~~D~vI~a~G~~~ 335 (583)
+. + .+|.||.++|+.+
T Consensus 60 ----------------~~--l~~~~~d~vV~Spgi~~ 78 (326)
T 3eag_A 60 ----------------AQ--LDEFKADVYVIGNVAKR 78 (326)
T ss_dssp ----------------GG--GGSCCCSEEEECTTCCT
T ss_pred ----------------HH--cCCCCCCEEEECCCcCC
Confidence 11 2 4799999999754
No 388
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=91.82 E-value=0.31 Score=45.95 Aligned_cols=108 Identities=16% Similarity=0.162 Sum_probs=62.1
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeE
Q 007975 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMV 301 (583)
Q Consensus 222 ~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V 301 (583)
++++|+|||||.+|...+..|.+. +.+|+++.+. +.+++ .+..++.+|+++...-
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--------------GA~VtVvap~------~~~~l----~~l~~~~~i~~i~~~~- 84 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--------------GAAITVVAPT------VSAEI----NEWEAKGQLRVKRKKV- 84 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--------------CCCEEEECSS------CCHHH----HHHHHTTSCEEECSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--------------CCEEEEECCC------CCHHH----HHHHHcCCcEEEECCC-
Confidence 567999999999999999888775 6799999753 23343 3333445677654311
Q ss_pred EEEeCCeEEEEEcCCCeeEEeecceEEEccCCCCchhHHHHHHHhCcCCCcceEeCC----CCccCCCCCEEEcCccc
Q 007975 302 VKVTDKEIFTKVRGNGETSSMPYGMVVWSTGIAPHAIIKDFMKQVGQTNRRALATDE----WLRVEGSDSIYALGDCA 375 (583)
Q Consensus 302 ~~v~~~~v~~~~~~~G~~~~i~~D~vI~a~G~~~~p~~~~l~~~~~~~~~g~i~Vd~----~l~~~~~~~VyAiGD~a 375 (583)
+ .+.. -.+|+||.|||. .. +....... ..+ +|.||- .+-.--.|-|+--||..
T Consensus 85 ---~----------~~dL--~~adLVIaAT~d--~~-~N~~I~~~--ak~-gi~VNvvD~p~~~~f~~Paiv~rg~l~ 141 (223)
T 3dfz_A 85 ---G----------EEDL--LNVFFIVVATND--QA-VNKFVKQH--IKN-DQLVNMASSFSDGNIQIPAQFSRGRLS 141 (223)
T ss_dssp ---C----------GGGS--SSCSEEEECCCC--TH-HHHHHHHH--SCT-TCEEEC-----CCSEECCEEEEETTEE
T ss_pred ---C----------HhHh--CCCCEEEECCCC--HH-HHHHHHHH--HhC-CCEEEEeCCcccCeEEEeeEEEeCCEE
Confidence 0 0111 348999999983 32 22222222 122 345542 22222346676667654
No 389
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.65 E-value=0.084 Score=49.59 Aligned_cols=31 Identities=19% Similarity=0.381 Sum_probs=29.6
Q ss_pred eEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 60 KVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 60 ~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
+|+|+|+|.-|...|..|...|++|+++|++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 7999999999999999999899999999976
No 390
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=91.49 E-value=0.15 Score=55.80 Aligned_cols=33 Identities=30% Similarity=0.586 Sum_probs=29.6
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCC
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (583)
.+|+|||||++|+-+|..|++. +.+|+|+|+.+
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~--------------G~~V~LiEr~~ 56 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKL--------------GHDVTIYERSA 56 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHcC--------------CCCEEEEcCCC
Confidence 4899999999999999999875 68999999875
No 391
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=91.45 E-value=0.1 Score=55.00 Aligned_cols=35 Identities=29% Similarity=0.301 Sum_probs=32.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..++|+|||.|.+|+++|+.|.+.|++|++.|.++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 46899999999999999999999999999999875
No 392
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.24 E-value=0.14 Score=50.39 Aligned_cols=35 Identities=23% Similarity=0.257 Sum_probs=32.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 35799999999999999999999999999999874
No 393
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.11 E-value=0.14 Score=54.04 Aligned_cols=33 Identities=24% Similarity=0.541 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
..+|+|+|+|-.|.+.|..|...|++|+|||++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 358999999999999999999999999999987
No 394
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.11 E-value=0.13 Score=52.46 Aligned_cols=35 Identities=11% Similarity=0.126 Sum_probs=32.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
|++|+|||||.-|..+++.+++.|++|+++|+++.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 68999999999999999999999999999998764
No 395
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=90.77 E-value=0.15 Score=52.55 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=31.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5799999999999999999998999999999884
No 396
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=90.75 E-value=0.14 Score=51.22 Aligned_cols=32 Identities=28% Similarity=0.361 Sum_probs=30.3
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
++|.|||+|.-|...|..|.+.|++|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 68999999999999999999899999999986
No 397
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.75 E-value=0.16 Score=53.10 Aligned_cols=40 Identities=18% Similarity=0.146 Sum_probs=35.1
Q ss_pred CCCCCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 52 PEMGIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 52 ~~~~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
.+..+.+.+|.|||.|+.|+..|..|++.|++|+.+|-++
T Consensus 15 ~p~~~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 15 VPRGSHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCTTCCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCCCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3455678899999999999999999999999999999763
No 398
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.74 E-value=0.15 Score=49.66 Aligned_cols=34 Identities=12% Similarity=0.273 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+++|+|.|+|+.|-..+..|.+.|++|++++|++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 4789999999999999999999999999999863
No 399
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=90.74 E-value=0.16 Score=51.83 Aligned_cols=34 Identities=29% Similarity=0.338 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+++|.|||+|.-|...|..|.+.|++|+++++++
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3489999999999999999999999999999873
No 400
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=90.70 E-value=0.23 Score=52.84 Aligned_cols=36 Identities=22% Similarity=0.536 Sum_probs=29.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i 272 (583)
..|+|||||.+|+-+|..|++. .+.+|+|+|+.+++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~-------------~G~~V~VlE~~~~~ 46 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQI-------------DGPSWMIVDSNETP 46 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH-------------CCSCEEEEESSSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhh-------------CCCCEEEEECCCCC
Confidence 4899999999999999999864 25788888877664
No 401
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=90.66 E-value=0.15 Score=51.27 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~ 91 (583)
+.+|+|||+|..|.++|..|+..|+ +|+|+|.++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999998887 999999874
No 402
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=90.57 E-value=0.24 Score=52.65 Aligned_cols=60 Identities=23% Similarity=0.248 Sum_probs=44.6
Q ss_pred cceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcc----------c--------HHHHHHH
Q 007975 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMF----------D--------KRITAFA 284 (583)
Q Consensus 223 ~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~----------~--------~~~~~~~ 284 (583)
..+|+|||||.+|+.+|..|.+. +.+|+|+|+.+++.... . ......+
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~--------------g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 98 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGA--------------GHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPEKHRIV 98 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH--------------TCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEETTCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccchHHHH
Confidence 45899999999999999999875 57999999988764421 0 0113456
Q ss_pred HHHHHhCCCEEE
Q 007975 285 EEKFSRDGIDVK 296 (583)
Q Consensus 285 ~~~L~~~GV~v~ 296 (583)
.+.+++.|+++.
T Consensus 99 ~~~~~~~g~~~~ 110 (498)
T 2iid_A 99 REYIRKFDLRLN 110 (498)
T ss_dssp HHHHHHTTCCEE
T ss_pred HHHHHHhCCCce
Confidence 777888888754
No 403
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=90.53 E-value=0.15 Score=49.77 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=32.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
++++|+|.|+|+.|-.++..|.+.|++|++++++..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 356899999999999999999988999999998743
No 404
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=90.38 E-value=0.15 Score=50.41 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=30.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
+.+|.|||+|.-|...|..|.+.|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 358999999999999999999899999999976
No 405
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=90.25 E-value=0.22 Score=52.06 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=29.9
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCC
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (583)
.+|+|||||++|+-+|..|++. +.+|+|+++.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~--------------G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQH--------------DVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT--------------TCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHC--------------CCeEEEEcCCC
Confidence 4899999999999999999885 68999999876
No 406
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=90.21 E-value=0.21 Score=50.81 Aligned_cols=36 Identities=25% Similarity=0.271 Sum_probs=32.3
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+.+.+|.|||+|.-|.+.|..|++.|++|+++++++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 345689999999999999999999999999999873
No 407
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=90.14 E-value=0.26 Score=51.09 Aligned_cols=34 Identities=32% Similarity=0.355 Sum_probs=30.5
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i 272 (583)
+|+|||||.+|+-+|..|++. +.+|+|+|+.+++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~--------------G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARN--------------GHEIIVLEKSAMI 35 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHT--------------TCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHHC--------------CCeEEEEeCCCCC
Confidence 799999999999999999875 5799999998765
No 408
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=89.92 E-value=0.15 Score=52.06 Aligned_cols=36 Identities=28% Similarity=0.357 Sum_probs=31.8
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~ 91 (583)
-...+|||+|||.||+.+|+.|...|. +|+++|++.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 345799999999999999999987788 999999873
No 409
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=89.69 E-value=0.16 Score=52.00 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=31.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
...+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35799999999999999999998899999999873
No 410
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.55 E-value=0.2 Score=49.96 Aligned_cols=34 Identities=15% Similarity=0.270 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC--eEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~--~Vtlie~~~ 91 (583)
+.+|+|||+|..|...|..|...|+ +|+++|+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3589999999999999999998888 999999873
No 411
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=89.49 E-value=0.19 Score=50.55 Aligned_cols=33 Identities=15% Similarity=0.281 Sum_probs=30.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
..+|.|||+|.-|...|..|.+.|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 468999999999999999999999999999964
No 412
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=89.45 E-value=0.3 Score=49.16 Aligned_cols=33 Identities=24% Similarity=0.419 Sum_probs=29.8
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCc
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~ 271 (583)
.|+|||||.+|+-+|..|++. +.+|+|+++.+.
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~--------------G~~V~vlE~~~~ 38 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAG--------------GHEVLVAEAAEG 38 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHhC--------------CCeEEEEeCCCC
Confidence 899999999999999999874 679999999863
No 413
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.44 E-value=0.19 Score=47.42 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=31.4
Q ss_pred CCCCeEEEECC-cHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 56 IKKKKVVVLGT-GWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 56 ~~~~~VVIIGg-G~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
.+.++|+|.|| |..|..++..|.+.|++|++++|++
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 44679999998 9999999999999999999999873
No 414
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=89.40 E-value=0.16 Score=50.66 Aligned_cols=32 Identities=22% Similarity=0.370 Sum_probs=29.4
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
++|.|||+|.-|.+.|..|.+.|++|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 68999999999999999999899999999976
No 415
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=89.38 E-value=0.54 Score=40.50 Aligned_cols=73 Identities=15% Similarity=0.267 Sum_probs=48.1
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeCCeEEE
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLGSMVVK 303 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~~~V~~ 303 (583)
.+++|+|+|..|..+|..|... +.+|+++++.+. . .+.+++.|+.++.+..-
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~--------------g~~v~vid~~~~--------~----~~~~~~~g~~~i~gd~~-- 59 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS--------------DIPLVVIETSRT--------R----VDELRERGVRAVLGNAA-- 59 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCHH--------H----HHHHHHTTCEEEESCTT--
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCCEEEEECCHH--------H----HHHHHHcCCCEEECCCC--
Confidence 3899999999999999999874 579999998642 1 13455678877654210
Q ss_pred EeCCeEEEEEcCCCeeEEeecceEEEccC
Q 007975 304 VTDKEIFTKVRGNGETSSMPYGMVVWSTG 332 (583)
Q Consensus 304 v~~~~v~~~~~~~G~~~~i~~D~vI~a~G 332 (583)
... .+.. -|- -.+|.+|.+++
T Consensus 60 --~~~-~l~~--a~i---~~ad~vi~~~~ 80 (140)
T 3fwz_A 60 --NEE-IMQL--AHL---ECAKWLILTIP 80 (140)
T ss_dssp --SHH-HHHH--TTG---GGCSEEEECCS
T ss_pred --CHH-HHHh--cCc---ccCCEEEEECC
Confidence 000 0000 011 35899999988
No 416
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.37 E-value=0.24 Score=49.44 Aligned_cols=35 Identities=34% Similarity=0.519 Sum_probs=31.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPR 90 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~ 90 (583)
++.++|.|||+|..|.++|..|+..|+ +|+|+|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 445799999999999999999988888 99999986
No 417
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=89.32 E-value=0.32 Score=50.34 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=30.5
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i 272 (583)
+|+|||||.+|+-+|..|++. +.+|+|+|+.+++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~--------------G~~V~vlE~~~~~ 35 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKA--------------GHEVEVFERLPIT 35 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHT--------------TCEEEEECSSSSS
T ss_pred cEEEECCCHHHHHHHHHHHhC--------------CCceEEEeCCCCC
Confidence 799999999999999999875 5799999998765
No 418
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=89.21 E-value=0.24 Score=49.25 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=32.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 446799999999999999999999999999999874
No 419
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=89.18 E-value=0.24 Score=49.61 Aligned_cols=36 Identities=17% Similarity=0.356 Sum_probs=31.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~ 91 (583)
+++.+|.|||+|..|.++|..|...++ +|+|+|.++
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 456799999999999999999987777 999999874
No 420
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=89.15 E-value=0.22 Score=50.36 Aligned_cols=33 Identities=27% Similarity=0.274 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
+.+|.|||+|..|...|..|.+.|++|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 468999999999999999999889999999976
No 421
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=89.10 E-value=0.19 Score=51.28 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=31.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPR 90 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~ 90 (583)
...+|||+|||-+|..+|+.|...|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45799999999999999999987787 79999987
No 422
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=89.08 E-value=0.27 Score=45.90 Aligned_cols=36 Identities=14% Similarity=0.307 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
..++|.|||+|.-|.+.|..|.+.|++|+++++++.
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 356899999999999999999989999999998764
No 423
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=89.05 E-value=0.31 Score=50.55 Aligned_cols=34 Identities=32% Similarity=0.618 Sum_probs=30.2
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i 272 (583)
+|+|||||.+|+-+|..|++. +.+|+|+|+.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~--------------G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNA--------------GKKVLLLEGGERL 36 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHT--------------TCCEEEECSSSSS
T ss_pred CEEEECCcHHHHHHHHHHHHc--------------CCeEEEEecCCCc
Confidence 799999999999999999885 5799999987654
No 424
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.00 E-value=0.28 Score=45.81 Aligned_cols=34 Identities=26% Similarity=0.603 Sum_probs=31.2
Q ss_pred CCeEEEECC-cHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGT-GWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGg-G~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+++|+|.|| |+.|..++..|.+.|++|++++|++
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 478999996 9999999999999999999999874
No 425
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.89 E-value=0.24 Score=46.95 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=29.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..++|+|+|+|..|...|..|...|+ |+++|+++
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 35689999999999999999999899 99999773
No 426
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=88.82 E-value=0.23 Score=49.72 Aligned_cols=35 Identities=17% Similarity=0.373 Sum_probs=31.1
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45799999999999999999999999999999874
No 427
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=88.80 E-value=0.29 Score=51.24 Aligned_cols=41 Identities=34% Similarity=0.524 Sum_probs=31.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i 272 (583)
.+|+|||||.+|+-+|..|++...+ ..++.+|+|+|+.+++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~--------~~~~~~V~vlEa~~~~ 46 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKE--------KNLPLELTLVEASPRV 46 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTT--------TTCSEEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccc--------cCCCCCEEEEECCCCC
Confidence 4899999999999999999986410 0023789999987654
No 428
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=88.74 E-value=0.24 Score=52.09 Aligned_cols=33 Identities=18% Similarity=0.329 Sum_probs=30.9
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
.+|.|||+|.-|+..|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999874
No 429
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=88.42 E-value=0.17 Score=47.69 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=31.5
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEE-EcCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQV-ISPRN 91 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtl-ie~~~ 91 (583)
+++.+|.|||+|.-|.+.|..|.+.|++|++ +++++
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 4457999999999999999999988999999 77763
No 430
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=88.38 E-value=0.3 Score=44.67 Aligned_cols=33 Identities=27% Similarity=0.527 Sum_probs=30.6
Q ss_pred CeEEEECC-cHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 59 KKVVVLGT-GWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 59 ~~VVIIGg-G~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
++|+|+|| |+.|..++..|.+.|++|++++|++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999998899999999874
No 431
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=88.30 E-value=0.46 Score=50.19 Aligned_cols=36 Identities=19% Similarity=0.201 Sum_probs=32.4
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+..++|.|||+|.-|...|..|+..|++|+++|+++
T Consensus 35 ~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 35 QPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 345789999999999999999999999999999874
No 432
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=88.28 E-value=0.27 Score=50.86 Aligned_cols=34 Identities=29% Similarity=0.379 Sum_probs=31.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..+|+|||+|.+|+.++..+...|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5799999999999999999988899999999874
No 433
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=88.20 E-value=0.35 Score=50.86 Aligned_cols=34 Identities=26% Similarity=0.567 Sum_probs=29.4
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCc--eEEEEecCCcc
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV--KITLLEAADHI 272 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~--~Vtlv~~~~~i 272 (583)
+|+|||||.+|+-+|..|++. +. +|+|+|+.+++
T Consensus 4 dVvVIGaGiaGLsaA~~L~~~--------------G~~~~V~vlEa~~~~ 39 (477)
T 3nks_A 4 TVVVLGGGISGLAASYHLSRA--------------PCPPKVVLVESSERL 39 (477)
T ss_dssp EEEEECCBHHHHHHHHHHHTS--------------SSCCEEEEECSSSSS
T ss_pred eEEEECCcHHHHHHHHHHHhC--------------CCCCcEEEEeCCCCC
Confidence 899999999999999999874 45 89999987654
No 434
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.15 E-value=0.31 Score=47.58 Aligned_cols=33 Identities=30% Similarity=0.311 Sum_probs=30.5
Q ss_pred eEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 60 KVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 60 ~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
+|.|||+|.-|...|..|.+.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 799999999999999999999999999998753
No 435
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=88.11 E-value=0.24 Score=52.27 Aligned_cols=34 Identities=12% Similarity=0.165 Sum_probs=31.5
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
+.++|+|||||-.|...+..|.+.|.+|+||+++
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3579999999999999999999999999999985
No 436
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=88.11 E-value=0.41 Score=49.54 Aligned_cols=35 Identities=31% Similarity=0.569 Sum_probs=30.7
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCC-ceEEEEecCCcc
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS-VKITLLEAADHI 272 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~-~~Vtlv~~~~~i 272 (583)
.+|+|||||.+|+-+|..|++. + .+|+++|+.+++
T Consensus 7 ~~v~IIGaG~aGl~aA~~L~~~--------------g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 7 SRIAIIGAGPAGLAAGMYLEQA--------------GFHDYTILERTDHV 42 (424)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--------------TCCCEEEECSSSCS
T ss_pred CCEEEECcCHHHHHHHHHHHhC--------------CCCcEEEEECCCCC
Confidence 4899999999999999999874 5 689999998775
No 437
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=88.10 E-value=0.35 Score=47.72 Aligned_cols=34 Identities=21% Similarity=0.202 Sum_probs=31.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999885
No 438
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.03 E-value=0.24 Score=47.59 Aligned_cols=34 Identities=15% Similarity=0.322 Sum_probs=31.0
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~ 91 (583)
.++|+|||+|-.|..+|..|.+.|. +|+|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4699999999999999999998897 899999874
No 439
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=87.95 E-value=0.34 Score=45.81 Aligned_cols=38 Identities=16% Similarity=0.298 Sum_probs=31.7
Q ss_pred CCCCCCeEEEECC-cHHHHHHHHhcCCCC-CeEEEEcCCC
Q 007975 54 MGIKKKKVVVLGT-GWAGTSFLKNLNNPS-YDVQVISPRN 91 (583)
Q Consensus 54 ~~~~~~~VVIIGg-G~aGl~aA~~L~~~g-~~Vtlie~~~ 91 (583)
..+++++|+|.|| |..|..++..|.+.| ++|++++|++
T Consensus 19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 3455789999995 999999999999999 8999999874
No 440
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=87.93 E-value=0.37 Score=50.23 Aligned_cols=35 Identities=20% Similarity=0.223 Sum_probs=30.7
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
....+|.|||.|.-|+..|..|++ |++|+++|+++
T Consensus 34 ~~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 34 SEFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred cCCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 345689999999999999999988 99999999874
No 441
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=87.91 E-value=0.37 Score=47.89 Aligned_cols=32 Identities=28% Similarity=0.334 Sum_probs=29.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
+.+|.|||+|.-|...|..|. .|++|++++|+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 368999999999999999999 99999999987
No 442
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=87.84 E-value=0.44 Score=48.77 Aligned_cols=33 Identities=30% Similarity=0.423 Sum_probs=29.5
Q ss_pred ceEEEEcCChhHHHHHHHHHH-hhhHhHhhhcCCCCCC-ceEEEEecCC
Q 007975 224 LHFVIVGGGPTGVEFAAELHD-FVDEDLFKLYPKVKDS-VKITLLEAAD 270 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~-~~~~~~~~~~p~~~~~-~~Vtlv~~~~ 270 (583)
.+|+|||||.+|+.+|..|++ . + .+|+|+++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~--------------G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNH--------------GITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHH--------------CCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhc--------------CCCcEEEEeCCC
Confidence 389999999999999999988 5 5 6999999876
No 443
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=87.77 E-value=0.5 Score=48.37 Aligned_cols=37 Identities=27% Similarity=0.384 Sum_probs=31.9
Q ss_pred ccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecC-Ccc
Q 007975 222 RILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA-DHI 272 (583)
Q Consensus 222 ~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~-~~i 272 (583)
+..+|+|||+|.+|+-+|..|.+. +.+|+|+|+. +++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~--------------G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRA--------------GHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHT--------------SCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHC--------------CCcEEEEecccccc
Confidence 456999999999999999999875 5799999998 654
No 444
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.73 E-value=0.34 Score=49.85 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=31.6
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
...+|+|+|+|.+|+.++..++..|.+|+++|+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35799999999999999999998899999999874
No 445
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=87.73 E-value=0.42 Score=50.21 Aligned_cols=37 Identities=11% Similarity=0.206 Sum_probs=33.2
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
...++|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 52 ~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 52 YDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4457999999999999999999999999999998853
No 446
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=87.70 E-value=0.35 Score=48.60 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=30.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~ 91 (583)
+.+|.|||+|..|...|..|+..|+ +|+|+|.++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3589999999999999999998888 999999874
No 447
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=87.69 E-value=0.43 Score=48.54 Aligned_cols=33 Identities=30% Similarity=0.485 Sum_probs=29.3
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCc
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADH 271 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~ 271 (583)
+|+|||||.+|+-+|..|++. +.+|+|+++.+.
T Consensus 5 dvvIIGaG~~Gl~~A~~La~~--------------G~~V~vie~~~~ 37 (389)
T 2gf3_A 5 DVIVVGAGSMGMAAGYQLAKQ--------------GVKTLLVDAFDP 37 (389)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSCS
T ss_pred CEEEECCCHHHHHHHHHHHhC--------------CCeEEEEeCCCC
Confidence 899999999999999999875 579999998753
No 448
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.58 E-value=0.31 Score=48.66 Aligned_cols=34 Identities=18% Similarity=0.387 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..+|.|||+|.-|-..|..++..|++|+|+|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999874
No 449
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=87.51 E-value=0.31 Score=51.52 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=32.1
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC-CC-eEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP-SY-DVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~-g~-~Vtlie~~~~ 92 (583)
..+|.|||+|+-|+..|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999988 99 9999998854
No 450
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=87.43 E-value=0.38 Score=48.14 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=30.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~ 91 (583)
+.+|.|||+|..|..+|..|+..|+ +|+|+|.++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4689999999999999999997787 999999774
No 451
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=87.41 E-value=0.43 Score=51.05 Aligned_cols=34 Identities=32% Similarity=0.516 Sum_probs=28.2
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCC-ceEEEEecCCc
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDS-VKITLLEAADH 271 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~-~~Vtlv~~~~~ 271 (583)
.+|+|||||.+|+-+|..|.+. + .+|+|+|+.++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~--------------G~~~V~VlEa~~r 43 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQN--------------GIQDCLVLEARDR 43 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHT--------------TCCSEEEECSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhc--------------CCCCEEEEeCCCC
Confidence 5899999999999999999875 4 57777776654
No 452
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=87.36 E-value=0.33 Score=51.47 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..+|.|||+|+-|+..|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999873
No 453
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=87.28 E-value=0.33 Score=48.45 Aligned_cols=34 Identities=21% Similarity=0.406 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~ 91 (583)
+.+|.|||+|..|...|..|...|+ +|+|+|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3689999999999999999998888 999999874
No 454
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=87.28 E-value=0.35 Score=49.28 Aligned_cols=33 Identities=33% Similarity=0.345 Sum_probs=30.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
.++|+|+|+|.+|..++..|+..|.+|+++|++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 479999999999999999999889999999987
No 455
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=87.25 E-value=0.36 Score=47.79 Aligned_cols=35 Identities=11% Similarity=0.051 Sum_probs=31.4
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
++++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34689999999999999999999999999999873
No 456
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=87.22 E-value=0.36 Score=46.19 Aligned_cols=37 Identities=24% Similarity=0.316 Sum_probs=31.8
Q ss_pred CCCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 55 GIKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 55 ~~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
....++|.|||+|.-|.+.|..|.+.|++|+++++++
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3456899999999999999999999999999999874
No 457
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=87.13 E-value=0.45 Score=44.32 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=30.0
Q ss_pred CCeEEEECC-cHHHHHHHHhcC-CCCCeEEEEcCC
Q 007975 58 KKKVVVLGT-GWAGTSFLKNLN-NPSYDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGg-G~aGl~aA~~L~-~~g~~Vtlie~~ 90 (583)
+++|+|.|| |..|..++..|. +.|++|++++|+
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecC
Confidence 467999995 999999999999 899999999987
No 458
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=87.10 E-value=0.95 Score=38.76 Aligned_cols=49 Identities=18% Similarity=0.417 Sum_probs=36.3
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCcccHHHHHHHHHHHHhCCCEEEeC
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNMFDKRITAFAEEKFSRDGIDVKLG 298 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~~~~~~~~~~~~~L~~~GV~v~~~ 298 (583)
++++|+|+|..|..+|..|... +.+|+++++.+ +. .+.+++.|++++.+
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~--------------g~~V~~id~~~--------~~----~~~~~~~~~~~~~g 55 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA--------------GKKVLAVDKSK--------EK----IELLEDEGFDAVIA 55 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--------------TCCEEEEESCH--------HH----HHHHHHTTCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--------------CCeEEEEECCH--------HH----HHHHHHCCCcEEEC
Confidence 4899999999999999999874 57999998753 11 13445567766543
No 459
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=87.09 E-value=0.32 Score=50.56 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=31.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..+|+|||.|..|..+|..|...|++|++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999874
No 460
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=87.09 E-value=0.36 Score=48.21 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=29.7
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCC--eEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~--~Vtlie~~~ 91 (583)
+.+|+|||+|..|.++|..|...++ +|+|+|.++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999987776 899999764
No 461
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=86.99 E-value=0.58 Score=47.24 Aligned_cols=31 Identities=23% Similarity=0.348 Sum_probs=28.1
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecC
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAA 269 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~ 269 (583)
.|+|||||.+|+-+|..|++. +.+|+|+++.
T Consensus 8 dVvVIG~Gi~Gls~A~~La~~--------------G~~V~vle~~ 38 (363)
T 1c0p_A 8 RVVVLGSGVIGLSSALILARK--------------GYSVHILARD 38 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhC--------------CCEEEEEecc
Confidence 899999999999999999874 6799999975
No 462
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=86.99 E-value=0.82 Score=40.08 Aligned_cols=38 Identities=16% Similarity=0.194 Sum_probs=31.4
Q ss_pred hccceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcc
Q 007975 221 KRILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHI 272 (583)
Q Consensus 221 ~~~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~i 272 (583)
....+|+|+|+|..|..+|..|... +.+|+++++.+..
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~--------------g~~V~vid~~~~~ 54 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS--------------GHSVVVVDKNEYA 54 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEEESCGGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC--------------CCeEEEEECCHHH
Confidence 4556999999999999999998764 5799999987643
No 463
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=86.99 E-value=0.42 Score=47.79 Aligned_cols=36 Identities=19% Similarity=0.304 Sum_probs=31.1
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~ 91 (583)
+.+.+|.|||+|..|.++|..|...++ +|+|+|.++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 345799999999999999999986676 999999874
No 464
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=86.96 E-value=0.55 Score=46.79 Aligned_cols=38 Identities=13% Similarity=0.247 Sum_probs=32.8
Q ss_pred CCCCCCeEEEECC-cHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 54 MGIKKKKVVVLGT-GWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 54 ~~~~~~~VVIIGg-G~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
.....++|+|.|| |+.|..++..|.+.|++|++++++.
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFA 54 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCS
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3444578999998 9999999999999999999999864
No 465
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=86.90 E-value=0.34 Score=45.35 Aligned_cols=34 Identities=29% Similarity=0.320 Sum_probs=29.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
.+.+|.|||+|..|...|..|.+.|++|++++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3468999999999999999999889999999976
No 466
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=86.86 E-value=0.22 Score=49.18 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=30.5
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+.+|.|||+|--|...|..|.+.|++|++++|+.
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 3589999999999999999998899999999874
No 467
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=86.84 E-value=0.4 Score=47.73 Aligned_cols=33 Identities=21% Similarity=0.464 Sum_probs=29.6
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPRN 91 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~~ 91 (583)
.+|+|||+|..|...|..|+..|+ +|+|+|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 689999999999999999987776 899999764
No 468
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=86.84 E-value=0.57 Score=49.54 Aligned_cols=37 Identities=38% Similarity=0.497 Sum_probs=31.4
Q ss_pred cceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc
Q 007975 223 ILHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (583)
Q Consensus 223 ~~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il 273 (583)
..+|+|||||.+|+-+|..|.+. +.+|+|+|+.+++.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~--------------g~~v~v~E~~~~~G 47 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKA--------------GYKVTVLEARTRPG 47 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--------------TCEEEEECSSSSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHC--------------CCCEEEEeccCCCC
Confidence 34899999999999999999874 57999999887653
No 469
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=86.82 E-value=0.48 Score=50.61 Aligned_cols=39 Identities=21% Similarity=0.186 Sum_probs=30.6
Q ss_pred CCEEEeCCeEEEEe--CCeEEEEEcCCCeeEEeecceEEEccCC
Q 007975 292 GIDVKLGSMVVKVT--DKEIFTKVRGNGETSSMPYGMVVWSTGI 333 (583)
Q Consensus 292 GV~v~~~~~V~~v~--~~~v~~~~~~~G~~~~i~~D~vI~a~G~ 333 (583)
|++|+++++|++|+ ++++++.. .+|+. +.+|.||+|++.
T Consensus 226 g~~i~~~~~V~~i~~~~~~v~v~~-~~g~~--~~ad~VI~a~p~ 266 (520)
T 1s3e_A 226 GDRVKLERPVIYIDQTRENVLVET-LNHEM--YEAKYVISAIPP 266 (520)
T ss_dssp GGGEESSCCEEEEECSSSSEEEEE-TTSCE--EEESEEEECSCG
T ss_pred CCcEEcCCeeEEEEECCCeEEEEE-CCCeE--EEeCEEEECCCH
Confidence 67899999999996 35566554 45764 899999999983
No 470
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=86.56 E-value=0.34 Score=47.81 Aligned_cols=34 Identities=24% Similarity=0.411 Sum_probs=31.4
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 5799999999999999999999999999999873
No 471
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=86.50 E-value=0.4 Score=47.59 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=29.8
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCC--eEEEEcCCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPRN 91 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~--~Vtlie~~~ 91 (583)
.+|+|||+|..|.+.|..|+..|+ +|+|+|.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999998888 999999873
No 472
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=86.41 E-value=0.55 Score=46.41 Aligned_cols=34 Identities=15% Similarity=0.307 Sum_probs=31.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC-eEEEEcCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSY-DVQVISPR 90 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~-~Vtlie~~ 90 (583)
..++|+|||+|-+|.++|..|...|+ +|+|++|+
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 35789999999999999999999998 89999987
No 473
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=86.32 E-value=0.45 Score=46.29 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=30.9
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
..++|+|+|+|-.|.++|..|...|.+|++++|+
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3578999999999999999999889999999977
No 474
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=86.31 E-value=0.58 Score=46.99 Aligned_cols=38 Identities=21% Similarity=0.347 Sum_probs=29.1
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCC
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAAD 270 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~ 270 (583)
.|+|||||.+|+-+|..|++.... ..++.+|+|+++.+
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~--------~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHS--------VLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTT--------TSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccc--------cCCCceEEEEECCC
Confidence 799999999999999999886300 00126999999874
No 475
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=86.29 E-value=0.47 Score=47.12 Aligned_cols=34 Identities=29% Similarity=0.380 Sum_probs=30.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+.+|.|||+|.-|...|..|.+.|++|+++|+++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999998899999999763
No 476
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=86.24 E-value=0.41 Score=47.85 Aligned_cols=35 Identities=29% Similarity=0.455 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
.+++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 35699999999999999999999999999999873
No 477
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=86.23 E-value=0.58 Score=48.84 Aligned_cols=59 Identities=20% Similarity=0.307 Sum_probs=42.4
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccCc-----------------ccHHHHHHHHH
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILNM-----------------FDKRITAFAEE 286 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~~-----------------~~~~~~~~~~~ 286 (583)
.+|+|||||.+|+-+|..|.+. +.+|+|+|+.+++... +... ...+.+
T Consensus 6 ~~v~iiG~G~~Gl~aA~~l~~~--------------g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~-~~~~~~ 70 (453)
T 2yg5_A 6 RDVAIVGAGPSGLAAATALRKA--------------GLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPD-QTALIS 70 (453)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTT-CHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHC--------------CCcEEEEECCCCCCCceeccccCCceeccCCeEecCc-cHHHHH
Confidence 4899999999999999999875 5789999987765321 1111 244567
Q ss_pred HHHhCCCEEEe
Q 007975 287 KFSRDGIDVKL 297 (583)
Q Consensus 287 ~L~~~GV~v~~ 297 (583)
.+++.|++...
T Consensus 71 ~~~~~g~~~~~ 81 (453)
T 2yg5_A 71 LLDELGLKTFE 81 (453)
T ss_dssp HHHHTTCCEEE
T ss_pred HHHHcCCcccc
Confidence 77888887644
No 478
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=86.16 E-value=0.58 Score=48.40 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=29.0
Q ss_pred eEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 60 KVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 60 ~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+|.|||+|..|+..|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 79999999999999999998 99999999874
No 479
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=86.14 E-value=0.43 Score=47.92 Aligned_cols=34 Identities=29% Similarity=0.401 Sum_probs=31.0
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
+.++|.|||+|.-|...|..|.+.|++|++++++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4579999999999999999999999999999986
No 480
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=86.13 E-value=0.48 Score=46.04 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=31.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
.++|+|||+|-+|-+++..|...|.+|+|++|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6899999999999999999998889999999874
No 481
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.12 E-value=0.54 Score=45.99 Aligned_cols=33 Identities=21% Similarity=0.422 Sum_probs=30.5
Q ss_pred CCeEEEECC-cHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 58 KKKVVVLGT-GWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 58 ~~~VVIIGg-G~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
+.+|.|||+ |.-|...|..|.+.|++|+++|++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 468999999 999999999999889999999976
No 482
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=85.98 E-value=0.38 Score=48.23 Aligned_cols=38 Identities=18% Similarity=0.256 Sum_probs=30.6
Q ss_pred CCCCCeEEEECC-cHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 55 GIKKKKVVVLGT-GWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 55 ~~~~~~VVIIGg-G~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
..++++|+|.|| |+.|..++..|.+.|++|+++++.+.
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 345678999998 99999999999989999999998753
No 483
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=85.97 E-value=0.28 Score=48.62 Aligned_cols=32 Identities=25% Similarity=0.282 Sum_probs=28.9
Q ss_pred CCeEEEECCcHHHHHHHHhcCCC-----C-CeEEEEcC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNP-----S-YDVQVISP 89 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~-----g-~~Vtlie~ 89 (583)
+.+|.|||+|.-|...|..|.+. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35899999999999999999877 8 99999986
No 484
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=85.82 E-value=0.6 Score=49.00 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=32.8
Q ss_pred ceEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCcccC
Q 007975 224 LHFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHILN 274 (583)
Q Consensus 224 ~~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il~ 274 (583)
.+|+|||+|.+|+-+|..|++. +.+|+++|+.+++..
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~--------------G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVD--------------GKKVLHIDKQDHYGG 48 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--------------TCCEEEECSSSSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHC--------------CCeEEEEeCCCCCCc
Confidence 4899999999999999999875 689999999988754
No 485
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.70 E-value=0.48 Score=43.81 Aligned_cols=32 Identities=28% Similarity=0.496 Sum_probs=29.5
Q ss_pred eEEEECC-cHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 60 KVVVLGT-GWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 60 ~VVIIGg-G~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+|+|.|| |+.|..++..|.+.|++|++++|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 9999999999998999999999873
No 486
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=85.69 E-value=0.47 Score=48.43 Aligned_cols=34 Identities=26% Similarity=0.290 Sum_probs=31.2
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
..++|+|+|+|..|..+|..|+..|++|+++|++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 3579999999999999999999999999999976
No 487
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=85.63 E-value=0.59 Score=43.28 Aligned_cols=31 Identities=32% Similarity=0.413 Sum_probs=29.2
Q ss_pred eEEEEC-CcHHHHHHHHhcCCCCCeEEEEcCC
Q 007975 60 KVVVLG-TGWAGTSFLKNLNNPSYDVQVISPR 90 (583)
Q Consensus 60 ~VVIIG-gG~aGl~aA~~L~~~g~~Vtlie~~ 90 (583)
+|.||| +|..|...|..|.+.|++|++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 799999 9999999999999999999999986
No 488
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=85.60 E-value=0.46 Score=46.53 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=30.7
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999999999999999999999999999874
No 489
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=85.58 E-value=0.76 Score=45.30 Aligned_cols=34 Identities=24% Similarity=0.525 Sum_probs=31.3
Q ss_pred CCeEEEEC-CcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 58 KKKVVVLG-TGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 58 ~~~VVIIG-gG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+++|.||| +|.-|.+.|..|.+.|++|+++++++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 46899999 99999999999999999999999874
No 490
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=85.56 E-value=0.45 Score=47.67 Aligned_cols=34 Identities=29% Similarity=0.520 Sum_probs=29.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCC--eEEEEcCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSY--DVQVISPR 90 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~--~Vtlie~~ 90 (583)
...+|.|||+|..|.++|..|...++ +|+|+|.+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 35689999999999999999987676 89999975
No 491
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=85.54 E-value=0.72 Score=47.27 Aligned_cols=35 Identities=26% Similarity=0.503 Sum_probs=30.5
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCceEEEEecCCccc
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSVKITLLEAADHIL 273 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~~Vtlv~~~~~il 273 (583)
+|+|||+|.+|+-+|..|.+. +.+|+++|+.+++.
T Consensus 5 ~v~iiG~G~~Gl~~A~~l~~~--------------g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 5 KILIVGAGFSGAVIGRQLAEK--------------GHQVHIIDQRDHIG 39 (384)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--------------TCEEEEEESSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--------------CCcEEEEEecCCcC
Confidence 899999999999999998764 57999999987664
No 492
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=85.54 E-value=0.49 Score=48.11 Aligned_cols=36 Identities=14% Similarity=0.302 Sum_probs=31.6
Q ss_pred CCCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 56 IKKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 56 ~~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
+++++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 345799999999999999999999999999999873
No 493
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=85.45 E-value=0.5 Score=46.57 Aligned_cols=36 Identities=19% Similarity=0.401 Sum_probs=32.1
Q ss_pred CCCeEEEECC-cHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 57 KKKKVVVLGT-GWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 57 ~~~~VVIIGg-G~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
++++|+|.|| |+.|-.++..|.+.|++|+++++...
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 4679999999 99999999999988999999998754
No 494
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=85.38 E-value=0.62 Score=45.91 Aligned_cols=34 Identities=21% Similarity=0.335 Sum_probs=30.7
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
..++|.|||+|.-|-..|..|+ .|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4589999999999999999999 999999999874
No 495
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=85.34 E-value=0.49 Score=49.59 Aligned_cols=35 Identities=14% Similarity=0.270 Sum_probs=32.3
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNY 92 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~ 92 (583)
..+|.|||.|+-|+..|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998854
No 496
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=85.33 E-value=0.65 Score=46.02 Aligned_cols=35 Identities=23% Similarity=0.205 Sum_probs=31.8
Q ss_pred CCCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 57 KKKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 57 ~~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
++++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999873
No 497
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=85.25 E-value=0.31 Score=47.83 Aligned_cols=33 Identities=27% Similarity=0.365 Sum_probs=30.7
Q ss_pred CeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCC
Q 007975 59 KKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRN 91 (583)
Q Consensus 59 ~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~ 91 (583)
++|.|||.|.-|...|..|.+.|++|+++|+++
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 589999999999999999998999999999874
No 498
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=85.22 E-value=0.57 Score=48.07 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=33.6
Q ss_pred CCeEEEECCcHHHHHHHHhcCCCCCeEEEEcCCCCCC
Q 007975 58 KKKVVVLGTGWAGTSFLKNLNNPSYDVQVISPRNYFA 94 (583)
Q Consensus 58 ~~~VVIIGgG~aGl~aA~~L~~~g~~Vtlie~~~~~~ 94 (583)
.++++|+|||.-+.++|..+...|++|+|+|+++.+.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~ 240 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFA 240 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhc
Confidence 5799999999999999999999999999999987643
No 499
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=85.19 E-value=0.71 Score=47.96 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=29.9
Q ss_pred eEEEEcCChhHHHHHHHHHHhhhHhHhhhcCCCCCCc-eEEEEecCCcc
Q 007975 225 HFVIVGGGPTGVEFAAELHDFVDEDLFKLYPKVKDSV-KITLLEAADHI 272 (583)
Q Consensus 225 ~vvVVGgG~tgvE~A~~l~~~~~~~~~~~~p~~~~~~-~Vtlv~~~~~i 272 (583)
.|+|||||.+|+-+|..|++. +. +|+|+++.+..
T Consensus 8 dVvIIGgG~aGlsaA~~La~~--------------G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 8 SLLIVGAGTWGTSTALHLARR--------------GYTNVTVLDPYPVP 42 (438)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--------------TCCCEEEEESSCSS
T ss_pred CEEEECCCHHHHHHHHHHHHc--------------CCCcEEEEeCCCCC
Confidence 899999999999999999885 56 89999987653
No 500
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=85.13 E-value=0.69 Score=44.86 Aligned_cols=30 Identities=27% Similarity=0.555 Sum_probs=28.8
Q ss_pred eEEEECC-cHHHHHHHHhcCCCCCeEEEEcC
Q 007975 60 KVVVLGT-GWAGTSFLKNLNNPSYDVQVISP 89 (583)
Q Consensus 60 ~VVIIGg-G~aGl~aA~~L~~~g~~Vtlie~ 89 (583)
+|+|.|| |+.|-.++..|.+.|++|+++++
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecc
Confidence 8999997 99999999999999999999998
Done!