Query 007976
Match_columns 582
No_of_seqs 270 out of 1529
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 15:07:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007976.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007976hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u6z_A Exopolyphosphatase; alp 100.0 2E-103 6E-108 866.6 56.3 499 11-567 9-511 (513)
2 3hi0_A Putative exopolyphospha 100.0 4E-100 1E-104 838.4 45.1 487 12-561 14-507 (508)
3 3mdq_A Exopolyphosphatase; str 100.0 1.8E-68 6.3E-73 554.0 37.9 303 13-332 4-311 (315)
4 3cer_A Possible exopolyphospha 100.0 3.2E-66 1.1E-70 542.4 32.1 310 6-331 9-339 (343)
5 1t6c_A Exopolyphosphatase; alp 100.0 8.3E-65 2.9E-69 526.0 34.6 296 13-331 12-311 (315)
6 3rf0_A Exopolyphosphatase; str 100.0 2.2E-39 7.7E-44 316.5 18.3 198 340-570 3-204 (209)
7 3aap_A Ectonucleoside triphosp 100.0 4.5E-29 1.6E-33 261.7 13.6 154 13-177 3-178 (353)
8 3cj1_A Ectonucleoside triphosp 99.9 3.1E-24 1E-28 231.6 14.2 159 13-174 34-224 (456)
9 3zx3_A Ectonucleoside triphosp 99.8 1.5E-19 5.1E-24 193.7 15.3 148 14-164 34-202 (452)
10 3h1q_A Ethanolamine utilizatio 99.7 6.1E-17 2.1E-21 163.4 16.0 153 11-183 26-179 (272)
11 2ych_A Competence protein PILM 98.3 1.7E-05 5.7E-10 83.2 16.6 71 112-183 161-231 (377)
12 4a2a_A Cell division protein F 98.2 3.1E-05 1.1E-09 82.8 17.3 39 144-182 207-245 (419)
13 4a57_A Nucleoside-triphosphata 98.2 7.1E-06 2.4E-10 88.0 10.9 74 88-161 158-265 (611)
14 2pq7_A Predicted HD superfamil 97.5 0.00046 1.6E-08 66.9 10.4 99 359-496 34-136 (220)
15 4gni_A Putative heat shock pro 97.2 0.004 1.4E-07 65.7 14.1 75 106-182 168-249 (409)
16 3tm8_A BD1817, uncharacterized 97.0 0.0027 9.3E-08 65.4 10.4 102 361-496 169-289 (328)
17 2o08_A BH1327 protein; putativ 96.9 0.0024 8.3E-08 60.2 8.4 93 361-499 21-135 (188)
18 3ccg_A HD superfamily hydrolas 96.9 0.0026 8.8E-08 60.1 8.4 93 361-499 22-137 (190)
19 2ogi_A Hypothetical protein SA 96.6 0.0036 1.2E-07 59.5 7.5 94 360-499 28-143 (196)
20 3b57_A LIN1889 protein; Q92AN1 96.6 0.0076 2.6E-07 57.8 9.8 77 360-461 27-103 (209)
21 1k8k_A ARP3, actin-like protei 96.6 0.012 4E-07 62.4 12.0 99 82-182 101-204 (418)
22 2d0o_A DIOL dehydratase-reacti 96.6 0.0072 2.5E-07 65.3 10.1 77 103-182 370-446 (610)
23 2qgs_A Protein Se1688; alpha-h 96.6 0.012 4.1E-07 57.1 10.8 75 360-462 27-104 (225)
24 1nbw_A Glycerol dehydratase re 96.5 0.0078 2.7E-07 65.2 9.9 76 104-182 373-448 (607)
25 2fxu_A Alpha-actin-1, actin, a 96.5 0.019 6.6E-07 59.9 12.5 93 81-182 93-189 (375)
26 3qfu_A 78 kDa glucose-regulate 96.4 0.046 1.6E-06 56.9 14.9 109 70-182 136-250 (394)
27 3dto_A BH2835 protein; all alp 96.4 0.012 4E-07 57.2 9.5 75 359-461 26-103 (223)
28 2pjq_A Uncharacterized protein 96.2 0.0058 2E-07 59.7 6.4 75 359-461 31-108 (231)
29 3djb_A Hydrolase, HD family; a 95.9 0.014 4.7E-07 56.7 7.1 78 359-461 26-103 (223)
30 2v7y_A Chaperone protein DNAK; 95.8 0.15 5.3E-06 55.3 15.9 107 70-182 92-205 (509)
31 1yuw_A Heat shock cognate 71 k 95.7 0.13 4.5E-06 56.5 15.3 107 70-181 122-236 (554)
32 1jce_A ROD shape-determining p 95.7 0.1 3.5E-06 53.3 13.2 76 103-183 111-187 (344)
33 2zgy_A Plasmid segregation pro 95.3 0.35 1.2E-05 48.9 15.6 96 83-182 90-206 (320)
34 2qm1_A Glucokinase; alpha-beta 95.0 0.38 1.3E-05 48.5 15.0 140 4-167 2-158 (326)
35 2fsj_A Hypothetical protein TA 94.7 0.046 1.6E-06 56.5 6.9 62 117-181 165-232 (346)
36 3gw7_A Uncharacterized protein 94.4 0.013 4.6E-07 57.4 1.9 76 361-461 28-110 (239)
37 3qb0_A Actin-related protein 4 94.3 0.2 6.9E-06 54.2 11.3 151 15-182 25-203 (498)
38 1hux_A Activator of (R)-2-hydr 94.1 0.46 1.6E-05 47.1 12.6 115 14-166 4-119 (270)
39 4apw_A ALP12; actin-like prote 93.9 0.056 1.9E-06 55.4 5.6 42 142-183 171-214 (329)
40 2q14_A Phosphohydrolase; BT420 93.8 0.088 3E-06 55.6 7.0 59 361-429 58-126 (410)
41 3i33_A Heat shock-related 70 k 93.6 0.38 1.3E-05 50.2 11.5 110 70-182 141-258 (404)
42 3hc1_A Uncharacterized HDOD do 93.3 0.12 4.3E-06 52.1 6.8 95 361-499 121-245 (305)
43 1zc6_A Probable N-acetylglucos 93.0 1.5 5.1E-05 43.8 14.5 130 12-166 10-145 (305)
44 3js6_A Uncharacterized PARM pr 92.5 0.11 3.8E-06 53.8 5.2 64 117-182 156-225 (355)
45 3u1n_A SAM domain and HD domai 92.3 0.26 8.8E-06 53.3 7.8 46 361-414 68-113 (528)
46 3irh_A HD domain protein; phos 92.0 0.18 6.3E-06 53.8 6.3 67 361-430 89-163 (480)
47 2ews_A Pantothenate kinase; PA 91.8 4.5 0.00016 40.3 15.9 128 11-182 18-148 (287)
48 3sk9_A Putative uncharacterize 91.7 0.21 7.3E-06 49.5 6.0 89 361-465 28-149 (265)
49 1dkg_D Molecular chaperone DNA 91.7 0.92 3.1E-05 46.8 11.2 76 104-182 152-236 (383)
50 4ehu_A Activator of 2-hydroxyi 91.6 2.7 9.2E-05 41.2 14.1 113 14-165 2-116 (276)
51 4b9q_A Chaperone protein DNAK; 91.4 1.1 3.9E-05 49.6 12.2 109 69-182 117-236 (605)
52 2hek_A Hypothetical protein; p 91.2 0.37 1.3E-05 50.1 7.4 75 361-458 53-141 (371)
53 1k8k_B ARP2, actin-like protei 90.9 0.13 4.3E-06 54.1 3.6 92 83-182 99-193 (394)
54 3zyy_X Iron-sulfur cluster bin 90.9 1.1 3.8E-05 49.6 11.3 161 13-176 205-402 (631)
55 3d2f_A Heat shock protein homo 90.8 1.9 6.6E-05 48.4 13.4 111 68-182 119-241 (675)
56 2ch5_A NAGK protein; transfera 90.7 2.5 8.5E-05 42.8 13.2 140 14-176 7-152 (347)
57 4fo0_A Actin-related protein 8 89.3 3 0.0001 45.8 13.3 110 65-182 170-287 (593)
58 2kho_A Heat shock protein 70; 88.7 2.1 7.1E-05 47.5 11.3 109 69-182 117-236 (605)
59 3dwl_A Actin-related protein 3 88.2 1.7 5.9E-05 46.0 9.9 100 81-183 116-221 (427)
60 2hoe_A N-acetylglucosamine kin 88.0 8.9 0.0003 39.5 15.1 134 13-167 87-236 (380)
61 2dqb_A Deoxyguanosinetriphosph 87.9 1.1 3.9E-05 46.5 8.0 52 361-430 78-145 (376)
62 1vqr_A Hypothetical protein CJ 85.9 1.2 4.3E-05 44.4 6.9 38 361-415 127-164 (297)
63 3r8e_A Hypothetical sugar kina 85.5 4.8 0.00017 40.4 11.2 134 13-167 19-168 (321)
64 4e1j_A Glycerol kinase; struct 84.8 3.4 0.00012 44.8 10.2 82 7-97 20-104 (520)
65 3i7a_A Putative metal-dependen 84.7 2.4 8.1E-05 42.0 8.3 98 361-497 120-238 (281)
66 3vgl_A Glucokinase; ROK family 84.6 6.7 0.00023 39.3 11.8 130 14-167 3-146 (321)
67 2ivn_A O-sialoglycoprotein end 84.0 38 0.0013 34.1 17.6 148 15-180 3-159 (330)
68 1z05_A Transcriptional regulat 83.6 19 0.00064 37.6 15.2 135 13-167 108-258 (429)
69 3ezw_A Glycerol kinase; glycer 83.6 2.9 9.8E-05 45.4 9.0 78 12-98 3-83 (526)
70 1z6r_A MLC protein; transcript 82.9 14 0.00048 38.2 13.7 135 13-167 85-236 (406)
71 1zbs_A Hypothetical protein PG 81.2 19 0.00066 35.3 13.4 128 15-166 2-132 (291)
72 1saz_A Probable butyrate kinas 80.0 5.3 0.00018 41.4 9.1 142 14-168 3-200 (381)
73 4am6_A Actin-like protein ARP8 80.0 6.9 0.00024 43.4 10.2 112 64-182 191-311 (655)
74 4db3_A Glcnac kinase, N-acetyl 79.8 19 0.00063 36.2 12.9 133 14-167 25-170 (327)
75 3ifr_A Carbohydrate kinase, FG 78.7 5.2 0.00018 43.1 8.8 76 13-97 7-85 (508)
76 2pgs_A Putative deoxyguanosine 78.7 2.2 7.7E-05 45.4 5.7 47 361-414 65-114 (451)
77 4bc3_A Xylulose kinase; transf 77.6 5.3 0.00018 43.4 8.5 77 13-96 10-98 (538)
78 3g25_A Glycerol kinase; IDP007 77.1 7.7 0.00026 41.7 9.6 74 13-95 6-82 (501)
79 2yhw_A Bifunctional UDP-N-acet 76.6 30 0.001 34.7 13.4 134 13-167 30-181 (343)
80 2ap1_A Putative regulator prot 76.3 36 0.0012 33.7 13.9 133 13-167 24-170 (327)
81 3epq_A Putative fructokinase; 74.2 36 0.0012 33.7 13.1 126 13-167 3-147 (302)
82 3m1t_A Putative phosphohydrola 74.1 6.2 0.00021 38.8 7.2 38 361-416 108-145 (275)
83 3hz6_A Xylulokinase; xylulose, 73.5 9.1 0.00031 41.2 9.0 74 13-96 5-81 (511)
84 2e2o_A Hexokinase; acetate and 73.5 19 0.00066 35.3 10.8 114 14-154 3-118 (299)
85 3bg2_A DGTP triphosphohydrolas 73.3 2.3 8E-05 45.1 4.0 51 361-413 67-120 (444)
86 3ljx_A MMOQ response regulator 73.1 9 0.00031 37.9 8.2 38 361-415 111-148 (288)
87 2p3r_A Glycerol kinase; glycer 72.8 11 0.00037 40.6 9.3 75 13-96 3-80 (510)
88 3h3n_X Glycerol kinase; ATP-bi 72.3 7.6 0.00026 41.8 8.0 76 12-96 4-82 (506)
89 2aa4_A Mannac kinase, putative 71.8 22 0.00075 34.6 10.7 130 15-167 3-145 (289)
90 2zf5_O Glycerol kinase; hypert 71.3 11 0.00038 40.3 9.0 76 13-97 3-81 (497)
91 3htv_A D-allose kinase, alloki 70.4 22 0.00074 35.4 10.4 133 13-167 7-156 (310)
92 3vov_A Glucokinase, hexokinase 69.9 60 0.0021 31.9 13.6 132 14-167 2-148 (302)
93 3l0q_A Xylulose kinase; xlylul 69.3 11 0.00036 41.2 8.4 74 13-96 5-82 (554)
94 1woq_A Inorganic polyphosphate 69.3 82 0.0028 30.2 14.8 136 14-167 13-165 (267)
95 3mem_A Putative signal transdu 69.0 18 0.00061 38.4 9.8 43 361-417 281-323 (457)
96 2gup_A ROK family protein; sug 68.0 43 0.0015 32.5 11.9 124 15-167 6-142 (292)
97 3ll3_A Gluconate kinase; xylul 66.3 12 0.00041 40.2 7.9 72 13-96 4-78 (504)
98 3m5f_A Metal dependent phospho 65.0 7.7 0.00026 37.6 5.4 58 398-462 55-127 (244)
99 2dpn_A Glycerol kinase; thermu 64.8 14 0.00047 39.6 8.0 74 14-96 3-79 (495)
100 3jvp_A Ribulokinase; PSI-II, N 64.5 8.5 0.00029 42.1 6.4 78 13-96 5-94 (572)
101 2d4w_A Glycerol kinase; alpha 63.2 25 0.00084 37.7 9.7 76 14-98 3-81 (504)
102 3djc_A Type III pantothenate k 61.9 33 0.0011 33.6 9.5 129 15-166 4-148 (266)
103 3h6e_A Carbohydrate kinase, FG 60.2 12 0.00041 40.1 6.4 24 13-38 6-29 (482)
104 1zxo_A Conserved hypothetical 58.3 42 0.0014 32.8 9.7 126 15-166 2-130 (291)
105 2w40_A Glycerol kinase, putati 58.1 25 0.00085 37.6 8.5 75 13-96 4-83 (503)
106 3kq5_A Hypothetical cytosolic 55.7 8.6 0.00029 39.8 4.1 41 361-415 78-119 (393)
107 2ibn_A Inositol oxygenase; red 54.5 4.7 0.00016 38.9 1.8 25 400-424 79-103 (250)
108 3mcp_A Glucokinase; structural 52.4 63 0.0021 33.1 10.1 133 13-167 9-171 (366)
109 4htl_A Beta-glucoside kinase; 49.6 1.6E+02 0.0056 28.5 12.5 127 14-167 5-147 (297)
110 3aql_A Poly(A) polymerase; tra 48.9 12 0.00042 39.2 4.1 55 400-460 287-352 (415)
111 1vhx_A Putative holliday junct 48.8 14 0.00049 32.9 4.0 86 14-122 4-97 (150)
112 2cqz_A 177AA long hypothetical 47.6 19 0.00066 32.9 4.8 42 361-415 35-76 (177)
113 2h3g_X Biosynthetic protein; p 45.8 83 0.0028 30.6 9.4 129 15-166 2-146 (268)
114 3i8b_A Xylulose kinase; strain 45.6 49 0.0017 35.5 8.3 26 12-38 4-29 (515)
115 3mdq_A Exopolyphosphatase; str 41.8 68 0.0023 32.0 8.2 59 13-74 131-190 (315)
116 1nu0_A Hypothetical protein YQ 38.3 1.2E+02 0.0041 26.4 8.2 86 14-123 4-96 (138)
117 3cet_A Conserved archaeal prot 34.5 31 0.001 35.0 4.2 130 15-167 2-151 (334)
118 3djc_A Type III pantothenate k 34.3 43 0.0015 32.7 5.2 30 145-174 4-33 (266)
119 2uyt_A Rhamnulokinase; rhamnos 33.5 29 0.00098 36.9 4.0 23 11-33 2-24 (489)
120 2e5n_A RNA polymerase II elong 30.4 67 0.0023 26.6 4.8 47 394-443 41-89 (100)
121 1miw_A TRNA CCA-adding enzyme; 30.3 42 0.0014 34.9 4.6 43 400-460 248-290 (404)
122 1t6c_A Exopolyphosphatase; alp 29.6 61 0.0021 32.4 5.5 58 12-74 137-197 (315)
123 2itm_A Xylulose kinase, xylulo 29.1 1.2E+02 0.0041 31.9 8.1 71 15-96 2-75 (484)
124 1vfg_A A-adding enzyme, poly A 28.8 52 0.0018 34.0 5.0 43 399-459 256-298 (390)
125 1u6z_A Exopolyphosphatase; alp 28.5 54 0.0019 35.2 5.2 57 14-73 138-195 (513)
126 3uhj_A Probable glycerol dehyd 28.5 17 0.00058 37.7 1.1 108 16-155 9-118 (387)
127 1zkl_A HCP1, TM22, high-affini 28.4 48 0.0016 33.9 4.5 42 361-413 86-127 (353)
128 2paq_A 5'-deoxynucleotidase YF 27.9 60 0.002 30.3 4.8 46 361-419 34-80 (201)
129 2doa_A RNA polymerase II elong 27.7 36 0.0012 28.4 2.7 47 394-443 40-88 (104)
130 1nbw_A Glycerol dehydratase re 26.0 79 0.0027 34.4 5.7 57 13-77 2-58 (607)
131 1sz2_A Glucokinase, glucose ki 25.3 2.6E+02 0.009 27.5 9.5 120 11-153 12-149 (332)
132 1bdg_A Hexokinase; phosphotran 24.3 1.4E+02 0.0048 31.4 7.3 60 13-77 68-128 (451)
133 3sk3_A Acetate kinase, acetoki 23.6 53 0.0018 34.3 3.8 31 3-33 9-39 (415)
134 1taz_A Calcium/calmodulin-depe 23.2 76 0.0026 32.5 4.9 42 361-413 85-126 (365)
135 2w6k_A COBE; biosynthetic prot 22.9 1.4E+02 0.0047 26.3 5.9 59 60-127 22-80 (145)
136 3o8m_A Hexokinase; rnaseh-like 22.8 3E+02 0.01 29.2 9.6 60 14-78 81-140 (485)
137 3cer_A Possible exopolyphospha 22.5 1.1E+02 0.0038 30.9 6.0 62 13-74 146-211 (343)
138 2our_A CAMP and CAMP-inhibited 22.5 66 0.0022 32.5 4.2 40 361-413 83-122 (331)
139 1f0j_A PDE4B, phosphodiesteras 21.9 1.8E+02 0.0062 29.8 7.4 42 361-413 86-127 (377)
140 4dzo_A Mitotic spindle assembl 21.8 71 0.0024 27.4 3.6 44 104-153 32-75 (123)
141 3ce9_A Glycerol dehydrogenase; 20.8 21 0.00071 36.3 -0.0 74 77-155 27-100 (354)
142 2h3g_X Biosynthetic protein; p 20.5 1.1E+02 0.0037 29.8 5.2 28 145-172 2-29 (268)
143 3eeq_A Putative cobalamin bios 20.0 1.4E+02 0.0049 30.1 6.1 56 60-129 220-275 (336)
No 1
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=100.00 E-value=1.8e-103 Score=866.63 Aligned_cols=499 Identities=24% Similarity=0.373 Sum_probs=444.6
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEE
Q 007976 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (582)
Q Consensus 11 ~~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (582)
+++++|+|||||||+||+|+++. ++.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|++|+|+ +|+
T Consensus 9 ~~~~~AaIDiGSNSirL~I~~~~-~~~~~~l~~~k~~vrLg~g~~~~g~Ls~eai~r~~~~L~~f~~~~~~~~v~--~v~ 85 (513)
T 1u6z_A 9 RPQEFAAVDLGSNSFHMVIARVV-DGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPA--SVC 85 (513)
T ss_dssp ---CEEEEEECSSCEEEEEEEEE-TTEEEEEEEEEECCCTGGGBCTTCCBCHHHHHHHHHHHHHHHHHTTTCCGG--GEE
T ss_pred cCCeEEEEEeccccEEEEEEEEc-CCeeEEEEeeEEEEeccCcccccCCcCHHHHHHHHHHHHHHHHHHHhCCCC--EEE
Confidence 45579999999999999999997 578999999999999999999999999999999999999999999999994 799
Q ss_pred EEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEE
Q 007976 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCES 170 (582)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~S 170 (582)
+|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+ +++++||||||||+++++++++..++|
T Consensus 86 ~vATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~-~~lviDIGGGStEl~~~~~~~~~~~~S 164 (513)
T 1u6z_A 86 IVGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKG-RKLVIDIGGGSTELVIGENFEPILVES 164 (513)
T ss_dssp EEECHHHHHCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCCCS-CEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred EEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccCCC-CEEEEEECCCcEEEEEEeCCeeeEEEE
Confidence 9999999999999999999999999999999999999999999999987433 689999999999999999999999999
Q ss_pred EechHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHhhcchhHHHHhcCCcEEEeecHHHHHHHHHHHc-CCCcccccCCCC
Q 007976 171 VNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS-GYDRDFVDNVGD 248 (582)
Q Consensus 171 lplG~vrl~e~f~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~r~la~~~~~-~y~~~~~~~~~~ 248 (582)
+|+|+|+++++|+.++ ++..++.++++|+++.+.... ..++..++..+||+|||+|+++++... .|+.
T Consensus 165 l~lG~vrlte~f~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~~~~~~~lvg~gGt~~~la~i~~~~~~~~-------- 234 (513)
T 1u6z_A 165 RRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLT--WQFRIQGWNVAMGASGTIKAAHEVLMEMGEKD-------- 234 (513)
T ss_dssp ESCCHHHHHHHHSGGGBCCHHHHHHHHHHHHHHHTTTH--HHHHHHCCSEEEEESHHHHHHHHHHHHTTCSS--------
T ss_pred EeccHHHHHHHHcccCCCCHHHHHHHHHHHHHHHHHHH--HHhhhcCCCEEEEEChHHHHHHHHHHhCCCCC--------
Confidence 9999999999998864 688888899999999997642 233444666799999999999998643 4431
Q ss_pred CCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHH
Q 007976 249 FGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (582)
Q Consensus 249 ~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~gLReGll~~~ 328 (582)
+ .++.+++.++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||+.|||||+++++
T Consensus 235 ------~-~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreGll~~~ 305 (513)
T 1u6z_A 235 ------G-IITPERLEKLVKEVLRHRNF--ASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEM 305 (513)
T ss_dssp ------S-CBCHHHHHHHHHHHTTCSBG--GGCCCTTCCTTGGGTHHHHHHHHHHHHHHHTCSCBEECSCCHHHHHHHHH
T ss_pred ------C-eecHHHHHHHHHHHHCCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCCCEEEECCCcHHHHHHHHH
Confidence 1 59999999999999999998 99999999999999999999999999999999999999999999999999
Q ss_pred HhccccCCCCcchhhHHHHHHHHHHhCccccchhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHH
Q 007976 329 LAKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLL 408 (582)
Q Consensus 329 l~~~~~~~~~~~~~~~~s~~~l~~ry~~d~~~~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~L 408 (582)
+.+.. ..|++.+|+.++++||++|. .|+++|+++|++|||+|++.|++.. ++++++||+|||+|
T Consensus 306 ~~~~~-----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~~l~~~~~l~~---------~~~~~~lL~~Aa~L 369 (513)
T 1u6z_A 306 EGRFR-----HQDVRSRTASSLANQYHIDS--EQARRVLDTTMQMYEQWREQQPKLA---------HPQLEALLRWAAML 369 (513)
T ss_dssp HHHHT-----TCCHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHHHHHHHHHCGGGC---------CHHHHHHHHHHHHH
T ss_pred HHhcc-----cccHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHhhCcCC---------ChhHHHHHHHHHHH
Confidence 87631 23788899999999999987 8999999999999999999987421 23557999999999
Q ss_pred hhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcCCCCCCCchhhcCCCHHHHHHHHHHHHHH
Q 007976 409 HNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIV 488 (582)
Q Consensus 409 HdIG~~I~~~~h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iL 488 (582)
||||++||+++||+||+|||+|++ ++||||+|+. ++|++++|||++.|+..++.+..|++ +.+++|++||
T Consensus 370 hdiG~~I~~~~~~~Hs~yii~n~~-l~G~s~~e~~------~lA~l~~~h~~~~~~~~~~~~~~l~~---~~v~~L~~iL 439 (513)
T 1u6z_A 370 HEVGLNINHSGLHRHSAYILQNSD-LPGFNQEQQL------MMATLVRYHRKAIKLDDLPRFTLFKK---KQFLPLIQLL 439 (513)
T ss_dssp TTTTTTTCSTTHHHHHHHHHHHSC-CTTCCHHHHH------HHHHHHHTSSSCCCCTTCCCCSSCCH---HHHHHHHHHH
T ss_pred HHccCcCCccccchhHHHHHhcCC-CCCCCHHHHH------HHHHHHHHhCCCCCcchhhhhhccCH---HHHHHHHHHH
Confidence 999999999999999999999999 9999999999 99999999999998866666788876 2589999999
Q ss_pred HHHHHhccccCCC-Ccc-eEEEEeCceeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCceEEEEeecCCC
Q 007976 489 RLSVILQQNDCVN-LRG-VDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVGSSSSS 566 (582)
Q Consensus 489 RlA~~Ld~s~~~~-i~~-i~~~~~~~~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~~~~~~ 566 (582)
|||++||++|.+. +++ ++++.+++.++|+++.. |..+ ..+| .|.+++++++|+++||.++.+...++|.
T Consensus 440 RlA~~Ld~~~~~~~i~~~~~~~~~~~~l~l~~~~~------~~~~-~~Le--~~~l~~~~~~~~~~~g~~l~l~~~~~~~ 510 (513)
T 1u6z_A 440 RLGVLLNNQRQATTTPPTLTLITDDSHWTLRFPHD------WFSQ-NALV--LLDLEKEQEYWEGVAGWRLKIEEESTPE 510 (513)
T ss_dssp HHHHHTTTTGGGCCCCSCCEEEEETTEEEEEECTT------GGGG-CHHH--HHHHHHHHHHHTTSTTCEEEEEECCCC-
T ss_pred HHHHHhccccCCCCCCCeeEEEEECCEEEEEEcCc------cccc-CcHH--HHHHHHHHHHHHHHhCCeEEEEECCCcc
Confidence 9999999999888 899 99998888888887543 2222 2243 6999999999999999999999888765
Q ss_pred C
Q 007976 567 N 567 (582)
Q Consensus 567 ~ 567 (582)
.
T Consensus 511 ~ 511 (513)
T 1u6z_A 511 I 511 (513)
T ss_dssp -
T ss_pred c
Confidence 3
No 2
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=4e-100 Score=838.38 Aligned_cols=487 Identities=20% Similarity=0.248 Sum_probs=427.7
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEE
Q 007976 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA 91 (582)
Q Consensus 12 ~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~ 91 (582)
.+++|+|||||||+||+|+++. ++.++++++.|++||||+|++.+|.|++++|+|+++||++|+++|++|+|+ +|++
T Consensus 14 ~~~~AaIDiGSNS~rL~I~~~~-~~~~~~~~~~k~~vrLg~gl~~~g~Ls~eai~r~~~~L~~F~~~~~~~~v~--~v~~ 90 (508)
T 3hi0_A 14 LAPVSVIDIGSNSVRLVVYEGL-SRAPAVLFNEKVLCGLGKGLALTGRMHEEGVTRALMALRRFHVLSEQAQAQ--KLYV 90 (508)
T ss_dssp CCCEEEEEECSSEEEEEEESCS-SSSCCEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCS--EEEE
T ss_pred CCeEEEEEECCccEEEEEEEEc-CCCceEEEEEeEEeecccCccccCCcCHHHHHHHHHHHHHHHHHHHhCCCC--eEEE
Confidence 4679999999999999999986 567899999999999999999999999999999999999999999999995 7999
Q ss_pred EEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEE
Q 007976 92 VATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESV 171 (582)
Q Consensus 92 vATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Sl 171 (582)
|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.++++. .+++++||||||||+++++++++..++|+
T Consensus 91 vATsA~R~A~N~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~--~~~lvvDIGGGStEl~~~~~~~~~~~~Sl 168 (508)
T 3hi0_A 91 LATAAAREAENGPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQ--PDGIAGDLGGGSLELIDIKDKSCGEGITL 168 (508)
T ss_dssp EECTHHHHSTTHHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSS--CEEEEEEECSSCEEEEEEETTEECCCEEE
T ss_pred EeeHHHHcCcCHHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCC--CCeEEEEeCCCceEEEEeeCCeeeeEEEe
Confidence 9999999999999999999999999999999999999999999998874 34799999999999999999999999999
Q ss_pred echHHHHHHhhcCCCCCHHHHHHHHHHHHHHHhhcchhHHHHhcCCcEEEeecHHHHHHHHHHH--cCCCcccccCCCCC
Q 007976 172 NLGHVSLSEKFGTCSGNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV--SGYDRDFVDNVGDF 249 (582)
Q Consensus 172 plG~vrl~e~f~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~r~la~~~~--~~y~~~~~~~~~~~ 249 (582)
|+|||||++.+.. ++..+++|+++.+..+ .+++...++..+||+|||+|+++++.. ..||.+.+
T Consensus 169 ~lG~vrl~e~~~~------~~~~~~~~i~~~l~~~--~~~~~~~~~~~~ig~gGt~~~la~i~~~~~~y~~~~~------ 234 (508)
T 3hi0_A 169 PLGGLRLSEQSDG------SLEKAATIARKHVKSF--AKLLAAGEGRTFYAVGGTWRNIAKLHMEISGYPLHMM------ 234 (508)
T ss_dssp SCCHHHHHHHTTT------CHHHHHHHHHHHHHTT--HHHHHTTTTSEEEEESHHHHHHHHHHHHHHTCSCCCC------
T ss_pred cceEEehhhcChh------HHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEehHHHHHHHHHhhccCCCcccc------
Confidence 9999999998432 4677899999999762 233444456789999999999999763 46775444
Q ss_pred CCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHHH
Q 007976 250 GGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADSL 329 (582)
Q Consensus 250 ~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~gLReGll~~~l 329 (582)
|++.|+.+++.++++++..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||+.|||||++++++
T Consensus 235 ----~~~~i~~~~l~~~~~~l~~~~~~--~~~~~~gl~~~Radvi~~g~~Il~~i~~~~~~~~i~vs~~glREGll~~~l 308 (508)
T 3hi0_A 235 ----QGYELPLEEMLNFLEEVIVSRDS--KDPAWQAVSKNRRSLLPFGAIAMREVLRAMKPAKIAFSAQGVREGYLYSLL 308 (508)
T ss_dssp ----TTCEEEHHHHHHHHHHHHTCCC------CCHHHHHCTTCSHHHHHHHHHHHHHHHCCSEEEECSCCHHHHHHHTTS
T ss_pred ----cCcEEcHHHHHHHHHHHHcCCHH--HHHhccCCCHhHHHHHHHHHHHHHHHHHHcCcCEEEECCCcHHHHHHHHHh
Confidence 46899999999999999999998 899999999999999999999999999999999999999999999999998
Q ss_pred hccccCCCCcchhhHHHHHHHHHHhCccccchhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHh
Q 007976 330 AKVFDGYDLNANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLH 409 (582)
Q Consensus 330 ~~~~~~~~~~~~~~~~s~~~l~~ry~~d~~~~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LH 409 (582)
.+... ..|++.+|+++++.||++|. .|+++|+++|++||||++ ++ .++++++||+|||+||
T Consensus 309 ~~~~~----~~d~~~~s~~~l~~ry~~d~--~ha~~V~~~a~~Lf~ql~-~~------------~~~~~~~lL~~Aa~Lh 369 (508)
T 3hi0_A 309 TEAER----ESDPLLVAADELAILRARSP--EHARELADWSGRTFPVFG-ID------------ETEEESRYRQAACLLA 369 (508)
T ss_dssp CHHHH----HSCHHHHHHHHHHHHHCSCH--HHHHHHHHHHHHHGGGGT-CC------------CCHHHHHHHHHHHHHT
T ss_pred hhhcc----ccCHHHHHHHHHHHHhCcCH--HHHHHHHHHHHHHHHhhc-cC------------CChHHHHHHHHHHHHH
Confidence 65322 23778899999999999987 899999999999999997 43 2346789999999999
Q ss_pred hcccccCCCCchhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcCC-CCCCC-chhhcCCCHHHHHHHHHHHHH
Q 007976 410 NIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRKK-FPRSH-HAFLEEFPEQAKQKFRVLCAI 487 (582)
Q Consensus 410 dIG~~I~~~~h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk~-~~~~~-~~~~~~L~~~~~~~v~kL~~i 487 (582)
||||+||+++||+||+|||+|++ ++||||+|+. ++|++++|+++. .|+.. ++++..|+++++..+.+|++|
T Consensus 370 diG~~i~~~~~~~Hs~yii~n~~-l~Gfs~~e~~------~lA~~~~~r~~~~~~~~~~~~~~~ll~~~~~~~~~~L~~i 442 (508)
T 3hi0_A 370 DISWRAHPDYRGLQALNIIAHSS-FVAITHPGRA------YIALANYYRFEGLNDNGTTEPLAAMAGERLQELGKLLGGL 442 (508)
T ss_dssp TTTTTSCGGGHHHHHHHHHHHBC-CCSCCHHHHH------HHHHHHHHHHHCSCCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHhCCCchHHHHHHHHHcCC-CCCCCHHHHH------HHHHHHHHhcCCCCccchhhHHHhhCCHHHHHHHHHHHHH
Confidence 99999999999999999999999 9999999999 999877544432 23332 344567889999999999999
Q ss_pred HHHHHHhccccCCCCcceEEEEeCc---eeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCceEEEEe
Q 007976 488 VRLSVILQQNDCVNLRGVDFFHSYE---GFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVG 561 (582)
Q Consensus 488 LRlA~~Ld~s~~~~i~~i~~~~~~~---~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~ 561 (582)
||||++||+++.+.+++++++.+++ .++|+++.. + +.++ .|.++++.++|+++||+++.|++
T Consensus 443 LRlA~~L~~~~~~~i~~~~~~~~~~~~~~l~l~~~~~---------~-~~l~--~~~~~~~~~~~~~~~g~~~~~~~ 507 (508)
T 3hi0_A 443 LRVVYLFSASMPGVVDHLKFRKSDNPDIDLEFVVPHD---------Y-CDFA--GERLDGRLQQLAKLTGKRLAFVF 507 (508)
T ss_dssp HHHHHHHHTTCSSSGGGCEEEECSSTTCSEEEEECGG---------G-GGGC--CHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCcCCCCceEEEECCCCceEEEEEECCC---------c-HHHH--HHHHHHHHHHHHHHHCCCeEEEe
Confidence 9999999999999999999998888 888888543 1 2233 59999999999999999999986
No 3
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=100.00 E-value=1.8e-68 Score=554.00 Aligned_cols=303 Identities=26% Similarity=0.461 Sum_probs=279.8
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (582)
+++|+|||||||+||+|+++.+ +.++++++.+++||||+|++.+|.|++++|+|++++|++|+++|++|+|+ ++++|
T Consensus 4 ~~~A~IDiGSNsirL~I~~~~~-~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~--~v~~v 80 (315)
T 3mdq_A 4 QRIGVIDMGTNTFHLLITDIVN-DRPHTLVNEKSAVGLGKGGITKGFITEEAMDRALDTLKKFRVILDEHAVV--HVIAT 80 (315)
T ss_dssp CEEEEEEECSSEEEEEEEEEET-TEEEEEEEEEEECCSSTTTGGGTCCCHHHHHHHHHHHHHHHHHHHHTTCC--EEEEE
T ss_pred ceEEEEEecCCcEEEEEEEEcC-CceEEeeeceeeeeccccccccCCcCHHHHHHHHHHHHHHHHHHHHcCCC--EEEEE
Confidence 3699999999999999999985 78999999999999999999999999999999999999999999999995 79999
Q ss_pred EehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEe
Q 007976 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (582)
Q Consensus 93 ATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Slp 172 (582)
||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++..+++++++||||||||+++++++++..++|+|
T Consensus 81 ATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Sl~ 160 (315)
T 3mdq_A 81 GTSAVRSGSNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILWKQSFE 160 (315)
T ss_dssp ECHHHHHCTTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEEEEEES
T ss_pred eeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEeeeEEEe
Confidence 99999999999999999999999999999999999999999999988655679999999999999999999999999999
Q ss_pred chHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHhhcchhHHHHhcCCcEEEeecHHHHHHHHHHH----cCCCcccccCCC
Q 007976 173 LGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVV----SGYDRDFVDNVG 247 (582)
Q Consensus 173 lG~vrl~e~f~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~r~la~~~~----~~y~~~~~~~~~ 247 (582)
+|+|||+++|+..+ ++..+++++++|+++.+... .++++..++..+||+|||+|+++++.. ..|+.+.+
T Consensus 161 lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~~l~~~--~~~~~~~~~~~lig~gGt~~~la~~~~~~~~~~y~~~~~---- 234 (315)
T 3mdq_A 161 IGGQRLIDRFHVHDPMREDDRVMMHNYFDEVLVPL--EKAINTWRPTQLIGCSGTFDTLAEMNIQHHREKIALEKQ---- 234 (315)
T ss_dssp CCHHHHHHHSCCCSSCCHHHHHHHHHHHHHHTHHH--HHHHHHHCCCEEEEESHHHHHHHHHHHHHHTCCCCGGGC----
T ss_pred chhhHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH--HHHHhhcCCCEEEEEchHHHHHHHHHHhcccCCCCcccc----
Confidence 99999999998865 67888999999999999864 234455567789999999999999763 45765544
Q ss_pred CCCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHH
Q 007976 248 DFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVAD 327 (582)
Q Consensus 248 ~~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~gLReGll~~ 327 (582)
|++.++.+++++++++|..++.+ ++.+++||+++|+|+|+||++|+.++|+.+++++|+||+.|||||++++
T Consensus 235 ------~~~~i~~~~l~~~~~~l~~~~~~--~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreG~l~~ 306 (315)
T 3mdq_A 235 ------TSYLLSLPDFNRLRKQLVASTRR--ERLAIAGMIELRADMVVVAICLIEHVLKLVSTNAITVSTYSLKEGVLYT 306 (315)
T ss_dssp ------SEEEEEHHHHHHHHHHHHHCCHH--HHHTSTTCCHHHHHHHHHHHHHHHHHHHHSCCSEEEEESCCHHHHHHHH
T ss_pred ------cCcEEcHHHHHHHHHHHHcCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHcCcCEEEECCccHHHHHHHH
Confidence 46899999999999999999988 9999999999999999999999999999999999999999999999999
Q ss_pred HHhcc
Q 007976 328 SLAKV 332 (582)
Q Consensus 328 ~l~~~ 332 (582)
++.+.
T Consensus 307 ~~~~~ 311 (315)
T 3mdq_A 307 MLDGV 311 (315)
T ss_dssp HHHTC
T ss_pred Hhhhh
Confidence 98654
No 4
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=100.00 E-value=3.2e-66 Score=542.40 Aligned_cols=310 Identities=27% Similarity=0.369 Sum_probs=274.8
Q ss_pred ccccCCCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Q 007976 6 SYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNIS 85 (582)
Q Consensus 6 ~~~~~~~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~ 85 (582)
+-|...++++|+|||||||+||+|+++.+++.++++++.+++||||+|++.+|.|++++|+|++++|++|+++|++|+|+
T Consensus 9 ~~~~~~~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~aL~~f~~~~~~~~v~ 88 (343)
T 3cer_A 9 SHMSKESVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQDVDKTHRFADEALERAYVAAREFAGVIAEHPID 88 (343)
T ss_dssp -----CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cccCCCCCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 33444567899999999999999999986677999999999999999999999999999999999999999999999995
Q ss_pred CccEEEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCC--CCCceEEEEeCCCceEEEEeeC-
Q 007976 86 RDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTEFVIGKR- 162 (582)
Q Consensus 86 ~~~i~~vATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~--~~~~~lviDIGGGStEl~~~~~- 162 (582)
+|++|||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++. .+.+++++||||||||++++++
T Consensus 89 --~v~~vATsA~R~A~N~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~ 166 (343)
T 3cer_A 89 --GLRFVATSATRDAENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDG 166 (343)
T ss_dssp --EEEEEECHHHHHCTTHHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCS
T ss_pred --eEEEEecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecC
Confidence 79999999999999999999999999999999999999999999999998875 4456999999999999999988
Q ss_pred -----CeEEEEEEEechHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHhhcchhHHHHhcCCcEEEeecHHHHHHHHHHHc
Q 007976 163 -----GKVVFCESVNLGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS 236 (582)
Q Consensus 163 -----~~~~~~~SlplG~vrl~e~f~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~r~la~~~~~ 236 (582)
+++.++.|+|+|+++++++|+.++ ++..+++.+++|+++.+.... ..++..++..+||+|||+|+++++...
T Consensus 167 ~~~~~~~~~~~~SlplG~v~lt~~~~~~~~~~~~~~~~~~~~i~~~l~~~~--~~~~~~~~~~lvg~gGt~~~la~l~~~ 244 (343)
T 3cer_A 167 VSAPTTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDEHIDEAF--RTVDAGKARTIIGVSGTVTTMTALAMG 244 (343)
T ss_dssp SSSCTTSCSEEEEESCCHHHHHHHTCCSSSCCHHHHHHHHHHHHHHHHHHH--TTSCGGGCSEEEEESHHHHHHHHHHTT
T ss_pred ccCcccccceeEEEehhHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH--HhhhhcCCcEEEEEchHHHHHHHHHhh
Confidence 555699999999999999998764 678889999999999997531 112222345799999999999998643
Q ss_pred --CCCcccccCCCCCCCCccccccCHHHHHHHHHHHHcCCCcHHHHHhhcCCCccchhhHHHHHHHHHHHHHHh------
Q 007976 237 --GYDRDFVDNVGDFGGCKRDWRLSRGELKGIVERLCCGGDGEVERVRRERFFKRRSEFIVAGAVLLDEIFELL------ 308 (582)
Q Consensus 237 --~y~~~~~~~~~~~~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er~~~~gl~~~Radii~~g~~il~~l~~~~------ 308 (582)
.|+.+.+ |++.++.+++.+++++|..++.+ ++.+++||+++|+|+|+||++|+.++|+.+
T Consensus 245 ~~~y~~~~v----------hg~~l~~~~l~~~~~~l~~~~~~--er~~~~gl~~~Radvi~~g~~Il~~i~~~~~~~~~~ 312 (343)
T 3cer_A 245 LKEYDHTVV----------DGHRLSFEDAYAVDDKFLRMTRA--ERREYKTIHPGRIDVVGGGAVVWSRVLARVSEAAKA 312 (343)
T ss_dssp CSSCCHHHH----------TTCEEEHHHHHHHHHHHHSSCHH--HHHTCTTSCTTTTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCcccc----------CCeEEcHHHHHHHHHHHHcCCHH--HHHhcCCCChhHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4654433 46799999999999999999988 999999999999999999999999999999
Q ss_pred ----CCCeEEECCcchHHHHHHHHHhc
Q 007976 309 ----GIEEMEVSGYGLGEGVVADSLAK 331 (582)
Q Consensus 309 ----~~~~i~vs~~gLReGll~~~l~~ 331 (582)
++++|+||+.|||||++++++.+
T Consensus 313 ~~~~~~~~i~vs~~glreGll~~~~~~ 339 (343)
T 3cer_A 313 DHGEAIDSFVASEHGLLDGIVLDYGRR 339 (343)
T ss_dssp HHSCCCCEEEEESCSHHHHHHHHHHHH
T ss_pred cccCCCCEEEECCCcHHHHHHHHHHHH
Confidence 99999999999999999998754
No 5
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=100.00 E-value=8.3e-65 Score=526.04 Aligned_cols=296 Identities=31% Similarity=0.425 Sum_probs=271.7
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (582)
.++|+|||||||+||+|+++. ++.++++++.+++||||++++.+|.|++++|+|++++|++|++++++|+++ ++++|
T Consensus 12 m~~a~IDiGSns~rl~I~~~~-~~~~~~i~~~k~~vrLg~g~~~~g~ls~eai~r~~~~L~~f~~~~~~~~v~--~i~~v 88 (315)
T 1t6c_A 12 MRVASIDIGSYSVRLTIAQIK-DGKLSIILERGRITSLGTKVKETGRLQEDRIEETIQVLKEYKKLIDEFKVE--RVKAV 88 (315)
T ss_dssp EEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEEECCTTTTHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCS--EEEEE
T ss_pred cEEEEEEECcCcEEEEEEEEc-CCcEEEEeeeeEEeecCCCccccCCcCHHHHHHHHHHHHHHHHHHHHCCCC--eEEEE
Confidence 369999999999999999997 678999999999999999999999999999999999999999999999994 79999
Q ss_pred EehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEe
Q 007976 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (582)
Q Consensus 93 ATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~Slp 172 (582)
||+|+|+|+|+++|+++|+++||++|+||||+|||+|+|+||.+.++ ...+++++||||||||+++++++++.+++|+|
T Consensus 89 ATsA~R~A~N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~-~~~~~lvvDIGGGStEl~~~~~~~~~~~~Sl~ 167 (315)
T 1t6c_A 89 ATEAIRRAKNAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK-PEGEVCVVDQGGGSTEYVFGKGYKVREVISLP 167 (315)
T ss_dssp ECHHHHTSTTHHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC-CCSEEEEEEEETTEEEEEEEETTEEEEEEEEC
T ss_pred EcHHHHcCcCHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc-cCCCEEEEEeCCCcEEEEEEeCCceeeEEEEe
Confidence 99999999999999999999999999999999999999999999887 45569999999999999999999999999999
Q ss_pred chHHHHHHhhcCCC-CCHHHHHHHHHHHHHHHhhcchhHHHHhcCCcEEEeecHHHHHHHHHHHc--CCCcccccCCCCC
Q 007976 173 LGHVSLSEKFGTCS-GNFEEVLKMREYVRMVILEFGLVEKVKESGFEVAVGSSGTIRAIEKAVVS--GYDRDFVDNVGDF 249 (582)
Q Consensus 173 lG~vrl~e~f~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~liG~gGt~r~la~~~~~--~y~~~~~~~~~~~ 249 (582)
+|+++++++|...+ +++.+++.+++|+++.+... . +.. ..+||+|||+|+++++... .|+.+.+
T Consensus 168 ~G~v~l~e~~~~~~~~~~~~~~~~~~~i~~~l~~~--~---~~~--~~lig~gGt~~~la~~~~~~~~y~~~~v------ 234 (315)
T 1t6c_A 168 IGIVNLTETFFKQDPPTEEEVKRFFEFLEKELSKV--K---KPV--DTIVGLGGTITTLAALEYNVYPYDPQKV------ 234 (315)
T ss_dssp CCHHHHHHHHCCSSSCCHHHHHHHHHHHHHHHTTT--C---CCC--SEEEEESHHHHHHHHHHTTCCSCCHHHH------
T ss_pred ccHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH--H---hhc--CEEEEECcHHHHHHHHHhhccCCCcccc------
Confidence 99999999998754 67888899999999999653 1 111 4699999999999998643 4654433
Q ss_pred CCCccccccCHHHHHHHHHHHHcCCCcHHHH-HhhcCCCccchhhHHHHHHHHHHHHHHhCCCeEEECCcchHHHHHHHH
Q 007976 250 GGCKRDWRLSRGELKGIVERLCCGGDGEVER-VRRERFFKRRSEFIVAGAVLLDEIFELLGIEEMEVSGYGLGEGVVADS 328 (582)
Q Consensus 250 ~~~~~~~~i~~~~l~~l~~~l~~~~~~~~er-~~~~gl~~~Radii~~g~~il~~l~~~~~~~~i~vs~~gLReGll~~~ 328 (582)
|++.++.+++++++++|..++.+ ++ .+++||+++|+|+|+||++|+.++|+.+++++|+||+.|||||+++++
T Consensus 235 ----~g~~l~~~~l~~~~~~l~~~~~~--er~~~~~gl~~~Rad~i~~g~~Il~~i~~~~~~~~i~vs~~glreGll~~~ 308 (315)
T 1t6c_A 235 ----HGKVLTYGQIKKWFDTFKEIPSE--ERSKRFRQVEDRRAKVILAGIGIFLKTLEIFEKDCLIVSDWGLREGVLVSE 308 (315)
T ss_dssp ----TTCEEEHHHHHHHHHHHTTSCHH--HHHHHSTTSCGGGTTTHHHHHHHHHHHHHHHTCSEEEEESCCHHHHHHHHH
T ss_pred ----CCeEEcHHHHHHHHHHHHcCCHH--HHHHhcCCCChhHHHHHHHHHHHHHHHHHHcCcCEEEECCCchHHHHHHHH
Confidence 46799999999999999999988 99 999999999999999999999999999999999999999999999998
Q ss_pred Hhc
Q 007976 329 LAK 331 (582)
Q Consensus 329 l~~ 331 (582)
+.+
T Consensus 309 ~~~ 311 (315)
T 1t6c_A 309 VLK 311 (315)
T ss_dssp HHH
T ss_pred Hhh
Confidence 854
No 6
>3rf0_A Exopolyphosphatase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, hydrolase; HET: MSE; 1.80A {Yersinia pestis}
Probab=100.00 E-value=2.2e-39 Score=316.51 Aligned_cols=198 Identities=18% Similarity=0.286 Sum_probs=169.5
Q ss_pred chhhHHHHHHHHHHhCccccchhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchH--HHHHHHHHHhhcccccCC
Q 007976 340 ANARWRSVVRLAMRFNNKKRVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDL--EYLEAACLLHNIGHFTSK 417 (582)
Q Consensus 340 ~~~~~~s~~~l~~ry~~d~~~~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~--~LL~~Aa~LHdIG~~I~~ 417 (582)
.|++.+|+.++++||++|. .|+++|+++|.+|||++++.|++ +++++ +||+|||+|||||++||+
T Consensus 3 ~Dir~~sv~~l~~ry~vd~--~ha~~V~~~A~~Lf~~l~~~~~l-----------~~~~~~~~lL~~Aa~LHdIG~~I~~ 69 (209)
T 3rf0_A 3 QDIRQRTAKSLADHYNIDR--EQARRVLETTEQLYTQWLAQNTK-----------LVQPQLEALLKWAAMLHEVGLSINH 69 (209)
T ss_dssp HHHHHHHHHHHHHHHTCCH--HHHHHHHHHHHHHHHHHHHHCGG-----------GCCHHHHHHHHHHHHHTTGGGGTCS
T ss_pred CCHHHHHHHHHHHHhCCCH--HHHHHHHHHHHHHHHHHHHHhCC-----------ChhHHHHHHHHHHHHHHHcccccCc
Confidence 4889999999999999987 89999999999999999999875 34567 999999999999999999
Q ss_pred CCchhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcCCCCCCCchhhcCCCHHHHHHHHHHHHHHHHHHHhccc
Q 007976 418 KGYHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQN 497 (582)
Q Consensus 418 ~~h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~s 497 (582)
++||+||+|||.|++ ++||||+|+. ++|++++|||++.|+.. +..+++.++..+.+|+++||||++||++
T Consensus 70 ~~~hkHs~Yii~n~~-l~Gfs~~e~~------~lA~lv~~hr~~~~~~~---~~~l~~~~~~~~~~L~~iLRLA~~L~~~ 139 (209)
T 3rf0_A 70 SGMHRHSAYILQNTN-LPGFNQEQQT------LLATLVRMHRKAIKLDE---LPRLNLFKKKYYLPLIQLLRLSTLLNNQ 139 (209)
T ss_dssp TTHHHHHHHHHHHSC-CTTCCHHHHH------HHHHHHHTSSSCCCGGG---CCCCSSCCHHHHHHHHHHHHHHHHHTTT
T ss_pred ccchHHHHHHHhCCC-CCCCCHHHHH------HHHHHHHHhcCCCChhh---hhhcCHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999 9999999999 99999999999887632 3346778888999999999999999999
Q ss_pred cCCCC-c-ceEEEEeCceeEEEEeeCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHcCceEEEEeecCCCCccc
Q 007976 498 DCVNL-R-GVDFFHSYEGFKLVIKEARDQPYLPGSSQPTLDNIEAELEKELEHFKKIFKQELLVVGSSSSSNDRK 570 (582)
Q Consensus 498 ~~~~i-~-~i~~~~~~~~~~L~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~f~~~fg~~l~i~~~~~~~~~~~ 570 (582)
+.+.+ + +++++.+++.++|+++.. |. ...++..+.++++.++|+++||.++.|. ..+|++-+|
T Consensus 140 r~~~~l~~~~~l~~~~~~l~L~~~~~------wl---~~~pL~~~~l~~e~~~~~~~~g~~l~i~-~~~~~~~~~ 204 (209)
T 3rf0_A 140 RQSTTTPESLRLITDDSHWTLRFPHG------YL---TQNSLVQLDFEREQAYWDDVVGWKLVIE-EEEPDEAAK 204 (209)
T ss_dssp GGGCCCCSCCEEEEETTEEEEEECTT------HH---HHCHHHHHHHHHHHHHHTTSTTCEEEEE-ECCCC----
T ss_pred ccCCCCCCceEEEEcCCEEEEEeCcc------cc---ccCHHHHHHHHHHHHHHHHHhCeeeEEE-ecCcchhhh
Confidence 99874 7 899998899999988543 21 1123456899999999999999999997 445555443
No 7
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=99.96 E-value=4.5e-29 Score=261.67 Aligned_cols=154 Identities=18% Similarity=0.150 Sum_probs=129.9
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEe-----eeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCc
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDT-----LKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRD 87 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~-----~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~ 87 (582)
+++||||+||||+||.|++..+++.++++++ .+..++|+++... +++++++++ +|++ ++.++++
T Consensus 3 ~~~avID~GSns~Rl~I~~~~~~~~~~~i~~~~~~~~k~~~gLs~~~~~-----~~~~~~~l~---~f~~-~~~~~~~-- 71 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPN-----SVTIDAYLT---MLLA-DAPIHNI-- 71 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCS-----HHHHHHHHH---HHHT-TCSCCSE--
T ss_pred CEEEEEEcCCCCeEEEEEEEcCCCCCceeEeeeeeeeccCCChhhcCCC-----HHHHHHHHH---HHHH-HHhcCCC--
Confidence 4689999999999999999986555777777 5666777777643 899998876 8888 7878874
Q ss_pred cEEEEEehhhhhcCC--hHHHHHHHHHHc-------CCcEEEeChHHHHHHHHhhhhccCCC----CCCceEEEEeCCCc
Q 007976 88 HTRAVATAAVRAAEN--KDEFVECVREKV-------GFEVDVLTGEQEAKFVYMGVLQFLPV----FDRLVLSVDIGGGS 154 (582)
Q Consensus 88 ~i~~vATsA~R~A~N--~~~fl~~I~~~t-------G~~i~VIsgeEEA~l~~~gv~~~l~~----~~~~~lviDIGGGS 154 (582)
.|+++||+|+|+|+| +++|+++|+++| |+.|+||||+|||+|+|+||...++. .++..+++||||||
T Consensus 72 ~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g~~v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGS 151 (353)
T 3aap_A 72 PVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQLVEAKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGAS 151 (353)
T ss_dssp EEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEEEEEEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSE
T ss_pred cEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCCCeEEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCc
Confidence 799999999999999 999999999999 99999999999999999999877642 22358999999999
Q ss_pred eEEEEeeC--CeEEEE--EEEechHHH
Q 007976 155 TEFVIGKR--GKVVFC--ESVNLGHVS 177 (582)
Q Consensus 155 tEl~~~~~--~~~~~~--~SlplG~vr 177 (582)
|||+++.+ +.+... .|+|+|++.
T Consensus 152 tei~~~~~~~~~~~~~~~~sl~lG~~~ 178 (353)
T 3aap_A 152 VQIVFPMPKNAEISKHNQVELNIYGQN 178 (353)
T ss_dssp EEEEEECCCCTTSCGGGEEEEEETTEE
T ss_pred eEEEEecCCccccCCCceEEEEECCcc
Confidence 99999854 345544 899999965
No 8
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=99.91 E-value=3.1e-24 Score=231.56 Aligned_cols=159 Identities=18% Similarity=0.154 Sum_probs=126.2
Q ss_pred ceEEEEEecccceEEEEEEEeCCC-CEEEEEeeeeeeee-ccCCCcCCCCCHHHHHHHHHHHHHHHHHH---HHcCCCCc
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNG-KFLTIDTLKQPVIL-GRDLSSSCSISTQSQARSVESLLMFRDII---QSHNISRD 87 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~-~~~~l~~~k~~vrL-g~g~~~~g~Ls~e~i~r~~~~L~~f~~~~---~~~~v~~~ 87 (582)
++.+|||+||||+||.|++...+. ....+.+....+++ +.|+...+ ..++++.+.+.+|.+|+... +.++++
T Consensus 34 ~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~~~~~~~~Gls~~~-~~pe~~~~~l~~Ll~~a~~~iP~~~~~~t-- 110 (456)
T 3cj1_A 34 KYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDVQGGGISSYA-NDPSKAGQSLVRCLEQALRDVPRDRHAST-- 110 (456)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEEEEECSSSCGGGGT-TSTHHHHHHTHHHHHHHHHHSCHHHHTTC--
T ss_pred eEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeeeeeeeccccccccc-CCHHHHHHHHHHHHHHHHHhCCHHHcCCc--
Confidence 456799999999999999987431 22223334455677 88887766 67999999999999998754 888885
Q ss_pred cEEEEEehhhhhcC-----ChHHHHHHHHHHcC------CcEEEeChHHHHHHHHhhhhccCCCC-------------CC
Q 007976 88 HTRAVATAAVRAAE-----NKDEFVECVREKVG------FEVDVLTGEQEAKFVYMGVLQFLPVF-------------DR 143 (582)
Q Consensus 88 ~i~~vATsA~R~A~-----N~~~fl~~I~~~tG------~~i~VIsgeEEA~l~~~gv~~~l~~~-------------~~ 143 (582)
.|+++||+|||+|+ |+++|+++|++.+| ..|+||||+|||+|+|+||...+... .+
T Consensus 111 ~v~~~ATAgmR~a~~~~~~n~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~ 190 (456)
T 3cj1_A 111 PLYLGATAGMRLLNLTSPEATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKG 190 (456)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCC
T ss_pred eEEEEeeHHHhhCccccHHHHHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCC
Confidence 69999999999998 79999999999995 68999999999999999998766421 34
Q ss_pred ceEEEEeCCCceEEEEeeCCeE---EEEEEEech
Q 007976 144 LVLSVDIGGGSTEFVIGKRGKV---VFCESVNLG 174 (582)
Q Consensus 144 ~~lviDIGGGStEl~~~~~~~~---~~~~SlplG 174 (582)
..+++|||||||||++..++.+ .....+.+|
T Consensus 191 t~gvlDlGGgStqi~~~~~~~~~~~~~~~~l~l~ 224 (456)
T 3cj1_A 191 TLGAMDLGGASTQITFETTSPSEDPGNEVHLRLY 224 (456)
T ss_dssp CCEEEEECSSEEEEEEECCSCCSCGGGEEEEEET
T ss_pred ceEEEEcCCCceEEEeccCCccCCCCceEEEEeC
Confidence 5799999999999999876653 223445554
No 9
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=99.81 E-value=1.5e-19 Score=193.68 Aligned_cols=148 Identities=18% Similarity=0.222 Sum_probs=117.8
Q ss_pred eEE-EEEecccceEEEEEEEeCCC-CEEEEEeeeeeeee-ccCCCcCCCCCHHHHHHHHHHHHHHHHHH---HHcCCCCc
Q 007976 14 LFA-SIDMGTSSFKLLIIRAYPNG-KFLTIDTLKQPVIL-GRDLSSSCSISTQSQARSVESLLMFRDII---QSHNISRD 87 (582)
Q Consensus 14 ~~A-vIDIGSNSiRL~I~e~~~~~-~~~~l~~~k~~vrL-g~g~~~~g~Ls~e~i~r~~~~L~~f~~~~---~~~~v~~~ 87 (582)
.|| |||+|||++||.||+...+. +...+.+.....++ |.|+...+. .++++.+.++.|.+|+... +.++++
T Consensus 34 ~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~~~~~k~~gpGlSs~~~-~p~~~~~~l~~Ll~~a~~~vp~~~~~~t-- 110 (452)
T 3zx3_A 34 KYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQLEECQVKGPGISKYAQ-KTDEIAAYLAECMKMSTERIPASKQHQT-- 110 (452)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCCTTCCCCCEEEEEEECSSSCGGGGTT-CGGGHHHHHHHHHHHHHHHSCHHHHTTC--
T ss_pred eEEEEEEcCCCCcEEEEEEEeCCcCCCccccceeeeecccCCChhccCC-CHHHHHHHHHHHHHHHHHhCCHHHcCCc--
Confidence 455 89999999999999997421 12222234455677 788877776 8899999999999998864 777885
Q ss_pred cEEEEEehhhhhcC-----ChHHHHHHHHHHc---CC---cEEEeChHHHHHHHHhhhhccCCC----CCCceEEEEeCC
Q 007976 88 HTRAVATAAVRAAE-----NKDEFVECVREKV---GF---EVDVLTGEQEAKFVYMGVLQFLPV----FDRLVLSVDIGG 152 (582)
Q Consensus 88 ~i~~vATsA~R~A~-----N~~~fl~~I~~~t---G~---~i~VIsgeEEA~l~~~gv~~~l~~----~~~~~lviDIGG 152 (582)
.|.++||++||.+. |+++|++.|++.+ |+ .|+||||+|||.|+|+||...+.. ..+...++||||
T Consensus 111 pi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGG 190 (452)
T 3zx3_A 111 PVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGG 190 (452)
T ss_dssp EEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECS
T ss_pred cEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCC
Confidence 69999999999998 5799999999998 44 899999999999999999655432 124578999999
Q ss_pred CceEEEEeeCCe
Q 007976 153 GSTEFVIGKRGK 164 (582)
Q Consensus 153 GStEl~~~~~~~ 164 (582)
|||||++..++.
T Consensus 191 gStQi~f~~~~~ 202 (452)
T 3zx3_A 191 ASTQITFVPLNS 202 (452)
T ss_dssp SEEEEEECCSSC
T ss_pred CceEEEeccCCC
Confidence 999999976543
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.72 E-value=6.1e-17 Score=163.41 Aligned_cols=153 Identities=18% Similarity=0.226 Sum_probs=116.5
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCCccE
Q 007976 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSH-NISRDHT 89 (582)
Q Consensus 11 ~~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~-~v~~~~i 89 (582)
+++++++|||||||+|++|++ .++ +++.....+.+ ...+|.+.+ .+++.++|+.|.+.+..+ +.+ ..
T Consensus 26 ~~~~~~gIDiGS~s~k~vi~~--~~~--~~l~~~~~~~~----~l~~g~i~d--~~~~~~~l~~~~~~~~~~~~~~--~~ 93 (272)
T 3h1q_A 26 PPPYKVGVDLGTADIVLVVTD--QEG--IPVAGALKWAS----VVKDGLVVD--YIGAIQIVRELKAKVERLLGSE--LF 93 (272)
T ss_dssp CSCCEEEEECCSSEEEEEEEC--TTC--CEEEEEEEECC----CCBTTBCTT--HHHHHHHHHHHHHHHHHHSSSC--CC
T ss_pred CCCEEEEEEcccceEEEEEEC--CCC--cEEEEEeeccc----ccCCCEEEc--HHHHHHHHHHHHHHHHHhcCCc--cC
Confidence 446899999999999999963 333 34444433322 122344433 466677888887777665 554 34
Q ss_pred EEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEE
Q 007976 90 RAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCE 169 (582)
Q Consensus 90 ~~vATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~ 169 (582)
.+++|...+.+.|+.+++.++.+.+|+++..|+++.||...+.|.. .++++|||||||+++++.+|.+.+..
T Consensus 94 ~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~--------~~~viDiGggst~~~~~~~g~~~~~~ 165 (272)
T 3h1q_A 94 QAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN--------DGIVVDIGGGTTGIAVIEKGKITATF 165 (272)
T ss_dssp EEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS--------SEEEEEECSSCEEEEEEETTEEEEEC
T ss_pred eEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC--------CEEEEEECCCcEEEEEEECCEEEEEe
Confidence 6688888888999999999999999999999999999998887641 26999999999999999999999999
Q ss_pred EEechHHHHHHhhc
Q 007976 170 SVNLGHVSLSEKFG 183 (582)
Q Consensus 170 SlplG~vrl~e~f~ 183 (582)
|+|+|..++++.+.
T Consensus 166 ~~~~Gg~~~~~~l~ 179 (272)
T 3h1q_A 166 DEPTGGTHLSLVLA 179 (272)
T ss_dssp CBSCCHHHHHHHHH
T ss_pred cCCCcHHHHHHHHH
Confidence 99999999999653
No 11
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=98.26 E-value=1.7e-05 Score=83.20 Aligned_cols=71 Identities=23% Similarity=0.212 Sum_probs=54.7
Q ss_pred HHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEechHHHHHHhhc
Q 007976 112 EKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKFG 183 (582)
Q Consensus 112 ~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f~ 183 (582)
+..|+++..|.-+--|-....|...... .+...+++|||||+|.++++.+|.+.++.++|+|.-.+++...
T Consensus 161 ~~aGl~~~~i~~ep~Aaa~~~~~~~~~~-~~~~~~vvDiGggttdi~i~~~g~~~~~~~~~~GG~~i~~~i~ 231 (377)
T 2ych_A 161 RGAGLVPVVLDVKPFAGLYPLEARLAEE-PDRVFLVLDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIA 231 (377)
T ss_dssp HHTTCEEEEEEEHHHHTTGGGHHHHHTS-TTCEEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHH
T ss_pred HHCCCceEEEecchHHHHHHHHhhcccc-cCCeEEEEEECCCcEEEEEEECCEEEEEEeeechHHHHHHHHH
Confidence 4568888888777777655555432211 1234699999999999999999999999999999999988653
No 12
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.20 E-value=3.1e-05 Score=82.76 Aligned_cols=39 Identities=21% Similarity=0.203 Sum_probs=36.5
Q ss_pred ceEEEEeCCCceEEEEeeCCeEEEEEEEechHHHHHHhh
Q 007976 144 LVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (582)
Q Consensus 144 ~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (582)
..+++|||||+|.++++.+|.+.++.++|+|.-.+++..
T Consensus 207 gv~vvDiGggttdisi~~~g~~~~~~~i~~GG~~it~dI 245 (419)
T 4a2a_A 207 GVVVVNLGYNFTGLIAYKNGVPIKISYVPVGMKHVIKDV 245 (419)
T ss_dssp CEEEEEECSSSEEEEEEETTEEEEEEEESCCHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEECCEEEEEEecccHHHHHHHHH
Confidence 589999999999999999999999999999999998855
No 13
>4a57_A Nucleoside-triphosphatase 1; hydrolase; 2.00A {Toxoplasma gondii} PDB: 4a59_A* 4a5a_A* 4a5b_A 3agr_A
Probab=98.15 E-value=7.1e-06 Score=88.00 Aligned_cols=74 Identities=22% Similarity=0.346 Sum_probs=57.1
Q ss_pred cEEEEEehhhhhcC--ChHHHHHHHHHHcC-------C-------cEEEeChHHHHHHHHhhhhccCC-C----------
Q 007976 88 HTRAVATAAVRAAE--NKDEFVECVREKVG-------F-------EVDVLTGEQEAKFVYMGVLQFLP-V---------- 140 (582)
Q Consensus 88 ~i~~vATsA~R~A~--N~~~fl~~I~~~tG-------~-------~i~VIsgeEEA~l~~~gv~~~l~-~---------- 140 (582)
-|.+.||+.||.-. -++.+++.++...- + .++||||+||+.|.|+++-.-+. +
T Consensus 158 PV~L~ATAGMRLLp~~kqd~IL~aVr~~L~~sp~~~gF~F~~~~~~vrIIsG~EEGvYgWITvNYLLG~f~~~~~~~~~~ 237 (611)
T 4a57_A 158 PVMLCSTAGVRDFHEWYRDALFVLLRHLINNPSPAHGYKFFTNPFWTRPITGAEEGLFAFITLNHLSRRLGEDPARCMID 237 (611)
T ss_dssp EEEEEECTTSTTCCTTHHHHHHHHHHHHHTSCCGGGCCCEECCTTTSEECCHHHHHHHHHHHHHHHTTCCSSSCSEEEEC
T ss_pred cEEEEeeeecccCCHHHHHHHHHHHHHHHhcCCcccCcccccCCCceeecCCccceeeEeeehhhhhccccccccccccc
Confidence 48899999999874 36788888877653 1 28999999999999999853221 0
Q ss_pred -------CCCceEEEEeCCCceEEEEee
Q 007976 141 -------FDRLVLSVDIGGGSTEFVIGK 161 (582)
Q Consensus 141 -------~~~~~lviDIGGGStEl~~~~ 161 (582)
.....-++|+|||||+|++.-
T Consensus 238 ~~~~~~~~~~TvG~LDLGGASTQIaF~p 265 (611)
T 4a57_A 238 EYGVKQCRNDLAGVVEVGGASAQIVFPL 265 (611)
T ss_dssp TTSCEEEECCCCEEEEECSSCEEEEEEC
T ss_pred cccccCCCCceeEEEeeCCceEEEEecc
Confidence 123468999999999999853
No 14
>2pq7_A Predicted HD superfamily hydrolase; 104161995, HD domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.45A {Uncultured thermotogales bacterium} SCOP: a.211.1.1
Probab=97.47 E-value=0.00046 Score=66.87 Aligned_cols=99 Identities=15% Similarity=0.071 Sum_probs=68.3
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccC---CCCchhhhHHHHHc-CCCC
Q 007976 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS---KKGYHKQSCHIIMN-GDHL 434 (582)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~---~~~h~kHS~yiI~n-s~~l 434 (582)
+..|..+|+.+|..|..... . +..++.+||+|||||+..+ ...|...|+.++.+ .. -
T Consensus 34 ~~~H~~rV~~~a~~la~~~~----~--------------d~~~l~~AaLLHDIg~~~~~~~~~~H~~~ga~~a~~~L~-~ 94 (220)
T 2pq7_A 34 DISHTFRVMENASEIASREK----C--------------DLQKAIIAALLHDIKRPHEALTGVDHAESGAEYASGLLP-T 94 (220)
T ss_dssp SHHHHHHHHHHHHHHHHHHT----C--------------CHHHHHHHHHHTTTTHHHHHHHCCCHHHHHHHHHHHHGG-G
T ss_pred hHHHHHHHHHHHHHHHHHcC----C--------------CHHHHHHHHHHHcCCCcccCCCcCCHHHHHHHHHHHHHH-H
Confidence 34799999999998865442 1 2468999999999998654 34555668887754 21 2
Q ss_pred CCCCHHHHhhhhhHHHHHHHHHhhcCCCCCCCchhhcCCCHHHHHHHHHHHHHHHHHHHhcc
Q 007976 435 YGYSTDEIKHLVCLQLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 496 (582)
Q Consensus 435 ~G~s~~E~~~~~~~~~iA~iaryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~ 496 (582)
.|++..+.. .++.++++|...... ... ...+.|++.|+.||.
T Consensus 95 ~~~~~~~i~------~v~~~I~~H~~~~~~------~~~--------~~~a~Iv~dAD~Lda 136 (220)
T 2pq7_A 95 MGFDISFVA------EVSKAIRSHRYSGGL------TPT--------SLTGKILQDADRLDA 136 (220)
T ss_dssp GTCCHHHHH------HHHHHHHHCC-----------CCC--------SHHHHHHHHHHHGGG
T ss_pred CCCCHHHHH------HHHHHHHHcCcccCC------CCC--------CHHHHHHHHhhHHhh
Confidence 599999999 899999999853211 111 236678888888873
No 15
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=97.15 E-value=0.004 Score=65.74 Aligned_cols=75 Identities=13% Similarity=0.287 Sum_probs=46.2
Q ss_pred HHHHHHHHcCCcE-EEeChHHHHHHHHhhhhc-cCCCCCCceEEEEeCCCceEEEEe--eCCeEEE---EEEEechHHHH
Q 007976 106 FVECVREKVGFEV-DVLTGEQEAKFVYMGVLQ-FLPVFDRLVLSVDIGGGSTEFVIG--KRGKVVF---CESVNLGHVSL 178 (582)
Q Consensus 106 fl~~I~~~tG~~i-~VIsgeEEA~l~~~gv~~-~l~~~~~~~lviDIGGGStEl~~~--~~~~~~~---~~SlplG~vrl 178 (582)
.+..+-+..|+++ .+++..+-|-+.| +... ... .+...+|+|+|||+|.++++ .++.+.. ....++|...+
T Consensus 168 ~~~~a~~~AGl~~~~li~Ep~AAa~~~-~~~~~~~~-~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~ 245 (409)
T 4gni_A 168 ALIAAAAAADLEVLQLISEPAAAVLAY-DARPEATI-SDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIAL 245 (409)
T ss_dssp HHHHHHHHTTCEEEEEEEHHHHHHHHT-TC-------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHH
T ss_pred HHHHHHHHcCCCeEEEEcCHHHHHHHH-hcccccCC-CCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHH
Confidence 3444556679986 5566555554444 4332 122 24568999999999999885 4554332 23579998887
Q ss_pred HHhh
Q 007976 179 SEKF 182 (582)
Q Consensus 179 ~e~f 182 (582)
.+.+
T Consensus 246 d~~i 249 (409)
T 4gni_A 246 DKVL 249 (409)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 16
>3tm8_A BD1817, uncharacterized protein; HD-GYP, phosphodiesterase, unknown function, hydrolase,signa protein; 1.28A {Bdellovibrio bacteriovorus} PDB: 3tmb_A 3tmc_A 3tmd_A
Probab=96.98 E-value=0.0027 Score=65.35 Aligned_cols=102 Identities=14% Similarity=0.230 Sum_probs=67.3
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHH-HHHHHHHhhcccccCCC------------------Cch
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEY-LEAACLLHNIGHFTSKK------------------GYH 421 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~L-L~~Aa~LHdIG~~I~~~------------------~h~ 421 (582)
.|+.+|+.+|..|-..+ |+ ++.+... |.+||+|||||+..-+. .|.
T Consensus 169 ~Hs~~Va~la~~la~~l----gl-----------~~~~~~~~l~~aaLLHDIGk~~ip~~il~k~~~L~~~E~~~~~~H~ 233 (328)
T 3tm8_A 169 HHGVTVSTLSIALAQKL----GI-----------TDPKKTQLLTLGALLHDYGHHHSPLNLNQPLDSMSPEDLALWKKHP 233 (328)
T ss_dssp HHHHHHHHHHHHHHHHH----TC-----------CCHHHHHHHHHHHHHTTGGGTTCSCCCSSCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHc----Cc-----------CHHHHHHHHHHHHHHhcCCcccCCHHHHhCCCCCCHHHHHHHHHHH
Confidence 79999999999865443 43 4455566 99999999999874332 388
Q ss_pred hhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcCCCCCCCchhhcCCCHHHHHHHHHHHHHHHHHHHhcc
Q 007976 422 KQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQ 496 (582)
Q Consensus 422 kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~ 496 (582)
..++.+++.. .|++ . .++.+++||........ ...|..++ +-.++.|+.+|+.+|.
T Consensus 234 ~~G~~~ll~~---~~~~----~------~v~~~i~~HHEr~dGsG---P~gl~g~~---I~~~arIv~vaD~~da 289 (328)
T 3tm8_A 234 IEGAQKVQDK---KHFD----Q------TVINIIGQHEETINGTG---PKGLREKD---MDPLAVLVSSANAMDR 289 (328)
T ss_dssp HHHHHHHTTC---TTSC----H------HHHHHHHHTTCCTBSCS---TTCCBGGG---SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---CCCc----H------HHHHHHHHhcCCCCCCC---CCCCCccc---CCHHHHHHHHHHHHHH
Confidence 8888855554 2565 3 56678888875443322 12333332 3446788888887774
No 17
>2o08_A BH1327 protein; putative HD superfamily hydrolase, structural genomics, JOIN for structural genomics, JCSG; HET: UNL PG4 DGI; 1.90A {Bacillus halodurans}
Probab=96.89 E-value=0.0024 Score=60.22 Aligned_cols=93 Identities=17% Similarity=0.224 Sum_probs=61.7
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccC----------------------CC
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS----------------------KK 418 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~----------------------~~ 418 (582)
.|+..|+.+|..| +..+|+ ++ ..+..|++|||||+... ..
T Consensus 21 ~Hs~~Va~~A~~l----A~~~g~-----------~~---~~~~~agLLHDIGk~~~~~~il~~~~~~~~~l~~~e~~~~~ 82 (188)
T 2o08_A 21 QHTIGVMETAIDL----AKLYGA-----------DQ---QKAELAAIFHDYAKFRDKNEMRTLIREKLSQQDILFYGDEL 82 (188)
T ss_dssp HHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTSCHHHHHHHHHHHCSCCGGGGSCGGG
T ss_pred HHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHHcCCCCHHHHHHHHHhcCCCCCHHHHHHHh
Confidence 7999999999975 444443 22 34889999999999832 13
Q ss_pred CchhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcCCCCCCCchhhcCCCHHHHHHHHHHHHHHHHHHHhcccc
Q 007976 419 GYHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQND 498 (582)
Q Consensus 419 ~h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~s~ 498 (582)
.|...+++++... .|+++++ ++..++||....| . ...++.|+.+|+.++..|
T Consensus 83 ~H~~~G~~il~~~---~~~~~~~---------i~~aI~~Hh~g~~--------~--------~~~~~~Iv~vAD~i~~~r 134 (188)
T 2o08_A 83 LHAPCGAYYVREE---VGIEDED---------VLQAIRFHTTGRP--------N--------MSLLEKIIFLADYIEPNR 134 (188)
T ss_dssp SHHHHHHHHHHHH---HCCCCHH---------HHHHHHTTTTCCT--------T--------CCHHHHHHHHHHHHSTTC
T ss_pred hHHHHHHHHHHHc---cCCChHH---------HHHHHHHhccCCC--------C--------CCHHHHhhhhhccCCCCC
Confidence 4777778877663 3665444 2345667764222 1 123788999999987665
Q ss_pred C
Q 007976 499 C 499 (582)
Q Consensus 499 ~ 499 (582)
.
T Consensus 135 ~ 135 (188)
T 2o08_A 135 Q 135 (188)
T ss_dssp C
T ss_pred C
Confidence 4
No 18
>3ccg_A HD superfamily hydrolase; NP_347894.1, HD domain, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.50A {Clostridium acetobutylicum atcc 824}
Probab=96.86 E-value=0.0026 Score=60.14 Aligned_cols=93 Identities=13% Similarity=0.093 Sum_probs=62.1
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccCC-----------------------
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------- 417 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~~----------------------- 417 (582)
.|+..|+.+|..| +..+++ ++ ..+..|++|||||+...+
T Consensus 22 ~Hs~~Va~~A~~l----A~~~g~-----------d~---~~~~~AgLLHDiGk~~~~~~il~~~~~~~~~l~~~E~~~~~ 83 (190)
T 3ccg_A 22 KHSLGVMDTAVRL----AGIYNE-----------DT---EKARIAGLVHDCAKKLPGEKIIEICTNEGYELGDEDIRNSY 83 (190)
T ss_dssp HHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTSCHHHHHHHHHHTTCCCCHHHHTTTT
T ss_pred HHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHhcCCCCHHHHHHHHHHcCCCCCHHHHhHHH
Confidence 7999999999975 444443 22 348899999999987541
Q ss_pred CCchhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcCCCCCCCchhhcCCCHHHHHHHHHHHHHHHHHHHhccc
Q 007976 418 KGYHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQN 497 (582)
Q Consensus 418 ~~h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~s 497 (582)
..|...+++++.+. .|+++++ ++..++||....| .. ..++.|+.+|+.++..
T Consensus 84 ~~H~~~Ga~il~~~---~~~~~~~---------i~~aI~~Hh~g~~--------~~--------~~~~~Iv~vAD~i~~~ 135 (190)
T 3ccg_A 84 LLHGLAGRILAKKV---IGIDDED---------VLNAIEFHTTGRP--------NM--------SLLEKIIYIADYIEPG 135 (190)
T ss_dssp C-CHHHHHHHHHHT---TCCCCHH---------HHHHHHTTTTCCS--------SC--------CHHHHHHHHHHHHSTT
T ss_pred cchHHHHHHHHHHh---cCCCcHH---------HHHHHHHhcCCCC--------CC--------CHHHHHHHHHHhCCCC
Confidence 34777788887763 3775544 2345567765222 11 2377899999998766
Q ss_pred cC
Q 007976 498 DC 499 (582)
Q Consensus 498 ~~ 499 (582)
|.
T Consensus 136 R~ 137 (190)
T 3ccg_A 136 RE 137 (190)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 19
>2ogi_A Hypothetical protein SAG1661; structural genomics, joint center for structural genomics, J protein structure initiative; HET: GDP MES; 1.85A {Streptococcus agalactiae serogroup V}
Probab=96.63 E-value=0.0036 Score=59.49 Aligned_cols=94 Identities=15% Similarity=0.046 Sum_probs=61.9
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccCC----------------------
Q 007976 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK---------------------- 417 (582)
Q Consensus 360 ~~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~~---------------------- 417 (582)
..|+..|+.+|..| +...|+ ++ ..+..|++|||||+...+
T Consensus 28 ~~Hs~~Va~~A~~l----A~~~g~-----------d~---~~~~~AgLLHDIGK~~~~~~il~~~~~~~~~l~~~E~~~~ 89 (196)
T 2ogi_A 28 FNHVLGVERAAIEL----AERYGY-----------DK---EKAGLAALLHDYAKELSDDEFLRLIDKYQPDPDLKKWGNN 89 (196)
T ss_dssp HHHHHHHHHHHHHH----HHHHTC-----------CH---HHHHHHHHHTTTTTTCCHHHHHHHHHHHCCCTGGGGSCHH
T ss_pred HHHHHHHHHHHHHH----HHHHCc-----------CH---HHHHHHHHHHHcCCcCCHHHHHHHHHhcCCCCCHHHHHHH
Confidence 37999999999975 444443 22 348899999999998431
Q ss_pred CCchhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcCCCCCCCchhhcCCCHHHHHHHHHHHHHHHHHHHhccc
Q 007976 418 KGYHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQN 497 (582)
Q Consensus 418 ~~h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~s 497 (582)
..|...+++++... .|+++++ ++..++||....| .. ..++.|+.+|+.++..
T Consensus 90 ~~H~~~G~~ll~~~---~~~~~~~---------i~~aI~~Hh~g~~--------~~--------~~~~~Iv~vAD~i~~~ 141 (196)
T 2ogi_A 90 IWHGLVGIYKIQED---LAIKDQD---------ILAAIAKHTVGSA--------QM--------STLDKIVYVADYIEHN 141 (196)
T ss_dssp HHHHHTHHHHHHHH---SCCCCHH---------HHHHHHTTTTCCS--------SC--------CHHHHHHHHHHHHCTT
T ss_pred hccHHHHHHHHHHc---cCCCcHH---------HHHHHHHhcCCCC--------CC--------CHHHHhhhhheecCCC
Confidence 23666777777663 3665544 2345567765222 11 2378899999998766
Q ss_pred cC
Q 007976 498 DC 499 (582)
Q Consensus 498 ~~ 499 (582)
|.
T Consensus 142 R~ 143 (196)
T 2ogi_A 142 RD 143 (196)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 20
>3b57_A LIN1889 protein; Q92AN1, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 3.00A {Listeria innocua CLIP11262} SCOP: a.211.1.1
Probab=96.63 E-value=0.0076 Score=57.82 Aligned_cols=77 Identities=17% Similarity=0.123 Sum_probs=47.7
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCH
Q 007976 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYST 439 (582)
Q Consensus 360 ~~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~~~~h~kHS~yiI~ns~~l~G~s~ 439 (582)
..|..+|.++|..|-... + .+..++.+||+|||||......+ +..|+.++..--.=.|++.
T Consensus 27 ~~H~~rV~~~a~~ia~~~----~--------------~d~~~v~~AAlLHDig~~~~~~~-~~~~a~~a~~~L~~~g~~~ 87 (209)
T 3b57_A 27 WSHIKRVWKLSKEIQSKE----G--------------GDLFTIELAALFHDYSDIKLTTD-EQEATKTLINWMETKEIPS 87 (209)
T ss_dssp HHHHHHHHHHHHHHHHHH----C--------------SCHHHHHHHHHHTTCCC--------CHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHhccCcccCCCc-hHHHHHHHHHHHHHCCCCH
Confidence 489999999999864322 2 12478999999999998754443 2234444322100148999
Q ss_pred HHHhhhhhHHHHHHHHHhhcCC
Q 007976 440 DEIKHLVCLQLIALLTRFHRKK 461 (582)
Q Consensus 440 ~E~~~~~~~~~iA~iaryhrk~ 461 (582)
.+.. .|..++..|+.+
T Consensus 88 ~~~~------~V~~~I~~Hs~~ 103 (209)
T 3b57_A 88 ELIK------KIIRIIQSVSFK 103 (209)
T ss_dssp HHHH------HHHHHHHHHC--
T ss_pred HHHH------HHHHHHHHcCcc
Confidence 9888 788888888654
No 21
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=96.59 E-value=0.012 Score=62.37 Aligned_cols=99 Identities=12% Similarity=0.069 Sum_probs=62.8
Q ss_pred cCCCCccEEEEEehh-hhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhc--cCCCCCCceEEEEeCCCceEEE
Q 007976 82 HNISRDHTRAVATAA-VRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQ--FLPVFDRLVLSVDIGGGSTEFV 158 (582)
Q Consensus 82 ~~v~~~~i~~vATsA-~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~--~l~~~~~~~lviDIGGGStEl~ 158 (582)
.++++....+|-|.. .-...+++.+.+.+.+..|++.--+-- |+.+..++... .++.....++|+|+|||.|.++
T Consensus 101 L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~--ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~ 178 (418)
T 1k8k_A 101 LRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAV--QAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVI 178 (418)
T ss_dssp TCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEE--HHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEE
T ss_pred cCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEec--hHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEE
Confidence 455544444555543 333345556667666888998554432 23333333211 2221223689999999999999
Q ss_pred EeeCCeEEEE--EEEechHHHHHHhh
Q 007976 159 IGKRGKVVFC--ESVNLGHVSLSEKF 182 (582)
Q Consensus 159 ~~~~~~~~~~--~SlplG~vrl~e~f 182 (582)
.+.+|.+... ..+++|.-.+++.+
T Consensus 179 ~v~~G~~~~~~~~~~~lGG~~lt~~l 204 (418)
T 1k8k_A 179 PVAEGYVIGSCIKHIPIAGRDITYFI 204 (418)
T ss_dssp EEETTEECGGGCEEESCSHHHHHHHH
T ss_pred EeECCEEcccceEEEeCcHHHHHHHH
Confidence 9999988876 88999998888754
No 22
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=96.58 E-value=0.0072 Score=65.32 Aligned_cols=77 Identities=17% Similarity=0.172 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEechHHHHHHhh
Q 007976 103 KDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (582)
Q Consensus 103 ~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (582)
-+.+.+.+++.+|++++|=. -|++-+-+|++..-. .+-...++|||||||.+++|.+|.+.++.++|+|.-.+|...
T Consensus 370 m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE-~eLGvaiIDmGGGTTd~sVf~~G~lv~a~~ip~gG~~VT~DI 446 (610)
T 2d0o_A 370 MAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPG-TTRPLAILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMII 446 (610)
T ss_dssp HHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECTTCCEEEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHH
Confidence 46688889888899888766 788888888876533 234589999999999999999999999999999999988754
No 23
>2qgs_A Protein Se1688; alpha-helical protein, structural genomics, PSI-2, protein S initiative, northeast structural genomics consortium; 2.00A {Staphylococcus epidermidis} SCOP: a.211.1.1
Probab=96.55 E-value=0.012 Score=57.12 Aligned_cols=75 Identities=11% Similarity=0.054 Sum_probs=49.3
Q ss_pred chhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccCCCCchhhhHHH---HHcCCCCCC
Q 007976 360 VKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHI---IMNGDHLYG 436 (582)
Q Consensus 360 ~~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~~~~h~kHS~yi---I~ns~~l~G 436 (582)
..|..+|.++|..|. ....+. +..++.+||+|||||..... +...|..+ ++.. .|
T Consensus 27 ~~H~~rV~~~a~~i~---a~~~~~--------------d~~~l~lAAlLHDigk~~~~--~~~~ga~~a~~~L~~---~g 84 (225)
T 2qgs_A 27 IAHVERVYNNACYIA---KRENIT--------------DTLVIELSSLLHDTVDSKLT--DEILAYDQLKQFLST---LD 84 (225)
T ss_dssp HHHHHHHHHHHHHHH---HHTTCS--------------CCHHHHHHHHHTTTTCCSSS--CHHHHHHHHHHHHHT---TT
T ss_pred HHHHHHHHHHHHHHH---hhccCC--------------CHHHHHHHHHHHcCCCCCCC--cHHHHHHHHHHHHHH---CC
Confidence 379999999998752 222221 23689999999999984322 34444433 3333 49
Q ss_pred CCHHHHhhhhhHHHHHHHHHhhcCCC
Q 007976 437 YSTDEIKHLVCLQLIALLTRFHRKKF 462 (582)
Q Consensus 437 ~s~~E~~~~~~~~~iA~iaryhrk~~ 462 (582)
++.+++. .|..++++|+...
T Consensus 85 ~~~~~i~------~V~~~I~~Hs~~~ 104 (225)
T 2qgs_A 85 LSSEISQ------QVLYIIKHMSYRA 104 (225)
T ss_dssp CCHHHHH------HHHHHHHTTC---
T ss_pred CCHHHHH------HHHHHHHHcCccc
Confidence 9999998 8888888887543
No 24
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=96.51 E-value=0.0078 Score=65.23 Aligned_cols=76 Identities=18% Similarity=0.112 Sum_probs=64.0
Q ss_pred HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEechHHHHHHhh
Q 007976 104 DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEKF 182 (582)
Q Consensus 104 ~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~f 182 (582)
..+.+.+++.+|++++|=. -|++-+-+|++..-. .+-...++|+|||||.+++|.+|.+.++.++|+|.-.+|...
T Consensus 373 ~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE-~elGvaiIDmGgGTTd~sVf~~g~lv~a~~ip~gG~~VT~DI 448 (607)
T 1nbw_A 373 QVIARELSARLQTEVVVGG--VEANMAIAGALTTPG-CAAPLAILDLGAGSTDAAIVNAEGQITAVHLAGAGNMVSLLI 448 (607)
T ss_dssp CCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTT-CCSSEEEEEECSSEEEEEEECSSSCEEEEEEECCHHHHHHHH
T ss_pred HHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCC-CcCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHH
Confidence 4478888888899888866 888888888876533 234589999999999999999999999999999999988754
No 25
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=96.45 E-value=0.019 Score=59.85 Aligned_cols=93 Identities=15% Similarity=0.157 Sum_probs=61.8
Q ss_pred HcCCCCccEEEEEehh-hhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEE
Q 007976 81 SHNISRDHTRAVATAA-VRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (582)
Q Consensus 81 ~~~v~~~~i~~vATsA-~R~A~N~~~fl~~I~~~tG~~i-~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~ 158 (582)
.+++++.+..++-|.. .-...+++.+.+.+.+..|++. .++. |+-++.+|.- . ..++|+|+|||.|.++
T Consensus 93 ~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~---e~~aaa~a~g--~----~~~lVvDiG~gtt~v~ 163 (375)
T 2fxu_A 93 ELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAI---QAVLSLYASG--R----TTGIVLDSGDGVTHNV 163 (375)
T ss_dssp TSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEE---HHHHHHHHTT--C----SSEEEEEECSSCEEEE
T ss_pred hcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEcc---chheeeeecC--C----CeEEEEEcCCCceEEe
Confidence 3466544434455543 3333455667777777789874 4444 4444444421 1 3589999999999999
Q ss_pred EeeCCeEEE--EEEEechHHHHHHhh
Q 007976 159 IGKRGKVVF--CESVNLGHVSLSEKF 182 (582)
Q Consensus 159 ~~~~~~~~~--~~SlplG~vrl~e~f 182 (582)
.+.+|.+.. ..++|+|.-.+++.+
T Consensus 164 ~v~~G~~~~~~~~~~~~GG~~lt~~l 189 (375)
T 2fxu_A 164 PIYEGYALPHAIMRLDLAGRDLTDYL 189 (375)
T ss_dssp EEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EeECCEEeccceEEeccCHHHHHHHH
Confidence 999998776 578999998887754
No 26
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=96.38 E-value=0.046 Score=56.95 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEE
Q 007976 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSV 148 (582)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lvi 148 (582)
..|+..++.++.+ +.+..++ +++.-|.=...+++.+.+. -+..|+++-.+--|=+|-..+.|.... ..+...+|+
T Consensus 136 ~~l~~l~~~a~~~~~~~~~~~-vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~vlV~ 211 (394)
T 3qfu_A 136 MILGKMKQIAEDYLGTKVTHA-VVTVPAYFNDAQRQATKDA-GTIAGLNVLRIVNEPTAAAIAYGLDKS--DKEHQIIVY 211 (394)
T ss_dssp HHHHHHHHHHHHHHTSCCCEE-EEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHTTTTSC--SSCEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcceE-EEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHHHHhhccC--CCCceEEEE
Confidence 3455666666554 4332222 2332222222223344444 467899965444444444444443321 123457999
Q ss_pred EeCCCceEEEEee--CCeEE---EEEEEechHHHHHHhh
Q 007976 149 DIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (582)
Q Consensus 149 DIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (582)
|+|||+|.+++++ ++.+. ...+.++|.-.+.+.+
T Consensus 212 D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l 250 (394)
T 3qfu_A 212 DLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKI 250 (394)
T ss_dssp EECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHH
Confidence 9999999999876 33322 1445789988887654
No 27
>3dto_A BH2835 protein; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Bacillus halodurans} SCOP: a.211.1.1
Probab=96.38 E-value=0.012 Score=57.19 Aligned_cols=75 Identities=17% Similarity=0.068 Sum_probs=48.3
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccCCCCchhhhHHHH---HcCCCCC
Q 007976 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHII---MNGDHLY 435 (582)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~~~~h~kHS~yiI---~ns~~l~ 435 (582)
+..|..+|.++|..|-... + .+..++.+||+|||||..- +..|..-++-++ +.. .
T Consensus 26 ~~~H~~rV~~~a~~ia~~~----~--------------~d~~~l~~AalLHDig~~k-~~~~~~~ga~~a~~~L~~---~ 83 (223)
T 3dto_A 26 DWYHIRRVTLMAKAIGEQE----K--------------VDVFVVQIAALFHDLIDDK-LVDDPETAKQQLIDWMEA---A 83 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHT----T--------------CCHHHHHHHHHHHSTTC--------CHHHHHHHHHHHT---T
T ss_pred cHHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHhhccccc-cCCCHHHHHHHHHHHHHH---c
Confidence 3489999999999875421 2 1357899999999999753 333334444333 333 5
Q ss_pred CCCHHHHhhhhhHHHHHHHHHhhcCC
Q 007976 436 GYSTDEIKHLVCLQLIALLTRFHRKK 461 (582)
Q Consensus 436 G~s~~E~~~~~~~~~iA~iaryhrk~ 461 (582)
||+..+.. .|..++..|+.+
T Consensus 84 g~~~~~i~------~V~~~I~~Hs~~ 103 (223)
T 3dto_A 84 GVPSQKID------HTMDIINTISFK 103 (223)
T ss_dssp TCCHHHHH------HHHHHHHCC---
T ss_pred CCCHHHHH------HHHHHHHHcCCc
Confidence 99999999 888888888653
No 28
>2pjq_A Uncharacterized protein LP_2664; LPR71, NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Lactobacillus plantarum WCFS1} SCOP: a.211.1.1
Probab=96.23 E-value=0.0058 Score=59.66 Aligned_cols=75 Identities=12% Similarity=0.078 Sum_probs=48.4
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccCCCCchhhhHHHH---HcCCCCC
Q 007976 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHII---MNGDHLY 435 (582)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~~~~h~kHS~yiI---~ns~~l~ 435 (582)
+..|..+|.++|..|-... + .+..++.+||+|||||..- +..+...++.+. +.. .
T Consensus 31 ~~~H~~rV~~~a~~ia~~~----~--------------~d~~ll~lAAlLHDigk~k-~~~~~~~ga~~a~~~L~~---~ 88 (231)
T 2pjq_A 31 GRDHLQRVNRLARRLAKDE----G--------------ANLNLTLAAAWLHDVIDDK-LMANPAKAHQDLIVQLNA---Q 88 (231)
T ss_dssp SHHHHHHHHHHHHHHHHHH----T--------------CCHHHHHHHHHHHHHHC----------CHHHHHHHHHT---T
T ss_pred CHHHHHHHHHHHHHHHHHc----C--------------CCHHHHHHHHHHHcCCccc-CCChHHHHHHHHHHHHHH---C
Confidence 3479999999999864332 2 1247899999999999842 333323333332 222 4
Q ss_pred CCCHHHHhhhhhHHHHHHHHHhhcCC
Q 007976 436 GYSTDEIKHLVCLQLIALLTRFHRKK 461 (582)
Q Consensus 436 G~s~~E~~~~~~~~~iA~iaryhrk~ 461 (582)
||+..+.. .|..++..|+..
T Consensus 89 g~~~~~~~------~V~~~I~~Hs~~ 108 (231)
T 2pjq_A 89 NVTADDQT------AIFAIIDHMSFS 108 (231)
T ss_dssp TCCHHHHH------HHHHHHTSCCTG
T ss_pred CCCHHHHH------HHHHHHHHcCCc
Confidence 89999999 888888888654
No 29
>3djb_A Hydrolase, HD family; all alpha-helical protein., structural genomics, PSI-2, protein structure initiative; 2.90A {Bacillus thuringiensis serovarkonkukian} SCOP: a.211.1.1
Probab=95.87 E-value=0.014 Score=56.68 Aligned_cols=78 Identities=13% Similarity=0.027 Sum_probs=51.6
Q ss_pred cchhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCC
Q 007976 359 RVKAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYS 438 (582)
Q Consensus 359 ~~~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~~~~h~kHS~yiI~ns~~l~G~s 438 (582)
+..|..+|.++|..|-. ..+ .+..++.+||+|||||.. -+.+|..-++-++..--.-.||+
T Consensus 26 ~~~H~~rV~~~a~~ia~----~~~--------------~d~~~l~~AAlLHDig~~-k~~~h~~~ga~~a~~~L~~~g~~ 86 (223)
T 3djb_A 26 DWYHIRRVHKMAISLSE----QEG--------------GNRFIIEMAALLHDVADE-KLNESEEAGMKKVSDWLEELHVE 86 (223)
T ss_dssp THHHHHHHHHHHHHHHT----TTC--------------SCHHHHHHHHTTHHHHC---CCSSSTTTHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHHHHHHHHH----HcC--------------CCHHHHHHHHHHhhcccc-ccCCcHHHHHHHHHHHHHHCCCC
Confidence 44899999999998632 212 235799999999999984 34445555543332210014999
Q ss_pred HHHHhhhhhHHHHHHHHHhhcCC
Q 007976 439 TDEIKHLVCLQLIALLTRFHRKK 461 (582)
Q Consensus 439 ~~E~~~~~~~~~iA~iaryhrk~ 461 (582)
..+.. .|..+++.|+.+
T Consensus 87 ~~~i~------~V~~~I~~Hs~~ 103 (223)
T 3djb_A 87 EEESK------HVLHIIANMSYK 103 (223)
T ss_dssp HHHHH------HHHHHTTCCC--
T ss_pred HHHHH------HHHHHHHHhCCc
Confidence 99999 889999888753
No 30
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=95.78 E-value=0.15 Score=55.31 Aligned_cols=107 Identities=17% Similarity=0.262 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceEE
Q 007976 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVLS 147 (582)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~I~~~tG~~i~-VIsgeEEA~l~~~gv~~~l~~~~~~~lv 147 (582)
..|+..++.++++ +.+..++ +++--|.=....++...+ +-+..|+++- +++...=|-+.| |.-.. .+...+|
T Consensus 92 ~~L~~l~~~ae~~l~~~~~~~-VitvPa~~~~~qr~a~~~-a~~~AGl~~~~li~Ep~AAAlay-~~~~~---~~~~vlV 165 (509)
T 2v7y_A 92 IILQYLKSYAEDYLGEPVTRA-VITVPAYFNDAQRQATKD-AGRIAGLEVERIINEPTAAALAY-GLDKE---EDQTILV 165 (509)
T ss_dssp HHHHHHHHHHHHHHTSCCCEE-EEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHT-TGGGS---CSEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCeE-EEEECCCCCHHHHHHHHH-HHHHcCCCeEEEecCHHHHHHHH-hhccC---CCCEEEE
Confidence 4466666655553 4322222 232222111112334444 4466899865 555444444433 43321 2456899
Q ss_pred EEeCCCceEEEEee--CCeEE---EEEEEechHHHHHHhh
Q 007976 148 VDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (582)
Q Consensus 148 iDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (582)
+|+|||+|.+++++ +|.+. ...+.++|.-.+.+.+
T Consensus 166 ~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l 205 (509)
T 2v7y_A 166 YDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVI 205 (509)
T ss_dssp EEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHH
Confidence 99999999999877 45432 1345688887777654
No 31
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=95.74 E-value=0.13 Score=56.50 Aligned_cols=107 Identities=21% Similarity=0.290 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHc-CCCCccEEEEEe-hhhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceE
Q 007976 70 ESLLMFRDIIQSH-NISRDHTRAVAT-AAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (582)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vAT-sA~R~A~N~~~fl~~I~~~tG~~i~-VIsgeEEA~l~~~gv~~~l~~~~~~~l 146 (582)
..|+..++.++.+ |-+.. .+|-| -|.=....++.+.+ +-+..|+++- +++...-|-+.| |.-...+ .+...+
T Consensus 122 ~~L~~lk~~ae~~lg~~v~--~~VitVPa~f~~~qr~a~~~-A~~~AGl~~~~li~EP~AAAlay-~~~~~~~-~~~~vl 196 (554)
T 1yuw_A 122 MVLTKMKEIAEAYLGKTVT--NAVVTVPAYFNDSQRQATKD-AGTIAGLNVLRIINEPTAAAIAY-GLDKKVG-AERNVL 196 (554)
T ss_dssp HHHHHHHHHHHHHHSSCCC--EEEEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHT-TCSTTCS-SCEEEE
T ss_pred HHHHHHHHHHHHHhCCCCC--eEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEeCcHHHHHHHH-HhhccCC-CCcEEE
Confidence 4466666655554 43222 23333 11111111233444 4556799864 566555554444 4322211 235689
Q ss_pred EEEeCCCceEEEEee--CCeEE---EEEEEechHHHHHHh
Q 007976 147 SVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEK 181 (582)
Q Consensus 147 viDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~ 181 (582)
|+|+|||+|.+++++ +|.+. ...+.++|.-.+.+.
T Consensus 197 V~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~ 236 (554)
T 1yuw_A 197 IFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNR 236 (554)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred EEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHH
Confidence 999999999999887 66553 445568888766654
No 32
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=95.65 E-value=0.1 Score=53.34 Aligned_cols=76 Identities=20% Similarity=0.243 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEechHHHHHHh
Q 007976 103 KDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHVSLSEK 181 (582)
Q Consensus 103 ~~~fl~~I~~~tG~~i~-VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~vrl~e~ 181 (582)
++.+.+ +-+..|+++- +++...=|-+.| |.- .. .+...+|+|+|||+|.++.+..+.+....++++|.-.+++.
T Consensus 111 r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~-~~~--~~-~~~~~lVvDiGggttdvsv~~~~~~~~~~~~~lGG~~id~~ 185 (344)
T 1jce_A 111 RRAILD-AGLEAGASKVFLIEEPMAAAIGS-NLN--VE-EPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHH-HHHHTTCSEEEEEEHHHHHHHHT-TCC--TT-SSSCEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHH
T ss_pred HHHHHH-HHHHcCCCeEeccCCHHHHHHhc-CCC--CC-CCceEEEEEeCCCeEEEEEEEcCCEEeeCCCCccChhHHHH
Confidence 344444 5567899864 555444444433 321 11 23568999999999999999999999999999999888875
Q ss_pred hc
Q 007976 182 FG 183 (582)
Q Consensus 182 f~ 183 (582)
+.
T Consensus 186 l~ 187 (344)
T 1jce_A 186 IV 187 (344)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 33
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=95.28 E-value=0.35 Score=48.94 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=59.1
Q ss_pred CCCCccEEEEEehhhh---h---cCChHHHHHHHHHHc-------C-----CcEEEeChHHHHHHHHhhhhccCCCCCCc
Q 007976 83 NISRDHTRAVATAAVR---A---AENKDEFVECVREKV-------G-----FEVDVLTGEQEAKFVYMGVLQFLPVFDRL 144 (582)
Q Consensus 83 ~v~~~~i~~vATsA~R---~---A~N~~~fl~~I~~~t-------G-----~~i~VIsgeEEA~l~~~gv~~~l~~~~~~ 144 (582)
+.+...+.+|.+--+. . .+|.+.+-++.+... | -+++++...-=|.+.+. .... .+..
T Consensus 90 ~~~~~~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e~~aa~~~~~---~~~~-~~~~ 165 (320)
T 2zgy_A 90 GLPVSEVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPESIPAGYEVL---QELD-ELDS 165 (320)
T ss_dssp SCCSCEEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEESSHHHHHHHH---HHSC-TTCE
T ss_pred CCCCceEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecCcHHHHHhhh---cccc-CCCC
Confidence 4433346666654444 2 235666666543211 1 14556665555555443 2222 2346
Q ss_pred eEEEEeCCCceEEEEeeCCeE-EE--EEEEechHHHHHHhh
Q 007976 145 VLSVDIGGGSTEFVIGKRGKV-VF--CESVNLGHVSLSEKF 182 (582)
Q Consensus 145 ~lviDIGGGStEl~~~~~~~~-~~--~~SlplG~vrl~e~f 182 (582)
.+++|||||.|+++++++|.+ .. +.+.++|.-.+++..
T Consensus 166 ~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I 206 (320)
T 2zgy_A 166 LLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAV 206 (320)
T ss_dssp EEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHH
T ss_pred EEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHH
Confidence 899999999999999998865 33 578999998888753
No 34
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.02 E-value=0.38 Score=48.48 Aligned_cols=140 Identities=16% Similarity=0.149 Sum_probs=86.5
Q ss_pred ccccccCCCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 007976 4 NTSYMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHN 83 (582)
Q Consensus 4 ~~~~~~~~~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~ 83 (582)
|||+ .++..||+|..++++.+++. +|. ++.+.+.++... . =.++.++...++++++. ++.+
T Consensus 2 ~~m~-----~~~lgiDiggt~~~~~l~d~--~g~--il~~~~~~~~~~----~---~~~~~~~~l~~~i~~~~---~~~~ 62 (326)
T 2qm1_A 2 NAMD-----KKIIGIDLGGTTIKFAILTT--DGV--VQQKWSIETNIL----E---DGKHIVPSIIESIRHRI---DLYN 62 (326)
T ss_dssp CGGG-----CEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECCCT----T---TTTTHHHHHHHHHHHHH---HHTT
T ss_pred CCcc-----cEEEEEEECCCEEEEEEECC--CCC--EEEEEEEcCCCC----C---CHHHHHHHHHHHHHHHH---HHcC
Confidence 6775 46789999999999999975 354 454444332210 1 12455666666666664 3455
Q ss_pred CCCccEEE--EEehhhhh--------cCC----hH-HHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceE
Q 007976 84 ISRDHTRA--VATAAVRA--------AEN----KD-EFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVL 146 (582)
Q Consensus 84 v~~~~i~~--vATsA~R~--------A~N----~~-~fl~~I~~~tG~~i~VIsgeEEA~l~~--~gv~~~l~~~~~~~l 146 (582)
++..++.. ++....-+ +.| .- .+.+.+++.+|++|.+.+.-.=+-+.- .|... ..++.+
T Consensus 63 ~~~~~i~~igi~~pG~vd~~~g~v~~~~~l~w~~~~~l~~~l~~~~~~pv~v~ND~~aaa~~e~~~g~~~----~~~~~~ 138 (326)
T 2qm1_A 63 MKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNWTTVQPVKEQIESALGIPFALDNDANVAALGERWKGAGE----NNPDVI 138 (326)
T ss_dssp CCGGGEEEEEEEESSEEETTTTEEECBGGGTBCSCBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSCEE
T ss_pred CCccceeEEEEecccceeCCCCEEEecCCCCccCCchHHHHHHHHhCCCEEEecHHHHHHHHHHHhCCCC----CCCcEE
Confidence 54344543 44554322 212 12 667888899999999887655544442 22211 234589
Q ss_pred EEEeCCCceEEEEeeCCeEEE
Q 007976 147 SVDIGGGSTEFVIGKRGKVVF 167 (582)
Q Consensus 147 viDIGGGStEl~~~~~~~~~~ 167 (582)
++-+|.| +-..+..+|++..
T Consensus 139 ~l~~GtG-iG~giv~~G~l~~ 158 (326)
T 2qm1_A 139 FITLGTG-VGGGIVAAGKLLH 158 (326)
T ss_dssp EEEESSS-EEEEEEETTEECC
T ss_pred EEEECCc-eEEEEEECCEEee
Confidence 9999999 6677777888764
No 35
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=94.65 E-value=0.046 Score=56.46 Aligned_cols=62 Identities=11% Similarity=0.053 Sum_probs=44.0
Q ss_pred cEEEeChHHHHHHHHhhhhccCCC--CCCceEEEEeCCCceEEEEee--CCeEEE--EEEEechHHHHHHh
Q 007976 117 EVDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTEFVIGK--RGKVVF--CESVNLGHVSLSEK 181 (582)
Q Consensus 117 ~i~VIsgeEEA~l~~~gv~~~l~~--~~~~~lviDIGGGStEl~~~~--~~~~~~--~~SlplG~vrl~e~ 181 (582)
++++++..-=|.+.|+ ...+. ++...+|+|||||.|++++++ +|.+.. +.++++|.-.+.+.
T Consensus 165 ~v~li~Ep~AAa~~~l---~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~ 232 (346)
T 2fsj_A 165 RLIMRPQGVGAALYLL---NQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISA 232 (346)
T ss_dssp EEEEEETTHHHHHHHH---HHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHH
T ss_pred EEEEEccHHHHHHHhh---ccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHH
Confidence 3667777766666663 22211 224469999999999999999 776666 58999998766553
No 36
>3gw7_A Uncharacterized protein YEDJ; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 3.30A {Escherichia coli k-12}
Probab=94.38 E-value=0.013 Score=57.36 Aligned_cols=76 Identities=12% Similarity=0.169 Sum_probs=49.3
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccCC----CCchhhhHHHH---HcCCC
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----KGYHKQSCHII---MNGDH 433 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~~----~~h~kHS~yiI---~ns~~ 433 (582)
.|..+|.++|..| ....+ .+..++.+||+|||||..-.+ ..|..-|+-++ +...
T Consensus 28 ~H~~rV~~~a~~i----a~~~~--------------~d~~~~~~AalLHDig~~~~~~~~~~~H~~~ga~~A~~~L~~~- 88 (239)
T 3gw7_A 28 CHFRRVWATAQKL----AADDD--------------VDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREE- 88 (239)
T ss_dssp CHHHHHHHHHHHH----TTTSC--------------SCTTHHHHHHHHTTTTC--------CCSSHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHH----HHHcC--------------CCHHHHHHHHHHhhcccccccCCccccHHHHHHHHHHHHHHhc-
Confidence 7999999999875 33222 123689999999999986322 12334444333 2332
Q ss_pred CCCCCHHHHhhhhhHHHHHHHHHhhcCC
Q 007976 434 LYGYSTDEIKHLVCLQLIALLTRFHRKK 461 (582)
Q Consensus 434 l~G~s~~E~~~~~~~~~iA~iaryhrk~ 461 (582)
+.||+..+.. .|..+++.|+.+
T Consensus 89 ~~g~~~e~i~------~V~~~I~~Hs~~ 110 (239)
T 3gw7_A 89 FEQFPAEKIE------AVCHAIAAHSFS 110 (239)
T ss_dssp TTSSCTTTTT------STTTGGGSSCTT
T ss_pred cCCcCHHHHH------HHHHHHHHcCCC
Confidence 3699999988 777777888754
No 37
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=94.34 E-value=0.2 Score=54.23 Aligned_cols=151 Identities=13% Similarity=0.084 Sum_probs=88.7
Q ss_pred EEEEEecccceEEEEEEEeCCCCEE-----EEEeee----eeeeeccC-C------------CcCCCCC-HHHHHHHHHH
Q 007976 15 FASIDMGTSSFKLLIIRAYPNGKFL-----TIDTLK----QPVILGRD-L------------SSSCSIS-TQSQARSVES 71 (582)
Q Consensus 15 ~AvIDIGSNSiRL~I~e~~~~~~~~-----~l~~~k----~~vrLg~g-~------------~~~g~Ls-~e~i~r~~~~ 71 (582)
.-|||+||.++|.-.+. ++..+ ++-+.+ ...-.|.. . .++|.|. -+.+++.++-
T Consensus 25 ~iVID~GS~~~kaG~ag---~~~P~~v~PSvVg~~~~~~~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~iw~~ 101 (498)
T 3qb0_A 25 AVVIDPGSYTTNIGYSG---SDFPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQW 101 (498)
T ss_dssp CEEEECCSSEEEEEETT---CSSCSEEEESEEEEESSCSSCCEECCTTGGGSCCTTEEEEESEETTEESCHHHHHHHHHH
T ss_pred eEEEECCCcEEEEEECC---CCCeeeecCceeEEeccCCCccEEEecHHHhcCcCceEEeccCcCCEEccHHHHHHHHHH
Confidence 35899999999986552 22211 222211 12234442 1 1345554 3566554443
Q ss_pred HHHHHHHHHHcCCCCccE-EEEEehhhhh-cCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCceEEE
Q 007976 72 LLMFRDIIQSHNISRDHT-RAVATAAVRA-AENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVLSV 148 (582)
Q Consensus 72 L~~f~~~~~~~~v~~~~i-~~vATsA~R~-A~N~~~fl~~I~~~tG~~i-~VIsgeEEA~l~~~gv~~~l~~~~~~~lvi 148 (582)
+ |. +..++.+.+- .++-|++.-. -.|++.+.+.+.+..|++- -++. ++-++.+|. +. ..++||
T Consensus 102 ~--f~---~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~---~~vlalya~--G~----~tglVV 167 (498)
T 3qb0_A 102 A--LQ---NELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAP---TSTCVSFAA--GR----PNCLVV 167 (498)
T ss_dssp H--HH---HTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEE---HHHHHHHHH--TC----SSEEEE
T ss_pred H--HH---hhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecc---hHHHHHHHc--CC----CeEEEE
Confidence 2 22 2345643222 4566655433 2366677777777788873 3443 444544443 22 237999
Q ss_pred EeCCCceEEEEeeCCeEE--EEEEEechHHHHHHhh
Q 007976 149 DIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (582)
Q Consensus 149 DIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (582)
|+|+|.|+++.+-+|.+. ...++++|.-.+++.+
T Consensus 168 DiG~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L 203 (498)
T 3qb0_A 168 DIGHDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLI 203 (498)
T ss_dssp EECSSCEEEEEEETTEECGGGCEEESCSHHHHHHHH
T ss_pred EcCCCcEEEEEEeCCEEccccceeccccHHHHHHHH
Confidence 999999999999898887 3578999998888754
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=94.12 E-value=0.46 Score=47.08 Aligned_cols=115 Identities=16% Similarity=0.237 Sum_probs=63.4
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEE-EE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-AV 92 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~-~v 92 (582)
++..||+||.+++.++++ .+| +++.....+.. + . ..+++.++ +++..+ .+++..++. +.
T Consensus 4 ~~lGiD~Gst~~k~~l~d--~~g--~i~~~~~~~~~---~-----~-~~~~~~~~---l~~l~~----~~~~~~~i~~i~ 63 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILK--DGK--EIVAKSLVAVG---T-----G-TSGPARSI---SEVLEN----AHMKKEDMAFTL 63 (270)
T ss_dssp EEEEEEECSSEEEEEEEE--TTT--EEEEEEEEECC---S-----S-CCHHHHHH---HHHHHH----HTCCGGGCSEEE
T ss_pred EEEEEEeccceEEEEEEe--CCC--CEEEEEEecCC---C-----C-HHHHHHHH---HHHHHH----cCCChhHEEEEE
Confidence 578999999999999995 345 35555433321 1 1 12444433 333322 133323444 34
Q ss_pred EehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 007976 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (582)
Q Consensus 93 ATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (582)
+|-.-|..-.. .+. .+++ |-+|. +.|+....+ +. ..++||||+.+.++.+++|++.
T Consensus 64 ~TG~g~~~~~~----------~~~--~~v~-Ei~ah--~~ga~~~~~--~~-~~vidiGGqd~k~i~~~~g~v~ 119 (270)
T 1hux_A 64 ATGYGRNSLEG----------IAD--KQMS-ELSCH--AMGASFIWP--NV-HTVIDIGGQDVKVIHVENGTMT 119 (270)
T ss_dssp EESTTTTTTTT----------TCS--EEEC-HHHHH--HHHHHHHCT--TC-CEEEEEETTEEEEEEEETTEEE
T ss_pred EeCccccchhh----------cCC--CCcc-cHHHH--HHHHHHhCC--CC-CEEEEECCCceEEEEEeCCcee
Confidence 55544432211 122 3333 33333 345544333 22 3789999999999999999875
No 39
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=93.91 E-value=0.056 Score=55.40 Aligned_cols=42 Identities=21% Similarity=0.185 Sum_probs=36.4
Q ss_pred CCceEEEEeCCCceEEEEeeCCeEE--EEEEEechHHHHHHhhc
Q 007976 142 DRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKFG 183 (582)
Q Consensus 142 ~~~~lviDIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f~ 183 (582)
+...+++|||||.|+++++.++.+. .+.|+|+|.-.+++...
T Consensus 171 ~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~ 214 (329)
T 4apw_A 171 NKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVG 214 (329)
T ss_dssp TCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHH
T ss_pred cCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHH
Confidence 4568999999999999999999998 45799999999988543
No 40
>2q14_A Phosphohydrolase; BT4208, HD domain, structural genomics, JO center for structural genomics, JCSG; HET: MSE ADP; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.84 E-value=0.088 Score=55.59 Aligned_cols=59 Identities=20% Similarity=0.206 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhccccc----------CCCCchhhhHHHHH
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT----------SKKGYHKQSCHIIM 429 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I----------~~~~h~kHS~yiI~ 429 (582)
.|+--|+.+|..+.+.+..... .+++.+..++++||+|||||..- ....|...|..++.
T Consensus 58 ~HSLgV~~la~~l~~~l~~~~~----------~~~~~d~~~~~~AaLlHDiGh~PfsH~~E~~~~~~~~He~~s~~ii~ 126 (410)
T 2q14_A 58 QHSLGAFYLMSEAITQLTSKGN----------FIFDSEAEAVQAAILLHDIGHGPFSHVLEDTIVQGVSHEEISLMLME 126 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC----------CCCHHHHHHHHHHHHHTTTTCCTTHHHHHTTTSTTCCHHHHHHHHHH
T ss_pred ehHHHHHHHHHHHHHHHHhcCC----------CCCHHHHHHHHHHHHHhccCCCccccccHHhhcCCCCHHHHHHHHHH
Confidence 7999999999999888764310 24556678999999999999731 13455555555554
No 41
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=93.59 E-value=0.38 Score=50.17 Aligned_cols=110 Identities=16% Similarity=0.231 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCC-CCCceE
Q 007976 70 ESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPV-FDRLVL 146 (582)
Q Consensus 70 ~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~I~~~tG~~i-~VIsgeEEA~l~~~gv~~~l~~-~~~~~l 146 (582)
..|+..++.++.+ +.+..+ .+++--|.=....++. +.++-+..|+++ .+++..+-|-+.| +.....+. .+...+
T Consensus 141 ~~L~~l~~~a~~~~~~~~~~-~vitvPa~~~~~~r~~-~~~a~~~AGl~~~~li~Ep~AAa~~~-~~~~~~~~~~~~~vl 217 (404)
T 3i33_A 141 MVLTKMKEIAEAYLGGKVHS-AVITVPAYFNDSQRQA-TKDAGTITGLNVLRIINEPTAAAIAY-GLDKKGCAGGEKNVL 217 (404)
T ss_dssp HHHHHHHHHHHHHHSSCCCE-EEEEECTTCCHHHHHH-HHHHHHHHTCEEEEEEEHHHHHHHHT-TTTSSCSSSSCCEEE
T ss_pred HHHHHHHHHHHHHhccCCCc-EEEEECCCCCHHHHHH-HHHHHHHcCCCeEEEeccHHHHHHHH-HhhcccccCCCceEE
Confidence 3455555555544 433222 2233222222222333 444456679985 4565555554443 43332221 235689
Q ss_pred EEEeCCCceEEEEee--CCeEE---EEEEEechHHHHHHhh
Q 007976 147 SVDIGGGSTEFVIGK--RGKVV---FCESVNLGHVSLSEKF 182 (582)
Q Consensus 147 viDIGGGStEl~~~~--~~~~~---~~~SlplG~vrl~e~f 182 (582)
|+|+|||+|.+++++ ++.+. ...+.++|.-.+.+.+
T Consensus 218 V~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l 258 (404)
T 3i33_A 218 IFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRM 258 (404)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHH
Confidence 999999999999875 44432 2344788887776654
No 42
>3hc1_A Uncharacterized HDOD domain protein; HDOD domain protein with unknown function, STRU genomics, joint center for structural genomics; 1.90A {Geobacter sulfurreducens}
Probab=93.28 E-value=0.12 Score=52.15 Aligned_cols=95 Identities=17% Similarity=0.074 Sum_probs=61.9
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccCC-----------------------
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK----------------------- 417 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~~----------------------- 417 (582)
.|+.+|+.+|..|- ...++ + +...+..|++|||||+..=+
T Consensus 121 ~hs~~va~~a~~la----~~~~~-----------~--~~~~~~~agllHDIGkl~l~~~~p~~~~~il~~~~~~~~~l~~ 183 (305)
T 3hc1_A 121 AHSLGVARIAKLIA----ERTGF-----------L--NPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITFGQ 183 (305)
T ss_dssp HHHHHHHHHHHHHH----HHTTC-----------S--CHHHHHHHHHTTTHHHHHHHHHSHHHHHHHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHHHH----HHcCC-----------C--CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 69999999998754 33332 1 23568899999999986522
Q ss_pred -------CCchhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcCCCCCCCchhhcCCCHHHHHHHHHHHHHHHH
Q 007976 418 -------KGYHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRL 490 (582)
Q Consensus 418 -------~~h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRl 490 (582)
..|..-+++++.+.+ ++ . .++.+++||....... . ....++.|+.+
T Consensus 184 ~E~~~~~~~H~~iG~~ll~~w~-lp-------~------~i~~~I~~HHe~~~~~---------~----~~~~~a~Iv~l 236 (305)
T 3hc1_A 184 AEERLFGTSHCEVGFALAKRWS-LN-------E------FICDTILYHHDIEAVP---------Y----KQAAIVAMVAF 236 (305)
T ss_dssp HHHHHHSSCHHHHHHHHHHHTT-CC-------H------HHHHHHHHTTCGGGCS---------S----SCCHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHcC-CC-------H------HHHHHHHHhCChhhcc---------c----cccHHHHHHHH
Confidence 267777777777654 33 2 4556667877522110 0 12247889999
Q ss_pred HHHhccccC
Q 007976 491 SVILQQNDC 499 (582)
Q Consensus 491 A~~Ld~s~~ 499 (582)
|+.++.-..
T Consensus 237 AD~~~~~~~ 245 (305)
T 3hc1_A 237 ADEYCTLRR 245 (305)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhC
Confidence 999987654
No 43
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=93.03 E-value=1.5 Score=43.82 Aligned_cols=130 Identities=12% Similarity=0.090 Sum_probs=79.0
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccE--
Q 007976 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHT-- 89 (582)
Q Consensus 12 ~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i-- 89 (582)
++++..||+|..++|+.+++. +|. ++.+.+.+. . .. ..+ .++.++...++++++. ++.+++..++
T Consensus 10 ~~~~lGiDiGgT~i~~~l~d~--~G~--il~~~~~~~-~--~~-~~~--~~~~~~~l~~~i~~~l---~~~~~~~~~i~~ 76 (305)
T 1zc6_A 10 IRYLIGVDGGGTGTRIRLHAS--DGT--PLAMAEGGA-S--AL-SQG--IAKSWQAVLSTLEAAF---QQAGLPAAPASA 76 (305)
T ss_dssp CCEEEEEEECSSCEEEEEEET--TCC--EEEEEEESC-C--CG-GGC--HHHHHHHHHHHHHHHH---HHTTCCCCCGGG
T ss_pred CCEEEEEEcCccceEEEEEcC--CCC--EEEEEeCCC-C--Cc-ccC--HHHHHHHHHHHHHHHH---HhcCCChhhhcc
Confidence 347889999999999999974 454 343332210 0 10 011 2456677777776664 3445544444
Q ss_pred --EEEEehhhhhcCChHHHHHHHHHHc--CCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeE
Q 007976 90 --RAVATAAVRAAENKDEFVECVREKV--GFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKV 165 (582)
Q Consensus 90 --~~vATsA~R~A~N~~~fl~~I~~~t--G~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~ 165 (582)
..++....-+..+... ++..+ +.++.|.+.-.=|.+. .. . ..+.+++=+|.|+.-..+..+|++
T Consensus 77 ~~igig~pG~v~~~~~~~----l~~~~~~~~pv~v~NDa~aaa~g---e~---~--~~~~v~v~~GTGigg~~i~~~G~~ 144 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGE----FESQAPGFARLSLATDGYTTLLG---AH---G--GQPGIIVALGTGSIGEALYPDGSH 144 (305)
T ss_dssp EEEEEEESCCCTTSHHHH----HHHTCCCCSEEEEECHHHHHHHH---HT---T--TSSEEEEEESSSEEEEEECTTSCE
T ss_pred ceEEEEecCCCchHHHHH----HHHhCCCCceEEEECCHHHHHHh---hc---C--CCCeEEEEecCCeEEEEEeCCCcE
Confidence 5778877755554332 56667 7899998866555443 21 1 245788999999865555546664
Q ss_pred E
Q 007976 166 V 166 (582)
Q Consensus 166 ~ 166 (582)
.
T Consensus 145 ~ 145 (305)
T 1zc6_A 145 R 145 (305)
T ss_dssp E
T ss_pred E
Confidence 3
No 44
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=92.51 E-value=0.11 Score=53.84 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=45.1
Q ss_pred cEEEeChHHHHHHHHhhhhccCC----CCCCceEEEEeCCCceEEEEeeCCeEE--EEEEEechHHHHHHhh
Q 007976 117 EVDVLTGEQEAKFVYMGVLQFLP----VFDRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (582)
Q Consensus 117 ~i~VIsgeEEA~l~~~gv~~~l~----~~~~~~lviDIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (582)
+|.|+...-=|.+.+. . ...+ ..+...+++|||||.|+++++.++.+. .+.|+++|.-.+.+..
T Consensus 156 ~V~v~pE~~~a~~~~~-~-~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i 225 (355)
T 3js6_A 156 GVKIVAQPMGTLLDLN-M-ENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRI 225 (355)
T ss_dssp EEEEEEHHHHHHHHTT-E-ETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred EEEEEeCcHHHHHHHH-H-ccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHH
Confidence 5666765555555432 1 1111 024568999999999999999999886 5779999999888754
No 45
>3u1n_A SAM domain and HD domain-containing protein 1; deoxynucleotide triphosphohydrolase, hydrolase; 3.10A {Homo sapiens}
Probab=92.27 E-value=0.26 Score=53.30 Aligned_cols=46 Identities=17% Similarity=0.299 Sum_probs=35.0
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccc
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF 414 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~ 414 (582)
.|+--|+.+|..+.+.|..... +. .+++.+..++++||+|||||..
T Consensus 68 ~HSLgV~~la~~i~~~l~~~~~----~~----~~~~~d~~~v~~AaLlHDiGH~ 113 (528)
T 3u1n_A 68 EHSLGVGYLAGCLVHALGEKQP----EL----QISERDVLCVQIAGLCHDLGHG 113 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCG----GG----CCCHHHHHHHHHHHHHTTTTCB
T ss_pred HHHHHHHHHHHHHHHHHHhhCc----cc----CCCHHHHHHHHHHHHHhccCCC
Confidence 7999999999999988874321 00 2345566899999999999964
No 46
>3irh_A HD domain protein; phosphohydrolase, dntpase, structural genomics, P protein structure initiative, midwest center for structural genomics; HET: DGT DTP; 2.40A {Enterococcus faecalis} PDB: 2o6i_A*
Probab=92.02 E-value=0.18 Score=53.85 Aligned_cols=67 Identities=18% Similarity=0.158 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccc--------cCCCCchhhhHHHHHc
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF--------TSKKGYHKQSCHIIMN 430 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~--------I~~~~h~kHS~yiI~n 430 (582)
.|+--|+.+|..+.+.|...+. .. ......+++.++.++++||+|||||.. +-..+|-..|..||.+
T Consensus 89 ~HSLgV~~la~~i~~~l~~~~~--~~-~~~~~~~~~~~~~~v~~AaLlHDIGH~PFsH~~E~~~~~~HE~~s~~ii~~ 163 (480)
T 3irh_A 89 SHSLGVYEITRRICEIFQRNYS--VE-RLGENGWNDDERLITLCAALLHDVGHGPYSHTFEHIFDTNHEAITVQIITS 163 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSB--HH-HHGGGSBCGGGHHHHHHHHHHTTTTCCTTHHHHHHHHCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHhhCc--cc-cccccCCCHHHHHHHHHHHHHhccCCCCccchhhhccCCCHHHHHHHHHHc
Confidence 7999999999999998864321 00 000002455677899999999999975 1134567777777765
No 47
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=91.81 E-value=4.5 Score=40.34 Aligned_cols=128 Identities=13% Similarity=0.105 Sum_probs=73.6
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEE
Q 007976 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (582)
Q Consensus 11 ~~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (582)
++.....|||||.++++++.+ ++++ ++. + +. .+.++++++.+ +.-.+ .+
T Consensus 18 ~~~~~iGIDiGsTt~K~V~~~---~~~i--~~~-~---------~~-----~~~~~~~l~~l-------~~~~~----~~ 66 (287)
T 2ews_A 18 GSHMKVGIDAGGTLIKIVQEQ---DNQR--TFK-T---------EL-----TKNIDQVVEWL-------NQQQI----EK 66 (287)
T ss_dssp ---CEEEEEECSSEEEEEEEC---SSCE--EEE-E---------EE-----GGGHHHHHHHH-------HTSCC----SE
T ss_pred CCCeEEEEEEChhhEEEEEEc---CCEE--EEE-E---------ec-----hHHHHHHHHHh-------cccCc----eE
Confidence 344679999999999999982 4433 222 1 11 11244443333 11122 25
Q ss_pred EEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCC---CCCceEEEEeCCCceEEEEeeCCeEEE
Q 007976 91 AVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPV---FDRLVLSVDIGGGSTEFVIGKRGKVVF 167 (582)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~---~~~~~lviDIGGGStEl~~~~~~~~~~ 167 (582)
+++|--=|. .+. +..|++...++ |-.-...|+..-.+. .-.+.+++|||||-. ++.++++....
T Consensus 67 i~~TG~G~~------~~~---~~l~~~~~~v~---Ei~~~~~Ga~~l~~~~~~~~~~~~vIdIGg~ds-ii~v~~~~f~r 133 (287)
T 2ews_A 67 LCLTGGNAG------VIA---ENINIPAQIFV---EFDAASQGLGILLKEQGHDLADYIFANVGTGTS-LHYFDGQSQRR 133 (287)
T ss_dssp EEEESTTHH------HHH---TTSSSCCEECC---HHHHHHHHHHHHHHHTTCCCSCEEEEEESSSEE-EEEECSSCEEE
T ss_pred EEEEChhHH------hHh---HhhCCCcceee---hhHHHHHHHHHhcccCCCCcCCeEEEEeCCCeE-EEEEcCCceEE
Confidence 677854332 111 14677766644 444444454432221 112469999999988 99998777776
Q ss_pred EEEEechHHHHHHhh
Q 007976 168 CESVNLGHVSLSEKF 182 (582)
Q Consensus 168 ~~SlplG~vrl~e~f 182 (582)
.---..|.-++-+..
T Consensus 134 ~~g~aaGgGtFl~l~ 148 (287)
T 2ews_A 134 VGGIGTGGGMIQGLG 148 (287)
T ss_dssp EEEESCSHHHHHHHH
T ss_pred cCccccchhhHHHHH
Confidence 767788988888754
No 48
>3sk9_A Putative uncharacterized protein TTHB187; crispr, CAS, HD domain, nuclease, hydrolase; 1.80A {Thermus thermophilus HB8} PDB: 3skd_A
Probab=91.73 E-value=0.21 Score=49.53 Aligned_cols=89 Identities=12% Similarity=-0.006 Sum_probs=57.8
Q ss_pred hhHHHHHHHHHHHHHHH--------HhcccccchhhhhhccCCcchHHHHHHHHHHhhccccc----CC-----------
Q 007976 361 KAGAQCASIAKDIFEGL--------RKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT----SK----------- 417 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L--------~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I----~~----------- 417 (582)
.|..-|+..|..|++.. ....|++. +..+.++.+++.|||||++- .+
T Consensus 28 ~HllDvAava~~L~~~~~~~~r~~la~~~g~~~----------~~~~~~~~~~~~lHDiGK~~~~fq~~~~~~~~~l~~~ 97 (265)
T 3sk9_A 28 AHMLDTAAVALAVLRMEPPRTRALYAEDWGLPE----------EGALAWAAALVGLHDLGKASPVFQAGWEEGKERVQRA 97 (265)
T ss_dssp HHHHHHHHHHHHHHHHSCHHHHHHHHHHHTSCH----------HHHHHHHHHHHTTTTGGGCSGGGCC------------
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCH----------HHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHhhc
Confidence 68888888888887763 33333211 12357888999999999971 11
Q ss_pred ----------CCchhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcCCCCCC
Q 007976 418 ----------KGYHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRKKFPRS 465 (582)
Q Consensus 418 ----------~~h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk~~~~~ 465 (582)
..|..-|++++.+--.=.|++.+... .++.++..|++..|..
T Consensus 98 g~~~~~~~~~~~Ha~aGa~ll~~~L~~~g~~~~~~~------~ia~~I~gHHG~~p~~ 149 (265)
T 3sk9_A 98 GLPFGELLDWVAHGVFTELFLRRLLKEKGLPERAAN------DLAAALGAHHGFPANA 149 (265)
T ss_dssp ---------CCCHHHHHHHHHHHHHHHTTCCHHHHH------HHHHHTSTTTTSCCCH
T ss_pred cCCccccCCCCChHHHHHHHHHHHHHhCCCCHHHHH------HHHHHHHHHcCCCCCc
Confidence 23555566666432000288888777 7888888888877653
No 49
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=91.70 E-value=0.92 Score=46.81 Aligned_cols=76 Identities=18% Similarity=0.244 Sum_probs=46.3
Q ss_pred HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCC------eEE---EEEEEech
Q 007976 104 DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRG------KVV---FCESVNLG 174 (582)
Q Consensus 104 ~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~------~~~---~~~SlplG 174 (582)
+.+.+ +-+..|+++..+--|=+|-....|.... ..+...+|+|+|||+|.+++++.+ .+. ...+.++|
T Consensus 152 ~~~~~-a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lG 228 (383)
T 1dkg_D 152 QATKD-AGRIAGLEVKRIINEPTAAALAYGLDKG--TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLG 228 (383)
T ss_dssp HHHHH-HHHHTTCEESCCCBHHHHHHHHHTCCC---CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCS
T ss_pred HHHHH-HHHHcCCceEEEeccHHHHHHHHHhccC--CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCC
Confidence 33444 4566799865444444444333332211 123468999999999999988743 322 24567899
Q ss_pred HHHHHHhh
Q 007976 175 HVSLSEKF 182 (582)
Q Consensus 175 ~vrl~e~f 182 (582)
.-.+.+.+
T Consensus 229 G~~id~~l 236 (383)
T 1dkg_D 229 GEDFDSRL 236 (383)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 98887755
No 50
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=91.62 E-value=2.7 Score=41.20 Aligned_cols=113 Identities=17% Similarity=0.203 Sum_probs=61.6
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEE-E
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA-V 92 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~-v 92 (582)
++..||+||.++..+|.+ +++ +++.+...+ +|.- ++... ++|++.. ++.+.....+.. .
T Consensus 2 ~~lGID~GsT~tk~av~d--~~~--~il~~~~~~---------~g~~-~e~a~---~vl~~~~---~~a~~~~~~~~~~a 61 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILK--NGE--DIVASETIS---------SGTG-TTGPS---RVLEKLY---GKTGLAREDIKKVV 61 (276)
T ss_dssp EEEEEEECSSCEEEEEEE--TTT--EEEEEEEES---------CCTT-SSHHH---HHHHHHH---HHHCCCGGGEEEEE
T ss_pred eEEEEEcCccEEEEEEEE--CCC--eEEEEEEec---------CCCC-HHHHH---HHHHHHH---HHCCCcchhccccc
Confidence 367899999999988875 334 344332111 1221 22222 3444433 334554444444 4
Q ss_pred EehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee-CCeE
Q 007976 93 ATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK-RGKV 165 (582)
Q Consensus 93 ATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~-~~~~ 165 (582)
.|.+-+.|- +.++..|+-- +|. .+|+....+ ....++|+|||.+.+++.. +|.+
T Consensus 62 ~t~~~~~a~-------------~~~~~~Vne~-~ah--a~a~~~~~~---~~~~vl~lgG~~~~~~~~~~~g~~ 116 (276)
T 4ehu_A 62 VTGYGRMNY-------------SDADKQISEL-SCH--ARGVNFIIP---ETRTIIDIGGQDAKVLKLDNNGRL 116 (276)
T ss_dssp EESTTGGGC-------------CSCSEECCHH-HHH--HHHHHHHST---TCCEEEEECSSCEEEEEECTTSCE
T ss_pred cCchHHHHh-------------hCCCcccchH-HHH--HHHHHHhCC---CCCeEEEEcCCCceEEEEEecCce
Confidence 566666653 3456667633 343 233333222 2358999999999988774 4544
No 51
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=91.39 E-value=1.1 Score=49.57 Aligned_cols=109 Identities=16% Similarity=0.232 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhccCCCCCCceE
Q 007976 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (582)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~I~~~tG~~i-~VIsgeEEA~l~~~gv~~~l~~~~~~~l 146 (582)
...|+..++.++.+ |.+..++ ++.--|-=... ....+..+-+..|+++ ++|+...-|-+.| |.... ..+...+
T Consensus 117 a~iL~~lk~~ae~~lg~~v~~~-VITVPa~f~~~-qr~a~~~Aa~~AGl~v~~li~EP~AAAlay-gl~~~--~~~~~vl 191 (605)
T 4b9q_A 117 AEVLKKMKKTAEDYLGEPVTEA-VITVPAYFNDA-QRQATKDAGRIAGLEVKRIINEPTAAALAY-GLDKG--TGNRTIA 191 (605)
T ss_dssp HHHHHHHHHHHHHHHTSCCCEE-EEEECTTCCHH-HHHHHHHHHHHTTCEEEEEEEHHHHHHHHH-HTTSC--CSSEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCeE-EEEECCCCCHH-HHHHHHHHHHHcCCceEEEeCcHHHHHHHh-hhhcc--CCCCEEE
Confidence 44567777777666 5443222 22221111111 1223444556679986 5676666665554 44322 1235689
Q ss_pred EEEeCCCceEEEEeeCCe------E---EEEEEEechHHHHHHhh
Q 007976 147 SVDIGGGSTEFVIGKRGK------V---VFCESVNLGHVSLSEKF 182 (582)
Q Consensus 147 viDIGGGStEl~~~~~~~------~---~~~~SlplG~vrl~e~f 182 (582)
|+|+|||++.+++++-+. + -.....++|.-.+.+.+
T Consensus 192 V~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l 236 (605)
T 4b9q_A 192 VYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp EEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHH
T ss_pred EEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHH
Confidence 999999999999876433 1 12334577877766644
No 52
>2hek_A Hypothetical protein; predominantly alpha helical protein with GDP binding site AN site being FAR from EACH other, structural genomics, PSI; HET: GDP; 2.00A {Aquifex aeolicus} SCOP: a.211.1.1
Probab=91.17 E-value=0.37 Score=50.14 Aligned_cols=75 Identities=24% Similarity=0.364 Sum_probs=51.3
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhccccc----------CCCCchhhhHHHHHc
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT----------SKKGYHKQSCHIIMN 430 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I----------~~~~h~kHS~yiI~n 430 (582)
.|+..|+.+|..+...+. + +++ .++.+||+|||||... ...+|..-|..++.+
T Consensus 53 ~Hsl~V~~~a~~ia~~~~----~-----------~~~--~~~~~AaLLHDiG~~pfsh~~e~~~~~g~~He~~g~~i~~~ 115 (371)
T 2hek_A 53 EHSLGVYHITERICESLK----V-----------KEK--ELVKLAGLLHDLGHPPFSHTTEVLLPRERSHEDFTERVIKE 115 (371)
T ss_dssp HHHHHHHHHHHHHHHHHT----C-----------TTH--HHHHHHHHTTTTTCCSSSSCHHHHSTTSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC----C-----------CHH--HHHHHHHHHHhcCccccccchHHHhccCCCHHHHHHHHHhc
Confidence 799999999998865542 1 222 6899999999999976 346677778887653
Q ss_pred CC---CCCC-CCHHHHhhhhhHHHHHHHHHhh
Q 007976 431 GD---HLYG-YSTDEIKHLVCLQLIALLTRFH 458 (582)
Q Consensus 431 s~---~l~G-~s~~E~~~~~~~~~iA~iaryh 458 (582)
.+ .|-. +++++.. .|+.+..-+
T Consensus 116 ~~i~~iL~~~~~~~~i~------~I~~~I~~~ 141 (371)
T 2hek_A 116 TEIYEILKQDYSHEDIE------RLVRITLGK 141 (371)
T ss_dssp SHHHHHHHTTSCHHHHH------HHHHHHHTC
T ss_pred chHHHHHHHhCCHHHHH------HHHHHHhcC
Confidence 10 0111 7777777 666666644
No 53
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=90.95 E-value=0.13 Score=54.06 Aligned_cols=92 Identities=16% Similarity=0.171 Sum_probs=33.0
Q ss_pred CCCCccEEEEEeh-hhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee
Q 007976 83 NISRDHTRAVATA-AVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (582)
Q Consensus 83 ~v~~~~i~~vATs-A~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~ 161 (582)
++++.+..++-|. +.-...|++.+.+.+.+..|++. +.=-.|+-++.+|. ....++|+|+|+|.|.++.+.
T Consensus 99 ~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~--~~~~~~~~~a~~a~------g~~~~lVVDiG~g~T~v~pv~ 170 (394)
T 1k8k_B 99 NIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSG--VYVAIQAVLTLYAQ------GLLTGVVVDSGDGVTHICPVY 170 (394)
T ss_dssp ---------------------------------------------------------------CCEEEECSSCEEEECEE
T ss_pred CcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCe--EEEEhhHHHHHHhC------CCceEEEEEcCCCceEeeeeE
Confidence 4433333445554 33344567777777777667653 22234444444432 123579999999999999999
Q ss_pred CCeEEE--EEEEechHHHHHHhh
Q 007976 162 RGKVVF--CESVNLGHVSLSEKF 182 (582)
Q Consensus 162 ~~~~~~--~~SlplG~vrl~e~f 182 (582)
+|.+.. ..++|+|.-.+++.+
T Consensus 171 ~G~~~~~~~~~~~~GG~~lt~~l 193 (394)
T 1k8k_B 171 EGFSLPHLTRRLDIAGRDITRYL 193 (394)
T ss_dssp TTEECSTTCEEESCCHHHHHHHH
T ss_pred CCEEcccceEEeeccHHHHHHHH
Confidence 998876 578999988777643
No 54
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=90.93 E-value=1.1 Score=49.63 Aligned_cols=161 Identities=16% Similarity=0.237 Sum_probs=87.7
Q ss_pred ceE-EEEEecccceEEEEEEEeCCCC-EEEEEeeeeeeeeccCCCcC------CCCCHHHHHH-HHHHHHH-HHHHHHHc
Q 007976 13 TLF-ASIDMGTSSFKLLIIRAYPNGK-FLTIDTLKQPVILGRDLSSS------CSISTQSQAR-SVESLLM-FRDIIQSH 82 (582)
Q Consensus 13 ~~~-AvIDIGSNSiRL~I~e~~~~~~-~~~l~~~k~~vrLg~g~~~~------g~Ls~e~i~r-~~~~L~~-f~~~~~~~ 82 (582)
+.| .+|||||.+|....+++. +|. +...-..+-.++.|+++-.. +.=..+.+++ .+++|.+ +.+++++.
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~-tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~ 283 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLV-SGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEH 283 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETT-TCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEecccceeEEEEECC-CCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 345 589999999999999986 564 33333445556788886421 1111122333 3445554 45566777
Q ss_pred CCCCccEE---EEEehhh------------hhcCChHHHHHHH---HHHcCCc------EEEe---ChHHHHHHHHhhhh
Q 007976 83 NISRDHTR---AVATAAV------------RAAENKDEFVECV---REKVGFE------VDVL---TGEQEAKFVYMGVL 135 (582)
Q Consensus 83 ~v~~~~i~---~vATsA~------------R~A~N~~~fl~~I---~~~tG~~------i~VI---sgeEEA~l~~~gv~ 135 (582)
++++++|. ++|-.+| +.|.=...|.+.. ..++|++ |.++ +|.-=|-...--+.
T Consensus 284 ~i~~~~I~~~~v~GNt~M~hLllgi~p~~L~~~Py~p~~~~~~~~~a~~lgl~~~p~~~v~~lP~i~~~VGaDi~Ag~la 363 (631)
T 3zyy_X 284 GVEKKEIMAAVVAGNTTMTHLFLEIDPRYIRLEPYTPAALFIPPVPATEAKIEMNPKGFVYIMPNVASYVGGDITSGVLY 363 (631)
T ss_dssp TCCGGGEEEEEEEECHHHHHHHHTCCCGGGSSTTTCCSCSCCCCEEHHHHTCSSCTTSEEEECCCCBTTBCHHHHHHHHH
T ss_pred CCCHHHeeEEEEEccHHHHHHHcCCChHHhccCCcccccCCCceecHHHcCCCcCCCCEEEEcCcccccccHHHHHHHHh
Confidence 88876653 3343333 2222111110000 1234554 3333 33222222211111
Q ss_pred ccCCCCCCceEEEEeCCCceEEEEeeCCeEEEEEEEechHH
Q 007976 136 QFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFCESVNLGHV 176 (582)
Q Consensus 136 ~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~~SlplG~v 176 (582)
..+...++..|++|||. +.|+++++++++ .+.|-+-|+.
T Consensus 364 ~~~~~~~~~~L~iDiGT-NgEivL~~~~~l-~~~S~aAGPA 402 (631)
T 3zyy_X 364 TGLANSDEITLFIDIGT-NGEMVLGNKDWL-VTCACSAGPA 402 (631)
T ss_dssp HTTTSCSSCEEEEECSS-EEEEEEECSSCE-EEEEEECCGG
T ss_pred cCcccCCCCEEEEEcCC-CeEEEEeeCCEE-EEEeccCchh
Confidence 22333446789999986 789999987776 4679999985
No 55
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=90.83 E-value=1.9 Score=48.40 Aligned_cols=111 Identities=17% Similarity=0.252 Sum_probs=61.8
Q ss_pred HHHHHHHHHHHHHHc-CCCCccEEEEEe-hhhhhcCChHHHHHHHHHHcCCcE-EEeChHHHHHHHHhhhhc-cCC---C
Q 007976 68 SVESLLMFRDIIQSH-NISRDHTRAVAT-AAVRAAENKDEFVECVREKVGFEV-DVLTGEQEAKFVYMGVLQ-FLP---V 140 (582)
Q Consensus 68 ~~~~L~~f~~~~~~~-~v~~~~i~~vAT-sA~R~A~N~~~fl~~I~~~tG~~i-~VIsgeEEA~l~~~gv~~-~l~---~ 140 (582)
....|+..++.++.+ |-+.. .+|-| -|.=....++.+.+ +-+..|+++ ++|+...=|-+.| |... .++ .
T Consensus 119 ~a~~L~~lk~~ae~~lg~~v~--~~VITVPa~f~~~qR~a~~~-Aa~~AGl~~~~li~EP~AAAlay-gl~~~~~~~~~~ 194 (675)
T 3d2f_A 119 AAMFIDKVKDTVKQDTKANIT--DVCIAVPPWYTEEQRYNIAD-AARIAGLNPVRIVNDVTAAGVSY-GIFKTDLPEGEE 194 (675)
T ss_dssp HHHHHHHHHHHHHHHHCSCCC--EEEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHH-HHHCSCCCCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCcc--eEEEEECCCCCHHHHHHHHH-HHHHcCCceEEEEcchHHHHHHH-hhhccccccccC
Confidence 344566666666554 43322 22333 21111111233444 445679986 5666555555555 5433 222 1
Q ss_pred CCCceEEEEeCCCceEEEEee--CCeE-EEE--EEEechHHHHHHhh
Q 007976 141 FDRLVLSVDIGGGSTEFVIGK--RGKV-VFC--ESVNLGHVSLSEKF 182 (582)
Q Consensus 141 ~~~~~lviDIGGGStEl~~~~--~~~~-~~~--~SlplG~vrl~e~f 182 (582)
.+...+|+|+|||+|.++++. +|.+ +.+ ...++|.-.+.+.+
T Consensus 195 ~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 195 KPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred CCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 235689999999999999876 6665 222 24688887776643
No 56
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=90.70 E-value=2.5 Score=42.82 Aligned_cols=140 Identities=12% Similarity=0.116 Sum_probs=83.6
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCc-c--EE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRD-H--TR 90 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~-~--i~ 90 (582)
++..||+|..++|..+++. +|. ++.+.+... ......+ .++.++...++++++.+ +.+++.. + -.
T Consensus 7 ~~lgiDiGgt~~~~~l~d~--~g~--i~~~~~~~~---~~~~~~~--~~~~~~~i~~~i~~~~~---~~~~~~~~~i~gi 74 (347)
T 2ch5_A 7 IYGGVEGGGTRSEVLLVSE--DGK--ILAEADGLS---TNHWLIG--TDKCVERINEMVNRAKR---KAGVDPLVPLRSL 74 (347)
T ss_dssp EEEEEEECTTCEEEEEEET--TSC--EEEEEEECC---CCHHHHC--HHHHHHHHHHHHHHHHH---HHTCCTTCCBSEE
T ss_pred EEEEEEcCccceEEEEEeC--CCC--EEEEEeCCC---CCcccCC--HHHHHHHHHHHHHHHHH---hcCCCcccceeEE
Confidence 6789999999999999975 354 343332210 0000000 23456666667766654 3344322 2 35
Q ss_pred EEEehhhhhcCChHHHHHHHHHHcC---CcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEEE
Q 007976 91 AVATAAVRAAENKDEFVECVREKVG---FEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVVF 167 (582)
Q Consensus 91 ~vATsA~R~A~N~~~fl~~I~~~tG---~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~~ 167 (582)
.+|....-+..+...+.+.+++.+| .+|.|.+.-.=|.+.+ .. .+++++=+|.|+--..+..+|..-.
T Consensus 75 gi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~------~~---~~~v~v~~GTGig~~~v~~~G~~c~ 145 (347)
T 2ch5_A 75 GLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA------TP---DGGVVLISGTGSNCRLINPDGSESG 145 (347)
T ss_dssp EEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH------CS---SCEEEEEESSSEEEEEECTTSCEEE
T ss_pred EEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh------CC---CCcEEEEEcCCceeEEEcCCCCEEe
Confidence 6677776554444567788888997 8999887665554441 11 3478888899987766654555432
Q ss_pred EEEEechHH
Q 007976 168 CESVNLGHV 176 (582)
Q Consensus 168 ~~SlplG~v 176 (582)
.=..|++
T Consensus 146 --cG~~G~l 152 (347)
T 2ch5_A 146 --CGGWGHM 152 (347)
T ss_dssp --EECCCTT
T ss_pred --cCCcCcc
Confidence 2345654
No 57
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=89.32 E-value=3 Score=45.76 Aligned_cols=110 Identities=18% Similarity=0.175 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHH-HH-HHcCCCCcc---EEEEEe-hhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccC
Q 007976 65 QARSVESLLMFRD-II-QSHNISRDH---TRAVAT-AAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFL 138 (582)
Q Consensus 65 i~r~~~~L~~f~~-~~-~~~~v~~~~---i~~vAT-sA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l 138 (582)
+....+.+...-+ .+ +..++++.+ ..++=| ..+-.-.|++.+++-+.+..|++-=-+. .++-++.+|.-
T Consensus 170 ~~~~wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~--~~~vla~ya~G--- 244 (593)
T 4fo0_A 170 LTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVH--QESVCATYGSG--- 244 (593)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEE--EHHHHHHHHHT---
T ss_pred hhcCHHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEee--chHHHHHHHCC---
Confidence 4444555554322 23 456776543 334544 4455556788899999999888844333 35566655532
Q ss_pred CCCCCceEEEEeCCCceEEEEeeCCeEE--EEEEEechHHHHHHhh
Q 007976 139 PVFDRLVLSVDIGGGSTEFVIGKRGKVV--FCESVNLGHVSLSEKF 182 (582)
Q Consensus 139 ~~~~~~~lviDIGGGStEl~~~~~~~~~--~~~SlplG~vrl~e~f 182 (582)
...++|||+|-+.|-++-+.+|.++ ....+++|.-.+++.+
T Consensus 245 ---~~tglVVDiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L 287 (593)
T 4fo0_A 245 ---LSSTCIVDVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCF 287 (593)
T ss_dssp ---CSEEEEEEECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHH
T ss_pred ---CCceEEEEeCCCceeeeeeECCEEehhheEEecccHHHHHHHH
Confidence 2358999999999999999998876 4578999998888865
No 58
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=88.65 E-value=2.1 Score=47.46 Aligned_cols=109 Identities=16% Similarity=0.245 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHc-CCCCccEEEEEehhhhhcCChHHHHHHHHHHcCCcEE-EeChHHHHHHHHhhhhccCCCCCCceE
Q 007976 69 VESLLMFRDIIQSH-NISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVD-VLTGEQEAKFVYMGVLQFLPVFDRLVL 146 (582)
Q Consensus 69 ~~~L~~f~~~~~~~-~v~~~~i~~vATsA~R~A~N~~~fl~~I~~~tG~~i~-VIsgeEEA~l~~~gv~~~l~~~~~~~l 146 (582)
...|+..++.++.| +.+..++ +++--|.=....++.+.+ +-+..|+++. +|+...=|-+.| |.-.. ..+...+
T Consensus 117 a~~L~~l~~~ae~~l~~~v~~~-VitVPa~f~d~qr~a~~~-A~~~AGl~v~~li~EP~AAAlay-~l~~~--~~~~~vl 191 (605)
T 2kho_A 117 AEVLKKMKKTAEDYLGEPVTEA-VITVPAYFNDAQRQATKD-AGRIAGLEVKRIINEPTAAALAY-GLDKG--TGNRTIA 191 (605)
T ss_dssp HHHHHHHHHHHHHHHCSCCCEE-EEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHT-TTTSS--SSEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCcEE-EEEECCCCCHHHHHHHHH-HHHHcCCceEEEecCHHHHHHHh-hhccc--CCCCEEE
Confidence 34566666666654 4332222 222221111111233333 4456799965 555555444544 43221 1235689
Q ss_pred EEEeCCCceEEEEee------CCeEE---EEEEEechHHHHHHhh
Q 007976 147 SVDIGGGSTEFVIGK------RGKVV---FCESVNLGHVSLSEKF 182 (582)
Q Consensus 147 viDIGGGStEl~~~~------~~~~~---~~~SlplG~vrl~e~f 182 (582)
|+|+|||+|.+++++ +|.+. .....++|.-.+.+.+
T Consensus 192 V~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l 236 (605)
T 2kho_A 192 VYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRL 236 (605)
T ss_dssp EEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHH
T ss_pred EEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHH
Confidence 999999999999876 34332 2345688887666543
No 59
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=88.18 E-value=1.7 Score=45.96 Aligned_cols=100 Identities=15% Similarity=0.078 Sum_probs=68.1
Q ss_pred HcCCCCccEEEEEehhhhh-cCChHHHHHHHHHHcCCc-EEEeChHHHHHHHHhhhhccCCC--CCCceEEEEeCCCceE
Q 007976 81 SHNISRDHTRAVATAAVRA-AENKDEFVECVREKVGFE-VDVLTGEQEAKFVYMGVLQFLPV--FDRLVLSVDIGGGSTE 156 (582)
Q Consensus 81 ~~~v~~~~i~~vATsA~R~-A~N~~~fl~~I~~~tG~~-i~VIsgeEEA~l~~~gv~~~l~~--~~~~~lviDIGGGStE 156 (582)
..++.+.+-.++-|++.-. ..|++...+-+.+..|.+ +-++ .++-++.+|.-..... ....++|||+|+|.|.
T Consensus 116 ~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~---~~~vla~~a~G~~~~~~~~~~tglVVDiG~g~T~ 192 (427)
T 3dwl_A 116 YLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIA---VQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTH 192 (427)
T ss_dssp TSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEE---EHHHHHHHGGGGSTTTCSCCCCEEEEEESSSCEE
T ss_pred hhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeec---chHHHHHHhcCCcccccCCCceEEEEECCCCceE
Confidence 3567655556677765433 346667777777778887 4444 4566666554211101 1245899999999999
Q ss_pred EEEeeCCeEEE--EEEEechHHHHHHhhc
Q 007976 157 FVIGKRGKVVF--CESVNLGHVSLSEKFG 183 (582)
Q Consensus 157 l~~~~~~~~~~--~~SlplG~vrl~e~f~ 183 (582)
++.+.+|.+.. ..++++|.-.+++.+.
T Consensus 193 v~PV~~G~~l~~~~~rl~~gG~~lt~~L~ 221 (427)
T 3dwl_A 193 IIPVAEGYVIGSSIKTMPLAGRDVTYFVQ 221 (427)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHHH
T ss_pred EEEEECCEEehhhheeccccHHHHHHHHH
Confidence 99999998886 6889999998888653
No 60
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=87.95 E-value=8.9 Score=39.46 Aligned_cols=134 Identities=14% Similarity=0.072 Sum_probs=81.2
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHH--cCCCCccEE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQS--HNISRDHTR 90 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~--~~v~~~~i~ 90 (582)
.++..||||.+++++.+++.. |. ++.+.+.++.. . .=.++.++...++++++.+.... ..+ .-.
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~~--G~--vl~~~~~~~~~--~-----~~~~~~~~~l~~~i~~~~~~~~~~~~~i---~gi 152 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDAS--MN--ILAHEAHPLPS--Q-----SDREETLNVMYRIIDRAKDMMEKLGSKL---SAL 152 (380)
T ss_dssp CEEEEEEECSSEEEEEEEETT--CC--EEEEEEEECCS--S-----CCHHHHHHHHHHHHHHHHHHHHHTTCCC---CEE
T ss_pred CeEEEEEECCCEEEEEEECCC--CC--EEEEEEEccCC--C-----CCHHHHHHHHHHHHHHHHHhcCCCcCcE---EEE
Confidence 367899999999999999763 54 34444333211 0 01345677777777777654321 122 124
Q ss_pred EEEehhhhhc--------CC----hHHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceE
Q 007976 91 AVATAAVRAA--------EN----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTE 156 (582)
Q Consensus 91 ~vATsA~R~A--------~N----~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~--gv~~~l~~~~~~~lviDIGGGStE 156 (582)
+||....-+. .| .-.+.+.+++++|++|.|.+.-.=|-+.-. |.. . ++.+++-+|.| +-
T Consensus 153 gi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~-----~-~~~v~l~~GtG-iG 225 (380)
T 2hoe_A 153 TVAAPGPIDTERGIIIDPRNFPLSQIPLANLLKEKYGIEVWVENDADMGAVGEKWYTKR-----D-DSFAWILTGKG-IG 225 (380)
T ss_dssp EEEESSCEETTTTEECCCSSCTTBTSCHHHHHHHHHCSEEEEEEHHHHHHHHHHHHTTC-----C-SCEEEEEESSS-CE
T ss_pred EEEeeccEECCCCEEeccCCCCCcCCChHHHHHHHhCCCEEEechHHHHHHHHHHhCCC-----C-CcEEEEEeCCc-eE
Confidence 5565554322 22 135678888899999999887655544422 221 1 45899999988 45
Q ss_pred EEEeeCCeEEE
Q 007976 157 FVIGKRGKVVF 167 (582)
Q Consensus 157 l~~~~~~~~~~ 167 (582)
..++-+|++..
T Consensus 226 ~giv~~G~l~~ 236 (380)
T 2hoe_A 226 AGIIIDGELYR 236 (380)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEec
Confidence 66666777653
No 61
>2dqb_A Deoxyguanosinetriphosphate triphosphohydrolase, P; dntpase, DNTP, single-stranded DNA, DNA dGTPase, HD superfamily, structural genomics; 2.20A {Thermus thermophilus}
Probab=87.88 E-value=1.1 Score=46.48 Aligned_cols=52 Identities=23% Similarity=0.309 Sum_probs=37.9
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccc---------c-------CCCCchhhh
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHF---------T-------SKKGYHKQS 424 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~---------I-------~~~~h~kHS 424 (582)
.|+--|+.+|..+...|. + + ..++++||+|||||.. + ....|..+|
T Consensus 78 ~HSl~Va~iar~ia~~l~----l-----------~---~~l~~~a~LlHDiGh~PFgH~~E~~l~~~~~~~ggf~Hn~~s 139 (376)
T 2dqb_A 78 THTLEVAQVSRSIARALG----L-----------N---EDLTEAIALSHDLGHPPFGHTGEHVLNALMQDHGGFEHNAQA 139 (376)
T ss_dssp HHHHHHHHHHHHHHHHTT----C-----------C---HHHHHHHHHHTTTTCCSSTTHHHHHHHHHTTTTTCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC----C-----------C---HHHHHHHHHHHhcCCCccccchHHHHHHHhhccCCCcHHHHH
Confidence 799999999998765542 2 2 2689999999999975 1 224577777
Q ss_pred HHHHHc
Q 007976 425 CHIIMN 430 (582)
Q Consensus 425 ~yiI~n 430 (582)
+.++..
T Consensus 140 ~ril~~ 145 (376)
T 2dqb_A 140 LRILTH 145 (376)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 777765
No 62
>1vqr_A Hypothetical protein CJ0248; HD-domain/pdease-like fold, structural genomics, joint cente structural genomics, JCSG; 2.25A {Campylobacter jejuni subsp} SCOP: a.211.1.3
Probab=85.92 E-value=1.2 Score=44.43 Aligned_cols=38 Identities=16% Similarity=0.182 Sum_probs=26.7
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhccccc
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I 415 (582)
.|+..|+.+|..+-. ..+ ..+...+..|++|||||+.+
T Consensus 127 ~hs~~va~~a~~la~----~~~-------------~~~~e~a~~aGLLHDIGkl~ 164 (297)
T 1vqr_A 127 KTCNEEATFIANWLN----DED-------------KKLSHLLVPCAMLLRLGIVI 164 (297)
T ss_dssp HHHHHHHHHHHHHHT----TTC-------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH----hcc-------------CCCHHHHHHHHHHHHccHHH
Confidence 588888888886532 211 12345688999999999876
No 63
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=85.55 E-value=4.8 Score=40.41 Aligned_cols=134 Identities=13% Similarity=0.121 Sum_probs=83.4
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (582)
.++..||||.+++++.+++. +|. ++.+.+.++.-..+ .++.++...+.++++.+ ....+ .-.++
T Consensus 19 ~~~lgidiggt~i~~~l~d~--~g~--il~~~~~~~~~~~~-------~~~~~~~i~~~i~~~~~--~~~~i---~gigi 82 (321)
T 3r8e_A 19 GMILGIDVGGTSVKFGLVTP--EGE--IQNATRFMTADWVN-------GIGFVESMKLEIGNFLK--QYPIV---KGVGI 82 (321)
T ss_dssp CCEEEEECCSSEEEEEEECT--TCC--EEEEEEEEHHHHHT-------TTCHHHHHHHHHHHHHH--HCTTC---CEEEE
T ss_pred cEEEEEEECCCEEEEEEEcC--CCc--EEEEEEEeCCCCCC-------HHHHHHHHHHHHHHHHh--ccCCe---eEEEE
Confidence 46789999999999999964 354 45444444321111 23456666666666654 22233 23456
Q ss_pred Eehhhhh--------cCC-----hHHHHHHHHHHc-CCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCceE
Q 007976 93 ATAAVRA--------AEN-----KDEFVECVREKV-GFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTE 156 (582)
Q Consensus 93 ATsA~R~--------A~N-----~~~fl~~I~~~t-G~~i~VIsgeEEA~l~~--~gv~~~l~~~~~~~lviDIGGGStE 156 (582)
|....-+ +.| .-.+.+.+++++ |++|.|.+.-.=+-+.- .|... ..++.+++-+|.| +-
T Consensus 83 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~~pV~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-iG 157 (321)
T 3r8e_A 83 GWPGLVSLDRTKVILLPNIPSVVNVPIVEILRSEFPHIHFKIENDAKCAALGEYYFGENK----RMQTFILLALGTG-VG 157 (321)
T ss_dssp EESSEECTTSCCEEEBTTBCCCCSCCHHHHHHHHCTTSEEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EE
T ss_pred EecccEECCCCEEEeCCCCccccCCCHHHHHHHHcCCCCEEEEchHHHHHHHHHHhCCCC----CCCcEEEEEECCc-eE
Confidence 6555433 222 235677889999 99999988766555442 23222 2345899999998 66
Q ss_pred EEEeeCCeEEE
Q 007976 157 FVIGKRGKVVF 167 (582)
Q Consensus 157 l~~~~~~~~~~ 167 (582)
..++.+|++..
T Consensus 158 ~gii~~G~l~~ 168 (321)
T 3r8e_A 158 SGVMMNGKLFI 168 (321)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEec
Confidence 67777888764
No 64
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=84.83 E-value=3.4 Score=44.79 Aligned_cols=82 Identities=15% Similarity=0.199 Sum_probs=46.1
Q ss_pred cccCCCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHcC
Q 007976 7 YMQIPQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHN 83 (582)
Q Consensus 7 ~~~~~~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~--Ls~e~-i~r~~~~L~~f~~~~~~~~ 83 (582)
|..|..+++.+||+|+.|+|..+++. +|+ ++...+.++.. ...+.|. -.++. .+.++++++ +++++.+
T Consensus 20 ~~~MM~~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~--~~p~~g~~e~dp~~~~~~i~~~i~---~~~~~~~ 90 (520)
T 4e1j_A 20 FQSMMGGYILAIDQGTTSTRAIVFDG--NQK--IAGVGQKEFKQ--HFPKSGWVEHDPEEIWQTVVSTVK---EAIEKSG 90 (520)
T ss_dssp CCCCCSCEEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHH---HHHHTTT
T ss_pred HHHHhhCeEEEEEeCCcceEEEEECC--CCC--EEEEEEEeccc--ccCCCCcEEECHHHHHHHHHHHHH---HHHHhcC
Confidence 33333468899999999999999974 454 34444333321 1112232 23333 344444444 4455667
Q ss_pred CCCccEEEEEehhh
Q 007976 84 ISRDHTRAVATAAV 97 (582)
Q Consensus 84 v~~~~i~~vATsA~ 97 (582)
++..+|.+|+-++-
T Consensus 91 ~~~~~I~~Igis~~ 104 (520)
T 4e1j_A 91 ITANDIAAIGITNQ 104 (520)
T ss_dssp CCGGGEEEEEEEEC
T ss_pred CCcccEEEEEEeCC
Confidence 76667888775443
No 65
>3i7a_A Putative metal-dependent phosphohydrolase; YP_926882.1, STRU genomics, joint center for structural genomics, JCSG; 2.06A {Shewanella amazonensis SB2B}
Probab=84.74 E-value=2.4 Score=42.00 Aligned_cols=98 Identities=11% Similarity=0.078 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccC---------------------CCC
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS---------------------KKG 419 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~---------------------~~~ 419 (582)
.|+..|+.+|..|-..+....+++ ..+...+..|++|||||...= ...
T Consensus 120 ~hs~~vA~~a~~la~~~~~~~~~~-----------~~~~~~~~laGLLHdiGkl~l~~~~~~~~~~l~~~~~~~~~~~~~ 188 (281)
T 3i7a_A 120 RTSIDVTAAACSLLQIYNKKHPGS-----------GLNYDTLTLAGLVHNIGALPVLTEAEAHPEMFTTIEHLRSLVRKM 188 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTC-----------CCCHHHHHHHHHHTTTTHHHHHHHHHHCGGGCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccccC-----------CCCHHHHHHHHHHHHCCHHHHHHhHHhhHHHhcChHHHHHHHhCc
Confidence 689999999988655553322221 122356889999999998531 114
Q ss_pred chhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcCCCCCCCchhhcCCCHHHHHHHHHHHHHHHHHHHhccc
Q 007976 420 YHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRKKFPRSHHAFLEEFPEQAKQKFRVLCAIVRLSVILQQN 497 (582)
Q Consensus 420 h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk~~~~~~~~~~~~L~~~~~~~v~kL~~iLRlA~~Ld~s 497 (582)
|..-+++++.+- ||.. .+..+++||....... + ...++.++++|+.+...
T Consensus 189 H~~iGa~ll~~w----~lp~----------~i~~ai~~Hh~~~~~~--~------------~~~~~~iV~lAd~~~~~ 238 (281)
T 3i7a_A 189 QGPIGRAVLKSW----DFAP----------EVMEVVERWADLPYLG--D------------HVSYLDFIRAAAFYTGE 238 (281)
T ss_dssp HHHHHHHHHHHT----TCCH----------HHHHHHHHTTCTTCCC--S------------SCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHC----CCCH----------HHHHHHHHHcChhhcC--C------------cCCHHHHHHHHHHHcCC
Confidence 666777777654 4432 3445666776532210 0 11256688888887643
No 66
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=84.58 E-value=6.7 Score=39.32 Aligned_cols=130 Identities=18% Similarity=0.212 Sum_probs=79.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (582)
++..||||..++++.+++. +|. ++.+.+.++ ..+ .++.++...+.++++. +.+.+ .-..++
T Consensus 3 ~~lgiDiGgt~i~~~l~d~--~G~--i~~~~~~~~-------~~~--~~~~~~~i~~~i~~~~---~~~~i---~gigi~ 63 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVDE--EGR--ILSTFKVAT-------PPT--AEGIVDAICAAVAGAS---EGHDV---EAVGIG 63 (321)
T ss_dssp EEEEEEECSSEEEEEEECT--TCC--BCCCEEEEC-------CSS--HHHHHHHHHHHHHHHH---TTCCE---EEEEEE
T ss_pred EEEEEEECCCEEEEEEECC--CCC--EEEEEEeeC-------CCC--HHHHHHHHHHHHHHHH---hhcCc---eEEEEe
Confidence 6789999999999999964 343 344444333 111 2344555555555553 22222 223455
Q ss_pred ehhhhh--------cCC----hHHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceEEEE
Q 007976 94 TAAVRA--------AEN----KDEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFVI 159 (582)
Q Consensus 94 TsA~R~--------A~N----~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~--gv~~~l~~~~~~~lviDIGGGStEl~~ 159 (582)
....=+ +.| .-.+.+.+++++|++|.+.+.-.=+-+.-. |... ..++.+++-+|.| +-..+
T Consensus 64 ~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~gi 138 (321)
T 3vgl_A 64 AAGYVDDKRATVLFAPNIDWRHEPLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQ----GHDDVICITLGTG-LGGGI 138 (321)
T ss_dssp ESSEECTTSSCEEECSSSCCEEECHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EEEEE
T ss_pred ccccEeCCCCEEEeCCCCCCcCCCHHHHHhhhhCCCEEEEehhhhHHHHHHHhCCCC----CCCCEEEEEeCcc-eEEEE
Confidence 544322 222 235678889999999999987665555432 2211 2356899999998 77777
Q ss_pred eeCCeEEE
Q 007976 160 GKRGKVVF 167 (582)
Q Consensus 160 ~~~~~~~~ 167 (582)
+-+|++..
T Consensus 139 i~~G~l~~ 146 (321)
T 3vgl_A 139 IIGNKLRR 146 (321)
T ss_dssp EETTEECC
T ss_pred EECCEEec
Confidence 77888764
No 67
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=83.98 E-value=38 Score=34.07 Aligned_cols=148 Identities=13% Similarity=0.153 Sum_probs=81.9
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHH-HHHHHHHHHcCCCCccEEEEE
Q 007976 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESL-LMFRDIIQSHNISRDHTRAVA 93 (582)
Q Consensus 15 ~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L-~~f~~~~~~~~v~~~~i~~vA 93 (582)
+-.||.++......+++ +|+ ++....+ ++-. ...|..++++-..-.+.| .-..+.+++.|++..++.+||
T Consensus 3 iLgIdts~~~~~val~~---~g~--i~~~~~~--~~~~--~~gg~~p~~~~~~h~~~l~~~i~~~L~~agi~~~did~Ia 73 (330)
T 2ivn_A 3 ALGIEGTAHTLGIGIVS---EDK--VLANVFD--TLTT--EKGGIHPKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIA 73 (330)
T ss_dssp EEEEECSSSEEEEEEEC---SSC--EEEEEEE--ECCC--TTCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEE
T ss_pred EEEEEccCCCeEEEEEE---CCE--EEEEEEE--Eeec--ccCCcCchhhHHHHHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence 67899999999999883 343 4433222 2221 112333333333333333 345556666677766666666
Q ss_pred eh-------hhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 007976 94 TA-------AVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (582)
Q Consensus 94 Ts-------A~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (582)
.+ ++|.. -.|.+.+....++++.-++-- +|... +... -+. +.+ +++.+.||.|+++..+++++.
T Consensus 74 ~~~GPG~~~~lrvg---~~~ak~la~~~~~pl~~v~h~-~aHa~--~a~~-~~~-~~~-~~l~v~GG~t~~i~~~~~~~~ 144 (330)
T 2ivn_A 74 FSQGPGLGPALRVV---ATAARALAVKYRKPIVGVNHC-IAHVE--ITKM-FGV-KDP-VGLYVSGGNTQVLALEGGRYR 144 (330)
T ss_dssp EEEESSCHHHHHHH---HHHHHHHHHHTTCCEEEEEHH-HHHHH--GGGG-GTC-CSC-EEEEECSSCEEEEEEETTEEE
T ss_pred EECCCCchHHHHHH---HHHHHHHHHHcCCCEEeeCcH-HHHHH--HHhh-cCC-CCC-eEEEEcCCCceEEEEcCCeEE
Confidence 42 34542 346666667788888877653 44321 2211 121 222 677777789999988887765
Q ss_pred EE-EEEechHHHHHH
Q 007976 167 FC-ESVNLGHVSLSE 180 (582)
Q Consensus 167 ~~-~SlplG~vrl~e 180 (582)
.. .+++-++=++.+
T Consensus 145 ~lg~t~dds~Gr~fD 159 (330)
T 2ivn_A 145 VFGETLDIGIGNAID 159 (330)
T ss_dssp EEEEBSSSCHHHHHH
T ss_pred EEEeecCchhHHHHH
Confidence 32 344444444444
No 68
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=83.62 E-value=19 Score=37.63 Aligned_cols=135 Identities=14% Similarity=0.096 Sum_probs=82.7
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEE-
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA- 91 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~- 91 (582)
.++..||||.+++++.+++. +|. ++.+.+.++. . .+ .++.++...++++++.+ +.+++..++..
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~--~G~--il~~~~~~~~--~----~~--~~~~~~~l~~~i~~~~~---~~~~~~~~i~gi 172 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHEL--GGE--VLIDTKIDIH--E----ID--QDDVLARLLFEIEEFFQ---TYAAQLDRVTSI 172 (429)
T ss_dssp EEEEEEEEETTEEEEEEEET--TSC--EEEEEEEECC--C----CB--HHHHHHHHHHHHHHHHH---HTTTTCCEEEEE
T ss_pred CEEEEEEECCCEEEEEEECC--CCC--EEEEEEEcCC--C----CC--HHHHHHHHHHHHHHHHH---hcCCCcCceEEE
Confidence 46789999999999999975 354 3444433321 1 11 34556777777766643 45554344543
Q ss_pred -EEehhhhh--------cCC----hHHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCceE
Q 007976 92 -VATAAVRA--------AEN----KDEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTE 156 (582)
Q Consensus 92 -vATsA~R~--------A~N----~~~fl~~I~~~tG~~i~VIsgeEEA~l~~--~gv~~~l~~~~~~~lviDIGGGStE 156 (582)
+|....=+ +.| .-.+.+.+++++|++|.|.+.-.=|-+.- .|... ..++.+++-+|.| +-
T Consensus 173 gi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~L~~~~~~pV~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-iG 247 (429)
T 1z05_A 173 AITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQ----DVDNSVLISIHHG-LG 247 (429)
T ss_dssp EEEESSEEETTTTEEEECSSSBCSSBCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EE
T ss_pred EEeccCcEeCCCCeEeecCCCCCCCCCHHHHHHHHhCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCc-EE
Confidence 44444322 222 13567888899999999988766555442 22221 2345899999988 55
Q ss_pred EEEeeCCeEEE
Q 007976 157 FVIGKRGKVVF 167 (582)
Q Consensus 157 l~~~~~~~~~~ 167 (582)
..++-+|++..
T Consensus 248 ~giv~~G~l~~ 258 (429)
T 1z05_A 248 AGIVLDGRVLQ 258 (429)
T ss_dssp EEEEETTEECC
T ss_pred EEEEECCEEee
Confidence 66667777653
No 69
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=83.58 E-value=2.9 Score=45.41 Aligned_cols=78 Identities=15% Similarity=0.237 Sum_probs=46.8
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHHH-HHHHHHHHHHHHHHHHcCCCCcc
Q 007976 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQSQ-ARSVESLLMFRDIIQSHNISRDH 88 (582)
Q Consensus 12 ~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~--Ls~e~i-~r~~~~L~~f~~~~~~~~v~~~~ 88 (582)
++++.+||+||.|+|.++++ .+|+. +.....+... ...+.|. -+++.+ +.+++++ ++.++..++++.+
T Consensus 3 kkYvlgID~GTss~Ka~l~d--~~G~~--va~~~~~~~~--~~p~~G~~Eqdp~~~w~~~~~~i---~~~l~~~~~~~~~ 73 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMD--HDANI--ISVSQREFEQ--IYPKPGWVEHDPMEIWATQSSTL---VEVLAKADISSDQ 73 (526)
T ss_dssp CCEEEEEEECSSEEEEEEEC--TTCCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHH---HHHHHHHTCCGGG
T ss_pred ceEEEEEEccccceeeeEEc--CCCCE--EEEEEEecCc--ccCCCCcEEECHHHHHHHHHHHH---HHHHHHcCCChhh
Confidence 46889999999999999996 35653 4333333222 1122232 244443 3444444 4555666888788
Q ss_pred EEEEEehhhh
Q 007976 89 TRAVATAAVR 98 (582)
Q Consensus 89 i~~vATsA~R 98 (582)
|.+++-++.|
T Consensus 74 I~aIgis~q~ 83 (526)
T 3ezw_A 74 IAAIGITNQR 83 (526)
T ss_dssp EEEEEEEECS
T ss_pred EEEEEEeCCC
Confidence 9998854443
No 70
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=82.89 E-value=14 Score=38.20 Aligned_cols=135 Identities=12% Similarity=0.077 Sum_probs=81.2
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEE-
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA- 91 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~- 91 (582)
.++..||||.+++++.+++. +|. ++.+.+.+. . .. + .++.++...++++++.+ +.+++..++..
T Consensus 85 ~~~lgiDiG~t~i~~~l~d~--~G~--il~~~~~~~--~---~~-~--~~~~~~~l~~~i~~~~~---~~~~~~~~i~gi 149 (406)
T 1z6r_A 85 WHYLSLRISRGEIFLALRDL--SSK--LVVEESQEL--A---LK-D--DLPLLDRIISHIDQFFI---RHQKKLERLTSI 149 (406)
T ss_dssp CEEEEEEEETTEEEEEEEET--TCC--EEEEEEEEC--C---SS-C--SSCHHHHHHHHHHHHHH---HTGGGCCCEEEE
T ss_pred cEEEEEEEcCCEEEEEEEcC--CCC--EEEEEEecC--C---CC-C--HHHHHHHHHHHHHHHHH---hcCCCcCceeEE
Confidence 46789999999999999975 354 344444333 1 11 1 24456777777776654 33433234443
Q ss_pred -EEehhh--------hhcCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCce
Q 007976 92 -VATAAV--------RAAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGST 155 (582)
Q Consensus 92 -vATsA~--------R~A~N~-----~~fl~~I~~~tG~~i~VIsgeEEA~l~~--~gv~~~l~~~~~~~lviDIGGGSt 155 (582)
||.... ..+.|- -.+.+.+++++|++|.|.+.-.=|-+.- .|... ..++.+++-+|.| +
T Consensus 150 gi~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pv~v~NDa~aaalaE~~~g~~~----~~~~~v~l~~GtG-i 224 (406)
T 1z6r_A 150 AITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASR----GARDVIQVVIDHN-V 224 (406)
T ss_dssp EEEESSEEETTTTEEEECTTCTTCSSBCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-E
T ss_pred EEEeecCEeCCCCEEecCCCCCCccCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhcCCC----CCCcEEEEEECCc-E
Confidence 444433 122332 3567888889999999987655444432 22211 2345899999998 5
Q ss_pred EEEEeeCCeEEE
Q 007976 156 EFVIGKRGKVVF 167 (582)
Q Consensus 156 El~~~~~~~~~~ 167 (582)
-..++-+|++..
T Consensus 225 G~giv~~G~l~~ 236 (406)
T 1z6r_A 225 GAGVITDGHLLH 236 (406)
T ss_dssp EEEEEETTEETT
T ss_pred EEEEEECCEEee
Confidence 566677777653
No 71
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=81.21 E-value=19 Score=35.33 Aligned_cols=128 Identities=12% Similarity=0.070 Sum_probs=76.6
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 007976 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (582)
Q Consensus 15 ~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls-~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (582)
+..||+|..+++..+++ + | +++.+.+.+. .... ..+ ++.+++..+++++.... ....+ .-..++
T Consensus 2 ~lgiDiGGT~~~~~l~d-~--g--~il~~~~~~~---~~~~---~~~~~~~~~~i~~~i~~~~~~-~~~~i---~~igig 66 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-E--G--KSLGRFQTSG---INPF---QQDRNEIDTALRSEVLPAIGQ-KASSI---RAVYFY 66 (291)
T ss_dssp EEEEEECSSEEEEEEEE-T--T--EEEEEEEEEC---CCTT---TSCHHHHHHHHTTTTHHHHTT-STTTC---CEEEEE
T ss_pred EEEEEeCccceEEEEEe-C--C--eEEEEEECCC---CCcc---cCCHHHHHHHHHHHHHHHhCC-Ccccc---cEEEEE
Confidence 57899999999999997 3 4 3454443211 0110 112 33455555555443210 00112 235667
Q ss_pred ehhhhhcCChHHHHHHHHHHcCC--cEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 007976 94 TAAVRAAENKDEFVECVREKVGF--EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (582)
Q Consensus 94 TsA~R~A~N~~~fl~~I~~~tG~--~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (582)
+...- ..++..+.+.+++.++. ++.|-+.-.=|.+.-. . .++++++=+|.||--..+..+|++.
T Consensus 67 ~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~------g--~~~~v~v~~GTGigg~~i~~~G~~~ 132 (291)
T 1zbs_A 67 GAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC------G--DSEGIACILGTGSNSCLFDGREIKA 132 (291)
T ss_dssp ETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT------T--TSCEEEEEESSSEEEEEECSSSEEE
T ss_pred CCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc------C--CCCcEEEEecCChheEEECCCCcEE
Confidence 77754 45566788888999995 9999887766555431 2 2457888899999656665577764
No 72
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=80.02 E-value=5.3 Score=41.39 Aligned_cols=142 Identities=15% Similarity=0.116 Sum_probs=76.6
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeecc--CCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGR--DLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRA 91 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~--g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~ 91 (582)
.+.+||||++++++.+++. + +++.+.+.++.-.. + .+ .+ .+.++..++.+.++. ++++++..++.+
T Consensus 3 ~vlgidiGgt~ik~al~d~---~--~il~~~~~~~~~~~~~~-~~--~~-~~~~~~~~~~i~~~l---~~~~~~~~~i~g 70 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFED---E--RMVKMQNFSHSPDELGR-FQ--KI-LDQLEFREKIARQFV---EETGYSLSSFSA 70 (381)
T ss_dssp EEEEEEECSSEEEEEEEET---T--EEEEEEEEECCHHHHHT-CS--SG-GGGHHHHHHHHHHHH---HTTTCCGGGCSE
T ss_pred eEEEEECCccceeEEEEec---c--hheeeeecccCcccccc-hh--hH-HHHHHHHHHHHHHHH---HHcCCCccCceE
Confidence 4789999999999999962 2 56665554432110 1 00 11 123333355555543 344443222222
Q ss_pred -EEe--------hhh-----------------hhcCCh-HHHHHHHHHHcCCcEEEeChHH------HHHHHHh------
Q 007976 92 -VAT--------AAV-----------------RAAENK-DEFVECVREKVGFEVDVLTGEQ------EAKFVYM------ 132 (582)
Q Consensus 92 -vAT--------sA~-----------------R~A~N~-~~fl~~I~~~tG~~i~VIsgeE------EA~l~~~------ 132 (582)
++. ..+ ..+.|- -.+.+.+++++|+++-|.+.-. +|+...+
T Consensus 71 Ii~~pG~vd~~~G~~~~i~~~~~~~l~~~~~~~~~~nl~~~l~~~l~~~~~~Pv~v~NDan~~~~~~~a~aaalp~~~r~ 150 (381)
T 1saz_A 71 FVSRGGLLDPIPGGVYLVDGLMIKTLKSGKNGEHASNLGAIIAHRFSSETGVPAYVVDPVVVDEMEDVARVSGHPNYQRK 150 (381)
T ss_dssp EEEECCSCSCBCSSEEECCHHHHHHHHHTTTCCCTTHHHHHHHHHHHHHHCCCEEEESCTTBCCCCGGGTBCSSTTCBCC
T ss_pred EEecCCCCCCCCCceEecCHHHHHHHHhcccccChhhhhHHHHHHHHHhcCCCEEEeCCCccccCcHHHHHcCCcchhhh
Confidence 442 122 234442 3445667889999998877664 3333222
Q ss_pred -----------hh-h-c--cCCCCCCceEEEEeCCCceEEEEeeCCeEEEE
Q 007976 133 -----------GV-L-Q--FLPVFDRLVLSVDIGGGSTEFVIGKRGKVVFC 168 (582)
Q Consensus 133 -----------gv-~-~--~l~~~~~~~lviDIGGGStEl~~~~~~~~~~~ 168 (582)
|= . . .-+..+.+.+++-+|.|. -...+.+|++...
T Consensus 151 ~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtGi-G~g~i~~G~~~~G 200 (381)
T 1saz_A 151 SIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGGI-SIAAHRKGRVIDV 200 (381)
T ss_dssp CCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSSE-EEEEEETTEEEEE
T ss_pred cccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCCc-EEEEEECCEEEEe
Confidence 21 1 0 111122268999999987 4555667877654
No 73
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=80.01 E-value=6.9 Score=43.38 Aligned_cols=112 Identities=15% Similarity=0.225 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHHH-HH--HcCCCCc---cEEEEEehhh-hhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhc
Q 007976 64 SQARSVESLLMFRDI-IQ--SHNISRD---HTRAVATAAV-RAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQ 136 (582)
Q Consensus 64 ~i~r~~~~L~~f~~~-~~--~~~v~~~---~i~~vATsA~-R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~ 136 (582)
++++..+.++.+-+- +. ..++.+. +..++-|.+. --..|++.+.+-+.+..|++-=-+ .+++-++.+|.
T Consensus 191 s~q~~WD~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl--~~qavlAlyas-- 266 (655)
T 4am6_A 191 SLAELISDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAI--IQESLATCYGA-- 266 (655)
T ss_dssp SHHHHHHHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEE--EEHHHHHHHHS--
T ss_pred cccccHHHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeee--ccHHHHHHHhC--
Confidence 344445555554332 22 4567653 3455666543 334567778888888888874434 23666666553
Q ss_pred cCCCCCCceEEEEeCCCceEEEEeeCCeEEE--EEEEechHHHHHHhh
Q 007976 137 FLPVFDRLVLSVDIGGGSTEFVIGKRGKVVF--CESVNLGHVSLSEKF 182 (582)
Q Consensus 137 ~l~~~~~~~lviDIGGGStEl~~~~~~~~~~--~~SlplG~vrl~e~f 182 (582)
++ ...++|||+|+|.|.++-+.+|.++. ...+++|.-.+++.+
T Consensus 267 Gl---~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL 311 (655)
T 4am6_A 267 GI---STSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLF 311 (655)
T ss_dssp CC---SSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHH
T ss_pred CC---CCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHH
Confidence 21 23489999999999999998887763 367999998888754
No 74
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=79.80 E-value=19 Score=36.18 Aligned_cols=133 Identities=11% Similarity=0.073 Sum_probs=76.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls-~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (582)
++..||||.+.+|+.+++. +|. ++.+.+.++. . -+ ++.++...+.++++.. .++.. .-..+
T Consensus 25 ~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~--~-------~~~~~~~~~i~~~i~~~~~---~~~~~--~gigi 86 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE--KLE--RVATERVPTP--T-------DDYPLLLETIAGLVAKYDQ---EFACE--GKIGL 86 (327)
T ss_dssp CEEEEEECSSEEEEEEECT--TCC--EEEEEEEECC--T-------TCHHHHHHHHHHHHHHHHH---HHTSC--CEEEE
T ss_pred EEEEEEECCCEEEEEEEeC--CCc--EEEEEEecCC--C-------CCHHHHHHHHHHHHHHHHH---hcCCc--cEEEE
Confidence 5789999999999999965 354 4544443321 0 02 3334444444444432 23321 23455
Q ss_pred EehhhhhcC------------ChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEe
Q 007976 93 ATAAVRAAE------------NKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIG 160 (582)
Q Consensus 93 ATsA~R~A~------------N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~ 160 (582)
|....-+.. +.-.+.+.+++++|++|.|.+.-.=+-+.-.-.-.. ...++.+++-+|.| +-..++
T Consensus 87 ~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pV~v~NDa~aaalgE~~~g~~--~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 87 GLPGMEDADDATVLTVNVPAAKGKPLRADLEAKIGRSVKIENDANCFALSEAWDEEL--QDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp EESEEECTTTCCEEESSSGGGTTSCHHHHHHHHHSSCCEEEEHHHHHHHHHHTSTTT--TTCSEEEEEEESSS-EEEEEE
T ss_pred EeeccEeCCCCEEEcCCCccccCCCHHHHHHHHHCCCEEEecchhHHHHHHHHhCCC--CCCCcEEEEEeCcc-ceEEEE
Confidence 554443322 223567888999999999988765554443211011 12345788999988 556666
Q ss_pred eCCeEEE
Q 007976 161 KRGKVVF 167 (582)
Q Consensus 161 ~~~~~~~ 167 (582)
-+|++..
T Consensus 164 ~~G~l~~ 170 (327)
T 4db3_A 164 YEGKVFS 170 (327)
T ss_dssp ETTEECC
T ss_pred ECCEEee
Confidence 6787653
No 75
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=78.70 E-value=5.2 Score=43.12 Aligned_cols=76 Identities=12% Similarity=0.114 Sum_probs=44.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHH-HHHHHHHHHHHHHHHHHHcCCCCccE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQ-SQARSVESLLMFRDIIQSHNISRDHT 89 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~--Ls~e-~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (582)
+++..||+|+.|+|..+++ .+|+ ++...+.+... .....|. -+++ -.+.+++++++. +++.+++..+|
T Consensus 7 ~~~lgIDiGtts~k~~l~d--~~G~--il~~~~~~~~~--~~p~~g~~e~dp~~~~~~i~~~i~~~---~~~~~~~~~~I 77 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVR--LPDT--VVAVASRPTTL--SSPHPGWAEEDPAQWWDNARAVLAEL---KTTAGESDWRP 77 (508)
T ss_dssp CEEEEEEECSSEEEEEEEE--TTTE--EEEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHHHH---HHHHCGGGCCE
T ss_pred CEEEEEEecCcceEEEEEC--CCCC--EEEEEEEecce--ecCCCCceEECHHHHHHHHHHHHHHH---HHhcCCChhhe
Confidence 5788999999999999997 3564 45544444322 1112222 2333 344455555544 44446655578
Q ss_pred EEEEehhh
Q 007976 90 RAVATAAV 97 (582)
Q Consensus 90 ~~vATsA~ 97 (582)
.+|+-++-
T Consensus 78 ~~Igis~~ 85 (508)
T 3ifr_A 78 GGICVTGM 85 (508)
T ss_dssp EEEEEEEC
T ss_pred EEEEEECC
Confidence 87775443
No 76
>2pgs_A Putative deoxyguanosinetriphosphate triphosphohyd; deoxyguanosinetriphosphate triphsphohydrolase, pseudomonas S PV. phaseolicola 1448A; 2.35A {Pseudomonas syringae PV}
Probab=78.66 E-value=2.2 Score=45.36 Aligned_cols=47 Identities=17% Similarity=0.281 Sum_probs=32.7
Q ss_pred hhHHHHHHHHHHHHHHHHhc-cc-ccchhhhhhccCCcch-HHHHHHHHHHhhcccc
Q 007976 361 KAGAQCASIAKDIFEGLRKC-DK-LYNNQVKLIASFEDKD-LEYLEAACLLHNIGHF 414 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~-~~-l~~~~~~~~~~~~~~~-~~LL~~Aa~LHdIG~~ 414 (582)
.|+--|+.+|..+...|... .. ++. .+++++ +.++++||++||||..
T Consensus 65 ~Hsl~v~~ia~~~~~~l~~~~~~~~~~-------~~~~~~~~~~v~~a~L~HDiGH~ 114 (451)
T 2pgs_A 65 THSLEVSCVGRSLGMRVGETLRAALPD-------WCDPSDLGMVVQSACLAHDIGNP 114 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGSCT-------TCCHHHHHHHHHHHHHHTTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccc-------ccchhHHHHHHHHHHHhhccCCC
Confidence 79999999999988888742 11 110 122333 3599999999999953
No 77
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=77.64 E-value=5.3 Score=43.40 Aligned_cols=77 Identities=12% Similarity=0.073 Sum_probs=43.3
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeee--ec-----cCCCc--CC--CCCHH-HHHHHHHHHHHHHHHHH
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVI--LG-----RDLSS--SC--SISTQ-SQARSVESLLMFRDIIQ 80 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vr--Lg-----~g~~~--~g--~Ls~e-~i~r~~~~L~~f~~~~~ 80 (582)
+++..||+||.|+|.++++. +|++ +.....+.. .- .|... .| +-+++ ....++.++.+ .+.
T Consensus 10 ~~~lgID~GTts~Ka~l~d~--~G~v--v~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~---~l~ 82 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDA--ELNV--FYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILE---KMK 82 (538)
T ss_dssp CEEEEEEECSSEEEEEEEET--TCCE--EEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHH---HHH
T ss_pred CEEEEEEEcCcCEEEEEECC--CCCE--EEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHH---HHH
Confidence 57999999999999999973 5654 433333321 11 11111 11 11233 44555544433 334
Q ss_pred HcCCCCccEEEEEehh
Q 007976 81 SHNISRDHTRAVATAA 96 (582)
Q Consensus 81 ~~~v~~~~i~~vATsA 96 (582)
+.+++..+|.+|+-++
T Consensus 83 ~~~~~~~~I~aIgis~ 98 (538)
T 4bc3_A 83 ASGFDFSQVLALSGAG 98 (538)
T ss_dssp HTTCCGGGEEEEEEEE
T ss_pred HcCCChHHeEEEEecc
Confidence 5677667898887443
No 78
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=77.14 E-value=7.7 Score=41.66 Aligned_cols=74 Identities=14% Similarity=0.242 Sum_probs=43.3
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHH-HHHHHHHHHHHHHHHHHHcCCCCccE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQ-SQARSVESLLMFRDIIQSHNISRDHT 89 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~--Ls~e-~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (582)
+++.+||+|+.|+|..+++. +|++ +...+.+... .....|. -.++ -.+.++++++ +++++.+++..+|
T Consensus 6 ~~~lgIDiGtts~k~~l~d~--~G~i--l~~~~~~~~~--~~p~~g~~e~d~~~~~~~~~~~i~---~~~~~~~~~~~~I 76 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ--KGEI--AGVAQREFKQ--YFPQSGWVEHDANEIWTSVLAVMT---EVINENDVRADQI 76 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSCE--EEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHH---HHHHTTTCCGGGE
T ss_pred cEEEEEEeCccceEEEEEcC--CCCE--EEEEEeeccc--ccCCCCcEEECHHHHHHHHHHHHH---HHHHhcCCCcccE
Confidence 47899999999999999964 4543 4444333321 1122232 2333 3344444554 4455667766678
Q ss_pred EEEEeh
Q 007976 90 RAVATA 95 (582)
Q Consensus 90 ~~vATs 95 (582)
.+|+-+
T Consensus 77 ~~Igis 82 (501)
T 3g25_A 77 AGIGIT 82 (501)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 887754
No 79
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=76.57 E-value=30 Score=34.70 Aligned_cols=134 Identities=10% Similarity=0.018 Sum_probs=79.5
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEE--
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-- 90 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~-- 90 (582)
.++..||||.+++++.+++. +|. ++.+.+.+.. . . .++.++...+.++++..... .+..++.
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~------~-~--~~~~~~~i~~~i~~~~~~~~---~~~~~i~gi 93 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSM--KGE--IVKKYTQFNP------K-T--YEERINLILQMCVEAAAEAV---KLNCRILGV 93 (343)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEECC------S-S--HHHHHHHHHHHHHHHHHHHH---HTTEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC--CCc--EEEEEEEcCC------C-C--HHHHHHHHHHHHHHHHHhcc---cccCceEEE
Confidence 45688999999999999975 354 3444333321 1 1 24556777777777654332 1112343
Q ss_pred EEEehhh--------hhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCc
Q 007976 91 AVATAAV--------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGS 154 (582)
Q Consensus 91 ~vATsA~--------R~A~N~------~~fl~~I~~~tG~~i~VIsgeEEA~l~~~--gv~~~l~~~~~~~lviDIGGGS 154 (582)
+++.... ..+.|- -.+.+.+++++|++|.|.+.-.=|-+.-. |... ..++.+++-+|.|
T Consensus 94 gi~~pG~vd~~~g~v~~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~v~i~~GtG- 168 (343)
T 2yhw_A 94 GISTGGRVNPREGIVLHSTKLIQEWNSVDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGK----GLENFVTLITGTG- 168 (343)
T ss_dssp EEEESSEEETTTTEEEECCTTSSSCSSEECHHHHHHHHCSCEEEEEHHHHHHHHHHHTSTTT----TCSCEEEEEESSS-
T ss_pred EEecccCEeCCCCEEEeCCcCCCCCcCCCHHHHHHHHHCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCC-
Confidence 3444433 222332 24567888889999999886655555432 2211 2245899999998
Q ss_pred eEEEEeeCCeEEE
Q 007976 155 TEFVIGKRGKVVF 167 (582)
Q Consensus 155 tEl~~~~~~~~~~ 167 (582)
+-..+.-+|++..
T Consensus 169 iG~gii~~G~l~~ 181 (343)
T 2yhw_A 169 IGGGIIHQHELIH 181 (343)
T ss_dssp EEEEEEETTEECC
T ss_pred EEEEEEECCEEec
Confidence 5566677777654
No 80
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=76.32 E-value=36 Score=33.75 Aligned_cols=133 Identities=11% Similarity=0.106 Sum_probs=79.1
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (582)
.++..||||.+.+++.+++. +|. ++.+.+.++. . .+ .++.++...+.++++.. ..+. -.-.++
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~--~g~--il~~~~~~~~--~----~~--~~~~~~~i~~~i~~~~~---~~~~--i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDS--TRR--LQWEKRVPTP--H----TS--YSAFLDAVCELVEEADQ---RFGV--KGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECC--C----SC--HHHHHHHHHHHHHHHHH---HHTS--CCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeC--CCC--EEEEEEecCC--C----CC--HHHHHHHHHHHHHHHHH---hcCC--ccEEEE
Confidence 45789999999999999975 354 4544433321 1 11 24455555555555443 2221 123566
Q ss_pred EehhhhhcC-------Ch-----HHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceEEE
Q 007976 93 ATAAVRAAE-------NK-----DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFV 158 (582)
Q Consensus 93 ATsA~R~A~-------N~-----~~fl~~I~~~tG~~i~VIsgeEEA~l~~~--gv~~~l~~~~~~~lviDIGGGStEl~ 158 (582)
|....-+.. |. -.+.+.+++.+|++|.|.+.-.=|-+.-. |... ..++.+++-+|.| +-..
T Consensus 87 ~~pG~vd~~~g~v~~~~~~~~~~~~l~~~l~~~~~~pv~v~NDa~aaalgE~~~g~~~----~~~~~v~l~~GtG-iG~g 161 (327)
T 2ap1_A 87 GIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRLDNDANCFALSEAWDDEFT----QYPLVMGLILGTG-VGGG 161 (327)
T ss_dssp EESSBSCCTTSCCBCTTCTTTTTSCHHHHHHHHHTSCEEEEEHHHHHHHHHHTSTTGG----GCSEEEEEEESSS-EEEE
T ss_pred EeeeeEECCCCEEEccCCCccCCCChHHHHHHHHCCCEEEecHHHHHHHHHHHhCcCC----CCCcEEEEEECCc-EEEE
Confidence 666553321 21 24567788889999999887766655432 2211 2345788999998 5566
Q ss_pred EeeCCeEEE
Q 007976 159 IGKRGKVVF 167 (582)
Q Consensus 159 ~~~~~~~~~ 167 (582)
+.-+|++..
T Consensus 162 iv~~G~l~~ 170 (327)
T 2ap1_A 162 LVLNGKPIT 170 (327)
T ss_dssp EEETTEEEC
T ss_pred EEECCEEee
Confidence 677777754
No 81
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=74.18 E-value=36 Score=33.66 Aligned_cols=126 Identities=16% Similarity=0.230 Sum_probs=74.7
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (582)
+++..||||..++++.+++. +|. ++.+.+.++. + .++.+++.. +.++++.+. -..+
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~t~-------~---~~~~l~~i~-------~~~~~~~i~---gigi 58 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRE--DGT--IIDRIEFPTX-------M---PDETIEXVI-------QYFSQFSLQ---AIGI 58 (302)
T ss_dssp CCEEEEEECSSEEEEEEECT--TSC--EEEEEEEECC-------C---HHHHHHHHH-------HHHTTSCCS---EEEE
T ss_pred cEEEEEEECcceeEEEEEEC--CCc--EEEEEEecCC-------C---hHHHHHHHH-------HHhccCCce---EEEE
Confidence 46889999999999999964 454 4555444431 0 122333322 233334442 3455
Q ss_pred Eehhh-------------hhcCC----hHHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCC
Q 007976 93 ATAAV-------------RAAEN----KDEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGG 153 (582)
Q Consensus 93 ATsA~-------------R~A~N----~~~fl~~I~~~tG~~i~VIsgeEEA~l~~--~gv~~~l~~~~~~~lviDIGGG 153 (582)
|+... ..+.| .-.+.+.+++++|++|.+.+.-.=|-+.- .|... ..++.+++-+|.|
T Consensus 59 ~~pG~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~G~~~----~~~~~~~l~~GtG 134 (302)
T 3epq_A 59 GSFGPVDNDXTSQTYGTITATPXAGWRHYPFLQTVXNEMXIPVGFSTDVNAAALGEFLFGEAX----GLDSCLYITIGTG 134 (302)
T ss_dssp EECSSEECCTTSTTTTEECCCSSTTTBTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSCEEEEEESSS
T ss_pred EeceeeccccccccccEEecCCCCCccCCChHHHHHHHhCCCEEEechhHHHHHHHHHhCCCC----CCCcEEEEEECCc
Confidence 54332 22333 23567889999999999988766554442 23221 2245888999876
Q ss_pred ceEEEEeeCCeEEE
Q 007976 154 STEFVIGKRGKVVF 167 (582)
Q Consensus 154 StEl~~~~~~~~~~ 167 (582)
+--.++-+|++..
T Consensus 135 -iG~gii~~G~l~~ 147 (302)
T 3epq_A 135 -IGAGAIVEGRLLQ 147 (302)
T ss_dssp -EEEEEEETTEECC
T ss_pred -eEEEEEECCEEcc
Confidence 5556666788764
No 82
>3m1t_A Putative phosphohydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE GOL; 1.62A {Shewanella amazonensis} SCOP: a.211.1.0
Probab=74.06 E-value=6.2 Score=38.82 Aligned_cols=38 Identities=21% Similarity=0.194 Sum_probs=26.9
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccC
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTS 416 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~ 416 (582)
.|+..|+.+|..|-..+ ++ + ...+..|++|||||..+-
T Consensus 108 ~hs~~~a~~a~~la~~~----~~-----------~---~~~~~~agLLhdiGkl~l 145 (275)
T 3m1t_A 108 GNTFEVAIICQELAKRL----GT-----------L---PEEAFTCGILHSIGELLI 145 (275)
T ss_dssp HHHHHHHHHHHHHHHHH----TS-----------C---HHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----CC-----------C---HHHHHHHHHHHHccHHHH
Confidence 58888888888754332 32 1 235789999999998764
No 83
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=73.54 E-value=9.1 Score=41.25 Aligned_cols=74 Identities=9% Similarity=0.034 Sum_probs=42.9
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHHH-HHHHHHHHHHHHHHHHcCCCCccE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQSQ-ARSVESLLMFRDIIQSHNISRDHT 89 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~--Ls~e~i-~r~~~~L~~f~~~~~~~~v~~~~i 89 (582)
+++.+||+|+.|+|..+++. +|+ ++...+.+..+- ....|. -.++.+ +.+++++++. + +.+++..+|
T Consensus 5 ~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~~~---~-~~~~~~~~I 74 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADR--DGG--LHFQRSIALETY--GDGNGPVEQDAGDWYDAVQRIASSW---W-QSGVDARRV 74 (511)
T ss_dssp CEEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCCB--STTSSCCEECHHHHHHHHHHHHHHH---H-TTTCCGGGE
T ss_pred cEEEEEEeCCCceEEEEECC--CCC--EEEEEEeeccee--cCCCCCEEECHHHHHHHHHHHHHHH---H-hcCCChhHe
Confidence 47899999999999999974 454 344443333221 122232 234433 3344455443 3 556666678
Q ss_pred EEEEehh
Q 007976 90 RAVATAA 96 (582)
Q Consensus 90 ~~vATsA 96 (582)
.+|+-++
T Consensus 75 ~~Igis~ 81 (511)
T 3hz6_A 75 SAIVLSG 81 (511)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 8887543
No 84
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=73.47 E-value=19 Score=35.27 Aligned_cols=114 Identities=14% Similarity=0.137 Sum_probs=67.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls-~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (582)
++..||+|..++|+.+++. +|. ++.+.+.+.. ... ..+ ++.++...+.++++.. .. + ...++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~--~g~--i~~~~~~~~~---~~~---~~~~~~~~~~i~~~i~~~~~---~~-~---~~igi 65 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDC--EGN--FIGEGSSGPG---NYH---NVGLTRAIENIKEAVKIAAK---GE-A---DVVGM 65 (299)
T ss_dssp CEEEEEECSSCEEEEEECT--TSC--EEEEEEESCC---CHH---HHCHHHHHHHHHHHHHHHHT---SC-C---SEEEE
T ss_pred EEEEEEeCCCcEEEEEEcC--CCC--EEEEEeCCCC---Ccc---cCCHHHHHHHHHHHHHHHHh---cC-C---CEEEE
Confidence 4688999999999999964 454 3443332210 000 012 3445555555554432 22 3 35678
Q ss_pred EehhhhhcCCh-HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCc
Q 007976 93 ATAAVRAAENK-DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGS 154 (582)
Q Consensus 93 ATsA~R~A~N~-~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGS 154 (582)
|.... +..++ ..+.+.+++ +|+++.+.+.-.=+-+.- .. .++.+++-+|.|+
T Consensus 66 ~~~G~-~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e---~~-----~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 66 GVAGL-DSKFDWENFTPLASL-IAPKVIIQHDGVIALFAE---TL-----GEPGVVVIAGTGS 118 (299)
T ss_dssp EETTC-CSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHH---HT-----TSCEEEEEESSSE
T ss_pred EcCCC-CchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhc---cC-----CCCeEEEEecCCE
Confidence 88887 54333 245566666 899998877655444432 21 2458999999996
No 85
>3bg2_A DGTP triphosphohydrolase; structural genomics, NYSGXRC, target 10395N, triphosphohydro PSI-2, protein structure initiative; 1.95A {Leeuwenhoekiella blandensis}
Probab=73.26 E-value=2.3 Score=45.12 Aligned_cols=51 Identities=18% Similarity=0.230 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHHHHHHHHhc-c-cccchhhhhhccCCcch-HHHHHHHHHHhhccc
Q 007976 361 KAGAQCASIAKDIFEGLRKC-D-KLYNNQVKLIASFEDKD-LEYLEAACLLHNIGH 413 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~-~-~l~~~~~~~~~~~~~~~-~~LL~~Aa~LHdIG~ 413 (582)
.|+--|+.+|..+...|... . ..+. ........+++ ..++++||++||||.
T Consensus 67 tHSL~V~~iar~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~lv~~a~L~HDiGH 120 (444)
T 3bg2_A 67 THSLEVSVVGRSLGRMVGKKLLEKYPH--LEQVYGYKFNDFGAIVAAAALAHDIGN 120 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTH--HHHTTCCCHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc--cccccccchhhHHHHHHHHHHhcccCC
Confidence 78888888888877776431 0 0000 00000012222 479999999999995
No 86
>3ljx_A MMOQ response regulator; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Methylococcus capsulatus} PDB: 3ljv_A 3p3q_A
Probab=73.09 E-value=9 Score=37.94 Aligned_cols=38 Identities=13% Similarity=0.067 Sum_probs=27.1
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhccccc
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I 415 (582)
.|+..|+.+|..| ++..+. . +..-+..|++|||||+-+
T Consensus 111 ~hs~~~A~~a~~l----a~~~~~-----------~--~~~~~~~agLLhdiGkl~ 148 (288)
T 3ljx_A 111 QKSLARAVALQSI----TAQAST-----------V--APKEAFTLGLLADVGRLA 148 (288)
T ss_dssp HHHHHHHHHHHHH----HHTSSS-----------S--CHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHH----HHHCCC-----------C--CHHHHHHHHHHHhccHHH
Confidence 5888888888864 444332 1 235688999999999865
No 87
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=72.83 E-value=11 Score=40.64 Aligned_cols=75 Identities=15% Similarity=0.230 Sum_probs=44.1
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHcCCCCccE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHNISRDHT 89 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~--Ls~e~-i~r~~~~L~~f~~~~~~~~v~~~~i 89 (582)
+++..||+|+.|+|..+++. +|+ ++...+.+...- ....|. -.++. .+.++++++ +++++.+++..+|
T Consensus 3 ~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~~--~p~~g~~e~dp~~~~~~~~~~i~---~~~~~~~~~~~~I 73 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDH--DAN--IISVSQREFEQI--YPKPGWVEHDPMEIWATQSSTLV---EVLAKADISSDQI 73 (510)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHH---HHHHHTTCCGGGE
T ss_pred cEEEEEEcCCcceEEEEECC--CCC--EEEEEEEecccc--cCCCCcEEECHHHHHHHHHHHHH---HHHHHcCCChhhe
Confidence 46889999999999999964 454 444444433221 112222 23333 344444444 4455667776678
Q ss_pred EEEEehh
Q 007976 90 RAVATAA 96 (582)
Q Consensus 90 ~~vATsA 96 (582)
.+|+-++
T Consensus 74 ~~Igis~ 80 (510)
T 2p3r_A 74 AAIGITN 80 (510)
T ss_dssp EEEEEEE
T ss_pred EEEEEeC
Confidence 8887544
No 88
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=72.26 E-value=7.6 Score=41.76 Aligned_cols=76 Identities=16% Similarity=0.163 Sum_probs=43.7
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHH-HHHHHHHHHHHHHHHHHHcCCCCcc
Q 007976 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQ-SQARSVESLLMFRDIIQSHNISRDH 88 (582)
Q Consensus 12 ~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~--Ls~e-~i~r~~~~L~~f~~~~~~~~v~~~~ 88 (582)
++++.+||+|+.|+|..+++. +|+ ++...+.+... .....|. -.++ -.+.+++++++ ++++.+++..+
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~--~G~--il~~~~~~~~~--~~p~~g~~e~dp~~~~~~~~~~i~~---~~~~~~~~~~~ 74 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR--NGK--KIGSSQKEFPQ--YFPKSGWVEHNANEIWNSVQSVIAG---AFIESGIRPEA 74 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET--TSC--EEEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHHH---HHHHHTCCGGG
T ss_pred CCEEEEEEcCCCceEEEEECC--CCC--EEEEEEEecCc--cCCCCCcEEECHHHHHHHHHHHHHH---HHHHcCCChhh
Confidence 357899999999999999974 554 34444333322 1112222 2233 33444455544 44555776667
Q ss_pred EEEEEehh
Q 007976 89 TRAVATAA 96 (582)
Q Consensus 89 i~~vATsA 96 (582)
|.+|+-++
T Consensus 75 I~~Igis~ 82 (506)
T 3h3n_X 75 IAGIGITN 82 (506)
T ss_dssp EEEEEEEE
T ss_pred eEEEEeeC
Confidence 88877543
No 89
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=71.76 E-value=22 Score=34.64 Aligned_cols=130 Identities=13% Similarity=0.129 Sum_probs=75.3
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEe
Q 007976 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (582)
Q Consensus 15 ~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (582)
+..||||..++++.+++. +|+ ++.+.+.++.- ..+ .++.++...+.++++.. + + ...++|.
T Consensus 3 ~lgidiggt~~~~~l~d~--~g~--il~~~~~~~~~-----~~~--~~~~~~~i~~~i~~~~~---~--~---~~igi~~ 63 (289)
T 2aa4_A 3 TLAIDIGGTKLAAALIGA--DGQ--IRDRRELPTPA-----SQT--PEALRDALSALVSPLQA---H--A---QRVAIAS 63 (289)
T ss_dssp EEEEEECSSEEEEEEECT--TCC--EEEEEEEECCS-----SCC--HHHHHHHHHHHHTTTGG---G--C---SEEEEEE
T ss_pred EEEEEeCCCEEEEEEECC--CCC--EEEEEEecCCC-----CCC--HHHHHHHHHHHHHHHHh---h--C---CEEEEEe
Confidence 678999999999999965 454 45444433211 001 23344444444444321 1 2 2356666
Q ss_pred hhhhh--------cCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee
Q 007976 95 AAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (582)
Q Consensus 95 sA~R~--------A~N~-----~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~ 161 (582)
...-+ +.|- -.+.+.+++.+|+++.+.+.-.=|-+.-.-. .-.... +.+++-+|.| +-..+..
T Consensus 64 pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaa~~e~~~--g~~~~~-~~v~l~~GtG-iG~gii~ 139 (289)
T 2aa4_A 64 TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQA--LDGDIT-DMVFITVSTG-VGGGVVS 139 (289)
T ss_dssp SSEEETTEEECSSGGGGGGGTTCCHHHHHHHHHCSCEEEEEHHHHHHHHHHHT--SCTTCC-CEEEEEESSS-EEEEEEE
T ss_pred ccceeCCCCEEEeCCCCCcccCCChHHHHHHHHCCCEEEechHHHHHHHHHHh--CCCCCc-eEEEEEeCcc-EEEEEEE
Confidence 55422 2222 2467888889999999888655544442211 111122 6899999999 5767777
Q ss_pred CCeEEE
Q 007976 162 RGKVVF 167 (582)
Q Consensus 162 ~~~~~~ 167 (582)
+|++..
T Consensus 140 ~G~l~~ 145 (289)
T 2aa4_A 140 GCKLLT 145 (289)
T ss_dssp TTEEEC
T ss_pred CCEEee
Confidence 888764
No 90
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=71.30 E-value=11 Score=40.30 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=44.2
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHcCCCCccE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHT 89 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~L--s~-e~i~r~~~~L~~f~~~~~~~~v~~~~i 89 (582)
+++..||+|+.|+|..+++. +|. ++.+.+.+... .....|.. .+ +-.+.+++++++. ++..+++..+|
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~--~g~--~~~~~~~~~~~--~~p~~g~~e~d~~~~~~~~~~~i~~~---~~~~~~~~~~i 73 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR--ESN--IHGIGQYEFPQ--HYPRPGWVEHNPEEIWDAQLRAIKDA---IQSARIEPNQI 73 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT--TCC--EEEEEEEECCC--BCCSTTCCEECHHHHHHHHHHHHHHH---HHHHTCCGGGE
T ss_pred cEEEEEecCCchhEEEEECC--CCC--EEEEEEeccce--ecCCCCcEEECHHHHHHHHHHHHHHH---HHhcCCCcccE
Confidence 36899999999999999963 454 45444444322 11222322 23 3344555555554 44456665678
Q ss_pred EEEEehhh
Q 007976 90 RAVATAAV 97 (582)
Q Consensus 90 ~~vATsA~ 97 (582)
.+|+-++-
T Consensus 74 ~~Igis~~ 81 (497)
T 2zf5_O 74 AAIGVTNQ 81 (497)
T ss_dssp EEEEEEEC
T ss_pred EEEEEecC
Confidence 77775444
No 91
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=70.36 E-value=22 Score=35.43 Aligned_cols=133 Identities=16% Similarity=0.165 Sum_probs=74.8
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEE--
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR-- 90 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~-- 90 (582)
.++..||||.++++..+++. +|. ++.+.+.++. +. ..++.++...+.++++. +.++. ++.
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~--~~------~~~~~~~~i~~~i~~~~---~~~~~---~i~gi 68 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTA--EGE--TLHCEKKRTA--EV------IAPGLVSGIGEMIDEQL---RRFNA---RCHGL 68 (310)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEEHH--HH------HTTCHHHHHHHHHHHHH---HHHTE---EEEEE
T ss_pred CEEEEEEeCCCEEEEEEECC--CCC--EEEEEEecCc--cc------cHHHHHHHHHHHHHHHH---HhcCC---CeeEE
Confidence 46789999999999999975 354 4444333321 11 01223444444444443 33332 233
Q ss_pred EEEeh--------hhhhcCCh-------HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCce
Q 007976 91 AVATA--------AVRAAENK-------DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGST 155 (582)
Q Consensus 91 ~vATs--------A~R~A~N~-------~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGSt 155 (582)
.+|.. .++.+.|- -.+.+.+++++|++|.+.+.-.=|-+....- ... ...+.+++-+|.| +
T Consensus 69 gi~~pG~vd~~~g~v~~~~~l~~~~~~~~~l~~~l~~~~~~pv~v~NDanaaa~~e~~~-~~~--~~~~~~~v~~GtG-i 144 (310)
T 3htv_A 69 VMGFPALVSKDKRTIISTPNLPLTAADLYDLADKLENTLNCPVEFSRDVNLQLSWDVVE-NRL--TQQLVLAAYLGTG-M 144 (310)
T ss_dssp EEEESSCBCTTSSCBCSCCSSSCCHHHHTTHHHHHHHHHTSCEEEEEHHHHHHHHHHHH-TTC--TTSCEEEEEESSS-E
T ss_pred EEeccccEeCCCCEEEeCCCCCCccccCccHHHHHHHHhCCCEEEeeHHHHHHHHHHhh-ccc--CCceEEEEEecee-E
Confidence 33332 23345442 1467889999999999988776554432221 112 2345788888876 3
Q ss_pred EEEEeeCCeEEE
Q 007976 156 EFVIGKRGKVVF 167 (582)
Q Consensus 156 El~~~~~~~~~~ 167 (582)
--.++-+|++..
T Consensus 145 G~gii~~G~l~~ 156 (310)
T 3htv_A 145 GFAVWMNGAPWT 156 (310)
T ss_dssp EEEEEETTEEEC
T ss_pred EEEEEECCEEee
Confidence 444556777764
No 92
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=69.94 E-value=60 Score=31.91 Aligned_cols=132 Identities=13% Similarity=0.049 Sum_probs=77.7
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (582)
++..||||.+++++.+++.. + ++.+.+.++. ... .++.++...+.++++.+.. ...+. -.++|
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~--~---~l~~~~~~~~------~~~--~~~~~~~i~~~i~~~~~~~-~~~i~---gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK--R---LLSKVVVPTP------KEG--GERVAEALAEAAERAEREA-GVRGE---AIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS--S---BSCCEEEECC------SSC--HHHHHHHHHHHHHHHHHHH-TCCCS---SEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCC--C---cEEEEEEcCC------CCC--hHHHHHHHHHHHHHHHhhc-cCCce---EEEEE
Confidence 36799999999999999643 3 2333333321 111 1566777777777765432 22332 24555
Q ss_pred ehhhh--------hcCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceEEE
Q 007976 94 TAAVR--------AAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTEFV 158 (582)
Q Consensus 94 TsA~R--------~A~N~-----~~fl~~I~~~tG~~i~VIsgeEEA~l~~~--gv~~~l~~~~~~~lviDIGGGStEl~ 158 (582)
....- .+.|- -.+.+.+++++|++|.+.+.-.=|-+.-. |... ..++.+++-+|.| +--.
T Consensus 65 ~pG~vd~~~g~v~~~~~~~~w~~~~l~~~l~~~~~~pv~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~g 139 (302)
T 3vov_A 65 TPGPLDFRRGVIRFAPNIPGVQDFPIRRILEEATGRPVFLENDANAAALAEHHLGAAQ----GEESSLYLTVSTG-IGGG 139 (302)
T ss_dssp ESSCEETTTTEEC---CCTTCTTCCHHHHHHHHHSSCEEEEEHHHHHHHHHHHHSTTT----TCSCEEEEEESSS-EEEE
T ss_pred ecccEeCCCCEEEcCCCCCCcCCCChHHHHHHhhCCCEEEEechHHHHHHHHHhCCCC----CCCCEEEEEECCc-eeEE
Confidence 54432 23332 24568888999999999887655544432 2211 2345899999988 4555
Q ss_pred EeeCCeEEE
Q 007976 159 IGKRGKVVF 167 (582)
Q Consensus 159 ~~~~~~~~~ 167 (582)
++-+|++..
T Consensus 140 ii~~g~l~~ 148 (302)
T 3vov_A 140 VVLGGRVLR 148 (302)
T ss_dssp EEETTEECC
T ss_pred EEECCEEee
Confidence 556777653
No 93
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=69.31 E-value=11 Score=41.15 Aligned_cols=74 Identities=14% Similarity=0.233 Sum_probs=43.7
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeee---eccCCCcCCCCCHH-HHHHHHHHHHHHHHHHHHcCCCCcc
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVI---LGRDLSSSCSISTQ-SQARSVESLLMFRDIIQSHNISRDH 88 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vr---Lg~g~~~~g~Ls~e-~i~r~~~~L~~f~~~~~~~~v~~~~ 88 (582)
+++..||+|+.|+|..+++. +|++ +...+.+.. ...|-. .-+++ -.+.+++++++. +++.+++..+
T Consensus 5 ~~~lgIDiGtts~ka~l~d~--~G~i--l~~~~~~~~~~~p~~g~~---eqdp~~~~~~~~~~i~~~---~~~~~~~~~~ 74 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDL--QGRM--VGQASREITMFKPKADFV---EQSSENIWQAVCNAVRDA---VNQADINPIQ 74 (554)
T ss_dssp CEEEEEEECSSEEEEEEEET--TSCE--EEEEEEECCCEEEETTEE---EECHHHHHHHHHHHHHHH---HHHHTCCGGG
T ss_pred cEEEEEEECcccEEEEEECC--CCCE--EEEEEEecccccCCCCcc---ccCHHHHHHHHHHHHHHH---HHHcCCCHhH
Confidence 57899999999999999973 5653 433333322 111211 12333 345555555544 4455776667
Q ss_pred EEEEEehh
Q 007976 89 TRAVATAA 96 (582)
Q Consensus 89 i~~vATsA 96 (582)
|.+|+-++
T Consensus 75 I~~Igis~ 82 (554)
T 3l0q_A 75 VKGLGFDA 82 (554)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEcC
Confidence 88888655
No 94
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=69.27 E-value=82 Score=30.17 Aligned_cols=136 Identities=17% Similarity=0.205 Sum_probs=78.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEE-eeeeeeeeccCCCcCCCCC-HHHHHHHHHHHHHHHHHHHHcC-CCCccEE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTID-TLKQPVILGRDLSSSCSIS-TQSQARSVESLLMFRDIIQSHN-ISRDHTR 90 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~-~~k~~vrLg~g~~~~g~Ls-~e~i~r~~~~L~~f~~~~~~~~-v~~~~i~ 90 (582)
++..||||.+++++.+++.. +|. ++. +.+.++. . ..+ ++.++...+.++++.+ +.+ .+...-.
T Consensus 13 ~~lgidiggt~i~~~l~dl~-~g~--i~~~~~~~~~~--~------~~~~~~~~~~i~~~i~~~~~---~~~~~~~~~~i 78 (267)
T 1woq_A 13 PLIGIDIGGTGIKGGIVDLK-KGK--LLGERFRVPTP--Q------PATPESVAEAVALVVAELSA---RPEAPAAGSPV 78 (267)
T ss_dssp CEEEEEECSSEEEEEEEETT-TTE--EEEEEEEEECC--S------SCCHHHHHHHHHHHHHHHHT---STTCCCTTCCE
T ss_pred EEEEEEECCCEEEEEEEECC-CCe--EEEEEEecCCC--c------cCCHHHHHHHHHHHHHHHHH---hccccCccceE
Confidence 47889999999999999764 243 332 2222221 1 112 3445555555665543 111 1111224
Q ss_pred EEEehhh------hhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHHh--hhhccCCCCCCceEEEEeCCCceE
Q 007976 91 AVATAAV------RAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVYM--GVLQFLPVFDRLVLSVDIGGGSTE 156 (582)
Q Consensus 91 ~vATsA~------R~A~N~------~~fl~~I~~~tG~~i~VIsgeEEA~l~~~--gv~~~l~~~~~~~lviDIGGGStE 156 (582)
++|.... ..+.|- -.+.+.+++++|++|.+.+.-.=|-+.-. |.... .+.+.+++-+|.| +-
T Consensus 79 gi~~pG~v~~g~v~~~~~l~~~w~~~~l~~~l~~~~~~pV~v~NDanaaalaE~~~g~~~~---~~~~~~~l~~GtG-IG 154 (267)
T 1woq_A 79 GVTFPGIIQHGVVHSAANVDKSWLNTDIDALLTARLGRPVEVINDADAAGLAEARYGAGAG---VKGTVLVITLGTG-IG 154 (267)
T ss_dssp EEEESSCEETTEECCCTTSCGGGTTCBHHHHHHHHHTSCEEEEEHHHHHHHHHHHHSTTTT---CCSEEEEEEESSS-EE
T ss_pred EEEccceEcCCEEEeCCCCCCCCCCCCHHHHHHHHHCCCEEEeehhHHHHHHHHHhCCCCC---CCCcEEEEEECcc-eE
Confidence 5665433 333342 34668888999999999887766665532 22211 1124678899987 77
Q ss_pred EEEeeCCeEEE
Q 007976 157 FVIGKRGKVVF 167 (582)
Q Consensus 157 l~~~~~~~~~~ 167 (582)
..++-+|++..
T Consensus 155 ~giv~~G~l~~ 165 (267)
T 1woq_A 155 SAFIFDGKLVP 165 (267)
T ss_dssp EEEEETTEEET
T ss_pred EEEEECCEEcc
Confidence 77778887764
No 95
>3mem_A Putative signal transduction protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.25A {Marinobacter aquaeolei}
Probab=68.98 E-value=18 Score=38.41 Aligned_cols=43 Identities=21% Similarity=0.059 Sum_probs=28.8
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhcccccCC
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSK 417 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~~ 417 (582)
.|+..|+.+|..|- ...+... ..+...+..|++|||||+-+=.
T Consensus 281 ~hs~~~A~~a~~LA----~~~~~~~----------~~~~~~aflaGLLhDIGkl~l~ 323 (457)
T 3mem_A 281 QQAIWQAQSAGILA----SMMPRGQ----------RPLFGLAYLAGLLHNFGHLVLA 323 (457)
T ss_dssp HHHHHHHHHHHHHH----HHSCGGG----------CCCHHHHHHHHHHTTTHHHHHH
T ss_pred HHHHHHHHHHHHHH----Hhccccc----------CCCHHHHHHHHHHHHhhHHHHH
Confidence 68889999888653 3333210 1123568899999999987743
No 96
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=68.00 E-value=43 Score=32.54 Aligned_cols=124 Identities=14% Similarity=0.081 Sum_probs=74.0
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEe
Q 007976 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (582)
Q Consensus 15 ~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (582)
+..||||...+++.+++. +|. ++.+.+.++. .+.+ ..++.+.++. ++..+ .-.++|.
T Consensus 6 ~lgidiggt~i~~~l~d~--~g~--il~~~~~~~~----------~~~~---~~~~~i~~~i---~~~~i---~gigi~~ 62 (292)
T 2gup_A 6 IATIDIGGTGIKFASLTP--DGK--ILDKTSISTP----------ENLE---DLLAWLDQRL---SEQDY---SGIAMSV 62 (292)
T ss_dssp EEEEEEETTEEEEEEECT--TCC--EEEEEEECCC----------SSHH---HHHHHHHHHH---TTSCC---SEEEEEE
T ss_pred EEEEEECCCEEEEEEECC--CCC--EEEEEEEeCC----------CCHH---HHHHHHHHHH---HhCCC---cEEEEEe
Confidence 688999999999999964 454 4444433321 1222 2333333332 22233 2356666
Q ss_pred hhhhh--------cCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEee
Q 007976 95 AAVRA--------AENK-----DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGK 161 (582)
Q Consensus 95 sA~R~--------A~N~-----~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~ 161 (582)
...-+ +.|- -.+.+.+ +++|++|.+.+.-.=|-+.-.- ... ..++.+++-+|.| +-..+.-
T Consensus 63 pG~vd~~~g~v~~~~~~~~~~~~~l~~~l-~~~~~pv~v~NDa~aaa~~e~~--~~~--~~~~~v~l~~GtG-iG~giv~ 136 (292)
T 2gup_A 63 PGAVNQETGVIDGFSAVPYIHGFSWYEAL-SSYQLPVHLENDANCVGLSELL--AHP--ELENAACVVIGTG-IGGAMII 136 (292)
T ss_dssp SSEECTTTCBEESCCSSGGGSSSBHHHHT-GGGCCCEEEEEHHHHHHHHHHH--HCT--TCSSEEEEEESSS-EEEEEEE
T ss_pred cCcccCCCCEEEecCCCCcccCCCHHHHH-HHcCCCEEEechHHHHHHHHHH--hcC--CCCeEEEEEECCc-eEEEEEE
Confidence 55422 3332 2466778 8899999998877666555432 211 2346899999998 5666777
Q ss_pred CCeEEE
Q 007976 162 RGKVVF 167 (582)
Q Consensus 162 ~~~~~~ 167 (582)
+|++..
T Consensus 137 ~G~l~~ 142 (292)
T 2gup_A 137 NGRLHR 142 (292)
T ss_dssp TTEEEC
T ss_pred CCEEEe
Confidence 887764
No 97
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=66.28 E-value=12 Score=40.20 Aligned_cols=72 Identities=15% Similarity=0.180 Sum_probs=39.4
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCC--CCHHH-HHHHHHHHHHHHHHHHHcCCCCccE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCS--ISTQS-QARSVESLLMFRDIIQSHNISRDHT 89 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~--Ls~e~-i~r~~~~L~~f~~~~~~~~v~~~~i 89 (582)
+++..||+|+.|+|..+++. +|+ ++...+.+... .....|. -.++. .+.+++++++. +++.+ .+|
T Consensus 4 ~~~lgIDiGtts~K~~l~d~--~G~--il~~~~~~~~~--~~p~~g~~e~dp~~~~~~~~~~i~~~---~~~~~---~~I 71 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDI--NGK--AVASVSKGYPL--IQTKVGQAEEDPKLIFDAVQEIIFDL---TQKID---GKI 71 (504)
T ss_dssp EEEEEEEECSSEEEEEEEET--TSC--EEEEEEEECCC--BCSSTTCCEECHHHHHHHHHHHHHHH---HHTCS---SEE
T ss_pred CEEEEEEecCCceEEEEEcC--CCC--EEEEEEeecce--ecCCCCcEEECHHHHHHHHHHHHHHH---HHhCC---CCe
Confidence 57899999999999999974 454 34444333322 1112221 23333 33444455443 44433 357
Q ss_pred EEEEehh
Q 007976 90 RAVATAA 96 (582)
Q Consensus 90 ~~vATsA 96 (582)
.+|+-++
T Consensus 72 ~~Igis~ 78 (504)
T 3ll3_A 72 AAISWSS 78 (504)
T ss_dssp EEEEEEE
T ss_pred EEEEEEC
Confidence 7776433
No 98
>3m5f_A Metal dependent phosphohydrolase; CAS3, prokaryotic immune system, HD-motif, structural genomics, PSI-2; 2.30A {Methanocaldococcus jannaschii} PDB: 3s4l_A
Probab=64.97 E-value=7.7 Score=37.58 Aligned_cols=58 Identities=17% Similarity=0.115 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHhhcccccC--------------CCCchhhhHHHHHcCCCCCCCCHHH-HhhhhhHHHHHHHHHhhcCCC
Q 007976 398 DLEYLEAACLLHNIGHFTS--------------KKGYHKQSCHIIMNGDHLYGYSTDE-IKHLVCLQLIALLTRFHRKKF 462 (582)
Q Consensus 398 ~~~LL~~Aa~LHdIG~~I~--------------~~~h~kHS~yiI~ns~~l~G~s~~E-~~~~~~~~~iA~iaryhrk~~ 462 (582)
.+.++.+||+|||+|+.-. ...|.--|++++...- ......++ .. ++++.+.+|.+..
T Consensus 55 ~~~ll~~a~llHDiGKa~~~FQ~k~l~~~~~~~~~~He~lSa~fl~~~l-~~~~~~~~la~------lialAI~sHH~~l 127 (244)
T 3m5f_A 55 VDEFMKILIKLHDIGKASKIYQRAIINDQEKLMGFRHELVSAYYTYHIL-LKKFGDKNLAF------IGALTVMLHHEPI 127 (244)
T ss_dssp HHHHHHHHHHHTTGGGGBHHHHHHHHCTTSCCSSCCHHHHHHHHHHHHH-HHHHCCHHHHH------HHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHcccccCCHHHHHHHHhccCCCCCCChHHHHHHHHHHHH-hhccchHHHHH------HHHHHHHHhCHHH
Confidence 3578999999999998521 3355556666664431 11112233 34 6677666776655
No 99
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=64.83 E-value=14 Score=39.56 Aligned_cols=74 Identities=9% Similarity=0.128 Sum_probs=41.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CHH-HHHHHHHHHHHHHHHHHHcCCCCccEE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--STQ-SQARSVESLLMFRDIIQSHNISRDHTR 90 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~L--s~e-~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (582)
++.+||+|+.|+|..+++. +|. ++.+.+.+...- ....|.. .++ -.+.+++++++. +++.+++..+|.
T Consensus 3 ~~lgiDiGtT~~k~~l~d~--~g~--i~~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~---~~~~~~~~~~i~ 73 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTL--EGR--PVAVAKREFRQL--YPKPGWVEHDPLEIWETTLWAAREV---LRRAGAEAGEVL 73 (495)
T ss_dssp CEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCEE--CSSTTCCEECHHHHHHHHHHHHHHH---HHHTTCCGGGCC
T ss_pred EEEEEeeCCcceEEEEECC--CCC--EEEEEEEeecee--cCCCCcEeeCHHHHHHHHHHHHHHH---HHhcCCCcccEE
Confidence 5789999999999999963 454 444444443221 1122222 233 344555555544 445566545566
Q ss_pred EEEehh
Q 007976 91 AVATAA 96 (582)
Q Consensus 91 ~vATsA 96 (582)
+|+-++
T Consensus 74 ~Igis~ 79 (495)
T 2dpn_A 74 ALGITN 79 (495)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 666443
No 100
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=64.52 E-value=8.5 Score=42.10 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=41.6
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeec---cCCCc------CC--CCCHHHH-HHHHHHHHHHHHHHH
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILG---RDLSS------SC--SISTQSQ-ARSVESLLMFRDIIQ 80 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg---~g~~~------~g--~Ls~e~i-~r~~~~L~~f~~~~~ 80 (582)
+++..||+||.|+|.++++.. +|++ +.....+...+ ..... .| .-.++.+ +.+++++++. ++
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~-~G~i--~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~---l~ 78 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLS-NGQE--LADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAV---MK 78 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETT-TCCE--EEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHH---HH
T ss_pred CEEEEEecCCcceEEEEEECC-CCeE--EEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHH---HH
Confidence 568899999999999999752 5653 43333332210 00000 11 2234444 5555566554 44
Q ss_pred HcCCCCccEEEEEehh
Q 007976 81 SHNISRDHTRAVATAA 96 (582)
Q Consensus 81 ~~~v~~~~i~~vATsA 96 (582)
+.+++..+|.+|+-++
T Consensus 79 ~~~~~~~~I~~Igis~ 94 (572)
T 3jvp_A 79 ESGVDADDVIGIGVDF 94 (572)
T ss_dssp C---CCSCEEEEEEEE
T ss_pred HcCCChhHEEEEEEec
Confidence 4466556788877443
No 101
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=63.23 E-value=25 Score=37.68 Aligned_cols=76 Identities=17% Similarity=0.172 Sum_probs=44.4
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHcCCCCccEE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHTR 90 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~L--s~-e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (582)
++.+||+|+.|+|..+++. +|. ++.+.+.+...- ....|.. .+ +-.+.+++++++ ++++.+++..+|.
T Consensus 3 ~~lgiDiGtts~k~~l~d~--~G~--i~~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~---~~~~~~~~~~~i~ 73 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH--SGE--IYSTGQLEHDQI--FPRAGWVEHNPEQIWNNVREVVGL---ALTRGNLTHEDIA 73 (504)
T ss_dssp EEEEEEECSSEEEEEEECT--TSC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHH---HHHHTTCCGGGEE
T ss_pred EEEEEecCCcceEEEEECC--CCC--EEEEEEEeccee--cCCCCceeECHHHHHHHHHHHHHH---HHHHcCCCcccEE
Confidence 5789999999999999964 454 454444443221 1222322 23 334555555554 4455666555788
Q ss_pred EEEehhhh
Q 007976 91 AVATAAVR 98 (582)
Q Consensus 91 ~vATsA~R 98 (582)
+|+-++-+
T Consensus 74 ~Igis~~g 81 (504)
T 2d4w_A 74 AVGITNQR 81 (504)
T ss_dssp EEEEEECS
T ss_pred EEEEeCCC
Confidence 88755443
No 102
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=61.89 E-value=33 Score=33.62 Aligned_cols=129 Identities=11% Similarity=0.128 Sum_probs=67.7
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEe
Q 007976 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (582)
Q Consensus 15 ~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (582)
+-+||||-.++++-+++ ++ +++...+.++. . -+.+.+ ...++++++.++.+..++..++=
T Consensus 4 lL~IDIGNT~iK~gl~d---~~--~l~~~~r~~T~-~--------~t~de~------~~~l~~ll~~~~~~~~~I~~iiI 63 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFD---GD--EIKLRFRHTSK-V--------STSDEL------GIFLKSVLRENNCSPETIRKIAI 63 (266)
T ss_dssp EEEEEECSSEEEEEEEE---TT--EEEEEEEEECS-C--------CCHHHH------HHHHHHHHHTTTCCGGGCCEEEE
T ss_pred EEEEEECCCeEEEEEEE---CC--EEEEEEEecCC-C--------CCHHHH------HHHHHHHHHHcCCChhhceEEEE
Confidence 67999999999999995 23 45555544432 1 122322 23345556667765444544443
Q ss_pred hhhhhcCChHHHHHHHHHHcCCcEEEeChHHH----------------HHHHHhhhhccCCCCCCceEEEEeCCCceEEE
Q 007976 95 AAVRAAENKDEFVECVREKVGFEVDVLTGEQE----------------AKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (582)
Q Consensus 95 sA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEE----------------A~l~~~gv~~~l~~~~~~~lviDIGGGStEl~ 158 (582)
|.+.-. -...+...+++..+.++.+++.... --....|+.... +..+.+|+|.|..-|==.
T Consensus 64 SSVvp~-~~~~l~~~~~~~~~~~~~~v~~~~~~g~~~~y~~P~~lG~DR~~~~vaA~~~~--~~~~~iVVD~GTA~T~d~ 140 (266)
T 3djc_A 64 CSVVPQ-VDYSLRSACVKYFSIDPFLLQAGVKTGLNIKYRNPVEVGADRIANAIAATHSF--PNQNIIVIDFGTATTFCA 140 (266)
T ss_dssp EESCHH-HHHHHHHHHHHHTCCCCEECCSSSCCCCEECCSSGGGSCHHHHHHHHHHHHHS--TTSEEEEEEESSEEEEEE
T ss_pred ecchHh-HHHHHHHHHHHHcCCCeEEEcCCCCCCcccCCCChhhhHHHHHHHHHHHHHhc--CCCCEEEEECCCeeEEEE
Confidence 333221 1223444455556777777662211 012222332222 234689999999887323
Q ss_pred EeeCCeEE
Q 007976 159 IGKRGKVV 166 (582)
Q Consensus 159 ~~~~~~~~ 166 (582)
+-.+|...
T Consensus 141 v~~~g~~l 148 (266)
T 3djc_A 141 ISHKKAYL 148 (266)
T ss_dssp ECTTSEEE
T ss_pred EcCCCcEE
Confidence 33345544
No 103
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=60.16 E-value=12 Score=40.07 Aligned_cols=24 Identities=21% Similarity=0.320 Sum_probs=18.9
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCE
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKF 38 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~ 38 (582)
+++.+||+|+.|+|..+++ .+|++
T Consensus 6 ~~~lgIDiGTts~Ka~l~d--~~G~i 29 (482)
T 3h6e_A 6 GATIVIDLGKTLSKVSLWD--LDGRM 29 (482)
T ss_dssp --CEEEEECSSEEEEEEEC--TTSCE
T ss_pred ceEEEEEcCCCCeEEEEEE--CCCcE
Confidence 4688999999999999997 35654
No 104
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=58.25 E-value=42 Score=32.81 Aligned_cols=126 Identities=13% Similarity=0.080 Sum_probs=67.9
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeee-eeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 007976 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPV-ILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (582)
Q Consensus 15 ~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~v-rLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (582)
+..||+|..++|..+++ + |. ++.+.+.+. .... .+ .++.+++..+++++.. ....+. -.+++
T Consensus 2 ~lgiDiGGT~i~~~l~d-~--g~--il~~~~~~~~~~~~----~~--~~~~~~~i~~~i~~~~---~~~~i~---~igig 64 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL-N--GA--VIKRLGTKGINPFF----QS--EEEIQQKLTASLLPQL---PEGKFN---AVYFY 64 (291)
T ss_dssp --CEECCTTCEEEEEEC-S--SS--EEEEEEECCCCTTT----SC--STTTTTTTTC-------------------CEEE
T ss_pred EEEEEeccccEEEEEEc-C--Ce--EEEEEECCCCCccc----CC--HHHHHHHHHHHHHHhc---Cccccc---EEEEE
Confidence 46899999999999996 3 43 444433221 1100 00 0112222222232221 111231 24566
Q ss_pred ehhhhhcCChHHHHHHHHHHcCC--cEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCceEEEEeeCCeEE
Q 007976 94 TAAVRAAENKDEFVECVREKVGF--EVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFVIGKRGKVV 166 (582)
Q Consensus 94 TsA~R~A~N~~~fl~~I~~~tG~--~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGStEl~~~~~~~~~ 166 (582)
+..+- ..++..+.+.+++.++. ++.|-+.-.=|.+.-. . .++++++=+|.||.-..+..+|++.
T Consensus 65 ~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~------g--~~~~v~v~~GTGi~g~gi~~~G~~~ 130 (291)
T 1zxo_A 65 GAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC------G--QKAGIACILGTGSNSCFYNGKEIVS 130 (291)
T ss_dssp CTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT------T--TSCBEEEEESSSEEEEEECSSSEEE
T ss_pred cCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc------C--CCCcEEEEeCCChheEEECCCCcEE
Confidence 77653 45556788888999994 9999887766555432 1 2346777899999655555677764
No 105
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=58.10 E-value=25 Score=37.61 Aligned_cols=75 Identities=8% Similarity=-0.048 Sum_probs=42.3
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHc--CCCCc
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSH--NISRD 87 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~L--s~-e~i~r~~~~L~~f~~~~~~~--~v~~~ 87 (582)
+++.+||||+.++|..+++. +|. ++.+.+.+...- ....|.. .+ +-.+.+++++++..+ +. +++..
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~--~g~--i~~~~~~~~~~~--~~~~g~~e~d~~~~~~~i~~~i~~~~~---~~~~~~~~~ 74 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDE--ELN--IVHSNNLNHEQK--CLKPGWYEHDPIEIMTNLYNLMNEGIK---VLKDKYTSV 74 (503)
T ss_dssp EEEEEEEECSSEEEEEEEET--TCC--EEEEEEEECCCB--CCSTTCCEECHHHHHHHHHHHHHHHHH---HHHHHSSSC
T ss_pred cEEEEEEeCCcceEEEEECC--CCC--EEEEEEEeeeee--cCCCCcEEECHHHHHHHHHHHHHHHHH---HhhcCCCcc
Confidence 36889999999999999974 454 454444443321 1122221 23 334555566665433 33 34434
Q ss_pred cEEEEEehh
Q 007976 88 HTRAVATAA 96 (582)
Q Consensus 88 ~i~~vATsA 96 (582)
+|.+|+-++
T Consensus 75 ~i~~Igis~ 83 (503)
T 2w40_A 75 IIKCIGITN 83 (503)
T ss_dssp EEEEEEEEE
T ss_pred ceEEEEEcC
Confidence 677776444
No 106
>3kq5_A Hypothetical cytosolic protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Coxiella burnetii}
Probab=55.74 E-value=8.6 Score=39.75 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=27.4
Q ss_pred hhHHH-HHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhccccc
Q 007976 361 KAGAQ-CASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (582)
Q Consensus 361 ~ha~~-V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I 415 (582)
+|.-. |+++|.++-+. +.. ..+-++.++-+||+|||||+-+
T Consensus 78 eHtLerVa~~A~~l~~~----YP~----------~~~~Er~~l~~aALLHDIGKl~ 119 (393)
T 3kq5_A 78 NEGLLRGVNSLNHYIQN----HPE----------ATPLERYALFSAGLLLEVAHAV 119 (393)
T ss_dssp HHHHHHHHHHHHHHHHH----CTT----------CCHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHh----CCC----------CCchHHHHHHHHHHHhccchhe
Confidence 46666 77778775433 311 1112378999999999999884
No 107
>2ibn_A Inositol oxygenase; reductase, DIIRON, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: MSE I1N; 1.50A {Homo sapiens} SCOP: a.211.1.4
Probab=54.49 E-value=4.7 Score=38.86 Aligned_cols=25 Identities=20% Similarity=0.395 Sum_probs=20.6
Q ss_pred HHHHHHHHHhhcccccCCCCchhhh
Q 007976 400 EYLEAACLLHNIGHFTSKKGYHKQS 424 (582)
Q Consensus 400 ~LL~~Aa~LHdIG~~I~~~~h~kHS 424 (582)
..+.+||+|||+|.-+...+|.+|.
T Consensus 79 dw~~laaLlHDLGkll~~~~~~qW~ 103 (250)
T 2ibn_A 79 DWFHLVGLLHDLGKVLALFGEPQWA 103 (250)
T ss_dssp HHHHHHHHHTTGGGHHHHTTCCGGG
T ss_pred hHHHHHHHHhccHhhhcccCCcchh
Confidence 5799999999999988777776553
No 108
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=52.38 E-value=63 Score=33.06 Aligned_cols=133 Identities=16% Similarity=0.111 Sum_probs=72.1
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEee-eeeeeeccCCCcCCCCCHH-HHHHHHH---HHHHHHHHHHHcCCCCc
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTL-KQPVILGRDLSSSCSISTQ-SQARSVE---SLLMFRDIIQSHNISRD 87 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~-k~~vrLg~g~~~~g~Ls~e-~i~r~~~---~L~~f~~~~~~~~v~~~ 87 (582)
.++..||||.+.+++.+++ . | +++.+. +.++.- . +++ .++...+ .++++. . ..+
T Consensus 9 ~~~lgiDIGgt~i~~~l~d-~--G--~il~~~~~~~~~~--------~-~~~~~l~~i~~~~~~i~~~~---~-~~i--- 67 (366)
T 3mcp_A 9 RIVMTLDAGGTNFVFSAIQ-G--G--KEIADPVVLPACA--------D-CLDKCLGNLVEGFKAIQAGL---P-EAP--- 67 (366)
T ss_dssp CEEEEEECSSSEEEEEEEE-T--T--EECSCCEEEECCT--------T-CHHHHHHHHHHHHHHHHTTC---S-SCC---
T ss_pred CEEEEEEECcceEEEEEEE-C--C--EEEEEEEEEECCC--------C-CHHHHHHHHHHHHHHHHHHh---h-cCC---
Confidence 5678999999999999997 3 4 344443 333211 1 232 3333333 222221 1 122
Q ss_pred cEEEEEehh--------hhhcCCh------HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhc---------cCCCCC
Q 007976 88 HTRAVATAA--------VRAAENK------DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQ---------FLPVFD 142 (582)
Q Consensus 88 ~i~~vATsA--------~R~A~N~------~~fl~~I~~~tG~~i~VIsgeEEA~l~~--~gv~~---------~l~~~~ 142 (582)
.-..||... +..+.|- -.+.+.+++++|++|.+.+.-.=+-+.- .|... .-....
T Consensus 68 ~gIGIavPG~Vd~~~G~i~~~~nlp~w~~~~~l~~~L~~~~g~PV~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~ 147 (366)
T 3mcp_A 68 VAISFAFPGPADYQAGIIGDLPNFPSFRGGVALGPFLEDIFGIPVFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRY 147 (366)
T ss_dssp CEEEEECCSSEETTTTEECCCTTCGGGTTCBCHHHHHHHHHCSCEEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCC
T ss_pred eEEEEEecceEeCCCCEEEeCCCcccccCCCCHHHHHHHHHCCCEEEechhhHHHHHHHHhCCCcccccccccccccCCC
Confidence 124455433 2334453 2456788999999999998766555442 23000 011123
Q ss_pred CceEEEEeCCCceEEEEeeCCeEEE
Q 007976 143 RLVLSVDIGGGSTEFVIGKRGKVVF 167 (582)
Q Consensus 143 ~~~lviDIGGGStEl~~~~~~~~~~ 167 (582)
++.+++-+|.| +--.++-+|++..
T Consensus 148 ~~~v~l~lGtG-IG~givi~G~l~~ 171 (366)
T 3mcp_A 148 KNLLGVTLGTG-FGAGVVIDGELLR 171 (366)
T ss_dssp CEEEEEEESSS-EEEEEEETTEECC
T ss_pred CcEEEEEECCc-ceEEEEECCEEec
Confidence 46788888876 4444555777653
No 109
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=49.61 E-value=1.6e+02 Score=28.53 Aligned_cols=127 Identities=19% Similarity=0.224 Sum_probs=71.6
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCCccEEEE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSH-NISRDHTRAV 92 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~-~v~~~~i~~v 92 (582)
++..||||.+++++.+++. +|. ++.+.+.++. .. ++ +..++.+..+ +++. .+ .-..|
T Consensus 5 ~~lgiDiGgt~i~~~l~d~--~G~--il~~~~~~~~------~~---~~---~~~~~~i~~~---~~~~~~i---~gigi 62 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLP--HGE--IILTKSAEIS------GS---DG---DQILAEMKVF---LAENTDV---TGIAV 62 (297)
T ss_dssp CEEEEEECSSEEEEEEECT--TSC--EEEEEEEECS------TT---CH---HHHHHHHHHH---HHTCTTC---CEEEE
T ss_pred EEEEEEeCCCeEEEEEECC--CCC--EEEEEEecCC------CC---CH---HHHHHHHHHH---HhhcCCe---eEEEE
Confidence 3789999999999999964 454 4444443321 10 12 2233333332 2222 22 12445
Q ss_pred Eehhh--------hhcCCh-----HHHHHHHHHHcCCcEEEeChHHHHHHHH--hhhhccCCCCCCceEEEEeCCCceEE
Q 007976 93 ATAAV--------RAAENK-----DEFVECVREKVGFEVDVLTGEQEAKFVY--MGVLQFLPVFDRLVLSVDIGGGSTEF 157 (582)
Q Consensus 93 ATsA~--------R~A~N~-----~~fl~~I~~~tG~~i~VIsgeEEA~l~~--~gv~~~l~~~~~~~lviDIGGGStEl 157 (582)
|.... ..+.|- -.+.+.+++++|++|.+.+.-.=+-+.- .|... ..++.+++-+|.| +--
T Consensus 63 ~~pG~vd~~~g~v~~~~~l~~w~~~~l~~~l~~~~~~pV~v~NDa~aaal~E~~~g~~~----~~~~~~~l~~GtG-iG~ 137 (297)
T 4htl_A 63 SAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQ----DLDDFLCLTIGTG-IGG 137 (297)
T ss_dssp EESSEECTTTCEEEECTTCGGGTTEEHHHHHHHHHCSCEEEEEHHHHHHHHHHHHSTTT----TCSSEEEEEESSS-EEE
T ss_pred ecCcceeCCCCEEEeCCCCCCccCCCHHHHHHHHHCcCEEEecHHHHHHHHHHHhCCCC----CCCcEEEEEECcc-eEE
Confidence 54332 223332 2467788899999999988755544432 23221 2245899999988 455
Q ss_pred EEeeCCeEEE
Q 007976 158 VIGKRGKVVF 167 (582)
Q Consensus 158 ~~~~~~~~~~ 167 (582)
.++-+|++..
T Consensus 138 giv~~G~l~~ 147 (297)
T 4htl_A 138 GIFSNGELVR 147 (297)
T ss_dssp EEEETTEECC
T ss_pred EEEECCEEEe
Confidence 5666787764
No 110
>3aql_A Poly(A) polymerase; transferase/RNA, ATP-binding, nucleotide-binding, RNA-bindin transferase, nucleotidyltransferase, ATP binding, A-phospho; 3.00A {Escherichia coli} PDB: 3aqn_A* 3aqk_A 3aqm_A
Probab=48.92 E-value=12 Score=39.24 Aligned_cols=55 Identities=4% Similarity=-0.026 Sum_probs=37.4
Q ss_pred HHHHHHHHHh-hcccccC-------C---CCchhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcC
Q 007976 400 EYLEAACLLH-NIGHFTS-------K---KGYHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRK 460 (582)
Q Consensus 400 ~LL~~Aa~LH-dIG~~I~-------~---~~h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk 460 (582)
.+|.+||+|| |||.... . ..|..-+..++..--...|++.++.. .++.++..|..
T Consensus 287 ~~L~lAALLH~di~K~~~~~~~~~G~~~~~~h~~~ga~~a~~~~~rl~l~~r~~~------~v~~lv~lq~r 352 (415)
T 3aql_A 287 PAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTT------LTRDIWQLQLR 352 (415)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCCCHHHHH------HHHHHHHHHHH
T ss_pred HHHHHhHhcCcchhhhhhhhhhccCCCchHHHHHHHHHHHHHHHHHcCCCHHHHH------HHHHHHHHHHH
Confidence 5788999999 9998531 1 23444456665432225799999999 77777776643
No 111
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=48.79 E-value=14 Score=32.88 Aligned_cols=86 Identities=15% Similarity=0.220 Sum_probs=56.5
Q ss_pred eEEEEEecccceEEEEEEEeCCCC-EEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGK-FLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAV 92 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~-~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~v 92 (582)
++-.||.|+..+-+.|.+. .|. ..++. +++-.. .|.-...+.+.+++++|++ ...+|
T Consensus 4 riLGiDpG~~riGvAv~d~--~g~~a~p~~----~I~~~~-------------~r~~~~~~~l~~li~~~~~---~~ivV 61 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE--MGWTAQGIE----TIKINE-------------AEGDYGLSRLSELIKDYTI---DKIVL 61 (150)
T ss_dssp EEEEEEECSSEEEEEEECT--TSSSEEEEE----EEECBG-------------GGTBCCHHHHHHHHTTSEE---EEEEE
T ss_pred EEEEEEccCCEEEEEEEEC--CCCEEeeEE----EEEcCC-------------cchHHHHHHHHHHHHHcCC---CEEEE
Confidence 4789999999999998864 343 22222 121111 0222356777888888887 35778
Q ss_pred E-------ehhhhhcCChHHHHHHHHHHcCCcEEEeC
Q 007976 93 A-------TAAVRAAENKDEFVECVREKVGFEVDVLT 122 (582)
Q Consensus 93 A-------TsA~R~A~N~~~fl~~I~~~tG~~i~VIs 122 (582)
+ |+ -+.+.-.+.|+.++..+.+++|...|
T Consensus 62 GlP~~~nGt~-~~~~~~ar~f~~~L~~~~~lpV~~vD 97 (150)
T 1vhx_A 62 GFPKNMNGTV-GPRGEASQTFAKVLETTYNVPVVLWD 97 (150)
T ss_dssp ECCCCBTTBC-CHHHHHHHHHHHHHHHHHCSCEEEEC
T ss_pred eeeecCCcch-hHHHHHHHHHHHHHHHhhCCCEEEec
Confidence 7 33 34555567899999888899998854
No 112
>2cqz_A 177AA long hypothetical protein; hypothetical proteins, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.60A {Pyrococcus horikoshii}
Probab=47.55 E-value=19 Score=32.88 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=27.2
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhccccc
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFT 415 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I 415 (582)
.|+-+|+.+|..|-+.++.. +. +. +...+..+|+|||++-.+
T Consensus 35 eHs~rVa~~A~~la~~~~~~-~~---------~~---d~~~v~~~aLlHD~~E~~ 76 (177)
T 2cqz_A 35 DHSFGVAFITLVLADVLEKR-GK---------RI---DVEKALKMAIVHDLAEAI 76 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TC---------CC---CHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHc-CC---------CC---CHHHHHHHHHHhchHHHH
Confidence 79999999998875543221 11 11 224456899999997443
No 113
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=45.83 E-value=83 Score=30.65 Aligned_cols=129 Identities=10% Similarity=0.141 Sum_probs=66.2
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEe
Q 007976 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (582)
Q Consensus 15 ~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (582)
+-+||||-..+++-+++ ++. ++...+.. .. ..-+.+.. ...+.++++.++++..++..++=
T Consensus 2 lL~IDIGNT~ik~gl~~---~~~--l~~~~r~~----T~----~~~t~de~------~~~l~~ll~~~~~~~~~i~~iiI 62 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFE---EGE--LRQHWRME----TD----RHKTEDEY------GMLVKQLLEHEGLSFEDVKGIIV 62 (268)
T ss_dssp EEEEEECSSEEEEEEEE---TTE--EEEEEEEE----CC----TTCCHHHH------HHHHHHHHHHTTCCGGGCCEEEE
T ss_pred EEEEEECcCcEEEEEEE---CCE--EEEEEEec----CC----CcCCHHHH------HHHHHHHHHHcCCCcccCcEEEE
Confidence 45899999999999996 232 33333222 11 11223322 22344555666654333333333
Q ss_pred hhhhhcCChHHHHHHHHHHcCCcEEEeChHHH----------------HHHHHhhhhccCCCCCCceEEEEeCCCceEEE
Q 007976 95 AAVRAAENKDEFVECVREKVGFEVDVLTGEQE----------------AKFVYMGVLQFLPVFDRLVLSVDIGGGSTEFV 158 (582)
Q Consensus 95 sA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEE----------------A~l~~~gv~~~l~~~~~~~lviDIGGGStEl~ 158 (582)
|.+.- .-...+.+.+++..+.++.+++.... --....|+....+ .+.+|||.|..-|==.
T Consensus 63 SSVvp-~~~~~l~~~~~~~~~~~~~~v~~~~~~gl~~~y~~P~~lG~DR~~~~vaA~~~~~---~~~iVVD~GTAtT~d~ 138 (268)
T 2h3g_X 63 SSVVP-PIMFALERMCEKYFKIKPLVVGPGIKTGLNIKYENPREVGADRIVNAVAGIHLYG---SPLIIVDFGTATTYCY 138 (268)
T ss_dssp EESCH-HHHHHHHHHHHHHTCCCCEECSTTCCCCCEECSSCGGGSCHHHHHHHHHHHHHHC---SSEEEEEESSEEEEEE
T ss_pred EccCh-hHHHHHHHHHHHHhCCCeEEEcCCCCCCccccCCChhhcCHHHHHHHHHHHHhcC---CCEEEEECCCceEEEE
Confidence 33321 11234555566667888877742211 0122233332222 4689999999888433
Q ss_pred EeeCCeEE
Q 007976 159 IGKRGKVV 166 (582)
Q Consensus 159 ~~~~~~~~ 166 (582)
+-.+|...
T Consensus 139 v~~~g~~l 146 (268)
T 2h3g_X 139 INEEKHYM 146 (268)
T ss_dssp ECTTSEEE
T ss_pred ECCCCcEE
Confidence 33555554
No 114
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=45.60 E-value=49 Score=35.53 Aligned_cols=26 Identities=35% Similarity=0.483 Sum_probs=20.8
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCE
Q 007976 12 QTLFASIDMGTSSFKLLIIRAYPNGKF 38 (582)
Q Consensus 12 ~~~~AvIDIGSNSiRL~I~e~~~~~~~ 38 (582)
++++..||+|+.|+|..+++.. +|++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~-~G~i 29 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAE-TGEL 29 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETT-TCCE
T ss_pred CcEEEEEEeccccEEEEEEECC-CCeE
Confidence 3578999999999999999742 5643
No 115
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=41.79 E-value=68 Score=31.97 Aligned_cols=59 Identities=10% Similarity=0.093 Sum_probs=42.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeee-eeeeeccCCCcCCCCCHHHHHHHHHHHHH
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLK-QPVILGRDLSSSCSISTQSQARSVESLLM 74 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k-~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~ 74 (582)
....+||||..|+-+.+++ ++.+....+.. -.|||-+..+.++..+++.++++.+.++.
T Consensus 131 ~~~lviDIGGGStEl~~~~---~~~~~~~~Sl~lG~vrl~e~f~~~~~~~~~~~~~~~~~i~~ 190 (315)
T 3mdq_A 131 HISLAMDIGGGSVEFIIGN---KNEILWKQSFEIGGQRLIDRFHVHDPMREDDRVMMHNYFDE 190 (315)
T ss_dssp CCEEEEEECSSCEEEEEEC---SSCEEEEEEESCCHHHHHHHSCCCSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCceEEEEEE---CCeEeeeEEEechhhHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 4578999999999999995 34443332322 23677777788888999888877666554
No 116
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=38.27 E-value=1.2e+02 Score=26.41 Aligned_cols=86 Identities=15% Similarity=0.243 Sum_probs=54.3
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEE
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVA 93 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vA 93 (582)
++-+||.|+-.|=+.|.+.. ...-.++..... . ... ..+....++++++++. ..+||
T Consensus 4 ~iLglD~G~kriGvAvsd~~-~~~A~pl~ti~~----~-~~~--------------~~~~~l~~li~e~~v~---~iVvG 60 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI-TGTARPLPAIKA----Q-DGT--------------PDWNIIERLLKEWQPD---EIIVG 60 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT-TTEEEEEEEEEE----E-TTE--------------ECHHHHHHHHHHHCCS---EEEEE
T ss_pred eEEEEEeCCCEEEEEEEcCC-CCEEeeEEEEEc----C-Ccc--------------hHHHHHHHHHHHcCCC---EEEEe
Confidence 47899999999988888642 222233432221 1 100 1245667778888884 46676
Q ss_pred -------ehhhhhcCChHHHHHHHHHHcCCcEEEeCh
Q 007976 94 -------TAAVRAAENKDEFVECVREKVGFEVDVLTG 123 (582)
Q Consensus 94 -------TsA~R~A~N~~~fl~~I~~~tG~~i~VIsg 123 (582)
|..- .|.-...|.++++.+++++|...+.
T Consensus 61 lP~~mdGt~~~-~~~~~~~f~~~L~~~~~lpV~~~DE 96 (138)
T 1nu0_A 61 LPLNMDGTEQP-LTARARKFANRIHGRFGVEVKLHDE 96 (138)
T ss_dssp EEECTTSCBCH-HHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred cccCCCcCcCH-HHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 3321 2334478999999999999988764
No 117
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=34.54 E-value=31 Score=35.02 Aligned_cols=130 Identities=23% Similarity=0.298 Sum_probs=56.4
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEe
Q 007976 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVAT 94 (582)
Q Consensus 15 ~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vAT 94 (582)
+-.+|||.=.++... .+++|.+ .+ ...+..|=++. +++-++|+.+.+. + +..-++=|
T Consensus 2 iiG~DIGGAn~K~a~--~~~~g~~-~~--~~~~~PlW~~~-----------~~L~~~l~~~~~~-----~--~~~avtMT 58 (334)
T 3cet_A 2 ILGIDIGGANTKITE--LHENGEF-KV--HHLYFPMWKNN-----------DKLAEVLKTYSND-----V--SHVALVTT 58 (334)
T ss_dssp EEEEEEC--CEEEEE--ECSTTCC-EE--EEC-------------------------------------C--CEEEEEEC
T ss_pred eeEEEecccceeeee--ecCCCce-EE--EEEecCCcCCc-----------hHHHHHHHHHHhh-----h--ccEEEEec
Confidence 457999988888755 4546654 22 22233333332 2222333333221 1 12334556
Q ss_pred hhhhhc-CCh----HHHHHHHHHHcCCcEEEeChH------HHHHHHHhhhhccCC---------CCCCceEEEEeCCCc
Q 007976 95 AAVRAA-ENK----DEFVECVREKVGFEVDVLTGE------QEAKFVYMGVLQFLP---------VFDRLVLSVDIGGGS 154 (582)
Q Consensus 95 sA~R~A-~N~----~~fl~~I~~~tG~~i~VIsge------EEA~l~~~gv~~~l~---------~~~~~~lviDIGGGS 154 (582)
.=+-++ .|+ ..+++.+++.++-+|.++.+. +++.=...-+..+-+ ...++++++||||=.
T Consensus 59 gELaD~f~~k~eGV~~I~~~v~~~~~~~v~i~~~dGG~l~~~~a~~~p~~~aaanw~ASa~~~A~~~~~~~llvDIGsTT 138 (334)
T 3cet_A 59 AELADSYETKKEGVDNILNAAESAFGSNISVFDSNGNFISLESAKTNNMKVSASNWCGTAKWVSKNIEENCILVDMGSTT 138 (334)
T ss_dssp CC------CTTHHHHHHHHHHHHHHTTCEEEECSSSCEEETTHHHHCGGGTBCCSSHHHHHHHHHHTCSSEEEEEECSSC
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHhcCCceEEEecCCCcccHHHHhhCHHHHHhcCHHHHHHHHHHhcCCCEEEEEcCcch
Confidence 555554 222 234455566666666444332 233211211111100 011358999999999
Q ss_pred eEEEEeeCCeEEE
Q 007976 155 TEFVIGKRGKVVF 167 (582)
Q Consensus 155 tEl~~~~~~~~~~ 167 (582)
|.|+.+.+|++..
T Consensus 139 TDIipi~~G~pl~ 151 (334)
T 3cet_A 139 TDIIPIVEGKVVA 151 (334)
T ss_dssp EEEEEEETTEECC
T ss_pred hhhhhhcCCeecc
Confidence 9999999998743
No 118
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=34.30 E-value=43 Score=32.74 Aligned_cols=30 Identities=10% Similarity=0.053 Sum_probs=27.0
Q ss_pred eEEEEeCCCceEEEEeeCCeEEEEEEEech
Q 007976 145 VLSVDIGGGSTEFVIGKRGKVVFCESVNLG 174 (582)
Q Consensus 145 ~lviDIGGGStEl~~~~~~~~~~~~SlplG 174 (582)
.|++|||+-++-+.+++++++...++++-.
T Consensus 4 lL~IDIGNT~iK~gl~d~~~l~~~~r~~T~ 33 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDGDEIKLRFRHTSK 33 (266)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEECS
T ss_pred EEEEEECCCeEEEEEEECCEEEEEEEecCC
Confidence 589999999999999999999988888744
No 119
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=33.45 E-value=29 Score=36.88 Aligned_cols=23 Identities=22% Similarity=0.303 Sum_probs=19.6
Q ss_pred CCceEEEEEecccceEEEEEEEe
Q 007976 11 PQTLFASIDMGTSSFKLLIIRAY 33 (582)
Q Consensus 11 ~~~~~AvIDIGSNSiRL~I~e~~ 33 (582)
+.+.+..||+|+.|+|..+++.+
T Consensus 2 ~~~~~lgiDiGtts~k~~l~d~~ 24 (489)
T 2uyt_A 2 TFRNCVAVDLGASSGRVMLARYE 24 (489)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEE
T ss_pred CcceEEEEEecCCCceEEEEEec
Confidence 44568899999999999999864
No 120
>2e5n_A RNA polymerase II elongation factor ELL2; ELL_N2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.37 E-value=67 Score=26.57 Aligned_cols=47 Identities=19% Similarity=0.248 Sum_probs=32.8
Q ss_pred CCcchHHHHHHHHHHhhccccc--CCCCchhhhHHHHHcCCCCCCCCHHHHh
Q 007976 394 FEDKDLEYLEAACLLHNIGHFT--SKKGYHKQSCHIIMNGDHLYGYSTDEIK 443 (582)
Q Consensus 394 ~~~~~~~LL~~Aa~LHdIG~~I--~~~~h~kHS~yiI~ns~~l~G~s~~E~~ 443 (582)
++++++..| -++|.+|+..= +...+-+..+|-=.+-+| +|||..|++
T Consensus 41 l~~~d~~~l--~~iL~eVa~~~~~~~~y~Lk~~~~~eVq~dW-p~Yte~erq 89 (100)
T 2e5n_A 41 VNQKDKNSL--GAILQQVANLNSKDLSYTLKDYVFKELQRDW-PGYSEIDRR 89 (100)
T ss_dssp CCHHHHHHH--HHHHHHHEEEETTTTEEEECSTHHHHSCTTC-TTCCTTHHH
T ss_pred CCHHHHHHH--HHHHHHHHhcCCcCCeeehhHHHHHHhccCC-CCCCHHHHH
Confidence 344554444 56999999983 234444555777778885 999999999
No 121
>1miw_A TRNA CCA-adding enzyme; tRNA nucleotidyltransferase, translation, transferase; HET: ATP; 3.00A {Geobacillus stearothermophilus} SCOP: a.173.1.1 d.218.1.4 PDB: 1miv_A* 1miy_A*
Probab=30.32 E-value=42 Score=34.91 Aligned_cols=43 Identities=9% Similarity=0.102 Sum_probs=31.7
Q ss_pred HHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhcC
Q 007976 400 EYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHRK 460 (582)
Q Consensus 400 ~LL~~Aa~LHdIG~~I~~~~h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhrk 460 (582)
.++.||++|||+|. +- +.-+... ++||.+++. .++.++++|..
T Consensus 248 ~~l~~aaLlhdigk--------~~-a~~~l~r---Lkls~~~~~------~v~~Lv~~~~~ 290 (404)
T 1miw_A 248 REERWALLCHALGV--------QE-SRPFLRA---WKLPNKVVD------EAGAILTALAD 290 (404)
T ss_dssp HHHHHHHHHHHHTC--------SC-HHHHHHH---TTCCHHHHH------HHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCH--------HH-HHHHHHH---cCCCHHHHH------HHHHHHHHHHh
Confidence 36889999999996 12 2233333 589999999 88888888765
No 122
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=29.64 E-value=61 Score=32.36 Aligned_cols=58 Identities=17% Similarity=0.135 Sum_probs=39.0
Q ss_pred CceEEEEEecccceEEEEEEEeCCCCEEEEEeeeee---eeeccCCCcCCCCCHHHHHHHHHHHHH
Q 007976 12 QTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQP---VILGRDLSSSCSISTQSQARSVESLLM 74 (582)
Q Consensus 12 ~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~---vrLg~g~~~~g~Ls~e~i~r~~~~L~~ 74 (582)
.....+||||..|+-+.+++ ++.+ ......+ |||-+..+.++..+++.++++.+.++.
T Consensus 137 ~~~~lvvDIGGGStEl~~~~---~~~~--~~~~Sl~~G~v~l~e~~~~~~~~~~~~~~~~~~~i~~ 197 (315)
T 1t6c_A 137 EGEVCVVDQGGGSTEYVFGK---GYKV--REVISLPIGIVNLTETFFKQDPPTEEEVKRFFEFLEK 197 (315)
T ss_dssp CSEEEEEEEETTEEEEEEEE---TTEE--EEEEEECCCHHHHHHHHCCSSSCCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEEe---CCce--eeEEEEeccHHHHHHHhccCCCCCHHHHHHHHHHHHH
Confidence 44589999999999999985 3433 3333322 456666666778888877766655544
No 123
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=29.12 E-value=1.2e+02 Score=31.93 Aligned_cols=71 Identities=15% Similarity=0.320 Sum_probs=37.7
Q ss_pred EEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCC--CH-HHHHHHHHHHHHHHHHHHHcCCCCccEEE
Q 007976 15 FASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSI--ST-QSQARSVESLLMFRDIIQSHNISRDHTRA 91 (582)
Q Consensus 15 ~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~L--s~-e~i~r~~~~L~~f~~~~~~~~v~~~~i~~ 91 (582)
+..||+|+.|+|..+++. +|. ++...+.+...- ....|.. ++ +-.+.+++++++.. ++.+. .+|.+
T Consensus 2 ~lgiDiGtt~~k~~l~d~--~g~--~l~~~~~~~~~~--~p~~g~~e~d~~~~~~~i~~~i~~~~---~~~~~--~~i~~ 70 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE--QGE--VVAAQTEKLTVS--RPHPLWSEQDPEQWWQATDRAMKALG---DQHSL--QDVKA 70 (484)
T ss_dssp EEEEEECSSEEEEEEECT--TSC--EEEEEEEECCCB--CSSTTCCEECHHHHHHHHHHHHHHHH---HHSCC--TTCCE
T ss_pred EEEEEecCcccEEEEECC--CCC--EEEEEEeccccc--cCCCCCEeECHHHHHHHHHHHHHHHH---HhCCc--cceEE
Confidence 568999999999999964 454 344444433221 1222322 23 33455555565543 33322 24555
Q ss_pred EEehh
Q 007976 92 VATAA 96 (582)
Q Consensus 92 vATsA 96 (582)
|+-++
T Consensus 71 Igis~ 75 (484)
T 2itm_A 71 LGIAG 75 (484)
T ss_dssp EEEEE
T ss_pred EEEcC
Confidence 65433
No 124
>1vfg_A A-adding enzyme, poly A polymerase; transferase, RNA, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: APC; 2.80A {Aquifex aeolicus} SCOP: a.173.1.1 d.218.1.4
Probab=28.79 E-value=52 Score=33.95 Aligned_cols=43 Identities=7% Similarity=-0.006 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhhcccccCCCCchhhhHHHHHcCCCCCCCCHHHHhhhhhHHHHHHHHHhhc
Q 007976 399 LEYLEAACLLHNIGHFTSKKGYHKQSCHIIMNGDHLYGYSTDEIKHLVCLQLIALLTRFHR 459 (582)
Q Consensus 399 ~~LL~~Aa~LHdIG~~I~~~~h~kHS~yiI~ns~~l~G~s~~E~~~~~~~~~iA~iaryhr 459 (582)
..+|.+||+|||+|. +-.. -+... ++||.+++. .+..++++|.
T Consensus 256 ~~~l~laaLlhdi~~--------~~a~-~~~~r---L~ls~~~~~------~v~~Lv~~h~ 298 (390)
T 1vfg_A 256 YGWLYLLILISNLDY--------ERGK-HFLEE---MSAPSWVRE------TYKFMKFKLG 298 (390)
T ss_dssp HHHHHHHHHHCSCCS--------STTH-HHHHH---TTCCHHHHH------HHHHHHHHHH
T ss_pred hHHHHHHHHHccCCH--------HHHH-HHHHH---cCCCHHHHH------HHHHHHHHHH
Confidence 358999999999995 1122 22222 489999999 7888887763
No 125
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=28.52 E-value=54 Score=35.20 Aligned_cols=57 Identities=18% Similarity=0.116 Sum_probs=38.3
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeee-eeeeeccCCCcCCCCCHHHHHHHHHHHH
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLK-QPVILGRDLSSSCSISTQSQARSVESLL 73 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k-~~vrLg~g~~~~g~Ls~e~i~r~~~~L~ 73 (582)
...+||||..|+-+.+++ ++.+....+.. -.|||-+..+.++.++++.++++.+.++
T Consensus 138 ~~lviDIGGGStEl~~~~---~~~~~~~~Sl~lG~vrlte~f~~~~~~~~~~~~~~~~~i~ 195 (513)
T 1u6z_A 138 RKLVIDIGGGSTELVIGE---NFEPILVESRRMGCVSFAQLYFPGGVINKENFQRARMAAA 195 (513)
T ss_dssp CEEEEEECSSCEEEEEEE---TTEEEEEEEESCCHHHHHHHHSGGGBCCHHHHHHHHHHHH
T ss_pred CEEEEEECCCcEEEEEEe---CCeeeEEEEEeccHHHHHHHHcccCCCCHHHHHHHHHHHH
Confidence 478999999999999984 34332222221 1246666667778889988888755444
No 126
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=28.47 E-value=17 Score=37.71 Aligned_cols=108 Identities=11% Similarity=0.103 Sum_probs=41.4
Q ss_pred EEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEeh
Q 007976 16 ASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATA 95 (582)
Q Consensus 16 AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vATs 95 (582)
..+|+|+.++-+.-. ....+.....+.+|.|... +..+.++.+| . ++.+|...
T Consensus 9 ~~~~~~~~~~~~~~m-------m~~~f~~p~~i~~G~g~l~-----------------~l~~~l~~~g-~--r~liVtd~ 61 (387)
T 3uhj_A 9 SGVDLGTENLYFQSM-------MARAFGGPNKYIQRAGEID-----------------KLAAYLAPLG-K--RALVLIDR 61 (387)
T ss_dssp ----------------------CEEEEECCSEEEECTTTTT-----------------TTHHHHGGGC-S--EEEEEECT
T ss_pred cccccCccceehhhh-------hhhHhcCCCeEEEcCCHHH-----------------HHHHHHHHcC-C--EEEEEECc
Confidence 468999887654433 1112233345567877432 2223445566 3 67778777
Q ss_pred hhhhcCChHHHHHHHHHHcCCcE--EEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCce
Q 007976 96 AVRAAENKDEFVECVREKVGFEV--DVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGST 155 (582)
Q Consensus 96 A~R~A~N~~~fl~~I~~~tG~~i--~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGSt 155 (582)
.+.+. -.+.+.+.+++ |+++ ..+.|+.--.-.-.++...... +.-+||=|||||+
T Consensus 62 ~~~~~-~~~~v~~~L~~--g~~~~~~~~~~~p~~~~v~~~~~~~~~~--~~d~IIavGGGs~ 118 (387)
T 3uhj_A 62 VLFDA-LSERIGKSCGD--SLDIRFERFGGECCTSEIERVRKVAIEH--GSDILVGVGGGKT 118 (387)
T ss_dssp TTHHH-HHHHC--------CCEEEEEECCSSCSHHHHHHHHHHHHHH--TCSEEEEESSHHH
T ss_pred hHHHH-HHHHHHHHHHc--CCCeEEEEcCCCCCHHHHHHHHHHHhhc--CCCEEEEeCCcHH
Confidence 77654 23334444433 7775 2334332111111121111111 1138999999996
No 127
>1zkl_A HCP1, TM22, high-affinity CAMP-specific 3',5'-cyclic phosphodiesterase 7A; PDE, hydrolase; HET: IBM; 1.67A {Homo sapiens} PDB: 3g3n_A*
Probab=28.37 E-value=48 Score=33.86 Aligned_cols=42 Identities=21% Similarity=0.188 Sum_probs=27.4
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhccc
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~ 413 (582)
.||..|...+-.+. ... ++.. .+++-+..-|-+||+.||+|.
T Consensus 86 ~HA~dV~q~~~~ll---~~~-~l~~-------~l~~le~~alliAAl~HDv~H 127 (353)
T 1zkl_A 86 VHAADVTQAMHCYL---KEP-KLAN-------SVTPWDILLSLIAAATHDLDH 127 (353)
T ss_dssp HHHHHHHHHHHHHH---TSH-HHHT-------TCCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHH---hhh-HHhh-------hCCHHHHHHHHHHHHHhccCC
Confidence 58877776654442 211 1111 356777788999999999995
No 128
>2paq_A 5'-deoxynucleotidase YFBR; HD domain phosphoh structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; 2.10A {Escherichia coli} SCOP: a.211.1.1 PDB: 2par_A* 2pau_A*
Probab=27.93 E-value=60 Score=30.25 Aligned_cols=46 Identities=11% Similarity=0.114 Sum_probs=29.5
Q ss_pred hhHHHHHHHHHHHHHHHH-hcccccchhhhhhccCCcchHHHHHHHHHHhhcccccCCCC
Q 007976 361 KAGAQCASIAKDIFEGLR-KCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGHFTSKKG 419 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~-~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~~I~~~~ 419 (582)
+|+-+|+.+|..|=. +. +.++- +-+......+|+|||+|-.+-.+-
T Consensus 34 eHS~~VA~lA~~la~-~~~~~~~~------------~vD~~~~~~~aLlHDi~E~~~GDi 80 (201)
T 2paq_A 34 EHSLQVAMVAHALAA-IKNRKFGG------------NVNAERIALLAMYHDASEVLTGDL 80 (201)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHSCC------------CCCHHHHHHHHHHTTTTHHHHCCC
T ss_pred HHHHHHHHHHHHHHh-hhHHhcCc------------ccCHHHHHHHHHhcccccccCCCC
Confidence 688888888886421 11 22210 112356778899999999887664
No 129
>2doa_A RNA polymerase II elongation factor ELL; C19ORF17, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.81
Probab=27.66 E-value=36 Score=28.43 Aligned_cols=47 Identities=17% Similarity=0.227 Sum_probs=32.8
Q ss_pred CCcchHHHHHHHHHHhhcccc--cCCCCchhhhHHHHHcCCCCCCCCHHHHh
Q 007976 394 FEDKDLEYLEAACLLHNIGHF--TSKKGYHKQSCHIIMNGDHLYGYSTDEIK 443 (582)
Q Consensus 394 ~~~~~~~LL~~Aa~LHdIG~~--I~~~~h~kHS~yiI~ns~~l~G~s~~E~~ 443 (582)
+++.++..| -++|.+|+.. =+...+-+..+|-=.+-+| +|||..|+.
T Consensus 40 l~~~d~~~l--~~iL~eVA~~~~~~~~y~Lk~~~y~eVq~dW-p~Yte~erq 88 (104)
T 2doa_A 40 LTQADKDAL--DGLLQQVANMSAKDGTCTLQDCMYKDVQKDW-PGYSEGDQQ 88 (104)
T ss_dssp CCHHHHHHH--HHHHHHSSEECSSSCEEECCSSGGGGCCSCC-TTCCSHHHH
T ss_pred CCHHHHHHH--HHHHHHHHhcCCcCCeeeehHHHHHHhcCCC-CCCCHHHHH
Confidence 344454444 5699999988 3444445555676678885 999999999
No 130
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=25.96 E-value=79 Score=34.40 Aligned_cols=57 Identities=16% Similarity=0.219 Sum_probs=39.0
Q ss_pred ceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHH
Q 007976 13 TLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRD 77 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~ 77 (582)
++++.||||+.++...++++++ |.++++-.-..++ .|+ +| +.+.+..+.++|++-.+
T Consensus 2 ~~i~GiDIGnsttev~l~~~~~-g~i~~l~~g~~~t---tGi--KG--t~~Ni~g~~~si~~a~~ 58 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDYP-QARAFVASGIVAT---TGM--KG--TRDNIAGTLAALEQALA 58 (607)
T ss_dssp CEEEEEEECSSEEEEEEEECBT-TBCCCCEEEEEEC---CSS--TT--SGGGHHHHHHHHHHHHT
T ss_pred cEEEEEEecCceEEEEEEEEcC-CeEEEEEeecccC---Ccc--ce--eeeCHHHHHHHHHHHHH
Confidence 5799999999999999999874 7777765544432 122 22 34557777777766543
No 131
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=25.29 E-value=2.6e+02 Score=27.46 Aligned_cols=120 Identities=11% Similarity=0.147 Sum_probs=0.0
Q ss_pred CCceEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCCccEE
Q 007976 11 PQTLFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDIIQSHNISRDHTR 90 (582)
Q Consensus 11 ~~~~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~ 90 (582)
+..++..||||...+|+.+++.. +|.+....+... ...+...+.+++|.+... ..+ .-.
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~dl~-~g~i~~~~~~~~----------------~~~~~~~~~i~~~~~~~~-~~i---~gi 70 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCDIA-SGEISQAKTYSG----------------LDYPSLEAVIRVYLEEHK-VEV---KDG 70 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEETT-TCCEEEEEEEEG----------------GGCSCHHHHHHHHHHHSC-CCC---CEE
T ss_pred CCCEEEEEEechhheEEEEEECC-CCcEEEEEEecC----------------CCcCCHHHHHHHHHHhcC-CCc---cEE
Q ss_pred EEEehhhhhcC---------ChHHHHHHHHHHcCCc-EEEeChHHHHHHHHhhh--------hccCCCCCCceEEEEeCC
Q 007976 91 AVATAAVRAAE---------NKDEFVECVREKVGFE-VDVLTGEQEAKFVYMGV--------LQFLPVFDRLVLSVDIGG 152 (582)
Q Consensus 91 ~vATsA~R~A~---------N~~~fl~~I~~~tG~~-i~VIsgeEEA~l~~~gv--------~~~l~~~~~~~lviDIGG 152 (582)
+||....=+.. + -. .+.+++++|++ |.|.+.-.=+-|.-.-. -..-....++.+++-+|.
T Consensus 71 gi~~pG~vd~~~~~~~nl~w~-~~-~~~l~~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GT 148 (332)
T 1sz2_A 71 CIAIACPITGDWVAMTNHTWA-FS-IAEMKKNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGT 148 (332)
T ss_dssp EEEESSCCCSSEECCSSSCCC-EE-HHHHHHHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESS
T ss_pred EEEEeCceeCCEEeeeCCCCc-CC-HHHHHHHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCc
Q ss_pred C
Q 007976 153 G 153 (582)
Q Consensus 153 G 153 (582)
|
T Consensus 149 G 149 (332)
T 1sz2_A 149 G 149 (332)
T ss_dssp S
T ss_pred c
No 132
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=24.26 E-value=1.4e+02 Score=31.40 Aligned_cols=60 Identities=15% Similarity=0.147 Sum_probs=38.4
Q ss_pred ceEEEEEecccceEEEEEEEeC-CCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHH
Q 007976 13 TLFASIDMGTSSFKLLIIRAYP-NGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRD 77 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~~~-~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~ 77 (582)
-.|-+||+|..++|..+++... ++.+.+.. .+ .++-..+.. + =.++-.+...++++.|..
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~G~~~~~~i~~-~~--~~ip~~~~~-~-~~~~lfd~Ia~~i~~~l~ 128 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLEGKGKSPRIQE-RT--YCIPAEKMS-G-SGTELFKYIAETLADFLE 128 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEECC-CCCCEEEE-EE--ECCCTTTTT-S-BHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEeCCCeEEEEEEecCCCCcceEEEE-EE--EecCCcccC-C-CHHHHHHHHHHHHHHHHH
Confidence 4688999999999999999864 34344421 12 223222111 1 125667888888988865
No 133
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=23.55 E-value=53 Score=34.28 Aligned_cols=31 Identities=26% Similarity=0.353 Sum_probs=20.1
Q ss_pred cccccccCCCceEEEEEecccceEEEEEEEe
Q 007976 3 TNTSYMQIPQTLFASIDMGTSSFKLLIIRAY 33 (582)
Q Consensus 3 ~~~~~~~~~~~~~AvIDIGSNSiRL~I~e~~ 33 (582)
+|-|-+.|+++++=||.-||.|+++.+++..
T Consensus 9 ~~gm~~~Ms~klILviN~GSSS~K~~lf~~~ 39 (415)
T 3sk3_A 9 HHGMASHMSSKLVLVLNCGSSSLKFAIIDAV 39 (415)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEETT
T ss_pred cccccccCCCCeEEEEeCchHhhhheeEECC
Confidence 4556677888889999999999999999853
No 134
>1taz_A Calcium/calmodulin-dependent 3',5'-cyclic nucleot phosphodiesterase 1B; PDE1B, hydrolase; HET: CME; 1.77A {Homo sapiens} SCOP: a.211.1.2
Probab=23.20 E-value=76 Score=32.52 Aligned_cols=42 Identities=12% Similarity=0.144 Sum_probs=28.2
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhccc
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~ 413 (582)
.||..|...+-.+.... ++.. .+++-+..-|-+||+.||+|.
T Consensus 85 ~HA~dV~q~~~~ll~~~----~l~~-------~l~~le~~alliAAl~HDv~H 126 (365)
T 1taz_A 85 IHAADVTQTVHCFLLRT----GMVH-------CLSEIELLAIIFAAAIHDYEH 126 (365)
T ss_dssp HHHHHHHHHHHHHHHHH----SGGG-------GSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHhh----hHHh-------hCCHHHHHHHHHHHHHhcCCC
Confidence 67877777665543222 1111 356777888999999999994
No 135
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=22.86 E-value=1.4e+02 Score=26.28 Aligned_cols=59 Identities=12% Similarity=0.032 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHH
Q 007976 60 ISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEA 127 (582)
Q Consensus 60 Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA 127 (582)
.+.+.|..++ .+.++++|++...|.++||-.+.. .+.-+-++-++.|++++..+.+|=+
T Consensus 22 ~~~~~i~~ai------~~aL~~~~l~~~~v~~latid~K~---dE~gL~~~A~~lg~pl~~~~~eeL~ 80 (145)
T 2w6k_A 22 CSAEHLRALL------ERTLGEHGRSLAELDALASIDGKR---DEPGLRQLATLLERPVHFLAPAVLH 80 (145)
T ss_dssp CCHHHHHHHH------HHHHHHTTCCGGGCCEEEEECSSS---CCHHHHHHHHHHTSCEEEECHHHHH
T ss_pred CCHHHHHHHH------HHHHHHcCCCHHHcceEechHHhC---CCHHHHHHHHHhCCCcEEeCHHHHh
Confidence 3566655443 455667888888899999987654 2344555667889999999877744
No 136
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=22.81 E-value=3e+02 Score=29.18 Aligned_cols=60 Identities=23% Similarity=0.262 Sum_probs=41.3
Q ss_pred eEEEEEecccceEEEEEEEeCCCCEEEEEeeeeeeeeccCCCcCCCCCHHHHHHHHHHHHHHHHH
Q 007976 14 LFASIDMGTSSFKLLIIRAYPNGKFLTIDTLKQPVILGRDLSSSCSISTQSQARSVESLLMFRDI 78 (582)
Q Consensus 14 ~~AvIDIGSNSiRL~I~e~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~f~~~ 78 (582)
.|-+||+|-.++|..+++...++.+.++ ..+. ++-+.+.. |. .++-.+-..+++..|.+.
T Consensus 81 ~~LalDlGGTn~Rv~~V~l~g~~~~~~~-~~~~--~Ip~~~~~-~~-~~~lfd~Ia~~i~~fl~~ 140 (485)
T 3o8m_A 81 DFLALDLGGTNLRVVLVKLGGNHDFDTT-QNKY--RLPDHLRT-GT-SEQLWSFIAKCLKEFVDE 140 (485)
T ss_dssp EEEEEEESSSEEEEEEEEEESSSCEEEE-EEEE--ECCTTGGG-SB-HHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCeEEEEEEEECCCCceEEE-EEEE--ecCchhcc-CC-HHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999866566654 2222 33333221 11 367788888888888764
No 137
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=22.53 E-value=1.1e+02 Score=30.85 Aligned_cols=62 Identities=11% Similarity=0.077 Sum_probs=40.5
Q ss_pred ceEEEEEecccceEEEEEEE--eCC-CCEEEEEeee-eeeeeccCCCcCCCCCHHHHHHHHHHHHH
Q 007976 13 TLFASIDMGTSSFKLLIIRA--YPN-GKFLTIDTLK-QPVILGRDLSSSCSISTQSQARSVESLLM 74 (582)
Q Consensus 13 ~~~AvIDIGSNSiRL~I~e~--~~~-~~~~~l~~~k-~~vrLg~g~~~~g~Ls~e~i~r~~~~L~~ 74 (582)
....+||||..|+-+.+++- ... +.+....+.. -.++|-+..+.++..+++.++++.+.++.
T Consensus 146 ~~~lviDIGGGStel~~~~~~~~~~~~~~~~~~SlplG~v~lt~~~~~~~~~~~~~~~~~~~~i~~ 211 (343)
T 3cer_A 146 APYLVVDLGGGSTELVIGGDGVSAPTTQVQGAFSMNIGSVRMTERHLTNDPPTQTQIDEAVADVDE 211 (343)
T ss_dssp SSEEEEEECSSCEEEEECCCSSSSCTTSCSEEEEESCCHHHHHHHTCCSSSCCHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCceEEEEeecCccCcccccceeEEEehhHHHHHHHhcccCCCCHHHHHHHHHHHHH
Confidence 45789999999999999853 110 2211111111 12466677777788999988887777665
No 138
>2our_A CAMP and CAMP-inhibited CGMP 3',5'-cyclic phosphodiesterase 10A; PDE10, substrate specificity, hydrolase; HET: CMP; 1.45A {Homo sapiens} PDB: 2ous_A 2ouu_A* 3sn7_A* 3sni_A* 3snl_A* 4dff_A* 2wey_A* 2oun_A* 2oup_A 2ouq_A* 2ouv_A 2ouy_A* 4ael_A* 2y0j_A* 4ddl_A* 3uuo_A* 3ui7_A* 2o8h_A* 2ovv_A* 2ovy_A* ...
Probab=22.47 E-value=66 Score=32.50 Aligned_cols=40 Identities=28% Similarity=0.393 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhccc
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~ 413 (582)
.||..|...+-.+. ..... .+++-+..-|-+||+.||+|.
T Consensus 83 ~HA~dV~q~~~~ll---~~~~~----------~l~~le~~alliAAl~HDv~H 122 (331)
T 2our_A 83 KHAVTVAHCMYAIL---QNNHT----------LFTDLERKGLLIACLCHDLDH 122 (331)
T ss_dssp HHHHHHHHHHHHHH---HTTGG----------GSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHH---Hhccc----------cCCHHHHHHHHHHHHHccCCC
Confidence 67777776655543 32211 256677788999999999995
No 139
>1f0j_A PDE4B, phosphodiesterase 4B; PDE phosphodiesterase, hydrolase; 1.77A {Homo sapiens} SCOP: a.211.1.2 PDB: 1ro6_A* 1ro9_A* 1ror_A* 3hmv_A* 1tb5_A* 1xm6_A* 1xlx_A* 1xm4_A* 1xlz_A* 1xmu_A* 1xmy_A* 1xn0_A* 1xos_A* 1xot_B* 1y2h_A* 1y2j_A* 3kkt_A* 3g4i_A* 3g4k_A* 3g4l_A* ...
Probab=21.86 E-value=1.8e+02 Score=29.79 Aligned_cols=42 Identities=21% Similarity=0.230 Sum_probs=27.8
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhhhhccCCcchHHHHHHHHHHhhccc
Q 007976 361 KAGAQCASIAKDIFEGLRKCDKLYNNQVKLIASFEDKDLEYLEAACLLHNIGH 413 (582)
Q Consensus 361 ~ha~~V~~~a~~LFd~L~~~~~l~~~~~~~~~~~~~~~~~LL~~Aa~LHdIG~ 413 (582)
.||..|...+-.| |... ++.. .+++-+..-|-+||+.||+|.
T Consensus 86 ~HA~dV~q~~~~l---l~~~-~l~~-------~l~~le~~alliAAl~HDvdH 127 (377)
T 1f0j_A 86 LHAADVAQSTHVL---LSTP-ALDA-------VFTDLEILAAIFAAAIHDVDH 127 (377)
T ss_dssp HHHHHHHHHHHHH---HTCG-GGTT-------TSCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHH---Hhcc-hhhh-------hCCHHHHHHHHHHHHHcCCCC
Confidence 6887777765443 3211 1111 356777788999999999995
No 140
>4dzo_A Mitotic spindle assembly checkpoint protein MAD1; homodimer, kinetochore, mitosis, spindle checkpoint protein, nucleus, cell cycle; HET: MSE; 1.76A {Homo sapiens}
Probab=21.78 E-value=71 Score=27.42 Aligned_cols=44 Identities=14% Similarity=0.255 Sum_probs=29.7
Q ss_pred HHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCC
Q 007976 104 DEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGG 153 (582)
Q Consensus 104 ~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGG 153 (582)
.+|.+.+..-+|++|+.++.. ++ =+.+.+...+++.+++|..|+
T Consensus 32 ~eFReav~~LlGykId~~~~~---~~---rl~S~Ya~~~~d~L~F~~~~~ 75 (123)
T 4dzo_A 32 QEFRKACYTLTGYQIDITTEN---QY---RLTSLYAEHPGDCLIFKATSP 75 (123)
T ss_dssp HHHHHHHHHHHSEEEEEETTT---EE---EEEETTCSSTTCCEEEEECC-
T ss_pred HHHHHHHHHHhCeEEEEccCC---eE---EEEEeecCCCCCeEEEEecCC
Confidence 689999999999999999642 22 222223333356899998653
No 141
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=20.82 E-value=21 Score=36.33 Aligned_cols=74 Identities=15% Similarity=0.237 Sum_probs=38.0
Q ss_pred HHHHHcCCCCccEEEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHHHHhhhhccCCCCCCceEEEEeCCCce
Q 007976 77 DIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKFVYMGVLQFLPVFDRLVLSVDIGGGST 155 (582)
Q Consensus 77 ~~~~~~~v~~~~i~~vATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l~~~gv~~~l~~~~~~~lviDIGGGSt 155 (582)
+.++.+|.+ ++.+|....+.+ ...+.+.+.++ +.|+++.+.++..+..+...--...+. ..+.-+|+=+||||+
T Consensus 27 ~~l~~~g~~--~~livtd~~~~~-~~~~~v~~~L~-~~g~~~~~~~~~~~~~~~~v~~~~~~~-~~~~d~IIavGGGsv 100 (354)
T 3ce9_A 27 QIIKKGNFK--RVSLYFGEGIYE-LFGETIEKSIK-SSNIEIEAVETVKNIDFDEIGTNAFKI-PAEVDALIGIGGGKA 100 (354)
T ss_dssp HHHGGGTCS--EEEEEEETTHHH-HHHHHHHHHHH-TTTCEEEEEEEECCCBHHHHHHHHTTS-CTTCCEEEEEESHHH
T ss_pred HHHHhcCCC--eEEEEECccHHH-HHHHHHHHHHH-HcCCeEEEEecCCCCCHHHHHHHHHhh-hcCCCEEEEECChHH
Confidence 334455653 677777666655 23444444443 458888777631222111111111121 123348999999986
No 142
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=20.49 E-value=1.1e+02 Score=29.82 Aligned_cols=28 Identities=11% Similarity=0.229 Sum_probs=24.9
Q ss_pred eEEEEeCCCceEEEEeeCCeEEEEEEEe
Q 007976 145 VLSVDIGGGSTEFVIGKRGKVVFCESVN 172 (582)
Q Consensus 145 ~lviDIGGGStEl~~~~~~~~~~~~Slp 172 (582)
.|++|||.-++-+.+++++++...+.++
T Consensus 2 lL~IDIGNT~ik~gl~~~~~l~~~~r~~ 29 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGELRQHWRME 29 (268)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEECcCcEEEEEEECCEEEEEEEec
Confidence 4789999999999999999988877766
No 143
>3eeq_A Putative cobalamin biosynthesis protein G homolog; structural genomics, unknown function, PSI-2, protein structure initiative; 2.30A {Sulfolobus solfataricus} SCOP: c.151.1.1 c.152.1.1
Probab=20.01 E-value=1.4e+02 Score=30.07 Aligned_cols=56 Identities=11% Similarity=0.283 Sum_probs=41.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCCCccEEEEEehhhhhcCChHHHHHHHHHHcCCcEEEeChHHHHHH
Q 007976 60 ISTQSQARSVESLLMFRDIIQSHNISRDHTRAVATAAVRAAENKDEFVECVREKVGFEVDVLTGEQEAKF 129 (582)
Q Consensus 60 Ls~e~i~r~~~~L~~f~~~~~~~~v~~~~i~~vATsA~R~A~N~~~fl~~I~~~tG~~i~VIsgeEEA~l 129 (582)
.+.+.+..+++ +.+++++++...|.++||-.+. +.++-++.|++++..|.+|=+..
T Consensus 220 ~~~~~i~~ai~------~aL~~~~l~~~~v~~iasid~K--------L~~~A~~l~~pl~~~~~eeL~~v 275 (336)
T 3eeq_A 220 VKMEEIRDGIY------KVLERLNLKRERIGIIASIREE--------VKKIADEFNVRFRLVNEEEINNF 275 (336)
T ss_dssp CCHHHHHHHHH------HHHHHHTCCGGGEEEEEESCTT--------HHHHHHHHTCEEEECCHHHHHTC
T ss_pred CCHHHHHHHHH------HHHHHcCCCHHHhhEEEcHHHH--------HHHHHHHhCCCEEEeCHHHHhhc
Confidence 46666655443 4455678888889999998775 66667788999999999886653
Done!