Query 007977
Match_columns 582
No_of_seqs 483 out of 2749
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 15:08:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007977.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007977hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3n_A Kelch-like protein 11; 100.0 2.3E-44 7.7E-49 367.9 13.1 248 117-408 11-269 (279)
2 3hve_A Gigaxonin; ubiquitin, c 100.0 3.9E-43 1.3E-47 354.2 5.3 238 118-401 11-255 (256)
3 3hqi_A Speckle-type POZ protei 100.0 5.7E-30 1.9E-34 265.0 8.7 205 64-315 105-311 (312)
4 3htm_A Speckle-type POZ protei 99.9 3.8E-26 1.3E-30 215.6 8.8 157 114-315 13-171 (172)
5 4eoz_A Speckle-type POZ protei 99.9 1.3E-23 4.3E-28 192.8 5.0 139 114-296 4-144 (145)
6 2if5_A Zinc finger and BTB dom 99.8 8.5E-22 2.9E-26 175.7 6.9 114 118-267 5-120 (120)
7 2z8h_A Transcription regulator 99.8 1.9E-21 6.6E-26 178.1 8.0 123 116-276 14-138 (138)
8 1r29_A B-cell lymphoma 6 prote 99.8 3.3E-21 1.1E-25 173.7 7.1 115 117-268 8-125 (127)
9 3ohu_A Transcription regulator 99.8 3.8E-21 1.3E-25 172.8 6.2 115 114-266 8-125 (125)
10 2ppi_A Gigaxonin; BTB domain, 99.8 5.4E-21 1.9E-25 176.7 7.4 117 115-267 24-144 (144)
11 3b84_A Zinc finger and BTB dom 99.8 3.6E-21 1.2E-25 171.8 5.5 110 119-268 5-116 (119)
12 2yy9_A Zinc finger and BTB dom 99.8 4E-21 1.4E-25 175.5 5.9 116 118-274 5-122 (135)
13 2vpk_A Myoneurin; transcriptio 99.8 8.5E-21 2.9E-25 168.3 5.7 112 119-268 3-116 (116)
14 2ihc_A Transcription regulator 99.8 9.8E-21 3.4E-25 170.2 5.1 114 117-267 8-123 (124)
15 1buo_A POZ domain, protein (pr 99.8 2.3E-20 7.9E-25 167.0 6.0 110 118-268 8-119 (121)
16 2vkp_A BTB/POZ domain-containi 99.8 2.9E-20 9.8E-25 162.7 4.8 97 140-268 5-107 (109)
17 3ga1_A Nucleus accumbens-assoc 99.8 5.5E-20 1.9E-24 166.3 4.9 113 117-268 12-126 (129)
18 2q81_A MIZ-1 protein; BTB/POZ 99.8 2.3E-20 7.8E-25 166.6 1.6 109 118-267 7-117 (119)
19 3m5b_A Zinc finger and BTB dom 99.8 3.2E-19 1.1E-23 159.8 7.8 107 115-268 9-117 (119)
20 3fkc_A Transcriptional regulat 99.7 4.9E-18 1.7E-22 151.1 6.8 102 118-260 11-115 (116)
21 2eqx_A Kelch repeat and BTB do 99.7 6.1E-18 2.1E-22 148.2 5.5 96 266-374 4-99 (105)
22 2xn4_A Kelch-like protein 2; s 99.2 3.1E-11 1.1E-15 122.0 11.6 116 431-571 16-164 (302)
23 3ii7_A Kelch-like protein 7; p 99.2 5E-11 1.7E-15 120.7 12.2 121 427-572 7-159 (306)
24 2ast_A S-phase kinase-associat 99.2 5.2E-12 1.8E-16 118.5 2.7 107 146-284 3-142 (159)
25 4asc_A Kelch repeat and BTB do 99.2 6.8E-11 2.3E-15 120.5 10.8 118 431-573 99-254 (315)
26 3ii7_A Kelch-like protein 7; p 99.1 1.9E-10 6.6E-15 116.3 12.3 117 431-572 56-210 (306)
27 2vpj_A Kelch-like protein 12; 99.1 1.8E-10 6.1E-15 116.2 12.0 121 426-571 9-168 (301)
28 1zgk_A Kelch-like ECH-associat 99.1 1.9E-10 6.4E-15 117.0 11.5 116 431-571 71-224 (308)
29 2woz_A Kelch repeat and BTB do 99.1 1.2E-10 4E-15 118.9 10.0 118 431-573 110-264 (318)
30 1zgk_A Kelch-like ECH-associat 99.1 2.4E-10 8.2E-15 116.2 12.0 117 431-572 122-272 (308)
31 2xn4_A Kelch-like protein 2; s 99.1 2.6E-10 8.9E-15 115.2 11.7 116 431-571 62-213 (302)
32 4asc_A Kelch repeat and BTB do 99.1 1.9E-10 6.4E-15 117.2 10.6 106 441-571 68-205 (315)
33 2vpj_A Kelch-like protein 12; 99.1 3.8E-10 1.3E-14 113.7 12.3 116 431-571 113-262 (301)
34 2zwa_A Leucine carboxyl methyl 99.1 4.2E-11 1.4E-15 136.7 5.6 185 349-571 315-559 (695)
35 2woz_A Kelch repeat and BTB do 99.1 5E-10 1.7E-14 114.2 11.7 115 431-571 16-167 (318)
36 4ajy_C Transcription elongatio 98.9 1E-09 3.6E-14 94.4 4.1 73 151-255 12-97 (97)
37 2uvk_A YJHT; unknown function, 98.8 1.4E-08 4.9E-13 104.8 11.5 116 431-571 20-209 (357)
38 2uvk_A YJHT; unknown function, 98.8 1.9E-08 6.6E-13 103.8 11.9 109 440-573 168-327 (357)
39 2zwa_A Leucine carboxyl methyl 98.6 6E-08 2E-12 110.7 9.8 116 432-571 453-616 (695)
40 2p1m_A SKP1-like protein 1A; F 98.6 4.6E-09 1.6E-13 98.5 0.4 100 151-286 14-143 (160)
41 1fs1_B SKP1, cyclin A/CDK2-ass 98.6 1E-08 3.5E-13 94.2 2.3 97 146-279 4-129 (141)
42 1k3i_A Galactose oxidase precu 98.3 5E-07 1.7E-11 101.8 5.8 89 440-538 219-341 (656)
43 1k3i_A Galactose oxidase precu 98.2 1.7E-06 5.9E-11 97.4 6.7 107 441-571 167-306 (656)
44 1hv2_A Elongin C, ELC1; protei 97.7 1.5E-05 5.3E-10 68.5 3.8 77 146-255 6-99 (99)
45 2fnj_C Transcription elongatio 97.6 1.8E-05 6.2E-10 67.7 2.5 73 151-255 11-96 (96)
46 3v7d_A Suppressor of kinetocho 97.5 3.8E-05 1.3E-09 72.4 2.4 92 145-268 8-131 (169)
47 3drz_A BTB/POZ domain-containi 97.4 0.00016 5.4E-09 63.0 5.9 92 145-267 7-105 (107)
48 1by2_A MAC-2 binding protein; 97.2 2.2E-05 7.6E-10 69.9 -2.1 58 24-95 34-91 (119)
49 2oya_A Macrophage receptor mar 96.6 8.8E-05 3E-09 64.2 -3.3 56 24-96 29-84 (102)
50 1vcb_B Protein (elongin C); tu 96.6 0.00063 2.1E-08 59.8 2.1 78 146-255 19-112 (112)
51 3drx_A BTB/POZ domain-containi 95.8 0.0087 3E-07 57.7 5.2 94 144-268 12-112 (202)
52 3kvt_A Potassium channel prote 95.0 0.027 9.3E-07 49.5 5.2 94 144-268 5-104 (115)
53 2jop_A T-cell surface glycopro 94.8 0.0035 1.2E-07 56.5 -1.0 56 23-97 55-118 (131)
54 1s1g_A Potassium voltage-gated 92.8 0.18 6.3E-06 44.7 6.3 56 208-266 52-109 (124)
55 2xrc_A Human complement factor 91.8 0.024 8.1E-07 63.0 -1.0 56 24-93 122-178 (565)
56 1nn7_A Potassium channel KV4.2 91.4 0.14 4.9E-06 44.0 3.8 55 208-265 39-95 (105)
57 2nz0_B Potassium voltage-gated 89.7 0.27 9.4E-06 44.6 4.3 57 207-266 73-131 (140)
58 1lb6_A TNF receptor-associated 85.6 0.26 8.8E-06 45.1 1.4 35 64-100 124-158 (160)
59 1t1d_A Protein (potassium chan 85.4 0.62 2.1E-05 39.7 3.6 54 207-263 40-95 (100)
60 3ivv_A Speckle-type POZ protei 83.4 0.3 1E-05 43.8 0.9 37 63-99 108-144 (145)
61 2ja4_A T-cell surface glycopro 81.3 0.12 4.1E-06 44.2 -2.5 35 24-58 32-68 (101)
62 4ghu_A TNF receptor-associated 81.0 0.5 1.7E-05 45.1 1.4 35 64-100 155-189 (198)
63 1d00_A Tumor necrosis factor r 75.9 0.88 3E-05 41.7 1.4 34 64-98 133-166 (168)
64 2gkw_A TNF receptor-associated 75.7 0.79 2.7E-05 43.3 1.1 33 64-98 155-187 (192)
65 1ca9_A TRAF2, protein (TNF rec 73.0 1.1 3.7E-05 42.2 1.3 33 64-98 157-190 (192)
66 4gjh_A TNF receptor-associated 73.0 1.2 4E-05 41.5 1.5 34 64-97 139-172 (178)
67 1flk_A TNF receptor associated 72.2 1.3 4.4E-05 43.1 1.6 34 64-99 191-224 (228)
68 2foj_A Ubiquitin carboxyl-term 66.2 1.7 5.9E-05 39.1 1.0 34 64-97 114-147 (155)
69 2eqx_A Kelch repeat and BTB do 56.2 5.5 0.00019 33.6 2.3 33 235-268 6-38 (105)
70 2vkp_A BTB/POZ domain-containi 54.1 6.3 0.00022 32.7 2.4 34 270-307 76-109 (109)
71 3i3n_A Kelch-like protein 11; 52.5 12 0.0004 36.9 4.4 95 237-335 139-251 (279)
72 3mbr_X Glutamine cyclotransfer 38.8 1.4E+02 0.0048 29.0 9.7 68 431-502 31-112 (243)
73 3htm_A Speckle-type POZ protei 37.8 14 0.00046 33.2 2.0 31 237-268 132-162 (172)
74 2z8h_A Transcription regulator 34.1 9 0.00031 33.5 0.2 35 270-308 100-134 (138)
75 1r29_A B-cell lymphoma 6 prote 33.4 18 0.00061 30.9 2.0 33 270-306 94-126 (127)
76 2r9r_B Paddle chimera voltage 30.5 38 0.0013 36.7 4.4 50 207-259 91-141 (514)
77 2yy9_A Zinc finger and BTB dom 29.7 11 0.00037 33.0 -0.1 38 270-311 86-123 (135)
78 3hve_A Gigaxonin; ubiquitin, c 28.2 41 0.0014 32.3 3.9 92 270-391 98-189 (256)
79 1buo_A POZ domain, protein (pr 27.1 34 0.0012 28.9 2.6 33 270-306 88-120 (121)
80 3hqi_A Speckle-type POZ protei 26.6 25 0.00087 34.9 2.0 31 237-268 272-302 (312)
81 2q81_A MIZ-1 protein; BTB/POZ 26.2 29 0.00099 29.3 2.0 31 270-304 87-117 (119)
82 3b84_A Zinc finger and BTB dom 25.3 18 0.00061 30.7 0.5 33 270-306 85-117 (119)
83 2vpk_A Myoneurin; transcriptio 24.3 33 0.0011 28.6 2.0 31 270-304 85-115 (116)
84 2if5_A Zinc finger and BTB dom 22.4 40 0.0014 28.2 2.2 30 270-303 90-119 (120)
No 1
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=100.00 E-value=2.3e-44 Score=367.88 Aligned_cols=248 Identities=20% Similarity=0.333 Sum_probs=227.1
Q ss_pred cCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEEE-----EEEeeeeeccccCCccccccccccccccchhhhHHHHHHH
Q 007977 117 ESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVK-----TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVI 191 (582)
Q Consensus 117 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v~-----~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~ 191 (582)
..+.|...+++.|++++. .+.+|||+|.++ +|+|||.|||++|+||++
T Consensus 11 ~~~~h~~~ll~~l~~l~~-----~~~~~Dv~l~v~~~~~~~f~~Hr~vLaa~S~yF~~---------------------- 63 (279)
T 3i3n_A 11 ECSSHCSELSWRQNEQRR-----QGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTP---------------------- 63 (279)
T ss_dssp ECTTHHHHHHHHHHHHHH-----HTTTCCEEEECC----CEEEECHHHHHHHCTTSGG----------------------
T ss_pred CCHhHHHHHHHHHHHHHh-----cCCCCCeEEEEcCCCCeEEehHHHHHHHcCHHHHH----------------------
Confidence 467889999999999998 677999999984 699999999999999999
Q ss_pred HHHHHHhhccCcccCCccEEEEec----CCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcc
Q 007977 192 LCIFLQLFSNGMRESEQRYVTLRI----HASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 267 (582)
Q Consensus 192 ~~~~~~mf~~~~~Es~~~~v~l~~----~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~ 267 (582)
||+++|+|+.+..|+|++ +++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.
T Consensus 64 ------mf~~~~~e~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~~L~~~c~~~L~ 136 (279)
T 3i3n_A 64 ------LLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVST-GSVHEVLELADRFLLIRLKEFCGEFLK 136 (279)
T ss_dssp ------GCCC--------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ------HhcCCCccccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCH-HHHHHHHHHHHHHCcHHHHHHHHHHHH
Confidence 999999999999999862 279999999999999999999998 999999999999999999999999999
Q ss_pred cCcCCccchhhhccccchhhhhhhhhhHHHHHHHHHHHhhhhhhhhhHhhcCCCHHHHHHHhcCCCccccchhhHHHHHH
Q 007977 268 NLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFAL 347 (582)
Q Consensus 268 ~l~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~f~~v~~~~~~f~~L~~~~l~~lL~sd~L~V~sE~~Vf~aVl 347 (582)
+ .++++||+.++.+|+.| ++..|.+.|.+||.+||.++.+ +++|.+||.+.+..||++|+|+|.+|.+||++++
T Consensus 137 ~-~l~~~n~~~i~~~A~~~----~~~~L~~~~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~ 210 (279)
T 3i3n_A 137 K-KLHLSNCVAIHSLAHMY----TLSQLALKAADMIRRNFHKVIQ-DEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVL 210 (279)
T ss_dssp H-HCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTHHHHTT-SSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHH
T ss_pred H-cCCcchHHHHHHHHHHc----CcHHHHHHHHHHHHHHHHHHhc-CcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHH
Confidence 9 89999999999999998 7899999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHhhcCCChhhHHhhhcccccccccCCCCCHHHHhhhcccCCCC--chHHHHHHHHHHhhhc
Q 007977 348 KWARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD--PELASKVVLESLFFKA 408 (582)
Q Consensus 348 ~Wi~~d~~~~~~R~~~l~~~LL~~VRfplls~~~L~~~v~~~~l~--~~~~~~ll~eA~~~h~ 408 (582)
+|++|+ +++|++++ ++||++||||+|++++|.+.+..+++. ++.|++++.+|++||.
T Consensus 211 ~W~~~~---~~~r~~~~-~~ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~ 269 (279)
T 3i3n_A 211 KWVQRN---AEERERYF-EELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHA 269 (279)
T ss_dssp HHHHTT---HHHHTTTH-HHHHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHcC---HHHHHHHH-HHHHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhcc
Confidence 999999 88999998 899999999999999999999888775 7899999999999998
No 2
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=3.9e-43 Score=354.18 Aligned_cols=238 Identities=17% Similarity=0.293 Sum_probs=198.6
Q ss_pred CchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHH
Q 007977 118 SPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIF 195 (582)
Q Consensus 118 ~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (582)
.+.|...+++.|++++. .+.+|||+|.+ ++|+|||.|||++||||++
T Consensus 11 ~~~~~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~f~~Hr~vLaa~S~yF~~-------------------------- 59 (256)
T 3hve_A 11 DPQHAARLLRALSSFRE-----ESRFCDAHLVLDGEEIPVQKNILAAASPYIRT-------------------------- 59 (256)
T ss_dssp CTTTHHHHHHHHHTCCC-------CCCCEEEEETTEEEEECHHHHHTTCHHHHH--------------------------
T ss_pred ChHHHHHHHHHHHHHHh-----cCCCcceEEEECCEEEechHHHHHHcCHHHHH--------------------------
Confidence 56788889999999887 66799999999 4899999999999999999
Q ss_pred HHhhccCcc--cCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcccCcCCc
Q 007977 196 LQLFSNGMR--ESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTC 273 (582)
Q Consensus 196 ~~mf~~~~~--Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~l~l~~ 273 (582)
||++++. |+.+..|.++ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+ .+++
T Consensus 60 --mf~~~~~~~e~~~~~i~l~--~v~~~~f~~ll~~~Yt~~~~i~~-~~v~~ll~~A~~l~i~~l~~~c~~~L~~-~l~~ 133 (256)
T 3hve_A 60 --KLNYNPPKDDGSTYKIELE--GISVMVMREILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLEG-CIAA 133 (256)
T ss_dssp --TC-----------CEEECS--SCCHHHHHHHHHHHHHSCCCCC--CCHHHHHHHHHHHTCHHHHHHHHHHHHH-TCCS
T ss_pred --HhCCCCCcccCCCCeEEeC--CCCHHHHHHHHhhccCCCCcccH-hHHHHHHHHHHHHChHHHHHHHHHHHHh-hCCH
Confidence 9999987 5666778877 99999999999999999999999 9999999999999999999999999999 8999
Q ss_pred cchhhhccccchhhhhhhhhhHHHHHHHHHHHhhhhhhhhhHhhcCCCHHHHHHHhcCCCccccchhhHHHHHHHHHhhc
Q 007977 274 ESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKWARTH 353 (582)
Q Consensus 274 ~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~f~~v~~~~~~f~~L~~~~l~~lL~sd~L~V~sE~~Vf~aVl~Wi~~d 353 (582)
+||+.++.+|+.| ++..|.+.|.+||.+||.++.+ +++|.+||.+.+..||++|+|+|.+|.+||+++++|++|+
T Consensus 134 ~n~~~i~~~A~~~----~~~~L~~~~~~~i~~~f~~v~~-~~~f~~L~~~~l~~lL~~d~L~v~~E~~v~~av~~W~~~~ 208 (256)
T 3hve_A 134 ENCIGIRDFALHY----CLHHVHYLATEYLETHFRDVSS-TEEFLELSPQKLKEVISLEKLNVGNERYVFEAVIRWIAHD 208 (256)
T ss_dssp STTHHHHHHHHHT----TCHHHHHHHHHHHHHHHHHHTT-CHHHHSSCHHHHHHHHHCC-------CTTHHHHTTTCCC-
T ss_pred hhHHHHHHHHHHc----CcHHHHHHHHHHHHHHHHHHhC-CcchhcCCHHHHHHHHccCCCCCCCHHHHHHHHHHHHHcC
Confidence 9999999999998 7899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred CCChhhHHhhhcccccccccCCCCCHHHHhhhcccCCCC--c-hHHHHHHH
Q 007977 354 YPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD--P-ELASKVVL 401 (582)
Q Consensus 354 ~~~~~~R~~~l~~~LL~~VRfplls~~~L~~~v~~~~l~--~-~~~~~ll~ 401 (582)
+++|++++ ++||++||||+|++++|.+.++.+++. + +.|++++.
T Consensus 209 ---~~~R~~~~-~~ll~~VRf~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~ 255 (256)
T 3hve_A 209 ---TEIRKVHM-KDVMSALWVSGLDSSYLREQMLNEPLVREIVKECSNIPL 255 (256)
T ss_dssp ----CCSTTTH-HHHHHHHHHHTTCC-CHHHHHHTSTTHHHHHCC------
T ss_pred ---HHHHHHHH-HHHHHhCCCCCCCHHHHHHHHhcChHHHhhHHHHHHHhh
Confidence 77899998 899999999999999999999988886 3 35887764
No 3
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.96 E-value=5.7e-30 Score=265.01 Aligned_cols=205 Identities=23% Similarity=0.325 Sum_probs=166.2
Q ss_pred hhhcccccchhhhcccCcceecccceeeeccccCCCCCccccCCCCCCCceeecCchhHHHhHHHHHHHhcCCCCCCCCc
Q 007977 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTEDGVAYENQDDEPEAMVEESPADVGLNLKQCEEATGNIDPAWSMD 143 (582)
Q Consensus 64 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~ 143 (582)
+||+.+|++|++|++....++.+|+.+++|...+..+....+ ..+....+..||++....+..|.+. ..+
T Consensus 105 ~wG~~~Fi~~~~L~~~~~~yl~dD~l~i~~~v~v~~~~~~~~--~~~~~~~~~~p~~~l~~~l~~l~~~--------~~~ 174 (312)
T 3hqi_A 105 DWGFKKFIRRGFLLDEANGLLPDDKLTLFCEVSVVQDSVNIS--GQNTMNMVKVPECRLADELGGLWEN--------SRF 174 (312)
T ss_dssp EEEEEEEEEHHHHTCGGGCCCGGGCEEEEEEEEEEEECCCEE--CCCCCSSCCCCCCCHHHHHHHHHHT--------TCS
T ss_pred CcCHHHhccHHHhhccccCeecCCEEEEEEEEEEEecccccc--ccccccccCCCCchHHHHHHHHHhC--------CCC
Confidence 599999999999976554589999999999887664321111 1223345667787766656554443 348
Q ss_pred eeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHHHhhccCcccCCccEEEEecCCCCHH
Q 007977 144 LSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEA 221 (582)
Q Consensus 144 ~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~~~~Es~~~~v~l~~~~v~~~ 221 (582)
+||+|.+ ++|+|||.|||++||||++ ||.++|+|+.+..|.|+ +++++
T Consensus 175 ~Dv~l~v~~~~f~~Hk~vLaa~S~~F~~----------------------------~f~~~~~e~~~~~i~l~--~~~~~ 224 (312)
T 3hqi_A 175 TDCCLCVAGQEFQAHKAILAARSPVFSA----------------------------MFEHEMEESKKNRVEIN--DVEPE 224 (312)
T ss_dssp CCEEEEETTEEEEECHHHHHHHCHHHHH----------------------------HTTC-----CCSEEEEC--SSCHH
T ss_pred CceEEEECCEEEeHHHHHHHHcCHHHHH----------------------------HhccCccccCCceEEec--CCCHH
Confidence 9999999 5899999999999999999 99999999999999998 99999
Q ss_pred HHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcccCcCCccchhhhccccchhhhhhhhhhHHHHHHH
Q 007977 222 ALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQ 301 (582)
Q Consensus 222 ~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~l~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~ 301 (582)
+|+.+|+|||||++.++. +++.+||.+|++|+++.|+..|+++|.+ .++.+||+.++.+|+.| ++..|+++|++
T Consensus 225 ~f~~~L~~iYt~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~~~~~n~~~~l~~A~~~----~~~~L~~~~~~ 298 (312)
T 3hqi_A 225 VFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NLSVENAAEILILADLH----SADQLKTQAVD 298 (312)
T ss_dssp HHHHHHHHHHHSCCTTHH-HHHHHHHHHHHHTTCHHHHHHHHHHHHT-TCCTTTHHHHHHHHHHT----TCHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCChH-HHHHHHHHHHHHhCHHHHHHHHHHHHHc-cCCHHHHHHHHHHHHHh----CCHHHHHHHHH
Confidence 999999999999999988 8999999999999999999999999999 79999999999999998 78999999999
Q ss_pred HHHHhhhhhhhhhH
Q 007977 302 FLAARYKDISKFQE 315 (582)
Q Consensus 302 fi~~~f~~v~~~~~ 315 (582)
||..||.++++ ++
T Consensus 299 ~i~~~~~~v~~-s~ 311 (312)
T 3hqi_A 299 FINYHATDVLE-TS 311 (312)
T ss_dssp HHHHTC--------
T ss_pred HHHHHHHHHhh-CC
Confidence 99999999987 55
No 4
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.93 E-value=3.8e-26 Score=215.60 Aligned_cols=157 Identities=24% Similarity=0.324 Sum_probs=136.0
Q ss_pred eeecCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHH
Q 007977 114 MVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVI 191 (582)
Q Consensus 114 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~ 191 (582)
.+..|++.....+..+.+... +|||+|.+ ++|+|||.||+++|+||++
T Consensus 13 ~~~~p~~~l~~~l~~l~~~~~--------~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~---------------------- 62 (172)
T 3htm_A 13 MVKVPECRLADELGGLWENSR--------FTDCCLCVAGQEFQAHKAILAARSPVFSA---------------------- 62 (172)
T ss_dssp CSCCCCCCHHHHHHHHHHHTC--------SCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------
T ss_pred cCCCCHHHHHHHHHHHHhCCC--------CcceEEEECCEEEEeeHHHHHHcCHHHHH----------------------
Confidence 445566666655555554443 89999999 4899999999999999999
Q ss_pred HHHHHHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcccCcC
Q 007977 192 LCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM 271 (582)
Q Consensus 192 ~~~~~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~l~l 271 (582)
||+++++|+.+..|.|+ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+ .+
T Consensus 63 ------~f~~~~~e~~~~~i~l~--~~~~~~f~~~l~~~Yt~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l 132 (172)
T 3htm_A 63 ------MFEHEMEESKKNRVEIN--DVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NL 132 (172)
T ss_dssp ------HHHSCCCGGGTTEEEEC--SSCHHHHHHHHHHHHHSCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHHHHHH-TC
T ss_pred ------HHccCccccCCCeEEec--CCCHHHHHHHHHHHhCCCCCCcH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hC
Confidence 99999999999999998 99999999999999999999988 9999999999999999999999999999 79
Q ss_pred CccchhhhccccchhhhhhhhhhHHHHHHHHHHHhhhhhhhhhH
Q 007977 272 TCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQE 315 (582)
Q Consensus 272 ~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~f~~v~~~~~ 315 (582)
+.+||+.++.+|..| ++..|++.|.+||.+||.++.+ ++
T Consensus 133 ~~~n~~~~~~~A~~~----~~~~L~~~~~~~i~~~~~~v~~-s~ 171 (172)
T 3htm_A 133 SVENAAEILILADLH----SADQLKTQAVDFINYHATDVLE-TS 171 (172)
T ss_dssp CTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTC--------
T ss_pred CHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHHHHHHHc-CC
Confidence 999999999999998 7899999999999999999987 54
No 5
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.88 E-value=1.3e-23 Score=192.77 Aligned_cols=139 Identities=25% Similarity=0.331 Sum_probs=100.0
Q ss_pred eeecCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHH
Q 007977 114 MVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVI 191 (582)
Q Consensus 114 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~ 191 (582)
.++.||+.....++.+.+.+. +|||++.+ ++|+|||.||+++|+||++
T Consensus 4 ~v~~p~~~l~~~l~~l~~~~~--------~~Dv~l~v~~~~~~~Hk~iL~~~S~~F~~---------------------- 53 (145)
T 4eoz_A 4 MVKVPECRLADELGGLWENSR--------FTDCCLCVAGQEFQAHKAILAARSPVFSA---------------------- 53 (145)
T ss_dssp -CCCCCCCHHHHHHHHHHHTC--------SCCEEEEETTEEEEECHHHHHHHCHHHHH----------------------
T ss_pred cccCChHHHHHHHHHHHhCCC--------CcceEEEECCEEEEeehHHHHHcCHHHHH----------------------
Confidence 345567666666655554443 89999999 4899999999999999999
Q ss_pred HHHHHHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcccCcC
Q 007977 192 LCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM 271 (582)
Q Consensus 192 ~~~~~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~l~l 271 (582)
||++++.|+.+..|.++ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+ .+
T Consensus 54 ------~f~~~~~e~~~~~i~l~--~~~~~~~~~~l~~~Y~~~~~~~~-~~~~~ll~~A~~~~~~~l~~~c~~~l~~-~l 123 (145)
T 4eoz_A 54 ------MFEHEMEESKKNRVEIN--DVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALERLKVMCEDALCS-NL 123 (145)
T ss_dssp ------HHHSSSHHHHHTEEEEC--SSCHHHHHHHHHHHHHSCCTTGG-GTHHHHHHHHHHTTCHHHHHHHHCC------
T ss_pred ------HHcCCCcCCCCceEEec--CCCHHHHHHHHHhhccCccCCcH-HHHHHHHHHHHHhCHHHHHHHHHHHHHH-hC
Confidence 99999999888899998 89999999999999999999988 8999999999999999999999999999 79
Q ss_pred CccchhhhccccchhhhhhhhhhHH
Q 007977 272 TCESALLYLDLPSSVLMADAVQPLT 296 (582)
Q Consensus 272 ~~~n~~~~l~la~~~~~~~~~~~L~ 296 (582)
+.+||+.++.+|+.| ++..|+
T Consensus 124 ~~~n~~~~l~~A~~~----~~~~Lk 144 (145)
T 4eoz_A 124 SVENAAEILILADLH----SADQLK 144 (145)
T ss_dssp -------------------------
T ss_pred CHHHHHHHHHHHHHh----CHHHhc
Confidence 999999999999998 566665
No 6
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.84 E-value=8.5e-22 Score=175.68 Aligned_cols=114 Identities=27% Similarity=0.382 Sum_probs=101.5
Q ss_pred CchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHH
Q 007977 118 SPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIF 195 (582)
Q Consensus 118 ~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (582)
.|.|...+++.+++++. .+.+|||++.+ ++|+|||.|||++||||++
T Consensus 5 ~~~h~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~~~aHk~vLaa~S~~F~~-------------------------- 53 (120)
T 2if5_A 5 FPDHSSDILSGLNEQRT-----QGLLCDVVILVEGREFPTHRSVLAACSQYFKK-------------------------- 53 (120)
T ss_dssp CTTHHHHHHHHHHHHHH-----TTCSCCEEEEETTEEEEECHHHHHHHCHHHHH--------------------------
T ss_pred ccchHHHHHHHHHHHHh-----cCCCCCeEEEECCEEEeHHHHHHHHhCHHHHH--------------------------
Confidence 46788888999999987 56799999999 4899999999999999999
Q ss_pred HHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcc
Q 007977 196 LQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 267 (582)
Q Consensus 196 ~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~ 267 (582)
||++++.|+.+..|.++ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.
T Consensus 54 --~f~~~~~e~~~~~i~l~--~~~~~~f~~ll~~~Yt~~~~~~~-~~~~~ll~~A~~~~i~~L~~~C~~~L~ 120 (120)
T 2if5_A 54 --LFTSGAVVDQQNVYEID--FVSAEALTALMDFAYTATLTVST-ANVGDILSAARLLEIPAVSHVCADLLD 120 (120)
T ss_dssp --HHHC-----CCSEEECC--SSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHTTCHHHHHHHHHHHC
T ss_pred --HhcCCccccCCceEEeC--CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 99999999988999998 89999999999999999999998 999999999999999999999999874
No 7
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.84 E-value=1.9e-21 Score=178.07 Aligned_cols=123 Identities=16% Similarity=0.166 Sum_probs=109.2
Q ss_pred ecCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHH
Q 007977 116 EESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILC 193 (582)
Q Consensus 116 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (582)
-..+.|...+++.|++++. .+.+|||+|.+ ++|+|||+|||++|+||++
T Consensus 14 ~~~~~~~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~------------------------ 64 (138)
T 2z8h_A 14 YESSVHSTNVLLSLNDQRK-----KDVLCDVTVLVEGQRFRAHRSVLAACSSYFHS------------------------ 64 (138)
T ss_dssp CCCSSHHHHHHHHHHHHHH-----HTCSCCEEEEETTEEEEECHHHHHHHCHHHHH------------------------
T ss_pred ecCCchHHHHHHHHHHHHh-----hCCCcCeEEEECCEEEechHHHHHHcCHHHHH------------------------
Confidence 3456777888888888887 56699999999 4899999999999999999
Q ss_pred HHHHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcccCcCCc
Q 007977 194 IFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTC 273 (582)
Q Consensus 194 ~~~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~l~l~~ 273 (582)
||.+++.|+ ..|.++ +++++++|+.+|+|||||++.++. +++.+|+.+|++|+++.|++.|+++|.+ .++.
T Consensus 65 ----~f~~~~~e~--~~i~l~-~~v~~~~~~~lL~~~Ytg~~~i~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~-~l~~ 135 (138)
T 2z8h_A 65 ----RIVGQTDAE--LTVTLP-EEVTVKGFEPLIQFAYTAKLILSK-DNVDEVCRCVEFLSVHNIEESCFQFLKF-KFLD 135 (138)
T ss_dssp ----HHTTCCCTT--EEEECC-TTSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHHTCGGGHHHHHHHTTC-CCSC
T ss_pred ----HHhcCCCCC--ceEEeC-CCCCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH-hccc
Confidence 999998763 466663 389999999999999999999998 9999999999999999999999999999 7988
Q ss_pred cch
Q 007977 274 ESA 276 (582)
Q Consensus 274 ~n~ 276 (582)
+|+
T Consensus 136 sna 138 (138)
T 2z8h_A 136 STS 138 (138)
T ss_dssp CCC
T ss_pred ccC
Confidence 874
No 8
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.83 E-value=3.3e-21 Score=173.68 Aligned_cols=115 Identities=17% Similarity=0.325 Sum_probs=106.2
Q ss_pred cCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHH
Q 007977 117 ESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCI 194 (582)
Q Consensus 117 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (582)
+.+.|...+++.|++++. .+.+|||+|.+ ++|+|||+|||++||||++
T Consensus 8 ~~~~~~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~~~aHk~iLaa~S~~F~~------------------------- 57 (127)
T 1r29_A 8 QFTRHASDVLLNLNRLRS-----RDILTDVVIVVSREQFRAHKTVLMACSGLFYS------------------------- 57 (127)
T ss_dssp CCTTHHHHHHHHHHHHHH-----TTCSCCEEEEETTEEEEECHHHHHHHCHHHHH-------------------------
T ss_pred cchhHHHHHHHHHHHHHh-----cCCCCCEEEEECCEEEehHHHHHHHhCHHHHH-------------------------
Confidence 356788888999999987 66799999999 4899999999999999999
Q ss_pred HHHhhccCcccCCccEEEE-ecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 195 FLQLFSNGMRESEQRYVTL-RIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 195 ~~~mf~~~~~Es~~~~v~l-~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
||++++.| .+..|.| + ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 58 ---~f~~~~~e-~~~~i~l~~--~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 125 (127)
T 1r29_A 58 ---IFTDQLKR-NLSVINLDP--EINPEGFNILLDFMYTSRLNLRE-GNIMAVMATAMYLQMEHVVDTCRKFIKA 125 (127)
T ss_dssp ---HHTSTTTT-TCSEEECCT--TSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred ---HhcCCccC-CCCEEEeCC--CCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 99999998 7788888 6 99999999999999999999998 9999999999999999999999999975
No 9
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.82 E-value=3.8e-21 Score=172.81 Aligned_cols=115 Identities=20% Similarity=0.254 Sum_probs=104.7
Q ss_pred eeecCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHH
Q 007977 114 MVEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVI 191 (582)
Q Consensus 114 ~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~ 191 (582)
..-..+.|...+++.|+++++ .+.+|||+|.+ ++|+|||.|||++|+||++
T Consensus 8 ~~~~~~~~~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~---------------------- 60 (125)
T 3ohu_A 8 YVYESTVHCTNILLGLNDQRK-----KDILCDVTLIVERKEFRAHRAVLAACSEYFWQ---------------------- 60 (125)
T ss_dssp EEEECSSHHHHHHHHHHHHHH-----HTCSCCEEEEETTEEEEECHHHHHHHBHHHHH----------------------
T ss_pred eeeecHHHHHHHHHHHHHHHh-----cCCccceEEEECCEEEechHHHHHHcCHHHHH----------------------
Confidence 445577889999999999987 56799999999 4899999999999999999
Q ss_pred HHHHHHhhccCcccCCccEEEEecCC-CCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhc
Q 007977 192 LCIFLQLFSNGMRESEQRYVTLRIHA-SEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLL 266 (582)
Q Consensus 192 ~~~~~~mf~~~~~Es~~~~v~l~~~~-v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L 266 (582)
||.+++.| +..|.++ + +++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||
T Consensus 61 ------~f~~~~~e--~~~i~l~--~~~~~~~f~~~l~~iYtg~~~~~~-~~v~~ll~~A~~l~i~~L~~~C~~~L 125 (125)
T 3ohu_A 61 ------ALVGQTKN--DLVVSLP--EEVTARGFGPLLQFAYTAKLLLSR-ENIREVIRCAEFLRMHNLEDSCFSFL 125 (125)
T ss_dssp ------HHTTCCCS--SCEEECC--TTCCHHHHHHHHHHHTTSEEEECT-TTHHHHHHHHHHHTBSSCTTSSCCCC
T ss_pred ------HhcCCCCC--CcEEEeC--CCCCHHHHHHHHHhHcCCceEECH-HHHHHHHHHHHHhCCHHHHHHHHHhC
Confidence 99998876 5678877 6 9999999999999999999999 99999999999999999999999986
No 10
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.82 E-value=5.4e-21 Score=176.72 Aligned_cols=117 Identities=18% Similarity=0.269 Sum_probs=102.1
Q ss_pred eecCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHH
Q 007977 115 VEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVIL 192 (582)
Q Consensus 115 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (582)
.-..|.+...+++.|++++. .+.+|||+|.+ ++|+|||+|||++|+||++
T Consensus 24 ~~~~~~h~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------- 75 (144)
T 2ppi_A 24 AVSDPQHAARLLRALSSFRE-----ESRFCDAHLVLDGEEIPVQKNILAAASPYIRT----------------------- 75 (144)
T ss_dssp CCCCTTHHHHHHHHHHHTTC-------CCCCEEEEETTEEEEECHHHHHHHCHHHHH-----------------------
T ss_pred eecCcchHHHHHHHHHHHHh-----cCCCcceEEEECCEEEehHHHHHHHcCHHHHH-----------------------
Confidence 33467888899999999987 66799999999 4899999999999999999
Q ss_pred HHHHHhhccCccc--CCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcc
Q 007977 193 CIFLQLFSNGMRE--SEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 267 (582)
Q Consensus 193 ~~~~~mf~~~~~E--s~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~ 267 (582)
||++++.| +....|.|+ ++++++|+.+|+|||||++.++. +++.+|+.+|++|+++.|++.|++||+
T Consensus 76 -----mf~~~~~e~e~~~~~I~l~--~v~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~L~ 144 (144)
T 2ppi_A 76 -----KLNYNPPKDDGSTYKIELE--GISVMVMREILDYIFSGQIRLNE-DTIQDVVQAADLLLLTDLKTLCCEFLE 144 (144)
T ss_dssp -----HHHHCC-----CCCEEECC--SSCHHHHHHHHHHHTTSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHTTC-
T ss_pred -----HHcCCCccccCCCcEEEeC--CCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHhC
Confidence 99998876 556778877 89999999999999999999998 999999999999999999999999984
No 11
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.82 E-value=3.6e-21 Score=171.84 Aligned_cols=110 Identities=23% Similarity=0.275 Sum_probs=99.7
Q ss_pred chhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHH
Q 007977 119 PADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFL 196 (582)
Q Consensus 119 ~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (582)
|.|...+++.|++++. .+.+|||++.+ ++|+|||.|||++||||++
T Consensus 5 ~~h~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~--------------------------- 52 (119)
T 3b84_A 5 VQHSVRVLQELNKQRE-----KGQYCDATLDVGGLVFKAHWSVLACCSHFFQS--------------------------- 52 (119)
T ss_dssp HHHHHHHHHHHHHHHH-----HTCSCCEEEEETTEEEEECHHHHHHHCHHHHH---------------------------
T ss_pred chHHHHHHHHHHHHHh-----cCCCcceEEEECCEEEEeeHHHHhhcCHHHHH---------------------------
Confidence 5677888889999887 56799999999 4899999999999999999
Q ss_pred HhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 197 QLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 197 ~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
||.+++ +..|.|+ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 53 -~f~~~~----~~~i~l~--~~~~~~f~~ll~~iYtg~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (119)
T 3b84_A 53 -LYGDGS----GGSVVLP--AGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAARELRVPEAVELCQSFKPK 116 (119)
T ss_dssp -HHTTTT----CCCEEEC--GGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCC--
T ss_pred -HHCCCC----CCeEEeC--CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 999876 4678888 89999999999999999999998 9999999999999999999999999976
No 12
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.82 E-value=4e-21 Score=175.55 Aligned_cols=116 Identities=22% Similarity=0.280 Sum_probs=98.2
Q ss_pred CchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHH
Q 007977 118 SPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIF 195 (582)
Q Consensus 118 ~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (582)
++.|...+++.|++++. .+.+|||+|.+ ++|+|||.|||++|+||++
T Consensus 5 ~~~h~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~-------------------------- 53 (135)
T 2yy9_A 5 SSGHSVRVLQELNKQRE-----KGQYCDATLDVGGLVFKAHWSVLACCSHFFQR-------------------------- 53 (135)
T ss_dssp --CHHHHHHHHHHHHHH-----TTTTCCEEEEETTEEEEECHHHHHHHCHHHHH--------------------------
T ss_pred cccHHHHHHHHHHHHHh-----cCCCcceEEEECCEEEehHHHHHHHhCHHHHH--------------------------
Confidence 56788889999999998 67799999999 4899999999999999999
Q ss_pred HHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcccCcCCcc
Q 007977 196 LQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCE 274 (582)
Q Consensus 196 ~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~l~l~~~ 274 (582)
||.+++ +..|.|+ ++++++|+.+|+|||||++.++. +++.+|+.+|++|+++.|++.|+++|.+ .+...
T Consensus 54 --mf~~~~----~~~i~l~--~~~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~~L~~~C~~~l~~-~l~~~ 122 (135)
T 2yy9_A 54 --IYGDGT----GGSVVLP--AGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAAKELRVPEAVELCQSFQPQ-TSVGQ 122 (135)
T ss_dssp --TCC--------CCEEEC--GGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHCCC-------
T ss_pred --HHcCCC----CCeEEeC--CCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH-hccCC
Confidence 999876 4568887 89999999999999999999998 9999999999999999999999999988 55543
No 13
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.81 E-value=8.5e-21 Score=168.29 Aligned_cols=112 Identities=16% Similarity=0.249 Sum_probs=100.3
Q ss_pred chhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHH
Q 007977 119 PADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFL 196 (582)
Q Consensus 119 ~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (582)
|.|...+++.|++++. .+.+|||++.+ ++|+|||.|||++||||++
T Consensus 3 ~~h~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~--------------------------- 50 (116)
T 2vpk_A 3 SHHCEHLLERLNKQRE-----AGFLCDCTIVIGEFQFKAHRNVLASFSEYFGA--------------------------- 50 (116)
T ss_dssp HHHHHHHHHHHHHHHH-----HTCSCCEEEEETTEEEEECHHHHHHHCHHHHH---------------------------
T ss_pred hhHHHHHHHHHHHHHh-----cCCCCcEEEEECCEEEeccHHHHhhcCHHHHH---------------------------
Confidence 5678888899999887 56799999999 4899999999999999999
Q ss_pred HhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 197 QLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 197 ~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
||+++ .+..|.|+.+++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 51 -~f~~~----~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~-~~v~~ll~~A~~~~i~~L~~~C~~~l~~ 116 (116)
T 2vpk_A 51 -IYRST----SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDS-WNVKEIHQAADYLKVEEVVTKCKIKMED 116 (116)
T ss_dssp -HHTTC----CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred -HHcCC----CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 99986 355677765589999999999999999999998 9999999999999999999999999863
No 14
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.81 E-value=9.8e-21 Score=170.24 Aligned_cols=114 Identities=17% Similarity=0.197 Sum_probs=98.8
Q ss_pred cCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHH
Q 007977 117 ESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCI 194 (582)
Q Consensus 117 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (582)
+.+.|...+++.|++++. .+.+|||+|.+ ++|+|||.|||++||||++
T Consensus 8 ~~~~~~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~------------------------- 57 (124)
T 2ihc_A 8 ESSVHSTNVLLSLNDQRK-----KDVLCDVTIFVEGQRFRAHRSVLAACSSYFHS------------------------- 57 (124)
T ss_dssp ECSSHHHHHHHHHHHHHH-----HTCSCCEEEEETTEEEEECHHHHHHHBHHHHH-------------------------
T ss_pred cCcchHHHHHHHHHHHHh-----cCCCcCEEEEECCEEEecHHHHHHHcCHHHHH-------------------------
Confidence 456777888888888887 56699999999 4899999999999999999
Q ss_pred HHHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcc
Q 007977 195 FLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 267 (582)
Q Consensus 195 ~~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~ 267 (582)
||++++.|+ ..|.++ +++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||+
T Consensus 58 ---mf~~~~~e~--~~i~l~-~~v~~~~f~~lL~~iYtg~~~i~~-~~v~~ll~~A~~~~~~~L~~~C~~~l~ 123 (124)
T 2ihc_A 58 ---RIVGQADGE--LNITLP-EEVTVKGFEPLIQFAYTAKLILSK-ENVDEVCKCVEFLSVHNIEESCFQFLK 123 (124)
T ss_dssp ---HHTTC---C--EEEECC-TTSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHHTBSSCCGGGGGTC-
T ss_pred ---HHcCCCCCC--ceEeec-CCcCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHHCCHHHHHHHHHHHh
Confidence 999998764 466663 389999999999999999999998 999999999999999999999999985
No 15
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.80 E-value=2.3e-20 Score=166.98 Aligned_cols=110 Identities=23% Similarity=0.311 Sum_probs=100.1
Q ss_pred CchhHHHhHHHHHHHhcCCCCCCCCceeEEEEEE--EEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHH
Q 007977 118 SPADVGLNLKQCEEATGNIDPAWSMDLSTVLRVK--TVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIF 195 (582)
Q Consensus 118 ~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v~--~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (582)
.|.|...+++.|++++. .+.+|||++.++ +|+|||.|||++||||++
T Consensus 8 ~~~~~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~-------------------------- 56 (121)
T 1buo_A 8 NPSHPTGLLCKANQMRL-----AGTLCDVVIMVDSQEFHAHRTVLACTSKMFEI-------------------------- 56 (121)
T ss_dssp CTTHHHHHHHHHHHHHH-----HTTTCCEEEEESSCEEEECHHHHHHHCHHHHH--------------------------
T ss_pred CcchHHHHHHHHHHHHh-----cCCCCCEEEEECCEEEehhHHHHhhcCHHHHH--------------------------
Confidence 56778888888898887 567899999994 799999999999999999
Q ss_pred HHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 196 LQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 196 ~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
||+++ +..|.++ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 57 --~f~~~-----~~~i~l~--~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~ll~~A~~~~i~~L~~~c~~~l~~ 119 (121)
T 1buo_A 57 --LFHRN-----SQHYTLD--FLSPKTFQQILEYAYTATLQAKA-EDLDDLLYAAEILEIEYLEEQCLKMLET 119 (121)
T ss_dssp --HTTSC-----CSEEEEC--SSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred --HHcCC-----CcEEEeC--CCCHHHHHHHHHhhcCCCcCCCH-HHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 99874 4578887 99999999999999999999998 9999999999999999999999999976
No 16
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.79 E-value=2.9e-20 Score=162.66 Aligned_cols=97 Identities=27% Similarity=0.426 Sum_probs=85.1
Q ss_pred CCCceeEEEEE------EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHHHhhccCcccCCccEEEE
Q 007977 140 WSMDLSTVLRV------KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTL 213 (582)
Q Consensus 140 ~~~~~DV~l~v------~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~~~~Es~~~~v~l 213 (582)
.+.+|||++.+ +.|+|||.|||++||||++ ||+++++|+. ..|.+
T Consensus 5 ~~~~~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~~F~~----------------------------~f~~~~~e~~-~~i~l 55 (109)
T 2vkp_A 5 NELMADVHFVVGPPGATRTVPAHKYVLAVGSSVFYA----------------------------MFYGDLAEVK-SEIHI 55 (109)
T ss_dssp CCTTCCEEEEESSTTSCEEEEECHHHHHHHCHHHHH----------------------------HHC------C-CEEEE
T ss_pred CCCcccEEEEECCCCCcEEEEeeHHHHHHcCHHHHH----------------------------HhcCCcccCC-CeEEe
Confidence 34589999988 3799999999999999999 9999999988 88888
Q ss_pred ecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 214 RIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 214 ~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
+ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|+++|.+
T Consensus 56 ~--~~~~~~f~~~l~~iYt~~~~~~~-~~~~~ll~~A~~~~~~~L~~~c~~~l~~ 107 (109)
T 2vkp_A 56 P--DVEPAAFLILLKYMYSDEIDLEA-DTVLATLYAAKKYIVPALAKACVNFLET 107 (109)
T ss_dssp T--TSCHHHHHHHHHHHHHCCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred C--CCCHHHHHHHHHHHcCCCccCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 7 99999999999999999999999 9999999999999999999999999976
No 17
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.78 E-value=5.5e-20 Score=166.34 Aligned_cols=113 Identities=20% Similarity=0.247 Sum_probs=96.0
Q ss_pred cCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHH
Q 007977 117 ESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCI 194 (582)
Q Consensus 117 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (582)
+.|.+...+++.|++++. .+.+|||+|.+ ++|+|||.|||++|+||++
T Consensus 12 ~~~~~~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~~~~Hk~vLaa~S~~F~~------------------------- 61 (129)
T 3ga1_A 12 EIPNFGNSILECLNEQRL-----QGLYCDVSVVVKGHAFKAHRAVLAASSSYFRD------------------------- 61 (129)
T ss_dssp ECTTHHHHHHHHHHHHHH-----TTCSCCEEEEETTEEEEECHHHHHHHBHHHHH-------------------------
T ss_pred ecCcHHHHHHHHHHHHHh-----cCCCcceEEEECCEEEEehHHHHHHcCHHHHH-------------------------
Confidence 467788889999999988 56789999999 4899999999999999999
Q ss_pred HHHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 195 FLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 195 ~~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
||.++ ....|.|+ +++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||.+
T Consensus 62 ---~f~~~----~~~~i~l~-~~~~~~~f~~ll~~iYtg~~~i~~-~~~~~ll~~A~~~~i~~l~~~C~~~L~~ 126 (129)
T 3ga1_A 62 ---LFNNS----RSAVVELP-AAVQPQSFQQILSFCYTGRLSMNV-GDQDLLMYTAGFLQIQEIMEKGTEFFLK 126 (129)
T ss_dssp ---HHHHC----CCSEEECC-TTCCHHHHHHHHHHHHHSEEECCT-TTHHHHHHHHHHTTBTTSSCC-------
T ss_pred ---HHcCC----CCCEEEEC-CCCCHHHHHHHHHHHhCCccccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99986 45677774 279999999999999999999999 9999999999999999999999999986
No 18
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.78 E-value=2.3e-20 Score=166.65 Aligned_cols=109 Identities=26% Similarity=0.337 Sum_probs=98.4
Q ss_pred CchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHH
Q 007977 118 SPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIF 195 (582)
Q Consensus 118 ~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (582)
.|.|...+++.|++++. .+.+|||++.+ ++|+|||.|||++|+||++
T Consensus 7 ~~~h~~~l~~~l~~l~~-----~~~~~Dv~l~v~~~~~~aHk~vLaa~S~yF~~-------------------------- 55 (119)
T 2q81_A 7 FPQHSQHVLEQLNQQRQ-----LGLLCDCTFVVDGVHFKAHKAVLAACSEYFKM-------------------------- 55 (119)
T ss_dssp HHHHHHHHHHHHHHHHH-----HTCSCCEEEEETTEEEEECHHHHHHHCHHHHH--------------------------
T ss_pred cchHHHHHHHHHHHHHh-----cCCCcceEEEECCEEEehhHHHHHHcCHHHHH--------------------------
Confidence 46788889999999987 56799999999 4899999999999999999
Q ss_pred HHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcc
Q 007977 196 LQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 267 (582)
Q Consensus 196 ~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~ 267 (582)
||+++ +..|.++ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++||.
T Consensus 56 --~f~~~-----~~~i~l~--~~~~~~f~~ll~~~Ytg~~~i~~-~~~~~ll~~A~~l~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 56 --LFVDQ-----KDVVHLD--ISNAAGLGQVLEFMYTAKLSLSP-ENVDDVLAVATFLQMQDIITACHALKS 117 (119)
T ss_dssp --HHHHC-----CSGGGGG--GCCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred --HHcCC-----CCEEEeC--CCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 99873 3456665 89999999999999999999999 899999999999999999999999985
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.77 E-value=3.2e-19 Score=159.77 Aligned_cols=107 Identities=19% Similarity=0.172 Sum_probs=91.2
Q ss_pred eecCchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHH
Q 007977 115 VEESPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVIL 192 (582)
Q Consensus 115 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (582)
...+|.+...+++.|+.. .+.+|||+|.+ +.|+|||+|||++|+||++
T Consensus 9 ~~~~~~~~~~~l~~l~r~-------~~~~~Dv~l~v~~~~f~aHk~vLaa~S~yF~~----------------------- 58 (119)
T 3m5b_A 9 RLPSPYGSDRLVQLAARL-------RPALCDTLITVGSQEFPAHSLVLAGVSQQLGR----------------------- 58 (119)
T ss_dssp EECCTTTTCHHHHHHHHH-------TTTTCCEEEEETTEEEEECHHHHHTTCGGGCC-----------------------
T ss_pred CCCCCcchHHHHHHHHHh-------cCCCcceEEEECCEEEeeEHHHHHHcCHHHhc-----------------------
Confidence 334566777788888743 34689999999 4899999999999999987
Q ss_pred HHHHHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 193 CIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 193 ~~~~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
. +..|.|+ ++++++|+.+|+|||||++.++. +++.+++.+|++|+++.|++.|++++++
T Consensus 59 -----~---------~~~i~l~--~v~~~~f~~ll~fiYtg~~~i~~-~~v~~ll~aA~~l~i~~l~~~C~~~~~~ 117 (119)
T 3m5b_A 59 -----R---------GQWALGE--GISPSTFAQLLNFVYGESVELQP-GELRPLQEAARALGVQSLEEACWRARGD 117 (119)
T ss_dssp -----C---------EEEECCS--SCCHHHHHHHHHHHTTCCEEECG-GGHHHHHHHHHHTTCHHHHHHHHHHC--
T ss_pred -----C---------CCEEEeC--CCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence 1 2457776 99999999999999999999999 9999999999999999999999999875
No 20
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.72 E-value=4.9e-18 Score=151.09 Aligned_cols=102 Identities=23% Similarity=0.306 Sum_probs=92.3
Q ss_pred CchhHHHhHHHHHHHhcCCCCCCCCceeEEEEE--EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHH
Q 007977 118 SPADVGLNLKQCEEATGNIDPAWSMDLSTVLRV--KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIF 195 (582)
Q Consensus 118 ~~~~~~~~l~~l~~~~~~~~~~~~~~~DV~l~v--~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (582)
.|.+....++.|++++. .+.+|||++.+ +.|+|||.|||++|+||++
T Consensus 11 ~~~~~~~l~~~l~~~~~-----~~~~~Dv~l~v~~~~f~aHk~vLaa~S~~F~~-------------------------- 59 (116)
T 3fkc_A 11 DIQYSGSLLNSLNEQRG-----HGLFCDVTVIVEDRKFRAHKNILSASSTYFHQ-------------------------- 59 (116)
T ss_dssp CTTHHHHHHHHHHHHHH-----HTTTCCEEEEETTEEEEECHHHHHHHCHHHHH--------------------------
T ss_pred CccHHHHHHHHHHHHHh-----cCCceeEEEEECCEEEehhHHHHHHcCHHHHH--------------------------
Confidence 56788889999999887 56799999999 4899999999999999999
Q ss_pred HHhhccCcccCCccEEEEecCCCCHHHHHHHHhcccCCcc-ccCccchHHHHHHhhchhhhhhhhh
Q 007977 196 LQLFSNGMRESEQRYVTLRIHASEEAALMELLNFMYSSTL-STTTPTALLDVLMAADKFEVASCMR 260 (582)
Q Consensus 196 ~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fiYTg~l-~i~~~~~v~~ll~aAd~l~v~~L~~ 260 (582)
||.++ +..|.++ ++++++|+.+|+|+|||++ .++. +++.+++.+|++|+++.|++
T Consensus 60 --~f~~~-----~~~i~l~--~~~~~~f~~~l~~~Ytg~~~~~~~-~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 60 --LFSVA-----GQVVELS--FIRAEIFAEILNYIYSSKIVRVRS-DLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp --HTTSC-----CSEEEEC--SSCHHHHHHHHHHHTTSCCCSCCH-HHHHHHHHHHHHHTCHHHHT
T ss_pred --HHcCC-----CCEEEeC--CCCHHHHHHHHHhhcCCCcCCCCH-HHHHHHHHHHHHhCccccCc
Confidence 99875 4678887 9999999999999999999 6888 99999999999999999875
No 21
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.70 E-value=6.1e-18 Score=148.23 Aligned_cols=96 Identities=16% Similarity=0.202 Sum_probs=91.2
Q ss_pred cccCcCCccchhhhccccchhhhhhhhhhHHHHHHHHHHHhhhhhhhhhHhhcCCCHHHHHHHhcCCCccccchhhHHHH
Q 007977 266 LRNLPMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDF 345 (582)
Q Consensus 266 L~~l~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~f~~v~~~~~~f~~L~~~~l~~lL~sd~L~V~sE~~Vf~a 345 (582)
+.+ +++++||+.++.+|+.| +|..|.++|.+||.+||.++++ +++|++||.+.+..+|++| |.+|.+||+|
T Consensus 4 ~~~-~L~~~NCl~i~~~A~~~----~~~~L~~~a~~fi~~nF~~v~~-~~eFl~L~~~~L~~lL~sd---v~~E~~vf~a 74 (105)
T 2eqx_A 4 GSS-GVQVGNCLQVMWLADRH----SDPELYTAAKHCAKTHLAQLQN-TEEFLHLPHRLLTDIISDG---VPCSQNPTEA 74 (105)
T ss_dssp CCC-CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHTCHHHHT-SHHHHHSCHHHHHHHHHTC---EETTSCHHHH
T ss_pred hhc-cCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHHHHHHHHh-cccHhhCCHHHHHHHHcCC---CCCHHHHHHH
Confidence 456 79999999999999998 7999999999999999999999 9999999999999999997 8899999999
Q ss_pred HHHHHhhcCCChhhHHhhhcccccccccC
Q 007977 346 ALKWARTHYPKLEERREILGSRLGRLIRF 374 (582)
Q Consensus 346 Vl~Wi~~d~~~~~~R~~~l~~~LL~~VRf 374 (582)
|++|++|| +++|.+++ ++||++||+
T Consensus 75 v~~Wv~~d---~~~R~~~~-~~Ll~~VR~ 99 (105)
T 2eqx_A 75 IEAWINFN---KEEREAFA-ESLRTSLKE 99 (105)
T ss_dssp HHHHHHTT---HHHHHHHH-HHHHHHCCE
T ss_pred HHHHHHcC---HHHHHHHH-HHHHHHHHH
Confidence 99999999 88899999 999999995
No 22
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.23 E-value=3.1e-11 Score=121.96 Aligned_cols=116 Identities=16% Similarity=0.128 Sum_probs=93.0
Q ss_pred eeEEEeec-----CceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEcccc--------cccCccCC----
Q 007977 431 ERAYKYRP-----VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG--------FFLSAHCN---- 490 (582)
Q Consensus 431 ~~l~v~~~-----~~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~g--------~~~dp~~n---- 490 (582)
+.+|++|+ .+.+++|||.+++|.. ||.+|..+++++++++|| ++||.. ..|||.++
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVF----AVGGFNGSLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEECCEEE----EEeCcCCCccccceEEECCCCCceee
Confidence 56888765 4689999999999998 788999999999995554 999961 23577765
Q ss_pred ---ccCCCCceEEEEEccc-------cCCCCccccccccceeeccC---CCeeecCCCCceeecceeEeccccccccccc
Q 007977 491 ---MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPWT 557 (582)
Q Consensus 491 ---M~~~R~~~~~~vl~G~-------~~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~~~~~~ 557 (582)
|+.+|..|++++++|+ ++...++++ |+||| +|+.+++||.++..++.++++
T Consensus 92 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~------~~~d~~~~~W~~~~~~p~~r~~~~~~~~~---------- 155 (302)
T 2xn4_A 92 VANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSV------EAYNIKSNEWFHVAPMNTRRSSVGVGVVG---------- 155 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEE------EEEETTTTEEEEECCCSSCCBSCEEEEET----------
T ss_pred CCCCCccccceEEEEECCEEEEEcCCCCCccCceE------EEEeCCCCeEeecCCCCCcccCceEEEEC----------
Confidence 9999999999987766 333345554 99999 999999999999888766655
Q ss_pred ceecCCceEEEcCe
Q 007977 558 AFMADDSIYFINGN 571 (582)
Q Consensus 558 ~~~~~~~~~~i~~~ 571 (582)
+++|++||.
T Consensus 156 -----~~iyv~GG~ 164 (302)
T 2xn4_A 156 -----GLLYAVGGY 164 (302)
T ss_dssp -----TEEEEECCE
T ss_pred -----CEEEEEeCC
Confidence 678888886
No 23
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.21 E-value=5e-11 Score=120.67 Aligned_cols=121 Identities=14% Similarity=0.057 Sum_probs=94.3
Q ss_pred ccc-ceeEEEeec---CceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEcccc-------cccCccCC--
Q 007977 427 RRF-VERAYKYRP---VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG-------FFLSAHCN-- 490 (582)
Q Consensus 427 R~~-~~~l~v~~~---~~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~g-------~~~dp~~n-- 490 (582)
|+. .+.+|++|+ .+.++.|||.+++|.. ||.+|.+|++++++++|| ++||.. ..|||.++
T Consensus 7 r~~~~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~d~~~~~W 82 (306)
T 3ii7_A 7 RRKKHDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVY----ILGGSQLFPIKRMDCYNVVKDSW 82 (306)
T ss_dssp ---CCCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEE----EECCBSSSBCCEEEEEETTTTEE
T ss_pred CccccceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEE----EEeCCCCCCcceEEEEeCCCCeE
Confidence 543 367888765 5789999999999998 788999999999996554 999962 23577776
Q ss_pred -----ccCCCCceEEEEEccc-------c-CCCCccccccccceeeccC---CCeeecCCCCceeecceeEecccccccc
Q 007977 491 -----MDQQSSFHCFGLFLGM-------Q-EKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGI 554 (582)
Q Consensus 491 -----M~~~R~~~~~~vl~G~-------~-~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~~~ 554 (582)
|+.+|..|++++++|+ + +...++.+ ++||| +|+.+++||.++..++.++++
T Consensus 83 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~------~~~d~~~~~W~~~~~~p~~r~~~~~~~~~------- 149 (306)
T 3ii7_A 83 YSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLF------ECYDTRTESWHTKPSMLTQRCSHGMVEAN------- 149 (306)
T ss_dssp EEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCE------EEEETTTTEEEEECCCSSCCBSCEEEEET-------
T ss_pred EECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeE------EEEeCCCCceEeCCCCcCCcceeEEEEEC-------
Confidence 9999999999987766 2 22234454 99999 899999999999888766655
Q ss_pred cccceecCCceEEEcCee
Q 007977 555 PWTAFMADDSIYFINGNL 572 (582)
Q Consensus 555 ~~~~~~~~~~~~~i~~~~ 572 (582)
+++|++||..
T Consensus 150 --------~~iyv~GG~~ 159 (306)
T 3ii7_A 150 --------GLIYVCGGSL 159 (306)
T ss_dssp --------TEEEEECCEE
T ss_pred --------CEEEEECCCC
Confidence 6789999863
No 24
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.18 E-value=5.2e-12 Score=118.51 Aligned_cols=107 Identities=17% Similarity=0.285 Sum_probs=85.3
Q ss_pred EEEEE---EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHHHhhcc-Ccc-cCCccEEEEecCCCCH
Q 007977 146 TVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN-GMR-ESEQRYVTLRIHASEE 220 (582)
Q Consensus 146 V~l~v---~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~-~~~-Es~~~~v~l~~~~v~~ 220 (582)
|+|.. +.|.+||.+ |++|+||++ ||.+ ++. |+.+..|.|+ ++++
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~~i~~----------------------------m~~~~~~~~e~~~~~Ipl~--~V~~ 51 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSVTIKT----------------------------MLEDLGMDDEGDDDPVPLP--NVNA 51 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCHHHHH----------------------------HTTSSCSS------CEECT--TSCH
T ss_pred EEEEcCCCCEEEeCHHH-HHHhHHHHH----------------------------HHHhcCCcccccCCCcCCC--CccH
Confidence 56654 479999999 899999999 9998 777 7777788888 9999
Q ss_pred HHHHHHHhcccCCc--------------------------cccCccchHHHHHHhhchhhhhhhhhhhhhhcccC--cCC
Q 007977 221 AALMELLNFMYSST--------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNL--PMT 272 (582)
Q Consensus 221 ~~f~~lL~fiYTg~--------------------------l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~l--~l~ 272 (582)
.+++.+++|+|++. +.++. +++.+|+.||++|++..|.++|++++..+ +.+
T Consensus 52 ~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~-~~l~eLl~AAnyL~I~~Lld~~c~~va~~i~gkt 130 (159)
T 2ast_A 52 AILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVANMIKGKT 130 (159)
T ss_dssp HHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999988 77777 89999999999999999999999999662 334
Q ss_pred ccchhhhccccc
Q 007977 273 CESALLYLDLPS 284 (582)
Q Consensus 273 ~~n~~~~l~la~ 284 (582)
++.+-.++.+..
T Consensus 131 ~eeir~~f~I~~ 142 (159)
T 2ast_A 131 PEEIRKTFNIKN 142 (159)
T ss_dssp HHHHHHHTTCCC
T ss_pred HHHHHHHcCCCC
Confidence 444444444443
No 25
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.17 E-value=6.8e-11 Score=120.54 Aligned_cols=118 Identities=14% Similarity=0.018 Sum_probs=94.0
Q ss_pred eeEEEeec---------CceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEccc--c-------cccCccC
Q 007977 431 ERAYKYRP---------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ--G-------FFLSAHC 489 (582)
Q Consensus 431 ~~l~v~~~---------~~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~--g-------~~~dp~~ 489 (582)
+.+|++|+ .+.+++|||.+++|.. ||.+|..|++++++++|| ++||. + ..|||.+
T Consensus 99 ~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 99 NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVY----VIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBCTTSCBCCCEEEEETTT
T ss_pred CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEE----EEeCCCCCCcccceEEEEeCCC
Confidence 45677655 3579999999999998 788999999999996655 99997 1 2357776
Q ss_pred C-------ccCCCCceEEEEEccc-------cCCCCccccccccceeeccC---CCeeecCCCCceeecceeEecccccc
Q 007977 490 N-------MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLF 552 (582)
Q Consensus 490 n-------M~~~R~~~~~~vl~G~-------~~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~ 552 (582)
+ |+.+|..|++++++|+ ++.+.++.+ ++||| +|+.+++||.++..++.++++
T Consensus 175 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~----- 243 (315)
T 4asc_A 175 FEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSA------EVYSITDNKWAPFEAFPQERSSLSLVSLV----- 243 (315)
T ss_dssp TEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEE------EEEETTTTEEEEECCCSSCCBSCEEEEET-----
T ss_pred CeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceE------EEEECCCCeEEECCCCCCcccceeEEEEC-----
Confidence 5 9999999999987776 333344554 99999 899999999999988776665
Q ss_pred cccccceecCCceEEEcCeee
Q 007977 553 GIPWTAFMADDSIYFINGNLH 573 (582)
Q Consensus 553 ~~~~~~~~~~~~~~~i~~~~~ 573 (582)
+++|++||.-.
T Consensus 244 ----------~~l~v~GG~~~ 254 (315)
T 4asc_A 244 ----------GTLYAIGGFAT 254 (315)
T ss_dssp ----------TEEEEEEEEEE
T ss_pred ----------CEEEEECCccc
Confidence 68999999743
No 26
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.14 E-value=1.9e-10 Score=116.35 Aligned_cols=117 Identities=17% Similarity=0.118 Sum_probs=92.2
Q ss_pred eeEEEeec-----CceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEcccc---------cccCccCC---
Q 007977 431 ERAYKYRP-----VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG---------FFLSAHCN--- 490 (582)
Q Consensus 431 ~~l~v~~~-----~~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~g---------~~~dp~~n--- 490 (582)
+.+|++|+ .+.++.|||.+++|.. ||.+|..|++++++|+|| ++||.. +.|||.++
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIY----TSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEE----EECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEE----EECCCCCCCcEeeeEEEEeCCCCceE
Confidence 45677664 4689999999999998 888999999999996555 999972 23477765
Q ss_pred ----ccCCCCceEEEEEccc-------cCCCC----ccccccccceeeccC---CCeeecCCCCceeecceeEecccccc
Q 007977 491 ----MDQQSSFHCFGLFLGM-------QEKGS----VSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLF 552 (582)
Q Consensus 491 ----M~~~R~~~~~~vl~G~-------~~~~~----lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~ 552 (582)
|+.+|..|++++++|+ ++.+. ++.+ ++||| +|+.+++|+.++..++.++++
T Consensus 132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~----- 200 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSC------EVYDPATETWTELCPMIEARKNHGLVFVK----- 200 (306)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCE------EEEETTTTEEEEECCCSSCCBSCEEEEET-----
T ss_pred eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceE------EEeCCCCCeEEECCCccchhhcceEEEEC-----
Confidence 9999999999987776 22222 4554 99999 899999999999887766665
Q ss_pred cccccceecCCceEEEcCee
Q 007977 553 GIPWTAFMADDSIYFINGNL 572 (582)
Q Consensus 553 ~~~~~~~~~~~~~~~i~~~~ 572 (582)
+++|++||.-
T Consensus 201 ----------~~i~v~GG~~ 210 (306)
T 3ii7_A 201 ----------DKIFAVGGQN 210 (306)
T ss_dssp ----------TEEEEECCEE
T ss_pred ----------CEEEEEeCCC
Confidence 6788888863
No 27
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.14 E-value=1.8e-10 Score=116.15 Aligned_cols=121 Identities=20% Similarity=0.169 Sum_probs=89.8
Q ss_pred ccccc-eeEEEeec-------CceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEcccc--------cccC
Q 007977 426 YRRFV-ERAYKYRP-------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG--------FFLS 486 (582)
Q Consensus 426 pR~~~-~~l~v~~~-------~~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~g--------~~~d 486 (582)
||... +.+|++|+ .+.+++|||.+++|.. +|.+|.++++++.+++|| ++||.. +.||
T Consensus 9 pr~~~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~----v~GG~~~~~~~~~~~~~d 84 (301)
T 2vpj_A 9 ARLGANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIY----VIGGYDGRSRLSSVECLD 84 (301)
T ss_dssp ----CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBCSSCBCCCEEEEE
T ss_pred ccccCCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEE----EEcCCCCCccCceEEEEE
Confidence 36533 56787666 4588999999999998 778899999999995554 999961 1235
Q ss_pred ccCC----------ccCCCCceEEEEEccc-------cCCCCccccccccceeeccC---CCeeecCCCCceeecceeEe
Q 007977 487 AHCN----------MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAV 546 (582)
Q Consensus 487 p~~n----------M~~~R~~~~~~vl~G~-------~~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~av 546 (582)
|.++ |+.+|..|++++++|+ ++...++.+ ++||| +|+.+++||.++..++.+++
T Consensus 85 ~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~------~~~d~~~~~W~~~~~~p~~r~~~~~~~~ 158 (301)
T 2vpj_A 85 YTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSM------ERYDPNIDQWSMLGDMQTAREGAGLVVA 158 (301)
T ss_dssp TTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEE------EEEETTTTEEEEEEECSSCCBSCEEEEE
T ss_pred CCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceE------EEEcCCCCeEEECCCCCCCcccceEEEE
Confidence 5432 8999999999987766 333335554 99999 89999999999887776655
Q ss_pred cccccccccccceecCCceEEEcCe
Q 007977 547 GYRNLFGIPWTAFMADDSIYFINGN 571 (582)
Q Consensus 547 g~~~~~~~~~~~~~~~~~~~~i~~~ 571 (582)
+ +++|++||.
T Consensus 159 ~---------------~~iyv~GG~ 168 (301)
T 2vpj_A 159 S---------------GVIYCLGGY 168 (301)
T ss_dssp T---------------TEEEEECCB
T ss_pred C---------------CEEEEECCC
Confidence 4 577888774
No 28
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.13 E-value=1.9e-10 Score=117.03 Aligned_cols=116 Identities=14% Similarity=0.106 Sum_probs=91.3
Q ss_pred eeEEEeecC----------ceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEccc-c-------cccCccC
Q 007977 431 ERAYKYRPV----------KVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ-G-------FFLSAHC 489 (582)
Q Consensus 431 ~~l~v~~~~----------~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~-g-------~~~dp~~ 489 (582)
+.+|++|+. +.+++|||.+++|.. |+.+|..+++++++|+|| ++||. + +.|||.+
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIY----AVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEE----EECCEETTEECCCEEEEETTT
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEE----EEcCCCCCcccccEEEECCCC
Confidence 457776554 578999999999998 788999999999996555 99996 1 2457776
Q ss_pred C-------ccCCCCceEEEEEccc-------cCCCCccccccccceeeccC---CCeeecCCCCceeecceeEecccccc
Q 007977 490 N-------MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLF 552 (582)
Q Consensus 490 n-------M~~~R~~~~~~vl~G~-------~~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~ 552 (582)
+ |+.+|..|++++++|+ ++...++.+ ++||| +|+.+++||.++..++.++++
T Consensus 147 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~----- 215 (308)
T 1zgk_A 147 DEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSA------ECYYPERNEWRMITAMNTIRSGAGVCVLH----- 215 (308)
T ss_dssp TEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCE------EEEETTTTEEEECCCCSSCCBSCEEEEET-----
T ss_pred CeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceE------EEEeCCCCeEeeCCCCCCccccceEEEEC-----
Confidence 5 8999999999987666 333335554 99999 999999999999887766554
Q ss_pred cccccceecCCceEEEcCe
Q 007977 553 GIPWTAFMADDSIYFINGN 571 (582)
Q Consensus 553 ~~~~~~~~~~~~~~~i~~~ 571 (582)
++||++||.
T Consensus 216 ----------~~iyv~GG~ 224 (308)
T 1zgk_A 216 ----------NCIYAAGGY 224 (308)
T ss_dssp ----------TEEEEECCB
T ss_pred ----------CEEEEEeCC
Confidence 678888875
No 29
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.13 E-value=1.2e-10 Score=118.92 Aligned_cols=118 Identities=19% Similarity=0.203 Sum_probs=92.5
Q ss_pred eeEEEeec--------CceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEcccc---------cccCccCC
Q 007977 431 ERAYKYRP--------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG---------FFLSAHCN 490 (582)
Q Consensus 431 ~~l~v~~~--------~~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~g---------~~~dp~~n 490 (582)
+.+|++|+ .+.+++|||.+++|.. ||.+|.+|++++.+|+|| ++||.. +.|||.++
T Consensus 110 ~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 110 DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIY----CLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEE----EECCEESSSCBCCCEEEEETTTT
T ss_pred CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEE----EEcCCCCCCCccceEEEEcCCCC
Confidence 35677554 2578999999999997 788999999999996655 999961 23577776
Q ss_pred -------ccCCCCceEEEEEccc-------cCCCCccccccccceeeccC---CCeeecCCCCceeecceeEeccccccc
Q 007977 491 -------MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFG 553 (582)
Q Consensus 491 -------M~~~R~~~~~~vl~G~-------~~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~~ 553 (582)
|+.+|..|++++++|+ ++.+.++.+ |+||| +|+.+++||.++..++.++++
T Consensus 186 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~------ 253 (318)
T 2woz_A 186 DWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASV------EAFDLKTNKWEVMTEFPQERSSISLVSLA------ 253 (318)
T ss_dssp EEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEE------EEEETTTCCEEECCCCSSCCBSCEEEEET------
T ss_pred EEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceE------EEEECCCCeEEECCCCCCcccceEEEEEC------
Confidence 9999999999987776 333334454 99999 899999999998877766555
Q ss_pred ccccceecCCceEEEcCeee
Q 007977 554 IPWTAFMADDSIYFINGNLH 573 (582)
Q Consensus 554 ~~~~~~~~~~~~~~i~~~~~ 573 (582)
+++|++||...
T Consensus 254 ---------~~i~v~GG~~~ 264 (318)
T 2woz_A 254 ---------GSLYAIGGFAM 264 (318)
T ss_dssp ---------TEEEEECCBCC
T ss_pred ---------CEEEEECCeec
Confidence 68899998644
No 30
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.12 E-value=2.4e-10 Score=116.25 Aligned_cols=117 Identities=16% Similarity=0.104 Sum_probs=92.2
Q ss_pred eeEEEeec------CceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEcccc--------cccCccCC---
Q 007977 431 ERAYKYRP------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG--------FFLSAHCN--- 490 (582)
Q Consensus 431 ~~l~v~~~------~~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~g--------~~~dp~~n--- 490 (582)
+.+|++|+ .+.++.|||.+++|.. +|.+|..+++++++++|| ++||.. ..|||.++
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLY----AVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEE----EECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEE----EEeCCCCCCcCceEEEEeCCCCeEe
Confidence 45777654 5689999999999998 788899999999996555 999971 23477765
Q ss_pred ----ccCCCCceEEEEEccc-------cCCCCccccccccceeeccC---CCeeecCCCCceeecceeEecccccccccc
Q 007977 491 ----MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPW 556 (582)
Q Consensus 491 ----M~~~R~~~~~~vl~G~-------~~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~~~~~ 556 (582)
|+.+|..|++++++|+ ++...+..+ ++||| +|+.+++||.++..++.++++
T Consensus 198 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--------- 262 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSV------ERYDVETETWTFVAPMKHRRSALGITVHQ--------- 262 (308)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCE------EEEETTTTEEEECCCCSSCCBSCEEEEET---------
T ss_pred eCCCCCCccccceEEEECCEEEEEeCCCCCCccceE------EEEeCCCCcEEECCCCCCCccceEEEEEC---------
Confidence 9999999999887666 333334554 99999 899999999999877766655
Q ss_pred cceecCCceEEEcCee
Q 007977 557 TAFMADDSIYFINGNL 572 (582)
Q Consensus 557 ~~~~~~~~~~~i~~~~ 572 (582)
+++|++||.-
T Consensus 263 ------~~i~v~GG~~ 272 (308)
T 1zgk_A 263 ------GRIYVLGGYD 272 (308)
T ss_dssp ------TEEEEECCBC
T ss_pred ------CEEEEEcCcC
Confidence 6889998853
No 31
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.11 E-value=2.6e-10 Score=115.17 Aligned_cols=116 Identities=16% Similarity=0.205 Sum_probs=90.4
Q ss_pred eeEEEeec------CceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEcccc--------cccCccCC---
Q 007977 431 ERAYKYRP------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG--------FFLSAHCN--- 490 (582)
Q Consensus 431 ~~l~v~~~------~~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~g--------~~~dp~~n--- 490 (582)
+.+|++|+ .+.+++|||.+++|.. ||.+|..|++++++|+|| ++||.. +.|||.++
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLY----AVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE----EEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEE----EEcCCCCCccCceEEEEeCCCCeEe
Confidence 45777654 4579999999999998 788999999999996555 999961 24577776
Q ss_pred ----ccCCCCceEEEEEccc-------cCCC--CccccccccceeeccC---CCeeecCCCCceeecceeEecccccccc
Q 007977 491 ----MDQQSSFHCFGLFLGM-------QEKG--SVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGI 554 (582)
Q Consensus 491 ----M~~~R~~~~~~vl~G~-------~~~~--~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~~~ 554 (582)
|+.+|..|++++++|+ ++.. .++.+ ++||| +|+.+++||.++..++.++++
T Consensus 138 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~------- 204 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTV------ECYNATTNEWTYIAEMSTRRSGAGVGVLN------- 204 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCE------EEEETTTTEEEEECCCSSCCBSCEEEEET-------
T ss_pred ecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEE------EEEeCCCCcEEECCCCccccccccEEEEC-------
Confidence 9999999999987776 2222 14454 99999 899999999998877766554
Q ss_pred cccceecCCceEEEcCe
Q 007977 555 PWTAFMADDSIYFINGN 571 (582)
Q Consensus 555 ~~~~~~~~~~~~~i~~~ 571 (582)
+++|++||.
T Consensus 205 --------~~iyv~GG~ 213 (302)
T 2xn4_A 205 --------NLLYAVGGH 213 (302)
T ss_dssp --------TEEEEECCB
T ss_pred --------CEEEEECCC
Confidence 677888774
No 32
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.11 E-value=1.9e-10 Score=117.25 Aligned_cols=106 Identities=10% Similarity=-0.004 Sum_probs=84.2
Q ss_pred eEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEcccc-----------cccCccCC-------ccCCCCceE
Q 007977 441 VVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQG-----------FFLSAHCN-------MDQQSSFHC 499 (582)
Q Consensus 441 ~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~g-----------~~~dp~~n-------M~~~R~~~~ 499 (582)
.++.|||.+++|.. ||.+|.+|++++++++|| ++||.. +.|||.++ |+.+|..|+
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 143 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIY----VVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHT 143 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESCEEEEETTEEE----EECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCE
T ss_pred ceEEecCCCCeEEECCCCCcchhceeEEEECCEEE----EEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccccee
Confidence 48899999999998 888999999999996555 999951 23477765 999999999
Q ss_pred EEEEccc--------cCCCCccccccccceeeccC---CCeeecCCCCceeecceeEecccccccccccceecCCceEEE
Q 007977 500 FGLFLGM--------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFI 568 (582)
Q Consensus 500 ~~vl~G~--------~~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~~~~~~~~~~~~~~~~i 568 (582)
+++++|+ .+...++.+ ++||| +|+.+++||.++..+++++++ +++|++
T Consensus 144 ~~~~~~~iyv~GG~~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~---------------~~iyv~ 202 (315)
T 4asc_A 144 VLSHMDLVYVIGGKGSDRKCLNKM------CVYDPKKFEWKELAPMQTARSLFGATVHD---------------GRIIVA 202 (315)
T ss_dssp EEEETTEEEEECCBCTTSCBCCCE------EEEETTTTEEEECCCCSSCCBSCEEEEET---------------TEEEEE
T ss_pred EEEECCEEEEEeCCCCCCcccceE------EEEeCCCCeEEECCCCCCchhceEEEEEC---------------CEEEEE
Confidence 9987666 122234454 99999 899999999999888876665 677888
Q ss_pred cCe
Q 007977 569 NGN 571 (582)
Q Consensus 569 ~~~ 571 (582)
||.
T Consensus 203 GG~ 205 (315)
T 4asc_A 203 AGV 205 (315)
T ss_dssp EEE
T ss_pred ecc
Confidence 875
No 33
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.10 E-value=3.8e-10 Score=113.75 Aligned_cols=116 Identities=19% Similarity=0.204 Sum_probs=91.4
Q ss_pred eeEEEeec------CceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEccc-c-------cccCccCC---
Q 007977 431 ERAYKYRP------VKVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ-G-------FFLSAHCN--- 490 (582)
Q Consensus 431 ~~l~v~~~------~~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~-g-------~~~dp~~n--- 490 (582)
+.+|++|+ .+.++.|||.+++|.. +|.+|..+++++.+|+|| ++||. + ..|||.++
T Consensus 113 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iy----v~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 113 DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIY----CLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEE----EECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEE----EECCCCCCcccceEEEEeCCCCcEE
Confidence 45777654 5689999999999997 888999999999996655 99997 1 23477765
Q ss_pred ----ccCCCCceEEEEEccc-------cCCCCccccccccceeeccC---CCeeecCCCCceeecceeEecccccccccc
Q 007977 491 ----MDQQSSFHCFGLFLGM-------QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPW 556 (582)
Q Consensus 491 ----M~~~R~~~~~~vl~G~-------~~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~~~~~ 556 (582)
|+.+|..|++++++|+ ++...+..+ ++||| +|+.+++||.++..++.++++
T Consensus 189 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~--------- 253 (301)
T 2vpj_A 189 NVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSV------EAYNIRTDSWTTVTSMTTPRCYVGATVLR--------- 253 (301)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCE------EEEETTTTEEEEECCCSSCCBSCEEEEET---------
T ss_pred eCCCCCcccccceEEEECCEEEEEeCCCCCcccceE------EEEeCCCCcEEECCCCCCcccceeEEEEC---------
Confidence 9999999999987766 333334554 99999 899999999999877766655
Q ss_pred cceecCCceEEEcCe
Q 007977 557 TAFMADDSIYFINGN 571 (582)
Q Consensus 557 ~~~~~~~~~~~i~~~ 571 (582)
+++|++||.
T Consensus 254 ------~~i~v~GG~ 262 (301)
T 2vpj_A 254 ------GRLYAIAGY 262 (301)
T ss_dssp ------TEEEEECCB
T ss_pred ------CEEEEEcCc
Confidence 678888885
No 34
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.10 E-value=4.2e-11 Score=136.67 Aligned_cols=185 Identities=10% Similarity=0.015 Sum_probs=126.2
Q ss_pred HHhhcCCChhhHHhhhcccccccccCCCCCHHHHhhhcccCCCC--ch---HHHHHHH------HHHhhhccchhhhhhh
Q 007977 349 WARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDFD--PE---LASKVVL------ESLFFKAETPYRQRAL 417 (582)
Q Consensus 349 Wi~~d~~~~~~R~~~l~~~LL~~VRfplls~~~L~~~v~~~~l~--~~---~~~~ll~------eA~~~h~~~p~~q~~l 417 (582)
|+.++ ...|...+ +.|++.+||++|.+.|+......++.. .+ .|..+.. ++..++
T Consensus 315 ~~~~~---e~~R~~~l-E~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 380 (695)
T 2zwa_A 315 SADEA---TKKELLKV-EPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEINLTVDEDYQLL---------- 380 (695)
T ss_dssp HSCHH---HHHHHHHH-SCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----CCCEECSSEEEE----------
T ss_pred hCCHH---HHHHHHhc-cccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccccCCCCCceeEe----------
Confidence 99887 66788888 899999999999999988877665543 22 2221110 000000
Q ss_pred ccccccccccccc------eeEEEeec-----CceEEeeeCccCeEEEc---------cccccceeEEee--CCeeecee
Q 007977 418 AAEEANSTYRRFV------ERAYKYRP-----VKVVEFELPRQQCVVYL---------DLKREECAHLFP--AGRIYSQA 475 (582)
Q Consensus 418 ~s~~t~~~pR~~~------~~l~v~~~-----~~~ve~ydP~~~~W~~L---------~~~R~~~~vavl--~g~IYn~i 475 (582)
..+.. .+|++. +.+|++|+ .+.+.+|||.+++|..+ |.+|.+|+++++ +|+||
T Consensus 381 ~~~~~--p~rr~g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~ly--- 455 (695)
T 2zwa_A 381 ECECP--INRKFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLL--- 455 (695)
T ss_dssp ECCCT--TCCBSCEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEE---
T ss_pred ccCCC--CCCceeEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEE---
Confidence 01111 123332 35777765 45799999999999863 467999999999 86555
Q ss_pred EEEcccc---------cccCccCC-------ccCCCCceEEEEE-ccc----cCCCCccccccccceeeccC---CCeee
Q 007977 476 FHLGGQG---------FFLSAHCN-------MDQQSSFHCFGLF-LGM----QEKGSVSFAVDYEFAARIKP---TEEYV 531 (582)
Q Consensus 476 YviGG~g---------~~~dp~~n-------M~~~R~~~~~~vl-~G~----~~~~~lssvV~~~~aErYdP---~W~~v 531 (582)
++||.. +.||+.++ |+.+|..|+++++ +|+ .|...-.. | ++||| +|+.+
T Consensus 456 -v~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~-v-----~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 456 -LIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPA-M-----LLYNVTEEIFKDV 528 (695)
T ss_dssp -EECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCS-E-----EEEETTTTEEEEC
T ss_pred -EEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCC-E-----EEEECCCCceEEc
Confidence 999971 13477765 9999999999986 666 22111114 3 99999 89999
Q ss_pred cC---CCCceeecceeEecccccccccccceecCCceEEEcCe
Q 007977 532 SK---YKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYFINGN 571 (582)
Q Consensus 532 a~---m~~~~~~~g~~avg~~~~~~~~~~~~~~~~~~~~i~~~ 571 (582)
++ ||.++..+++++++. .++++|++||.
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~------------~~~~iyv~GG~ 559 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDP------------VSKQGIILGGG 559 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEET------------TTTEEEEECCB
T ss_pred cCCCCCCCcccceeEEEEeC------------CCCEEEEECCc
Confidence 97 888888887676663 12678999886
No 35
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.07 E-value=5e-10 Score=114.22 Aligned_cols=115 Identities=12% Similarity=0.117 Sum_probs=88.8
Q ss_pred eeEEEeecCceEEeeeCccCeEEE--cc--ccccceeEEeeCCeeeceeEEEccc-----c---------cccCccCC--
Q 007977 431 ERAYKYRPVKVVEFELPRQQCVVY--LD--LKREECAHLFPAGRIYSQAFHLGGQ-----G---------FFLSAHCN-- 490 (582)
Q Consensus 431 ~~l~v~~~~~~ve~ydP~~~~W~~--L~--~~R~~~~vavl~g~IYn~iYviGG~-----g---------~~~dp~~n-- 490 (582)
+.+|++|+. .+++|||.+++|.. ++ .+|..+++++.+++| |++||. + ..|||.++
T Consensus 16 ~~i~~~GG~-~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~l----yv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 90 (318)
T 2woz_A 16 DLILLVNDT-AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQV----YVVGGLYVDEENKDQPLQSYFFQLDNVSSEW 90 (318)
T ss_dssp EEEEEECSS-EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCE----EEEESSCC-------CCCBEEEEEETTTTEE
T ss_pred chhhhcccc-ceEEECCCCCceecccCCccCCccceEEEEECCEE----EEECCcccCccccCCCccccEEEEeCCCCcE
Confidence 577887774 58999999999987 43 679999999999555 599994 1 12477665
Q ss_pred -----ccCCCCceEEEEEccc-------c--CCCCccccccccceeeccC---CCeeecCCCCceeecceeEeccccccc
Q 007977 491 -----MDQQSSFHCFGLFLGM-------Q--EKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFG 553 (582)
Q Consensus 491 -----M~~~R~~~~~~vl~G~-------~--~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~~ 553 (582)
|+.+|..|++++++|+ + +...++.+ ++||| +|+.+++||.++..+++++++
T Consensus 91 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~------ 158 (318)
T 2woz_A 91 VGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSV------LCYDPVAAKWSEVKNLPIKVYGHNVISHN------ 158 (318)
T ss_dssp EECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEE------EEEETTTTEEEEECCCSSCEESCEEEEET------
T ss_pred EECCCCCccccccceEEECCEEEEEcCccCCCCcccceE------EEEeCCCCCEeECCCCCCcccccEEEEEC------
Confidence 9999999999987766 2 22234454 99999 899999999999887766554
Q ss_pred ccccceecCCceEEEcCe
Q 007977 554 IPWTAFMADDSIYFINGN 571 (582)
Q Consensus 554 ~~~~~~~~~~~~~~i~~~ 571 (582)
+++|++||.
T Consensus 159 ---------~~iyv~GG~ 167 (318)
T 2woz_A 159 ---------GMIYCLGGK 167 (318)
T ss_dssp ---------TEEEEECCE
T ss_pred ---------CEEEEEcCC
Confidence 678899886
No 36
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=98.87 E-value=1e-09 Score=94.37 Aligned_cols=73 Identities=18% Similarity=0.247 Sum_probs=60.3
Q ss_pred EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHHHhhcc--CcccCCccEEEEecCCCCHHHHHHHHh
Q 007977 151 KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN--GMRESEQRYVTLRIHASEEAALMELLN 228 (582)
Q Consensus 151 ~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~--~~~Es~~~~v~l~~~~v~~~~f~~lL~ 228 (582)
++|.+||.+ |++|+||++ ||.+ ++.|+.+..|.|+ ++++.+++.+++
T Consensus 12 ~~F~v~r~v-A~~S~~ik~----------------------------m~~~~~~~~E~~~~~I~l~--~V~~~iL~kVie 60 (97)
T 4ajy_C 12 HEFIVKREH-ALTSGTIKA----------------------------MLSGPGQFAENETNEVNFR--EIPSHVLSKVCM 60 (97)
T ss_dssp CEEEEEHHH-HTTSHHHHH----------------------------HHCCC--------CEEECT--TSCHHHHHHHHH
T ss_pred cEEEecHHH-HHHhHHHHH----------------------------HHHhCCCccccCCCceECC--CCCHHHHHHHHH
Confidence 479999999 999999999 9987 6778778889988 999999999999
Q ss_pred ccc-----C---Cccc---cCccchHHHHHHhhchhhh
Q 007977 229 FMY-----S---STLS---TTTPTALLDVLMAADKFEV 255 (582)
Q Consensus 229 fiY-----T---g~l~---i~~~~~v~~ll~aAd~l~v 255 (582)
|+| + ++++ ++. +++.+|+.||++|+.
T Consensus 61 y~~~h~~~~~~~~~i~~~~i~~-~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 61 YFTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLDC 97 (97)
T ss_dssp HHHHHHHHTTCCSCCCCCCCCG-GGHHHHHHHHHHHTC
T ss_pred HHHHhcccCCCcCCCCcCcCCH-HHHHHHHHHHhhhCC
Confidence 999 5 6777 888 899999999999973
No 37
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.82 E-value=1.4e-08 Score=104.82 Aligned_cols=116 Identities=16% Similarity=0.105 Sum_probs=86.2
Q ss_pred eeEEEeec--CceEEeeeCc--cCeEEE---cc-ccccceeEEeeCCeeeceeEEEccc-c------------cccCccC
Q 007977 431 ERAYKYRP--VKVVEFELPR--QQCVVY---LD-LKREECAHLFPAGRIYSQAFHLGGQ-G------------FFLSAHC 489 (582)
Q Consensus 431 ~~l~v~~~--~~~ve~ydP~--~~~W~~---L~-~~R~~~~vavl~g~IYn~iYviGG~-g------------~~~dp~~ 489 (582)
+.+|++|+ .+.+.+||+. +++|.. || .+|.+|++++++|+|| ++||. . +.|||.+
T Consensus 20 ~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~ly----v~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 20 DTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLY----VFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEE----EECCEEECTTSCEEECCCEEEEETTT
T ss_pred CEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEE----EEcCCCCCCCccceeeccEEEEeCCC
Confidence 45777765 3578999997 599998 77 7899999999996555 99997 1 1347777
Q ss_pred C-------cc-CCCCceEEEEEccc----cCCC-------------------------------------Cccccccccc
Q 007977 490 N-------MD-QQSSFHCFGLFLGM----QEKG-------------------------------------SVSFAVDYEF 520 (582)
Q Consensus 490 n-------M~-~~R~~~~~~vl~G~----~~~~-------------------------------------~lssvV~~~~ 520 (582)
+ |. .+|..|++++++|+ .|.. .++.+
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----- 170 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFL----- 170 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEE-----
T ss_pred CcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccE-----
Confidence 6 77 99999998877766 1211 12343
Q ss_pred eeeccC---CCeeecCCCCceee-cceeEecccccccccccceecCCceEEEcCe
Q 007977 521 AARIKP---TEEYVSKYKGNYTF-TGGKAVGYRNLFGIPWTAFMADDSIYFINGN 571 (582)
Q Consensus 521 aErYdP---~W~~va~m~~~~~~-~g~~avg~~~~~~~~~~~~~~~~~~~~i~~~ 571 (582)
++||| +|+.+++||.++.. ++.++++ +++|++||.
T Consensus 171 -~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~---------------~~iyv~GG~ 209 (357)
T 2uvk_A 171 -LSFDPSTQQWSYAGESPWYGTAGAAVVNKG---------------DKTWLINGE 209 (357)
T ss_dssp -EEEETTTTEEEEEEECSSCCCBSCEEEEET---------------TEEEEECCE
T ss_pred -EEEeCCCCcEEECCCCCCCCcccccEEEEC---------------CEEEEEeee
Confidence 99999 89999999976554 5544444 678888885
No 38
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.80 E-value=1.9e-08 Score=103.81 Aligned_cols=109 Identities=14% Similarity=0.058 Sum_probs=76.2
Q ss_pred ceEEeeeCccCeEEE---cccccc-ceeEEeeCCeeeceeEEEccc---c------ccc--CccCC-------ccCCC--
Q 007977 440 KVVEFELPRQQCVVY---LDLKRE-ECAHLFPAGRIYSQAFHLGGQ---G------FFL--SAHCN-------MDQQS-- 495 (582)
Q Consensus 440 ~~ve~ydP~~~~W~~---L~~~R~-~~~vavl~g~IYn~iYviGG~---g------~~~--dp~~n-------M~~~R-- 495 (582)
+.+++|||.+++|.. ||.+|. .+++++.+++|| ++||. + ..| ||.++ |+.+|
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iy----v~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~ 243 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTW----LINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGV 243 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEE----EECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEE----EEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccc
Confidence 689999999999998 776554 499999996555 99996 1 123 45665 76665
Q ss_pred CceEEEEEccc-------cCCC-----------------CccccccccceeeccC---CCeeecCCCCceeecceeEecc
Q 007977 496 SFHCFGLFLGM-------QEKG-----------------SVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGY 548 (582)
Q Consensus 496 ~~~~~~vl~G~-------~~~~-----------------~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~ 548 (582)
..|++++++|+ +..+ .+.++ |+||| +|+.+++||.++..++.++++
T Consensus 244 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~yd~~~~~W~~~~~~p~~r~~~~~~~~~- 316 (357)
T 2uvk_A 244 AGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYST------DIHLWHNGKWDKSGELSQGRAYGVSLPWN- 316 (357)
T ss_dssp BSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECC------EEEECC---CEEEEECSSCCBSSEEEEET-
T ss_pred ccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeE------EEEecCCCceeeCCCCCCCcccceeEEeC-
Confidence 46667776665 1111 12343 99999 999999999999887665555
Q ss_pred cccccccccceecCCceEEEcCeee
Q 007977 549 RNLFGIPWTAFMADDSIYFINGNLH 573 (582)
Q Consensus 549 ~~~~~~~~~~~~~~~~~~~i~~~~~ 573 (582)
+++|++||.-.
T Consensus 317 --------------~~i~v~GG~~~ 327 (357)
T 2uvk_A 317 --------------NSLLIIGGETA 327 (357)
T ss_dssp --------------TEEEEEEEECG
T ss_pred --------------CEEEEEeeeCC
Confidence 78999999643
No 39
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.62 E-value=6e-08 Score=110.65 Aligned_cols=116 Identities=11% Similarity=-0.100 Sum_probs=85.7
Q ss_pred eEEEeec-------CceEEeeeCccCeEEE---ccccccceeEEee-CCeeeceeEEEcccc-----cccCccCC-----
Q 007977 432 RAYKYRP-------VKVVEFELPRQQCVVY---LDLKREECAHLFP-AGRIYSQAFHLGGQG-----FFLSAHCN----- 490 (582)
Q Consensus 432 ~l~v~~~-------~~~ve~ydP~~~~W~~---L~~~R~~~~vavl-~g~IYn~iYviGG~g-----~~~dp~~n----- 490 (582)
.+|++|+ .+.+++||+.+++|.. ||.+|..|+++++ +|+|| ++||.. +.|||.++
T Consensus 453 ~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iy----v~GG~~~~~~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 453 QLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVL----ILGGVTEGPAMLLYNVTEEIFKDV 528 (695)
T ss_dssp EEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEE----EECCBCSSCSEEEEETTTTEEEEC
T ss_pred EEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEE----EECCCCCCCCEEEEECCCCceEEc
Confidence 4666554 4689999999999998 8899999999997 85555 999972 24566654
Q ss_pred -----ccCCCCceEEEEEc---cc-------cCC--CCccccccccceeeccC---C------CeeecCCC-Cceeecce
Q 007977 491 -----MDQQSSFHCFGLFL---GM-------QEK--GSVSFAVDYEFAARIKP---T------EEYVSKYK-GNYTFTGG 543 (582)
Q Consensus 491 -----M~~~R~~~~~~vl~---G~-------~~~--~~lssvV~~~~aErYdP---~------W~~va~m~-~~~~~~g~ 543 (582)
|+.+|..|++++++ |+ +.. ..++.+ ++||| + |+.+++|| .++..++.
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v------~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~ 602 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKA------IIFKYDAENATEPITVIKKLQHPLFQRYGSQI 602 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEE------EEEEECTTCSSCCEEEEEEEECGGGCCBSCEE
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcE------EEEEccCCccccceEEEEcCCCCCCCcccceE
Confidence 78899999977765 33 212 224453 99999 6 89998874 67777666
Q ss_pred eEecccccccccccceecCCceEEEcCe
Q 007977 544 KAVGYRNLFGIPWTAFMADDSIYFINGN 571 (582)
Q Consensus 544 ~avg~~~~~~~~~~~~~~~~~~~~i~~~ 571 (582)
++++ ++++|++||.
T Consensus 603 ~~~~--------------~~~iyv~GG~ 616 (695)
T 2zwa_A 603 KYIT--------------PRKLLIVGGT 616 (695)
T ss_dssp EEEE--------------TTEEEEECCB
T ss_pred EEeC--------------CCEEEEECCc
Confidence 6666 3688899886
No 40
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.62 E-value=4.6e-09 Score=98.52 Aligned_cols=100 Identities=10% Similarity=0.227 Sum_probs=58.2
Q ss_pred EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHHHhhccCcccCCccEEEEecCCCCHHHHHHHHhcc
Q 007977 151 KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAALMELLNFM 230 (582)
Q Consensus 151 ~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~~~~Es~~~~v~l~~~~v~~~~f~~lL~fi 230 (582)
+.|.+|+.+ |..|++|+. ||.+.. ....|.|+ ++++.+++.+++|+
T Consensus 14 ~~f~v~~~v-A~~S~~ik~----------------------------ml~~~~---~~~~Ipl~--~V~~~iL~kVieyc 59 (160)
T 2p1m_A 14 ESFEVEEAV-ALESQTIAH----------------------------MVEDDC---VDNGVPLP--NVTSKILAKVIEYC 59 (160)
T ss_dssp ------CHH-HHTCTTTC-------------------------------------------CCT--TSCHHHHHHHHHC-
T ss_pred CEEEECHHH-HHHhHHHHH----------------------------HHHccC---CCCceeCC--cCcHHHHHHHHHHH
Confidence 479999998 899999999 998753 23467776 99999999999999
Q ss_pred cCCc---------------------------cccCccchHHHHHHhhchhhhhhhhhhhhhhcccCcC---Cccchhhhc
Q 007977 231 YSST---------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPM---TCESALLYL 280 (582)
Q Consensus 231 YTg~---------------------------l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~l~l---~~~n~~~~l 280 (582)
|+.. +.++. +++.+|+.||++|+|..|.++|++++.. .+ +++.+-.++
T Consensus 60 ~~h~~~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~eeir~~f 137 (160)
T 2p1m_A 60 KRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQ-ATLFELILAANYLNIKNLLDLTCQTVAD-MIKGKTPEEIRTTF 137 (160)
T ss_dssp ------------------------------------------CHHHHHHTTCHHHHHHHHHHHHH-TTTTCCHHHHHHHT
T ss_pred HHcccCCCcccccccccccccchhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHc
Confidence 9986 35666 8999999999999999999999999987 46 666666666
Q ss_pred cccchh
Q 007977 281 DLPSSV 286 (582)
Q Consensus 281 ~la~~~ 286 (582)
.++.-+
T Consensus 138 ~I~nd~ 143 (160)
T 2p1m_A 138 NIKNDF 143 (160)
T ss_dssp TCCCCC
T ss_pred CCCCCC
Confidence 665443
No 41
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=98.61 E-value=1e-08 Score=94.16 Aligned_cols=97 Identities=13% Similarity=0.193 Sum_probs=80.3
Q ss_pred EEEEE---EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHHHhhccCcccCCccEEEEecCCCCHHH
Q 007977 146 TVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAA 222 (582)
Q Consensus 146 V~l~v---~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~~~~Es~~~~v~l~~~~v~~~~ 222 (582)
|++.. +.|.+|+.+ |..|++++. ||.+.- ...|.|+ ++++.+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~~ik~----------------------------ml~~~~----~~~Ipl~--~V~~~i 48 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSVTIKT----------------------------MLEDLG----MDPVPLP--NVNAAI 48 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCHHHHH----------------------------HHHHTC----CSSEECT--TCCHHH
T ss_pred EEEEeCCCCEEEecHHH-HHHhHHHHH----------------------------HHHhcC----CCceecC--CcCHHH
Confidence 55555 479999998 899999999 998631 3468887 999999
Q ss_pred HHHHHhcccCCc--------------------------cccCccchHHHHHHhhchhhhhhhhhhhhhhcccCcCCccch
Q 007977 223 LMELLNFMYSST--------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRNLPMTCESA 276 (582)
Q Consensus 223 f~~lL~fiYTg~--------------------------l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~l~l~~~n~ 276 (582)
++.+++|+|+.. +.++. +++.+|+.||++|++..|.++|++++.. .+...+.
T Consensus 49 L~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~-~~l~eLi~AAnyL~I~~Lldl~c~~vA~-~ikgkt~ 126 (141)
T 1fs1_B 49 LKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIKGLLDVTCKTVAN-MIKGKTP 126 (141)
T ss_dssp HHHHHHHHHHHTTCC-----------------HHHHHHTCSCH-HHHHHHHHHHHHHTCHHHHHHHHHHHHH-HHTTCCH
T ss_pred HHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCH-HHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHcCCCH
Confidence 999999999876 56666 8999999999999999999999999987 4655554
Q ss_pred hhh
Q 007977 277 LLY 279 (582)
Q Consensus 277 ~~~ 279 (582)
-.+
T Consensus 127 eei 129 (141)
T 1fs1_B 127 EEI 129 (141)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 42
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.28 E-value=5e-07 Score=101.81 Aligned_cols=89 Identities=12% Similarity=0.024 Sum_probs=65.2
Q ss_pred ceEEeeeCccCeEEE---cccccccee--EEe-eCCeeeceeEEEccc----ccccCccCC-------ccCCCCceEEEE
Q 007977 440 KVVEFELPRQQCVVY---LDLKREECA--HLF-PAGRIYSQAFHLGGQ----GFFLSAHCN-------MDQQSSFHCFGL 502 (582)
Q Consensus 440 ~~ve~ydP~~~~W~~---L~~~R~~~~--vav-l~g~IYn~iYviGG~----g~~~dp~~n-------M~~~R~~~~~~v 502 (582)
..+.+|||.+++|.. |+.+|..++ +++ .+|+|| ++||. -..|||.++ |+.+|.+|++++
T Consensus 219 ~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~ly----v~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~ 294 (656)
T 1k3i_A 219 TLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIV----VTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSAT 294 (656)
T ss_dssp EEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEE----EECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEE
T ss_pred EEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEE----EeCCCCCCceEEecCcCCceeECCCCCccccccceEE
Confidence 368899999999987 667776654 443 575555 99997 245688765 999999999998
Q ss_pred E-ccc----cC----CCCccccccccceeeccC---CCeee-----cCCCCce
Q 007977 503 F-LGM----QE----KGSVSFAVDYEFAARIKP---TEEYV-----SKYKGNY 538 (582)
Q Consensus 503 l-~G~----~~----~~~lssvV~~~~aErYdP---~W~~v-----a~m~~~~ 538 (582)
+ +|+ .| ...++++ |+||| +|+.+ +||+..+
T Consensus 295 ~~dg~iyv~GG~~~~~~~~~~~------e~yd~~t~~W~~~~~~~~~p~~~~~ 341 (656)
T 1k3i_A 295 MSDGRVFTIGGSWSGGVFEKNG------EVYSPSSKTWTSLPNAKVNPMLTAD 341 (656)
T ss_dssp CTTSCEEEECCCCCSSSCCCCE------EEEETTTTEEEEETTSCSGGGCCCC
T ss_pred ecCCeEEEEeCcccCCcccccc------eEeCCCCCcceeCCCcccccccccc
Confidence 8 776 12 2234454 99999 89998 5666553
No 43
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.15 E-value=1.7e-06 Score=97.39 Aligned_cols=107 Identities=11% Similarity=0.096 Sum_probs=76.5
Q ss_pred eEEeeeCccCeEEE-ccccccceeEEee--CCeeeceeEEEccc-----c---------cccCccCC-------ccCCCC
Q 007977 441 VVEFELPRQQCVVY-LDLKREECAHLFP--AGRIYSQAFHLGGQ-----G---------FFLSAHCN-------MDQQSS 496 (582)
Q Consensus 441 ~ve~ydP~~~~W~~-L~~~R~~~~vavl--~g~IYn~iYviGG~-----g---------~~~dp~~n-------M~~~R~ 496 (582)
.++.|||.+++|.. .+.++..++++++ +|+|| ++||. + ..|||.++ |+.+|.
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~~~~~~av~~~~g~l~----v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~ 242 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGRVL----MWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD 242 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSSCCSEEEEETTTTEEE----EEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC
T ss_pred ccccCCCCCCeeeeeccCCCCceeEEEEecCCEEE----EEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC
Confidence 47889999999998 5566777777777 86655 99985 1 13488776 778887
Q ss_pred ceE--EEE-Eccc---cCCCCccccccccceeeccC---CCeeecCCCCceeecceeEecccccccccccceecCCceEE
Q 007977 497 FHC--FGL-FLGM---QEKGSVSFAVDYEFAARIKP---TEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTAFMADDSIYF 567 (582)
Q Consensus 497 ~~~--~~v-l~G~---~~~~~lssvV~~~~aErYdP---~W~~va~m~~~~~~~g~~avg~~~~~~~~~~~~~~~~~~~~ 567 (582)
.|| .++ .+|+ .|.....++ ++||| +|+.+++|+.+|..++.+++. |+++|+
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~~~~~v------~~yd~~t~~W~~~~~~~~~R~~~s~~~~~--------------dg~iyv 302 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGNDAKKT------SLYDSSSDSWIPGPDMQVARGYQSSATMS--------------DGRVFT 302 (656)
T ss_dssp CSSCEEEECTTSCEEEECSSSTTCE------EEEEGGGTEEEECCCCSSCCSSCEEEECT--------------TSCEEE
T ss_pred CccccccCCCCCCEEEeCCCCCCce------EEecCcCCceeECCCCCccccccceEEec--------------CCeEEE
Confidence 765 333 3555 121111243 99999 899999999999888766662 368888
Q ss_pred EcCe
Q 007977 568 INGN 571 (582)
Q Consensus 568 i~~~ 571 (582)
+||.
T Consensus 303 ~GG~ 306 (656)
T 1k3i_A 303 IGGS 306 (656)
T ss_dssp ECCC
T ss_pred EeCc
Confidence 8883
No 44
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=97.75 E-value=1.5e-05 Score=68.53 Aligned_cols=77 Identities=19% Similarity=0.286 Sum_probs=63.6
Q ss_pred EEEEE---EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHHHhhccCcccCCccEEEEecCCCCHHH
Q 007977 146 TVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMRESEQRYVTLRIHASEEAA 222 (582)
Q Consensus 146 V~l~v---~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~~~~Es~~~~v~l~~~~v~~~~ 222 (582)
|++.. ..|.+++.+ |..|.+++. |+.+++ |.....|.|+ +++..+
T Consensus 6 v~L~SsDg~~f~V~~~v-A~~S~~ik~----------------------------ml~~~~-e~~~~~Iplp--~V~~~i 53 (99)
T 1hv2_A 6 VTLVSKDDKEYEISRSA-AMISPTLKA----------------------------MIEGPF-RESKGRIELK--QFDSHI 53 (99)
T ss_dssp EEEEETTTEEEEEEHHH-HTTCHHHHH----------------------------HHHSST-TTCTTEEEET--TSCHHH
T ss_pred EEEEecCCCEEEECHHH-HHHhHHHHH----------------------------HHhccc-ccCCCceecC--CcCHHH
Confidence 45555 479999997 899999999 998876 6556789998 999999
Q ss_pred HHHHHhcccCCc--------------cccCccchHHHHHHhhchhhh
Q 007977 223 LMELLNFMYSST--------------LSTTTPTALLDVLMAADKFEV 255 (582)
Q Consensus 223 f~~lL~fiYTg~--------------l~i~~~~~v~~ll~aAd~l~v 255 (582)
++.+++|+|... ..++. +++.+|+.||++|++
T Consensus 54 L~kVieyc~~h~~~~~~~~~~~~i~~w~vd~-~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 54 LEKAVEYLNYNLKYSGVSEDDDEIPEFEIPT-EMSLELLLAADYLSI 99 (99)
T ss_dssp HHHHHHHHHHHHHHHHHCSSCSSCCCCCCCH-HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhcccCCCccccccCCCccCCH-HHHHHHHHHHHHhCc
Confidence 999999998754 13455 789999999999975
No 45
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=97.63 E-value=1.8e-05 Score=67.67 Aligned_cols=73 Identities=19% Similarity=0.245 Sum_probs=56.9
Q ss_pred EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHHHhhcc-Cc-ccCCccEEEEecCCCCHHHHHHHHh
Q 007977 151 KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN-GM-RESEQRYVTLRIHASEEAALMELLN 228 (582)
Q Consensus 151 ~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~-~~-~Es~~~~v~l~~~~v~~~~f~~lL~ 228 (582)
..|.+++.+ |..|++++. |+.+ +. .|+....|.|+ +++..+++.+++
T Consensus 11 ~~f~V~~~~-A~~S~~ik~----------------------------ml~~~~~~~e~~~~~Ipl~--~V~~~iL~kVie 59 (96)
T 2fnj_C 11 HEFIVKREH-ALTSGTIKA----------------------------MLSGPGQFAENETNEVNFR--EIPSHVLSKVCM 59 (96)
T ss_dssp CEEEEEHHH-HTTSHHHHH----------------------------HHHCC--------CEEECS--SCCHHHHHHHHH
T ss_pred CEEEeCHHH-HHHhHHHHH----------------------------HHHccCCcccccCCceeCC--CCCHHHHHHHHH
Confidence 379999997 889999999 9986 33 56666788888 999999999999
Q ss_pred cccCCc-----------cccCccchHHHHHHhhchhhh
Q 007977 229 FMYSST-----------LSTTTPTALLDVLMAADKFEV 255 (582)
Q Consensus 229 fiYTg~-----------l~i~~~~~v~~ll~aAd~l~v 255 (582)
|+|... ..++. +++.+|+.||++|++
T Consensus 60 yc~~h~~~~~~~~~i~~w~vd~-~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 60 YFTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLDC 96 (96)
T ss_dssp HHHHHHHHHSCCSCCCCCCCCT-TTHHHHHHHHHHHTC
T ss_pred HHHHccccCCCcccCCCcccCH-HHHHHHHHHHHHhCc
Confidence 998754 23555 899999999999975
No 46
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=97.47 E-value=3.8e-05 Score=72.44 Aligned_cols=92 Identities=11% Similarity=0.249 Sum_probs=70.2
Q ss_pred eEEEEE---EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHHHhhccCcc----cCCccEEEEecCC
Q 007977 145 STVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR----ESEQRYVTLRIHA 217 (582)
Q Consensus 145 DV~l~v---~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~~~~----Es~~~~v~l~~~~ 217 (582)
-|+|.. ..|.+++.+ |..|.+++. |+.+... +.....|.|+ +
T Consensus 8 ~i~L~SsDG~~F~V~~~v-A~~S~tIk~----------------------------ml~~~~~~~~~~~~~~~Iplp--n 56 (169)
T 3v7d_A 8 NVVLVSGEGERFTVDKKI-AERSLLLKN----------------------------YLNDMGDDDDEDDDEIVMPVP--N 56 (169)
T ss_dssp EEEEECTTCCEEEEEHHH-HTTSHHHHH----------------------------HHHC-----------CEEECT--T
T ss_pred eEEEEeCCCCEEEecHHH-HHHhHHHHH----------------------------HHHhcCcccccccCCCceeeC--C
Confidence 455555 379999998 788999999 8875322 1223668887 9
Q ss_pred CCHHHHHHHHhcccCCc-------------------------cccCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 218 SEEAALMELLNFMYSST-------------------------LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 218 v~~~~f~~lL~fiYTg~-------------------------l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
++..+|+.+++|++... +.++. +++.+|+.||++|+|..|.++|++.+..
T Consensus 57 V~s~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~i~~wD~~Fl~vd~-~~LfeLi~AAnyLdIk~Lldl~c~~vA~ 131 (169)
T 3v7d_A 57 VRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFLKVDQ-EMLYEIILAANYLNIKPLLDAGCKVVAE 131 (169)
T ss_dssp CCHHHHHHHHHHHHHTTTCCCCC--------CCCCCHHHHHHTCSCH-HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcccCCCcccccccccccccccHHHHHHHcCCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 99999999999997643 23444 7899999999999999999999998865
No 47
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.44 E-value=0.00016 Score=63.00 Aligned_cols=92 Identities=17% Similarity=0.234 Sum_probs=70.5
Q ss_pred eEEEEEE--EEEeeeeeccccCC-ccccccccccccccchhhhHHHHHHHHHHHHHhhccCcc----cCCccEEEEecCC
Q 007977 145 STVLRVK--TVHISSPILAAKSP-FFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR----ESEQRYVTLRIHA 217 (582)
Q Consensus 145 DV~l~v~--~f~aHr~ILaa~S~-yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~~~~----Es~~~~v~l~~~~ 217 (582)
-|+|.|+ .|...+..|+...+ +|.+ ||++... ....+++-+ |
T Consensus 7 ~v~LNVGG~~f~t~~~TL~~~p~s~L~~----------------------------~~~~~~~~~~~~d~~~~~fi---D 55 (107)
T 3drz_A 7 WVRLNVGGTYFLTTRQTLCRDPKSFLYR----------------------------LCQADPDLDSDKDETGAYLI---D 55 (107)
T ss_dssp EEEEEETTEEEEEEHHHHTSSTTSHHHH----------------------------HHTTCGGGGGGBCTTSCEEE---C
T ss_pred EEEEEECCEEEEECHHHHhcCCCcchhH----------------------------HHhcCCCCCcCCCCCceEEe---c
Confidence 4566773 69999999987653 4555 7765421 113355666 6
Q ss_pred CCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhcc
Q 007977 218 SEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLR 267 (582)
Q Consensus 218 v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~ 267 (582)
-+|..|+.+|+|+.+|++.+........++.-|++|++++|++.|.+.+.
T Consensus 56 Rdp~~F~~IL~~lr~g~l~~p~~~~~~~l~~Ea~fy~l~~L~~~l~~~i~ 105 (107)
T 3drz_A 56 RDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIR 105 (107)
T ss_dssp SCHHHHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHhCCCeeCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 89999999999999999987653456889999999999999999998764
No 48
>1by2_A MAC-2 binding protein; extracellular module, scavenger receptor, tumour-associated extracellular matrix, glycosylated protein; HET: NAG; 2.00A {Homo sapiens} SCOP: d.170.1.1
Probab=97.22 E-value=2.2e-05 Score=69.85 Aligned_cols=58 Identities=17% Similarity=0.199 Sum_probs=51.6
Q ss_pred CCCCcccccCCccccceeeEeeccCCCCCCCCCCCCcchhhhhcccccchhhhcccCcceecccceeeeccc
Q 007977 24 DSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCNM 95 (582)
Q Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 95 (582)
-.|++|+.+|++++||+|++..+..++....+|+|.++| |. +++.|.+.|..+.+|..
T Consensus 34 VCdd~W~~~~A~VvCRqLG~~~a~~~~~~~~fg~g~g~i--~l------------d~v~C~G~E~sL~~C~~ 91 (119)
T 1by2_A 34 VCDNLWDLTDASVVCRALGFENATQALGRAAFGQGSGPI--ML------------DEVQCTGTEASLADCKS 91 (119)
T ss_dssp EBCTTCCHHHHHHHHHHTTCSCEEEEECTTTTCCCCSCE--EE------------CSCBCCSCCSSGGGSBC
T ss_pred EEcCcCcchHeEEEEEecCCCccccccccceeccCCCCE--EE------------ecCEecCCCCcHHhCCC
Confidence 458899999999999999999888777888999999999 88 78889999999999954
No 49
>2oya_A Macrophage receptor marco; extracellular matrix, scavenger receptor cysteine-rich (SRCR macrophage receptor, ligand binding, basic cluster; 1.77A {Mus musculus} PDB: 2oy3_A
Probab=96.65 E-value=8.8e-05 Score=64.19 Aligned_cols=56 Identities=21% Similarity=0.268 Sum_probs=47.7
Q ss_pred CCCCcccccCCccccceeeEeeccCCCCCCCCCCCCcchhhhhcccccchhhhcccCcceecccceeeecccc
Q 007977 24 DSDFGFAFNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCNMP 96 (582)
Q Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 96 (582)
-.|++|+.++++++||+|++.. ++..+.+|+|.++| |. +++.|.+.|..+.+|...
T Consensus 29 VCdd~w~~~~A~VvCRqLG~~~---a~~~~~fg~g~g~i--~l------------d~v~C~G~E~sL~~C~~~ 84 (102)
T 2oya_A 29 ICDDDWDNNDATVFCRMLGYSR---GRALSSYGGGSGNI--WL------------DNVNCRGTENSLWDCSKN 84 (102)
T ss_dssp EBCTTCCHHHHHHHHHHTTCSC---EEEETTCCCCCSCE--EE------------CSCBCCSCCSSGGGSBCS
T ss_pred EECCcCCHHHhhhhhhhhcCCC---CCCccccCCCCCCe--EE------------ecCEeCCCCCCHHHCCCC
Confidence 3578999999999999999987 34467899999999 88 788899999999999543
No 50
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=96.64 E-value=0.00063 Score=59.77 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=57.9
Q ss_pred EEEEE---EEEEeeeeeccccCCccccccccccccccchhhhHHHHHHHHHHHHHhhcc--CcccCCccEEEEecCCCCH
Q 007977 146 TVLRV---KTVHISSPILAAKSPFFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSN--GMRESEQRYVTLRIHASEE 220 (582)
Q Consensus 146 V~l~v---~~f~aHr~ILaa~S~yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~--~~~Es~~~~v~l~~~~v~~ 220 (582)
|+|.. ..|.+++. .|..|..++. |+.+ .+.|.....|.|+ +++.
T Consensus 19 v~L~SsDG~~F~V~~~-~A~~S~tIk~----------------------------ml~~~~~~~e~~~~~Iplp--nV~s 67 (112)
T 1vcb_B 19 VKLISSDGHEFIVKRE-HALTSGTIKA----------------------------MLSGPGQFAENETNEVNFR--EIPS 67 (112)
T ss_dssp EEEECTTSCEEEEEHH-HHHTSHHHHH----------------------------HSSCC--------CEEECS--SCCH
T ss_pred EEEEcCCCCEEEECHH-HHHHhHHHHH----------------------------HHHhcCCcccccCCceeCC--CCCH
Confidence 45554 37999999 4688999999 9975 2345445678887 9999
Q ss_pred HHHHHHHhcccCCcc-----------ccCccchHHHHHHhhchhhh
Q 007977 221 AALMELLNFMYSSTL-----------STTTPTALLDVLMAADKFEV 255 (582)
Q Consensus 221 ~~f~~lL~fiYTg~l-----------~i~~~~~v~~ll~aAd~l~v 255 (582)
.+++.+++|++...- .++. +++.+|+.||++|++
T Consensus 68 ~iL~kVieyc~~h~~~~~~~~~i~~w~vd~-~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 68 HVLSKVCMYFTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFLDC 112 (112)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCCCCCCCH-HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhhhccCCcCCCCCcccCH-HHHHHHHHHHHHhCc
Confidence 999999999976431 3555 799999999999975
No 51
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=95.78 E-value=0.0087 Score=57.70 Aligned_cols=94 Identities=17% Similarity=0.225 Sum_probs=70.9
Q ss_pred eeEEEEEE--EEEeeeeeccccCC-ccccccccccccccchhhhHHHHHHHHHHHHHhhccCcc----cCCccEEEEecC
Q 007977 144 LSTVLRVK--TVHISSPILAAKSP-FFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGMR----ESEQRYVTLRIH 216 (582)
Q Consensus 144 ~DV~l~v~--~f~aHr~ILaa~S~-yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~~~~----Es~~~~v~l~~~ 216 (582)
--|+|.|+ .|...+..|..... +|.+ ||++... ....+.+-+
T Consensus 12 ~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~----------------------------lfs~~~~~~~~~De~geyFI--- 60 (202)
T 3drx_A 12 KWVRLNVGGTYFLTTRQTLCRDPKSFLYR----------------------------LCQADPDLDSDKDETGAYLI--- 60 (202)
T ss_dssp CEEEEEETTEEEEEETTGGGSCTTSSTHH----------------------------HHSCCCC----BCTTCCEEE---
T ss_pred CEEEEEECCEEEEEeHHHHhCCCcchHHH----------------------------HhcCccccCcccCCCccEEe---
Confidence 34556673 68899999976543 5555 7765421 112345655
Q ss_pred CCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 217 ASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 217 ~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
|-+|..|+.+|+|+.+|++.+...-....++.-|++|+|+.|.+.|.+.|..
T Consensus 61 DRDP~~F~~ILnyLRtG~L~lP~~~~~~~l~eEA~FygL~~Lv~~l~~~i~e 112 (202)
T 3drx_A 61 DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNITSLIKLVKDKIRE 112 (202)
T ss_dssp CSCSTTHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHhcCCccCCCCCCCHHHHHHHHHHCCcHHHHHHHHHHHHH
Confidence 6899999999999999999886534567899999999999999999998854
No 52
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=94.98 E-value=0.027 Score=49.48 Aligned_cols=94 Identities=10% Similarity=0.039 Sum_probs=67.1
Q ss_pred eeEEEEEE--EEEeeeeeccccCC-ccccccccccccccchhhhHHHHHHHHHHHHHhhccCc-ccCCccEEEEecCCCC
Q 007977 144 LSTVLRVK--TVHISSPILAAKSP-FFYKVNVPSLVYAFCIPWFLLLWLVILCIFLQLFSNGM-RESEQRYVTLRIHASE 219 (582)
Q Consensus 144 ~DV~l~v~--~f~aHr~ILaa~S~-yF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~mf~~~~-~Es~~~~v~l~~~~v~ 219 (582)
--|+|.|+ .|...+..|..... .+.+ ||++.. .....+++-+ +-+
T Consensus 5 ~~V~LNVGG~~f~T~~~TL~~~P~s~L~~----------------------------l~~~~~~~~~~~g~~Fi---DRd 53 (115)
T 3kvt_A 5 NRVIINVGGIRHETYKATLKKIPATRLSR----------------------------LTEGMLNYDPVLNEYFF---DRH 53 (115)
T ss_dssp CEEEEEETTEEEEEEHHHHTTSCSSTTTT----------------------------CCTTSTTEETTTTEEEE---CSC
T ss_pred CEEEEEECCEEEEecHHHHhcCCCccHHH----------------------------HhcCCCCCCCCCCcEEE---ecC
Confidence 34667774 68888888876543 3344 665421 1123456666 689
Q ss_pred HHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhh--hhhhhhccc
Q 007977 220 EAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCM--RYCSRLLRN 268 (582)
Q Consensus 220 ~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~--~~C~~~L~~ 268 (582)
|..|+.+|+|+.+|++.+.....+..++.-|++|+|+... ..|...+.+
T Consensus 54 p~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea~fy~i~~~~l~~CC~~~~~~ 104 (115)
T 3kvt_A 54 PGVFAQIINYYRSGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWMTYTA 104 (115)
T ss_dssp TTTHHHHHHHHHHSCBCCCSSSCHHHHHHHHHHHTCCGGGBCGGGSHHHHS
T ss_pred hHHHHHHHHHhcCCCCCCCCcccHHHHHHHHHHhCCChHHHHHHHHHHHHh
Confidence 9999999999999999876544678999999999999876 456655554
No 53
>2jop_A T-cell surface glycoprotein CD5; domain 1, scavenger receptor cysteine rich, SRCR, immune system; NMR {Homo sapiens} PDB: 2jp0_A
Probab=94.80 E-value=0.0035 Score=56.50 Aligned_cols=56 Identities=13% Similarity=-0.066 Sum_probs=45.8
Q ss_pred CCCCCccc--------ccCCccccceeeEeeccCCCCCCCCCCCCcchhhhhcccccchhhhcccCcceecccceeeecc
Q 007977 23 PDSDFGFA--------FNDSNFSDRVLRIEIMPDLPDSKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQCN 94 (582)
Q Consensus 23 ~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 94 (582)
.-.|++|+ .+||+++||+|++..+..++....+|.|.++| | |.+.|..+.+|.
T Consensus 55 TVCdd~W~~~~~~w~~~~~A~VVCRqLG~g~a~~~~~~~~fg~g~g~I--~-----------------C~G~E~sL~~C~ 115 (131)
T 2jop_A 55 MVCSQSWGRSSKQWEDPSQASKVCQRLNCGDPLSLGPFLKTYTPQSSI--I-----------------CYGQLGSFSNCS 115 (131)
T ss_dssp ECCSSTBTCCCSSCSCCCSCHHHHHHTTSSSCEEEEECSSCSCTTTSE--E-----------------EBSSTTCCSCEE
T ss_pred EEECCcCccccccccchhhhhhhhhhcCCCchhhcccccccCCCCCCE--E-----------------EeCCCCCHHHCC
Confidence 34588999 99999999999999887777777899998888 5 677778888885
Q ss_pred ccC
Q 007977 95 MPD 97 (582)
Q Consensus 95 ~~~ 97 (582)
...
T Consensus 116 ~~~ 118 (131)
T 2jop_A 116 HSR 118 (131)
T ss_dssp ECC
T ss_pred CcC
Confidence 443
No 54
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=92.78 E-value=0.18 Score=44.72 Aligned_cols=56 Identities=9% Similarity=0.083 Sum_probs=44.9
Q ss_pred ccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhh--hhhhhhc
Q 007977 208 QRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCM--RYCSRLL 266 (582)
Q Consensus 208 ~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~--~~C~~~L 266 (582)
.+.+-+ |=++..|+.+|+|+-+|++.+.....+..++.-|++|+|+.+. .+|.+-+
T Consensus 52 ~g~~Fi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~~Ea~fy~i~~l~l~~cC~~~~ 109 (124)
T 1s1g_A 52 TKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCCYEEY 109 (124)
T ss_dssp SCSEEE---CSCHHHHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHTTCCGGGBCHHHHHHH
T ss_pred CCcEEE---cCChHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 455666 6899999999999999999876534688999999999999884 4455444
No 55
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=91.77 E-value=0.024 Score=62.99 Aligned_cols=56 Identities=13% Similarity=0.040 Sum_probs=44.2
Q ss_pred CCCCcccccCCccccceeeEeeccCCCC-CCCCCCCCcchhhhhcccccchhhhcccCcceecccceeeec
Q 007977 24 DSDFGFAFNDSNFSDRVLRIEIMPDLPD-SKSDGDACSSIADWARNRKRRREEIKKDTVDVLVQREQILQC 93 (582)
Q Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 93 (582)
-.|++|+.+||+|+||+|++..+..+.. ...+|.|.++| |. +++.|.+.|..+.+|
T Consensus 122 VCd~~w~~~~A~VvCrqLG~~~~~~~~~~~~~~~~g~g~~--~~------------~~v~C~G~E~sl~~C 178 (565)
T 2xrc_A 122 ICKSSWSMREANVACLDLGFQQGADTQRRFKLSDLSINST--EC------------LHVHCRGLETSLAEC 178 (565)
T ss_dssp BCTTSCCHHHHHHHHHHTTCTTCBCSSCCCCCCSSSCCCC--CC------------BEEECCSCCSCGGGS
T ss_pred eeCCCCChhhceehhhhcCCchhhhhhcccccCCCCcCcc--eE------------EEeEeCCccCchhhc
Confidence 4589999999999999999998876533 45667788888 87 566677777777777
No 56
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=91.42 E-value=0.14 Score=44.02 Aligned_cols=55 Identities=11% Similarity=0.126 Sum_probs=44.1
Q ss_pred ccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhh--hhhhhh
Q 007977 208 QRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCM--RYCSRL 265 (582)
Q Consensus 208 ~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~--~~C~~~ 265 (582)
.+.+-+ |=+|..|+.+|+|+-+|++.+.....+..++.-|++|+|+.+. .+|.+.
T Consensus 39 ~~~~Fi---DRdp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~fy~i~~l~~~~cc~~~ 95 (105)
T 1nn7_A 39 TQQYFF---DRDPDIFRHILNFYRTGKLHYPRHECISAYDEELAFFGLIPEIIGDCCYEE 95 (105)
T ss_dssp GTEEEE---CSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHHTCCSCCBCHHHHHH
T ss_pred CCcEEE---eCCcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 456666 6899999999999999999876534678999999999999874 345443
No 57
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=89.71 E-value=0.27 Score=44.56 Aligned_cols=57 Identities=9% Similarity=0.097 Sum_probs=45.3
Q ss_pred CccEEEEecCCCCHHHHHHHHhcccCCccccCccchHHHHHHhhchhhhhhhh--hhhhhhc
Q 007977 207 EQRYVTLRIHASEEAALMELLNFMYSSTLSTTTPTALLDVLMAADKFEVASCM--RYCSRLL 266 (582)
Q Consensus 207 ~~~~v~l~~~~v~~~~f~~lL~fiYTg~l~i~~~~~v~~ll~aAd~l~v~~L~--~~C~~~L 266 (582)
..+++-+ |=++..|+.+|+|+-+|++.+.....+..++.-|++|+|+.+. .+|.+-+
T Consensus 73 ~~g~yFi---DRdp~~F~~ILnflR~G~l~~p~~~~~~~l~eEa~fy~i~~l~l~~CC~~~~ 131 (140)
T 2nz0_B 73 DTKEYFF---DRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCCYEEY 131 (140)
T ss_dssp TTTEEEE---CSCHHHHHHHHHHHHHSSBCCCTTSCHHHHHHHHHHHTCCGGGBCTTTHHHH
T ss_pred CCCeEEE---eCCcHHHHHHHHHHhcCCcCCCCCcCHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 3456666 6899999999999999999876534688999999999999984 4454444
No 58
>1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A
Probab=85.57 E-value=0.26 Score=45.06 Aligned_cols=35 Identities=11% Similarity=0.263 Sum_probs=29.3
Q ss_pred hhhcccccchhhhcccCcceecccceeeeccccCCCC
Q 007977 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTED 100 (582)
Q Consensus 64 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (582)
+||+.+|++|++|++++ ++++|+.+|+|.+.+..|
T Consensus 124 ~~G~~~Fi~~~~L~~~~--yl~dD~l~I~~~V~v~~~ 158 (160)
T 1lb6_A 124 GFGYVTFMHLEALRQRT--FIKDDTLLVRCEVSTRFD 158 (160)
T ss_dssp EEEEEEEEEGGGGGTSC--CCBTTBEEEEEEEEC---
T ss_pred CcCEeeEeEHHHhhhCC--CccCCEEEEEEEEEEeec
Confidence 59999999999999766 899999999998876644
No 59
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=85.39 E-value=0.62 Score=39.70 Aligned_cols=54 Identities=11% Similarity=0.054 Sum_probs=43.3
Q ss_pred CccEEEEecCCCCHHHHHHHHhcccC-CccccCccchHHHHHHhhchhhhhhhh-hhhh
Q 007977 207 EQRYVTLRIHASEEAALMELLNFMYS-STLSTTTPTALLDVLMAADKFEVASCM-RYCS 263 (582)
Q Consensus 207 ~~~~v~l~~~~v~~~~f~~lL~fiYT-g~l~i~~~~~v~~ll~aAd~l~v~~L~-~~C~ 263 (582)
..+++-+ |-+|..|+.+|+|+-| |++.+.....+..++.-|++|+|+.+. +.|.
T Consensus 40 ~~~eyFi---DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea~fy~i~~~~~~~~~ 95 (100)
T 1t1d_A 40 LRNEYFF---DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEIKFYELGENAFERYR 95 (100)
T ss_dssp TTTEEEE---CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CceeEEE---cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHH
Confidence 3456666 6899999999999999 899876545678899999999998865 4443
No 60
>3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A
Probab=83.42 E-value=0.3 Score=43.77 Aligned_cols=37 Identities=19% Similarity=0.383 Sum_probs=29.5
Q ss_pred hhhhcccccchhhhcccCcceecccceeeeccccCCC
Q 007977 63 ADWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTE 99 (582)
Q Consensus 63 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (582)
.+||+.+|++|++|+.....++.+|+.+++|.+.+..
T Consensus 108 ~~wG~~~Fi~~~~L~~~~~~yl~dD~l~I~~~V~V~~ 144 (145)
T 3ivv_A 108 KDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQ 144 (145)
T ss_dssp CEEEEEEEEEHHHHHCGGGCSSGGGCEEEEEEEEECC
T ss_pred CCcCHHHeEEhhhhccccCCcEeCCEEEEEEEEEEEe
Confidence 3599999999999953222389999999999887654
No 61
>2ja4_A T-cell surface glycoprotein CD5; SRCR, membrane, polymorphism, crystallography, transmembrane, innate immunity, phosphorylation, immune system; 2.21A {Homo sapiens} PDB: 2ott_X
Probab=81.29 E-value=0.12 Score=44.23 Aligned_cols=35 Identities=9% Similarity=-0.160 Sum_probs=27.7
Q ss_pred CCCCcccccCC--ccccceeeEeeccCCCCCCCCCCC
Q 007977 24 DSDFGFAFNDS--NFSDRVLRIEIMPDLPDSKSDGDA 58 (582)
Q Consensus 24 ~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~ 58 (582)
-.|++|+.+++ +++||+|++..+.+++....+|.|
T Consensus 32 VCdd~w~~~~A~~~VvCrqLG~g~a~~~~~~~~fg~g 68 (101)
T 2ja4_A 32 LCDSSSARSSLRWEEVCREQQCGSVNSYRVLDAGDPT 68 (101)
T ss_dssp EECCCSSCCSHHHHHHHHHTTCCSEEEEEEESTTCTT
T ss_pred EECCCCChhHCcccEEEEecCCCchhhceeccccCCc
Confidence 34889999999 999999999877665555566654
No 62
>4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=80.99 E-value=0.5 Score=45.15 Aligned_cols=35 Identities=3% Similarity=-0.045 Sum_probs=30.8
Q ss_pred hhhcccccchhhhcccCcceecccceeeeccccCCCC
Q 007977 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTED 100 (582)
Q Consensus 64 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (582)
+||+.+|++|++|++++ ++++|+.+++|.+.+.+.
T Consensus 155 ~wG~~~Fi~~~~L~~~g--yL~dD~l~I~~~V~v~~~ 189 (198)
T 4ghu_A 155 ASGCPVFVAQTVLENGT--YIKDDTIFIKVIVDTSDL 189 (198)
T ss_dssp CEEEEEEEEHHHHHHTT--SCBTTBEEEEEEECCTTC
T ss_pred CcCchhEeEHHHhhhcC--CeeCCEEEEEEEEEeccC
Confidence 59999999999999866 899999999998876554
No 63
>1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A
Probab=75.86 E-value=0.88 Score=41.66 Aligned_cols=34 Identities=3% Similarity=-0.103 Sum_probs=29.2
Q ss_pred hhhcccccchhhhcccCcceecccceeeeccccCC
Q 007977 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDT 98 (582)
Q Consensus 64 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (582)
+||+.+|++|++|+++. .++++|+.+++|.+.++
T Consensus 133 ~~G~~~Fi~~~~L~~~~-gyl~dD~l~I~~~V~v~ 166 (168)
T 1d00_A 133 ASGCPLFCPVSKMEAKN-SYVRDDAIFIKAIVDLT 166 (168)
T ss_dssp CEEEEEEEETTTTTSSS-SSSBTTEEEEEEEECCT
T ss_pred CcCcceEeEHHHhcccC-CceeCCEEEEEEEEEec
Confidence 59999999999999862 48999999999987654
No 64
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=75.74 E-value=0.79 Score=43.32 Aligned_cols=33 Identities=3% Similarity=-0.035 Sum_probs=29.2
Q ss_pred hhhcccccchhhhcccCcceecccceeeeccccCC
Q 007977 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDT 98 (582)
Q Consensus 64 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (582)
+||+.+|++|++|++.+ ++++|+.+++|.+.++
T Consensus 155 ~wG~~~Fi~~~~L~~~g--yl~dD~l~I~~~V~v~ 187 (192)
T 2gkw_A 155 ASGCPVFVAQTVLENGT--YIKDDTIFIKVIVDTS 187 (192)
T ss_dssp CEEEEEEEEHHHHHHTT--SCBTTEEEEEEEECCT
T ss_pred CCChHHEeEHHHhCcCC--CeeCCEEEEEEEEEcC
Confidence 59999999999999875 8999999999988554
No 65
>1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A
Probab=73.04 E-value=1.1 Score=42.19 Aligned_cols=33 Identities=6% Similarity=-0.048 Sum_probs=28.8
Q ss_pred hhhcccccchhhhc-ccCcceecccceeeeccccCC
Q 007977 64 DWARNRKRRREEIK-KDTVDVLVQREQILQCNMPDT 98 (582)
Q Consensus 64 ~~~~~~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~ 98 (582)
+||+.+|++|++|+ +++ ++.+|+.+++|.+.++
T Consensus 157 ~wG~~~Fi~~~~L~~~~g--yl~dD~l~I~~~V~V~ 190 (192)
T 1ca9_A 157 ASGCPLFCPVSKMEAKNS--YVRDDAIFIKAIVDLT 190 (192)
T ss_dssp CEEEEEEEETHHHHSSCS--SCBTTEEEEEEEECCT
T ss_pred CcChhheeEHHHhhhccC--CEeCCEEEEEEEEEec
Confidence 59999999999999 554 8999999999987654
No 66
>4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus}
Probab=73.03 E-value=1.2 Score=41.55 Aligned_cols=34 Identities=6% Similarity=-0.008 Sum_probs=28.7
Q ss_pred hhhcccccchhhhcccCcceecccceeeeccccC
Q 007977 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPD 97 (582)
Q Consensus 64 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 97 (582)
+||+.+|++|++|++....++++|+.+++|.+..
T Consensus 139 ~wG~~~Fi~~~~L~~~~~~yL~dD~l~I~~~V~i 172 (178)
T 4gjh_A 139 ASGCPRFVSHSTLENSKNTYIKDDTLFLKVAVDL 172 (178)
T ss_dssp CEEEEEEEEHHHHHCTTCCSSBTTBEEEEEEECC
T ss_pred CcChhheeEHHHhhccccCcCcCCEEEEEEEEEe
Confidence 5999999999999973334899999999998743
No 67
>1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A
Probab=72.19 E-value=1.3 Score=43.12 Aligned_cols=34 Identities=3% Similarity=-0.007 Sum_probs=29.9
Q ss_pred hhhcccccchhhhcccCcceecccceeeeccccCCC
Q 007977 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPDTE 99 (582)
Q Consensus 64 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (582)
+||+.+|++|++|++++ ++++|+.+++|.+.+++
T Consensus 191 ~wG~~~Fi~~~~L~~~g--yL~dD~l~I~~~V~v~~ 224 (228)
T 1flk_A 191 ASGCPVFVAQTVLENGT--YIKDDTIFIKVIVDTSD 224 (228)
T ss_dssp CCSEEEEEEHHHHSSST--TCCSSEEEEEEECCCTT
T ss_pred CcCHHHeeEHHHHccCC--CccCCEEEEEEEEEccc
Confidence 59999999999999865 89999999999886653
No 68
>2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A
Probab=66.23 E-value=1.7 Score=39.07 Aligned_cols=34 Identities=9% Similarity=0.166 Sum_probs=28.4
Q ss_pred hhhcccccchhhhcccCcceecccceeeeccccC
Q 007977 64 DWARNRKRRREEIKKDTVDVLVQREQILQCNMPD 97 (582)
Q Consensus 64 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 97 (582)
+||+.+|+++++|+..+..++.+|+.+++|.+.+
T Consensus 114 ~wG~~~Fi~~~~L~~~~~~yl~dD~l~Ie~~V~V 147 (155)
T 2foj_A 114 DWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQA 147 (155)
T ss_dssp EEEEEEEEEHHHHTCTTTSSCBTTBEEEEEEEEE
T ss_pred CEeECCeEEHHHhcCcCCCceECCEEEEEEEEEE
Confidence 5999999999999743334899999999998765
No 69
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.16 E-value=5.5 Score=33.58 Aligned_cols=33 Identities=12% Similarity=0.097 Sum_probs=29.6
Q ss_pred cccCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 235 LSTTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 235 l~i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
-.++. +|...++..|+.|+++.|.+.|.+|+.+
T Consensus 6 ~~L~~-~NCl~i~~~A~~~~~~~L~~~a~~fi~~ 38 (105)
T 2eqx_A 6 SGVQV-GNCLQVMWLADRHSDPELYTAAKHCAKT 38 (105)
T ss_dssp CCCCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 34666 8999999999999999999999999875
No 70
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=54.07 E-value=6.3 Score=32.70 Aligned_cols=34 Identities=18% Similarity=0.260 Sum_probs=30.2
Q ss_pred cCCccchhhhccccchhhhhhhhhhHHHHHHHHHHHhh
Q 007977 270 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARY 307 (582)
Q Consensus 270 ~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~f 307 (582)
.++.+|+..++.+|+.| .++.|++.|.+|+.+++
T Consensus 76 ~~~~~~~~~ll~~A~~~----~~~~L~~~c~~~l~~~l 109 (109)
T 2vkp_A 76 DLEADTVLATLYAAKKY----IVPALAKACVNFLETSL 109 (109)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHhhC
Confidence 57889999999999998 78999999999998763
No 71
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=52.53 E-value=12 Score=36.88 Aligned_cols=95 Identities=8% Similarity=0.108 Sum_probs=62.4
Q ss_pred cCccchHHHHHHhhchhhhhhhhhhhhhhcccC-----------cCCccchhhhccccchhhhhhhhhhHHHHHHHHHHH
Q 007977 237 TTTPTALLDVLMAADKFEVASCMRYCSRLLRNL-----------PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAA 305 (582)
Q Consensus 237 i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~l-----------~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~ 305 (582)
++. +|+..++..|+.|+++.|.+.|.+++..- .++.+....++.--... ...-..+.+++.+|+..
T Consensus 139 l~~-~n~~~i~~~A~~~~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~--v~sE~~vf~av~~W~~~ 215 (279)
T 3i3n_A 139 LHL-SNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEIT--VDSEEVLFETVLKWVQR 215 (279)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTCSSCC--CSCHHHHHHHHHHHHHT
T ss_pred CCc-chHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcCcCCC--CCCHHHHHHHHHHHHHc
Confidence 566 89999999999999999999999988641 22333333333211110 00134678888999874
Q ss_pred h-------hhhhhhhhHhhcCCCHHHHHHHhcCCCcc
Q 007977 306 R-------YKDISKFQEEVLNLPLAGIEAVLASDDLQ 335 (582)
Q Consensus 306 ~-------f~~v~~~~~~f~~L~~~~l~~lL~sd~L~ 335 (582)
+ +..+.+ .=-|..|+.+.+..++..+.+-
T Consensus 216 ~~~~r~~~~~~ll~-~VRf~l~~~~~L~~~v~~~~l~ 251 (279)
T 3i3n_A 216 NAEERERYFEELFK-LLRLSQMKPTYLTRHVKPERLV 251 (279)
T ss_dssp THHHHTTTHHHHHT-TSCGGGSCHHHHHHTTTTSHHH
T ss_pred CHHHHHHHHHHHHH-hcCCCCCCHHHHHHHhhccchh
Confidence 4 334444 4457778899988888776654
No 72
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=38.77 E-value=1.4e+02 Score=29.01 Aligned_cols=68 Identities=9% Similarity=-0.053 Sum_probs=43.1
Q ss_pred eeEEEeecC---ceEEeeeCccCeEEE---ccccccceeEEeeCCeeeceeEEEccc---ccccCccCC-----ccCCCC
Q 007977 431 ERAYKYRPV---KVVEFELPRQQCVVY---LDLKREECAHLFPAGRIYSQAFHLGGQ---GFFLSAHCN-----MDQQSS 496 (582)
Q Consensus 431 ~~l~v~~~~---~~ve~ydP~~~~W~~---L~~~R~~~~vavl~g~IYn~iYviGG~---g~~~dp~~n-----M~~~R~ 496 (582)
+.+|...+. +.+..+|+.+++-.. ++..-.+.+++..+++|| ++..+ ++.+|+.+- .+.+..
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly----~ltw~~~~v~v~D~~tl~~~~ti~~~~~ 106 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLI----QLTWRNHEGFVYDLATLTPRARFRYPGE 106 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEE----EEESSSSEEEEEETTTTEEEEEEECSSC
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEE----EEEeeCCEEEEEECCcCcEEEEEeCCCC
Confidence 356665554 488999999988766 444445567788886655 77655 455677553 333444
Q ss_pred ceEEEE
Q 007977 497 FHCFGL 502 (582)
Q Consensus 497 ~~~~~v 502 (582)
..+++.
T Consensus 107 Gwglt~ 112 (243)
T 3mbr_X 107 GWALTS 112 (243)
T ss_dssp CCEEEE
T ss_pred ceEEee
Confidence 556653
No 73
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=37.75 E-value=14 Score=33.20 Aligned_cols=31 Identities=10% Similarity=0.128 Sum_probs=28.4
Q ss_pred cCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 237 TTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 237 i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
++. +|+..++..|+.|+++.|++.|.+|+.+
T Consensus 132 l~~-~n~~~~~~~A~~~~~~~L~~~~~~~i~~ 162 (172)
T 3htm_A 132 LSV-ENAAEILILADLHSADQLKTQAVDFINY 162 (172)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCH-HHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 455 8999999999999999999999999976
No 74
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=34.11 E-value=9 Score=33.53 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=31.0
Q ss_pred cCCccchhhhccccchhhhhhhhhhHHHHHHHHHHHhhh
Q 007977 270 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYK 308 (582)
Q Consensus 270 ~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~f~ 308 (582)
.++.+|+..++.+|+.| .+..|++.|.+||..++.
T Consensus 100 ~i~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~l~ 134 (138)
T 2z8h_A 100 ILSKDNVDEVCRCVEFL----SVHNIEESCFQFLKFKFL 134 (138)
T ss_dssp CCCTTTHHHHHHHHHHH----TCGGGHHHHHHHTTCCCS
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHhcc
Confidence 57889999999999998 679999999999987764
No 75
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=33.35 E-value=18 Score=30.92 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=29.1
Q ss_pred cCCccchhhhccccchhhhhhhhhhHHHHHHHHHHHh
Q 007977 270 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 306 (582)
Q Consensus 270 ~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~ 306 (582)
.++.+|+..++.+|+.| .++.|++.|.+||.++
T Consensus 94 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 126 (127)
T 1r29_A 94 NLREGNIMAVMATAMYL----QMEHVVDTCRKFIKAS 126 (127)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHh----CCHHHHHHHHHHHHhc
Confidence 57889999999999998 6799999999999754
No 76
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=30.49 E-value=38 Score=36.70 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=41.1
Q ss_pred CccEEEEecCCCCHHHHHHHHhcccC-CccccCccchHHHHHHhhchhhhhhhh
Q 007977 207 EQRYVTLRIHASEEAALMELLNFMYS-STLSTTTPTALLDVLMAADKFEVASCM 259 (582)
Q Consensus 207 ~~~~v~l~~~~v~~~~f~~lL~fiYT-g~l~i~~~~~v~~ll~aAd~l~v~~L~ 259 (582)
..+++-+ |=+|..|+.+|+|+.| |++.....-....++.-|++|+++++.
T Consensus 91 ~~~~~f~---DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 91 LRNEYFF---DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEA 141 (514)
T ss_dssp TTTEEEE---CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHHHHHTTCCHHH
T ss_pred CCCCEEE---cCChHHHHHHHHHHhcCCccccCCcccHHHHHHHHHhcCCCHHH
Confidence 3456666 6899999999999999 999876534567788999999998876
No 77
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=29.69 E-value=11 Score=32.97 Aligned_cols=38 Identities=11% Similarity=0.048 Sum_probs=28.4
Q ss_pred cCCccchhhhccccchhhhhhhhhhHHHHHHHHHHHhhhhhh
Q 007977 270 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDIS 311 (582)
Q Consensus 270 ~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~f~~v~ 311 (582)
.++.+|+..++..|+.| .+..|++.|.+|+.+++..-.
T Consensus 86 ~i~~~~v~~ll~~A~~l----~i~~L~~~C~~~l~~~l~~~~ 123 (135)
T 2yy9_A 86 ALTSGNRDQVLLAAKEL----RVPEAVELCQSFQPQTSVGQA 123 (135)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCCC-------
T ss_pred CCCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHhccCCC
Confidence 57889999999999998 679999999999988876543
No 78
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=28.20 E-value=41 Score=32.28 Aligned_cols=92 Identities=13% Similarity=0.133 Sum_probs=56.7
Q ss_pred cCCccchhhhccccchhhhhhhhhhHHHHHHHHHHHhhhhhhhhhHhhcCCCHHHHHHHhcCCCccccchhhHHHHHHHH
Q 007977 270 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAARYKDISKFQEEVLNLPLAGIEAVLASDDLQIASEDAVYDFALKW 349 (582)
Q Consensus 270 ~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~f~~v~~~~~~f~~L~~~~l~~lL~sd~L~V~sE~~Vf~aVl~W 349 (582)
.++.+|+..++..|..| .++.|++.|.+|+..++..- + .-+... +... .+-.++.+.+..+
T Consensus 98 ~i~~~~v~~ll~~A~~l----~i~~l~~~c~~~L~~~l~~~-n-~~~i~~-----~A~~--------~~~~~L~~~~~~~ 158 (256)
T 3hve_A 98 RLNEDTIQDVVQAADLL----LLTDLKTLCCEFLEGCIAAE-N-CIGIRD-----FALH--------YCLHHVHYLATEY 158 (256)
T ss_dssp CCC-CCHHHHHHHHHHH----TCHHHHHHHHHHHHHTCCSS-T-THHHHH-----HHHH--------TTCHHHHHHHHHH
T ss_pred cccHhHHHHHHHHHHHH----ChHHHHHHHHHHHHhhCCHh-h-HHHHHH-----HHHH--------cCcHHHHHHHHHH
Confidence 57889999999999988 67999999999998764321 1 000000 0000 1233566677777
Q ss_pred HhhcCCChhhHHhhhcccccccccCCCCCHHHHhhhcccCCC
Q 007977 350 ARTHYPKLEERREILGSRLGRLIRFPYMTCRKLKKVLTCNDF 391 (582)
Q Consensus 350 i~~d~~~~~~R~~~l~~~LL~~VRfplls~~~L~~~v~~~~l 391 (582)
+..+ + .++.+.=-|..++.+.|.+++.++.+
T Consensus 159 i~~~----------f-~~v~~~~~f~~L~~~~l~~lL~~d~L 189 (256)
T 3hve_A 159 LETH----------F-RDVSSTEEFLELSPQKLKEVISLEKL 189 (256)
T ss_dssp HHHH----------H-HHHTTCHHHHSSCHHHHHHHHHCC--
T ss_pred HHHH----------H-HHHhCCcchhcCCHHHHHHHHccCCC
Confidence 7665 1 23333335667788888888877666
No 79
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=27.07 E-value=34 Score=28.91 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=29.0
Q ss_pred cCCccchhhhccccchhhhhhhhhhHHHHHHHHHHHh
Q 007977 270 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 306 (582)
Q Consensus 270 ~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~ 306 (582)
.++.+|+..++.+|+.| .++.|++.|.+|+.+.
T Consensus 88 ~~~~~~~~~ll~~A~~~----~i~~L~~~c~~~l~~~ 120 (121)
T 1buo_A 88 QAKAEDLDDLLYAAEIL----EIEYLEEQCLKMLETI 120 (121)
T ss_dssp CCCGGGHHHHHHHHHHH----TCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHh
Confidence 57889999999999998 6799999999998753
No 80
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=26.55 E-value=25 Score=34.88 Aligned_cols=31 Identities=10% Similarity=0.128 Sum_probs=28.4
Q ss_pred cCccchHHHHHHhhchhhhhhhhhhhhhhccc
Q 007977 237 TTTPTALLDVLMAADKFEVASCMRYCSRLLRN 268 (582)
Q Consensus 237 i~~~~~v~~ll~aAd~l~v~~L~~~C~~~L~~ 268 (582)
++. +++..++..|++|+++.|++.|.+|+..
T Consensus 272 ~~~-~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 302 (312)
T 3hqi_A 272 LSV-ENAAEILILADLHSADQLKTQAVDFINY 302 (312)
T ss_dssp CCT-TTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCH-HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 455 8999999999999999999999999976
No 81
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=26.15 E-value=29 Score=29.30 Aligned_cols=31 Identities=10% Similarity=0.126 Sum_probs=27.7
Q ss_pred cCCccchhhhccccchhhhhhhhhhHHHHHHHHHH
Q 007977 270 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 304 (582)
Q Consensus 270 ~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~ 304 (582)
.++.+|+..++..|+.+ .++.|++.|.+|+.
T Consensus 87 ~i~~~~~~~ll~~A~~l----~i~~L~~~C~~~l~ 117 (119)
T 2q81_A 87 SLSPENVDDVLAVATFL----QMQDIITACHALKS 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57889999999999998 67999999999984
No 82
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=25.29 E-value=18 Score=30.68 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=27.2
Q ss_pred cCCccchhhhccccchhhhhhhhhhHHHHHHHHHHHh
Q 007977 270 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLAAR 306 (582)
Q Consensus 270 ~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~~~ 306 (582)
.++.+|+..++..|+.| .++.|++.|.+|+.++
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~~~ 117 (119)
T 3b84_A 85 ALTSGNRDQVLLAAREL----RVPEAVELCQSFKPKT 117 (119)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHCC---
T ss_pred ccCHHHHHHHHHHHHHh----CcHHHHHHHHHHHHHc
Confidence 57889999999999998 6799999999998764
No 83
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=24.32 E-value=33 Score=28.64 Aligned_cols=31 Identities=6% Similarity=-0.008 Sum_probs=27.6
Q ss_pred cCCccchhhhccccchhhhhhhhhhHHHHHHHHHH
Q 007977 270 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFLA 304 (582)
Q Consensus 270 ~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi~ 304 (582)
.++.+|+..++.+|+.| .++.|++.|.+|+.
T Consensus 85 ~~~~~~v~~ll~~A~~~----~i~~L~~~C~~~l~ 115 (116)
T 2vpk_A 85 NLDSWNVKEIHQAADYL----KVEEVVTKCKIKME 115 (116)
T ss_dssp CCCTTTHHHHHHHHHHT----TCHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHHh
Confidence 57889999999999998 67999999999974
No 84
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=22.36 E-value=40 Score=28.19 Aligned_cols=30 Identities=7% Similarity=0.131 Sum_probs=26.8
Q ss_pred cCCccchhhhccccchhhhhhhhhhHHHHHHHHH
Q 007977 270 PMTCESALLYLDLPSSVLMADAVQPLTDTAKQFL 303 (582)
Q Consensus 270 ~l~~~n~~~~l~la~~~~~~~~~~~L~~~~~~fi 303 (582)
.++.+|+..++.+|+.| .++.|++.|.+|+
T Consensus 90 ~~~~~~~~~ll~~A~~~----~i~~L~~~C~~~L 119 (120)
T 2if5_A 90 TVSTANVGDILSAARLL----EIPAVSHVCADLL 119 (120)
T ss_dssp CCCGGGHHHHHHHHHHT----TCHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHh----CCHHHHHHHHHHh
Confidence 57789999999999998 6799999999987
Done!