Query 007981
Match_columns 582
No_of_seqs 162 out of 1495
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 17:54:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007981.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007981hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK12849 groEL chaperonin GroE 100.0 5E-112 1E-116 939.0 60.1 521 50-573 2-529 (542)
2 PRK00013 groEL chaperonin GroE 100.0 2E-111 4E-116 934.6 59.2 527 50-579 2-536 (542)
3 PLN03167 Chaperonin-60 beta su 100.0 2E-111 4E-116 940.0 58.1 526 45-572 51-586 (600)
4 PRK12851 groEL chaperonin GroE 100.0 6E-111 1E-115 931.1 59.3 529 49-580 2-537 (541)
5 PRK12850 groEL chaperonin GroE 100.0 1E-110 2E-115 929.7 58.9 521 49-572 2-529 (544)
6 PTZ00114 Heat shock protein 60 100.0 2E-110 3E-115 930.8 59.5 523 47-571 11-544 (555)
7 PRK12852 groEL chaperonin GroE 100.0 5E-110 1E-114 925.6 59.0 520 49-571 2-529 (545)
8 TIGR02348 GroEL chaperonin Gro 100.0 1E-109 3E-114 918.4 58.4 515 51-568 2-523 (524)
9 CHL00093 groEL chaperonin GroE 100.0 2E-109 4E-114 918.1 57.8 517 50-569 2-527 (529)
10 PRK14104 chaperonin GroEL; Pro 100.0 7E-109 1E-113 914.5 58.0 519 50-571 3-529 (546)
11 cd03344 GroEL GroEL_like type 100.0 7E-109 2E-113 911.1 57.3 512 51-564 1-519 (520)
12 KOG0356 Mitochondrial chaperon 100.0 6E-100 1E-104 798.8 41.3 520 49-572 15-542 (550)
13 cd03339 TCP1_epsilon TCP-1 (CT 100.0 7.5E-93 1.6E-97 787.8 48.2 469 36-563 1-525 (526)
14 TIGR02347 chap_CCT_zeta T-comp 100.0 1.8E-92 4E-97 783.0 50.5 460 51-570 9-529 (531)
15 TIGR02343 chap_CCT_epsi T-comp 100.0 2E-92 4.3E-97 784.0 50.5 473 34-565 3-531 (532)
16 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 5.9E-93 1.3E-97 780.4 45.8 451 51-566 5-483 (484)
17 TIGR02339 thermosome_arch ther 100.0 6.7E-92 1.4E-96 779.4 50.6 456 50-564 8-518 (519)
18 cd03343 cpn60 cpn60 chaperonin 100.0 8.1E-92 1.8E-96 779.1 50.1 456 51-565 8-516 (517)
19 cd03335 TCP1_alpha TCP-1 (CTT 100.0 6.9E-92 1.5E-96 780.2 48.6 456 53-568 3-527 (527)
20 cd03338 TCP1_delta TCP-1 (CTT 100.0 1.8E-91 4E-96 775.6 48.2 461 52-564 2-514 (515)
21 COG0459 GroL Chaperonin GroEL 100.0 5.8E-93 1.3E-97 778.0 35.0 497 49-571 2-518 (524)
22 TIGR02340 chap_CCT_alpha T-com 100.0 4.8E-91 1E-95 774.5 49.3 458 52-569 6-532 (536)
23 TIGR02344 chap_CCT_gamma T-com 100.0 7.5E-91 1.6E-95 772.0 49.6 459 51-569 9-524 (525)
24 TIGR02345 chap_CCT_eta T-compl 100.0 7.1E-91 1.5E-95 770.9 49.0 459 51-566 11-520 (522)
25 TIGR02342 chap_CCT_delta T-com 100.0 6.2E-91 1.3E-95 770.6 47.6 463 51-565 2-516 (517)
26 cd03336 TCP1_beta TCP-1 (CTT o 100.0 2.6E-90 5.6E-95 765.6 51.5 457 52-569 7-516 (517)
27 cd03340 TCP1_eta TCP-1 (CTT or 100.0 1.9E-90 4.1E-95 768.3 49.8 459 52-566 10-520 (522)
28 PTZ00212 T-complex protein 1 s 100.0 6.1E-90 1.3E-94 764.7 51.4 459 51-570 15-529 (533)
29 TIGR02346 chap_CCT_theta T-com 100.0 1.3E-89 2.8E-94 761.4 49.9 456 53-569 12-522 (531)
30 TIGR02341 chap_CCT_beta T-comp 100.0 9.7E-89 2.1E-93 752.4 52.2 457 52-569 8-517 (519)
31 cd03337 TCP1_gamma TCP-1 (CTT 100.0 2.2E-89 4.8E-94 751.8 45.9 438 51-564 9-479 (480)
32 cd00309 chaperonin_type_I_II c 100.0 4.1E-87 8.8E-92 732.7 48.7 437 52-564 2-464 (464)
33 cd03341 TCP1_theta TCP-1 (CTT 100.0 4.3E-87 9.4E-92 732.3 46.7 437 55-565 5-471 (472)
34 KOG0361 Chaperonin complex com 100.0 7.1E-88 1.5E-92 677.1 33.8 461 50-566 12-523 (543)
35 KOG0358 Chaperonin complex com 100.0 2.3E-83 5E-88 643.5 30.4 463 50-565 18-533 (534)
36 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 2.5E-80 5.3E-85 682.6 45.2 439 70-568 1-485 (485)
37 KOG0363 Chaperonin complex com 100.0 2.6E-79 5.7E-84 611.7 33.5 461 52-573 12-525 (527)
38 KOG0357 Chaperonin complex com 100.0 2.2E-77 4.8E-82 593.6 18.5 380 34-566 4-396 (400)
39 KOG0362 Chaperonin complex com 100.0 4.9E-71 1.1E-75 572.2 40.7 452 57-569 25-523 (537)
40 KOG0360 Chaperonin complex com 100.0 1.7E-71 3.7E-76 571.9 29.3 460 52-572 13-541 (545)
41 KOG0364 Chaperonin complex com 100.0 1.7E-70 3.8E-75 559.6 23.0 458 50-566 11-521 (527)
42 KOG0359 Chaperonin complex com 100.0 4.5E-66 9.7E-71 526.7 24.6 449 58-566 17-515 (520)
43 cd03333 chaperonin_like chaper 100.0 5E-28 1.1E-32 238.3 20.0 191 188-449 2-209 (209)
44 cd03334 Fab1_TCP TCP-1 like do 99.9 4E-26 8.7E-31 231.9 19.8 196 201-450 20-254 (261)
45 KOG0230 Phosphatidylinositol-4 99.2 9.8E-11 2.1E-15 136.7 13.4 205 201-459 334-577 (1598)
46 COG0459 GroL Chaperonin GroEL 96.8 0.0015 3.3E-08 73.0 5.9 87 280-377 260-354 (524)
47 smart00574 POX domain associat 33.5 1.4E+02 0.0031 27.6 6.4 60 398-470 68-128 (140)
48 TIGR02345 chap_CCT_eta T-compl 30.7 28 0.00061 39.2 1.9 53 290-343 247-308 (522)
49 KOG1593 Asparaginase [Amino ac 26.4 1.1E+02 0.0023 31.4 4.7 58 432-501 104-164 (349)
50 COG4148 ModC ABC-type molybdat 21.1 95 0.0021 32.4 3.3 43 261-303 144-192 (352)
No 1
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=4.7e-112 Score=938.98 Aligned_cols=521 Identities=50% Similarity=0.777 Sum_probs=503.8
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
.|.+.||.+++..+++|++.++++++|||||+||+|||++ .|+++|||||+||+++|+++||.+|++|+|++++|++||
T Consensus 2 ~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDGaTIlk~i~~~hp~~~~~a~ll~~~a~~qd 81 (542)
T PRK12849 2 AKIIKFDEEARRALERGVNKLADAVKVTLGPKGRNVVIDKSFGAPTITKDGVSIAKEIELEDPFENLGAQLVKEVASKTN 81 (542)
T ss_pred CccccchHHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCccHhHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~li 208 (582)
+++||||||+|+||++||+++.+++++|+||..|++||++|++.+++.|+++++|+++.++|.++|+||+++++.+++++
T Consensus 82 ~e~GDGTTtvviLageLL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~lv 161 (542)
T PRK12849 82 DVAGDGTTTATVLAQALVQEGLKNVAAGANPMDLKRGIDKAVEAVVEELKALARPVSGSEEIAQVATISANGDEEIGELI 161 (542)
T ss_pred CccCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred HHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHhc
Q 007981 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQ 288 (582)
Q Consensus 209 ~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~~ 288 (582)
++|+..+++++.|.++.|++++|++++++|++|+++|.||+|.++.++|+++++||+|+++|+.|++++++.++++++.+
T Consensus 162 ~~Av~~v~~~g~i~i~~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~~~~~l~~i~~ 241 (542)
T PRK12849 162 AEAMEKVGKDGVITVEESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEAVLEDPLILLTDKKISSLQDLLPLLEKVAQ 241 (542)
T ss_pred HHHHHHhccCCcEeEEeCCCcceeEEEEEeEEEecCcccCcccccccCceEEeeCcEEEeecCCcCCHHHHHHHHHHHHH
Confidence 99999999889889999999998669999999999999999999888899999999999999999999999999999999
Q ss_pred CCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc-----cccCCCccccceeeE
Q 007981 289 LSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL-----TLAGATSDQLGIARK 362 (582)
Q Consensus 289 ~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~-----~l~~l~~~~lG~~~~ 362 (582)
+|+||||++++|+++|+++|..|+++|.++|+|||+|++++.++++|+|||.+|| .+++ +++++++++||+|+.
T Consensus 242 ~~~~lvI~~~~I~~~al~~l~~~~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tGa~~v~~~~~~~~~~~~~~~LG~~~~ 321 (542)
T PRK12849 242 SGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGLKLEEVTLDDLGRAKR 321 (542)
T ss_pred hCCCEEEECCCCcHHHHHHHHHhhhhccccEEEEeCCCccchhHhHHHHHHHHhCCEEecccccCCcccCCHHHCceeeE
Confidence 9999999999999999999999999999999999999999999999999999999 6666 689999999999999
Q ss_pred EEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHH
Q 007981 363 VTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNA 442 (582)
Q Consensus 363 v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~ 442 (582)
|+++++++++++++++++.+..|+++++++++++.+.|++++|+||+++|+++.+||+|||+|+.+++|++|+++||+|+
T Consensus 322 v~~~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~er~i~DAl~~ 401 (542)
T PRK12849 322 VTITKDNTTIVDGAGDKEAIEARVAQIRRQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVELKERKDRVEDALNA 401 (542)
T ss_pred EEEeeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcCCCcceeec
Q 007981 443 TFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYNA 522 (582)
Q Consensus 443 ~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~Gid~ 522 (582)
+|+++++|+|||||++|+++|.+|.+++ +.++.+ ++++++|++||+.||++||+|||+|+.+++++|++.++++|||+
T Consensus 402 ~~~a~~~g~VpGGGa~e~~ls~~L~~~~-~~~g~~-~~~i~~~a~Al~~ip~~La~NaG~d~~~vi~~L~~~~~~~G~d~ 479 (542)
T PRK12849 402 TRAAVEEGIVPGGGVALLRAAKALDELA-GLNGDQ-AAGVEIVRRALEAPLRQIAENAGLDGSVVVAKVLELEDGFGFNA 479 (542)
T ss_pred HHHHHHcCeecCCCHHHHHHHHHHHHhh-CCChHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhhCCCcceeC
Confidence 9999999999999999999999999988 666654 69999999999999999999999999999999998778899999
Q ss_pred CCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCCC
Q 007981 523 MTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPA 573 (582)
Q Consensus 523 ~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~~ 573 (582)
.+|++.||++.|||||+.+|.++|+.|+++|++||++|++|+.+ |+...|
T Consensus 480 ~~g~~~d~~~~GV~Dp~~vk~~al~~A~e~A~~iL~id~iI~~~-~~~~~~ 529 (542)
T PRK12849 480 ATGEYGDLIAAGIIDPVKVTRSALQNAASVAGLLLTTEALVADK-PEEEDP 529 (542)
T ss_pred CCCccccHHhccCccCHHHHHHHHHHHHHHHHHHHhHHHHHhcC-CccCCC
Confidence 99999999999999999999999999999999999999999998 865444
No 2
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.6e-111 Score=934.64 Aligned_cols=527 Identities=51% Similarity=0.784 Sum_probs=501.3
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
.|++.||.+++..|++|++.++++++|||||+||+|||++ .|+++|||||+||||+|+++||.+|+||+|++++|++||
T Consensus 2 ~~~~~~~~~a~~~~i~a~~~ia~~v~ttLGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~e~a~~qd 81 (542)
T PRK00013 2 AKDIKFGEDARRKLLRGVNKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDPFENMGAQLVKEVASKTN 81 (542)
T ss_pred CchhhchHHHHHHHHHHHHHHHHHhhccCCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCchhhHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~li 208 (582)
+++||||||+|+|+++||+++.+++++|+||..|++||+.|.+.++++|+++++|+++.++|.++|+||+++++.+++++
T Consensus 82 ~e~GDGTTtvviLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~~~~~~~l~~va~ts~~~~~~ls~lv 161 (542)
T PRK00013 82 DVAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAAVEELKKISKPVEDKEEIAQVATISANGDEEIGKLI 161 (542)
T ss_pred cccCCccchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred HHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHhc
Q 007981 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQ 288 (582)
Q Consensus 209 ~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~~ 288 (582)
++|+..++++|.|.++.+....+.+++++|++|+++|.||||.+++++|+++++||+|+++|++|++++++.++++++.+
T Consensus 162 ~~Av~~v~~~g~i~i~~~~~~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ilv~d~~i~~~~~l~~~l~~i~~ 241 (542)
T PRK00013 162 AEAMEKVGKEGVITVEESKGFETELEVVEGMQFDRGYLSPYFVTDPEKMEAELENPYILITDKKISNIQDLLPVLEQVAQ 241 (542)
T ss_pred HHHHHHhCcCCcEEEEEcCCCCceEEEEEeEEecCCcccccccccccCCeEEEecCEEEEEcCccCCHHHHHHHHHHHHH
Confidence 99999999888888865544444449999999999999999999888899999999999999999999999999999999
Q ss_pred CCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc-----cccCCCccccceeeE
Q 007981 289 LSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL-----TLAGATSDQLGIARK 362 (582)
Q Consensus 289 ~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~-----~l~~l~~~~lG~~~~ 362 (582)
+|+||||++++|+++|+++|..|+++|+++|+|||+|+|++.++++|+|||++|| .++. +++++++++||+|+.
T Consensus 242 ~g~~lvi~~~~I~~~al~~l~~~~~~g~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~ 321 (542)
T PRK00013 242 SGKPLLIIAEDVEGEALATLVVNKLRGTLKVVAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDATLEDLGQAKK 321 (542)
T ss_pred hCCCEEEECCCCcHHHHHHHHHcCCcccceEEEEecCCcccchhhhHHHHHHHcCCEEecccccCCcccCCHHHCCeeeE
Confidence 9999999999999999999999999999999999999999999999999999999 6666 799999999999999
Q ss_pred EEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHH
Q 007981 363 VTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNA 442 (582)
Q Consensus 363 v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~ 442 (582)
|+++++++++|+++++++.+..|+++|+.+++++.+.|++++|+||+++|+|+++||+|||+|+.+++|++|+++||+|+
T Consensus 322 v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~g~~~tI~irG~t~~~l~E~er~i~Dal~~ 401 (542)
T PRK00013 322 VVVTKDNTTIVDGAGDKEAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHA 401 (542)
T ss_pred EEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC-CCcceee
Q 007981 443 TFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS-DWRFGYN 521 (582)
Q Consensus 443 ~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~-~~~~Gid 521 (582)
+|+++++|+|||||++|++|+++|+++ .+.++. +++++++|++||+.||++||+|||+|+.+++++|++. ++++|||
T Consensus 402 vk~al~~g~VpGGGa~e~~~s~~L~~~-~~~~~~-~~~~i~~~a~Al~~ip~~La~NaG~d~~~vl~~l~~~~~~~~G~d 479 (542)
T PRK00013 402 TRAAVEEGIVPGGGVALLRAAPALEAL-KGLNGD-EATGINIVLRALEAPLRQIAENAGLEGSVVVEKVKNGKGKGYGYN 479 (542)
T ss_pred HHHHHHcCcccCcHHHHHHHHHHHHHh-cCCChH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCEeEe
Confidence 999999999999999999999999988 556665 4699999999999999999999999999999999874 5679999
Q ss_pred cCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCCCCCCCCC
Q 007981 522 AMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPAVPQVPG 579 (582)
Q Consensus 522 ~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~~~~~~~~ 579 (582)
+.+|++.||++.|||||+.||.++|+.|+++|++||++|++|+.+ |++++.-|.|-|
T Consensus 480 ~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~iI~~~-~~~~~~~~~~~~ 536 (542)
T PRK00013 480 AATGEYVDMIEAGIIDPTKVTRSALQNAASVAGLLLTTEAVVADK-PEKKAAAPPMGG 536 (542)
T ss_pred CCCCceeehhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcccCCCCCCCC
Confidence 999999999999999999999999999999999999999999998 876554444443
No 3
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=2e-111 Score=940.03 Aligned_cols=526 Identities=48% Similarity=0.772 Sum_probs=506.2
Q ss_pred HhhcccchhcccH--HHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHH
Q 007981 45 VVRAGPKKILFGK--ESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQ 121 (582)
Q Consensus 45 ~~~~~~~~~~~g~--~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~ 121 (582)
++..++|++.||. ++|+.+++||..|+++|++||||+||+|||++ .|+++|||||+||+|+|+++||++|+||+|++
T Consensus 51 ~~~~~~k~~~~~~~~~ar~~l~~g~~~la~~vktTLGP~G~~kmi~~~~G~~~ITnDG~TIlk~i~~~hP~~~~gakll~ 130 (600)
T PLN03167 51 PKVKAAKELHFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVR 130 (600)
T ss_pred chhhhcceeecCCcHHHHHHHHHHHHHHHHHHhccCCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCchhhHHHHHHH
Confidence 4456789999999 79999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHhhhhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCc
Q 007981 122 EVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGND 201 (582)
Q Consensus 122 ~~a~~qd~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~ 201 (582)
++|++||+++||||||++|||++||+++.++++.|+||..|++||++|++.+++.|++++.|+++ ++|.++|++|++++
T Consensus 131 ~~a~~qd~evGDGTTTvvVLa~~LL~ea~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~s~~v~d-~~L~~vA~tS~~~~ 209 (600)
T PLN03167 131 QAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVKELKKMSKEVED-SELADVAAVSAGNN 209 (600)
T ss_pred HHHHhhhhhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCH-HHHHHHHHHhccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999976 67999999999999
Q ss_pred hhHHHHHHHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHH
Q 007981 202 EFIGNLIADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVP 281 (582)
Q Consensus 202 ~~l~~li~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~ 281 (582)
+.|++|+++|+.+++++|.|.+++|++++|++++++|++|+++|.||||++++++|+++++||+|+++|++|++++++.+
T Consensus 210 ~~i~~liaeAv~~Vg~~g~i~v~~g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~~l~np~Ill~d~~i~~~~~l~~ 289 (600)
T PLN03167 210 YEVGNMIAEAMSKVGRKGVVTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKITNARDLIG 289 (600)
T ss_pred HHHHHHHHHHHHHhccCCcEEeccCCCccceeEEEEEEEecCCccCcccccCcCCCeEEEeCCEEEEEccccCCHHHHHH
Confidence 99999999999999998999999999999998999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc-----cccCCCcc
Q 007981 282 LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL-----TLAGATSD 355 (582)
Q Consensus 282 ~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~-----~l~~l~~~ 355 (582)
+++.+.+.|+||||++++|+++++++|+.|+++|..+++|||+|+||+.++++|+|||++|| .++. ++++++++
T Consensus 290 ~le~i~~~g~~lvI~a~~I~~~aL~~L~~nkl~g~~~i~aVk~p~~g~~~~~~L~dia~~tGa~~i~~~~~~~l~~~~~~ 369 (600)
T PLN03167 290 ILEDAIRGGYPLLIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLDKVGKE 369 (600)
T ss_pred HHHHHHHhCcCEEEEcCCCCHHHHHHHHHhhccccceEEEEEcccCCcchHHHHHHHHHhhCCEEecccccCCcccCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999 6665 68899999
Q ss_pred ccceeeEEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHH
Q 007981 356 QLGIARKVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLR 435 (582)
Q Consensus 356 ~lG~~~~v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~ 435 (582)
+||+|++|++.++.++++++.++++.+++|+.+|+.+++.+.+.|++++|++|+++|++++++|+|||+|+.+++|+||+
T Consensus 370 ~LG~a~~v~~~~~~t~iig~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~l~~Ri~~l~g~~aiI~vgG~t~~~l~E~er~ 449 (600)
T PLN03167 370 VLGTAAKVVLTKDTTTIVGDGSTQEAVNKRVAQIKNLIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLR 449 (600)
T ss_pred HCceeeEEEEecccceeeCCCccHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHhhcCCcEEEEEecCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHHHHHHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc-C
Q 007981 436 IEDAKNATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-S 514 (582)
Q Consensus 436 i~DAl~~~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~-~ 514 (582)
++||++++|+|+++|+|||||++|++|+.+|++++..+++.+|+++++++++||+.||++||+|||+|+.+++++|++ .
T Consensus 450 i~DAl~avk~ai~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~g~~~~~~Al~~p~r~La~NAG~d~~~vv~~L~~~~ 529 (600)
T PLN03167 450 VEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLENDEQKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSND 529 (600)
T ss_pred HHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHhcchhhhhhcCCCCHHHHHHHHHhcC
Confidence 999999999999999999999999999999999987778888888899999999999999999999999999999984 4
Q ss_pred CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCC
Q 007981 515 DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 572 (582)
Q Consensus 515 ~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~ 572 (582)
++++|||+.+|++.||++.|||||+.||+++|+.|+++|++||++|++|+.+ |+++.
T Consensus 530 ~~~~G~d~~~g~~~dm~~~GI~Dp~~Vk~~al~~A~~~A~~iL~iD~iI~~~-~~~~~ 586 (600)
T PLN03167 530 NPKFGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDCVVVEI-KEPEP 586 (600)
T ss_pred CCCEeEeCCCCcCcchHhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCC
Confidence 6789999999999999999999999999999999999999999999999987 65544
No 4
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=5.5e-111 Score=931.12 Aligned_cols=529 Identities=47% Similarity=0.747 Sum_probs=506.0
Q ss_pred ccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
+.+++.||.+++..+++|++.++++++|||||+||+|||++ .|+++|||||+|||++|+++||.+|+||+|++++|++|
T Consensus 2 ~~~~~~~~~~a~~~~~~~~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~~~a~~q 81 (541)
T PRK12851 2 AAKEVKFHVEAREKMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPTITNDGVTIAKEIELEDKFENMGAQMVREVASKT 81 (541)
T ss_pred CcceecccHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEECCCCCeeEecCHHHHHHHccCCCchhhHHHHHHHHHHHhh
Confidence 35788999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~l 207 (582)
|+++||||||+|+|+++||+++.+++++|+||..|++||++|++.+++.|+++++|+++.++|.++|++|+++++.++++
T Consensus 82 d~e~GDGTTtvviLa~~LL~~a~~li~~Gihp~~I~~G~~~a~~~~~~~L~~~s~~~~~~~~l~~va~~s~~~~~~l~~l 161 (541)
T PRK12851 82 NDVAGDGTTTATVLAQAIVREGAKAVAAGANPMDLKRGIDRAVAAVVEELKANARPVTTNAEIAQVATISANGDAEIGRL 161 (541)
T ss_pred hHhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred HHHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHh
Q 007981 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (582)
Q Consensus 208 i~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~ 287 (582)
+++|+..++++|.|.++.+....+++++++|++|+++|.||+|+++.++|+++++||+|+++|+++++.+++.++++++.
T Consensus 162 v~~Av~~vg~~g~i~i~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~i~ 241 (541)
T PRK12851 162 VAEAMEKVGNEGVITVEESKTAETELEVVEGMQFDRGYLSPYFVTDADKMEAELEDPYILIHEKKISNLQDLLPVLEAVV 241 (541)
T ss_pred HHHHHHHhcccCceEEEEccCCCcceEEEEEEEecCCccccccccCCCCCeEEecccEEEEEcCCcCcHHHHHHHHHHHH
Confidence 99999999988888876554444445999999999999999999998899999999999999999999999999999999
Q ss_pred cCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc-----cccCCCccccceee
Q 007981 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL-----TLAGATSDQLGIAR 361 (582)
Q Consensus 288 ~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~-----~l~~l~~~~lG~~~ 361 (582)
++|+||||++++|+++++++|..|+++|.++|+|||+|+||+.++.+|+|||++|| .++. +++++++++||+|+
T Consensus 242 ~~~~~lvi~~~~I~~~al~~l~~n~i~g~~~i~av~~p~~~~~~~~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~~ 321 (541)
T PRK12851 242 QSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLENVTLEQLGRAK 321 (541)
T ss_pred HhCcCEEEECCCCChHHHHHHHHcCCcCceeEEEEecCccccccHhHHHHHHHHhCCEEeccCCCCCcCcCCHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999 6666 78999999999999
Q ss_pred EEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHH
Q 007981 362 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 441 (582)
Q Consensus 362 ~v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~ 441 (582)
.|++.+++|+++++++++++++.|+++++++++.+.++|++++|++|+++|+|+++||+|||+|+.+++|++|+++||++
T Consensus 322 ~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~er~i~DAl~ 401 (541)
T PRK12851 322 KVVVEKENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGASTEVEVKEKKDRVDDALH 401 (541)
T ss_pred EEEEEcceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcCCCcceee
Q 007981 442 ATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYN 521 (582)
Q Consensus 442 ~~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~Gid 521 (582)
++++++++|+|||||++|++||.+|++++.. ++. +++++++|++||+.||++||+|||+|+.+++++|++.+.++|||
T Consensus 402 a~~~al~~g~VpGGGa~e~~~s~~L~~~~~~-~~~-~~~~~~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~~~~G~d 479 (541)
T PRK12851 402 ATRAAVEEGIVPGGGVALLRAVKALDKLETA-NGD-QRTGVEIVRRALEAPVRQIAENAGAEGSVVVGKLREKPGGYGFN 479 (541)
T ss_pred HHHHHHHcCcccCchHHHHHHHHHHHHHhcC-CcH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhCCCeeee
Confidence 9999999999999999999999999998864 454 56999999999999999999999999999999999877789999
Q ss_pred cCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCCCCCCCCCC
Q 007981 522 AMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPAVPQVPGI 580 (582)
Q Consensus 522 ~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~~~~~~~~~ 580 (582)
+.+|++.||++.|||||+.+|.++|+.|+++|++||++|++|+.+ |++.+.+|+.||=
T Consensus 480 ~~~g~~~d~~~~GIiDp~~vk~~al~~A~e~A~~iL~id~iI~~~-~~~~~~~~~~~~~ 537 (541)
T PRK12851 480 AATNEYGDLYAQGVIDPVKVVRTALQNAASVAGLLLTTEAMVAEK-PKKEPAPPAPPGG 537 (541)
T ss_pred CCCCCccchhhccCEecHHHHHHHHHHHHHHHHHHHhHHHhhhcC-CCCCCCCCCCCCc
Confidence 999999999999999999999999999999999999999999998 8877778888873
No 5
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=9.8e-111 Score=929.68 Aligned_cols=521 Identities=46% Similarity=0.719 Sum_probs=500.1
Q ss_pred ccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
+.|++.||.+++..+++||..|+++++|||||+||+|||++ .|+++|||||+||+++|+++||.+|+||+|++++|++|
T Consensus 2 ~~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~G~~~ITnDG~tIlk~i~i~hp~~~~ga~ll~~~a~~q 81 (544)
T PRK12850 2 AAKEIRFSTDARDRLLRGVNILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVKEVASKT 81 (544)
T ss_pred CcceecccHHHHHHHHHHHHHHHHHHhCCcCCCCCCEEEECCCCCeeEeccHHHHHHHhcCCChhhhHHHHHHHHHHhhh
Confidence 35889999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~l 207 (582)
|+++||||||+|+||++||+++.+++++|+||..|++||++|++.++++|+++++|+++.++|.++|++|+++++.++++
T Consensus 82 d~e~GDGTTt~viLa~~LL~~a~~li~~GihP~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~l 161 (544)
T PRK12850 82 NDLAGDGTTTATVLAQAIVREGAKLVAAGMNPMDLKRGIDLAVAAVVDELKKIAKKVTSSKEIAQVATISANGDESIGEM 161 (544)
T ss_pred cchhcCCcchHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998889999999999999999999
Q ss_pred HHHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHh
Q 007981 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (582)
Q Consensus 208 i~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~ 287 (582)
++||+..++++|.|.++.+....+++++++|++|+++|.||+|+++.++|+++++||+|+++|+++++.+++.++++++.
T Consensus 162 v~eAv~~vg~~g~i~v~~~~~~g~~~~~v~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~l~~i~ 241 (544)
T PRK12850 162 IAEAMDKVGKEGVITVEEAKTLGTELDVVEGMQFDRGYLSPYFVTNPEKMRAELEDPYILLHEKKISNLQDLLPILEAVV 241 (544)
T ss_pred HHHHHHHhcccCceeeEEccccCcceEEEEeEEecCccCcCccccccccCeEEEeCCEEEEEecccCCHHHHHHHHHHHH
Confidence 99999999988888887666566666999999999999999999988889999999999999999999999999999999
Q ss_pred cCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc-----cccCCCccccceee
Q 007981 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL-----TLAGATSDQLGIAR 361 (582)
Q Consensus 288 ~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~-----~l~~l~~~~lG~~~ 361 (582)
++|+||||++++|+++++++|..|+++|.++++|||+|+|++.++.+|+|||++|| .++. +++++++++||+|+
T Consensus 242 ~~g~~lvI~~~~I~d~al~~l~~n~i~~~~~~~avk~p~~g~~~~~~le~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~ 321 (544)
T PRK12850 242 QSGRPLLIIAEDVEGEALATLVVNKLRGGLKSVAVKAPGFGDRRKAMLEDIAVLTGGQVISEDLGIKLENVTLDMLGRAK 321 (544)
T ss_pred HhCCCEEEECCCCChHHHHHHHHcCCcccceEEEEeCCCcCcccHHHHHHHHHHhCCEEeccccCCCcccCCHHHcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999 6666 78999999999999
Q ss_pred EEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHH
Q 007981 362 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 441 (582)
Q Consensus 362 ~v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~ 441 (582)
.|++.++++++++++++++.++.|+++++++++++.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++||++
T Consensus 322 ~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~ 401 (544)
T PRK12850 322 RVLITKENTTIIDGAGDKKNIEARVKQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALH 401 (544)
T ss_pred EEEEEeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhcCCeEEEEECCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcCCCcceee
Q 007981 442 ATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYN 521 (582)
Q Consensus 442 ~~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~Gid 521 (582)
++|+++++|+|||||++|++|+..|+++ .+.++. +++++++|++||+.||++||+|||+|+.+++++|++.+.++|||
T Consensus 402 ~~k~a~~~g~VpGGGa~e~~~s~~L~~~-~~~~~~-~~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~~~~G~d 479 (544)
T PRK12850 402 ATRAAVEEGIVPGGGVALLRARSALRGL-KGANAD-ETAGIDIVRRALEEPLRQIATNAGFEGSVVVGKVAELPGNFGFN 479 (544)
T ss_pred HHHHHHhcCCccCCcHHHHHHHHHHHhc-cCCChH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhCCCccee
Confidence 9999999999999999999999999988 455555 56999999999999999999999999999999999877789999
Q ss_pred cCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCC
Q 007981 522 AMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 572 (582)
Q Consensus 522 ~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~ 572 (582)
+.+|++.||++.|||||+.||.++|++|+++|++||++|++|+.+ |+..+
T Consensus 480 ~~~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~iI~~~-~~~~~ 529 (544)
T PRK12850 480 AQTGEYGDMVEAGIIDPAKVTRTALQDAASIAALLITTEAMVAEA-PKKAA 529 (544)
T ss_pred CCCCcccchhhccCcccHHHHHHHHHHHHHHHHHHHhHHHhhccC-CCCCC
Confidence 999999999999999999999999999999999999999999997 86543
No 6
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=1.6e-110 Score=930.77 Aligned_cols=523 Identities=48% Similarity=0.742 Sum_probs=503.7
Q ss_pred hcccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHH
Q 007981 47 RAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVAS 125 (582)
Q Consensus 47 ~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~ 125 (582)
+++.+++.+|.+++..|++||..|+++++|||||+||+|||++ .|+++|||||+||+++|+++||++|+||+|++++|+
T Consensus 11 ~~~~~~~~~~~~a~~~~i~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDG~TIlk~i~~~~p~~~~~a~ll~~~a~ 90 (555)
T PTZ00114 11 RFKGKEIRFGDEARQSLLKGIERLADAVAVTLGPKGRNVIIEQEYGSPKITKDGVTVAKAIEFSDRFENVGAQLIRQVAS 90 (555)
T ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCCcEEEECCCCCeEEeeChHHHHHhcCcCCcchhHHHHHHHHHHH
Confidence 6677889999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred hhhhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHH
Q 007981 126 KMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIG 205 (582)
Q Consensus 126 ~qd~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~ 205 (582)
+||+++||||||+||||++||+++.+++++|+||..|++||++|++.++++|+++++|+++.++|.++|+||+++++.++
T Consensus 91 ~qd~evGDGTTtvvvLa~~LL~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~ 170 (555)
T PTZ00114 91 KTNDKAGDGTTTATILARAIFREGCKAVAAGLNPMDLKRGIDLAVKVVLESLKEQSRPVKTKEDILNVATISANGDVEIG 170 (555)
T ss_pred hhccccCCcccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHcCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHH
Q 007981 206 NLIADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEK 285 (582)
Q Consensus 206 ~li~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~ 285 (582)
+++++|+..++++|.|.++.|++++|++++++|++|+++|.||+|+++.++|+++++||+|+++|++|++++++.+++++
T Consensus 171 ~li~eAv~~vg~~g~I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~L~~~~~i~~~le~ 250 (555)
T PTZ00114 171 SLIADAMDKVGKDGTITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKVELENPLILVTDKKISSIQSILPILEH 250 (555)
T ss_pred HHHHHHHHHhCcCCcEEEcCCCCccceEEEEEEEEEeccccccccccccccCeEEecCCEEEEEcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999988999999999999999999989999999999999999999999999999999
Q ss_pred HhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccccc------cCCCccccc
Q 007981 286 TTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTL------AGATSDQLG 358 (582)
Q Consensus 286 i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l------~~l~~~~lG 358 (582)
+.+.|+||||++++|+++|+++|..|+++|.++|+|||+|++|+.++++|+|||++|| +++.+. +++++++||
T Consensus 251 i~~~~~~llI~~~~i~~~al~~L~~n~~~g~~~i~avk~~~~g~~~~~~l~~la~~tG~~~i~~~~~~~~l~~~~~~~LG 330 (555)
T PTZ00114 251 AVKNKRPLLIIAEDVEGEALQTLIINKLRGGLKVCAVKAPGFGDNRKDILQDIAVLTGATVVSEDNVGLKLDDFDPSMLG 330 (555)
T ss_pred HHHhCCCEEEECCCCcHHHHHHHHHhCCCCceEEEEEecCCCCcchHHHHHHHHHHhCCEEecccccccCcccCCHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999 666665 888899999
Q ss_pred eeeEEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHH
Q 007981 359 IARKVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIED 438 (582)
Q Consensus 359 ~~~~v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~D 438 (582)
+|++|+++++++++++++++++.|+.|+++++.+++.+.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++|
T Consensus 331 ~a~~v~~~~~~~~~~~~~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~i~G~t~~~l~E~~r~i~D 410 (555)
T PTZ00114 331 SAKKVTVTKDETVILTGGGDKAEIKERVELLRSQIERTTSEYDKEKLKERLAKLSGGVAVIKVGGASEVEVNEKKDRIED 410 (555)
T ss_pred CCceEEEEeceEEEEeCCCcHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCccccccHHHHHHHHHHhhhhc--cCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc-CC
Q 007981 439 AKNATFAAMDEGIVPGGGATYVHLLEHIPIIKN--SMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-SD 515 (582)
Q Consensus 439 Al~~~~~al~~gvvpGGGa~e~~~s~~L~~~~~--~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~-~~ 515 (582)
|+|++|+++++|+|||||++|++||.+|++++. +.++. +++++++|++||+.||++||+|||+|+.+++++|++ .+
T Consensus 411 al~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~-~~~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~~~ 489 (555)
T PTZ00114 411 ALNATRAAVEEGIVPGGGVALLRASKLLDKLEEDNELTPD-QRTGVKIVRNALRLPTKQIAENAGVEGAVVVEKILEKKD 489 (555)
T ss_pred HHHHHHHHHhcCcccCCcHHHHHHHHHHHHHhhccCCchH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCC
Confidence 999999999999999999999999999998874 35555 569999999999999999999999999999999987 57
Q ss_pred CcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCC
Q 007981 516 WRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPK 571 (582)
Q Consensus 516 ~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~ 571 (582)
+++|||+.+|++.||++.|||||+.||+++|+.|+++|++||++|++|+.. |++.
T Consensus 490 ~~~G~d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~-~~~~ 544 (555)
T PTZ00114 490 PSFGYDAQTGEYVNMFEAGIIDPTKVVRSALVDAASVASLMLTTEAAIVDL-PKEK 544 (555)
T ss_pred CCEeEeCCCCcEeeHHhCCCEeCHHHHHHHHHHHHHHHHHHHhHHHHHHhC-Cccc
Confidence 789999999999999999999999999999999999999999999999997 7553
No 7
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=5.2e-110 Score=925.58 Aligned_cols=520 Identities=47% Similarity=0.731 Sum_probs=500.0
Q ss_pred ccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
+.|++.||.+++..+++|+..|+++++|||||+||+|||++ .|+++|||||+|||++|+++||++|+||+|++++|++|
T Consensus 2 ~~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~iTnDG~TIlk~i~~~~~~~~p~akll~e~a~~q 81 (545)
T PRK12852 2 AAKDVKFSGDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKT 81 (545)
T ss_pred CcchhhccHHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCcccChHHHHHHHHHhhc
Confidence 35889999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~l 207 (582)
|+++||||||+|+||++||+++.+++++|+||..|++||++|++.+++.|+++++|+++.+++.++|++|+++++.++++
T Consensus 82 ~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~l 161 (545)
T PRK12852 82 NDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVKDIEKRAKPVASSAEIAQVGTISANGDAAIGKM 161 (545)
T ss_pred CceecCCcchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHhhhcCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888999999999999999999
Q ss_pred HHHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHh
Q 007981 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (582)
Q Consensus 208 i~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~ 287 (582)
+++|+.+++++|.|.++.|+++.+.+++++|+.|+++|.||||++++++|+++++||+|+++|++|++++++.++++.+.
T Consensus 162 i~eA~~~vg~~g~i~v~~g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~~l~n~~Ili~d~~i~~~~~i~~~l~~i~ 241 (545)
T PRK12852 162 IAQAMQKVGNEGVITVEENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTVELDDAYILLHEKKLSGLQAMLPVLEAVV 241 (545)
T ss_pred HHHHHHHhccCCceeeecCCCcceEEEEEEeEEecCCccCCccccccccceEEecCceEEEecCccCCHHHHHHHHHHHH
Confidence 99999999999999999999885555999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc-----cccCCCccccceee
Q 007981 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL-----TLAGATSDQLGIAR 361 (582)
Q Consensus 288 ~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~-----~l~~l~~~~lG~~~ 361 (582)
++|+||||++++|+++|+++|..|+++|.++|+|||+|+|++.++++|+|||++|| .++. +++++++++||+|+
T Consensus 242 ~~g~~lvI~~~~i~~~al~~l~~nk~~~~~~i~av~~~~~~~~r~~~l~~ia~~tGa~~i~~~~~~~l~~~~~~~lG~~~ 321 (545)
T PRK12852 242 QSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQLISEDLGIKLENVTLKMLGRAK 321 (545)
T ss_pred HhCcCEEEECCCCcHHHHHHHHHhcccccceEEEEecCCcccchHhHHHHHHHhcCCEEEecCcCCCcCCCCHHHCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999 6666 78999999999999
Q ss_pred EEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHH
Q 007981 362 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 441 (582)
Q Consensus 362 ~v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~ 441 (582)
.|+++++++++++++++++.++.|+++|+.+++++.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++||+|
T Consensus 322 ~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~R~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~ 401 (545)
T PRK12852 322 KVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALN 401 (545)
T ss_pred EEEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC-CCccee
Q 007981 442 ATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS-DWRFGY 520 (582)
Q Consensus 442 ~~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~-~~~~Gi 520 (582)
++|+++++|+|||||++|++|+++|.+++.. .+. +++++++|++||+.||++||+|||+|+.+++++|++. ++++||
T Consensus 402 a~~~a~~~g~VpGGGa~e~~~s~~L~~~~~~-~~~-~q~~i~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~~~~~G~ 479 (545)
T PRK12852 402 ATRAAVQEGIVPGGGVALLRAKKAVGRINND-NAD-VQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGF 479 (545)
T ss_pred HHHHHHhcCCCcCchHHHHHHHHHHHHhhcC-CcH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeE
Confidence 9999999999999999999999999998865 444 5699999999999999999999999999999999874 567999
Q ss_pred ecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCC
Q 007981 521 NAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPK 571 (582)
Q Consensus 521 d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~ 571 (582)
|+.+|++.||++.|||||+.+|+++|+.|+++|++||++|++|+.+ |+++
T Consensus 480 d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~id~iI~~~-~~~~ 529 (545)
T PRK12852 480 DAQTEEYVDMVAKGIIDPAKVVRTALQDAASVAGLLVTTEAMVAEL-PKKD 529 (545)
T ss_pred eCcCCCcccHHhCcCCcChHHHHHHHHHHHHHHHHHHhHHHHhhcC-CCCC
Confidence 9999999999999999999999999999999999999999999987 8653
No 8
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=1.3e-109 Score=918.41 Aligned_cols=515 Identities=55% Similarity=0.811 Sum_probs=497.1
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
|++.||.+++..+++|+..++++++|||||+||+|||++ .|+++|||||+||+|+|+++||++|+||+|++++|++||+
T Consensus 2 ~~~~~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~akll~~~a~~qd~ 81 (524)
T TIGR02348 2 KQIKFDEEARKALLRGVDKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDKFENMGAQLVKEVASKTND 81 (524)
T ss_pred ccccccHHHHHHHHHHHHHHHHHhccCcCCCCCcEEEECCCCCeeEeccHHHHHHHccCCChhhHHHHHHHHHHHHccCc
Confidence 678999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHHHH
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLIA 209 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~li~ 209 (582)
++||||||+|+||++||+++.+++++|+||..|++||++|++.++++|++++.|+++.++|.++|++|++++++++++++
T Consensus 82 e~GDGTTtvviLa~~Ll~~a~~li~~GihP~~Ii~G~~~A~~~~l~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~lv~ 161 (524)
T TIGR02348 82 VAGDGTTTATVLAQAIVKEGLKNVAAGANPIELKRGIEKAVEAAVEELKKLSKPVKGKKEIAQVATISANNDEEIGSLIA 161 (524)
T ss_pred eeCCCcchHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999889999999999999999999999
Q ss_pred HHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHhcC
Q 007981 210 DAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQL 289 (582)
Q Consensus 210 ~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~~~ 289 (582)
+|+..+++++.|.++.|+..+|++++++|++|+++|.||+|.++.++|+++++||+|+++|++|++++++.++++++.++
T Consensus 162 ~A~~~v~~~~~i~v~~g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~i~~~l~~i~~~ 241 (524)
T TIGR02348 162 EAMEKVGKDGVITVEESKSLETELEVVEGMQFDRGYISPYFVTDAEKMEVELENPYILITDKKISNIKDLLPLLEKVAQS 241 (524)
T ss_pred HHHHHhCcCCcEeeecCCCccccEEEEEeEEEcCCCCCcccccCccCCeEEeeCceeeeccCCcCCHHHHHHHHHHHHHh
Confidence 99999999898999889988776699999999999999999998889999999999999999999999999999999999
Q ss_pred CCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc-----cccCCCccccceeeEE
Q 007981 290 SVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL-----TLAGATSDQLGIARKV 363 (582)
Q Consensus 290 ~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~-----~l~~l~~~~lG~~~~v 363 (582)
|+||||++++|+++|+++|..|+++|+++|+|||+|++++.++++|+|||++|| .++. +++++++++||+|+.|
T Consensus 242 g~~lvi~~~~i~~~al~~l~~n~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~LG~~~~v 321 (524)
T TIGR02348 242 GKPLLIIAEDVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLEDIAILTGGQVISEELGLKLEEVTLDDLGKAKKV 321 (524)
T ss_pred CcCEEEECCCCChHHHHHHHHhhcccccceEEEECCCccchhhhhHHHHHHHhCCEEecccccCCcCcCCHHHCCCceEE
Confidence 999999999999999999999999999999999999999999999999999999 7666 8999999999999999
Q ss_pred EEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHH
Q 007981 364 TVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNAT 443 (582)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~ 443 (582)
++.++++++++++++++.+..|+++++++++++.+.|++++|+||+++|+|+++||+|||+|+.+++|++|+++||+|++
T Consensus 322 ~~~~~~~~~i~~~~~~~~~~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~Dal~~~ 401 (524)
T TIGR02348 322 TVDKDNTTIVEGAGDKAAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKKLRVEDALNAT 401 (524)
T ss_pred EEeecEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcCCCcceeecC
Q 007981 444 FAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYNAM 523 (582)
Q Consensus 444 ~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~Gid~~ 523 (582)
|+++++|+|||||++|++|+.+|.+ +.+.++. +++++++|++||+.||++||+|||+|+.+++++|++.+.++|||+.
T Consensus 402 r~a~~~g~VpGGGa~e~~~s~~L~~-~~~~~~~-~~~~~~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~~~~~G~d~~ 479 (524)
T TIGR02348 402 RAAVEEGIVPGGGVALLRAAAALEG-LKGDNED-EAIGIDIVKRALEAPLRQIAENAGKDGAVVAEKVKESKGNFGFNAA 479 (524)
T ss_pred HHHHhcCCccCCcHHHHHHHHHHHH-hccCChH-HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcCCCeeEeCc
Confidence 9999999999999999999999998 5556665 5699999999999999999999999999999999875445999999
Q ss_pred CCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCC
Q 007981 524 TGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIK 568 (582)
Q Consensus 524 ~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p 568 (582)
+|++.||++.|||||+.||.++|+.|+++|++||++|++|.+. |
T Consensus 480 ~g~~~d~~~~gI~Dp~~vk~~al~~A~~~a~~iL~id~ii~~~-~ 523 (524)
T TIGR02348 480 TGEYEDLVEAGIIDPTKVTRSALQNAASIAGLLLTTEAVVADK-P 523 (524)
T ss_pred CCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhcC-C
Confidence 9999999999999999999999999999999999999999876 5
No 9
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=1.9e-109 Score=918.08 Aligned_cols=517 Identities=50% Similarity=0.794 Sum_probs=496.3
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
.|++.||.++|+++++||..++++|+|||||+||+|||++ .|+++|||||+|||++|+++||++++|++|++++|.+|+
T Consensus 2 ~~~~~~~~~~~~~~~~g~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~a~~g~~li~~~a~~~~ 81 (529)
T CHL00093 2 SKKILYQDNARRALERGMDILAEAVSVTLGPKGRNVVLEKKYGSPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTN 81 (529)
T ss_pred CceeecCHHHHHHHHHHHHHHHHHHhcccCCCCCcEEEECCCCCeeEeccHHHHHHHccCcCHHHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~li 208 (582)
+++||||||+||||++||+++.+++++|+||..|++||++|.+.+++.|+++++|+++.++|.+||++|+++++.|++|+
T Consensus 82 ~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~d~~~L~~VA~ts~~~~~~l~~lv 161 (529)
T CHL00093 82 DVAGDGTTTATVLAYAIVKQGMKNVAAGANPISLKRGIEKATQYVVSQIAEYARPVEDIQAITQVASISAGNDEEVGSMI 161 (529)
T ss_pred ceecCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHhccChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred HHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCH-HhHHHHHHHHh
Q 007981 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTV-KEIVPLLEKTT 287 (582)
Q Consensus 209 ~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~-~el~~~le~i~ 287 (582)
++|+.+++++|.|.++.|+..++.+++++|++|+++|.||||++++++|+.+++||+|+++|++|++. .++.++++.+.
T Consensus 162 ~eAv~~vg~~g~i~~~~g~~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~~l~n~~Ili~d~~le~~~~~i~~~l~~i~ 241 (529)
T CHL00093 162 ADAIEKVGREGVISLEEGKSTVTELEITEGMRFEKGFISPYFVTDTERMEVVQENPYILLTDKKITLVQQDLLPILEQVT 241 (529)
T ss_pred HHHHHHhccCCceeecCCCccceeeEEEeeEEecCccCcCccccCCccceEEecCceehhhcCCCCchHHHHHHHHHHHH
Confidence 99999999889888887776666669999999999999999999998999999999999999999997 78999999999
Q ss_pred cCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc-----cccCCCccccceee
Q 007981 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL-----TLAGATSDQLGIAR 361 (582)
Q Consensus 288 ~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~-----~l~~l~~~~lG~~~ 361 (582)
+++.||||++++|+++++++|+.|+++|+++|+|||+|++++.++++|+|||++|| .+++ +++++++++||+|+
T Consensus 242 ~~~~~lvi~~~~i~~~al~~l~l~k~~g~~~i~avr~~~~~~~~k~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~LG~~~ 321 (529)
T CHL00093 242 KTKRPLLIIAEDVEKEALATLVLNKLRGIVNVVAVRAPGFGDRRKAMLEDIAILTGGQVITEDAGLSLETIQLDLLGQAR 321 (529)
T ss_pred hcCCCEEEEcCCCChHHHHHHHHhhhcccceEEEEecCCCCcchHHHHHHHHHhhCCEEecccccCCcCCCCHHHCCcce
Confidence 99999999999999999999999999999999999999999999999999999999 6666 79999999999999
Q ss_pred EEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHH
Q 007981 362 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 441 (582)
Q Consensus 362 ~v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~ 441 (582)
.|++.++++++++ .++++.+..||++++++++.+.+.|++++|+||+++|+|+++||+|||+|+.+++|++|+++||++
T Consensus 322 ~v~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~eR~~~l~g~~~~I~irg~t~~~l~E~er~i~DAl~ 400 (529)
T CHL00093 322 RIIVTKDSTTIIA-DGNEEQVKARCEQLRKQIEIADSSYEKEKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDAIN 400 (529)
T ss_pred EEEEecCEEEEEe-cCcHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHhcCCeEEEEeccCcHHHHHHHHHHHHHHHH
Confidence 9999999999998 667899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccccccHHHHHHHHHHhhhhc-cCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcCCCccee
Q 007981 442 ATFAAMDEGIVPGGGATYVHLLEHIPIIKN-SMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGY 520 (582)
Q Consensus 442 ~~~~al~~gvvpGGGa~e~~~s~~L~~~~~-~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~Gi 520 (582)
++|+++++|+|||||++|++||++|+++++ +.++. +++++++|++||+.||++||+|||+|+.+++++++..+.++||
T Consensus 401 a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~g~-~~~~i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~~~~~G~ 479 (529)
T CHL00093 401 ATKAAVEEGIVPGGGATLVHLSENLKTWAKNNLKED-ELIGALIVARAILAPLKRIAENAGKNGSVIIEKVQEQDFEIGY 479 (529)
T ss_pred HHHHHHHcCcccCCcHHHHHHHHHHHHHhccCCChH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHccCCCEeE
Confidence 999999999999999999999999999876 56665 4689999999999999999999999999999999887778999
Q ss_pred ecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCC
Q 007981 521 NAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQ 569 (582)
Q Consensus 521 d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~ 569 (582)
|+.+|++.||++.|||||+.||.++|+.|+++|++||++|++|+.+ |+
T Consensus 480 d~~~g~~~d~~~~GI~Dp~~vk~~al~~A~e~a~~iL~id~ii~~~-~~ 527 (529)
T CHL00093 480 NAANNKFVNMYEAGIIDPAKVTRSALQNAASIASMILTTECIIVDK-KE 527 (529)
T ss_pred ECCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CC
Confidence 9999999999999999999999999999999999999999999997 75
No 10
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=6.8e-109 Score=914.51 Aligned_cols=519 Identities=47% Similarity=0.743 Sum_probs=498.3
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
+|++.||.+++..+++|+..++++|+|||||+||+|||++ .|+++|||||+||+++|++++|++|+||+|++++|++||
T Consensus 3 ~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~d~~~~pgakll~e~a~~qd 82 (546)
T PRK14104 3 AKEVKFGVDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSA 82 (546)
T ss_pred cceecchHHHHHHHHHHHHHHHHHHhhccCCCCCceEEEcCCCCeeEeccHHHHHHHhcCCCcccChHHHHHHHHHHhhc
Confidence 4788999999999999999999999999999999999999 999999999999999999998888889999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~li 208 (582)
+++||||||+||||++||+++.+++++|+||..|++||++|++.+++.|+++++|+++.++|.++|++|+++++.+++++
T Consensus 83 ~e~GDGTTTvvvLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~v~~~~~l~~va~~s~~~d~~i~~lv 162 (546)
T PRK14104 83 DAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIGKFL 162 (546)
T ss_pred ccccCcccHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999887889999999999999999999
Q ss_pred HHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHhc
Q 007981 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQ 288 (582)
Q Consensus 209 ~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~~ 288 (582)
++|+..++++|.|.++.++++++++++++|++|+++|.||||+++++.++.+++||+|+++|.+++++++++++++++.+
T Consensus 163 ~~Av~~vg~~g~i~v~~~~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~i~~ 242 (546)
T PRK14104 163 ADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEKKLSSLNELLPLLEAVVQ 242 (546)
T ss_pred HHHHHHhccCCceeeEecccccceEEEEEEEEEeCCCCCcchhcCcccCceeeeCcEEEEehhhhcCHHHHHHHHHHHHH
Confidence 99999999999999998888876669999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Ccccc-----ccCCCccccceeeE
Q 007981 289 LSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLT-----LAGATSDQLGIARK 362 (582)
Q Consensus 289 ~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~-----l~~l~~~~lG~~~~ 362 (582)
+|+||||++++|+++|+++|..|++++.++|+|||+|+||+.++.+|+|||++|| +++.+ ++++++++||+|++
T Consensus 243 ~g~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~av~~~~~g~~r~~~l~~ia~~tG~~~i~~~~~~~l~~~~~~~LG~a~~ 322 (546)
T PRK14104 243 TGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLQMLGRAKK 322 (546)
T ss_pred hCcCEEEECCCCcHHHHHHHHhCcccceeeEEEEeccCCCcchHHHHHHHHHHhCCEEEecCCCCCcCcCCHHHCCceeE
Confidence 9999999999999999999999999999999999999999999999999999999 66666 89999999999999
Q ss_pred EEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHH
Q 007981 363 VTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNA 442 (582)
Q Consensus 363 v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~ 442 (582)
|++++++++++++|++++.+..|+++|+.+++++.+.|++++|+||+++|+++++||+|||+|+.+++|++|+++||+|+
T Consensus 323 v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r~i~Dal~a 402 (546)
T PRK14104 323 VMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHA 402 (546)
T ss_pred EEEcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc-CCCcceee
Q 007981 443 TFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-SDWRFGYN 521 (582)
Q Consensus 443 ~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~-~~~~~Gid 521 (582)
+++++++|+|||||++|++|+..|+++.. .. .++++++++|++||+.||++||+|||+|+.+++.+|++ .++++|||
T Consensus 403 ~~~ai~~g~VpGGGa~e~~~s~~L~~~~~-~~-~~~~~~i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~~~~~G~d 480 (546)
T PRK14104 403 TRAAVEEGIVPGGGVALLRASEQLKGIKT-KN-DDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYGFD 480 (546)
T ss_pred HHHHHHcCcCcCchHHHHHHHHHHHHhhc-CC-hHHHHHHHHHHHHHHhhHHHHHHhCCCCHHHHHHHHHhcCCCcEeEe
Confidence 99999999999999999999999998743 33 45679999999999999999999999999999999987 45679999
Q ss_pred cCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCC
Q 007981 522 AMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPK 571 (582)
Q Consensus 522 ~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~ 571 (582)
+.+|++.||++.|||||+.||+++|++|+++|++||++|++|..+ |++.
T Consensus 481 ~~~g~~~d~~~~GI~Dp~~vk~~al~~A~~~a~~iL~id~~I~~~-~~~~ 529 (546)
T PRK14104 481 SQTGEYGNLVSKGIIDPTKVVRTAIQNAASVAALLITTEAMVAEL-PKKG 529 (546)
T ss_pred CCCCceeehHhcCCEEcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcCC
Confidence 999999999999999999999999999999999999999999987 8654
No 11
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=7.2e-109 Score=911.09 Aligned_cols=512 Identities=53% Similarity=0.798 Sum_probs=496.4
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
+++.||.+++..+++||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||.+|+||+|++++|++||+
T Consensus 1 ~~~~~g~~a~~~~i~~~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~a~ll~~~a~~qd~ 80 (520)
T cd03344 1 KDIKFGEEARKALLRGVNKLADAVKVTLGPKGRNVVIEKSFGSPKITKDGVTVAKEIELEDPFENMGAQLVKEVASKTND 80 (520)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEECCCCCeEEEecHHHHHHHcccCCcchhHHHHHHHHHHhhhcc
Confidence 467899999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHHHH
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLIA 209 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~li~ 209 (582)
++||||||+|+||++||+++.+++++|+||..|++||+.|.+.++++|+++++|+++.++|.++|+||+++++.++++++
T Consensus 81 e~GDGTTtvviLa~~Ll~~~~~li~~gi~p~~I~~G~~~a~~~~~~~L~~~~~~i~~~~~l~~va~ts~~~~~~l~~lv~ 160 (520)
T cd03344 81 VAGDGTTTATVLARAIIKEGLKAVAAGANPMDLKRGIEKAVEAVVEELKKLSKPVKTKEEIAQVATISANGDEEIGELIA 160 (520)
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHhcC
Q 007981 210 DAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQL 289 (582)
Q Consensus 210 ~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~~~ 289 (582)
+|+..++++|.|.+++|++++|++++++|++|+++|.||+|.+++++|+++++||+|+++|+++++++++.++++++.++
T Consensus 161 ~A~~~v~~~~~i~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~l~~~~~l~~~l~~i~~~ 240 (520)
T cd03344 161 EAMEKVGKDGVITVEEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENPYILLTDKKISSIQELLPILELVAKA 240 (520)
T ss_pred HHHHHhccCCcEEEEeCCCcceeEEEEeeEEecCCCCCCccccCcccCeEEeeCCEEEEECCCCCCHHHHHHHHHHHHhh
Confidence 99999998888999999999996699999999999999999998888999999999999999999999999999999999
Q ss_pred CCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc-----cccCCCccccceeeEE
Q 007981 290 SVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL-----TLAGATSDQLGIARKV 363 (582)
Q Consensus 290 ~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~-----~l~~l~~~~lG~~~~v 363 (582)
|+||||++++|+++|+++|..|++++.++++|||+|+++++++++|+|||.+|| .+++ +++++++++||+|+.|
T Consensus 241 ~~~lvi~~~~i~~~al~~l~~~~i~~~~~v~avk~~~~~~~~~~~l~~la~~tGa~~~~~~~~~~~~~~~~~~LG~~~~v 320 (520)
T cd03344 241 GRPLLIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEELGLKLEDVTLEDLGRAKKV 320 (520)
T ss_pred CCCEEEEcCCCCHHHHHHHHHcCCccCceEEEEeCCCCCcccHHHHHHHHHHhCCEEecccccCCcccCCHHHCCcceEE
Confidence 999999999999999999999999999999999999999999999999999999 6666 7889999999999999
Q ss_pred EEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHH
Q 007981 364 TVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNAT 443 (582)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~ 443 (582)
++++++++++++++++++++.|+++++++++++.++|++++|+||+++|+++.|||+|||+|+.+++|++|+++||++++
T Consensus 321 ~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~~r~i~Dal~~~ 400 (520)
T cd03344 321 VVTKDDTTIIGGAGDKAAIKARIAQIRKQIEETTSDYDKEKLQERLAKLSGGVAVIKVGGATEVELKEKKDRVEDALNAT 400 (520)
T ss_pred EEeeceEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEEecCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcCCCcceeecC
Q 007981 444 FAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYNAM 523 (582)
Q Consensus 444 ~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~Gid~~ 523 (582)
|+++++|+|||||++|++|+++|++++. .++. +++++++|++||+.||++||+|||+|+.+++++|++.+.++|||+.
T Consensus 401 k~a~~~g~VpGGGa~e~~~s~~L~~~~~-~~~~-~~~~~~~~a~Al~~ip~~La~NaG~d~~~vi~~l~~~~~~~G~d~~ 478 (520)
T cd03344 401 RAAVEEGIVPGGGVALLRASPALDKLKA-LNGD-EKLGIEIVRRALEAPLRQIAENAGVDGSVVVEKVLESPDGFGYDAA 478 (520)
T ss_pred HHHHhcCCCcCCcHHHHHHHHHHHHhcc-CChH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhcCCEeEECC
Confidence 9999999999999999999999999986 6665 4699999999999999999999999999999999987669999999
Q ss_pred CCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhc
Q 007981 524 TGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLA 564 (582)
Q Consensus 524 ~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 564 (582)
+|++.||++.|||||+.+|.++|+.|+++|++||++|.+|.
T Consensus 479 ~g~~~d~~~~gV~Dp~~vk~~~l~~A~~~a~~iL~id~~i~ 519 (520)
T cd03344 479 TGEYVDMIEAGIIDPTKVVRSALQNAASVASLLLTTEALVV 519 (520)
T ss_pred CCcccchHhccCeecHHHHHHHHHHHHHHHHHHHhhheEEe
Confidence 99999999999999999999999999999999999999885
No 12
>KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.1e-100 Score=798.85 Aligned_cols=520 Identities=49% Similarity=0.753 Sum_probs=506.2
Q ss_pred ccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
++|++.||.++|..+++|++.||++|.+||||+||+++|.+ +|.|+|||||.|++++++++++++|+||+|+++++.++
T Consensus 15 ~ak~i~fg~~~r~~ll~Gv~~Ladav~~TlgpKgrnViieq~~gsPkvtkdgvTva~si~l~d~~~n~gaklvq~va~~t 94 (550)
T KOG0356|consen 15 YAKDIKFGKDVRAKLLQGVDLLADAVAVTLGPKGRNVIIEQSWGSPKVTKDGVTVAKSIELKDKYENIGAKLVQDVANNT 94 (550)
T ss_pred cccccccCHHHHHHHHhhHHHHHHHhhhhccCCcceEEcccccCCCceecCCceeeccccccchhhhhccHHHHHHHhhc
Confidence 89999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~l 207 (582)
++.+||||||+++|++++.+++.+-+.+|.+|..|++|+++|.+.+++.|+++|+|+++.+++.+||++|+++|..++++
T Consensus 95 N~~agdGtttatvlar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~eeIaqVAtiSAngD~~ig~l 174 (550)
T KOG0356|consen 95 NEEAGDGTTTATVLARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTPEEIAQVATISANGDKEIGNL 174 (550)
T ss_pred cCccccCcchHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhhhcCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHh
Q 007981 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (582)
Q Consensus 208 i~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~ 287 (582)
+.+|+.++|++|+|+++.|.+++|++++++||.||+||++|||+++++++.++|+||++++.+.+|++++++.+.+|...
T Consensus 175 i~~a~~kvG~~GVItv~~gkt~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll~~kki~~v~~ivp~LE~A~ 254 (550)
T KOG0356|consen 175 ISDAMKKVGRKGVITVKDGKTLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLLSEKKISSVQSIVPALELAL 254 (550)
T ss_pred HHHHHHHhCcCCeEEeecCCccccchhhhhcccccccccCccccccchhhhhhhhhhhhhhhhhhhhHHHHHhHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC------Ccc-ccccCCCcccccee
Q 007981 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG------ELG-LTLAGATSDQLGIA 360 (582)
Q Consensus 288 ~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG------~i~-~~l~~l~~~~lG~~ 360 (582)
+...||||++++++.++|.+|+.|++++.++++|||+|+||+.+++.|.||+.+|| ... .++++.+.++||.+
T Consensus 255 ~~~~PLliIAeDi~~eaL~tLIlNkLk~glqV~AvKapgfGdnrk~~l~Diai~Tg~~v~~~e~~~l~le~~~~~dLG~~ 334 (550)
T KOG0356|consen 255 AKRRPLLIIAEDIDGEALATLVLNKLKGGLQVVAVKAPGFGDNRKNLLKDIAILTGATVFGEELSTLNLEDAKLEDLGEV 334 (550)
T ss_pred hccCceEEEehhcchhHHHHHHhhhhccceeEEEEecCCCcchHHHhhhHHHHHhhhhhhccchhhcccccCchhhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999 222 56788899999999
Q ss_pred eEEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHH
Q 007981 361 RKVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAK 440 (582)
Q Consensus 361 ~~v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl 440 (582)
+++.++++.++++.+.+++.+++.||++++..++.+.+.|++++++||+++|++++++|.|+|.|+.|++|++++++|||
T Consensus 335 ~evvvtkd~t~ll~g~~~~~~v~~rIeqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~ekk~rv~dal 414 (550)
T KOG0356|consen 335 GEVVVTKDDTMLLKGKGNKAQVEGRIEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNEKKDRVEDAL 414 (550)
T ss_pred eeEEEecCcceeeCCCCCHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhhhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcCCCccee
Q 007981 441 NATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGY 520 (582)
Q Consensus 441 ~~~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~Gi 520 (582)
+++++|+++|+|||||+++++|+..|.+... .++.+++.|++++.+||..|.++|++|||.|+..++.|++. ..+||
T Consensus 415 nat~aaveeGivpGGG~all~~~~~l~~lk~-~~~~~~k~G~eiv~~Al~~P~~~IakNAGvdg~~vv~Kv~~--~~~gy 491 (550)
T KOG0356|consen 415 NATRAAVEEGIVPGGGTALLRAIPVLDELKA-TNNFDQKVGVEIVKKALRLPAQTIAKNAGVDGSVVVEKVLN--DDYGY 491 (550)
T ss_pred HHHHHHhhcCcccCCchHHHHhhhhhhhccc-ccchHhhhhHHHHHHHHhhhHHHHHHhcCCchHHHHHHHHh--hhhhh
Confidence 9999999999999999999999999998875 45667788999999999999999999999999999999994 49999
Q ss_pred ecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCC
Q 007981 521 NAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 572 (582)
Q Consensus 521 d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~ 572 (582)
|..+|+++||++.||+||+.|.+++|..|..+|+++++++.+|... |++++
T Consensus 492 da~~~ey~dlv~~GiidP~kVvr~al~~a~~vasll~tte~vvtei-pk~~~ 542 (550)
T KOG0356|consen 492 DAAKGEYVDLVEAGIIDPTKVVRTALTDAAGVASLLTTTEAVVTEI-PKEEA 542 (550)
T ss_pred hhhcccHHHHHhccCCChHHHHHHhhhhhhHHHHHHhhheeEEEec-ccccc
Confidence 9999999999999999999999999999999999999999999998 98773
No 13
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=7.5e-93 Score=787.79 Aligned_cols=469 Identities=20% Similarity=0.309 Sum_probs=423.4
Q ss_pred ccccchhhHHhhcccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhh
Q 007981 36 RNQSRKMVAVVRAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIEN 114 (582)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~ 114 (582)
||+|.|+.+..+....++.+|.+++..|++||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~i~~~v~tslGP~G~~kmi~~~~G~~~iTnDG~tIlk~l~~~hP~-- 78 (526)
T cd03339 1 DEYGRPFIIVREQEKKKRLKGLEAHKSHILAAKSVANILRTSLGPRGMDKILVSPDGEVTVTNDGATILEKMDVDHQI-- 78 (526)
T ss_pred CCCCCCeEEecCCCccccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEECCCCCEEEeCcHHHHHHHhcccCHH--
Confidence 567777544433323469999999999999999999999999999999999999 99999999999999999999997
Q ss_pred HHhHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC----CHHHH
Q 007981 115 AGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT----GRDDI 190 (582)
Q Consensus 115 ~~akLl~~~a~~qd~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~~~L 190 (582)
|+|++++|++||+++||||||+|+||++||+++.+++++|+||..|++||++|++.+++.|+++++|++ +.+.|
T Consensus 79 --akll~~~a~~q~~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l 156 (526)
T cd03339 79 --AKLLVELSKSQDDEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADKIEFSPDNKEPL 156 (526)
T ss_pred --HHHHHHHHHhhhhhhcCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCcccHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999985 57889
Q ss_pred HHHHHHhcCCc------hhHHHHHHHHHHHhccC-------CcEEE--eCCCCcccceeeeeceEEecccCCcccccccc
Q 007981 191 KAVASISAGND------EFIGNLIADAIIKIGAD-------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQE 255 (582)
Q Consensus 191 ~~va~ts~~~~------~~l~~li~~Av~~v~~~-------g~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~ 255 (582)
.++|+||++++ +.|++++++|+..+... ..|++ ..|++++|| ++++|++|+++|.||+
T Consensus 157 ~~ia~tsl~sk~~~~~~~~~s~i~v~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS-~~v~Givi~~~~~~~~------ 229 (526)
T cd03339 157 IQTAMTSLGSKIVSRCHRQFAEIAVDAVLSVADLERKDVNFELIKVEGKVGGRLEDT-KLVKGIVIDKDFSHPQ------ 229 (526)
T ss_pred HHHHHHhhcccchhhHHHHHHHHHHHHHHHHhhcCCCccchHHeEEEEecCcCHHHc-ceeeeEEEecccCCCC------
Confidence 99999998763 78999999999988531 22333 699999999 9999999999999997
Q ss_pred ccceeecceeEEEecccC-------------CCHHh-----------HHHHHHHHhcCCCCEEEEecCcchHHHHHHHHh
Q 007981 256 KSLVEFDNAKVLITDQKI-------------STVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMN 311 (582)
Q Consensus 256 ~~~~~~~n~kIll~~~~i-------------~~~~e-----------l~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n 311 (582)
|++.++||||+++++++ +++++ +.++++++.+.|+||||++++|++.|+++|.+|
T Consensus 230 -m~~~~~n~kI~ll~~~le~~~~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~ 308 (526)
T cd03339 230 -MPKEVKDAKIAILTCPFEPPKPKTKHKLDITSVEDYKKLQEYEQKYFREMVEQVKDAGANLVICQWGFDDEANHLLLQN 308 (526)
T ss_pred -CCceecCCCEEEEEecccCCccccceEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCHHHHHHHHHC
Confidence 56778899999998764 34444 456788999999999999999999999999988
Q ss_pred hhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---e--cccEEEEeCCCChHHHHHH
Q 007981 312 KIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---K--SNSTTIVADPYTKAEIQAR 385 (582)
Q Consensus 312 ~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~--~~~~~~~~~~~~~~~i~~r 385 (582)
++ .|||++ ++.+|+|||++|| .++++++++++++||+|+.|++ + +++++++++|+++
T Consensus 309 ~I------~av~~v-----~~~~LerIa~~tGa~ii~~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~i~g~~~~------ 371 (526)
T cd03339 309 GL------PAVRWV-----GGVEIELIAIATGGRIVPRFEDLSPEKLGKAGLVREISFGTTKDKMLVIEGCPNS------ 371 (526)
T ss_pred CC------EEEEeC-----CHHHHHHHHHHhCCEEecchhhCChhhcccCceEEEEEecCCCcEEEEEECCCCC------
Confidence 64 688765 4688999999999 8899999999999999999984 2 4688999988753
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHH
Q 007981 386 IMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLE 464 (582)
Q Consensus 386 i~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~ 464 (582)
+.+||+|||+|+.+++|+||+++||++++|+++++| +|||||++|++|+.
T Consensus 372 -----------------------------~~~TIllrG~t~~~l~E~er~l~DAl~~~~~~~~~~~vvpGGGa~e~~ls~ 422 (526)
T cd03339 372 -----------------------------KAVTIFIRGGNKMIIEEAKRSLHDALCVVRNLIRDNRIVYGGGAAEISCSL 422 (526)
T ss_pred -----------------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhhCCCEEeCCCHHHHHHHH
Confidence 579999999999999999999999999999999999 99999999999999
Q ss_pred HHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc-----CCCcceeecCCCcccccccCcccccH
Q 007981 465 HIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-----SDWRFGYNAMTGRYEDLLSAGVADPC 539 (582)
Q Consensus 465 ~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~-----~~~~~Gid~~~g~i~d~~~~gI~Dp~ 539 (582)
+|++++.+..+.+ ++++++|++||+.||++||+|||+|+.+++++|+. .+.++|||+.+|++.||++.|||||+
T Consensus 423 ~l~~~~~~~~~~~-~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~dp~ 501 (526)
T cd03339 423 AVEKAADKCSGIE-QYAMRAFADALESIPLALAENSGLNPIETLSEVKARQVKEKNPHLGIDCLGRGTNDMKEQKVFETL 501 (526)
T ss_pred HHHHHhccCCCHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCeEeeecCCCccCchhhcCceecH
Confidence 9999887777755 68999999999999999999999999999999983 25579999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHChhHHh
Q 007981 540 RVARCALQNAVSIAAVVLTTEAVL 563 (582)
Q Consensus 540 ~vk~~~l~~A~e~a~~iL~iD~iI 563 (582)
.||+++|+.|+++|++|||||++|
T Consensus 502 ~vk~~~l~~A~e~a~~iL~iD~ii 525 (526)
T cd03339 502 ISKKQQILLATQVVKMILKIDDVI 525 (526)
T ss_pred HHHHHHHHHHHHHHHHHhhhceec
Confidence 999999999999999999999987
No 14
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.8e-92 Score=782.96 Aligned_cols=460 Identities=23% Similarity=0.322 Sum_probs=418.1
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.+...|.+++..|+.||..|+++++|||||+||+|||++ .|+++|||||+||+++|+++||+ ++|++++|++||+
T Consensus 9 ~~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~Kmi~~~~G~~~ITnDG~TIlk~i~i~hP~----a~ll~~~a~~qd~ 84 (531)
T TIGR02347 9 AESLRRDAALMMNINAARGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLNEMQIQHPT----ASMIARAATAQDD 84 (531)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcCCCCCccceEEEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHHhhh
Confidence 457788999999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCccc---CCHHHHHHHHHHhcCC------
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPV---TGRDDIKAVASISAGN------ 200 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v---~~~~~L~~va~ts~~~------ 200 (582)
++||||||+||||++||+++.+++++|+||..|++||+.|++.+++.|++++.++ .+.+.|.++|+|++++
T Consensus 85 ~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~ 164 (531)
T TIGR02347 85 ITGDGTTSTVILIGELLKQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIKTEDEVDRELLLNVARTSLRTKLPIDL 164 (531)
T ss_pred hhcCcHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhccccchhh
Confidence 9999999999999999999999999999999999999999999999999999664 4788999999999875
Q ss_pred chhHHHHHHHHHHHhccCCc------EEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc
Q 007981 201 DEFIGNLIADAIIKIGADGV------ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (582)
Q Consensus 201 ~~~l~~li~~Av~~v~~~g~------I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~ 272 (582)
+++|++++++|+..+++++. |.+ ..|++..|+ ++++|++|+++|.||+ |+++++||+|++++++
T Consensus 165 ~~~ls~iv~~Av~~v~~~~~~i~~~~I~i~k~~g~s~~ds-~~v~Giv~~~~~~~~~-------~~~~~~n~~Ill~~~~ 236 (531)
T TIGR02347 165 ADQLTEIVVDAVLAIKKDGEQIDLFMVEIMEMKHKSATDT-TLIRGLVLDHGARHPD-------MPRRVKNAYILTCNVS 236 (531)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCChhHeEEEEecCCCcccc-EEEeeEEEecCcCCCC-------CceeccCceEEEEeCC
Confidence 78999999999999987653 343 578899998 9999999999999997 6778999999999999
Q ss_pred CCCHH-------------h-----------HHHHHHHHhcCC-------CC---EEEEecCcchHHHHHHHHhhhcccee
Q 007981 273 ISTVK-------------E-----------IVPLLEKTTQLS-------VP---LLIIAEDISSQVLETLVMNKIRGLLN 318 (582)
Q Consensus 273 i~~~~-------------e-----------l~~~le~i~~~~-------~~---lVI~~~~i~~~al~~L~~n~l~g~~~ 318 (582)
++..+ + +..+++++.+.+ ++ ||+|+++|++.++++|.+++
T Consensus 237 le~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I~~~a~~~L~~~~------ 310 (531)
T TIGR02347 237 LEYEKTEVNSGFFYSNAEQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGIDPPSLDLLAKEG------ 310 (531)
T ss_pred CCCCccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCccHHHHHHHHHCC------
Confidence 75432 2 234566676654 14 99999999999999999865
Q ss_pred EEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEE---EEecccEEEEeCCCChHHHHHHHHHHHHHHh
Q 007981 319 VAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKV---TVKSNSTTIVADPYTKAEIQARIMQIKKDLA 394 (582)
Q Consensus 319 v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v---~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~ 394 (582)
|+++++ +++.+|+|||++|| +++.+++++++++||+|+.| .+++++|++|++|+++
T Consensus 311 I~~i~r-----v~~~~le~ia~~tGa~~i~~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~--------------- 370 (531)
T TIGR02347 311 IMALRR-----AKRRNMERLTLACGGEALNSVEDLTPECLGWAGLVYETSIGEEKYTFIEEVKNP--------------- 370 (531)
T ss_pred ceEEcc-----CCHHHHHHHHHHhCCEEecccccCCccccccceEEEEEEECCeEEEEEEcCCCC---------------
Confidence 477764 45889999999999 88999999999999999999 5688899999988754
Q ss_pred hhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccC
Q 007981 395 ATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSM 473 (582)
Q Consensus 395 ~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~ 473 (582)
++|||+|||+|+.+++|++|+++||++++++++++| +||||||+|++|+.+|++++++.
T Consensus 371 --------------------~~~TI~lrG~t~~~l~E~er~l~DAl~v~~~~~~~~~vvpGGGa~E~~ls~~l~~~~~~~ 430 (531)
T TIGR02347 371 --------------------KSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIEDKCVVPGAGAFEIAAYCHLKEEKKSV 430 (531)
T ss_pred --------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhcC
Confidence 479999999999999999999999999999999999 99999999999999999998777
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHH
Q 007981 474 EDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNA 549 (582)
Q Consensus 474 ~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A 549 (582)
++.+ ++++++|++||+.||++||+|||+|+.+++.+|++. +.++|+|+.+|++.||++.|||||+.+|+++|++|
T Consensus 431 ~~~~-~~~i~~fa~ALe~ip~~La~NaG~d~~~vl~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gV~Dp~~vk~~al~~A 509 (531)
T TIGR02347 431 KGKA-KLGVEAFANALLVIPKTLAENSGLDAQDTLVKLEDEHDEGGEVVGVDLETGEPIDPEIKGIWDNYRVKKQLIQSA 509 (531)
T ss_pred CCHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeeeccCCCccchhhccCEEcHHHHHHHHHHH
Confidence 7765 689999999999999999999999999999999764 35799999999999999999999999999999999
Q ss_pred HHHHHHHHChhHHhcCCCCCC
Q 007981 550 VSIAAVVLTTEAVLADKIKQP 570 (582)
Q Consensus 550 ~e~a~~iL~iD~iI~~~~p~~ 570 (582)
+++|++|||||++|+.+ |+.
T Consensus 510 ~e~a~~iLrID~ii~~~-~~~ 529 (531)
T TIGR02347 510 TVIASQLLLVDEVMRAG-RSM 529 (531)
T ss_pred HHHHHHHHhHHHHHhCc-ccc
Confidence 99999999999999987 753
No 15
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2e-92 Score=783.99 Aligned_cols=473 Identities=22% Similarity=0.324 Sum_probs=426.7
Q ss_pred ecccccchhhHHhhcccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccch
Q 007981 34 LWRNQSRKMVAVVRAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTI 112 (582)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~ 112 (582)
+|+++|.|+.+..+....+...|.+++..|++||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~G~~~ITnDG~tIlk~l~~~hP~ 82 (532)
T TIGR02343 3 AFDEYGRPFIIIKDQDKKKRLKGLEAIKSNIAAAKSVASILRTSLGPKGMDKMLQSPDGDITVTNDGATILSQMDVDNPI 82 (532)
T ss_pred cccccCCCchhhccccccccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCCCCEEEeCcHHHHHHHccCCCHH
Confidence 68888888654444334568899999999999999999999999999999999999 99999999999999999999997
Q ss_pred hhHHhHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC----CHH
Q 007981 113 ENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT----GRD 188 (582)
Q Consensus 113 ~~~~akLl~~~a~~qd~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~~ 188 (582)
|+|++++|++||+++||||||+|+|+++||+++.+++++|+||..|++||+.|++.+++.|++++++++ +.+
T Consensus 83 ----akll~~~a~~qd~~~GDGTttvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~ 158 (532)
T TIGR02343 83 ----AKLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEEISDDNNNKE 158 (532)
T ss_pred ----HHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcCCCCHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999875 367
Q ss_pred HHHHHHHHhcCC------chhHHHHHHHHHHHhccC-------CcEE--EeCCCCcccceeeeeceEEecccCCcccccc
Q 007981 189 DIKAVASISAGN------DEFIGNLIADAIIKIGAD-------GVIL--IESSSSFETSIVVEEGMKIDKGYLSPQFITN 253 (582)
Q Consensus 189 ~L~~va~ts~~~------~~~l~~li~~Av~~v~~~-------g~I~--i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~ 253 (582)
.|.++|+|++++ .+.|++++++|+..+... +.|+ ...|++++|+ ++++|++|+++|.||+
T Consensus 159 ~l~~ia~t~l~sK~~~~~~~~ls~i~~~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds-~~v~Gi~i~~~~~~~~---- 233 (532)
T TIGR02343 159 PLIQAAKTSLGSKIVSKCHRRFAEIAVDAVLMVADMERRDVDFDLIKVEGKVGGSLEDT-KLIKGIIIDKDFSHPQ---- 233 (532)
T ss_pred HHHHHHHHhhccchhhHHHHHHHHHHHHHHHhhhhcCCCcCCHHHeeEEEecCCCcccc-eeEeeEEEecCcCCCC----
Confidence 899999999875 367899999999988531 1233 3689999999 9999999999999997
Q ss_pred ccccceeecceeEEEecccC-------------CCHHhH-----------HHHHHHHhcCCCCEEEEecCcchHHHHHHH
Q 007981 254 QEKSLVEFDNAKVLITDQKI-------------STVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLV 309 (582)
Q Consensus 254 ~~~~~~~~~n~kIll~~~~i-------------~~~~el-----------~~~le~i~~~~~~lVI~~~~i~~~al~~L~ 309 (582)
|++.++||||+++++++ ++++++ .++++++++.|++||||+++|++.++++|.
T Consensus 234 ---m~~~~~n~kI~l~~~~le~~~~~~~~~~~i~~~~~~~~~~~~E~~~l~~~l~~i~~~g~~lvi~~~~I~~~al~~L~ 310 (532)
T TIGR02343 234 ---MPKEVKDAKIAILTCPFEPPKPKTKHKLDISSVEEYKKLQKYEQQKFAEMIDDIKKSGANIVICQWGFDDEANHLLL 310 (532)
T ss_pred ---CCeeecCCcEEEEEeeccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCccHHHHHHHH
Confidence 67788999999999764 455555 567889999999999999999999999999
Q ss_pred HhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ec--ccEEEEeCCCChHHHH
Q 007981 310 MNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KS--NSTTIVADPYTKAEIQ 383 (582)
Q Consensus 310 ~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~--~~~~~~~~~~~~~~i~ 383 (582)
.|++ .+||+++ +.+|+|||++|| +++++++++++++||+|+.|+. +. ++++++++|+++
T Consensus 311 ~~~i------~~v~~~~-----~~~l~~Ia~~tGa~~i~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~i~~~~~~---- 375 (532)
T TIGR02343 311 QNDL------PAVRWVG-----GHELELIAIATGGRIVPRFEELSEDKLGKAGLVREISFGTTKDRMLVIEQCKNS---- 375 (532)
T ss_pred HCCc------EEEEcCC-----HHHHHHHHHHhCCEEecccccCCHhHCcccceEEEEEecCCcceEEEEECCCCC----
Confidence 9864 6777554 678999999999 8899999999999999999984 33 578999988754
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHH
Q 007981 384 ARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHL 462 (582)
Q Consensus 384 ~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~ 462 (582)
..+||+|||+|+.+++|.||+++||+++++++++++ +||||||+|++|
T Consensus 376 -------------------------------~~~TIllrG~t~~~l~E~er~l~DAl~~v~~~i~~~~vvpGGGa~e~~l 424 (532)
T TIGR02343 376 -------------------------------KAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLIKNSRIVYGGGAAEISC 424 (532)
T ss_pred -------------------------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHH
Confidence 379999999999999999999999999999999996 999999999999
Q ss_pred HHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc-----CCCcceeecCCCcccccccCcccc
Q 007981 463 LEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-----SDWRFGYNAMTGRYEDLLSAGVAD 537 (582)
Q Consensus 463 s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~-----~~~~~Gid~~~g~i~d~~~~gI~D 537 (582)
+++|++++.++.+.+ ++++++|++||+.||++||+|||+|+.+++++|++ .+.++|+|+.+|++.||++.||||
T Consensus 425 s~~l~~~~~~~~~~~-~~~i~~fa~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~D 503 (532)
T TIGR02343 425 SLAVSQEADKYSGVE-QYAIRAFADALEEIPMALAENSGLDPIGTLSDLKSLQMKEKNPHLGVDCLGDGTNDMKEQGVFE 503 (532)
T ss_pred HHHHHHHhccCCcHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCccCeeCCCCccccchhccCee
Confidence 999999987777765 68999999999999999999999999999999985 256799999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHChhHHhcC
Q 007981 538 PCRVARCALQNAVSIAAVVLTTEAVLAD 565 (582)
Q Consensus 538 p~~vk~~~l~~A~e~a~~iL~iD~iI~~ 565 (582)
|+.||+++|+.|+++|++||+||++|.+
T Consensus 504 p~~vk~~al~~A~e~a~~iL~id~ii~~ 531 (532)
T TIGR02343 504 TLIGKKQQIQLATQLVRMILKIDDVISP 531 (532)
T ss_pred cHHHHHHHHHHHHHHHHHHHhHhhhccC
Confidence 9999999999999999999999999954
No 16
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=5.9e-93 Score=780.39 Aligned_cols=451 Identities=22% Similarity=0.319 Sum_probs=415.3
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.....|.+++..|+.||..++++++|||||+||+|||++ .|+++|||||+|||++|+++||+ ++|++++|++||+
T Consensus 5 ~~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----a~l~~~~a~~qd~ 80 (484)
T cd03342 5 AEVLRRGQALAVNISAAKGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLSEMQIQHPT----ASMIARAATAQDD 80 (484)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEECCCCCEEEeccHHHHHHhccCcCHH----HHHHHHHHHHhhh
Confidence 356788999999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC---CHHHHHHHHHHhcCCc-----
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT---GRDDIKAVASISAGND----- 201 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~---~~~~L~~va~ts~~~~----- 201 (582)
++||||||++|||++||+++.+++++|+||..|++||++|.+.+++.|++++.+++ +.+.|.++|++|++++
T Consensus 81 ~~GDGTTt~vvLa~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~l~~va~ts~~sk~~~~~ 160 (484)
T cd03342 81 ITGDGTTSNVLLIGELLKQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVPVEIDTDRELLLSVARTSLRTKLHADL 160 (484)
T ss_pred HhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhCcccchhH
Confidence 99999999999999999999999999999999999999999999999999999997 7889999999999875
Q ss_pred -hhHHHHHHHHHHHhccCC-c-----E--EEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc
Q 007981 202 -EFIGNLIADAIIKIGADG-V-----I--LIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (582)
Q Consensus 202 -~~l~~li~~Av~~v~~~g-~-----I--~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~ 272 (582)
+.|++++++|+..+++++ . | ....|+++.|+ ++++|++|+++|.||+ |+++++||+|++++++
T Consensus 161 ~~~l~~l~~~A~~~v~~~~~~~~~~~I~i~ki~ggs~~ds-~~i~G~~~~~~~~~~~-------m~~~~~n~~Ill~~~~ 232 (484)
T cd03342 161 ADQLTEIVVDAVLAIYKPDEPIDLHMVEIMQMQHKSDSDT-KLIRGLVLDHGARHPD-------MPKRVENAYILTCNVS 232 (484)
T ss_pred HHHHHHHHHHHHHHHhhcCCccChhHeEEEEecCCChhhc-eEEeeEEEecCCCCCC-------CCccccCceEEEEeCC
Confidence 899999999999998765 2 2 23578999998 9999999999999997 5788999999999999
Q ss_pred CCCHHh-HHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Ccccccc
Q 007981 273 ISTVKE-IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLA 350 (582)
Q Consensus 273 i~~~~e-l~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~ 350 (582)
++..+. +...+ -.+||||+++|++.++++|.+|+ |+|||+ +++++|+|||++|| +++++++
T Consensus 233 le~~~~~~~~~~------~~~lvi~~~~I~~~al~~l~~~~------I~av~~-----~~~~~l~~ia~~tGa~ii~~l~ 295 (484)
T cd03342 233 LEYEKTEVNSGF------FYSVVINQKGIDPPSLDMLAKEG------ILALRR-----AKRRNMERLTLACGGVAMNSVD 295 (484)
T ss_pred CCCCccccCcEE------EEEEEEeCCCccHHHHHHHHHCC------CeEEEe-----CCHHHHHHHHHHhCCEEecccc
Confidence 987654 22111 14699999999999999999885 588875 45889999999999 8999999
Q ss_pred CCCccccceeeEE---EEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHh
Q 007981 351 GATSDQLGIARKV---TVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEV 427 (582)
Q Consensus 351 ~l~~~~lG~~~~v---~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~ 427 (582)
++++++||+|+.| .+++++|+++++|+++ +.+||+|||+|+.
T Consensus 296 ~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~-----------------------------------~~~tI~lrg~t~~ 340 (484)
T cd03342 296 DLSPECLGYAGLVYERTLGEEKYTFIEGVKNP-----------------------------------KSCTILIKGPNDH 340 (484)
T ss_pred cCChhhCcccceEEEEEECCeEEEEEECCCCC-----------------------------------cEEEEEEeCCCHH
Confidence 9999999999999 4678899999998754 4899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 007981 428 ELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTI 506 (582)
Q Consensus 428 ~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~ 506 (582)
+++|.||+++||++++++++++| +||||||+|++|+.+|++++.+.++.+ ++++++|++||+.||++||+|||+|+.+
T Consensus 341 ~l~E~er~l~DAl~~vk~~~~~~~~vpGGGa~e~~ls~~L~~~~~~~~~~~-~~~i~~~a~Al~~ip~~La~NaG~d~~~ 419 (484)
T cd03342 341 TITQIKDAIRDGLRAVKNAIEDKCVVPGAGAFEVALYAHLKEFKKSVKGKA-KLGVQAFADALLVIPKTLAENSGLDVQE 419 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHHHhhcCCCHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999 999999999999999999987766754 6999999999999999999999999999
Q ss_pred HHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCC
Q 007981 507 VVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADK 566 (582)
Q Consensus 507 vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~ 566 (582)
++.+|++. ++++|||+.+|++.||++.|||||+.+|+++|++|+++|++|||||++|+.+
T Consensus 420 ~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~ID~ii~~~ 483 (484)
T cd03342 420 TLVKLQDEYAEGGQVGGVDLDTGEPMDPESEGIWDNYSVKRQILHSATVIASQLLLVDEIIRAG 483 (484)
T ss_pred HHHHHHHHHHccCCceeeeCCCCcccchhhcCcEEcHHHHHHHHHHHHHHHHHHhhhhHhhhcC
Confidence 99999853 5679999999999999999999999999999999999999999999999764
No 17
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=6.7e-92 Score=779.41 Aligned_cols=456 Identities=26% Similarity=0.399 Sum_probs=419.3
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
..+..+|.+++..|++||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||. |+|++++|++||
T Consensus 8 ~~~~~~~~~~~~~ni~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~qd 83 (519)
T TIGR02339 8 GTQRTKGRDAQRNNIAAAKAVAEAVKSTLGPRGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQD 83 (519)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeECCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHHHH
Confidence 3457788999999999999999999999999999999999 99999999999999999999995 999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCCc-----
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGND----- 201 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~~----- 201 (582)
+++||||||+|+|+++||+++.+++++|+||..|++||++|++.+++.|+++++|++ +.+.|.++|+||++++
T Consensus 84 ~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~v~~~~~~~L~~ia~tsl~sk~~~~~ 163 (519)
T TIGR02339 84 AEVGDGTTTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATKISPEDRDLLKKVAETSLTGKASAEV 163 (519)
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcccHHHHHHHHHhhhccccccch
Confidence 999999999999999999999999999999999999999999999999999999986 3688999999999875
Q ss_pred --hhHHHHHHHHHHHhcc---CCc-------EEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEE
Q 007981 202 --EFIGNLIADAIIKIGA---DGV-------ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVL 267 (582)
Q Consensus 202 --~~l~~li~~Av~~v~~---~g~-------I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIl 267 (582)
+.|++++++|+.++++ +|. |++ ..|++++|+ ++++|++|+++|.||. |+++++||+|+
T Consensus 164 ~~~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~vi~~~~~~~~-------m~~~i~n~kIl 235 (519)
T TIGR02339 164 TKDKLANLVVEAVKQVAEKRGDGKYYVDLDNIKIEKKTGGSIDDT-ELVEGIVVDKEPVHPG-------MPKRVKNAKIA 235 (519)
T ss_pred hHHHHHHHHHHHHHHHhhhccCCCcccCHHHeEEEEccCcChhcc-eeEeeEEEecCCCCCC-------CccccCCCcEE
Confidence 7899999999999985 453 334 689999998 9999999999999984 78899999999
Q ss_pred Eeccc-------------CCCHHhHHHHHH-----------HHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEe
Q 007981 268 ITDQK-------------ISTVKEIVPLLE-----------KTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVK 323 (582)
Q Consensus 268 l~~~~-------------i~~~~el~~~le-----------~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk 323 (582)
+++++ +++++++.++++ ++++.|++|||++++|++.++++|.+++ +.+|+
T Consensus 236 ll~~~Le~~~~~~~~~~~i~~~~~~~~~l~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~g------I~~v~ 309 (519)
T TIGR02339 236 LLDAPLEVEKTEIDAKIRITDPDQIKKFLDQEEAMLKEMVDKIADAGANVVFCQKGIDDLAQHYLAKAG------ILAVR 309 (519)
T ss_pred EEeccccccccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCCccHHHHHHHHHCC------CEEEe
Confidence 99998 567777666554 8999999999999999999999997654 35665
Q ss_pred CCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEEe---cccEEEEeCCCChHHHHHHHHHHHHHHhhhchH
Q 007981 324 CPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATDNA 399 (582)
Q Consensus 324 ~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~~---~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~ 399 (582)
++++.+|+|||++|| +++++++++++++||+|+.|++. ++++++|++|+++
T Consensus 310 -----~v~~~~L~rIa~~tGa~ii~~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~-------------------- 364 (519)
T TIGR02339 310 -----RVKKSDIEKLARATGAKIVSSIKEITESDLGYAGLVEERKVGDDKMTFVEGCKNP-------------------- 364 (519)
T ss_pred -----cCCHHHHHHHHHHhCCEEeCchhhCChhhccCCceEEEEEECCeEEEEEEcCCCC--------------------
Confidence 556899999999999 88899999999999999999874 4899999988654
Q ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhh
Q 007981 400 YLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDE 478 (582)
Q Consensus 400 ~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq 478 (582)
..+||+|||+|+.+++|.+|+++||++++|+++++| +|||||++|++|+++|++++.+..+.+
T Consensus 365 ---------------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~- 428 (519)
T TIGR02339 365 ---------------KAVTILLRGGTEHVVDELERSIQDALHVVASALEDGKVVAGGGAVEIELALRLRSYARKIGGRE- 428 (519)
T ss_pred ---------------CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEeeCCCHHHHHHHHHHHHHhhcCCCHH-
Confidence 379999999999999999999999999999999999 999999999999999999887766665
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc----CCCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHH
Q 007981 479 QIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAA 554 (582)
Q Consensus 479 ~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~ 554 (582)
++++++|++||+.||++||+|||+|+.+++.+|++ .+.++|||+.+|++.||++.|||||+.+|+++|+.|+++|+
T Consensus 429 ~~~~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~ 508 (519)
T TIGR02339 429 QLAIEAFADALEEIPRILAENAGLDPIDALVELRAKHEKGNKNAGINVFTGEIEDMLELGVIEPLRVKEQAIKSATEAAT 508 (519)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHccCCceeEEcCCCCccchhhccceEcHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999984 35679999999999999999999999999999999999999
Q ss_pred HHHChhHHhc
Q 007981 555 VVLTTEAVLA 564 (582)
Q Consensus 555 ~iL~iD~iI~ 564 (582)
+||+||++|+
T Consensus 509 ~iL~id~ii~ 518 (519)
T TIGR02339 509 MILRIDDVIA 518 (519)
T ss_pred HHHhHhHHhh
Confidence 9999999985
No 18
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=8.1e-92 Score=779.06 Aligned_cols=456 Identities=24% Similarity=0.392 Sum_probs=421.1
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.+..+|.+++..|++||..+++++++||||+||+|||++ .|+++|||||+||+++|+++||. |+|++++|++||+
T Consensus 8 ~~~~~~~~~~~~n~~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~~ 83 (517)
T cd03343 8 TQRTSGRDAQRMNIAAAKAVAEAVRTTLGPKGMDKMLVDSLGDVTITNDGATILKEMDIEHPA----AKMLVEVAKTQDE 83 (517)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCceeEcCCCCEEEEccHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 357789999999999999999999999999999999999 99999999999999999999995 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCCc------
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGND------ 201 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~~------ 201 (582)
++||||||+|+|+++|++++.+++++|+||..|++||++|++.+++.|++++.+++ +.+.|.++|+||++++
T Consensus 84 ~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~va~ts~~sk~~~~~~ 163 (517)
T cd03343 84 EVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVDPDDKDTLRKIAKTSLTGKGAEAAK 163 (517)
T ss_pred HhCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhhcccchhhHH
Confidence 99999999999999999999999999999999999999999999999999999996 7889999999999876
Q ss_pred hhHHHHHHHHHHHhccCCc---------EEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEec
Q 007981 202 EFIGNLIADAIIKIGADGV---------ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (582)
Q Consensus 202 ~~l~~li~~Av~~v~~~g~---------I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~ 270 (582)
+.|++++++|+.++++++. |++ +.|++++|+ ++++|++|+++|.||+ |++.++||+|++++
T Consensus 164 ~~l~~l~~~A~~~v~~~~~~~~~~~~~~I~i~k~~Ggs~~ds-~lv~G~v~~~~~~~~~-------m~~~~~n~~Illl~ 235 (517)
T cd03343 164 DKLADLVVDAVLQVAEKRDGKYVVDLDNIKIEKKTGGSVDDT-ELIRGIVIDKEVVHPG-------MPKRVENAKIALLD 235 (517)
T ss_pred HHHHHHHHHHHHHhhhccCCCccccHHHeeEEeecCcCHHHc-ceeeeEEEeccCCCCC-------CccccCCCcEEEEe
Confidence 8999999999999987542 666 789999998 9999999999999997 56789999999999
Q ss_pred cc-------------CCCHHhHHH-----------HHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCC
Q 007981 271 QK-------------ISTVKEIVP-----------LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (582)
Q Consensus 271 ~~-------------i~~~~el~~-----------~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~ 326 (582)
++ +++++++.+ +++++++.|+||||++++|++.++++|.+++ +++|+
T Consensus 236 ~~Le~~k~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~l~~~g------I~~v~--- 306 (517)
T cd03343 236 APLEVKKTEIDAKIRITSPDQLQAFLEQEEAMLKEMVDKIADTGANVVFCQKGIDDLAQHYLAKAG------ILAVR--- 306 (517)
T ss_pred ccccCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHCC------cEEEE---
Confidence 98 466666654 4558999999999999999999999998653 35776
Q ss_pred cCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEEe---cccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHH
Q 007981 327 FGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLS 402 (582)
Q Consensus 327 ~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~~---~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~ 402 (582)
++++++|+|||++|| +++++++++++++||+|+.|++. ++++++|++|+++
T Consensus 307 --~v~~~~l~~Ia~~tGa~ii~~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~----------------------- 361 (517)
T cd03343 307 --RVKKSDMEKLARATGAKIVTNIDDLTPEDLGEAELVEERKVGDDKMVFVEGCKNP----------------------- 361 (517)
T ss_pred --eCCHHHHHHHHHHhCCEEecchhhCChhhCCccceEEEEEECCeEEEEEEcCCCC-----------------------
Confidence 556899999999999 88999999999999999999864 8899999988754
Q ss_pred HHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHH
Q 007981 403 RKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIG 481 (582)
Q Consensus 403 ~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~ 481 (582)
..+||+|||+|+.+++|++|+++||++++|+++++| +|||||++|++|+.+|++++.+.++.+ +++
T Consensus 362 ------------~~~TI~lrG~t~~~l~e~~~~l~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~L~~~~~~~~~~~-~~~ 428 (517)
T cd03343 362 ------------KAVTILLRGGTEHVVDELERALEDALRVVADALEDGKVVAGGGAVEIELAKRLREYARSVGGRE-QLA 428 (517)
T ss_pred ------------ceEEEEEECCcHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCHHHHHHHHHHHHHHhcCCCHH-HHH
Confidence 368999999999999999999999999999999999 999999999999999999877666654 689
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc----CCCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHH
Q 007981 482 ADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVL 557 (582)
Q Consensus 482 i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL 557 (582)
+++|++||+.||++||+|||+|+.+++.+|++ .+.++|||+.+|++.||++.|||||+.+|+++|+.|+|+|++||
T Consensus 429 ~~~~~~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL 508 (517)
T cd03343 429 VEAFADALEEIPRTLAENAGLDPIDTLVELRAAHEKGNKNAGLDVYTGEVVDMLEKGVIEPLRVKKQAIKSATEAATMIL 508 (517)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeecCCCCccchhhcCceecHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999984 35679999999999999999999999999999999999999999
Q ss_pred ChhHHhcC
Q 007981 558 TTEAVLAD 565 (582)
Q Consensus 558 ~iD~iI~~ 565 (582)
+||++|+.
T Consensus 509 ~id~ii~~ 516 (517)
T cd03343 509 RIDDVIAA 516 (517)
T ss_pred hhhHhhhC
Confidence 99999975
No 19
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=6.9e-92 Score=780.23 Aligned_cols=456 Identities=25% Similarity=0.340 Sum_probs=414.1
Q ss_pred hcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhc
Q 007981 53 ILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLA 131 (582)
Q Consensus 53 ~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e~ 131 (582)
...|.+++..|++||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||+ |+|++++|++||+++
T Consensus 3 ~~~~~~~~~~ni~a~~~l~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~q~~~~ 78 (527)
T cd03335 3 RTSGQDVRTQNVTAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDKEV 78 (527)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeCcHHHHHHhccccChH----HHHHHHHHHHHHHHh
Confidence 4567899999999999999999999999999999999 99999999999999999999997 999999999999999
Q ss_pred CCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHc-cCcccC--CHHHHHHHHHHhcCC------ch
Q 007981 132 GDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQ-KSFPVT--GRDDIKAVASISAGN------DE 202 (582)
Q Consensus 132 GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~~~L~~va~ts~~~------~~ 202 (582)
||||||+|||+++||+++.+++++|+||..|++||++|++.+++.|++ +++|++ +.+.|.++|+|++++ .+
T Consensus 79 GDGTTt~vvLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~ 158 (527)
T cd03335 79 GDGTTSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVDNLGKESLINVAKTSMSSKIIGADSD 158 (527)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhcccccchhHH
Confidence 999999999999999999999999999999999999999999999996 899987 788999999999873 48
Q ss_pred hHHHHHHHHHHHhcc---CCc-------EE--EeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEec
Q 007981 203 FIGNLIADAIIKIGA---DGV-------IL--IESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (582)
Q Consensus 203 ~l~~li~~Av~~v~~---~g~-------I~--i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~ 270 (582)
.|++++++|+..++. +|. |+ ...|++++|+ ++++|++|+++|.||. |+++++||+|++++
T Consensus 159 ~ls~l~~~A~~~v~~~~~~~~~~~~~~~I~i~~~~Ggs~~~s-~li~Givi~~~~~~~~-------m~~~i~n~kIlll~ 230 (527)
T cd03335 159 FFANMVVDAILAVKTTNEKGKTKYPIKAVNILKAHGKSAKES-YLVNGYALNCTRASQG-------MPTRVKNAKIACLD 230 (527)
T ss_pred HHHHHHHHHHHHhhcccccCCCccCHHHeEEEEecCcChhhc-ceeeeEEEecccCCCC-------CcccccCCcEEEEe
Confidence 999999999999952 232 22 4689999998 9999999999999984 88899999999999
Q ss_pred ccCCCH-------------Hh-----------HHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCC
Q 007981 271 QKISTV-------------KE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (582)
Q Consensus 271 ~~i~~~-------------~e-----------l~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~ 326 (582)
++++.. ++ +.++++++.+.|++|||++++|++.++++|.++. +++++
T Consensus 231 ~~Le~~~~~~~~~~~~~~~~~le~~~~~E~~~l~~~i~~i~~~g~~lvi~~k~I~d~al~~L~~~~------I~~v~--- 301 (527)
T cd03335 231 FNLQKTKMKLGVQVVVTDPEKLEKIRQRESDITKERIKKILAAGANVVLTTGGIDDMCLKYFVEAG------AMAVR--- 301 (527)
T ss_pred ccCCCCccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHCC------cEEEE---
Confidence 997642 22 2356788889999999999999999999999874 46765
Q ss_pred cCCCcHHHHHHHHHHhC-CccccccCC------CccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHHHhhh
Q 007981 327 FGDGKKALLQDIALMTG-ELGLTLAGA------TSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAAT 396 (582)
Q Consensus 327 ~~~~~~~~Le~ia~~tG-~i~~~l~~l------~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~ 396 (582)
++++.+|+|||++|| +++++++++ ++++||+|+.|+ ++++++++|++|+++
T Consensus 302 --~v~~~~lerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~~~~----------------- 362 (527)
T cd03335 302 --RVKKEDLRRIAKATGATLVSTLANLEGEETFDPSYLGEAEEVVQERIGDDELILIKGTKKR----------------- 362 (527)
T ss_pred --eCCHHHHHHHHHHhCCEEecChhhcCcccccCHhhCccCceEEEEEECCeEEEEEEcCCCC-----------------
Confidence 556899999999999 777776544 455899999999 678899999988653
Q ss_pred chHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCC
Q 007981 397 DNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMED 475 (582)
Q Consensus 397 ~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~ 475 (582)
++|||+|||+|+.+++|.+|+++||++++++++++| +|||||++|++|+.+|++++.+..+
T Consensus 363 ------------------~~~TIllrG~t~~~l~e~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~L~~~~~~~~~ 424 (527)
T cd03335 363 ------------------SSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGS 424 (527)
T ss_pred ------------------CEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhccCc
Confidence 589999999999999999999999999999999999 9999999999999999999877766
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC------------CCcceeecCCCcccccccCcccccHHHHH
Q 007981 476 PDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS------------DWRFGYNAMTGRYEDLLSAGVADPCRVAR 543 (582)
Q Consensus 476 ~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~------------~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~ 543 (582)
.+ ++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.+|+
T Consensus 425 ~~-~~~i~~~a~aL~~ip~~La~NaG~d~~~~~~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~~k~ 503 (527)
T cd03335 425 RE-QLAIAEFAEALLVIPKTLAVNAAKDATELVAKLRAYHAAAQVKPDKKHLKWYGLDLINGKVRDNLEAGVLEPTVSKI 503 (527)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCccccccCceEeEECCCCcccchhhccceecHHHHH
Confidence 65 589999999999999999999999999999999772 34789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHChhHHhcCCCC
Q 007981 544 CALQNAVSIAAVVLTTEAVLADKIK 568 (582)
Q Consensus 544 ~~l~~A~e~a~~iL~iD~iI~~~~p 568 (582)
++|+.|+|+|++|||||++|..+ |
T Consensus 504 ~~i~~A~e~a~~iLrID~ii~~~-~ 527 (527)
T cd03335 504 KSLKFATEAAITILRIDDLIKLN-P 527 (527)
T ss_pred HHHHHHHHHHHHHHhhcceeecC-C
Confidence 99999999999999999999876 5
No 20
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.8e-91 Score=775.58 Aligned_cols=461 Identities=21% Similarity=0.316 Sum_probs=415.2
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007981 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (582)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e 130 (582)
+...|.+++..|+.||..++++++|||||+||+|||++ .|+++|||||+|||++|+++||+ |+|++++|++||++
T Consensus 2 ~~~~~~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hp~----a~ll~~~a~~q~~~ 77 (515)
T cd03338 2 DKEKPADVRLSNIQAAKAVADAIRTSLGPRGMDKMIQTGKGEVIITNDGATILKQMSVLHPA----AKMLVELSKAQDIE 77 (515)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeeCCCCCEEEECcHHHHHHhCcCcCHH----HHHHHHHHHHHHhH
Confidence 34567789999999999999999999999999999999 99999999999999999999997 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCC------ch
Q 007981 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------DE 202 (582)
Q Consensus 131 ~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~------~~ 202 (582)
+||||||+|||+++|++++.+++++|+||..|++||++|.+.+++.|++++.+++ +.+.|.++|+||+++ ++
T Consensus 78 ~GDGTtt~vvLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~~~~l~~va~ts~~sK~~~~~~~ 157 (515)
T cd03338 78 AGDGTTSVVVLAGALLSACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIPVDLNDRESLIKSATTSLNSKVVSQYSS 157 (515)
T ss_pred hcCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHhccccchhhHH
Confidence 9999999999999999999999999999999999999999999999999999986 788999999999984 58
Q ss_pred hHHHHHHHHHHHhccCCc----------EEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc
Q 007981 203 FIGNLIADAIIKIGADGV----------ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (582)
Q Consensus 203 ~l~~li~~Av~~v~~~g~----------I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~ 272 (582)
.|++++++|+.++++++. |..+.|++++|+ ++++|++|+++|.||++ ||+.++||++++++++
T Consensus 158 ~ls~li~~A~~~v~~~~~~~~~d~~~i~i~~~~Ggs~~ds-~lv~Giv~~k~~~~~~~------~p~~i~n~ki~ll~~~ 230 (515)
T cd03338 158 LLAPIAVDAVLKVIDPATATNVDLKDIRIVKKLGGTIEDT-ELVDGLVFTQKASKKAG------GPTRIEKAKIGLIQFC 230 (515)
T ss_pred HHHHHHHHHHHHhhcccccCcCCHHHeEEEEecCCChhhc-eeeeeEEEeccccCcCC------CCccccCCcEEEEecc
Confidence 899999999999988653 555789999999 99999999999999852 4777899999999887
Q ss_pred CCC-------------H-----------HhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcC
Q 007981 273 IST-------------V-----------KEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFG 328 (582)
Q Consensus 273 i~~-------------~-----------~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~ 328 (582)
++. . +++.++++.+++.|++||||+++|++++++.+..|.+++ .+|+||+
T Consensus 231 le~~~~~~~~~~~i~~~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~i~~~~v~~l~~~~l~~-~~I~av~----- 304 (515)
T cd03338 231 LSPPKTDMDNNIVVNDYAQMDRILREERKYILNMCKKIKKSGCNVLLIQKSILRDAVSDLALHFLAK-LKIMVVK----- 304 (515)
T ss_pred ccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHHH-CCceEEe-----
Confidence 532 2 234567889999999999999999544444444444433 4578887
Q ss_pred CCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHH
Q 007981 329 DGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRK 404 (582)
Q Consensus 329 ~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~ 404 (582)
++++.+|+|||++|| +++++++++++++||+|+.|++ +++++++++++.+
T Consensus 305 ~~~~~~LerIa~~tGa~ii~sl~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~-------------------------- 358 (515)
T cd03338 305 DIEREEIEFICKTIGCKPVASIDHFTEDKLGSADLVEEVSLGDGKIVKITGVKN-------------------------- 358 (515)
T ss_pred cCCHHHHHHHHHHHCCEEecccccCCHhhCCCCceEEEEEECCeEEEEEEecCC--------------------------
Confidence 566899999999999 8899999999999999999986 4557888888753
Q ss_pred HHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHH
Q 007981 405 LSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGAD 483 (582)
Q Consensus 405 l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~ 483 (582)
+++.|||+|||+|+.+++|++|+++||++++++++++| +|||||++|++|+++|++++.+..+.+ +++++
T Consensus 359 --------~~~~~TIllrG~t~~~l~e~~r~i~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~-~~~~~ 429 (515)
T cd03338 359 --------PGKTVTILVRGSNKLVLDEAERSLHDALCVIRCLVKKRALIPGGGAPEIEIALQLSEWARTLTGVE-QYCVR 429 (515)
T ss_pred --------CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECCCHHHHHHHHHHHHHhccCCcHH-HHHHH
Confidence 13689999999999999999999999999999999999 999999999999999999877666654 68999
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHhhc----CCCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHCh
Q 007981 484 IVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTT 559 (582)
Q Consensus 484 ~~a~AL~~ip~~La~NaG~d~~~vl~kl~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~i 559 (582)
+|++||+.||++||+|||+|+.+++.+|++ .+.++|||+.+|++.||++.|||||+.+|+++++.|+++|++||+|
T Consensus 430 ~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~~l~~A~~~a~~iL~I 509 (515)
T cd03338 430 AFADALEVIPYTLAENAGLNPISIVTELRNRHAQGEKNAGINVRKGAITNILEENVVQPLLVSTSAITLATETVRMILKI 509 (515)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCccceeccCCCccchhhcCceecHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999987 3668999999999999999999999999999999999999999999
Q ss_pred hHHhc
Q 007981 560 EAVLA 564 (582)
Q Consensus 560 D~iI~ 564 (582)
|++|+
T Consensus 510 D~ii~ 514 (515)
T cd03338 510 DDIVL 514 (515)
T ss_pred chhhc
Confidence 99986
No 21
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.8e-93 Score=778.03 Aligned_cols=497 Identities=43% Similarity=0.614 Sum_probs=416.4
Q ss_pred ccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
+.+.+.||.++|..|+.|++.++++||+||||+||||||++ .|+++|||||+|||++|+++|| ||||++++|++|
T Consensus 2 ~~~~~~~~~~a~~~~~~~~~~la~~vkttLGPkG~~k~l~~~~g~~~iTnDG~tIlkeielehp----~akll~eva~~q 77 (524)
T COG0459 2 MGKERKFGEDARRSNIRAARALADAVKTTLGPKGRNKMLVDSGGDITITNDGVTILKEIELEHP----GAKLLVEVAKKQ 77 (524)
T ss_pred CcccccccHHHHHHHHHHHHHHHHHHHhccCCCcCceEEecCCCCEEEecCcceehhhhhccCc----hhHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999 8899999999999999999999 699999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHH-----HHHHHHHHhcCCch
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRD-----DIKAVASISAGNDE 202 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~-----~L~~va~ts~~~~~ 202 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++++++.+ ...++++.++++++
T Consensus 78 d~e~GDGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~~~~~~~~~~~t~v~sk~~~~~~ 157 (524)
T COG0459 78 DDEAGDGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVSDSEEELKIAITSVASKSANSDE 157 (524)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhhhhhhheeeeeeccChH
Confidence 9999999999999999999999999999999999999999999999999999999998654 33344444455568
Q ss_pred hHHHHHHHHHHHhcc-----CCcEEEe-CCCCcccceeeeeceEEecccCCccccccccccc-eeecceeEEEecccCCC
Q 007981 203 FIGNLIADAIIKIGA-----DGVILIE-SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSL-VEFDNAKVLITDQKIST 275 (582)
Q Consensus 203 ~l~~li~~Av~~v~~-----~g~I~i~-~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~-~~~~n~kIll~~~~i~~ 275 (582)
.+++++++|+.+++. ++++.++ .|++..|+ ++++||+||+||.+||| |+ +.++||+|+++|++|++
T Consensus 158 ~i~~lv~~Av~~v~~~~~d~~~i~~vk~~gg~~~e~-~vveG~~~dkg~~s~~~------~~~~~~e~~~Ili~d~~l~~ 230 (524)
T COG0459 158 EIGELVVEAVEKVGKEQSDLDGIIIVKESGGSETEL-EVVEGMVFDKGYLSPYF------MPDKRLENPKILLLDKKLEI 230 (524)
T ss_pred HHHHHHHHHHHHhcccccccCCeEEEEecCCCccce-EEEeeEEecCCccCCCC------CCccccccceEEEEcccccc
Confidence 999999999999998 7777665 55555665 99999999999999997 66 78999999999999887
Q ss_pred HHhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc-cccCCC
Q 007981 276 VKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL-TLAGAT 353 (582)
Q Consensus 276 ~~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~-~l~~l~ 353 (582)
.++.++ ++...+.+.+++++++++..+++..++.|.+++..++++|+.|||+|.++..|+|++++|+ +... .+. ..
T Consensus 231 ~k~~l~-~e~~i~~~~~l~~i~e~ee~e~l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~Ilt~~~v~~~dl~-~~ 308 (524)
T COG0459 231 KKPELP-LEIVISSGKPLLIIAEDEEGEALATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIAILTGRRVKKEDLG-ER 308 (524)
T ss_pred ccccCc-ceeEecCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhcceecceecchhhH-HH
Confidence 776665 5555555556666666666666666666666666666666666666666666666666666 2211 111 13
Q ss_pred ccccceeeEEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhh-chHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHH
Q 007981 354 SDQLGIARKVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAAT-DNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDR 432 (582)
Q Consensus 354 ~~~lG~~~~v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~-~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~ 432 (582)
...+|.|..|...++.+....|.+. ..++++. .++|+++++++|.++ .+++|||+|||+|+.+++|+
T Consensus 309 l~~~~ga~~v~~~~d~t~~~~G~~~-----------~~~ve~~~~~~~~~~~~~~~~~~-~~~~~tI~vrgate~~ldE~ 376 (524)
T COG0459 309 LAKLGGAKIVSVLKDLTTIVLGEGA-----------AGLVEETKTGDYDMEKLQERKAK-AGGVATILVRGATEVELDEK 376 (524)
T ss_pred HHHccCceEEeecccCceeecCccc-----------cceEEEeeccchhhhhhhhhhhc-CCCeEEEEECCccHhHHHHH
Confidence 4555666666655555544444220 1122233 567888889999888 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHh
Q 007981 433 KLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKT 511 (582)
Q Consensus 433 ~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl 511 (582)
+|++||||+++|+++++| +|||||++|++++..|++++.+.++.++++|+++|++||+.||++||+|||+||++++.+|
T Consensus 377 er~i~DAL~~~~~ave~g~iV~GGGa~e~~~a~~L~~~~~~~~g~~e~~~i~~~a~Ale~ip~~La~NaG~d~~~v~~~L 456 (524)
T COG0459 377 ERRIEDALNVVRAAVEEGKIVPGGGAAEIEAALRLREYAMTVEGGDEQLGIEAFARALEAPPRQLAENAGLDPIEVLSKL 456 (524)
T ss_pred HHHHHHHHHHHHHHHhcCCeEeCCCHHHHHHHHHHHhhhccCCchHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 999999999999999999 9999999999999999998433444356799999999999999999999999999999999
Q ss_pred hcCCC--cceeecCCCcc-cccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCC
Q 007981 512 RTSDW--RFGYNAMTGRY-EDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPK 571 (582)
Q Consensus 512 ~~~~~--~~Gid~~~g~i-~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~ 571 (582)
++.+. ++|||+.+|++ .||++.|||||+.||+++|++|+++|.+||++|++|..+ |+++
T Consensus 457 ~~~~~~~~~G~d~~~~~~~~dm~~~GI~dP~~v~~~al~~A~e~a~llL~~d~iI~~~-~~~~ 518 (524)
T COG0459 457 RSAHATTNYGIDAFTGEYEDDMIEAGIIDPLKVKRSALKNAAEAAGLLLTIDDIIAAK-PEEK 518 (524)
T ss_pred HhcccCCccceeccCCccccchHhccCcChHHHHHHHHHHHHHHHHHHHHHHHhhccC-Cccc
Confidence 99753 69999999999 789999999999999999999999999999999999998 8754
No 22
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=4.8e-91 Score=774.51 Aligned_cols=458 Identities=24% Similarity=0.343 Sum_probs=415.0
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007981 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (582)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e 130 (582)
+...|.+++..|++||..|+++++|||||+||+|||++ .|+++|||||+||+++|+++||+ |+|++++|++||++
T Consensus 6 ~~~~~~~~~~~ni~~~~~l~~~vkttlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~hP~----akll~~~a~~qd~~ 81 (536)
T TIGR02340 6 ERTSGQDVRTQNVTAAMAIANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKILVELAQLQDRE 81 (536)
T ss_pred ceecHHHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeccHHHHHHHhcccChH----HHHHHHHHHHHHHH
Confidence 46778999999999999999999999999999999999 99999999999999999999997 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHcc-CcccC--CHHHHHHHHHHhcC------Cc
Q 007981 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQK-SFPVT--GRDDIKAVASISAG------ND 201 (582)
Q Consensus 131 ~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~-s~~v~--~~~~L~~va~ts~~------~~ 201 (582)
+||||||+|||+++||+++.+++++|+||..|++||+.|++.+++.|+++ ++|++ +.+.|.++|+|+++ ++
T Consensus 82 ~GDGTTt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~ 161 (536)
T TIGR02340 82 VGDGTTSVVIIAAELLKRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSVSVDELGREALINVAKTSMSSKIIGLDS 161 (536)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHHHHHHhccccchhhH
Confidence 99999999999999999999999999999999999999999999999975 88987 78889999999987 46
Q ss_pred hhHHHHHHHHHHHhc---cCCc-------EEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEe
Q 007981 202 EFIGNLIADAIIKIG---ADGV-------ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLIT 269 (582)
Q Consensus 202 ~~l~~li~~Av~~v~---~~g~-------I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~ 269 (582)
+.|++++++|+..++ .+|. |++ +.|++++|+ ++++|++|+++|.||. |+++++||+|+++
T Consensus 162 ~~ls~l~~~A~~~v~~~~~~g~~~~~~~~I~i~k~~G~s~~~s-~~i~Gi~i~~~~~~~~-------m~~~~~n~kIli~ 233 (536)
T TIGR02340 162 DFFSNIVVDAVLAVKMTNENGETKYPIKAVNILKAHGGSARES-YLVKGYALNCTRASQQ-------MPKRIKKAKIACL 233 (536)
T ss_pred HHHHHHHHHHHHHHhcccccCccccchHHeEEEEecCCCcccc-EEEEEEEEecccCCCC-------CcceecCCcEEEE
Confidence 899999999999996 2342 333 689999887 9999999999999974 8899999999999
Q ss_pred cccCCCHH-------------h-----------HHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCC
Q 007981 270 DQKISTVK-------------E-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (582)
Q Consensus 270 ~~~i~~~~-------------e-----------l~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~ 325 (582)
++++++.+ + +.+.++.+++.|++||+++++|++.++++|.++. +++++
T Consensus 234 ~~~L~~~~~~~~~~~~~~~~~~le~~~~~E~~~i~~~i~~I~~~g~~lvi~~k~I~~~a~~~L~k~~------I~~i~-- 305 (536)
T TIGR02340 234 DFNLQKQKMALGVQIVVDDPAKLEGIRQREADITKERIKKILKAGANVVLTTGGIDDMCLKYFVEAG------AMGVR-- 305 (536)
T ss_pred ecCCCCCcccCceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHCC------cEEEe--
Confidence 99975443 1 2356778889999999999999999999999875 46765
Q ss_pred CcCCCcHHHHHHHHHHhC-CccccccC------CCccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHHHhh
Q 007981 326 GFGDGKKALLQDIALMTG-ELGLTLAG------ATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAA 395 (582)
Q Consensus 326 ~~~~~~~~~Le~ia~~tG-~i~~~l~~------l~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~ 395 (582)
++++.+|+|||++|| ++++++.+ +++++||+|+.|+ +++++|++|++++++
T Consensus 306 ---rv~~~~LerIa~~tGa~ii~~~~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~---------------- 366 (536)
T TIGR02340 306 ---RCKKEDLKRIAKATGGTLVSTLADLEGEETFDASYLGFADEVVEERIADDECILIKGTKGR---------------- 366 (536)
T ss_pred ---cCCHHHHHHHHHHhCCEEecchhhcCccccccccccccCceEEEEEECCeEEEEEEcCCCC----------------
Confidence 456899999999999 77776644 4556699999999 688999999988654
Q ss_pred hchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCC
Q 007981 396 TDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSME 474 (582)
Q Consensus 396 ~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~ 474 (582)
.+|||+|||+|+.+++|++|+++||++++|+++++| +|||||++|++|+.+|++++.+..
T Consensus 367 -------------------~~~TIlirG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vVpGGGa~e~~ls~~l~~~~~~~~ 427 (536)
T TIGR02340 367 -------------------KSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLG 427 (536)
T ss_pred -------------------CEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhcCCCEEECCCHHHHHHHHHHHHHhhhCC
Confidence 489999999999999999999999999999999999 999999999999999998876666
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC------------CCcceeecCCCcccccccCcccccHHHH
Q 007981 475 DPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS------------DWRFGYNAMTGRYEDLLSAGVADPCRVA 542 (582)
Q Consensus 475 ~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~------------~~~~Gid~~~g~i~d~~~~gI~Dp~~vk 542 (582)
+.+ ++++++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.+|
T Consensus 428 ~~~-~~~~~~fa~AL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~Dp~~~k 506 (536)
T TIGR02340 428 SRE-QLAIAEFAEALLIIPKVLAVNAALDSTELVAKLRAYHAAAQLKPEKKHLKWYGLDLSNGKIRDNKEAGVLEPAVSK 506 (536)
T ss_pred Chh-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCcccccccCceEeEEccCCccccchhccceecHHHH
Confidence 654 689999999999999999999999999999999762 3469999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHChhHHhcCCCCC
Q 007981 543 RCALQNAVSIAAVVLTTEAVLADKIKQ 569 (582)
Q Consensus 543 ~~~l~~A~e~a~~iL~iD~iI~~~~p~ 569 (582)
+++|+.|+|+|++|||||++|+.+ |+
T Consensus 507 ~~~l~~A~e~a~~iL~ID~ii~~~-~~ 532 (536)
T TIGR02340 507 VKSLKFATEAAITILRIDDLIKLN-PE 532 (536)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhcC-CC
Confidence 999999999999999999999987 74
No 23
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=7.5e-91 Score=772.01 Aligned_cols=459 Identities=21% Similarity=0.293 Sum_probs=419.6
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.+...|.+++..|+.||..++++++|||||+||+|||++ .|+++|||||+|||++|+++||+ |+|++++|++||+
T Consensus 9 ~~~~~~~~~~~~ni~a~~~l~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~hP~----akll~~~a~~q~~ 84 (525)
T TIGR02344 9 TKRESGRKAQLSNIQAAKAVADIIRTTLGPRAMLKMLLDPMGGIVMTNDGNAILREIDVAHPA----AKSMIELSRTQDE 84 (525)
T ss_pred CccccHHHHHHHHHHHHHHHHHHHhcccCCCCCCceEEcCCCCEEEEccHHHHHHhccCCCHH----HHHHHHHHHhhhh
Confidence 457788999999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCC------c
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------D 201 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~------~ 201 (582)
++||||||+|+|+++||+++.+++++|+||..|++||++|.+.+++.|+++++|++ +.+.|.++|+|++++ +
T Consensus 85 ~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~ 164 (525)
T TIGR02344 85 EVGDGTTSVIILAGEMLSVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIPVDVNDDAAMLKLIQSCIGTKFVSRWS 164 (525)
T ss_pred hccCCcchhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHhhccccchhHH
Confidence 99999999999999999999999999999999999999999999999999999987 677899999988765 5
Q ss_pred hhHHHHHHHHHHHhccCC-----------cEEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEE
Q 007981 202 EFIGNLIADAIIKIGADG-----------VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (582)
Q Consensus 202 ~~l~~li~~Av~~v~~~g-----------~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll 268 (582)
+.|++++++|+..+++++ .|++ .+|++++|| ++++|++|++++.|+ +|+++++||+|++
T Consensus 165 ~~ls~l~~~Ai~~v~~~~~~~~~~~d~~~~I~i~ki~Gg~~~dS-~lv~Gvvi~k~~~~~-------~m~~~~~n~kIll 236 (525)
T TIGR02344 165 DLMCDLALDAVRTVKRDLGNGRKEIDIKRYAKVEKIPGGDIEDS-CVLKGVMINKDVTHP-------KMRRYIENPRIVL 236 (525)
T ss_pred HHHHHHHHHHHHHhhccccCCCCccChhhceEEEEecCCChHhc-CcccceEEecccCCC-------CCccccCCCCEEE
Confidence 899999999999998653 1344 479999998 999999999998886 3888999999999
Q ss_pred ecccCCC-------------HHhHHHH-----------HHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeC
Q 007981 269 TDQKIST-------------VKEIVPL-----------LEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKC 324 (582)
Q Consensus 269 ~~~~i~~-------------~~el~~~-----------le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~ 324 (582)
++++++. ++++.++ ++++.+.|++|||++++|++.++++|..++ |+|++
T Consensus 237 l~~~Le~~~~~~~~~i~i~~~~~~~~~l~~E~~~l~~~v~~i~~~~~~vIi~~k~I~dla~~~l~~~~------I~av~- 309 (525)
T TIGR02344 237 LDCPLEYKKGESQTNVEIMKEEDWNRILQMEEEYVQLMCEDIIAVKPDLVITEKGVSDLAQHYLLKAN------ISAIR- 309 (525)
T ss_pred EecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHCC------ceEEe-
Confidence 9999765 3555444 447888999999999999999999988754 46764
Q ss_pred CCcCCCcHHHHHHHHHHhC-CccccccCCCccccce-eeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchH
Q 007981 325 PGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGI-ARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNA 399 (582)
Q Consensus 325 ~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~-~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~ 399 (582)
++++.+|+|||++|| +++++++++++++||+ |+.|++ +++++++|++|+++
T Consensus 310 ----~v~~~~LerIa~~tGa~ii~~l~~l~~~~lG~~~~~v~~~~ig~~~~~~~~g~~~~-------------------- 365 (525)
T TIGR02344 310 ----RVRKTDNNRIARACGATIVNRPEELRESDVGTGCGLFEVKKIGDEYFTFFTECKDP-------------------- 365 (525)
T ss_pred ----cCCHHHHHHHHHHhCCeEecchhhCCHhhcCCcCCEEEEEEECCeEEEEEEcCCCC--------------------
Confidence 677999999999999 9999999999999999 998886 66889999988654
Q ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhh
Q 007981 400 YLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDE 478 (582)
Q Consensus 400 ~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq 478 (582)
..|||+|||+|+.+++|.||+++||+++++++++++ +||||||+|++||.+|++++.+..+.+
T Consensus 366 ---------------~~~TIlLrG~t~~~l~E~er~l~DAl~~vk~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~- 429 (525)
T TIGR02344 366 ---------------KACTILLRGASKDVLNEIERNLQDAMAVARNVLLEPKLLPGGGATEMAVSVYLAKKASKLEGVQ- 429 (525)
T ss_pred ---------------CEEEEEEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHHhcCCCHH-
Confidence 479999999999999999999999999999999996 999999999999999999887777765
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC-----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHH
Q 007981 479 QIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS-----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIA 553 (582)
Q Consensus 479 ~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~-----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a 553 (582)
++++++|++||+.||++||+|||+|+.+++++|++. +.++|+|+.+|++.||++.|||||+.+|+++|+.|+++|
T Consensus 430 ~~~~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~~~d~~~~gV~dp~~vk~~~l~~A~e~a 509 (525)
T TIGR02344 430 QWPYRAVADALEIIPRTLAQNCGVNVIRTLTELRAKHAQEGNCTWGIDGETGKIVDMKEKGIWEPLAVKLQTYKTAIESA 509 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCCeEeEECCCCccccchhccceecHHHHHHHHHHHHHHH
Confidence 589999999999999999999999999999999872 457999999999999999999999999999999999999
Q ss_pred HHHHChhHHhcCCCCC
Q 007981 554 AVVLTTEAVLADKIKQ 569 (582)
Q Consensus 554 ~~iL~iD~iI~~~~p~ 569 (582)
++|||||++|... |+
T Consensus 510 ~~iL~id~ii~~~-~~ 524 (525)
T TIGR02344 510 CMLLRIDDIVSGV-KK 524 (525)
T ss_pred HHHHhhhHHhhcC-CC
Confidence 9999999999887 74
No 24
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=7.1e-91 Score=770.91 Aligned_cols=459 Identities=21% Similarity=0.295 Sum_probs=417.2
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.....|.+++..|+.+|..++++++|||||+||+|||++ .| ++|||||+|||++|+++||+ |+|++++|++||+
T Consensus 11 ~~~~~~~~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g-~~iTnDG~TIlk~i~~~hP~----a~ll~~~a~~q~~ 85 (522)
T TIGR02345 11 TDTSQGKGQLISNINACVAIAEILKTTLGPRGMDKLIVGKNG-ATVSNDGATILKLLDIVHPA----AKTLVDIAKSQDS 85 (522)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCceEEECCCC-cEEeCcHHHHHHHhcccChH----HHHHHHHHHHHHH
Confidence 347888999999999999999999999999999999999 88 99999999999999999997 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC-----CHHHHHHHHHHhcC-----
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-----GRDDIKAVASISAG----- 199 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~~~L~~va~ts~~----- 199 (582)
++||||||+|||+++||+++.+++++|+||..|++||++|++.++++|+++++|++ +.+.|.++|+|+++
T Consensus 86 ~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~tsl~sK~~~ 165 (522)
T TIGR02345 86 EVGDGTTSVVILAGELLKEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVTIDEVKGEQREVLEKCAATALNSKLIA 165 (522)
T ss_pred HhCCCchhHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCcccccHHHHHHHHHHHhcccccc
Confidence 99999999999999999999999999999999999999999999999999999997 55789999999987
Q ss_pred -CchhHHHHHHHHHHHhccCC----c--EEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc
Q 007981 200 -NDEFIGNLIADAIIKIGADG----V--ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (582)
Q Consensus 200 -~~~~l~~li~~Av~~v~~~g----~--I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~ 272 (582)
++++|++++++|+.++++++ . |....|++++|+ ++++|++|+++|.||+|.+ |+++++||+|++++++
T Consensus 166 ~~~~~l~~l~~~A~~~v~~~~~~~~~I~i~ki~Ggs~~ds-~~v~Giv~~~~~~~~~~~~----~~~~~~n~kIll~~~~ 240 (522)
T TIGR02345 166 HEKEFFSKMIVDAVLQLDIDDLDLKLIGVKKVQGGSLQDS-VLVNGVAFKKTFSYAGFEQ----QPKKFANPKILLLNVE 240 (522)
T ss_pred chHHHHHHHHHHHHHHHhhccCChhHheEEeecCCCHHhc-ceecceEEecccCcccccc----CCceeccceEEEEecC
Confidence 46899999999999998652 2 233489999999 7999999999999998754 6788999999999998
Q ss_pred CCC-------------HHhH-----------HHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcC
Q 007981 273 IST-------------VKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFG 328 (582)
Q Consensus 273 i~~-------------~~el-----------~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~ 328 (582)
++. ++++ .++++.+.+.|+++|+|+++|++.++++|..+. |.+++
T Consensus 241 Le~~~~~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~i~d~~~~~L~~~~------I~~~~----- 309 (522)
T TIGR02345 241 LELKAEKDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLPIGDLATQYFADHN------IFCAG----- 309 (522)
T ss_pred cccCccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCCccHHHHHHHHHCC------cEEEe-----
Confidence 642 2232 345667888899999999999999999998865 36654
Q ss_pred CCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHH
Q 007981 329 DGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRK 404 (582)
Q Consensus 329 ~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~ 404 (582)
++.+.+|++++++|| .++++++++++++||+|+.++. +++++++|++|+++
T Consensus 310 ~v~~~dl~ria~~tga~ii~~~~~l~~~~LG~~~~ie~~~~~~~r~~~~~g~~~~------------------------- 364 (522)
T TIGR02345 310 RVSDEDLKRVVKACGGSIQSTTSDLEADVLGTCALFEERQIGSERYNYFTGCPHA------------------------- 364 (522)
T ss_pred cCCHHHHHHHHHHhCCeEEcchhhCChhhccCCceEEEEEECCeEEEEEEcCCCC-------------------------
Confidence 555789999999999 9999999999999999999985 56789999988543
Q ss_pred HHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHH
Q 007981 405 LSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGAD 483 (582)
Q Consensus 405 l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~ 483 (582)
.+|||+|||+|+.+++|++|+++||++++|++++++ +|||||++|++|+.+|++++++..+.+ +++++
T Consensus 365 ----------~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~-~~~i~ 433 (522)
T TIGR02345 365 ----------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRALKARKIVAGGGAIEMELSKILREHSKKIDGKQ-QLIIE 433 (522)
T ss_pred ----------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHHhhCCCHH-HHHHH
Confidence 489999999999999999999999999999999985 999999999999999999877666665 58999
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHhhc----CCCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHCh
Q 007981 484 IVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTT 559 (582)
Q Consensus 484 ~~a~AL~~ip~~La~NaG~d~~~vl~kl~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~i 559 (582)
+|++||+.||++||+|||+|+.+++.+|++ .+.++|||+.+|++.||++.|||||+.||+++|++|+++|++||+|
T Consensus 434 ~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~i 513 (522)
T TIGR02345 434 AFAKALEIIPRSLCENAGFDSIEILNKLRSRHAKGGKWYGVDINTEDIGDNFENFVWEPLLVKKNALKAAFEAACTILSI 513 (522)
T ss_pred HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceeCCCCcccchhhcCceEcHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999987 3557999999999999999999999999999999999999999999
Q ss_pred hHHhcCC
Q 007981 560 EAVLADK 566 (582)
Q Consensus 560 D~iI~~~ 566 (582)
|++|+.+
T Consensus 514 d~ii~~~ 520 (522)
T TIGR02345 514 DETIMNP 520 (522)
T ss_pred HHHHhCC
Confidence 9999764
No 25
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=6.2e-91 Score=770.57 Aligned_cols=463 Identities=21% Similarity=0.323 Sum_probs=412.7
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
|+...+.+++..|+.||..++++++|||||+||+|||++ .|+++|||||+|||++|+++||+ |+|++++|++||+
T Consensus 2 ~~~~~~~~~~~~ni~a~~~ia~~~kttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~~~a~~qd~ 77 (517)
T TIGR02342 2 QDKDKPTDVRTSNIVAAKAVADAIRTSLGPRGMDKMIQSGNGEVIITNDGATILKQMGVIHPA----AKMLVELSKAQDI 77 (517)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEEcCCCCEEEeCCHHHHHHhccccChH----HHHHHHHHHHHHH
Confidence 345667788999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCC------c
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------D 201 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~------~ 201 (582)
++||||||+|+|+++||+++.+++++|+||..|++||++|++.++++|+++++|++ +.+.|.++|+||+++ .
T Consensus 78 ~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~ 157 (517)
T TIGR02342 78 EAGDGTTSVVILAGALLGACETLLERGIHPTTISESFQIAADEAIKILDEMSIPVDLSDREILIKSATTSLSSKVVSQYS 157 (517)
T ss_pred HhCCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCccCHHHHHHHHHHHhccccchhHH
Confidence 99999999999999999999999999999999999999999999999999999987 788999999999875 3
Q ss_pred hhHHHHHHHHHHHhccC---Cc-----EEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecc
Q 007981 202 EFIGNLIADAIIKIGAD---GV-----ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (582)
Q Consensus 202 ~~l~~li~~Av~~v~~~---g~-----I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~ 271 (582)
+.|++++++|+..++++ +. |++ ..|+++.|+ ++++|++|+++|.|+. +||+.++||+|+++++
T Consensus 158 ~~ls~l~~~a~~~v~~~~~~~~~~~~~i~i~k~~Ggs~~ds-~li~Givl~k~~~~~~------~mpk~i~n~kI~ll~~ 230 (517)
T TIGR02342 158 SLLAPLAVDAVLKVIDPENDKNVDLNDIKVVKKLGGTIDDT-ELIEGLVFTQKASRSA------GGPTRIEKAKIGLIQF 230 (517)
T ss_pred HHHHHHHHHHHHHHhccccCCccCHHHeeEEeccCCChhhc-EEEeeEEEeccccccC------CCCccccCCcEEEEec
Confidence 67899999999999752 32 333 478999998 9999999999999842 4788899999999998
Q ss_pred cCC-------------CH-----------HhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCc
Q 007981 272 KIS-------------TV-----------KEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (582)
Q Consensus 272 ~i~-------------~~-----------~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~ 327 (582)
+++ +. +++.++++++++.|+|||||+|+|++++++.+..|.+.+ .+|+||+
T Consensus 231 ~Le~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~lvi~~~~I~~~~l~~l~~~~l~~-~~I~av~---- 305 (517)
T TIGR02342 231 QISPPKTDMENQVIVNDYAQMDRVLKEERKYILNIVKKIKKTGCNVLLIQKSILRDAVNDLALHFLAK-MKIMVVK---- 305 (517)
T ss_pred CCCCCcccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHhh-CCceEEe----
Confidence 753 22 124567889999999999999999544444444444433 4578887
Q ss_pred CCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEE-E--ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHH
Q 007981 328 GDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVT-V--KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSR 403 (582)
Q Consensus 328 ~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~-~--~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~ 403 (582)
++++.+|+|||++|| +++++++++++++||+|+.|+ + ++..++++.+++++
T Consensus 306 -~v~~~~LerIa~~tGa~ii~~~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~~------------------------ 360 (517)
T TIGR02342 306 -DIEREEVEFICKTIGCKPIASIDHFTADKLGSAELVEEVTTDGGKIIKITGIQNA------------------------ 360 (517)
T ss_pred -cCCHHHHHHHHHHHCCEEEcchhhcCcccCcCCceEEEEEECCeEEEEEEccCCC------------------------
Confidence 556899999999999 889999999999999999998 3 45577788877542
Q ss_pred HHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHH
Q 007981 404 KLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGA 482 (582)
Q Consensus 404 ~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i 482 (582)
++++||+|||+|+.+++|.+|+++||+++++++++++ +||||||+|++||++|++++++.++.+ ++++
T Consensus 361 ----------~~~~tIllrG~t~~~l~E~er~i~DAl~~v~~~~~~~~~VpGGGa~e~~ls~~l~~~~~~~~~~~-~~~i 429 (517)
T TIGR02342 361 ----------GKTVTVLLRGSNKLVIDEAERSLHDALCVIRSLVKKRGLIPGGGAPEIEIAIKLSKLARTMKGVE-SYCV 429 (517)
T ss_pred ----------CceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECcCHHHHHHHHHHHHHHhcCCcHH-HHHH
Confidence 4689999999999999999999999999999999986 999999999999999999987777765 6899
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHhhc----CCCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHC
Q 007981 483 DIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLT 558 (582)
Q Consensus 483 ~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~ 558 (582)
++|++||+.||++||+|||+|+.+++++|++ ++.++|||+.+|+++||++.|||||+.+|+++|++|+++|++|||
T Consensus 430 ~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~ai~~A~e~a~~iL~ 509 (517)
T TIGR02342 430 RAFADALEVIPYTLAENAGLNPIDVVTELRNRHANGEKYAGISVRKGGITDMLEEEVLQPLLVTTSAVTLASETVRMILK 509 (517)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCccceecCCCCccchhhccceEcHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999987 356899999999999999999999999999999999999999999
Q ss_pred hhHHhcC
Q 007981 559 TEAVLAD 565 (582)
Q Consensus 559 iD~iI~~ 565 (582)
||++|+.
T Consensus 510 iD~ii~~ 516 (517)
T TIGR02342 510 IDDIVFT 516 (517)
T ss_pred ccceeec
Confidence 9999875
No 26
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.6e-90 Score=765.61 Aligned_cols=457 Identities=21% Similarity=0.312 Sum_probs=416.3
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-C--CCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-S--DKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~--g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
+...|.+++..|+.||..++++++|||||+||+|||++ . |+++|||||+||+++|+++||. |+|++++|++||
T Consensus 7 ~~~~~~~a~~~n~~~~~~i~~~v~tslGP~G~~Kmi~~~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~qd 82 (517)
T cd03336 7 QEEKGETARLSSFVGAIAIGDLVKTTLGPKGMDKILQSVGRSGGVTVTNDGATILKSIGVDNPA----AKVLVDISKVQD 82 (517)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEeecCCCCCCeEEeccHHHHHHHccCcChH----HHHHHHHHHHHH
Confidence 46678899999999999999999999999999999999 5 9999999999999999999994 999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC-----CHHHHHHHHHHhcCC---
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-----GRDDIKAVASISAGN--- 200 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~~~L~~va~ts~~~--- 200 (582)
+++||||||+||||++||+++.+++++|+||..|++||++|.+.+++.|+++++|++ +.+.|.++|+|++++
T Consensus 83 ~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~t~lssk~~ 162 (517)
T cd03336 83 DEVGDGTTSVTVLAAELLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVDHSSDEEAFREDLLNIARTTLSSKIL 162 (517)
T ss_pred hHhCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcccccchhHHHHHHHHHhhcccccc
Confidence 999999999999999999999999999999999999999999999999999999984 357899999988764
Q ss_pred ---chhHHHHHHHHHHHhccC---CcEE--EeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc
Q 007981 201 ---DEFIGNLIADAIIKIGAD---GVIL--IESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (582)
Q Consensus 201 ---~~~l~~li~~Av~~v~~~---g~I~--i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~ 272 (582)
+++|++++++|+..++.. ..|. ..+|++++|+ ++++|+++++++.++ |+++++||+|++++++
T Consensus 163 ~~~~~~l~~l~~~A~~~v~~~~~~~~i~i~ki~G~s~~ds-~l~~G~v~~~~~~~~--------~~~~~~n~kIli~~~~ 233 (517)
T cd03336 163 TQDKEHFAELAVDAVLRLKGSGNLDAIQIIKKLGGSLKDS-YLDEGFLLDKKIGVN--------QPKRIENAKILIANTP 233 (517)
T ss_pred chhHHHHHHHHHHHHHHhhccCCccceeEEEccCCCccce-EEEeeEEEecccCCC--------CCCeeccccEEEEecC
Confidence 589999999999998632 2334 3589999999 899999999987553 6788999999999998
Q ss_pred CC--------------CHHhHH-----------HHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCc
Q 007981 273 IS--------------TVKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (582)
Q Consensus 273 i~--------------~~~el~-----------~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~ 327 (582)
++ +++++. ++++.+.+.|++++++++.|++.++++|..++ |+|||+++
T Consensus 234 le~~~~~~~~~~~~~~~~~~~~~l~~~E~~~~~~~v~~I~~~gv~~v~~~~~I~~~~~~~l~~~~------I~av~~v~- 306 (517)
T cd03336 234 MDTDKIKIFGAKVRVDSTAKVAEIEEAEKEKMKNKVEKILKHGINCFINRQLIYNYPEQLFADAG------IMAIEHAD- 306 (517)
T ss_pred CCcccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHCC------cEEEecCC-
Confidence 65 444442 34678899999999999999999999998865 58998876
Q ss_pred CCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHH
Q 007981 328 GDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSR 403 (582)
Q Consensus 328 ~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~ 403 (582)
+.+|+|||++|| +++++++++++++||+|+.|+. +++++++|++|++
T Consensus 307 ----~~~L~rIa~~tGa~ii~~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~------------------------- 357 (517)
T cd03336 307 ----FDGVERLALVTGGEIASTFDHPELVKLGTCKLIEEIMIGEDKLIRFSGVAA------------------------- 357 (517)
T ss_pred ----HHHHHHHHHHhCCEEecccCCCCcccccccceEEEEEECCeEEEEEEccCC-------------------------
Confidence 567999999999 8899999999999999999974 6789999998864
Q ss_pred HHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHH
Q 007981 404 KLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGA 482 (582)
Q Consensus 404 ~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i 482 (582)
++.|||+|||+|+.+++|.+|+++||++++++++++| +||||||+|++|+++|++++++..+.+ ++++
T Consensus 358 ----------~~~~TI~lrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~-~~~i 426 (517)
T cd03336 358 ----------GEACTIVLRGASQQILDEAERSLHDALCVLAQTVKDTRVVLGGGCSEMLMAKAVEELAKKTPGKK-SLAI 426 (517)
T ss_pred ----------CceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhhCCCHH-HHHH
Confidence 3589999999999999999999999999999999998 999999999999999999987777765 5899
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHhhc----CCCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHC
Q 007981 483 DIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLT 558 (582)
Q Consensus 483 ~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~ 558 (582)
++|++||+.||++||+|||+|+.+++++|++ ++.++|||+.+|++.||++.|||||+.||+++|+.|+++|++||+
T Consensus 427 ~~~a~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~ 506 (517)
T cd03336 427 EAFAKALRQLPTIIADNAGYDSAELVAQLRAAHYNGNTTAGLDMRKGTVGDMKELGITESFKVKRQVLLSASEAAEMILR 506 (517)
T ss_pred HHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCceeeecCCCCccchhhcCceecHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999987 366799999999999999999999999999999999999999999
Q ss_pred hhHHhcCCCCC
Q 007981 559 TEAVLADKIKQ 569 (582)
Q Consensus 559 iD~iI~~~~p~ 569 (582)
||++|+.+ |+
T Consensus 507 id~ii~~~-~~ 516 (517)
T cd03336 507 VDDIIKCA-PR 516 (517)
T ss_pred HhHHhhcC-CC
Confidence 99999997 74
No 27
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.9e-90 Score=768.34 Aligned_cols=459 Identities=23% Similarity=0.323 Sum_probs=419.7
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007981 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (582)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e 130 (582)
+...|.+++..|+.+|..++++++|||||+||+|||++ .|+++|||||+||+++|+++||+ |+|++++|++||++
T Consensus 10 ~~~~~~~~~~~ni~a~~~i~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----akll~~~a~~q~~~ 85 (522)
T cd03340 10 DTSQGKGQLISNINACQAIADAVRTTLGPRGMDKLIVDGRGKVTISNDGATILKLLDIVHPA----AKTLVDIAKSQDAE 85 (522)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEEEcCCCCEEEeccHHHHHHHccccCHH----HHHHHHHHHHhHhH
Confidence 46678899999999999999999999999999999999 99999999999999999999997 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCC------HHHHHHHHHHhcC-----
Q 007981 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG------RDDIKAVASISAG----- 199 (582)
Q Consensus 131 ~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~------~~~L~~va~ts~~----- 199 (582)
+||||||+|+|+++||+++.+++++|+||..|++||++|++.+++.|+++++|+++ .+.|.++|+|+++
T Consensus 86 ~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~~l~~ia~t~l~sK~~~ 165 (522)
T cd03340 86 VGDGTTSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEEQRELLEKCAATALNSKLIA 165 (522)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCcccccccHHHHHHHHHHHhccCcch
Confidence 99999999999999999999999999999999999999999999999999999864 5679999999987
Q ss_pred -CchhHHHHHHHHHHHhccCC---cEEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccC
Q 007981 200 -NDEFIGNLIADAIIKIGADG---VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKI 273 (582)
Q Consensus 200 -~~~~l~~li~~Av~~v~~~g---~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i 273 (582)
++++|++++++|+..+++++ .|++ ..|++++|+ ++++|++|+++|.+|+|.+ |+++++||+|+++++++
T Consensus 166 ~~~~~l~~l~~~A~~~v~~~~~~~~I~i~~i~Ggs~~ds-~lv~Giv~~k~~~~~~~~~----~~~~~~n~kIll~~~~L 240 (522)
T cd03340 166 SEKEFFAKMVVDAVLSLDDDLDLDMIGIKKVPGGSLEDS-QLVNGVAFKKTFSYAGFEQ----QPKKFKNPKILLLNVEL 240 (522)
T ss_pred hHHHHHHHHHHHHHHHhcccCChhHheEeeecCCChhhc-eeeeeEEEecccCcccccc----CCccccCCeEEEEeCCC
Confidence 46899999999999998765 3333 589999999 8999999999999998743 67789999999999985
Q ss_pred C-------------CHHh-----------HHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCC
Q 007981 274 S-------------TVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGD 329 (582)
Q Consensus 274 ~-------------~~~e-----------l~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~ 329 (582)
+ ++++ +.++++.+.+.|+++|+++++|+|.++++|.++.+ ++++ +
T Consensus 241 e~~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~vvl~~~~i~d~a~~~l~~~~I------~~~~-----~ 309 (522)
T cd03340 241 ELKAEKDNAEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSGANVVLSKLPIGDLATQYFADRDI------FCAG-----R 309 (522)
T ss_pred CCCccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcHHHHHHHHHCCc------EEEE-----e
Confidence 3 4333 34567788999999999999999999999998753 5654 4
Q ss_pred CcHHHHHHHHHHhC-CccccccCCCccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHH
Q 007981 330 GKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKL 405 (582)
Q Consensus 330 ~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l 405 (582)
+++.+|+|||++|| +++++++++++++||+|+.|+ ++++++++|++|.++
T Consensus 310 v~~~~l~rIa~~tGa~ii~~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~-------------------------- 363 (522)
T cd03340 310 VPEEDLKRVAQATGGSIQTTVSNITDDVLGTCGLFEERQVGGERYNIFTGCPKA-------------------------- 363 (522)
T ss_pred CCHHHHHHHHHHHCCEEeeccccCCccccccceEEEEEEECCEEEEEEECCCCC--------------------------
Confidence 56899999999999 899999999999999999998 578899999998643
Q ss_pred HHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHH
Q 007981 406 SERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADI 484 (582)
Q Consensus 406 ~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~ 484 (582)
..+||++||+|+.+++|.+|+++||++++++++++| +|||||++|++++.+|++++.+..+.+ ++++++
T Consensus 364 ---------~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGG~~E~~ls~~l~~~~~~~~~~~-~~~~~~ 433 (522)
T cd03340 364 ---------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQ-QLVINA 433 (522)
T ss_pred ---------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHH-HHHHHH
Confidence 479999999999999999999999999999999998 999999999999999999877666654 689999
Q ss_pred HHHHHHHHHHHHHHhcCCChHHHHHHhhcC----C-CcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHCh
Q 007981 485 VAKALIVPAISIATNAGVDGTIVVEKTRTS----D-WRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTT 559 (582)
Q Consensus 485 ~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~-~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~i 559 (582)
|++||+.||++||+|||+|+.+++.+|++. + .++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||+|
T Consensus 434 fa~aL~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~i~~A~e~a~~iL~i 513 (522)
T cd03340 434 FAKALEIIPRQLCDNAGFDATDILNKLRQKHAQGGGKWYGVDINNEGIADNFEAFVWEPSLVKINALTAATEAACLILSV 513 (522)
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCCeeeeeCCCCcccchhhcCceEcHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999873 3 57999999999999999999999999999999999999999999
Q ss_pred hHHhcCC
Q 007981 560 EAVLADK 566 (582)
Q Consensus 560 D~iI~~~ 566 (582)
|++|+.+
T Consensus 514 d~ii~~~ 520 (522)
T cd03340 514 DETIKNP 520 (522)
T ss_pred hhheeCC
Confidence 9999775
No 28
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=6.1e-90 Score=764.74 Aligned_cols=459 Identities=20% Similarity=0.311 Sum_probs=417.5
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-C-----CCeEEecCHHHHHhhcccccchhhHHhHHHHHHH
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-S-----DKLKVINDGVTIARAIELSDTIENAGAMLMQEVA 124 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~-----g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a 124 (582)
.+...|.+++..|+.||..++++++|||||+||+|||++ . |+++|||||+|||++|+++|| +|+|++++|
T Consensus 15 ~~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~Kmi~~~~~~~~~G~~~iTnDG~TIlk~i~~~hP----~akll~~~a 90 (533)
T PTZ00212 15 AQEEKGETARLQSFVGAIAVADLVKTTLGPKGMDKILQPMSEGPRSGNVTVTNDGATILKSVWLDNP----AAKILVDIS 90 (533)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhCCCCCCccceEeecCCCcccCCCEEEeccHHHHHHhccCcCH----HHHHHHHHH
Confidence 457788999999999999999999999999999999999 5 999999999999999999999 599999999
Q ss_pred HhhhhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCC-----HHHHHHHHHHhcC
Q 007981 125 SKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAG 199 (582)
Q Consensus 125 ~~qd~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~L~~va~ts~~ 199 (582)
++||+++||||||+|+||++||+++.+++++|+||..|++||++|++.+++.|+++++|+++ .+.|.++|+|+++
T Consensus 91 ~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~t~l~ 170 (533)
T PTZ00212 91 KTQDEEVGDGTTSVVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFDHGSDEEKFKEDLLNIARTTLS 170 (533)
T ss_pred HhhhhhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCccchhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999864 5789999998876
Q ss_pred C------chhHHHHHHHHHHHhccC---Cc--EEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEE
Q 007981 200 N------DEFIGNLIADAIIKIGAD---GV--ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (582)
Q Consensus 200 ~------~~~l~~li~~Av~~v~~~---g~--I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll 268 (582)
+ .+.|++++++|+..+.+. .. |...+|++++|+ ++++|+++++++.|+ |+++++||||++
T Consensus 171 sk~~~~~~~~l~~i~~~av~~i~~~~~~~~I~i~ki~Ggsi~ds-~lv~G~v~~~~~~~~--------~~~~i~n~kIll 241 (533)
T PTZ00212 171 SKLLTVEKDHFAKLAVDAVLRLKGSGNLDYIQIIKKPGGTLRDS-YLEDGFILEKKIGVG--------QPKRLENCKILV 241 (533)
T ss_pred ccccchhHHHHHHHHHHHHHHHhccCCccceEEEEecCcCcccc-EEEEeEEEecccCCC--------CCccccCCcEEE
Confidence 5 378999999999988542 22 344689999999 899999999987653 678999999999
Q ss_pred ecccC--------------CCHHhHH-----------HHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEe
Q 007981 269 TDQKI--------------STVKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVK 323 (582)
Q Consensus 269 ~~~~i--------------~~~~el~-----------~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk 323 (582)
+++++ ++++++. ++++.+.+.|+++|+++++|++.++++|.+++ |+|||
T Consensus 242 ~~~~Le~~k~~~~~~~~~i~~~~~~~~l~~~E~~~i~~~v~~Ii~~gv~vvv~~~~I~d~a~~~L~~~~------I~avr 315 (533)
T PTZ00212 242 ANTPMDTDKIKIYGAKVKVDSMEKVAEIEAAEKEKMKNKVDKILAHGCNVFINRQLIYNYPEQLFAEAG------IMAIE 315 (533)
T ss_pred EeCCCCCCcccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHCC------CEEEe
Confidence 99986 4555432 24678889999999999999999999998875 47887
Q ss_pred CCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHHHhhhchH
Q 007981 324 CPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNA 399 (582)
Q Consensus 324 ~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~ 399 (582)
++ ++.+|+|||++|| +++++++++++++||+|+.|+ ++++++++|++|..
T Consensus 316 ~v-----~~~~l~rIa~~tGa~iis~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~~~--------------------- 369 (533)
T PTZ00212 316 HA-----DFDGMERLAAALGAEIVSTFDTPEKVKLGHCDLIEEIMIGEDKLIRFSGCAK--------------------- 369 (533)
T ss_pred cC-----CHHHHHHHHHHhCCEEeecCCCCCHHHccCCceEEEEEECCeEEEEEEccCC---------------------
Confidence 44 4789999999999 889999999999999999998 67889999998753
Q ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhh
Q 007981 400 YLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDE 478 (582)
Q Consensus 400 ~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq 478 (582)
++.|||+|||+|+.+++|.||+++||++++|+++++| +||||||+|++|+.+|++++++..+.+
T Consensus 370 --------------~~~~TI~lrG~t~~~l~E~er~i~DAl~vv~~~i~~~~vVpGGGa~e~~ls~~L~~~~~~~~~~~- 434 (533)
T PTZ00212 370 --------------GEACTIVLRGASTHILDEAERSLHDALCVLSQTVKDTRVVLGGGCSEMLMANAVEELAKKVEGKK- 434 (533)
T ss_pred --------------CCEEEEEEECCChhHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhhCCCHH-
Confidence 3689999999999999999999999999999999998 999999999999999999987776665
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc----CCCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHH
Q 007981 479 QIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAA 554 (582)
Q Consensus 479 ~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~ 554 (582)
++++++|++||+.||++||+|||+|+.+++.+|++ .+.++|+|+.+|++.||++.|||||+.+|+++|+.|+++|+
T Consensus 435 ~~~i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~al~~A~e~a~ 514 (533)
T PTZ00212 435 SLAIEAFAKALRQIPTIIADNGGYDSAELVSKLRAEHYKGNKTAGIDMEKGTVGDMKELGITESYKVKLSQLCSATEAAE 514 (533)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeccCCcccchhhccceecHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999984 36689999999999999999999999999999999999999
Q ss_pred HHHChhHHhcCCCCCC
Q 007981 555 VVLTTEAVLADKIKQP 570 (582)
Q Consensus 555 ~iL~iD~iI~~~~p~~ 570 (582)
+|||||++|..+ |+.
T Consensus 515 ~iL~id~ii~~~-~~~ 529 (533)
T PTZ00212 515 MILRVDDIIRCA-PRQ 529 (533)
T ss_pred HHHhhhHhhhcC-Ccc
Confidence 999999999987 754
No 29
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.3e-89 Score=761.37 Aligned_cols=456 Identities=22% Similarity=0.314 Sum_probs=410.8
Q ss_pred hcccH-HHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007981 53 ILFGK-ESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (582)
Q Consensus 53 ~~~g~-~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e 130 (582)
..+|. +++..|+.||..|+++++|||||+||+|||++ .|+++|||||+||+|+|+++||+ |+|++++|++||++
T Consensus 12 ~~~~~~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hP~----akll~e~a~sqd~~ 87 (531)
T TIGR02346 12 HMSGLEEAVIKNIEACKELSNITRTSLGPNGMNKMVINHLDKLFVTNDAATILRELEVQHPA----AKLLVMASEMQENE 87 (531)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcccCCCcCCeEEEcCCCCEEEECcHHHHHHhccccCHH----HHHHHHHHHHHhhh
Confidence 44564 59999999999999999999999999999999 99999999999999999999997 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCc-ccC---CHHHHHHHHHHhcCC-----c
Q 007981 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSF-PVT---GRDDIKAVASISAGN-----D 201 (582)
Q Consensus 131 ~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~-~v~---~~~~L~~va~ts~~~-----~ 201 (582)
+||||||+|||+++||+++.+++++|+||..|++||+.|++.+++.|++++. +++ +.+.|.++|++++++ +
T Consensus 88 ~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~tsl~sK~~~~~ 167 (531)
T TIGR02346 88 IGDGTNLVIVLAGELLDKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVWEVEDVRNKKELIKALKASISSKQYGNE 167 (531)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhccccCchH
Confidence 9999999999999999999999999999999999999999999999999986 774 477899999988743 7
Q ss_pred hhHHHHHHHHHHHhccCC--c-----EEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc
Q 007981 202 EFIGNLIADAIIKIGADG--V-----ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (582)
Q Consensus 202 ~~l~~li~~Av~~v~~~g--~-----I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~ 272 (582)
+.|++++++|+.++++++ . |.+ ..|++++|+ ++++|++|++++.+ |++.++||||++++++
T Consensus 168 ~~ls~l~~~Ai~~v~~~~~~~~~~~~I~i~ki~G~s~~ds-~li~Gi~~~~~~~~---------~~k~i~n~kI~l~~~~ 237 (531)
T TIGR02346 168 DFLAQLVAKACSTVMPKNPENFNVDNIRVSKIMGGSISNS-EVLKGMVFNREAEG---------SVKRVKNAKVAVFSCP 237 (531)
T ss_pred HHHHHHHHHHHHHHhhcCCCcCChhHeeEEEecCCChhhc-eeEeeeEEeccCCC---------CceeccCCCEEEEecC
Confidence 899999999999998754 2 332 489999998 99999999998432 5678999999999987
Q ss_pred C-------------CCHH-----------hHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcC
Q 007981 273 I-------------STVK-----------EIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFG 328 (582)
Q Consensus 273 i-------------~~~~-----------el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~ 328 (582)
+ ++++ ++.++++++++.|+||||++++|+|.++++|..++ |+|||+++
T Consensus 238 l~~~~~~~~~~~~~~~~~~l~~~~~~e~~~i~~~l~~i~~~g~~lvi~~~~I~d~~~~~l~~~~------I~av~~~~-- 309 (531)
T TIGR02346 238 LDTATTETKGTVLIHNAEELLNYSKGEENQIEAYIKAIADSGVNVIVTGGSVGDMALHYCEKYN------IMVLKIPS-- 309 (531)
T ss_pred cCCCcccCceEEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCCcCHHHHHHHHHCC------cEEEecCC--
Confidence 4 2332 24567889999999999999999999999887653 68999887
Q ss_pred CCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHH
Q 007981 329 DGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRK 404 (582)
Q Consensus 329 ~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~ 404 (582)
..+|+|||.+|| +++++++++++++||+|+.|++ +++++.+++++.+
T Consensus 310 ---~~~l~~Ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~~~~~-------------------------- 360 (531)
T TIGR02346 310 ---KFELRRLCKTVGATPLARLGAPQPEEIGYVDSVYVSEIGGQKVTVFKQENG-------------------------- 360 (531)
T ss_pred ---HHHHHHHHHHHCCEEecccccCCHhHccccceEEEEEECCEEEEEEEccCC--------------------------
Confidence 468999999999 8889999999999999999986 5678888887642
Q ss_pred HHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHH
Q 007981 405 LSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGAD 483 (582)
Q Consensus 405 l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~ 483 (582)
.++++||+|||+|+.+++|++|+++||++++|+++++| +||||||+|++|+.+|+++++++.+.+ +++++
T Consensus 361 --------~~~~~tI~lrG~t~~~l~E~er~i~DAl~~~k~ai~~~~vVpGGG~~e~~ls~~L~~~~~~~~~~~-~~~~~ 431 (531)
T TIGR02346 361 --------DSKISTIILRGSTKNLLDDIERAIDDGVNVIKALVKDNRFLPGAGATEIELALRLKKYANKLPGLD-QYAIK 431 (531)
T ss_pred --------CCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHH-HHHHH
Confidence 24689999999999999999999999999999999999 999999999999999999877666654 68999
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCc--ccccccCcccccHHHHHHHHHHHHHHHHHHH
Q 007981 484 IVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGR--YEDLLSAGVADPCRVARCALQNAVSIAAVVL 557 (582)
Q Consensus 484 ~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~--i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL 557 (582)
+|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|+ +.||++.|||||+.||+++|+.|+++|++||
T Consensus 432 ~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~~~~~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL 511 (531)
T TIGR02346 432 KFAEAFEIIPRTLAENAGLNPNEVIPKLYAAHKKGNTSSGIDIEAESDGVKDASEAGIYDNLATKKWAIKLATEAAVTVL 511 (531)
T ss_pred HHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccceeeeCCCccccChhhcCceEcHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999763 567999999999 5999999999999999999999999999999
Q ss_pred ChhHHhcCCCCC
Q 007981 558 TTEAVLADKIKQ 569 (582)
Q Consensus 558 ~iD~iI~~~~p~ 569 (582)
|||++|..+ |.
T Consensus 512 ~id~ii~~~-~~ 522 (531)
T TIGR02346 512 RVDQIIMAK-PA 522 (531)
T ss_pred hhhHhhccC-CC
Confidence 999999887 64
No 30
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=9.7e-89 Score=752.45 Aligned_cols=457 Identities=23% Similarity=0.337 Sum_probs=414.2
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-C--CCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-S--DKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~--g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
+...|.+++..|++|+..++++++|||||+||+|||++ . |+++|||||+|||++|+++|| +|+|++++|++||
T Consensus 8 ~~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~~~G~~~iTnDG~tIlk~l~i~hP----~akll~~~a~~qd 83 (519)
T TIGR02341 8 QEERGENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSGSSESGIMVTNDGATILKSIGVDNP----AAKVLVDMSKVQD 83 (519)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEEeccCCCCCeEEeccHHHHHHHccCcCh----HHHHHHHHHHHhH
Confidence 46678899999999999999999999999999999999 5 999999999999999999999 5999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCC-----HHHHHHHHHHhcCCc--
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAGND-- 201 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~L~~va~ts~~~~-- 201 (582)
+++||||||+|||+++||+++.+++++|+||..|++||+.|.+.++++|+++++|+++ .+.|.++|+|+++++
T Consensus 84 ~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~L~~ia~t~l~ski~ 163 (519)
T TIGR02341 84 DEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSIDNGSDKTKFRDDLLNIARTTLSSKIL 163 (519)
T ss_pred hhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999853 478999999988753
Q ss_pred ----hhHHHHHHHHHHHhccC---CcEEEe--CCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc
Q 007981 202 ----EFIGNLIADAIIKIGAD---GVILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (582)
Q Consensus 202 ----~~l~~li~~Av~~v~~~---g~I~i~--~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~ 272 (582)
+.|++++++|+..+... ..|.+. +|++++|+ ++++|+++++.+.++ |+++++||+|++++++
T Consensus 164 ~~~~~~~s~l~~~av~~i~~~~~~~~i~i~k~~G~s~~~s-~l~~G~v~~~~~~~~--------~~~~~~n~~Ili~~~~ 234 (519)
T TIGR02341 164 SQHKDHFAQLAVDAVLRLKGSGNLDAIQIIKKLGGSLNDS-YLDEGFLLEKKIGVN--------QPKRIENAKILIANTP 234 (519)
T ss_pred hhHHHHHHHHHHHHHHHhccCCChhheEEEEccCCCcccc-eEEeeEEEeccCCCC--------CceeeccccEEEEecC
Confidence 78899999999988431 235553 89999999 899999999986552 6788999999999998
Q ss_pred CCC--------------HHhHH-----------HHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCc
Q 007981 273 IST--------------VKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (582)
Q Consensus 273 i~~--------------~~el~-----------~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~ 327 (582)
++. ++++. ++++.+.+.|++++++++.|++.++++|..++ |+||++++
T Consensus 235 Le~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~I~~~g~~~v~~~~~I~~~~~~~l~~~~------I~~v~~~~- 307 (519)
T TIGR02341 235 MDTDKVKVFGSRVRVDSTAKVAELEAAEKEKMKEKVEKILKHNINCFINRQLIYNYPEQLFADAG------VMAIEHAD- 307 (519)
T ss_pred CCCCccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCcCCHHHHHHHHHCC------cEEEecCC-
Confidence 753 22231 24678899999999999999999999988764 58998876
Q ss_pred CCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHH
Q 007981 328 GDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSR 403 (582)
Q Consensus 328 ~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~ 403 (582)
+.+|+|||++|| +++++++++++++||+|+.|++ +++++++|.+|++
T Consensus 308 ----~~~l~~ia~~tGa~ii~~~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~------------------------- 358 (519)
T TIGR02341 308 ----FEGIERLALVTGGEIVSTFDHPELVKLGSCDLIEEIMIGEDKLLKFSGVKL------------------------- 358 (519)
T ss_pred ----HHHHHHHHHHhCCEEecccccCCccccccCceEEEEEECCEEEEEEEcCCC-------------------------
Confidence 569999999999 8899999999999999999974 6789999998864
Q ss_pred HHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHH
Q 007981 404 KLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGA 482 (582)
Q Consensus 404 ~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i 482 (582)
++.|||+|||+|+.+++|.+|+++||++++|++++++ +||||||+|++|+++|++++++..+.+ ++++
T Consensus 359 ----------~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~-~~~i 427 (519)
T TIGR02341 359 ----------GEACTIVLRGATQQILDESERSLHDALCVLSQTVKESRTVLGGGCSEMLMSKAVAVEAQKVPGKE-ALAV 427 (519)
T ss_pred ----------CCEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhcCCChH-HHHH
Confidence 3589999999999999999999999999999999996 999999999999999999877666665 5899
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHC
Q 007981 483 DIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLT 558 (582)
Q Consensus 483 ~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~ 558 (582)
++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.||+++|+.|+++|++||+
T Consensus 428 ~~~a~Ale~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~ 507 (519)
T TIGR02341 428 EAFARALRQLPTIIADNAGFDSAELVAQLRAAHYNGNHTMGLDMEEGEIADMRKLGIIESYKVKRAVVSSAAEAAEVILR 507 (519)
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCCccceecCCCcccchhhccceEcHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999873 56799999999999999999999999999999999999999999
Q ss_pred hhHHhcCCCCC
Q 007981 559 TEAVLADKIKQ 569 (582)
Q Consensus 559 iD~iI~~~~p~ 569 (582)
||++|+.+ |+
T Consensus 508 id~ii~~~-~~ 517 (519)
T TIGR02341 508 VDNIIKAA-PR 517 (519)
T ss_pred HHHHHhcC-CC
Confidence 99999998 85
No 31
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=2.2e-89 Score=751.81 Aligned_cols=438 Identities=22% Similarity=0.327 Sum_probs=404.2
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.+...|.+++..|+.||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||. |+|++++|++||+
T Consensus 9 ~~~~~~~~~~~~ni~a~~~l~~~~~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~q~~ 84 (480)
T cd03337 9 TKRESGRKAQLGNIQAAKTVADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQDE 84 (480)
T ss_pred CccccHHHHHHHHHHHHHHHHHHHhccCCCCcCceEeEcCCCCEEEeccHHHHHHhccccChH----HHHHHHHHHhHHH
Confidence 347788999999999999999999999999999999999 99999999999999999999995 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCC------c
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------D 201 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~------~ 201 (582)
++||||||+|||+++||+++.+++++|+||..|++||++|.+.+++.|+++++|++ +.+.|.++++|++++ +
T Consensus 85 ~~GDGTtt~vvL~~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~ 164 (480)
T cd03337 85 EVGDGTTSVIILAGEILAVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIPVDVNDRAQMLKIIKSCIGTKFVSRWS 164 (480)
T ss_pred HhCCCcchhHhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHhccCcchhHH
Confidence 99999999999999999999999999999999999999999999999999999987 788999999999884 4
Q ss_pred hhHHHHHHHHHHHhccC--C---------cEEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEE
Q 007981 202 EFIGNLIADAIIKIGAD--G---------VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (582)
Q Consensus 202 ~~l~~li~~Av~~v~~~--g---------~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll 268 (582)
+.|++++++|+..++++ + .|++ .+|++++|+ ++++|++|++++.||. |+++++||+|++
T Consensus 165 ~~ls~lv~~Ai~~v~~~~~~~~~~id~~~~I~i~ki~Ggs~~ds-~li~Gvvi~k~~~~~~-------m~~~~~n~kIll 236 (480)
T cd03337 165 DLMCNLALDAVKTVAVEENGRKKEIDIKRYAKVEKIPGGEIEDS-RVLDGVMLNKDVTHPK-------MRRRIENPRIVL 236 (480)
T ss_pred HHHHHHHHHHHHhhccccCCCCCcCChhhceEEEEecCCCHHhc-ccccceEEeccCCCCC-------CCcEecCCCEEE
Confidence 78999999999999764 2 2444 479999998 9999999999999974 889999999999
Q ss_pred ecccCCCHHhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc
Q 007981 269 TDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL 347 (582)
Q Consensus 269 ~~~~i~~~~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~ 347 (582)
+++++++ ||||+++|++.++++|.+|+ |++|++ +++.+|+|||++|| ++++
T Consensus 237 l~~~Le~-----------------lvi~~k~I~d~al~~L~~~~------I~~v~~-----v~~~~L~rIa~~tGa~ii~ 288 (480)
T cd03337 237 LDCPLEY-----------------LVITEKGVSDLAQHYLVKAG------ITALRR-----VRKTDNNRIARACGATIVN 288 (480)
T ss_pred EecCcce-----------------EEEeCCCccHHHHHHHHHCC------cEEEEe-----CCHHHHHHHHHHHCCEEec
Confidence 9999876 99999999999999999875 578874 56899999999999 9999
Q ss_pred cccCCCccccce-eeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecC
Q 007981 348 TLAGATSDQLGI-ARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGA 423 (582)
Q Consensus 348 ~l~~l~~~~lG~-~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG 423 (582)
+++++++++||+ |+.+++ +++++++|++|+++ +.|||+|||
T Consensus 289 ~~~~l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~-----------------------------------~~~TIllrG 333 (480)
T cd03337 289 RPEELTESDVGTGAGLFEVKKIGDEYFTFITECKDP-----------------------------------KACTILLRG 333 (480)
T ss_pred chhhCCHHHcCCcccEEEEEEeCCeEEEEEEcCCCC-----------------------------------CEEEEEEEC
Confidence 999999999999 555543 56788999988654 589999999
Q ss_pred CCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCC
Q 007981 424 HTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGV 502 (582)
Q Consensus 424 ~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~ 502 (582)
+|+.+++|.||+++||+++++++++++ +||||||+|++|+++|++++++.++.+ ++++++|++||+.||++||+|||+
T Consensus 334 ~t~~~l~e~er~l~DAl~v~~~~~~~~~~vpGGGa~E~~ls~~l~~~~~~~~~~~-~~~~~~~a~al~~ip~~La~NaG~ 412 (480)
T cd03337 334 ASKDVLNEVERNLQDAMAVARNIILNPKLVPGGGATEMAVSHALSEKAKSIEGVE-QWPYKAVASALEVIPRTLAQNCGA 412 (480)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHhhcCCCHH-HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999996 999999999999999999887777765 589999999999999999999999
Q ss_pred ChHHHHHHhhcC-----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhc
Q 007981 503 DGTIVVEKTRTS-----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLA 564 (582)
Q Consensus 503 d~~~vl~kl~~~-----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 564 (582)
|+.+++.+|++. +.++|+|+.+|++.||++.|||||+.+|+++|++|+++|++|||||++|.
T Consensus 413 d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~gV~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 479 (480)
T cd03337 413 NVIRTLTELRAKHAQGENSTWGIDGETGDIVDMKELGIWDPLAVKAQTYKTAIEAACMLLRIDDIVS 479 (480)
T ss_pred CHHHHHHHHHHHHHccCCCeECeeccCCCcccchhccCeEcHHHHHHHHHHHHHHHHHHhhhhheec
Confidence 999999999873 45799999999999999999999999999999999999999999999874
No 32
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=4.1e-87 Score=732.73 Aligned_cols=437 Identities=35% Similarity=0.517 Sum_probs=406.0
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007981 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (582)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e 130 (582)
...+|.+++..|++||..++++++|||||+||+|||++ .|+++|||||+||+++|+++||. |+|+++++++||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~hp~----a~ll~~~~~~~~~~ 77 (464)
T cd00309 2 EREFGEEARLSNINAAKALADAVKTTLGPKGMDKMLVDSLGDPTITNDGATILKEIEVEHPA----AKLLVEVAKSQDDE 77 (464)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhcccCCCcCcEEEEcCCCCeEEEccHHHHHHhccCcCHH----HHHHHHHHHHHHhH
Confidence 45688999999999999999999999999999999999 99999999999999999999995 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcc--cCCHHHHHHHHHHhcC------Cch
Q 007981 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFP--VTGRDDIKAVASISAG------NDE 202 (582)
Q Consensus 131 ~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~--v~~~~~L~~va~ts~~------~~~ 202 (582)
+||||||+++|+++|++++.+++++|+||..|++||+.|++.+++.|++++.+ +.+.+.|.++|+|+++ +++
T Consensus 78 ~GDGTtt~viL~~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~ 157 (464)
T cd00309 78 VGDGTTTVVVLAGELLKEAEKLLAAGIHPTEIIRGYEKAVEKALEILKEIAVPIDVEDREELLKVATTSLNSKLVSGGDD 157 (464)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCccCCCCHHHHHHHhHhcccccccccchH
Confidence 99999999999999999999999999999999999999999999999999999 5688999999999998 688
Q ss_pred hHHHHHHHHHHHhcc------CCcEEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCC
Q 007981 203 FIGNLIADAIIKIGA------DGVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIS 274 (582)
Q Consensus 203 ~l~~li~~Av~~v~~------~g~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~ 274 (582)
.+++++++|+..+++ .+.|++ ..|++++|| ++++|++|+++|.||+ |+++++||+|++++++++
T Consensus 158 ~l~~l~~~Ai~~v~~~~~~~~~~~I~i~k~~gg~~~ds-~li~Gi~~~~~~~~~~-------m~~~~~n~~Ili~~~~Le 229 (464)
T cd00309 158 FLGELVVDAVLKVGKENGDVDLGVIRVEKKKGGSLEDS-ELVVGMVFDKGYLSPY-------MPKRLENAKILLLDCKLE 229 (464)
T ss_pred HHHHHHHHHHHHhccccCccccceEEEEecCCCCcccc-eeeeeEEEecCCCCCC-------CceeecCceEEEEecCcc
Confidence 999999999999987 466666 479999999 8999999999999997 578999999999999988
Q ss_pred CHHhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCC
Q 007981 275 TVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGAT 353 (582)
Q Consensus 275 ~~~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~ 353 (582)
. |||++++|+++++++|.+++ |++|++ +++++|+|||++|| ++++++++++
T Consensus 230 ~-----------------lIi~~~~I~~~al~~L~~~~------I~~v~~-----~~~~~L~~Ia~~tGa~ii~~~~~~~ 281 (464)
T cd00309 230 Y-----------------VVIAEKGIDDEALHYLAKLG------IMAVRR-----VRKEDLERIAKATGATIVSRLEDLT 281 (464)
T ss_pred e-----------------EEecCCCcCHHHHHHHHHCC------eEEEEe-----CCHHHHHHHHHHhCCEEecccccCC
Confidence 7 88888899999999998754 588875 56899999999999 8888999999
Q ss_pred ccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHH
Q 007981 354 SDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELE 430 (582)
Q Consensus 354 ~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~ 430 (582)
++++|+|+.|++ +++++++|.++.. ++.|||+|||+|+.+++
T Consensus 282 ~~~lG~~~~v~~~~~g~~~~~~~~~~~~-----------------------------------~~~~TIllrG~t~~~l~ 326 (464)
T cd00309 282 PEDLGTAGLVEETKIGDEKYTFIEGCKG-----------------------------------GKVATILLRGATEVELD 326 (464)
T ss_pred cccCccccEEEEEEEcCeeEEEEEecCC-----------------------------------CCEEEEEEeCCcHHHHH
Confidence 999999999986 4567888887753 35899999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 007981 431 DRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVE 509 (582)
Q Consensus 431 E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~ 509 (582)
|+||+++||+++++++++++ +|||||++|++|+++|++++.+.++. +++++++|++||+.||++|++|||+|+.+++.
T Consensus 327 e~~r~i~dal~~~~~~~~~~~~vpGGGa~E~~ls~~L~~~~~~~~~~-~~~~~~~~a~aL~~ip~~L~~NaG~d~~~~~~ 405 (464)
T cd00309 327 EAERSLHDALCAVRAAVEDGGIVPGGGAAEIELSKALEELAKTLPGK-EQLGIEAFADALEVIPRTLAENAGLDPIEVVT 405 (464)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcccCCcHHHHHHHHHHHHHhcccchH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 99999999999999999996 99999999999999999998766665 46899999999999999999999999999999
Q ss_pred HhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhc
Q 007981 510 KTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLA 564 (582)
Q Consensus 510 kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~ 564 (582)
+|++. ..++|+|+.+|++.||++.|||||+.+|+++|+.|+|+|++||+||++|+
T Consensus 406 ~l~~~~~~~~~~~g~d~~~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~ 464 (464)
T cd00309 406 KLRAKHAEGGGNAGGDVETGEIVDMKEAGIIDPLKVKRQALKSATEAASLILTIDDIIV 464 (464)
T ss_pred HHHHHhhccCCCeeEECCCCcEeehhhccCeecHHHHHHHHHHHHHHHHHHHhHHHHhC
Confidence 99874 34789999999999999999999999999999999999999999999984
No 33
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=4.3e-87 Score=732.27 Aligned_cols=437 Identities=22% Similarity=0.308 Sum_probs=398.2
Q ss_pred ccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhcCC
Q 007981 55 FGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLAGD 133 (582)
Q Consensus 55 ~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e~GD 133 (582)
.+.+++..|+++|..|++++++||||+||+|||++ .|+++|||||+||+++|+++||+ |+|++++|++||+++||
T Consensus 5 ~~~~~~~~ni~a~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP~----a~ll~~~a~~~~~~~GD 80 (472)
T cd03341 5 GLEEAVLRNIEACKELSQITRTSYGPNGMNKMVINHLEKLFVTSDAATILRELEVQHPA----AKLLVMASQMQEEEIGD 80 (472)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEEcCCCCEEEeCcHHHHHHhccccCHH----HHHHHHHHHHHhhhhCC
Confidence 35789999999999999999999999999999999 99999999999999999999997 99999999999999999
Q ss_pred CcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcc-cC---CHHHHHHHHHHhcC-----CchhH
Q 007981 134 GTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFP-VT---GRDDIKAVASISAG-----NDEFI 204 (582)
Q Consensus 134 GTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~-v~---~~~~L~~va~ts~~-----~~~~l 204 (582)
||||+|+|+++||+++.+++++|+||..|++||+.|++.+++.|++++.+ ++ +.+.+.++++++++ ++++|
T Consensus 81 GTTt~vvL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l 160 (472)
T cd03341 81 GTNLVVVLAGELLEKAEELLRMGLHPSEIIEGYEKALKKALEILEELVVYKIEDLRNKEEVSKALKTAIASKQYGNEDFL 160 (472)
T ss_pred ChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHhcccccchHHHH
Confidence 99999999999999999999999999999999999999999999999865 53 46778899888864 36799
Q ss_pred HHHHHHHHHHhccC--CcE-----E--EeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCC
Q 007981 205 GNLIADAIIKIGAD--GVI-----L--IESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIST 275 (582)
Q Consensus 205 ~~li~~Av~~v~~~--g~I-----~--i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~ 275 (582)
++++++|+..++++ |.+ + ..+|++++|| ++++|++|++... .++++++||+|++++++++.
T Consensus 161 ~~l~~~a~~~~~~~~~~~~~~~~i~i~ki~Gg~~~ds-~lv~Giv~~~~~~---------~~~~~~~n~~Ili~~~~Le~ 230 (472)
T cd03341 161 SPLVAEACISVLPENIGNFNVDNIRVVKILGGSLEDS-KVVRGMVFKREPE---------GSVKRVKKAKVAVFSCPFDI 230 (472)
T ss_pred HHHHHHHHHHHhhccCCcCChhHeEEEEecCCCcccc-eEEeeEEEccccC---------CCceeccCCcEEEEeccccC
Confidence 99999999999875 432 2 2489999999 9999999987532 24578999999999999887
Q ss_pred HHhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCc
Q 007981 276 VKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATS 354 (582)
Q Consensus 276 ~~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~ 354 (582)
|++|||++++|+++++++|.++ +|+|||+++ +.+|+|||++|| +++.+++++++
T Consensus 231 --------------g~~lvi~~~~I~d~al~~l~~~------~I~av~~~~-----~~~Le~Ia~~tGa~ii~~~~~l~~ 285 (472)
T cd03341 231 --------------GVNVIVAGGSVGDLALHYCNKY------GIMVIKINS-----KFELRRLCRTVGATPLPRLGAPTP 285 (472)
T ss_pred --------------CCeEEEECCCCCHHHHHHHHHC------CeEEEEeCC-----HHHHHHHHHHhCCEEecccccCCH
Confidence 8999999999999999997654 468999887 688999999999 88999999999
Q ss_pred cccceeeEEEEe---cccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHH
Q 007981 355 DQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELED 431 (582)
Q Consensus 355 ~~lG~~~~v~~~---~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E 431 (582)
++||+|+.|++. ++++++|+++++. ++++||+|||+|+.+++|
T Consensus 286 ~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------------------~~~~TI~lrG~t~~~l~E 331 (472)
T cd03341 286 EEIGYCDSVYVEEIGDTKVVVFRQNKED----------------------------------SKIATIVLRGATQNILDD 331 (472)
T ss_pred hHCCCceEEEEEEECCeeEEEEEccCCC----------------------------------CCeEEEEEECCCHHHHHH
Confidence 999999999874 4889999987531 368999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 007981 432 RKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEK 510 (582)
Q Consensus 432 ~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~k 510 (582)
.||+++||++++|+++++| +|||||++|++++.+|++++.+..+.+ ++++++|++||+.||++|++|||+|+.+++.+
T Consensus 332 ~er~i~DAl~~~~~ai~~~~vVpGGG~~e~~ls~~l~~~~~~~~~~~-~~~~~~~a~al~~ip~~L~~NaG~d~~~~~~~ 410 (472)
T cd03341 332 VERAIDDGVNVFKSLTKDGRFVPGAGATEIELAKKLKEYGEKTPGLE-QYAIKKFAEAFEVVPRTLAENAGLDATEVLSE 410 (472)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEeCcCHHHHHHHHHHHHHhhccCCHH-HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 9999999999999999999 999999999999999999877666654 68999999999999999999999999999999
Q ss_pred hhc---C-CCcceeecCCC--cccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcC
Q 007981 511 TRT---S-DWRFGYNAMTG--RYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLAD 565 (582)
Q Consensus 511 l~~---~-~~~~Gid~~~g--~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~ 565 (582)
|+. . +.++|||+.+| ++.||++.|||||+.||+++|+.|+|+|++|||||++|..
T Consensus 411 l~~~h~~~~~~~Gid~~~g~~~~~d~~~~gI~dp~~vk~~~l~~A~e~a~~iL~id~ii~~ 471 (472)
T cd03341 411 LYAAHQKGNKSAGVDIESGDEGTKDAKEAGIFDHLATKKWAIKLATEAAVTVLRVDQIIMA 471 (472)
T ss_pred HHHHHHccCCeeeeeccCCCCCccChhhccceecHHHHHHHHHHHHHHHHHHhhhcceeec
Confidence 975 2 56799999999 9999999999999999999999999999999999999864
No 34
>KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.1e-88 Score=677.10 Aligned_cols=461 Identities=21% Similarity=0.304 Sum_probs=424.7
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
..+-..|.-..-+|+.+|..+++.++|||||+||||+|++ .|+++|||||+||||-|++-||. ||.|+++|++||
T Consensus 12 gtd~sqGk~QlvSNInaC~~v~e~~rtTLGP~GmDkLivd~~g~~tIsNDGATIlKlldivhPa----aktlVdia~sQD 87 (543)
T KOG0361|consen 12 GTDPSQGKGQLVSNINACTAVAEALRTTLGPRGMDKLIVDSKGKTTISNDGATILKLLDIVHPA----AKTLVDIARSQD 87 (543)
T ss_pred ccCcccCchhhhhchHHHHHHHHHHHhccCccccceeeecCCCcEEEecCcHHHHHHHhhcChh----HHHHHHHHhhcc
Confidence 5566778888899999999999999999999999999999 99999999999999999999995 999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--C----HHHHHHHHHHhcCC--
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--G----RDDIKAVASISAGN-- 200 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~----~~~L~~va~ts~~~-- 200 (582)
.|+||||||||+||+|+|+++..+++.|+||..|+++|++|...+++.|++++..++ + ++.|.+.|.|++++
T Consensus 88 aEVGDGTTSVv~la~E~lk~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~~~~~r~lL~KcA~T~lsSKl 167 (543)
T KOG0361|consen 88 AEVGDGTTSVVLLAAEFLKEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSSKTELRELLEKCAATALSSKL 167 (543)
T ss_pred ccccCCceeEeeeHHHHHHhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccchhhHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999999999999999999999999999998887 2 46788999998764
Q ss_pred ----chhHHHHHHHHHHHhccC---Cc--EEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecc
Q 007981 201 ----DEFIGNLIADAIIKIGAD---GV--ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (582)
Q Consensus 201 ----~~~l~~li~~Av~~v~~~---g~--I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~ 271 (582)
+++|+++++||+..+..+ .. |++.+||+++|| .+++|+.|++.|.+.+|. .+|+.+.||||++++.
T Consensus 168 I~~ek~fF~~MvVDAV~~ld~~l~~~mIGIKKV~GG~~~dS-~lv~GVAFkKtFsYAGfE----qqPKk~~NpkIl~Lnv 242 (543)
T KOG0361|consen 168 IRQEKEFFAKMVVDAVLTLDNDLDLNMIGIKKVPGGAMEDS-LLVNGVAFKKTFSYAGFE----QQPKKFLNPKILLLNV 242 (543)
T ss_pred hhhhHHHHHHHHHHHHHhhccccchhhcceeecCCCccchh-hhccceeeeehccccchh----hCccccCCceEEEEee
Confidence 699999999999998743 22 666899999999 799999999999999884 4678899999999987
Q ss_pred cC-------------CCHHhHH-----------HHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCc
Q 007981 272 KI-------------STVKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (582)
Q Consensus 272 ~i-------------~~~~el~-----------~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~ 327 (582)
.+ .++++++ +.|+++..+|.++|+..-.|.|.|.+||..+.+ .||
T Consensus 243 ELElKaEkdNAEiRv~~v~eyQ~iVDAEW~Ii~~KL~ki~~sGAnVVLSkLpIGD~ATQyFAdrdi-----FCA------ 311 (543)
T KOG0361|consen 243 ELELKAEKDNAEIRVDNVEEYQAIVDAEWNIIYDKLDKIHESGANVVLSKLPIGDLATQYFADRDI-----FCA------ 311 (543)
T ss_pred eeeecccccCceeecCCHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEecccchHHHHHHhhccCc-----eec------
Confidence 53 4555554 457889999999999999999999999998764 354
Q ss_pred CCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHH
Q 007981 328 GDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSR 403 (582)
Q Consensus 328 ~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~ 403 (582)
|+++.++|+|...+|| ++..+..++.++.||+|..++ +++++|-+|+||+..
T Consensus 312 GRV~~eDl~Rv~~acGGsi~tt~~~i~~~~LG~C~~FeE~QvG~eRyN~Fegcp~a------------------------ 367 (543)
T KOG0361|consen 312 GRVPEEDLNRVMQACGGSIQTTVSDIKEEVLGTCALFEERQVGGERYNLFEGCPKA------------------------ 367 (543)
T ss_pred CcCCHHHHHHHHHhcCcchhhhhhhcchhhcchhhhHHHHhhcchhhhhhcCCCcc------------------------
Confidence 8999999999999999 777888999999999999997 489999999999753
Q ss_pred HHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHH
Q 007981 404 KLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGA 482 (582)
Q Consensus 404 ~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i 482 (582)
+.||+++||+.++.++|.+|++|||++++|.|+++. +|+|||++||++|+.|++|+.++++.+ |+-+
T Consensus 368 -----------ktcTliLRGgaeqfieE~eRSlHDAImIVrralkn~~vVaGGGaiEMElSk~lRd~S~ti~gK~-q~~i 435 (543)
T KOG0361|consen 368 -----------KTCTLILRGGAEQFIEETERSLHDAIMIVRRALKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQ-QLFI 435 (543)
T ss_pred -----------ceeEEEEeccHHHHHHHHhhhhhhHHHHHHHHhccCcEeeCCceeeehHHHHHHHhhcccCcHH-HHHH
Confidence 479999999999999999999999999999999998 999999999999999999999999875 5789
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHC
Q 007981 483 DIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLT 558 (582)
Q Consensus 483 ~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~ 558 (582)
.+|++|||.||++||+|+|+|..+++.|||.. +.|+|+|.+++.+.|+++.+||||..||++++..|+|.|++||.
T Consensus 436 ~A~akalEvIPrqLc~NaGfDa~~ilnkLR~rHA~G~~w~Gvdi~~e~i~dn~~~~VwEP~~VK~Nai~aateAa~lIls 515 (543)
T KOG0361|consen 436 NAYAKALEVIPRQLCDNAGFDATNILNKLRQRHAQGEKWYGVDINTEGIADNFEKFVWEPSIVKINAITAATEAACLILS 515 (543)
T ss_pred HHHHHHHHHhHHHHhhhcCCcHHHHHHHHHHHhhcCCceeeeeecccchhhHHHhhccChHHHHHHHHHHHHHhhhheEe
Confidence 99999999999999999999999999999884 78999999999999999999999999999999999999999999
Q ss_pred hhHHhcCC
Q 007981 559 TEAVLADK 566 (582)
Q Consensus 559 iD~iI~~~ 566 (582)
+|+.|+..
T Consensus 516 vDeTikn~ 523 (543)
T KOG0361|consen 516 VDETIKNP 523 (543)
T ss_pred hhhhhcCC
Confidence 99999886
No 35
>KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-83 Score=643.53 Aligned_cols=463 Identities=21% Similarity=0.312 Sum_probs=415.8
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
-++..+..+.|.+|++++++++++++|||||+||||||.. .|+++|||||+||||.|++-||. |+||++++..||
T Consensus 18 f~d~ekp~~vR~sni~Aa~avadairTSLGPkGmDKMIq~~~gev~iTNDGaTILk~m~vlhP~----akmLvelS~aQD 93 (534)
T KOG0358|consen 18 FKDKEKPEQVRFSNIQAARAVADAIRTSLGPKGMDKMIQTGKGEVIITNDGATILKQMNVLHPA----AKMLVELSAAQD 93 (534)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHhccCccchhhHhhcCCCcEEEecChHHHHHHHhhhChH----HHHHHHhhhhcc
Confidence 4566677899999999999999999999999999999999 99999999999999999999996 999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCC------
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------ 200 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~------ 200 (582)
.++||||||||+|||+||+.+.+|+++|+||..|.+.|+.|.+.++++|++|+.|++ +++.|.+.|+||+|+
T Consensus 94 ~eaGDGTTsVVilaGaLL~~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~velsdre~Li~~atTsLnSKvvSq~ 173 (534)
T KOG0358|consen 94 SEAGDGTTSVVILAGALLEAAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPVELSDRESLIKSATTSLNSKVVSQY 173 (534)
T ss_pred ccccCCceEEEEehhhHHHHHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCcccCcHHHHHHHHHhHhhHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999887 788899999999875
Q ss_pred chhHHHHHHHHHHHhccC--------CcEEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEec
Q 007981 201 DEFIGNLIADAIIKIGAD--------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (582)
Q Consensus 201 ~~~l~~li~~Av~~v~~~--------g~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~ 270 (582)
...++.+.+||+.++-.. ..|++ +.|++++|+ ++++|++|++..... ..|..++++||-++.
T Consensus 174 s~llapmAVdAV~kv~dp~~~~nvdlkdIkivkklGgtvdDt-e~i~glvl~~~~~~~-------~gptriekAkIglIQ 245 (534)
T KOG0358|consen 174 SSLLAPMAVDAVLKVIDPENATNVDLKDIKIVKKLGGTVDDT-ELIKGLVLTQKASKS-------AGPTRIEKAKIGLIQ 245 (534)
T ss_pred ccccchHHHHHHHhccCcccccccchhhhhhHHhhCCccchh-hhhcceEEeeecccC-------CCcchhhhceeeEEE
Confidence 478899999999998541 12444 689999999 999999999875432 156788999999887
Q ss_pred ccCCCH-------------H-----------hHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCC
Q 007981 271 QKISTV-------------K-----------EIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (582)
Q Consensus 271 ~~i~~~-------------~-----------el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~ 326 (582)
+.|+-+ . .+++++++++++|+|++++|++|=.++++-|..+.+.. ++|++||
T Consensus 246 F~iS~PKtdmen~iiv~DyaqMdrilkeER~YiL~mcKkIKk~gcnvLliQKSILRdavsDLAlHfL~k-lkimvik--- 321 (534)
T KOG0358|consen 246 FQISPPKTDMENQIIVNDYAQMDRILKEERQYILNMCKKIKKAGCNVLLIQKSILRDAVSDLALHFLAK-LKIMVIK--- 321 (534)
T ss_pred EEecCCCCCcccceEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEeHHHHHHHHHHHHHHHHHh-CcEEEEc---
Confidence 754322 1 14567889999999999999999888877777776643 6789987
Q ss_pred cCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE----ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHH
Q 007981 327 FGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV----KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYL 401 (582)
Q Consensus 327 ~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~----~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e 401 (582)
|+.++++|-+++.+| .++.+++.++++.||+++.+++ ++.+++-+.|+.+.
T Consensus 322 --dieRediefick~l~c~Pia~id~f~~d~Lg~adlveE~~~~G~gkivk~tg~~n~---------------------- 377 (534)
T KOG0358|consen 322 --DIEREDIEFICKTLGCKPIADIDHFTADKLGSADLVEETDSSGEGKIVKITGIQNA---------------------- 377 (534)
T ss_pred --cccHhhHHHHHhhcCCeecchhhhcChhhcCcchhhhhcccCCCccEEEEEEeecC----------------------
Confidence 667899999999999 9999999999999999999985 34477777776543
Q ss_pred HHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHH
Q 007981 402 SRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQI 480 (582)
Q Consensus 402 ~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~ 480 (582)
|..++|++||+++..++|.+|++|||||++|+.++.. ++||||+.||.++..|.+++.+..+.+ .|
T Consensus 378 ------------g~tvsil~RGsn~lvleEaeRSlhDALCVirCLvk~r~li~GGGapEieia~~L~~~a~t~eG~~-~y 444 (534)
T KOG0358|consen 378 ------------GRTVSILLRGSNKLVLEEAERSLHDALCVIRCLVKKRALIAGGGAPEIEIALRLSALARTLEGVE-AY 444 (534)
T ss_pred ------------CCceEEEEecCchhhhHHHhhhhhhhhHHHHhhhhccceecCCCCcchHHHHHHHHHHhhhccch-hH
Confidence 5679999999999999999999999999999999997 999999999999999999999888876 48
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHH
Q 007981 481 GADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVV 556 (582)
Q Consensus 481 ~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~i 556 (582)
.+++|++|||.||.+||+|||++|+.++++||+. +++.|++...|.+.||++..|+.|+.|-.++++.|+|++.+|
T Consensus 445 c~rafA~AlEvIP~tLAeNAGLnpI~~VtELRn~haqge~~aGInVRkg~~tni~ee~VvQPllVs~SaitlA~Etvr~I 524 (534)
T KOG0358|consen 445 CWRAFADALEVIPYTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGGITNILEENVVQPLLVSISAITLATETVRSI 524 (534)
T ss_pred HHHHHHHHHhcccHhHHhhCCCChhhHHHHHHHHHhcCCcccceeeecccchhhHHHhcccceeeeHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999984 689999999999999999999999999999999999999999
Q ss_pred HChhHHhcC
Q 007981 557 LTTEAVLAD 565 (582)
Q Consensus 557 L~iD~iI~~ 565 (582)
|+||+|+..
T Consensus 525 LKIDDIv~a 533 (534)
T KOG0358|consen 525 LKIDDIVNA 533 (534)
T ss_pred hhhhhhccc
Confidence 999999854
No 36
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=2.5e-80 Score=682.55 Aligned_cols=439 Identities=30% Similarity=0.488 Sum_probs=402.1
Q ss_pred HHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhcCCCcchHHHHHHHHHHH
Q 007981 70 LADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKS 148 (582)
Q Consensus 70 la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e~GDGTTtvvvLa~~Ll~~ 148 (582)
|++++++||||+|++|||++ .|+++|||||+||+++|+++||+ |+|+++++++|++++||||||+|+|+++||++
T Consensus 1 l~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~~P~----~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~~ 76 (485)
T PF00118_consen 1 LADIVKSSLGPKGRDKLIVNDSGKIIITNDGATILKSLKINHPI----AKLLVEASKSQDEEVGDGTTSVVLLACELLRN 76 (485)
T ss_dssp HHHHHGCCSSTTS-EEEEEESSSSEEEESSHHHHHHHSTBSSHH----HHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHH
T ss_pred ChhhcccCcCCCCCeEEEEcCCCCeEEEechhHHHHHhhhccch----hhhHHHhHHHHHhhhccccceeeecccchhhh
Confidence 68999999999999999999 99999999999999999999997 99999999999999999999999999999999
Q ss_pred HHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCH-HHHHHHHHHhcCCc------hhHHHHHHHHHHHhccC---
Q 007981 149 GMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGR-DDIKAVASISAGND------EFIGNLIADAIIKIGAD--- 218 (582)
Q Consensus 149 ~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~-~~L~~va~ts~~~~------~~l~~li~~Av~~v~~~--- 218 (582)
+.+++++|+||..|++||+.|.+.+++.|++++.++++. +.|+++|+|+++++ +.|++++++|+..+..+
T Consensus 77 ~~~li~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~~~~~~~~l~~i~~t~l~~k~~~~~~~~l~~li~~a~~~~~~~~~~ 156 (485)
T PF00118_consen 77 ALKLIKKGIHPQEIIRGLQEALKIILEYLEKISIPINNDDESLLNIAKTSLNSKISSSWSDHLSKLIVDAIKSIKSNFDL 156 (485)
T ss_dssp HHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHSEESTSTSHHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHHHTTTHHG
T ss_pred hhhhhhccccccchhhhhhhhhhhhhhhhhhhhccccccchhhhhhhcccccccccccchhhhhhhHHHHHHhhcccccc
Confidence 999999999999999999999999999999999999876 89999999999987 89999999999444321
Q ss_pred CcE--EEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHh------------------
Q 007981 219 GVI--LIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKE------------------ 278 (582)
Q Consensus 219 g~I--~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~e------------------ 278 (582)
+.+ ....|++.+|| ++++|++|+++|.++ +|+++++||+|++++++++..+.
T Consensus 157 ~~i~i~~i~g~~~~dS-~li~Giv~~~~~~~~-------~~~~~~~~~~Ill~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 228 (485)
T PF00118_consen 157 DNIKIIKIPGGSISDS-ELINGIVLDKGFSSP-------NMPKKIENPKILLLNCPLEYSKSFKSEIRITSPEQLDELSK 228 (485)
T ss_dssp GGEEEEEEESSSSGGE-EEESEEEESSSBSST-------TSBSEEESEEEEEESSEBSSCCHSTEEEEESSTHHHHHHHH
T ss_pred cchhhhhhcccccccc-ccccceeeecccccc-------ccccccccceEEeeecccccccccccccchhhHHHHHHHHh
Confidence 223 33578888998 899999999999997 37888999999999999877665
Q ss_pred -----HHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCC
Q 007981 279 -----IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGA 352 (582)
Q Consensus 279 -----l~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l 352 (582)
+.++++++.+.|+++||++++|++.++++|..|++ .++ .++++.+|++|+.+|| .++++++++
T Consensus 229 ~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I------~~i-----~~v~~~~l~~i~~~tg~~ii~~~~~l 297 (485)
T PF00118_consen 229 QEKKYLKKILEKIINLGVNLIISQKSIDDEALQYLNKNGI------LVI-----RRVSKEDLERIARATGASIISSLDDL 297 (485)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEESSEBTHHHHHHHHHCTH------EEE-----SSEHHHHHHHHHHHHTSBEBSSCGGS
T ss_pred hhhhhhccccceEeeeccceeeeecccccccchhhhhhhh------hcc-----ccchHHHHHhhhcccCCcEecccccc
Confidence 77899999999999999999999999999998875 444 4567999999999999 889999999
Q ss_pred CccccceeeEE---EEecccEEEEeC--CCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHh
Q 007981 353 TSDQLGIARKV---TVKSNSTTIVAD--PYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEV 427 (582)
Q Consensus 353 ~~~~lG~~~~v---~~~~~~~~~~~~--~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~ 427 (582)
+++++|+|+.+ .+++++++++++ +. .+..+||+|||+|+.
T Consensus 298 ~~~~lG~~~~v~~~~i~~~~~~~~~~~~~~-----------------------------------~~~~~Till~g~t~~ 342 (485)
T PF00118_consen 298 SDEDLGFCKSVEEREIGNKKYIFIEGIGCL-----------------------------------SSKICTILLRGPTEF 342 (485)
T ss_dssp TGGGSEEEEEEEEEEETSSEEEEEEEHSES-----------------------------------SSSEEEEEEEESSHH
T ss_pred cchhhhhhhhhhhccccccccccccccccc-----------------------------------ccCceEEEeccccch
Confidence 99999999999 568899999984 32 346899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 007981 428 ELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTI 506 (582)
Q Consensus 428 ~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~ 506 (582)
+++|++|+++||+++++++++++ +|||||++|++|+++|++++.+.++. +++++++|++||+.||++|++|||+|+.+
T Consensus 343 ~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~-~~~~~~~~a~aL~~ip~~L~~NaG~~~~~ 421 (485)
T PF00118_consen 343 ELEERERSIHDALKVLRSALKDGGVVPGGGATELHLSKALRKYAKSLSGK-EQLAIEAFADALESIPKTLAQNAGLDSSE 421 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSEEEETTTHHHHHHHHHHHHHHHCSSSH-HHHHHHHHHHHTTHHHHHHHHHTTSTHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccCCceeecCcchhhhhhhhHHHhhhcccCc-hhhhHHHHHHHHHHhhhhhhhccCCCcee
Confidence 99999999999999999999987 99999999999999999988776665 56899999999999999999999999999
Q ss_pred HHHHhhc---CCCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCC
Q 007981 507 VVEKTRT---SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIK 568 (582)
Q Consensus 507 vl~kl~~---~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p 568 (582)
++++|+. +++++|||+.+|++.||.+.|||||+.+|+++|+.|+++|++||+||++|..+ |
T Consensus 422 ~~~~l~~~h~~~~~~g~d~~~~~i~~~~~~gi~dp~~~k~~~l~~A~~~a~~iL~id~iI~~~-~ 485 (485)
T PF00118_consen 422 VISKLKSFHNNGNNYGIDLDTGEIVDMKEAGILDPLLVKISALKSAVEIASLILRIDEIIMAK-P 485 (485)
T ss_dssp HHHHHHHHHHSTTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEES-S
T ss_pred eehhhHhhhccccccCcCccCCceeccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence 9999988 57899999999999999999999999999999999999999999999999987 5
No 37
>KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-79 Score=611.69 Aligned_cols=461 Identities=21% Similarity=0.332 Sum_probs=413.0
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec---CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE---SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~---~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
.-..|+.||.+.+-|+..+.|+|||||||+||+||+.+ .|.+.+||||+||||++.+.+| +||+|+++|+-||
T Consensus 12 ~eErge~ArlssfvGaiaigDlvKsTLGPKGMdKiL~s~~~~~~v~VTNDGAtILksi~vDnp----aAkvLv~~S~vQD 87 (527)
T KOG0363|consen 12 TEERGENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSTGRAGTVMVTNDGATILKSIGVDNP----AAKVLVDISKVQD 87 (527)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhccCcchHHHHHhccCCCCceEEecchHHHHHhcCCCCc----hhhheeccccccc
Confidence 34468899999999999999999999999999999998 5789999999999999999999 5999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCC-----HHHHHHHHHHhcCC---
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAGN--- 200 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~L~~va~ts~~~--- 200 (582)
+|+|||||||+|||++||+|+.+|+...+||+.|+.||++|...+++.|.+.++.-.+ +++|.++|+|.+++
T Consensus 88 ~EvGDGTTSV~vlaaeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kfr~DLl~iarTTL~SKiL 167 (527)
T KOG0363|consen 88 DEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKFREDLLKIARTTLSSKIL 167 (527)
T ss_pred cccCCCceehHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999887765431 57899999998764
Q ss_pred ---chhHHHHHHHHHHHhccCCc-----EEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc
Q 007981 201 ---DEFIGNLIADAIIKIGADGV-----ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (582)
Q Consensus 201 ---~~~l~~li~~Av~~v~~~g~-----I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~ 272 (582)
+++|++|+++|+.++...+. |.++.||+++|| .+-+|+.+++.+-. ..|+.++||+||+-+.+
T Consensus 168 sq~kehFaelavdAV~rLkGs~nL~~IqIIK~~Gg~l~dS-fLDeGFlL~K~igv--------~qpkriena~iLIANT~ 238 (527)
T KOG0363|consen 168 SQDKEHFAELAVDAVLRLKGSTNLEAIQIIKKLGGKLEDS-FLDEGFLLDKKIGV--------NQPKRIENAKILIANTP 238 (527)
T ss_pred HhhHHHHHHHHHHHHHHhcCCCCccceeeehhcCCccccc-cccccceeccccCC--------CCcccccccceEEecCC
Confidence 69999999999999855432 444799999999 79999999987533 26788999999998876
Q ss_pred CC--------------CHH-----------hHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCc
Q 007981 273 IS--------------TVK-----------EIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (582)
Q Consensus 273 i~--------------~~~-----------el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~ 327 (582)
.. +.. .+...++++.++|+|+.|...=|.++-.++|.... |+++..-.|
T Consensus 239 mDtDKvKvfGarvrVds~~klaelE~AEkeKmK~KV~kI~~hgiN~FiNRQLiYnyPeqLf~dag------i~aIEHADF 312 (527)
T KOG0363|consen 239 MDTDKVKVFGARVRVDSTAKLAELEKAEKEKMKEKVEKILKHGINVFINRQLIYNYPEQLFADAG------IMAIEHADF 312 (527)
T ss_pred CcccceeeecceEeecchhHHHHHHHHHHHHHHHHHHHHHhcCCcEEeehhHhhcCHHHHHhhcC------cceeecccc
Confidence 32 221 24567899999999999999999999888887643 467654444
Q ss_pred CCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHH
Q 007981 328 GDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSR 403 (582)
Q Consensus 328 ~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~ 403 (582)
+-+|||+.+|| .++++|++++..+||+|+.++ +++++++-|+|+.-
T Consensus 313 -----dGiERLalvtGGeI~STFd~p~~~klG~C~~IeeimiGed~li~FSGv~~------------------------- 362 (527)
T KOG0363|consen 313 -----DGIERLALVTGGEIVSTFDNPELVKLGECDLIEEIMIGEDKLIKFSGVKL------------------------- 362 (527)
T ss_pred -----hhHHHHhhcccceeeeccCCcchhccccchhhHHHhcCccceeeeccccc-------------------------
Confidence 45799999999 999999999999999999987 59999999999852
Q ss_pred HHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHH
Q 007981 404 KLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGA 482 (582)
Q Consensus 404 ~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i 482 (582)
|-.|||++||+|++++||.+|++|||||++...+++. +++||||.||.+++++.+++...++.+ ..++
T Consensus 363 ----------GeActIVlrGat~q~LDEaeRslHDALcVLaqtv~esrvv~GgG~sEm~Ma~av~~~A~~~pGke-a~Ai 431 (527)
T KOG0363|consen 363 ----------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKESRVVLGGGCSEMLMAKAVDKEAQETPGKE-ALAI 431 (527)
T ss_pred ----------ccceEEEEecccHHHHHHHHHHHHHHHHHHHHHhccceeeecCCcHHHHHHHHHHHHHhhCCchh-hHHH
Confidence 4479999999999999999999999999999999998 999999999999999999999888876 5899
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHC
Q 007981 483 DIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLT 558 (582)
Q Consensus 483 ~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~ 558 (582)
++|++||..+|.+||.|+|+|+.+++++|++. ...+|+|..+|++.||.+.||+|.+.+|.+.+.+|.|.|.+|||
T Consensus 432 eAfarAL~qlPtiiaDNaG~dsaelva~Lra~h~~g~~t~Gld~~~G~i~dm~~~Gi~es~~vK~~vv~sasEaae~ilr 511 (527)
T KOG0363|consen 432 EAFARALRQLPTIIADNAGYDSAELVAQLRAEHYNGRTTMGLDVRNGEIGDMRELGIVESLKVKQAVVSSASEAAEMILR 511 (527)
T ss_pred HHHHHHHHhcchhhhccCCCCHHHHHHHHHHHhhcCCcccccccccCchhhHHHhhhHHHHHHHHHHHhhhHHHHHHHHh
Confidence 99999999999999999999999999999995 67899999999999999999999999999999999999999999
Q ss_pred hhHHhcCCCCCCCCC
Q 007981 559 TEAVLADKIKQPKPA 573 (582)
Q Consensus 559 iD~iI~~~~p~~~~~ 573 (582)
+|.||... |+++.+
T Consensus 512 vD~Iik~a-PR~r~~ 525 (527)
T KOG0363|consen 512 VDNIIKAA-PRERER 525 (527)
T ss_pred hhhhhhcC-Cccccc
Confidence 99999998 986543
No 38
>KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-77 Score=593.57 Aligned_cols=380 Identities=20% Similarity=0.289 Sum_probs=362.7
Q ss_pred ecccccchhhHHhhcccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccch
Q 007981 34 LWRNQSRKMVAVVRAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTI 112 (582)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~ 112 (582)
+||++||||++++++..+.+.+|.++.++++-+.+++++++++|+||+|++||.++ .|++++|||| .|++
T Consensus 4 ~~~~~~~~~iiLrDQd~~~Ri~G~ea~Ks~I~agkaVA~~lrtSLGPkGlDK~l~~pdgditvtndg---------d~~I 74 (400)
T KOG0357|consen 4 AFDEFGRPFIILRDQERKDRLFGLDAVKSHIGAAKAVARILRTSLGPKGLDKMLVSPDGDITVTNDG---------VHQI 74 (400)
T ss_pred HhHhhcCceEEeeeccCCchhhHHHHhhhhhHHHHHHHHHHHhhcCccccccccccCCCCceeeecc---------chHH
Confidence 79999999999999999999999999999999999999999999999999999999 9999999999 6787
Q ss_pred hhHHhHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHH
Q 007981 113 ENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKA 192 (582)
Q Consensus 113 ~~~~akLl~~~a~~qd~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~ 192 (582)
++|+..++..||.++|||||.+++|++.+++++.+++.+|+||..|.+||+.+.+.++++|++.+.+++
T Consensus 75 ----akLmv~LS~sqd~eIgdGtTgVvvLa~alleqa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~e------- 143 (400)
T KOG0357|consen 75 ----AKLIVILSKSQDDEIGDGTTGVVVLAGALLEQAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPFE------- 143 (400)
T ss_pred ----HHHHHHhcccchhhhccCCcccEEecccchHhHHhhcccccchhHHHHhhhhHHHhhhhhhhhhccccc-------
Confidence 999999999999999999999999999999999999999999999999999999999999999888776
Q ss_pred HHHHhcCCchhHHHHHHHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc
Q 007981 193 VASISAGNDEFIGNLIADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (582)
Q Consensus 193 va~ts~~~~~~l~~li~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~ 272 (582)
T Consensus 144 -------------------------------------------------------------------------------- 143 (400)
T KOG0357|consen 144 -------------------------------------------------------------------------------- 143 (400)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCHHhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccC
Q 007981 273 ISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAG 351 (582)
Q Consensus 273 i~~~~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~ 351 (582)
+.++++.++++|.+|+||||+|||+|+++|.+|.+ +||||+| ..++|-||++|| +++++|++
T Consensus 144 ------f~emi~~vK~~ga~l~icqwgfddeanhll~~n~l------pavrwVG-----GpEiEliAiaT~grIVprF~e 206 (400)
T KOG0357|consen 144 ------FEEMIQQIKETGANLAICQWGFDDEANHLLLQNNL------PAVRWVG-----GPEIELIAIATGGRIVPRFSE 206 (400)
T ss_pred ------HHHHHHHHHhhCCcEEEEecccCchhhhHHhhcCC------CceeecC-----CcceEEEEeecCCeeeccHhh
Confidence 34468889999999999999999999999999986 8999998 467899999999 99999999
Q ss_pred CCccccceeeEEEE-----ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCH
Q 007981 352 ATSDQLGIARKVTV-----KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTE 426 (582)
Q Consensus 352 l~~~~lG~~~~v~~-----~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~ 426 (582)
+++++||+|+.|+. ++|++++++.|+++ +.+||+|||+|+
T Consensus 207 L~~~kLG~aglVrE~sfgttkdkmlviEqc~ns-----------------------------------kaVTifvRg~Nk 251 (400)
T KOG0357|consen 207 LTAEKLGFAGLVREISFGTTKDKMLVIEQCKNS-----------------------------------KAVTIFVRGGNK 251 (400)
T ss_pred hCHhhccccceEEEEecccccceEEEEEecCCC-----------------------------------ceEEEEEecCcc
Confidence 99999999999985 68999999999875 479999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChH
Q 007981 427 VELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGT 505 (582)
Q Consensus 427 ~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~ 505 (582)
++++|.||++|||||++||.++|. +|||||++|+.||-++.+.++++++.|| |++++|++||++||..||+|||++|+
T Consensus 252 mii~EakrslhdalCvirnlird~rivYgGGaaEiscslav~~ead~~~g~eq-ya~rafa~ale~ipmalaensgl~pi 330 (400)
T KOG0357|consen 252 MIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKIPGIEQ-YAFRAFADALESIPMALAENSGLDPI 330 (400)
T ss_pred eeHHHHHHHhhhhHHHHHHHhhcCeeEecCchHHhhhhhHhhHhhccCCcHHH-HHHHHHHHHHhhcchhhhhccCCCch
Confidence 999999999999999999999998 9999999999999999999999999875 89999999999999999999999999
Q ss_pred HHHHHhhcC-----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCC
Q 007981 506 IVVEKTRTS-----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADK 566 (582)
Q Consensus 506 ~vl~kl~~~-----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~ 566 (582)
+.++++++. ++++|+||......||.+++|+||+..|++++..|+|++.|||+||+|+...
T Consensus 331 ~~ls~~ka~q~~~~~~~lGidcl~~G~nDMk~~~vie~l~~KkqQi~laTQ~vrMiLKiddv~~~~ 396 (400)
T KOG0357|consen 331 ETLSDVKARQVKEMNPALGIDCLHKGTNDMKEQHVIETLIGKKQQISLATQMVRMILKIDDVRKPG 396 (400)
T ss_pred hhhhHhHHHHHHhcCcccCcchhccCchhhhhhccHHHhhhhHHHHHHHHHHHHHhhhccceecCC
Confidence 999999883 7899999999999999999999999999999999999999999999998664
No 39
>KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.9e-71 Score=572.24 Aligned_cols=452 Identities=23% Similarity=0.311 Sum_probs=400.9
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhcCCCc
Q 007981 57 KESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLAGDGT 135 (582)
Q Consensus 57 ~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e~GDGT 135 (582)
+++...|++||+++++++||+|||+||+|||+| .|++.+|||.+||+++++++||. ||||+++++.|+++.||||
T Consensus 25 e~~v~~ni~a~~ela~~~rs~yGpng~nK~vvnh~~k~~~TndaatIlrelev~HPa----akllv~a~~~q~~~iGDgt 100 (537)
T KOG0362|consen 25 EEAVIRNIAAVRELANVIRSAYGPNGRNKMVVNHLGKTFVTNDAATILRELEVEHPA----AKLLVEATQMQEEEIGDGT 100 (537)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCCcceeeecccceEEEcCChHHHHHHhhccCcH----HHHHHHHHHHHHHhhCCCc
Confidence 678899999999999999999999999999999 99999999999999999999994 9999999999999999999
Q ss_pred chHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCc----ccCCHHHHHHHHHHh--cCCchhHHHHHH
Q 007981 136 TTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSF----PVTGRDDIKAVASIS--AGNDEFIGNLIA 209 (582)
Q Consensus 136 TtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~----~v~~~~~L~~va~ts--~~~~~~l~~li~ 209 (582)
+++|+|+++||++|.++|..|++|.+|++||+.|.+.+++.|+++.. +++|.+.....+..+ ..++++++++++
T Consensus 101 nfvvvla~~LLe~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~~~d~~d~~~~~rs~i~skq~~~ed~l~~lVa 180 (537)
T KOG0362|consen 101 NFVVVLAGALLEQAEELIRMGLTPAEISEGYETATKEALEILPELVVQSIGDLEDKEWALRSVIMSKQYGNEDFLTKLVA 180 (537)
T ss_pred eEeehhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHhcccccChHHHHHHHHHHhhcchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988742 334554333333233 335799999999
Q ss_pred HHHHHhccCC-----cEEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc----------
Q 007981 210 DAIIKIGADG-----VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK---------- 272 (582)
Q Consensus 210 ~Av~~v~~~g-----~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~---------- 272 (582)
+|+..+.+.+ .|.+ ..|+++++| .++.||+|.+.- ++...+-+++||.++.||
T Consensus 181 ~ac~si~p~~~FnvdnIrVcKi~Gg~l~~S-~Vv~GmVfkr~~---------eG~v~~ak~arvAvf~cP~d~~~TEtkg 250 (537)
T KOG0362|consen 181 KACVSILPLMSFNVDNIRVCKILGGGLEDS-CVVCGMVFKRDP---------EGEVKSAKDARVAVFACPFDIAQTETKG 250 (537)
T ss_pred HHHHhhcccccccccceEEEEEecCCcccc-eeeEEEEecccc---------CCcccccccceeEEEecCCCcccccCcc
Confidence 9999998873 2333 689999999 899999999873 334467778999999998
Q ss_pred ---CCCHHhHHH-----------HHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHH
Q 007981 273 ---ISTVKEIVP-----------LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDI 338 (582)
Q Consensus 273 ---i~~~~el~~-----------~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~i 338 (582)
|++++++.+ .++.+...|+++|++...+++.+|+++ |+ +++++++.++ +.+|.+|
T Consensus 251 TvLi~~A~el~~FSKgEe~lle~~vk~Ia~~gvkViV~~g~V~em~Lhfl--nk----y~ImVlqi~S-----k~eLrrl 319 (537)
T KOG0362|consen 251 TVLLKNAKELLNFSKGEEALLEEQVKAIADAGVKVIVSGGKVDEMTLHFL--NK----YKIMVLQINS-----KFDLRRL 319 (537)
T ss_pred eeeecCcHhhhhhccccHHHHHHHHHHHHhcCCeEEEecCccchhhhhhh--cc----ccEEEEEecc-----HhhHHHH
Confidence 667776643 466788899999999999999999876 33 5679999887 7899999
Q ss_pred HHHhC-CccccccCCCccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcC
Q 007981 339 ALMTG-ELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSG 414 (582)
Q Consensus 339 a~~tG-~i~~~l~~l~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~ 414 (582)
++..| .+.+++..+.+..+|.|.+|. +++..+++|..... .+
T Consensus 320 crtvGA~~l~rl~~P~~~~lG~~d~V~~~EiG~~~v~vF~~e~~----------------------------------~~ 365 (537)
T KOG0362|consen 320 CRTVGATALPRLFPPAPEELGYCDSVSTQEIGDTLVVVFRWEST----------------------------------GT 365 (537)
T ss_pred HHHcCCccchhccCCCCccccccceeeeeecCCceEEEEeeccC----------------------------------CC
Confidence 99999 888999999999999999997 47788888876421 13
Q ss_pred CeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHH
Q 007981 415 GVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPA 493 (582)
Q Consensus 415 ~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip 493 (582)
.++|+++||+|+..+|+.||.+.|++++.+...+++ ++||+|++|+++++.|.++.++.++.+| ++++.|++||+.+|
T Consensus 366 ~~~TvVLRgst~s~LDd~ERAVddgV~tyK~l~~d~rLlpGagatEieLak~i~~~g~~~~Gl~q-~Aik~fa~Ale~~P 444 (537)
T KOG0362|consen 366 RVATVVLRGATQSILDDAERAVDDGVNTYKALCSDSRLLPGAGATEIELAKQISSRGATLPGLKQ-LAIKKFAEALEVLP 444 (537)
T ss_pred ceeEEEEcccchhhHHHHHHHHHHhHHHhhhhccCCccccCCchhHHHHHHHHHHhcccCCCcch-hHHHHHHHHhcccc
Confidence 589999999999999999999999999999999998 9999999999999999999999999985 89999999999999
Q ss_pred HHHHHhcCCChHHHHHHhhcC---CCcceeecCCC-cccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCC
Q 007981 494 ISIATNAGVDGTIVVEKTRTS---DWRFGYNAMTG-RYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQ 569 (582)
Q Consensus 494 ~~La~NaG~d~~~vl~kl~~~---~~~~Gid~~~g-~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~ 569 (582)
++|++|+|++..+++++|... ...+|+|+..+ ...|+.+.||||-+..|.++++.|+++|.++|++|+||+.+ |.
T Consensus 445 ktlaEnagl~~~evia~ly~~h~~g~~~g~di~~e~~~~d~~~~~i~D~~~~K~~a~k~at~aa~tvl~vDqiimak-~a 523 (537)
T KOG0362|consen 445 KTLAENAGLAVTEVIAKLYAVHQGGKNLGMDIEAEGGTIDVREEGIWDTLAVKAQAIKLATEAALTVLTVDQIIMAK-KA 523 (537)
T ss_pred HhHHHhcCCcHHHHHHHHHHhhcCCCcceeeeeccccccChhhhchHHHHHHHHHHHHHHHhhhheeeehhheeEec-cc
Confidence 999999999999999999884 45689998776 58999999999999999999999999999999999999998 65
No 40
>KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-71 Score=571.94 Aligned_cols=460 Identities=24% Similarity=0.308 Sum_probs=410.5
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007981 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (582)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e 130 (582)
+...|...|.+|..|+..++++++|||||-|+|||+++ .|++++||||+|||+.+.++||. +|+|+++++.||++
T Consensus 13 e~~sg~~vr~qnv~a~~~i~nivkss~GPvGldKmlvdd~Gdvt~TndgAtiL~~l~V~HPa----~KiLvelaq~qd~e 88 (545)
T KOG0360|consen 13 ERLSGERVRTQNVMAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILSLLEVEHPA----AKVLVELAQLQDEE 88 (545)
T ss_pred CcccchhhhhhhhHHHHHHHHHHHhccCccchhhhccccccceEEeccHHHHHHhhhhcchH----HHHHHHHHHhcccc
Confidence 46678999999999999999999999999999999999 99999999999999999999995 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHc-cCcccC--CHHHHHHHHHHhcCC------c
Q 007981 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQ-KSFPVT--GRDDIKAVASISAGN------D 201 (582)
Q Consensus 131 ~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~~~L~~va~ts~~~------~ 201 (582)
+|||||+||+++++|++++.+|+..++||..|+.||+.|+..+++++++ ++.|++ ..+.|.++++|++++ .
T Consensus 89 vgDgttsvviia~eLl~~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~vd~lg~~~Lin~~ktsmsSK~i~~ds 168 (545)
T KOG0360|consen 89 VGDGTTSVVIIAAELLKNADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPVDSLGTQILINLAKTSMSSKIIGMDS 168 (545)
T ss_pred ccCCceEEEEEEHHhhhhHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeehhhcchHHHHHHHHhhhcceecccch
Confidence 9999999999999999999999999999999999999999999999965 678887 578999999999865 4
Q ss_pred hhHHHHHHHHHHHhcc---CCc---------EEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEe
Q 007981 202 EFIGNLIADAIIKIGA---DGV---------ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLIT 269 (582)
Q Consensus 202 ~~l~~li~~Av~~v~~---~g~---------I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~ 269 (582)
++|++++++|+..+.- +|. |-.-.|.+..|| .+++|+.+.....+. .|+..++|+||+++
T Consensus 169 ~~f~~~Vvda~l~v~~~~~~ge~~ypi~~vnILkahG~s~~eS-~l~~GyaLnc~~asq-------~m~~~i~~~Kiacl 240 (545)
T KOG0360|consen 169 DFFTEMVVDALLAVKILDINGEPHYPINSVNILKAHGKSQIES-MLLPGYALNCSVASQ-------MMPLRIKNAKIACL 240 (545)
T ss_pred HHHHHHHHHHHHHHhhcccCCceeccccceeEEecCCccchhh-eeecceeeeccHhhh-------ccccccccceeeeE
Confidence 8999999999988732 231 222489999999 799999999876664 38889999999999
Q ss_pred cccC-------------CCHHhHH-----------HHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCC
Q 007981 270 DQKI-------------STVKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (582)
Q Consensus 270 ~~~i-------------~~~~el~-----------~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~ 325 (582)
|+.+ .+++++. +.++++...|+|+|+++++|||..+.+|++.. ++||
T Consensus 241 d~~Lqk~km~lGv~vvv~dp~kle~ir~~e~~itkeRi~kIl~~ganvVLtt~gIddmc~K~~veag------amAV--- 311 (545)
T KOG0360|consen 241 DFTLQKTKMKLGVQVVVDDPEKLEQIRQREQDITKERIKKILATGANVVLTTGGIDDMCLKYFVEAG------AMAV--- 311 (545)
T ss_pred ecccccccccccceEEEcChHHHHHHHHHHhHhHHHHHHHHHhcCCcEEEEcCCccHHHHHHHHHcc------hhhh---
Confidence 9863 4454332 34678899999999999999999999999875 3666
Q ss_pred CcCCCcHHHHHHHHHHhC-Ccccccc------CCCccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHHHhh
Q 007981 326 GFGDGKKALLQDIALMTG-ELGLTLA------GATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAA 395 (582)
Q Consensus 326 ~~~~~~~~~Le~ia~~tG-~i~~~l~------~l~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~ 395 (582)
++.++++|++|+++|| +++.++. .+.++.+|+|++|. +++|.++++.+...
T Consensus 312 --rR~~k~dlk~iakatGat~~sSla~l~geetf~~~~lG~a~evvqeri~dde~ilikg~ka----------------- 372 (545)
T KOG0360|consen 312 --RRCKKEDLKRIAKATGATLLSSLANLEGEETFEPASLGSADEVVQERIGDDELILIKGTKA----------------- 372 (545)
T ss_pred --HHHHHHHHHHHHHhhCCeeeehhhccccccccChhhccchhHHHHHhcccceeEEeccCcc-----------------
Confidence 4677999999999999 8887776 45678899999995 58888988887532
Q ss_pred hchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCC
Q 007981 396 TDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSME 474 (582)
Q Consensus 396 ~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~ 474 (582)
..|+|++||+|+..+||++|++|||+|++|..++++ +||||||+|..++-+|++|+.+..
T Consensus 373 -------------------~~aSiILrgaNd~~~DEmers~hdaL~VlkrtLes~~vvpGGG~vE~aLs~yle~~a~s~~ 433 (545)
T KOG0360|consen 373 -------------------TSASIILRGANDFMLDEMERSLHDALCVLKRTLESKSVVPGGGAVETALSIYLENFATSVG 433 (545)
T ss_pred -------------------ceeeEEEecCCcccHhhhccchhhHHHHHHHHhccCccccCccHHHHHHHHHHHhhcccCc
Confidence 268999999999999999999999999999999999 999999999999999999998887
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC------------CCcceeecCCCcccccccCcccccHHHH
Q 007981 475 DPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS------------DWRFGYNAMTGRYEDLLSAGVADPCRVA 542 (582)
Q Consensus 475 ~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~------------~~~~Gid~~~g~i~d~~~~gI~Dp~~vk 542 (582)
++|| .++.-|+.||..||++|+.|++.|+.+.+++++.. .+++|.|+.+|++.|.++.|+++|..+|
T Consensus 434 srE~-laiaefa~all~ipktla~naa~Dstelvt~lra~Hs~~q~~p~~~~~k~~GldL~ng~~~dn~~~g~~ep~~~k 512 (545)
T KOG0360|consen 434 SREQ-LAIAEFAAALLSIPKTLAVNAAKDSTELVTKLRAYHSVSQDNPWRLLLKQYGLDLINGKIRDNKSAGSFEPPIVK 512 (545)
T ss_pred cHHH-HHHHHHHHHHhcchHHHhhhhccccccccccccCCchhhccCCccccchhhCccccccEeecceeeeeeccceee
Confidence 7765 68888999999999999999999999999999884 3489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHChhHHhcCCCCCCCC
Q 007981 543 RCALQNAVSIAAVVLTTEAVLADKIKQPKP 572 (582)
Q Consensus 543 ~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~ 572 (582)
...|+.|++.+..+||+|++|.-. |+.+.
T Consensus 513 vksLk~ateaaitiLriD~li~l~-~~~~~ 541 (545)
T KOG0360|consen 513 VKSLKFATEAAITILRIDDLIKLL-PELQV 541 (545)
T ss_pred hhhhHHHHHhhhhhcchhhhhhcC-ccccc
Confidence 999999999999999999999887 76543
No 41
>KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-70 Score=559.64 Aligned_cols=458 Identities=22% Similarity=0.297 Sum_probs=414.0
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
..++..|..++..|+++.++++|.++++|||+.|.||+.+ .|.+..||||..|+++|++.||. |+-+.+++.+||
T Consensus 11 ~~~re~g~kvq~~ni~aak~iadvirtclgp~am~kmlld~~g~i~~tndg~ailrei~Vahpa----aksmiel~rtqd 86 (527)
T KOG0364|consen 11 NTKRESGRKVQLGNIQAAKAIADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHPA----AKSMIELSRTQD 86 (527)
T ss_pred ccCcCccccccccchhhHHHHHHHHHHhcChHHHHHHhhccCCceEEecCcHHHHHHHhhcCcc----hhhHhhhhhccc
Confidence 4556678888999999999999999999999999999999 99999999999999999999995 999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcC------C
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAG------N 200 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~------~ 200 (582)
+|+|||||||++||+|+|.++..++++|+||..|++.|.+|++.++..+++++.|++ +...++++..++.. +
T Consensus 87 eevgdgttsvi~lagE~L~~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~d~~~~~km~~vi~~~v~tk~~~~~ 166 (527)
T KOG0364|consen 87 EEVGDGTTSVIILAGEMLNVAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPVDVKDQAKMLRVINSSVGTKFNSRW 166 (527)
T ss_pred ccccCCceeeeeehHHHhhhcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccCCcccHHHHHhhhhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999999888887 56678878777654 3
Q ss_pred chhHHHHHHHHHHHhccC-Cc-E------E--EeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEec
Q 007981 201 DEFIGNLIADAIIKIGAD-GV-I------L--IESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (582)
Q Consensus 201 ~~~l~~li~~Av~~v~~~-g~-I------~--i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~ 270 (582)
.+.++++..+|+++|+.+ |. | + +.+|+.+++| ++++|+.+.+...||. |+..++||+|+++|
T Consensus 167 ~~~~~~lal~avk~V~~~~g~e~dik~y~kveKvpgg~l~~s-~vl~Gv~~nkdv~Hpk-------mrr~IenprivLlD 238 (527)
T KOG0364|consen 167 SDLICNLALDAVKTVGVENGREIDIKRYAKVEKVPGGLLEDS-CVLKGVMINKDVTHPK-------MRRAIENPRIVLLD 238 (527)
T ss_pred cchhhhHHHHHHHHhhhccCceechhhhccccccCccccccc-ceecceeeccccCcHH-------HHHHhhcCcEEEec
Confidence 578899999999999875 32 2 2 2589999999 9999999999999985 78899999999999
Q ss_pred ccCCCH------------------------HhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCC
Q 007981 271 QKISTV------------------------KEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (582)
Q Consensus 271 ~~i~~~------------------------~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~ 326 (582)
|++++- +++..+++.+....++||++.++++|.|.++|.++++ . +
T Consensus 239 ~~LeykkGeSqtnve~~~eed~~r~Lqieee~v~~mc~~Ii~v~pDlVitekG~sdla~hyl~k~~i------T-----~ 307 (527)
T KOG0364|consen 239 CPLEYKKGESQTNVEIVKEEDFTRILQIEEEQVQAMCEVIIAVKPDLVITEKGVSDLAQHYLLKANI------T-----A 307 (527)
T ss_pred CCccCCCCccccceeeeechhHHHHHHhhHHHHHHHHHHHHeecccEEEeccchhHHHHHHHHhcCc------h-----h
Confidence 996431 1234567788889999999999999999999998864 3 3
Q ss_pred cCCCcHHHHHHHHHHhC-CccccccCCCccccce-eeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHH
Q 007981 327 FGDGKKALLQDIALMTG-ELGLTLAGATSDQLGI-ARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYL 401 (582)
Q Consensus 327 ~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~-~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e 401 (582)
++++++.+-.+++++|| .++.+.+++...+.|+ |+.+++ +++.|+||..|.+|
T Consensus 308 ~rr~rKtDn~ria~acga~iv~rpedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck~p---------------------- 365 (527)
T KOG0364|consen 308 IRRLRKTDNNRIARACGARIVNRPEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCKEP---------------------- 365 (527)
T ss_pred hhhhhccccchhhhhcCceeccChhhCchhccCcccceeeeeccCchhhhhhhhcCCC----------------------
Confidence 47889999999999999 9999999999999995 667764 78899999999877
Q ss_pred HHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHH
Q 007981 402 SRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQI 480 (582)
Q Consensus 402 ~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~ 480 (582)
+.|||++||+++.+++|.+|.+.||+.+.|+.+-++ ++|||||+||..|+.|...+....+.+ +.
T Consensus 366 -------------kaCtillrg~skdil~e~ernlqda~~varn~ii~PklvPGGGAtEMAvs~~L~qksa~~~GVe-kw 431 (527)
T KOG0364|consen 366 -------------KACTILLRGPSKDILNEVERNLQDAMGVARNVIINPKLVPGGGATEMAVSHELRQKSALMTGVE-KW 431 (527)
T ss_pred -------------cceEEEeccCchhHHHHHHHHhhhHHHHHHHhccCCcccCCccHHHHHHHHHHHHHHhhccchh-cc
Confidence 479999999999999999999999999999999998 999999999999999998776666765 47
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHH
Q 007981 481 GADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVV 556 (582)
Q Consensus 481 ~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~i 556 (582)
-+++++.||+.+|++|++|+|.+++..++.++.. ...+|+|.++|.++||.+.++|+|..+|.+..++|++.++++
T Consensus 432 PY~Ava~AlEviPrtliqncGan~Ir~lTalr~kh~~G~~~~gi~g~tg~iVDm~~~~iwep~~vK~Q~~ktavesa~~L 511 (527)
T KOG0364|consen 432 PYGAVAGALEVIPRTLIQNCGANPIRALTALRAKHKEGQRVWGIDGETGVIVDMVELGIWEPEAVKLQTGKTAVESACLL 511 (527)
T ss_pred chhhhhcCceeccHHHHhhcCccHHHHHHHHHHHhcCcceeecccCceeeEeeeeeccccchhhhhhhhhhHHHHHHHHH
Confidence 8899999999999999999999999999888774 467899999999999999999999999999999999999999
Q ss_pred HChhHHhcCC
Q 007981 557 LTTEAVLADK 566 (582)
Q Consensus 557 L~iD~iI~~~ 566 (582)
||+|++++.+
T Consensus 512 LRIddIvsg~ 521 (527)
T KOG0364|consen 512 LRIDDIVSGK 521 (527)
T ss_pred Hhhhceeeee
Confidence 9999999887
No 42
>KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-66 Score=526.69 Aligned_cols=449 Identities=22% Similarity=0.321 Sum_probs=399.6
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhcCCCcc
Q 007981 58 ESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLAGDGTT 136 (582)
Q Consensus 58 ~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e~GDGTT 136 (582)
.+...|++++..+.+.+++.+||+|..||+++ .|++++|+||.+.+++|+++||- |-++..++.+||+..|||||
T Consensus 17 aal~iNis~AigLqsV~~snlgPkgt~KmlvsgagdIklakdgnvLl~emQiqhPT----a~lIakaatAqdd~tGDGtt 92 (520)
T KOG0359|consen 17 AALALNISAAIGLQSVLVLNLGPKGTEKMLVSGAGDIKLAKDGNVLLKEMQIQHPT----ASLIAKVATAQDDITGDGTT 92 (520)
T ss_pred cceeeccccccceeeeehhccCchhHHHhccCCccceEEEecchhhHHHHhhcCch----HHHHHHHHHHhhcccCCCcc
Confidence 46667889999999999999999999999999 99999999999999999999996 99999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCc------hhHHHHHHH
Q 007981 137 TAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGND------EFIGNLIAD 210 (582)
Q Consensus 137 tvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~------~~l~~li~~ 210 (582)
|+|+|.++|+++|..+++.|+||..|.+||+.|.+.++++|++.+.+++ ++.|..+|+++++++ +.+++++++
T Consensus 93 S~VlligEllkqa~~~i~eGlhprii~~gfe~a~~~~l~~L~k~~~~~~-~~~L~~va~tsl~Tkv~~~la~~lt~~vv~ 171 (520)
T KOG0359|consen 93 SVVLLIGELLKQADRYISEGLHPRIITEGFEAAKNKALEFLEKVSREVD-RETLKDVARTSLRTKVHAELADVLTPIVVD 171 (520)
T ss_pred eEEEeeHHHHHHHHHHhhcCCCcchhhhHHHHHHHHHHhhhhccccchh-HHHHHHHHHHhhcCcccHHHHhHhHHHHHh
Confidence 9999999999999999999999999999999999999999998787775 789999999999873 677888899
Q ss_pred HHHHhcc-CCcEEE-------eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHH-----
Q 007981 211 AIIKIGA-DGVILI-------ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVK----- 277 (582)
Q Consensus 211 Av~~v~~-~g~I~i-------~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~----- 277 (582)
|+..+.+ ++.|.+ -...+..|+ .+++|+++|||-+||. ||+.++|++||+++.++++++
T Consensus 172 aVl~i~~~~~~idl~mveim~mq~~s~~dT-~~v~glvLdhg~rHpd-------mp~~~e~a~iL~~NvSLEYEK~Eins 243 (520)
T KOG0359|consen 172 SVLCIRRQEEPIDLFMVEIMEMQHKSLHDT-SLVQGLVLDHGARHPD-------MPRRVEDAYILICNVSLEYEKPEINS 243 (520)
T ss_pred hheeeccCCCCcchhHHHhhhhccCchhhh-HHhhhhhccCCCCCcc-------cccchhceEEEEeecccccccccccc
Confidence 9888763 332221 245677777 7999999999999996 899999999999998876543
Q ss_pred --------h---H--------HHHHHHHhcCC---C-CEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHH
Q 007981 278 --------E---I--------VPLLEKTTQLS---V-PLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKAL 334 (582)
Q Consensus 278 --------e---l--------~~~le~i~~~~---~-~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~ 334 (582)
| + .+.+.++.+.+ + -+||.|++||+..+..|..+.+ .|+ ++-++..
T Consensus 244 gffYsta~ere~L~~~eR~Fi~~r~~kiielk~~vc~fvvinqkGidp~sld~~a~~gI------laL-----RRAKRRN 312 (520)
T KOG0359|consen 244 GFFYSTAEEREVLVLAERKFIDQRVRKIIELKRKVCEFVVINQKGIDPTSLDSLAKSGI------LAL-----RRAKRRN 312 (520)
T ss_pred chhccchhHHHHHHHHHHHHHHHHHHHHHHHhhhcceEEEecccCCCCCcchhhhhcch------HHH-----HHHhhhh
Confidence 1 1 12233444333 2 4578889999999999987643 454 5677899
Q ss_pred HHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHH
Q 007981 335 LQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIA 410 (582)
Q Consensus 335 Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~ 410 (582)
||||..+|| ..+.+++|++++.||.|+.|++ ++++|+|+++|.+|
T Consensus 313 mERL~lacGG~a~nsvddLtp~~LG~aglVye~tlGEEkfTFIE~~~~p------------------------------- 361 (520)
T KOG0359|consen 313 MERLVLACGGEAVNSVDDLTPDYLGYAGLVYEYTLGEEKFTFIEKCNNP------------------------------- 361 (520)
T ss_pred HHHHHHhhccceecccccCChhhccccceeEEeeccceeeEeeecCCCC-------------------------------
Confidence 999999999 8899999999999999999985 89999999999887
Q ss_pred HhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHH
Q 007981 411 KLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKAL 489 (582)
Q Consensus 411 ~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL 489 (582)
+.|||+|+|||++.+.+.|+.++|++++++++++++ ++||+|++|+.++.+|+...++.++.. ++|+++|++||
T Consensus 362 ----~S~TiLikgpnkht~tQikdairdglrav~ntl~d~~~i~Gaga~~va~~~~lr~~k~~vkgra-~~g~~afa~al 436 (520)
T KOG0359|consen 362 ----SSVTILIKGPNKHTITQIKDAIRDGLRAVKNTLEDKCGIPGAGAFEVALGRHLRESKKSVKGRA-YLGVKAFANAL 436 (520)
T ss_pred ----cceEEEEeCCccchHHHHHHHHhhHHHHHHHHhhhcccccCchHHHHHHHHHHHHhhhccCchh-hhhHHHHHhhh
Confidence 479999999999999999999999999999999998 999999999999999998888888876 58999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHHhhcC--CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCC
Q 007981 490 IVPAISIATNAGVDGTIVVEKTRTS--DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADK 566 (582)
Q Consensus 490 ~~ip~~La~NaG~d~~~vl~kl~~~--~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~ 566 (582)
..+|++|++|+|+|+.+++.+|... ....|+|+.+|+..+....||||.+.||++.|+.++-+|+.||-+|+|+...
T Consensus 437 l~ipk~La~nsg~D~qe~l~~l~~e~~~~~~g~dl~~g~~~~~~~~gi~Dny~v~~~~l~s~~via~nlLlvDEi~rAG 515 (520)
T KOG0359|consen 437 LVIPKTLAKNSGLDEQETLVSLKKEHEVTLRGLDLFRGEECDPSRKGIYDNYSVKKQLLRSEAVIATNLLLVDEIIRAG 515 (520)
T ss_pred hhhhHHHHHhcCCchHHHHHHHHHhhhhhhcccccccCCccchhhccccchHHHHHHHhhhhHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999998775 3456999999999999999999999999999999999999999999999765
No 43
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=99.96 E-value=5e-28 Score=238.30 Aligned_cols=191 Identities=33% Similarity=0.427 Sum_probs=169.4
Q ss_pred HHHHHHHHHhcC-----CchhHHHHHHHHHHHhcc------CCcEEE--eCCCCcccceeeeeceEEecccCCccccccc
Q 007981 188 DDIKAVASISAG-----NDEFIGNLIADAIIKIGA------DGVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQ 254 (582)
Q Consensus 188 ~~L~~va~ts~~-----~~~~l~~li~~Av~~v~~------~g~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~ 254 (582)
+.|.++|+|+++ +++.+++++++|+..+++ .+.|++ .+|+++.|| ++++|++|+++|.||+
T Consensus 2 ~~l~~ia~ts~~sk~~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds-~li~Gv~~~~~~~~~~----- 75 (209)
T cd03333 2 ELLLQVATTSLNSKLSSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDS-ELVVGVVFDKGYASPY----- 75 (209)
T ss_pred hHHHHHHHHHhccchhhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhc-eeEeeEEEeccccCCC-----
Confidence 468999999998 789999999999999987 345555 589999999 8999999999999987
Q ss_pred cccceeecceeEEEecccCCCHHhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHH
Q 007981 255 EKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKAL 334 (582)
Q Consensus 255 ~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~ 334 (582)
|+++++||+|+++++++++ +|+++++|++.++++|..++ |+||++ +++.+
T Consensus 76 --m~~~~~n~~Ill~~~~le~-----------------vii~~~~I~~~al~~l~~~~------I~~v~~-----~~~~~ 125 (209)
T cd03333 76 --MPKRLENAKILLLDCPLEY-----------------VVIAEKGIDDLALHYLAKAG------IMAVRR-----VKKED 125 (209)
T ss_pred --CCeEcCCCcEEEEeCCeeE-----------------EEEecCcccHHHHHHHHHCC------CEEEEe-----CCHHH
Confidence 6789999999999999887 89999999999999998854 478765 56899
Q ss_pred HHHHHHHhC-CccccccCCCccccceeeEEEEe---cccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHH
Q 007981 335 LQDIALMTG-ELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIA 410 (582)
Q Consensus 335 Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~~---~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~ 410 (582)
|+|||++|| +++.++++++++.||+|+.+++. ++.+++|.+|..
T Consensus 126 l~~ia~~tga~ii~~~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~-------------------------------- 173 (209)
T cd03333 126 LERIARATGATIVSSLEDLTPEDLGTAELVEETKIGEEKLTFIEGCKG-------------------------------- 173 (209)
T ss_pred HHHHHHHHCCEEecccccCChhhceeeeEEEEEEECCeEEEEEEcCCC--------------------------------
Confidence 999999999 88889999999999999999873 456889988754
Q ss_pred HhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhc
Q 007981 411 KLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDE 449 (582)
Q Consensus 411 ~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~ 449 (582)
+..|||+|||+|+.+++|.||+++||++++++++++
T Consensus 174 ---~~~~tIllrG~t~~~l~e~kr~l~dal~~~~~~~~~ 209 (209)
T cd03333 174 ---GKAATILLRGATEVELDEVKRSLHDALCAVRAAVEE 209 (209)
T ss_pred ---CCEEEEEEECCCHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 257999999999999999999999999999999875
No 44
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=99.94 E-value=4e-26 Score=231.88 Aligned_cols=196 Identities=17% Similarity=0.158 Sum_probs=166.9
Q ss_pred chhHHHHHHHHHHHhccC----------CcEEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEE
Q 007981 201 DEFIGNLIADAIIKIGAD----------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (582)
Q Consensus 201 ~~~l~~li~~Av~~v~~~----------g~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll 268 (582)
.+.|++++++|+..+.++ ..|++ .+|+++.|| ++++|+++++...|+. ||++++||||++
T Consensus 20 ~~~ls~l~v~Av~~v~~~~~~~~~~di~~~I~I~ki~Ggs~~dS-~li~Gvvi~k~~~~~~-------m~~~i~n~kIll 91 (261)
T cd03334 20 LDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIPGGSPSDS-EVVDGVVFTKNVAHKR-------MPSKIKNPRILL 91 (261)
T ss_pred HHHHHHHHHHHHHHhhcccccCCccChhHceEEEEecCCCHHHc-EEEeeEEEeCCCCCcc-------CCcccCCCcEEE
Confidence 578999999999998532 12444 589999999 9999999999988863 889999999999
Q ss_pred ecccCCCHH-----------------hHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCc
Q 007981 269 TDQKISTVK-----------------EIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGK 331 (582)
Q Consensus 269 ~~~~i~~~~-----------------el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~ 331 (582)
++++++..+ .+..+++++.+.|+++|+|+++|++.|+++|.+++ |++|+ +++
T Consensus 92 l~~~Le~~~~~~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nvIl~~k~I~~~a~~~l~k~g------I~~v~-----~v~ 160 (261)
T cd03334 92 LQGPLEYQRVENKLLSLDPVILQEKEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEAG------ITLVL-----NVK 160 (261)
T ss_pred EeeeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCccCHHHHHHHHHCC------CEEEE-----ecC
Confidence 999975421 13457889999999999999999999999998875 36776 445
Q ss_pred HHHHHHHHHHhC-Ccccc-ccCCCccccceeeEEEE---ec-----ccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHH
Q 007981 332 KALLQDIALMTG-ELGLT-LAGATSDQLGIARKVTV---KS-----NSTTIVADPYTKAEIQARIMQIKKDLAATDNAYL 401 (582)
Q Consensus 332 ~~~Le~ia~~tG-~i~~~-l~~l~~~~lG~~~~v~~---~~-----~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e 401 (582)
+.+|++||++|| .++++ .++++++.||+|+.|++ ++ +++++|++|..+
T Consensus 161 ~~dl~rIa~~tGa~ii~~i~~~~~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~~---------------------- 218 (261)
T cd03334 161 PSVLERISRCTGADIISSMDDLLTSPKLGTCESFRVRTYVEEHGRSKTLMFFEGCPKE---------------------- 218 (261)
T ss_pred HHHHHHHHHHhCCEEecChhhhcCcccCcCcceEEEEEecCcCCCceeEEEEecCCCC----------------------
Confidence 899999999999 88888 45889999999999986 33 589999998643
Q ss_pred HHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC
Q 007981 402 SRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG 450 (582)
Q Consensus 402 ~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g 450 (582)
..+||+|||+|+..++|.||+++||+++++++..++
T Consensus 219 -------------~~~TIlLRG~t~~~lde~eR~i~Dal~v~~~~~le~ 254 (261)
T cd03334 219 -------------LGCTILLRGGDLEELKKVKRVVEFMVFAAYHLKLET 254 (261)
T ss_pred -------------ceeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 479999999999999999999999999999998875
No 45
>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]
Probab=99.20 E-value=9.8e-11 Score=136.67 Aligned_cols=205 Identities=18% Similarity=0.230 Sum_probs=161.9
Q ss_pred chhHHHHHHHHHHHhccC----------CcE--EEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEE
Q 007981 201 DEFIGNLIADAIIKIGAD----------GVI--LIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (582)
Q Consensus 201 ~~~l~~li~~Av~~v~~~----------g~I--~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll 268 (582)
.+.+..++.+|...+.++ +.+ +.+.||+..|+ +++.|+++.+...| +.|..++++|+|++
T Consensus 334 ~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~~dS-~vi~Gvv~sKn~~~-------k~M~~~~e~prill 405 (1598)
T KOG0230|consen 334 LDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSRVDS-EVIKGVVCSKNVAH-------KRMATKYENPRILL 405 (1598)
T ss_pred HHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCcccc-eeeeEEEeecchhh-------hhhhhhccCCceEE
Confidence 366778888888888764 233 44688899998 99999999998777 45888999999999
Q ss_pred ecccCCCH---------Hh--------HHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCc
Q 007981 269 TDQKISTV---------KE--------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGK 331 (582)
Q Consensus 269 ~~~~i~~~---------~e--------l~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~ 331 (582)
+.+++.+. +. +...+.++...+++++++.++|++.|.++|... |+.-+ -+++
T Consensus 406 l~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~vllVeksVS~~aqe~L~~k---~I~lv--------lnvK 474 (1598)
T KOG0230|consen 406 LGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPDVLLVEKSVSRIAQELLLDK---GISLV--------LNVK 474 (1598)
T ss_pred EecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCCeEEEechHHHHHHHHhhcc---CeEEE--------Eecc
Confidence 99875432 22 234567788889999999999999999998764 33222 2678
Q ss_pred HHHHHHHHHHhC-CccccccCCCccccceeeEEEEe--------cccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHH
Q 007981 332 KALLQDIALMTG-ELGLTLAGATSDQLGIARKVTVK--------SNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLS 402 (582)
Q Consensus 332 ~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~~--------~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~ 402 (582)
+..|+||+++|| .|+++++.++...||.|..+++. ...++||++|..+.
T Consensus 475 ~s~leRIsR~tga~I~~siDslt~~klg~C~~F~v~~~~e~hk~sKTlmffegc~~~l---------------------- 532 (1598)
T KOG0230|consen 475 RSLLERISRCTGADIVPSVDSLTSQKLGYCELFRVENYVEEHKPSKTLMFFEGCPKPL---------------------- 532 (1598)
T ss_pred HHHHHHHHHHhcCceecchhhhhccccCCCccHhhhhhhhcccchhhhHHhhcCCCCC----------------------
Confidence 899999999999 99999999999999999999852 23567888887542
Q ss_pred HHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHH-hhcCccccccHHH
Q 007981 403 RKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAA-MDEGIVPGGGATY 459 (582)
Q Consensus 403 ~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~a-l~~gvvpGGGa~e 459 (582)
-|||++||.+..++.+.|+-+.-++.++-+. ++.-++.--|+..
T Consensus 533 -------------G~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~asi 577 (1598)
T KOG0230|consen 533 -------------GCTILLRGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGASI 577 (1598)
T ss_pred -------------CceEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCcc
Confidence 4899999999999999999999999887655 4444666655543
No 46
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=96.85 E-value=0.0015 Score=72.99 Aligned_cols=87 Identities=17% Similarity=0.094 Sum_probs=71.8
Q ss_pred HHHHHHHhcCCCC-EEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHH-HHHHHHhC-CccccccCCCccc
Q 007981 280 VPLLEKTTQLSVP-LLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALL-QDIALMTG-ELGLTLAGATSDQ 356 (582)
Q Consensus 280 ~~~le~i~~~~~~-lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~L-e~ia~~tG-~i~~~l~~l~~~~ 356 (582)
..+++.+.+.+.+ +++++++|+|.+.++|..+. |.+++ ++.++++ ++|+.++| +++..++++++..
T Consensus 260 ~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~------Ilt~~-----~v~~~dl~~~l~~~~ga~~v~~~~d~t~~~ 328 (524)
T COG0459 260 ATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIA------ILTGR-----RVKKEDLGERLAKLGGAKIVSVLKDLTTIV 328 (524)
T ss_pred HHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhc------ceecc-----eecchhhHHHHHHccCceEEeecccCceee
Confidence 4567778889999 89999999999999998864 35554 4456778 79999999 9999999999999
Q ss_pred cce--eeEEEE---ecccEEEEeCCC
Q 007981 357 LGI--ARKVTV---KSNSTTIVADPY 377 (582)
Q Consensus 357 lG~--~~~v~~---~~~~~~~~~~~~ 377 (582)
+|. |+.|+. ++++++++.++.
T Consensus 329 ~G~~~~~~ve~~~~~~~~~~~~~~~~ 354 (524)
T COG0459 329 LGEGAAGLVEETKTGDYDMEKLQERK 354 (524)
T ss_pred cCccccceEEEeeccchhhhhhhhhh
Confidence 999 999985 466777777664
No 47
>smart00574 POX domain associated with HOX domains.
Probab=33.53 E-value=1.4e+02 Score=27.56 Aligned_cols=60 Identities=18% Similarity=0.089 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhh
Q 007981 398 NAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIK 470 (582)
Q Consensus 398 ~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~ 470 (582)
+..|+..++.+.++|- .+++|++++++-...-++..+..- .|+|+|++-.+.+-+|+..+
T Consensus 68 s~~~r~e~q~kk~kLl-------------~mL~eVd~RY~qY~~qmq~v~ssFe~vaG~g~a~~yt~lAl~a~S 128 (140)
T smart00574 68 STAERQELQRKKAKLL-------------SMLEEVDRRYKHYYEQMQTVVSSFDQAAGLGAAKPYTALALKTIS 128 (140)
T ss_pred chhHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHH
Confidence 3456677777777662 456777777777766666666653 78999998888877777554
No 48
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=30.68 E-value=28 Score=39.21 Aligned_cols=53 Identities=21% Similarity=0.325 Sum_probs=45.5
Q ss_pred CCCEEEEecCcch-----HHHHHHHHhhhccce----eEEEEeCCCcCCCcHHHHHHHHHHhC
Q 007981 290 SVPLLIIAEDISS-----QVLETLVMNKIRGLL----NVAVVKCPGFGDGKKALLQDIALMTG 343 (582)
Q Consensus 290 ~~~lVI~~~~i~~-----~al~~L~~n~l~g~~----~v~aVk~~~~~~~~~~~Le~ia~~tG 343 (582)
..++.|..+++++ +++..++.++++++. ++++++++ +++.....|++.+++++
T Consensus 247 ~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~-i~d~~~~~L~~~~I~~~ 308 (522)
T TIGR02345 247 KDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLP-IGDLATQYFADHNIFCA 308 (522)
T ss_pred ccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCC-ccHHHHHHHHHCCcEEE
Confidence 4578888899988 888888888888755 78999998 89999999999999987
No 49
>KOG1593 consensus Asparaginase [Amino acid transport and metabolism]
Probab=26.42 E-value=1.1e+02 Score=31.41 Aligned_cols=58 Identities=16% Similarity=0.053 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHhhcC---ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcC
Q 007981 432 RKLRIEDAKNATFAAMDEG---IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAG 501 (582)
Q Consensus 432 ~~r~i~DAl~~~~~al~~g---vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG 501 (582)
--|+++||+++++..++.- ++.|-|++++.-+.-+.. +.+++.|.+ +....+.++|+.
T Consensus 104 ~lrrIkdai~vA~~Vleht~HTlLvGe~At~FA~smGf~~--e~Lst~es~----------~~~s~W~~~nCQ 164 (349)
T KOG1593|consen 104 DLRRIKDAIRVARHVLEHTQHTLLVGESATAFANSMGFKE--EDLSTEESK----------SWWSDWKAENCQ 164 (349)
T ss_pred hHHHHHHHHHHHHHHHhhhheeeeecccHHHHHHhcCCCc--cccCCHHHH----------HHHHHHHHhcCC
Confidence 3589999999999999873 999999999988777765 334444321 223356777875
No 50
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=21.13 E-value=95 Score=32.41 Aligned_cols=43 Identities=21% Similarity=0.630 Sum_probs=36.2
Q ss_pred ecceeEEEecccCCCH-----HhHHHHHHHHhc-CCCCEEEEecCcchH
Q 007981 261 FDNAKVLITDQKISTV-----KEIVPLLEKTTQ-LSVPLLIIAEDISSQ 303 (582)
Q Consensus 261 ~~n~kIll~~~~i~~~-----~el~~~le~i~~-~~~~lVI~~~~i~~~ 303 (582)
+..|.+++.|.|+.+. .|+++++|.+.+ .+.|++-++-++++.
T Consensus 144 Lt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~IPIlYVSHS~~Ev 192 (352)
T COG4148 144 LTAPELLLMDEPLASLDLPRKREILPYLERLRDEINIPILYVSHSLDEV 192 (352)
T ss_pred hcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCCCEEEEecCHHHH
Confidence 6788999999998765 479999998876 589999999999874
Done!