Query 007981
Match_columns 582
No_of_seqs 162 out of 1495
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 15:14:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 5E-122 2E-126 1017.0 53.9 519 50-571 2-527 (547)
2 1we3_A CPN60(groel); chaperoni 100.0 3E-121 1E-125 1011.6 56.7 528 49-579 1-537 (543)
3 3rtk_A 60 kDa chaperonin 2; he 100.0 4E-122 1E-126 1015.7 44.1 520 49-573 1-527 (546)
4 1iok_A Chaperonin 60; chaperon 100.0 2E-121 8E-126 1012.4 45.1 521 49-572 2-530 (545)
5 3p9d_C T-complex protein 1 sub 100.0 3E-104 9E-109 881.8 38.7 490 51-570 12-589 (590)
6 3ko1_A Chaperonin; 9-fold symm 100.0 1E-102 4E-107 865.9 46.9 479 39-579 13-545 (553)
7 3ruv_A Chaperonin, CPN; double 100.0 7E-102 2E-106 859.4 46.6 461 50-570 11-522 (543)
8 1a6d_B Thermosome (beta subuni 100.0 1E-101 4E-106 858.3 46.2 469 51-579 14-535 (543)
9 3iyg_B T-complex protein 1 sub 100.0 7E-101 2E-105 846.7 51.1 458 51-569 3-513 (513)
10 1q3q_A Thermosome alpha subuni 100.0 4E-101 1E-105 854.1 46.6 461 50-570 15-528 (548)
11 3p9d_E T-complex protein 1 sub 100.0 9E-102 3E-106 861.0 41.3 482 32-566 19-558 (562)
12 3p9d_A T-complex protein 1 sub 100.0 2E-101 7E-106 857.4 42.7 464 49-572 15-553 (559)
13 1a6d_A Thermosome (alpha subun 100.0 4E-101 2E-105 853.2 44.3 459 51-570 15-525 (545)
14 3iyg_H T-complex protein 1 sub 100.0 5E-100 2E-104 839.8 50.0 460 51-566 4-514 (515)
15 3iyg_A T-complex protein 1 sub 100.0 5E-100 2E-104 842.9 49.9 457 51-566 3-528 (529)
16 3p9d_D T-complex protein 1 sub 100.0 4E-101 1E-105 850.9 38.0 463 49-566 10-528 (528)
17 3iyg_E T-complex protein 1 sub 100.0 2.2E-99 7E-104 835.6 51.7 457 50-565 2-514 (515)
18 3iyg_D T-complex protein 1 sub 100.0 1.4E-99 5E-104 837.2 48.8 457 51-566 4-518 (518)
19 3p9d_G T-complex protein 1 sub 100.0 6E-101 2E-105 852.4 35.1 467 50-574 16-534 (550)
20 3p9d_B T-complex protein 1 sub 100.0 1E-100 4E-105 847.9 34.3 465 50-575 9-526 (527)
21 3iyg_G T-complex protein 1 sub 100.0 2.5E-98 8E-103 826.6 50.4 456 52-566 3-514 (515)
22 3iyg_Q T-complex protein 1 sub 100.0 7.4E-98 3E-102 822.8 49.4 456 51-566 3-512 (512)
23 3iyg_Z T-complex protein 1 sub 100.0 2.8E-97 9E-102 818.1 47.5 454 52-565 4-516 (517)
24 3p9d_H T-complex protein 1 sub 100.0 1.9E-98 6E-103 835.3 29.4 465 52-576 19-557 (568)
25 3p9d_F T-complex protein 1 sub 100.0 1.4E-96 5E-101 817.9 40.5 459 51-569 10-539 (546)
26 3aq1_B Thermosome subunit; gro 100.0 2.3E-91 7.7E-96 768.6 40.0 427 86-572 1-481 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 1.1E-43 3.6E-48 333.8 15.8 187 233-419 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 3E-42 1E-46 324.5 17.1 183 236-418 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 9.1E-32 3.1E-36 241.8 14.5 138 238-375 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.9 2.8E-22 9.4E-27 191.1 13.6 145 229-427 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.8 1.3E-18 4.4E-23 162.6 15.0 126 236-379 1-154 (159)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=5e-122 Score=1017.00 Aligned_cols=519 Identities=43% Similarity=0.711 Sum_probs=505.5
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
+|++.||.++|.+|++||+.|+++|+|||||+||+|||++ .|+|+|||||+||||+|+++||+||+||||++++|++||
T Consensus 2 ~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd 81 (547)
T 1kp8_A 2 AKDVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAN 81 (547)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhc
Confidence 6899999999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHHH
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNLI 208 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~li 208 (582)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++.++|.++|++|++++++|++|+
T Consensus 82 ~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~li 161 (547)
T 1kp8_A 82 DAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLI 161 (547)
T ss_dssp HHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHH
T ss_pred cccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHhc
Q 007981 209 ADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQ 288 (582)
Q Consensus 209 ~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~~ 288 (582)
+||+.+++++|.|++++|++++||+++++|++|+++|+||||++++++|+++++||||+++|++|+++++++++++++.+
T Consensus 162 adAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~ 241 (547)
T 1kp8_A 162 AEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAK 241 (547)
T ss_dssp HHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHG
T ss_pred HHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Ccccc-----ccCCCccccceeeE
Q 007981 289 LSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLT-----LAGATSDQLGIARK 362 (582)
Q Consensus 289 ~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~-----l~~l~~~~lG~~~~ 362 (582)
+|+||||++++|+++|+++|..|+++|.++|+|||+|+|++.++.+|+|||++|| +++++ ++++++++||+|+.
T Consensus 242 ~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~ 321 (547)
T 1kp8_A 242 AGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKR 321 (547)
T ss_dssp GGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEE
T ss_pred cCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeE
Confidence 9999999999999999999999999999999999999999999999999999999 77764 99999999999999
Q ss_pred EEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHH
Q 007981 363 VTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNA 442 (582)
Q Consensus 363 v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~ 442 (582)
|+++++++++|++|++++.+++|+++|+.+++.++++|++|+|+||+++|++++|||+|||+|+.+++|+||++|||||+
T Consensus 322 v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~ 401 (547)
T 1kp8_A 322 VVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHA 401 (547)
T ss_dssp EEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHH
T ss_pred EEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcCCCcceeec
Q 007981 443 TFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYNA 522 (582)
Q Consensus 443 ~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~Gid~ 522 (582)
+|+++++|+|||||++|++|+.+|++++. .+ .++++++++|++||+.||++||+|||+|+.+++++|++.+.++|||+
T Consensus 402 ~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~-g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~~~~~G~d~ 479 (547)
T 1kp8_A 402 TRAAVEEGVVAGGGVALIRVASKLADLRG-QN-ADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA 479 (547)
T ss_dssp HHHHHHHCEEETTTHHHHHHHHHTTTCCC-SS-HHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHSCTTEEEET
T ss_pred HHHhccCCEEeCCcHHHHHHHHHHHHHhc-cC-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCEeEeC
Confidence 99999999999999999999999999875 44 45679999999999999999999999999999999998778899999
Q ss_pred CCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCC
Q 007981 523 MTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPK 571 (582)
Q Consensus 523 ~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~ 571 (582)
.+|++.||++.|||||+.||+++|++|+++|++||++|++|..+ |+++
T Consensus 480 ~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~-~~~~ 527 (547)
T 1kp8_A 480 ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDL-PKND 527 (547)
T ss_dssp TTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEEC-CC--
T ss_pred CCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecC-CccC
Confidence 99999999999999999999999999999999999999999998 8765
No 2
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=3.3e-121 Score=1011.58 Aligned_cols=528 Identities=48% Similarity=0.761 Sum_probs=505.4
Q ss_pred ccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
++|++.||.++|.+|++||..|+++|+|||||+||+|||++ .|+++|||||+||||+|+++||+||+||||++++|++|
T Consensus 1 ~~k~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 80 (543)
T 1we3_A 1 MAKILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKT 80 (543)
T ss_dssp -CEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhh
Confidence 47899999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~l 207 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++.++|.++|++|++ +++|+++
T Consensus 81 d~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~l 159 (543)
T 1we3_A 81 NDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKL 159 (543)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred heecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHh
Q 007981 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (582)
Q Consensus 208 i~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~ 287 (582)
++||+.+++++|.|++++|++++|++++++|++|+++|+||||++++++|+++++||||+++|++|+++++++++++++.
T Consensus 160 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~ 239 (543)
T 1we3_A 160 IADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVA 239 (543)
T ss_dssp HHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Ccccc-----ccCCCccccceee
Q 007981 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLT-----LAGATSDQLGIAR 361 (582)
Q Consensus 288 ~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~-----l~~l~~~~lG~~~ 361 (582)
++|+||||++++|+++|+++|..|+++|.++|+|||+|+|++.++.+|+|||++|| +++++ ++++++++||+|+
T Consensus 240 ~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~ 319 (543)
T 1we3_A 240 QTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAE 319 (543)
T ss_dssp TTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEE
T ss_pred hcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCce
Confidence 99999999999999999999999999999999999999999999999999999999 77764 8999999999999
Q ss_pred EEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHH
Q 007981 362 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 441 (582)
Q Consensus 362 ~v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~ 441 (582)
.|+++++++++|++|++++.+++|+++|+.+++.++++|++++|+||+++|++++|||+|||+|+.+++|+||++|||||
T Consensus 320 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~ 399 (543)
T 1we3_A 320 RVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALN 399 (543)
T ss_dssp EEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc--CCCcce
Q 007981 442 ATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT--SDWRFG 519 (582)
Q Consensus 442 ~~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~--~~~~~G 519 (582)
++|+++++|+|||||++|++|+.+|++++.+.++ ++++++++|++||+.||++||+|||+|+.+++++|++ .+.++|
T Consensus 400 ~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g-~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G 478 (543)
T 1we3_A 400 ATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEG-DEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYG 478 (543)
T ss_dssp HHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCH-HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEE
T ss_pred HHHHHhccCcCCCccHHHHHHHHHHHHHhhccCc-hHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEE
Confidence 9999999999999999999999999999876555 4679999999999999999999999999999999998 567899
Q ss_pred eecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCCCCCCCCC
Q 007981 520 YNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPAVPQVPG 579 (582)
Q Consensus 520 id~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~~~~~~~~ 579 (582)
||+.+|++.||++.|||||+.||+++|++|+++|++||++|++|..+ |++++.+|+.+|
T Consensus 479 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~-~~~~~~~~~~~~ 537 (543)
T 1we3_A 479 FNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEK-PEKKESTPASAG 537 (543)
T ss_dssp EETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEEC-SCC---------
T ss_pred EeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999998 876554444443
No 3
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=3.8e-122 Score=1015.68 Aligned_cols=520 Identities=48% Similarity=0.729 Sum_probs=428.5
Q ss_pred ccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
++|++.||.++|.+|+.||+.|+++|+|||||+||+|||++ .|+++|||||+||||+|+++||++|+||||++++|++|
T Consensus 1 ~~k~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~q 80 (546)
T 3rtk_A 1 MAKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKT 80 (546)
T ss_dssp ------------------------------------------------------------CCCHHHHHHHHHHHHHHTSC
T ss_pred CCceeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhh
Confidence 47999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~l 207 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++.|+++.++|.++|++|++ +++++++
T Consensus 81 d~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~l 159 (546)
T 3rtk_A 81 DDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDL 159 (546)
T ss_dssp C-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred hhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 8899999
Q ss_pred HHHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHh
Q 007981 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (582)
Q Consensus 208 i~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~ 287 (582)
++||+.+++++|.|+++.+.+..+++++++||+|+++|+||||++++++|+++++||||+++|++|+++++++++++++.
T Consensus 160 iadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~ 239 (546)
T 3rtk_A 160 IAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVI 239 (546)
T ss_dssp HHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHH
T ss_pred HHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHH
Confidence 99999999999999998887776555999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Cccc-----cccCCCccccceee
Q 007981 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGL-----TLAGATSDQLGIAR 361 (582)
Q Consensus 288 ~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~-----~l~~l~~~~lG~~~ 361 (582)
++|+|||||+++|+++|+++|..|+++|+++++|||+|+|++.++.+|+|||++|| ++++ +++++++++||+|+
T Consensus 240 ~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~ 319 (546)
T 3rtk_A 240 GAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKAR 319 (546)
T ss_dssp TTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEE
T ss_pred hcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeE
Confidence 99999999999999999999999999999999999999999999999999999999 7776 68999999999999
Q ss_pred EEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHH
Q 007981 362 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 441 (582)
Q Consensus 362 ~v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~ 441 (582)
.|+++++++++|++|++++.++.|+++|+++++.++++|++|+|+||+++|+|++|||+|||+|+.+++|+||++|||||
T Consensus 320 ~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~ 399 (546)
T 3rtk_A 320 KVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVR 399 (546)
T ss_dssp EEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHH
T ss_pred EEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcCCCcceee
Q 007981 442 ATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSDWRFGYN 521 (582)
Q Consensus 442 ~~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~Gid 521 (582)
++|+++++|+|||||++|++|+.+|++++ .++. +++++++|++||+.||++||+|||+|+.+++++|++....+|||
T Consensus 400 a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~G~d 476 (546)
T 3rtk_A 400 NAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEGD-EATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLN 476 (546)
T ss_dssp HHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCTT-HHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSCTTEECC
T ss_pred HHHHHHhCCcccCCcHHHHHHHHHHHHhc--cccH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCEeEc
Confidence 99999999999999999999999999987 4554 57999999999999999999999999999999999876669999
Q ss_pred cCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCCC
Q 007981 522 AMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPA 573 (582)
Q Consensus 522 ~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~~ 573 (582)
+.+|++.||++.|||||+.||+++|++|+++|++||++|++|..+ |+++++
T Consensus 477 ~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~-~~~~~~ 527 (546)
T 3rtk_A 477 AQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADK-PEKEKA 527 (546)
T ss_dssp SSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred CCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCC
Confidence 999999999999999999999999999999999999999999998 876553
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=2.2e-121 Score=1012.42 Aligned_cols=521 Identities=46% Similarity=0.746 Sum_probs=469.2
Q ss_pred ccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
++|++.||.++|.+|++||..|+++|+|||||+||+|||++ .|+++|||||+||||+|+++||+||+||||++++|++|
T Consensus 2 ~~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 81 (545)
T 1iok_A 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRT 81 (545)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHG
T ss_pred CchhhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhh
Confidence 58999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHhcCCchhHHHH
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGRDDIKAVASISAGNDEFIGNL 207 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~L~~va~ts~~~~~~l~~l 207 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++.++|.++|++|++++++|+++
T Consensus 82 d~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~l 161 (545)
T 1iok_A 82 NDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQ 161 (545)
T ss_dssp GGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHH
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHHHHhccCCcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHh
Q 007981 208 IADAIIKIGADGVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTT 287 (582)
Q Consensus 208 i~~Av~~v~~~g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~ 287 (582)
++||+.+++++|.|++++|++++||+++++|++|+++|+||||++++++|+++++||||+++|++|+++++++++++++.
T Consensus 162 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~ 241 (545)
T 1iok_A 162 IAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVI 241 (545)
T ss_dssp HHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC---------
T ss_pred HHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-Ccccc-----ccCCCccccceee
Q 007981 288 QLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLT-----LAGATSDQLGIAR 361 (582)
Q Consensus 288 ~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~-----l~~l~~~~lG~~~ 361 (582)
++|+||||++++|+++|+++|..|+++|.++|+|||+|+|+++++.+|+|||++|| +++++ ++++++++||+|+
T Consensus 242 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~ 321 (545)
T 1iok_A 242 QSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAK 321 (545)
T ss_dssp --CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEE
T ss_pred hcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCc
Confidence 99999999999999999999999999999999999999999999999999999999 77775 9999999999999
Q ss_pred EEEEecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHH
Q 007981 362 KVTVKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKN 441 (582)
Q Consensus 362 ~v~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~ 441 (582)
.|+++++++++|++|++++.+++|+++|+.+++.++++|++|+|+||+++|++++|||+|||+|+.+++|+||++|||||
T Consensus 322 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~ 401 (545)
T 1iok_A 322 KVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALN 401 (545)
T ss_dssp EEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC-CCccee
Q 007981 442 ATFAAMDEGIVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS-DWRFGY 520 (582)
Q Consensus 442 ~~~~al~~gvvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~-~~~~Gi 520 (582)
++|+++++|+|||||++|++|+.+|++++. .++ ++++++++|++||+.||++||+|||+|+.+++++|++. ++++||
T Consensus 402 ~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~g-~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~ 479 (545)
T 1iok_A 402 ATRAAVQEGIVVGGGVALVQGAKVLEGLSG-ANS-DQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGF 479 (545)
T ss_dssp HHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SSH-HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEE
T ss_pred HHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cCc-hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeE
Confidence 999999999999999999999999999876 444 56799999999999999999999999999999999987 678999
Q ss_pred ecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCC
Q 007981 521 NAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 572 (582)
Q Consensus 521 d~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~ 572 (582)
|+.+|++.||++.|||||+.||+++|++|+++|++||++|++|... |++++
T Consensus 480 d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~-~~~~~ 530 (545)
T 1iok_A 480 NAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEK-PEPKA 530 (545)
T ss_dssp ETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEEC-C----
T ss_pred eCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccC-CccCC
Confidence 9999999999999999999999999999999999999999999998 87654
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=2.6e-104 Score=881.76 Aligned_cols=490 Identities=21% Similarity=0.278 Sum_probs=423.6
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.++.+|.++|..|+.||+.|+++|+|||||+||+|||++ .|+++|||||+|||++|+++||+ |||++++|++||+
T Consensus 12 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Akll~e~a~~qd~ 87 (590)
T 3p9d_C 12 QERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AKSMLELSRTQDE 87 (590)
T ss_dssp CCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HHTHHHHTTTHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HHHHHHHHHhhhh
Confidence 477899999999999999999999999999999999999 99999999999999999999996 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhh-hhCCCChHHHHHHHHHHHHHHHHHHHccCcccCC--HHHHHHHHHHhcCC------
Q 007981 130 LAGDGTTTAVILAREMIKSGMLS-VSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG--RDDIKAVASISAGN------ 200 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~l-i~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~~~L~~va~ts~~~------ 200 (582)
++||||||+||||++||+++.++ +++|+||+.|++||++|++.++++|+++++|++. .+.|.++|+||+++
T Consensus 88 e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~ 167 (590)
T 3p9d_C 88 EVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHW 167 (590)
T ss_dssp HCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGG
T ss_pred hhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhccccccc
Confidence 99999999999999999999999 9999999999999999999999999999999873 68999999998754
Q ss_pred chhHHHHHHHHHHHhccCCc----------------EEE--eCCCCcccceeeeeceEEecccCCccccccccccceeec
Q 007981 201 DEFIGNLIADAIIKIGADGV----------------ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFD 262 (582)
Q Consensus 201 ~~~l~~li~~Av~~v~~~g~----------------I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~ 262 (582)
+++|++|++||+.++++++. |++ ..|+++.|+ ++++||+|++++.||. |+++++
T Consensus 168 ~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~~-------m~~~~e 239 (590)
T 3p9d_C 168 SEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHPK-------MSRHIE 239 (590)
T ss_dssp HHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCTT-------SCSCEE
T ss_pred HHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCCC-------Ccceee
Confidence 68999999999999987643 333 469999998 9999999999998873 889999
Q ss_pred ceeEEEecccC-------------CCHHhHHHH-----------HHHHhcCCCCEEEEecCcchHHHHHHHHhhhcccee
Q 007981 263 NAKVLITDQKI-------------STVKEIVPL-----------LEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLN 318 (582)
Q Consensus 263 n~kIll~~~~i-------------~~~~el~~~-----------le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~ 318 (582)
||||+++++++ ++++++.++ ++++.++|++|||++++|+++|+++|..+++
T Consensus 240 n~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I----- 314 (590)
T 3p9d_C 240 NPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGC----- 314 (590)
T ss_dssp SCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTC-----
T ss_pred eeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccc-----
Confidence 99999999964 445565544 4688899999999999999999999998753
Q ss_pred EEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccce-eeEEE---EecccEEEEeCCCChHH------------
Q 007981 319 VAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGI-ARKVT---VKSNSTTIVADPYTKAE------------ 381 (582)
Q Consensus 319 v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~-~~~v~---~~~~~~~~~~~~~~~~~------------ 381 (582)
+| ++++++.+|+|||++|| +++++++++++++||+ |+.|+ +++++|++|++|+++..
T Consensus 315 -~a-----v~~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~ 388 (590)
T 3p9d_C 315 -SV-----LRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKG 388 (590)
T ss_dssp -CC-----CCCCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC------------------
T ss_pred -ee-----eccCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccc
Confidence 33 67889999999999999 9999999999999999 99997 57899999999999888
Q ss_pred --------------HHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHh
Q 007981 382 --------------IQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAM 447 (582)
Q Consensus 382 --------------i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al 447 (582)
|++|+++|+.+++.++++|+++ +++|+|++|||+|||+|+.+++|+||++|||||++|+++
T Consensus 389 ~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av 463 (590)
T 3p9d_C 389 SGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVM 463 (590)
T ss_dssp --------------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999966 478999999999999999999999999999999999999
Q ss_pred hcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeec
Q 007981 448 DEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNA 522 (582)
Q Consensus 448 ~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~ 522 (582)
++| +|||||++|++|+.+|.+++.++++.+ ++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+
T Consensus 464 ~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~ 542 (590)
T 3p9d_C 464 LSPSLSPGGGATEMAVSVKLAEKAKQLEGIQ-QWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDG 542 (590)
T ss_dssp HCCCEECTTTHHHHHHHHHHHHHHHHSCSTT-HHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCT
T ss_pred hcCCEEeCccHHHHHHHHHHHHHhhcCChHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeC
Confidence 995 999999999999999999987777754 699999999999999999999999999999999873 57899999
Q ss_pred CCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCC
Q 007981 523 MTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQP 570 (582)
Q Consensus 523 ~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~ 570 (582)
.+|++.||++.|||||+.||+++|++|+++|++|||||++|... |+.
T Consensus 543 ~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~-~~~ 589 (590)
T 3p9d_C 543 DKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGV-RKQ 589 (590)
T ss_dssp TSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCC-C--
T ss_pred CCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCC
Confidence 99999999999999999999999999999999999999999887 653
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.2e-102 Score=865.86 Aligned_cols=479 Identities=21% Similarity=0.325 Sum_probs=423.0
Q ss_pred cchhhHHhhcccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHh
Q 007981 39 SRKMVAVVRAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGA 117 (582)
Q Consensus 39 ~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~a 117 (582)
|+|+++..+ ..++.+|.++|..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |
T Consensus 13 ~~~~~~l~~--~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----A 86 (553)
T 3ko1_A 13 GIPVIILKE--GSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPA----A 86 (553)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHH----H
T ss_pred CCeEEEEec--CcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChh----H
Confidence 677766665 3678899999999999999999999999999999999999 99999999999999999999995 9
Q ss_pred HHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHH
Q 007981 118 MLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVAS 195 (582)
Q Consensus 118 kLl~~~a~~qd~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ 195 (582)
||++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +.+.|.++|+
T Consensus 87 kll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~ 166 (553)
T 3ko1_A 87 KLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAM 166 (553)
T ss_dssp HHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHH
T ss_pred HHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 7899999999
Q ss_pred HhcCC------chhHHHHHHHHHHHhccC--Cc-------EEEe--CCCCcccceeeeeceEEecccCCccccccccccc
Q 007981 196 ISAGN------DEFIGNLIADAIIKIGAD--GV-------ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSL 258 (582)
Q Consensus 196 ts~~~------~~~l~~li~~Av~~v~~~--g~-------I~i~--~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~ 258 (582)
||+++ +++|++|++||+.+++++ |. |+++ .|+++.|+ ++++|++|+++|.||| |+
T Consensus 167 tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~ 238 (553)
T 3ko1_A 167 TSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPG-------MP 238 (553)
T ss_dssp HHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTT-------SC
T ss_pred HHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCC-------Cc
Confidence 99986 689999999999999885 65 7774 78899998 9999999999999997 57
Q ss_pred eeecceeEEEeccc-------------CCCHHh-----------HHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhc
Q 007981 259 VEFDNAKVLITDQK-------------ISTVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIR 314 (582)
Q Consensus 259 ~~~~n~kIll~~~~-------------i~~~~e-----------l~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~ 314 (582)
++++||||++++++ |+++++ +.++++++.++|+|||||+++|+++++++|.++.
T Consensus 239 ~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~g-- 316 (553)
T 3ko1_A 239 KRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKG-- 316 (553)
T ss_dssp SCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHT--
T ss_pred cccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcc--
Confidence 88999999999995 566766 4567889999999999999999999999998654
Q ss_pred cceeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHH
Q 007981 315 GLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIK 390 (582)
Q Consensus 315 g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~ 390 (582)
+++|+ ++++.+|+|||++|| +++++++++++++||+|+.|++ +++++++|++|+++
T Consensus 317 ----I~~v~-----~v~k~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~----------- 376 (553)
T 3ko1_A 317 ----VLAVR-----RAKKSDLEKLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP----------- 376 (553)
T ss_dssp ----CEEEC-----CCCHHHHHHHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS-----------
T ss_pred ----hhhhh-----hhhhhhHHHHHHhhCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCCCC-----------
Confidence 35665 567999999999999 9999999999999999999996 48999999999865
Q ss_pred HHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhh
Q 007981 391 KDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPII 469 (582)
Q Consensus 391 ~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~ 469 (582)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|+++
T Consensus 377 ------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~ 432 (553)
T 3ko1_A 377 ------------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKY 432 (553)
T ss_dssp ------------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHH
T ss_pred ------------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHh
Confidence 479999999999999999999999999999999999 9999999999999999999
Q ss_pred hccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcCC-----CcceeecCCCcccccccCcccccHHHHHH
Q 007981 470 KNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTSD-----WRFGYNAMTGRYEDLLSAGVADPCRVARC 544 (582)
Q Consensus 470 ~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~-----~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~ 544 (582)
+.++++.+ ++++++|++||+.||++||+|||+|+.+++.+|++.+ +++|||+.+|++.||++.|||||+.||++
T Consensus 433 ~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~ 511 (553)
T 3ko1_A 433 APQVGGKE-QLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMN 511 (553)
T ss_dssp HHHHCSHH-HHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHH
T ss_pred ccccCChh-HhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhh
Confidence 87777764 6999999999999999999999999999999998852 67999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHChhHHhcCCCCCCCCCCCCCCC
Q 007981 545 ALQNAVSIAAVVLTTEAVLADKIKQPKPAVPQVPG 579 (582)
Q Consensus 545 ~l~~A~e~a~~iL~iD~iI~~~~p~~~~~~~~~~~ 579 (582)
+|++|+++|++|||||++|... |+.++.+|+..|
T Consensus 512 al~~A~e~a~~iL~iD~ii~~~-~~~~~~~~~~~~ 545 (553)
T 3ko1_A 512 AIKAATEAATLVLRIDDVVSAG-KKSGGESKTPGG 545 (553)
T ss_dssp HHHHHHHHHHHHHHEEEECCC--------------
T ss_pred hhhhcchhheEEEehHHHHHhh-hhccCCCCCCCc
Confidence 9999999999999999999998 877665555443
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=6.8e-102 Score=859.37 Aligned_cols=461 Identities=26% Similarity=0.364 Sum_probs=427.3
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
..++.+|.++|..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |||++++|++||
T Consensus 11 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 86 (543)
T 3ruv_A 11 NMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLIEVAKTQE 86 (543)
T ss_dssp SEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHHHHHHHHH
T ss_pred CcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999999 99999999999999999999995 999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCC------
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------ 200 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~------ 200 (582)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++ +.+.|.++|+||+++
T Consensus 87 ~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~ 166 (543)
T 3ruv_A 87 KEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKA 166 (543)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGC
T ss_pred hhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchh
Confidence 999999999999999999999999999999999999999999999999999999998 789999999999874
Q ss_pred chhHHHHHHHHHHHhccC-Cc-----EEEe--CCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc
Q 007981 201 DEFIGNLIADAIIKIGAD-GV-----ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (582)
Q Consensus 201 ~~~l~~li~~Av~~v~~~-g~-----I~i~--~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~ 272 (582)
+++|++|++||+.+++++ |. |+++ .|+++.|+ ++++|++|+++|.||| |+++++||||+++|++
T Consensus 167 ~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~~n~kIll~~~~ 238 (543)
T 3ruv_A 167 KEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQ-------MPKKVTDAKIALLNCA 238 (543)
T ss_dssp CHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTT-------SCSEEEEEEEEEESSC
T ss_pred HHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCcc-------ccccccCcEEEEEccc
Confidence 789999999999999987 65 7764 78899998 9999999999999998 5788999999999996
Q ss_pred -------------CCCHHh-----------HHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcC
Q 007981 273 -------------ISTVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFG 328 (582)
Q Consensus 273 -------------i~~~~e-----------l~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~ 328 (582)
|+++++ +.++++++.++|+|||||+++|+++|+++|.++. +++|+
T Consensus 239 Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~g------I~~v~----- 307 (543)
T 3ruv_A 239 IEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEG------IVAAR----- 307 (543)
T ss_dssp BSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTT------CEEEC-----
T ss_pred ccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcC------cEEEe-----
Confidence 455555 4567889999999999999999999999998653 36665
Q ss_pred CCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEEe---cccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHH
Q 007981 329 DGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRK 404 (582)
Q Consensus 329 ~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~~---~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~ 404 (582)
++++.+|+|||++|| +++++++++++++||+|+.|++. ++++++|++|+++
T Consensus 308 ~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------------------- 362 (543)
T 3ruv_A 308 RVKKSDMEKLAKATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECKHP------------------------- 362 (543)
T ss_dssp SCCHHHHHHHHHHHCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC-------------------------
T ss_pred eCCHHHHHHHHHHhCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCCCC-------------------------
Confidence 567999999999999 99999999999999999999864 8899999999765
Q ss_pred HHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHH
Q 007981 405 LSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGAD 483 (582)
Q Consensus 405 l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~ 483 (582)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.++++.+ +++++
T Consensus 363 ----------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~e-q~~i~ 431 (543)
T 3ruv_A 363 ----------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGRE-QLAVR 431 (543)
T ss_dssp ----------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTH-HHHHH
T ss_pred ----------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHH-HHHHH
Confidence 369999999999999999999999999999999999 999999999999999999988777764 69999
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHhhcC-----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHC
Q 007981 484 IVAKALIVPAISIATNAGVDGTIVVEKTRTS-----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLT 558 (582)
Q Consensus 484 ~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~-----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~ 558 (582)
+|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+++|++|||
T Consensus 432 ~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~ 511 (543)
T 3ruv_A 432 AFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLR 511 (543)
T ss_dssp HHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999873 36799999999999999999999999999999999999999999
Q ss_pred hhHHhcCCCCCC
Q 007981 559 TEAVLADKIKQP 570 (582)
Q Consensus 559 iD~iI~~~~p~~ 570 (582)
||++|... |+.
T Consensus 512 id~ii~~~-~~~ 522 (543)
T 3ruv_A 512 IDDVIAAE-KLR 522 (543)
T ss_dssp CCEEEEEC----
T ss_pred HHhheecC-ccC
Confidence 99999987 764
No 8
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=1.1e-101 Score=858.27 Aligned_cols=469 Identities=23% Similarity=0.357 Sum_probs=422.4
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.++.||.++|..|+.||..|+++|+|||||+||+|||++ .|+++|||||+||||+|+++||. ||||+++|++||+
T Consensus 14 ~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~ 89 (543)
T 1a6d_B 14 TKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----AKMMVEVSKTQDS 89 (543)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----HHHHHHHHTCTTC
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----HHHHHHHHHhcCC
Confidence 568999999999999999999999999999999999999 99999999999999999999995 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCC--HHHHHHHHHHhcCC------c
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG--RDDIKAVASISAGN------D 201 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~~~L~~va~ts~~~------~ 201 (582)
++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++++.|++. .+.|.++|+||+++ +
T Consensus 90 e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~ 169 (543)
T 1a6d_B 90 FVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAK 169 (543)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGH
T ss_pred EECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccH
Confidence 999999999999999999999999999999999999999999999999999999974 78999999988654 5
Q ss_pred hhHHHHHHHHHHHhccC--Cc-------EEEe--CCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEec
Q 007981 202 EFIGNLIADAIIKIGAD--GV-------ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (582)
Q Consensus 202 ~~l~~li~~Av~~v~~~--g~-------I~i~--~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~ 270 (582)
++|++|++||+.+++++ |. |+++ +|++++|+ ++++|++|+++|.||| |+++++||||++++
T Consensus 170 ~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~ 241 (543)
T 1a6d_B 170 DKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPG-------MPDVVKDAKIALLD 241 (543)
T ss_dssp HHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTT-------SCSEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCC-------CcceecCCeEEEEe
Confidence 88999999999999876 53 7775 99999999 9999999999999998 56789999999999
Q ss_pred cc-------------CCCHHhH-----------HHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCC
Q 007981 271 QK-------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (582)
Q Consensus 271 ~~-------------i~~~~el-----------~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~ 326 (582)
++ |++++++ .++++++.++|+||||++++|+++|+++|..|+ |+||+
T Consensus 242 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~--- 312 (543)
T 1a6d_B 242 APLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAVR--- 312 (543)
T ss_dssp SCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEEC---
T ss_pred cccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEec---
Confidence 99 6667765 678999999999999999999999999999986 47774
Q ss_pred cCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHH
Q 007981 327 FGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLS 402 (582)
Q Consensus 327 ~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~ 402 (582)
++++.+|+|||++|| +++++++++++++||+|+.|++ +++++++|++|+++
T Consensus 313 --~v~k~~le~ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~----------------------- 367 (543)
T 1a6d_B 313 --RVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNP----------------------- 367 (543)
T ss_dssp --SCCHHHHHHHHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSS-----------------------
T ss_pred --cCCHHHHHHHHHHhCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCCCC-----------------------
Confidence 678999999999999 9999999999999999999986 58999999998753
Q ss_pred HHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHH
Q 007981 403 RKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIG 481 (582)
Q Consensus 403 ~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~ 481 (582)
+.|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.+.++. ++++
T Consensus 368 ------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~-~q~~ 434 (543)
T 1a6d_B 368 ------------KAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGR-QQLA 434 (543)
T ss_dssp ------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSS-HHHH
T ss_pred ------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCCh-HHHH
Confidence 589999999999999999999999999999999999 99999999999999999998777775 4699
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHH
Q 007981 482 ADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVL 557 (582)
Q Consensus 482 i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL 557 (582)
+++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.||+++|++|+++|++||
T Consensus 435 i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL 514 (543)
T 1a6d_B 435 IEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMIL 514 (543)
T ss_dssp HHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999963 4589999999999999999999999999999999999999999
Q ss_pred ChhHHhcCCCCCCCCCCCCCCC
Q 007981 558 TTEAVLADKIKQPKPAVPQVPG 579 (582)
Q Consensus 558 ~iD~iI~~~~p~~~~~~~~~~~ 579 (582)
++|++|... |+++++.|.++|
T Consensus 515 ~id~iI~~~-~~~~~~~~~~~~ 535 (543)
T 1a6d_B 515 RIDDVIATK-SSSSSSNPPKSG 535 (543)
T ss_dssp HEEEEEC---------------
T ss_pred HHHHHHhcC-ccCCCCCCCCCC
Confidence 999999998 877766676666
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=6.7e-101 Score=846.70 Aligned_cols=458 Identities=21% Similarity=0.303 Sum_probs=427.1
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-C--CCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-S--DKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~--g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
.++.||.++|.+|+.||+.|+++|||||||+||+|||++ . |+++|||||+||||+|+++|| +|||++++|++|
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp----~Akll~e~a~~q 78 (513)
T 3iyg_B 3 ADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNP----AAKVLVDMSRVQ 78 (513)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCH----HHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999 8 999999999999999999999 599999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC-----CHHHHHHHHHHhcC---
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-----GRDDIKAVASISAG--- 199 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~~~L~~va~ts~~--- 199 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++++.|++ +.+.|.++|+||++
T Consensus 79 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~ 158 (513)
T 3iyg_B 79 DDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKL 158 (513)
T ss_pred hhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccc
Confidence 9999999999999999999999999999999999999999999999999999999997 57899999998875
Q ss_pred ---CchhHHHHHHHHHHHhccC---CcEEEe--CCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecc
Q 007981 200 ---NDEFIGNLIADAIIKIGAD---GVILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (582)
Q Consensus 200 ---~~~~l~~li~~Av~~v~~~---g~I~i~--~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~ 271 (582)
++++|++|++||+.+++++ +.|+++ .|+++.|+ ++++||+|+++|.|| |+++++||||+++|+
T Consensus 159 ~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~~~ 229 (513)
T 3iyg_B 159 LTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIANT 229 (513)
T ss_pred cccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEEcC
Confidence 4589999999999999987 778774 69999998 999999999999987 778999999999999
Q ss_pred c--------------CCCHHhHH-----------HHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCC
Q 007981 272 K--------------ISTVKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (582)
Q Consensus 272 ~--------------i~~~~el~-----------~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~ 326 (582)
+ |++++++. ++++++.++|+|||||+++|+++++++|..++ |+|||+++
T Consensus 230 ~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~------I~av~~~~ 303 (513)
T 3iyg_B 230 GMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAG------VMAIEHAD 303 (513)
T ss_pred CcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcC------ceEEecCC
Confidence 4 45666664 36889999999999999999999999998754 68999887
Q ss_pred cCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHH
Q 007981 327 FGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLS 402 (582)
Q Consensus 327 ~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~ 402 (582)
+.+|+|||++|| +++++++++++++||+|+.|+ ++++++++|++|++
T Consensus 304 -----~~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------------ 354 (513)
T 3iyg_B 304 -----FVGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL------------------------ 354 (513)
T ss_pred -----HHHHHHHHHHhCCEEecccccCCHhHCCcccEEEEEEECCeEEEEEecCCC------------------------
Confidence 478999999999 999999999999999999998 58899999999864
Q ss_pred HHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHH
Q 007981 403 RKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIG 481 (582)
Q Consensus 403 ~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~ 481 (582)
+++|||+|||+|+.+++|+||++|||||++|++++++ +|||||++|++|+.+|++++.+.++. ++++
T Consensus 355 -----------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~-~q~~ 422 (513)
T 3iyg_B 355 -----------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGK-EAVA 422 (513)
T ss_pred -----------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcH-HHHH
Confidence 3589999999999999999999999999999999995 99999999999999999998877776 4699
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHH
Q 007981 482 ADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVL 557 (582)
Q Consensus 482 i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL 557 (582)
+++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.||+++|++|+++|++||
T Consensus 423 i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL 502 (513)
T 3iyg_B 423 MESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVIL 502 (513)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999884 5689999999999999999999999999999999999999999
Q ss_pred ChhHHhcCCCCC
Q 007981 558 TTEAVLADKIKQ 569 (582)
Q Consensus 558 ~iD~iI~~~~p~ 569 (582)
|||++|+.+ |+
T Consensus 503 ~id~ii~~~-~~ 513 (513)
T 3iyg_B 503 RVDNIIKAA-PR 513 (513)
T ss_pred HHHHHHhcC-CC
Confidence 999999987 64
No 10
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=3.9e-101 Score=854.14 Aligned_cols=461 Identities=24% Similarity=0.375 Sum_probs=430.7
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
.+++.||.++|..|++||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. ||||+++|++||
T Consensus 15 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 90 (548)
T 1q3q_A 15 GTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AKMMVEVAKTQD 90 (548)
T ss_dssp TCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHHHH
T ss_pred CcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HHHHHHHHHhcC
Confidence 4778999999999999999999999999999999999999 99999999999999999999995 999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCC------
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN------ 200 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~------ 200 (582)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++++.|++ +.+.|.++|+||+++
T Consensus 91 ~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~ 170 (548)
T 1q3q_A 91 KEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESH 170 (548)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGG
T ss_pred CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccc
Confidence 999999999999999999999999999999999999999999999999999999987 489999999998754
Q ss_pred chhHHHHHHHHHHHhccC--C-------cEEEe--CCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEe
Q 007981 201 DEFIGNLIADAIIKIGAD--G-------VILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLIT 269 (582)
Q Consensus 201 ~~~l~~li~~Av~~v~~~--g-------~I~i~--~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~ 269 (582)
+++|++|++||+.+++++ | .|+++ +|++++|| ++++|++|+++|.||| |+++++||||+++
T Consensus 171 ~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~ 242 (548)
T 1q3q_A 171 KELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPR-------MPKRVENAKIALI 242 (548)
T ss_dssp HHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTT-------SCSEESSEEEEEE
T ss_pred hHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCC-------CcceecCCEEEEE
Confidence 589999999999999875 4 68776 99999999 9999999999999998 4678999999999
Q ss_pred ccc-------------CCCHHhH-----------HHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCC
Q 007981 270 DQK-------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (582)
Q Consensus 270 ~~~-------------i~~~~el-----------~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~ 325 (582)
+++ |++++++ .++++++.++|+||||++++|+++|+++|..|+ |+||+
T Consensus 243 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-- 314 (548)
T 1q3q_A 243 NEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVR-- 314 (548)
T ss_dssp CSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEEC--
T ss_pred ecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEc--
Confidence 999 6777775 678999999999999999999999999999986 47774
Q ss_pred CcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHH
Q 007981 326 GFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYL 401 (582)
Q Consensus 326 ~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e 401 (582)
++++.+|+|||++|| +++++++++++++||+|+.|++ ++++|++|++|+++
T Consensus 315 ---~~~k~~le~ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~---------------------- 369 (548)
T 1q3q_A 315 ---RVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNP---------------------- 369 (548)
T ss_dssp ---SCCHHHHHHHHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSC----------------------
T ss_pred ---cCCHHHHHHHHHHhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCCCC----------------------
Confidence 778999999999999 9999999999999999999987 48999999999753
Q ss_pred HHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHH
Q 007981 402 SRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQI 480 (582)
Q Consensus 402 ~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~ 480 (582)
++|||+|||+|+.+++|+||++|||+|++|+++++| +|||||++|++|+.+|++++.+.++. +++
T Consensus 370 -------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~-~q~ 435 (548)
T 1q3q_A 370 -------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGK-EAL 435 (548)
T ss_dssp -------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHH-HHH
T ss_pred -------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCc-HHH
Confidence 589999999999999999999999999999999999 99999999999999999998766554 579
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHH
Q 007981 481 GADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVV 556 (582)
Q Consensus 481 ~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~i 556 (582)
++++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.||+++|++|+++|++|
T Consensus 436 ~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 515 (548)
T 1q3q_A 436 AIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMI 515 (548)
T ss_dssp HHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999963 468999999999999999999999999999999999999999
Q ss_pred HChhHHhcCCCCCC
Q 007981 557 LTTEAVLADKIKQP 570 (582)
Q Consensus 557 L~iD~iI~~~~p~~ 570 (582)
||||++|... |++
T Consensus 516 L~iD~iI~~~-~~~ 528 (548)
T 1q3q_A 516 LRIDDVIAAK-ATK 528 (548)
T ss_dssp HTCCEEEECC-C--
T ss_pred HHHHHHHhcC-CcC
Confidence 9999999997 765
No 11
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=8.7e-102 Score=861.03 Aligned_cols=482 Identities=20% Similarity=0.291 Sum_probs=429.3
Q ss_pred ceecccccchhhHHhhcccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhccccc
Q 007981 32 KCLWRNQSRKMVAVVRAGPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSD 110 (582)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~h 110 (582)
-.+|+++|+|+++++++..+++.||.+||..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++|
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~h 98 (562)
T 3p9d_E 19 IVAQDEMGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDN 98 (562)
T ss_dssp -----------CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCS
T ss_pred hHHHHhcCCCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCC
Confidence 3489999999999999888999999999999999999999999999999999999999 999999999999999999999
Q ss_pred chhhHHhHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCCH---
Q 007981 111 TIENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTGR--- 187 (582)
Q Consensus 111 p~~~~~akLl~~~a~~qd~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~--- 187 (582)
|. |||++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|+++.
T Consensus 99 P~----Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~ 174 (562)
T 3p9d_E 99 EI----AKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDE 174 (562)
T ss_dssp HH----HHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCS
T ss_pred HH----HHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcch
Confidence 96 99999999999999999999999999999999999999999999999999999999999999999998632
Q ss_pred ---HHHHHHHHHhcCC------chhHHHHHHHHHHHhccC-------CcEEE--eCCCCcccceeeeeceEEecccCCcc
Q 007981 188 ---DDIKAVASISAGN------DEFIGNLIADAIIKIGAD-------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQ 249 (582)
Q Consensus 188 ---~~L~~va~ts~~~------~~~l~~li~~Av~~v~~~-------g~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~ 249 (582)
+.|.++|+||+++ .+.|+++++||+..+.+. +.|++ ..|++++|| ++++|++|+++|.|||
T Consensus 175 ~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~ 253 (562)
T 3p9d_E 175 LFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQ 253 (562)
T ss_dssp SCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTS
T ss_pred hhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCC
Confidence 6899999999876 378999999999998652 34554 579999999 9999999999999999
Q ss_pred ccccccccceeecceeEEEecccC-------------CCHHh-----------HHHHHHHHhcCCCCEEEEecCcchHHH
Q 007981 250 FITNQEKSLVEFDNAKVLITDQKI-------------STVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVL 305 (582)
Q Consensus 250 ~~~~~~~~~~~~~n~kIll~~~~i-------------~~~~e-----------l~~~le~i~~~~~~lVI~~~~i~~~al 305 (582)
|.++.. .+..++|++|+++++++ +++++ +.++++++.++|+|||||+++|+++|+
T Consensus 254 m~~~~~-~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al 332 (562)
T 3p9d_E 254 MPKCVL-PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEAN 332 (562)
T ss_dssp CCC------TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHH
T ss_pred cCcccc-cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHH
Confidence 754321 12223899999999874 34444 467899999999999999999999999
Q ss_pred HHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE-----ecccEEEEeCCCCh
Q 007981 306 ETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV-----KSNSTTIVADPYTK 379 (582)
Q Consensus 306 ~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~-----~~~~~~~~~~~~~~ 379 (582)
++|..|++ .+|+++ ++.+|+|||++|| +++++++++++++||+|+.|++ +++++++|++|+++
T Consensus 333 ~~L~~~~I------~~v~~v-----~k~~le~ia~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~ 401 (562)
T 3p9d_E 333 HLLLQNDL------PAVRWV-----GGQELEHIAISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET 401 (562)
T ss_dssp HHHHTTTC------CCEECC-----CTTTHHHHHHHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC
T ss_pred HHHHHCCC------EEEecc-----CHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC
Confidence 99999875 456544 5789999999999 9999999999999999999997 36899999999764
Q ss_pred HHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHH
Q 007981 380 AEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGAT 458 (582)
Q Consensus 380 ~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~ 458 (582)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++
T Consensus 402 -----------------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~ 446 (562)
T 3p9d_E 402 -----------------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAA 446 (562)
T ss_dssp -----------------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHH
T ss_pred -----------------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHH
Confidence 468999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc-----CCCcceeecCCCcccccccC
Q 007981 459 YVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-----SDWRFGYNAMTGRYEDLLSA 533 (582)
Q Consensus 459 e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~-----~~~~~Gid~~~g~i~d~~~~ 533 (582)
|++|+.+|++++.++++.+ ++++++|++||+.||++||+|||+|+.+++.+|++ .++++|||+.+|++.||++.
T Consensus 447 e~~~s~~L~~~~~~~~g~e-q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~ 525 (562)
T 3p9d_E 447 EVTMSLAVSEEADKQRGID-QYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKEL 525 (562)
T ss_dssp HHHHHHHHHHHHHTTCTTH-HHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTT
T ss_pred HHHHHHHHHHHhccCccHH-HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhc
Confidence 9999999999988777764 69999999999999999999999999999999986 25789999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHChhHHhcCC
Q 007981 534 GVADPCRVARCALQNAVSIAAVVLTTEAVLADK 566 (582)
Q Consensus 534 gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~ 566 (582)
|||||+.||+++|++|+++|++|||||++|+..
T Consensus 526 gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 558 (562)
T 3p9d_E 526 FVVDPFIGKKQQILLATQLCRMILKIDNVIISG 558 (562)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECC
T ss_pred cCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999876
No 12
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.2e-101 Score=857.38 Aligned_cols=464 Identities=21% Similarity=0.337 Sum_probs=430.1
Q ss_pred ccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
..+++.||.++|..|+.||+.|+++|+|||||+||+|||++ .|+++|||||+|||++|+++||. ||||+++|++|
T Consensus 15 ~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 90 (559)
T 3p9d_A 15 LGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQQ 90 (559)
T ss_dssp SSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHHH
Confidence 46899999999999999999999999999999999999999 99999999999999999999996 99999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHc-cCcccCC--HHHHHHHHHHhcCC----
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQ-KSFPVTG--RDDIKAVASISAGN---- 200 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~--~~~L~~va~ts~~~---- 200 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++ +++|++. .+.|.++|+||+++
T Consensus 91 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~ 170 (559)
T 3p9d_A 91 DREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIG 170 (559)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGG
T ss_pred HHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCccc
Confidence 9999999999999999999999999999999999999999999999999999 9999984 78999999999986
Q ss_pred --chhHHHHHHHHHHHhcc-----CCc-----EEE--eCCCCcccceeeeeceEEecccCCccccccccccceeec--ce
Q 007981 201 --DEFIGNLIADAIIKIGA-----DGV-----ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFD--NA 264 (582)
Q Consensus 201 --~~~l~~li~~Av~~v~~-----~g~-----I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~--n~ 264 (582)
+++|++|++||+.++++ ++. |++ ..|++++|+ ++++||+|+++|.||| |+++++ ||
T Consensus 171 ~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ie~~n~ 242 (559)
T 3p9d_A 171 ADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQA-------MPKRIAGGNV 242 (559)
T ss_dssp TTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTT-------SCSEECSSSB
T ss_pred chhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCC-------cceeeccCCc
Confidence 69999999999999984 244 333 359999998 9999999999999998 677899 99
Q ss_pred eEEEecccC-------------CCHHh-----------HHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEE
Q 007981 265 KVLITDQKI-------------STVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVA 320 (582)
Q Consensus 265 kIll~~~~i-------------~~~~e-----------l~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~ 320 (582)
||++++++| +++++ +.++++++.++|+|||||+++|+++|+++|..|++ +
T Consensus 243 kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I------~ 316 (559)
T 3p9d_A 243 KIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKI------M 316 (559)
T ss_dssp CEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTC------E
T ss_pred eEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCC------c
Confidence 999999987 34444 56789999999999999999999999999999874 6
Q ss_pred EEeCCCcCCCcHHHHHHHHHHhC-Cccccc------cCCCccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHH
Q 007981 321 VVKCPGFGDGKKALLQDIALMTG-ELGLTL------AGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIK 390 (582)
Q Consensus 321 aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l------~~l~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~ 390 (582)
|| +++++.+|+|||++|| ++++++ +++++++||+|+.|+ +++++|++|++|++
T Consensus 317 av-----~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------ 379 (559)
T 3p9d_A 317 GV-----RRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK------------ 379 (559)
T ss_dssp EE-----SSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS------------
T ss_pred eE-----ccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC------------
Confidence 66 4778999999999999 888887 789999999999998 58999999999875
Q ss_pred HHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhh
Q 007981 391 KDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPII 469 (582)
Q Consensus 391 ~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~ 469 (582)
+++|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|+++
T Consensus 380 -----------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~ 436 (559)
T 3p9d_A 380 -----------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNF 436 (559)
T ss_dssp -----------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHH
T ss_pred -----------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999 9999999999999999999
Q ss_pred hccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CC------------cceeecCCCcccccccC
Q 007981 470 KNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DW------------RFGYNAMTGRYEDLLSA 533 (582)
Q Consensus 470 ~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~------------~~Gid~~~g~i~d~~~~ 533 (582)
+.+.++. +++++++|++||+.||++||+|||+|+.+++.+|++. ++ ++|||+.+|++.||++.
T Consensus 437 ~~~~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~ 515 (559)
T 3p9d_A 437 ATTVGSR-EQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHA 515 (559)
T ss_dssp HTTSCTT-HHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTS
T ss_pred hcccChH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhc
Confidence 8877775 4699999999999999999999999999999999874 33 79999999999999999
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCC
Q 007981 534 GVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 572 (582)
Q Consensus 534 gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~ 572 (582)
|||||+.||+++|++|+++|++|||||++|+.. |+++.
T Consensus 516 gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~-~~~~~ 553 (559)
T 3p9d_A 516 GVLEPTISKVKSLKSALEACVAILRIDTMITVD-PEPPK 553 (559)
T ss_dssp SCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECC-CCCCC
T ss_pred cCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcC-Ccccc
Confidence 999999999999999999999999999999998 87653
No 13
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=4.4e-101 Score=853.23 Aligned_cols=459 Identities=25% Similarity=0.362 Sum_probs=424.6
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.++.||.++|..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. ||||+++|++||+
T Consensus 15 ~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~ 90 (545)
T 1a6d_A 15 TQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----AKMIVEVSKAQDT 90 (545)
T ss_dssp --CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----HHHHHGGGGCTTT
T ss_pred chhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----HHHHHHHHHhcCC
Confidence 568999999999999999999999999999999999999 99999999999999999999995 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC-CHHHHHHHHHHhcC------Cch
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-GRDDIKAVASISAG------NDE 202 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~~~L~~va~ts~~------~~~ 202 (582)
++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++++.| + +.+.|.++|+||++ +++
T Consensus 91 e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~ 169 (545)
T 1a6d_A 91 AVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSND 169 (545)
T ss_dssp CSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHH
T ss_pred EECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccHH
Confidence 999999999999999999999999999999999999999999999999999999 8 88999999998865 368
Q ss_pred hHHHHHHHHHHHhccC---------CcEEEe--CCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecc
Q 007981 203 FIGNLIADAIIKIGAD---------GVILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (582)
Q Consensus 203 ~l~~li~~Av~~v~~~---------g~I~i~--~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~ 271 (582)
+|++|++||+.+++++ +.|+++ +|++++|| ++++|++|+++|.||| |+++++||||+++|+
T Consensus 170 ~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~~ 241 (545)
T 1a6d_A 170 FLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSK-------MPDVVKNAKIALIDS 241 (545)
T ss_dssp HHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTT-------SCSEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCC-------CcceecCCEEEEEec
Confidence 9999999999999875 368876 99999999 9999999999999998 467899999999999
Q ss_pred c-------------CCCHHhH-----------HHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCc
Q 007981 272 K-------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (582)
Q Consensus 272 ~-------------i~~~~el-----------~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~ 327 (582)
+ |++++++ .++++++.++|+||||++++|+++|+++|..|+ |+||+
T Consensus 242 ~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~---- 311 (545)
T 1a6d_A 242 ALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR---- 311 (545)
T ss_dssp CBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC----
T ss_pred CCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec----
Confidence 9 6666665 678999999999999999999999999999986 37774
Q ss_pred CCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHH
Q 007981 328 GDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSR 403 (582)
Q Consensus 328 ~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~ 403 (582)
++++.+|+|||++|| +++++++++++++||+|+.|++ ++++|++|++|+++
T Consensus 312 -~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------------------------ 366 (545)
T 1a6d_A 312 -RVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNP------------------------ 366 (545)
T ss_dssp -SCCHHHHHHHHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCS------------------------
T ss_pred -cCCHHHHHHHHHHhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCCCC------------------------
Confidence 678999999999999 9999999999999999999987 47899999998753
Q ss_pred HHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHH
Q 007981 404 KLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGA 482 (582)
Q Consensus 404 ~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i 482 (582)
++|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.+.++. +++++
T Consensus 367 -----------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~-~q~~i 434 (545)
T 1a6d_A 367 -----------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGR-EQLAI 434 (545)
T ss_dssp -----------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHH-HHHHH
T ss_pred -----------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCcc-HHHHH
Confidence 589999999999999999999999999999999999 99999999999999999998776665 57999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHC
Q 007981 483 DIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLT 558 (582)
Q Consensus 483 ~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~ 558 (582)
++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.||+++|++|+++|++|||
T Consensus 435 ~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~ 514 (545)
T 1a6d_A 435 EAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILR 514 (545)
T ss_dssp HHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999963 35899999999999999999999999999999999999999999
Q ss_pred hhHHhcCCCCCC
Q 007981 559 TEAVLADKIKQP 570 (582)
Q Consensus 559 iD~iI~~~~p~~ 570 (582)
||++|... |++
T Consensus 515 id~iI~~~-~~~ 525 (545)
T 1a6d_A 515 IDDVIASK-KST 525 (545)
T ss_dssp CCEEC-------
T ss_pred HHHHHhcc-cCC
Confidence 99999997 765
No 14
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.7e-100 Score=839.75 Aligned_cols=460 Identities=20% Similarity=0.280 Sum_probs=424.1
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.++..|.+++..|+.||+.|+++|+|||||+||+|||++ .|+++|||||+|||++|+++||+ |||++++|++||+
T Consensus 4 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~ 79 (515)
T 3iyg_H 4 TDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQDA 79 (515)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhhc
Confidence 456779999999999999999999999999999999999 99999999999999999999997 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--C----HHHHHHHHHHhcC----
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--G----RDDIKAVASISAG---- 199 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~----~~~L~~va~ts~~---- 199 (582)
++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++++.|++ + ++.|.++|+||++
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~ 159 (515)
T 3iyg_H 80 EVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLI 159 (515)
T ss_pred eeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999985 5 5778999999875
Q ss_pred --CchhHHHHHHHHHHHhccC---CcEEEe--CCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc
Q 007981 200 --NDEFIGNLIADAIIKIGAD---GVILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK 272 (582)
Q Consensus 200 --~~~~l~~li~~Av~~v~~~---g~I~i~--~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~ 272 (582)
++++|++|++||+.+++.+ +.|+++ .|+++.|+ ++++||+|+++|.||||++ ||++++||||++++++
T Consensus 160 s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~----~p~~~en~kIll~~~~ 234 (515)
T 3iyg_H 160 SQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEM----QPKKYHNPMIALLNVE 234 (515)
T ss_pred cccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCccccc----CCccccccEEEEEccc
Confidence 4689999999999999876 777774 68899998 9999999999999999865 4568999999999996
Q ss_pred -------------CCCHHhH-----------HHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcC
Q 007981 273 -------------ISTVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFG 328 (582)
Q Consensus 273 -------------i~~~~el-----------~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~ 328 (582)
|++++++ .++++++.++|+||||++++|++.++++|..+ |+ +++ +
T Consensus 235 Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~---gI---~~v-----~ 303 (515)
T 3iyg_H 235 LELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR---DM---FCA-----G 303 (515)
T ss_pred ccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc---CC---ccc-----c
Confidence 5666665 56688999999999999999999999988654 33 443 6
Q ss_pred CCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHH
Q 007981 329 DGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRK 404 (582)
Q Consensus 329 ~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~ 404 (582)
++++.+|+|||++|| +++++++++++++||+|+.|++ +++++++|++|+++
T Consensus 304 ~~~k~~leria~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------------------- 358 (515)
T 3iyg_H 304 RVPEEDLKRTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA------------------------- 358 (515)
T ss_pred cccHHHHHHHHHHhCCEEeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC-------------------------
Confidence 778999999999999 9999999999999999999986 47899999999764
Q ss_pred HHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHH
Q 007981 405 LSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGAD 483 (582)
Q Consensus 405 l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~ 483 (582)
..|||+|||+|+.+++|+||++|||||++|++++++ +|||||++|++|+.+|++++.+.++.+ +++++
T Consensus 359 ----------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~e-q~~i~ 427 (515)
T 3iyg_H 359 ----------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQ-QLLIG 427 (515)
T ss_pred ----------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHH-HHHHH
Confidence 479999999999999999999999999999999995 999999999999999999988777765 68999
Q ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHCh
Q 007981 484 IVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTT 559 (582)
Q Consensus 484 ~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~i 559 (582)
+|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+++|++||||
T Consensus 428 ~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~i 507 (515)
T 3iyg_H 428 AYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSV 507 (515)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999884 457999999999999999999999999999999999999999999
Q ss_pred hHHhcCC
Q 007981 560 EAVLADK 566 (582)
Q Consensus 560 D~iI~~~ 566 (582)
|++|+..
T Consensus 508 D~ii~~~ 514 (515)
T 3iyg_H 508 DETIKNP 514 (515)
T ss_pred HHHhcCC
Confidence 9999753
No 15
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.6e-100 Score=842.94 Aligned_cols=457 Identities=24% Similarity=0.308 Sum_probs=421.6
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.++.+|.++|..|+.||+.|+++|||||||+||+|||++ .|+++|||||+|||++|+++||. |||++++|++||+
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~ 78 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQDK 78 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhhh
Confidence 467899999999999999999999999999999999999 99999999999999999999995 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHc-cCcccC--CHHHHHHHHHHhcC------C
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQ-KSFPVT--GRDDIKAVASISAG------N 200 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~~~L~~va~ts~~------~ 200 (582)
++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++ ++.+++ +++.|.++|+||++ +
T Consensus 79 e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~ 158 (529)
T 3iyg_A 79 EVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGIN 158 (529)
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCccccc
Confidence 99999999999999999999999999999999999999999999999998 999988 78999999999986 3
Q ss_pred chhHHHHHHHHHHHhc---cCC-----c--EEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEE
Q 007981 201 DEFIGNLIADAIIKIG---ADG-----V--ILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLI 268 (582)
Q Consensus 201 ~~~l~~li~~Av~~v~---~~g-----~--I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll 268 (582)
+++|++|++||+.+++ ++| . |++ ..|+++.|| ++++|++|+++|.||+ |+++++||||++
T Consensus 159 ~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll 230 (529)
T 3iyg_A 159 GDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQG-------MPKRIVNAKIAC 230 (529)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCccccc-------CCcccCCceEEE
Confidence 6899999999999997 343 2 555 589999998 9999999999999997 677899999999
Q ss_pred ecccCC-------------CHHh-----------HHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeC
Q 007981 269 TDQKIS-------------TVKE-----------IVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKC 324 (582)
Q Consensus 269 ~~~~i~-------------~~~e-----------l~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~ 324 (582)
++++++ ++++ +.++++++.++|+|||||+++|+++|+++|..|+ |+|||
T Consensus 231 l~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~- 303 (529)
T 3iyg_A 231 LDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVR- 303 (529)
T ss_pred ecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Cceec-
Confidence 999753 3333 4567889999999999999999999999999985 47776
Q ss_pred CCcCCCcHHHHHHHHHHhC-CccccccCC------CccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHHHh
Q 007981 325 PGFGDGKKALLQDIALMTG-ELGLTLAGA------TSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLA 394 (582)
Q Consensus 325 ~~~~~~~~~~Le~ia~~tG-~i~~~l~~l------~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~ 394 (582)
++++.+|+|||++|| +++++++++ ++++||+|+.|+ ++++++++|++|+++
T Consensus 304 ----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~--------------- 364 (529)
T 3iyg_A 304 ----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR--------------- 364 (529)
T ss_pred ----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC---------------
Confidence 567999999999999 888877665 468899999998 689999999999764
Q ss_pred hhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccC
Q 007981 395 ATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSM 473 (582)
Q Consensus 395 ~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~ 473 (582)
+.|||+|||+|+.+++|.||++|||||++|+++++| +||||||+|++|+.+|++++.++
T Consensus 365 --------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~ 424 (529)
T 3iyg_A 365 --------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSM 424 (529)
T ss_pred --------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhc
Confidence 479999999999999999999999999999999999 99999999999999999999888
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----C--------CcceeecCCCcccccccCcccccHHH
Q 007981 474 EDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----D--------WRFGYNAMTGRYEDLLSAGVADPCRV 541 (582)
Q Consensus 474 ~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~--------~~~Gid~~~g~i~d~~~~gI~Dp~~v 541 (582)
++.+ |+++++|++||+.||++||+|||+|+.+++.+|++. + .++|||+.+|++.||++.|||||+.|
T Consensus 425 ~g~e-q~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~v 503 (529)
T 3iyg_A 425 GSRE-QLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIV 503 (529)
T ss_pred CChH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHH
Confidence 7765 589999999999999999999999999999999874 2 57999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHChhHHhcCC
Q 007981 542 ARCALQNAVSIAAVVLTTEAVLADK 566 (582)
Q Consensus 542 k~~~l~~A~e~a~~iL~iD~iI~~~ 566 (582)
|+++|++|+|+|++|||||++|...
T Consensus 504 k~~al~~A~e~a~~iL~iD~ii~~~ 528 (529)
T 3iyg_A 504 KVKSLKFATEAAITILRIDDLIKLH 528 (529)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhcCC
Confidence 9999999999999999999999875
No 16
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=3.7e-101 Score=850.88 Aligned_cols=463 Identities=20% Similarity=0.283 Sum_probs=427.5
Q ss_pred ccchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 49 GPKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 49 ~~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
..+++.||.++|..|+.||+.|+++|+|||||+||+|||++ .|+++|||||+||||+|+++||+ |+|++++|++|
T Consensus 10 ~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~q 85 (528)
T 3p9d_D 10 TFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAAQ 85 (528)
T ss_dssp SSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHHH
T ss_pred ccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHHh
Confidence 35788999999999999999999999999999999999999 99999999999999999999997 99999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCC-----
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGN----- 200 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~----- 200 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++++.|++ +.+.|.++|+||+++
T Consensus 86 d~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~ 165 (528)
T 3p9d_D 86 DSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQ 165 (528)
T ss_dssp HHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCST
T ss_pred hhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccch
Confidence 9999999999999999999999999999999999999999999999999999999998 789999999999976
Q ss_pred -chhHHHHHHHHHHHhcc--CCcEEE-------eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEec
Q 007981 201 -DEFIGNLIADAIIKIGA--DGVILI-------ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (582)
Q Consensus 201 -~~~l~~li~~Av~~v~~--~g~I~i-------~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~ 270 (582)
+++|++|++||+.++++ +|.|.+ ..|++++|+ ++++|++|+++|.||+| |+++++||||++++
T Consensus 166 ~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~ 238 (528)
T 3p9d_D 166 YSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQ 238 (528)
T ss_dssp THHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEEC
T ss_pred hHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEEe
Confidence 58999999999999987 454433 359999998 99999999999999986 88999999999999
Q ss_pred ccCC-------------CHHh-----------HHHHHHHHhcCCCCEEEEecCc-----chHHHHHHHHhhhccceeEEE
Q 007981 271 QKIS-------------TVKE-----------IVPLLEKTTQLSVPLLIIAEDI-----SSQVLETLVMNKIRGLLNVAV 321 (582)
Q Consensus 271 ~~i~-------------~~~e-----------l~~~le~i~~~~~~lVI~~~~i-----~~~al~~L~~n~l~g~~~v~a 321 (582)
++|+ ++++ +.++++++.++|+||||++++| +++++++|..|+ |+|
T Consensus 239 ~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~a 312 (528)
T 3p9d_D 239 FQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IMV 312 (528)
T ss_dssp CCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CCE
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cEE
Confidence 9876 3433 5678999999999999999999 999999998775 478
Q ss_pred EeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhc
Q 007981 322 VKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATD 397 (582)
Q Consensus 322 Vk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~ 397 (582)
|| ++++.+|+|||++|| +++++++++++++||+|+.|++ +++++++|++|....
T Consensus 313 v~-----~~~k~~le~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~----------------- 370 (528)
T 3p9d_D 313 VK-----DIEREEIEFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN----------------- 370 (528)
T ss_dssp EE-----CCCTHHHHHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-----------------
T ss_pred EE-----eCCHHHHHHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-----------------
Confidence 76 456899999999999 9999999999999999999984 567889999875210
Q ss_pred hHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCCh
Q 007981 398 NAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDP 476 (582)
Q Consensus 398 ~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~ 476 (582)
.+++|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.+.++.
T Consensus 371 ---------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~ 435 (528)
T 3p9d_D 371 ---------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGV 435 (528)
T ss_dssp ---------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHH
T ss_pred ---------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChH
Confidence 14689999999999999999999999999999999999 99999999999999999998776665
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHH
Q 007981 477 DEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSI 552 (582)
Q Consensus 477 eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~ 552 (582)
+++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+++
T Consensus 436 -eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~ 514 (528)
T 3p9d_D 436 -QAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASEC 514 (528)
T ss_dssp -HHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999999999884 47899999999999999999999999999999999999
Q ss_pred HHHHHChhHHhcCC
Q 007981 553 AAVVLTTEAVLADK 566 (582)
Q Consensus 553 a~~iL~iD~iI~~~ 566 (582)
|++|||||+||+.+
T Consensus 515 a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 515 VKSILRIDDIAFSR 528 (528)
T ss_dssp HHHHHHCSCCCBCC
T ss_pred HHHHHhhhHheecC
Confidence 99999999998753
No 17
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.2e-99 Score=835.59 Aligned_cols=457 Identities=19% Similarity=0.303 Sum_probs=421.4
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
.+++.||.++|..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |||++++|++||
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~qd 77 (515)
T 3iyg_E 2 RKSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQD 77 (515)
T ss_pred cchhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHhh
Confidence 4578899999999999999999999999999999999999 99999999999999999999996 999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCC----HHHHHHHHHHhcCC----
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG----RDDIKAVASISAGN---- 200 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~----~~~L~~va~ts~~~---- 200 (582)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++++.|++. ++.|.++|+||+++
T Consensus 78 ~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~ 157 (515)
T 3iyg_E 78 DEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVN 157 (515)
T ss_pred hhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchh
Confidence 9999999999999999999999999999999999999999999999999999998853 68999999999986
Q ss_pred --chhHHHHHHHHHHHhccC-------CcEEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEe
Q 007981 201 --DEFIGNLIADAIIKIGAD-------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLIT 269 (582)
Q Consensus 201 --~~~l~~li~~Av~~v~~~-------g~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~ 269 (582)
.+.|+++++||+..+.+. +.|++ ..|+++.|+ ++++||+|+++|.||| |++.++||+|+++
T Consensus 158 ~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~-------m~~~~~~~kIall 229 (515)
T 3iyg_E 158 SCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQ-------MPKQVEDAKIAIL 229 (515)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEeccccccc-------ccccCCCceEEEE
Confidence 378999999999998652 34555 479999998 9999999999999998 5567889999999
Q ss_pred cccC-------------CCHHhH-----------HHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCC
Q 007981 270 DQKI-------------STVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (582)
Q Consensus 270 ~~~i-------------~~~~el-----------~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~ 325 (582)
++++ ++++++ .++++++.++|+||||++++|+++|+++|..|++ .+|+++
T Consensus 230 ~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I------~~v~~v 303 (515)
T 3iyg_E 230 TCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDL------PAVRWV 303 (515)
T ss_pred cCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCC------EEEecc
Confidence 8874 455555 5688999999999999999999999999999875 566654
Q ss_pred CcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE-----ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchH
Q 007981 326 GFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV-----KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNA 399 (582)
Q Consensus 326 ~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~-----~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~ 399 (582)
++.+|+|||++|| +++++++++++++||+|+.|++ +++++++|++|+++
T Consensus 304 -----~k~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~-------------------- 358 (515)
T 3iyg_E 304 -----GGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS-------------------- 358 (515)
T ss_pred -----CHHHHHHHHHHhCCEEecccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC--------------------
Confidence 4899999999999 9999999999999999999987 45899999999764
Q ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhh
Q 007981 400 YLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDE 478 (582)
Q Consensus 400 ~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq 478 (582)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.++++.+
T Consensus 359 ---------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~- 422 (515)
T 3iyg_E 359 ---------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLE- 422 (515)
T ss_pred ---------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHH-
Confidence 368999999999999999999999999999999999 999999999999999999988777764
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc-----CCCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHH
Q 007981 479 QIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT-----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIA 553 (582)
Q Consensus 479 ~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~-----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a 553 (582)
++++++|++||+.||++||+|||+|+.+++.+|++ .++++|||+.+|++.||++.|||||+.||+++|++|+++|
T Consensus 423 q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a 502 (515)
T 3iyg_E 423 QYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMV 502 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999986 2468999999999999999999999999999999999999
Q ss_pred HHHHChhHHhcC
Q 007981 554 AVVLTTEAVLAD 565 (582)
Q Consensus 554 ~~iL~iD~iI~~ 565 (582)
++|||||++|+.
T Consensus 503 ~~iL~iD~ii~~ 514 (515)
T 3iyg_E 503 RMILKIDDIRKP 514 (515)
T ss_pred HHHHhHHHhhcC
Confidence 999999999964
No 18
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.4e-99 Score=837.17 Aligned_cols=457 Identities=21% Similarity=0.298 Sum_probs=422.9
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
++..+|.++|..|+.||+.|+++|+|||||+||+|||++ .|+++|||||+|||++|+++||+ |||++++|++||+
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~ 79 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQDI 79 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhhh
Confidence 456789999999999999999999999999999999999 99999999999999999999996 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCCc------
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGND------ 201 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~~------ 201 (582)
++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++++.|++ +.+.|.++|+||++++
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~ 159 (518)
T 3iyg_D 80 EAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYS 159 (518)
T ss_pred hhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhH
Confidence 99999999999999999999999999999999999999999999999999999998 7899999999999885
Q ss_pred hhHHHHHHHHHHHhcc---CCc-----EEEe--CCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecc
Q 007981 202 EFIGNLIADAIIKIGA---DGV-----ILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (582)
Q Consensus 202 ~~l~~li~~Av~~v~~---~g~-----I~i~--~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~ 271 (582)
++|++|++||+.++++ +|. |+++ .|+++.|+ ++++||+|+++|.| + ||..++||||+++++
T Consensus 160 ~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~ 230 (518)
T 3iyg_D 160 SLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQF 230 (518)
T ss_pred HHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEEe
Confidence 8999999999999985 554 6664 78999998 99999999999998 3 667889999999998
Q ss_pred cCC-------------CHH-----------hHHHHHHHHhcCCCCEEEE-----ecCcchHHHHHHHHhhhccceeEEEE
Q 007981 272 KIS-------------TVK-----------EIVPLLEKTTQLSVPLLII-----AEDISSQVLETLVMNKIRGLLNVAVV 322 (582)
Q Consensus 272 ~i~-------------~~~-----------el~~~le~i~~~~~~lVI~-----~~~i~~~al~~L~~n~l~g~~~v~aV 322 (582)
+++ +++ .+.++++++.++|+||||| +++|+++|+++|..|+ |+||
T Consensus 231 ~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~------I~av 304 (518)
T 3iyg_D 231 CLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMK------IMVV 304 (518)
T ss_pred eccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcC------cEEE
Confidence 853 343 3567889999999999999 8999999999999875 5899
Q ss_pred eCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ec-ccEEEEeCCCChHHHHHHHHHHHHHHhhhc
Q 007981 323 KCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KS-NSTTIVADPYTKAEIQARIMQIKKDLAATD 397 (582)
Q Consensus 323 k~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~-~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~ 397 (582)
|+|+ +.+|+|||++|| +++++++++++++||+|+.|++ ++ +++++|++|++
T Consensus 305 ~~~~-----~~~le~ia~~tGa~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~------------------- 360 (518)
T 3iyg_D 305 KDIE-----REDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS------------------- 360 (518)
T ss_pred ecCC-----HHHHHHHHHHhCCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC-------------------
Confidence 9887 478999999999 9999999999999999999986 44 68899999864
Q ss_pred hHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCCh
Q 007981 398 NAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDP 476 (582)
Q Consensus 398 ~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~ 476 (582)
++++|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.+.++.
T Consensus 361 ---------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~ 425 (518)
T 3iyg_D 361 ---------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGM 425 (518)
T ss_pred ---------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChH
Confidence 14689999999999999999999999999999999999 99999999999999999998877776
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc----CCCcceeecCCCcccccccCcccccHHHHHHHHHHHHHH
Q 007981 477 DEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT----SDWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSI 552 (582)
Q Consensus 477 eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~----~~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~ 552 (582)
+++++++|++||+.||++||+|||+|+.+++.+|++ +++++|||+.+|++.||++.|||||+.||+++|++|+++
T Consensus 426 -~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~ 504 (518)
T 3iyg_D 426 -ESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATET 504 (518)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999988 356899999999999999999999999999999999999
Q ss_pred HHHHHChhHHhcCC
Q 007981 553 AAVVLTTEAVLADK 566 (582)
Q Consensus 553 a~~iL~iD~iI~~~ 566 (582)
|++|||||+||+.+
T Consensus 505 a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 505 VRSILKIDDVVNTR 518 (518)
T ss_pred HHHHHhhcceEecC
Confidence 99999999999753
No 19
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=6e-101 Score=852.36 Aligned_cols=467 Identities=20% Similarity=0.282 Sum_probs=424.7
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
..++.+|.+++..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||. |||++++|++||
T Consensus 16 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd 91 (550)
T 3p9d_G 16 GTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTLVDISRAQD 91 (550)
T ss_dssp CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHHHHHHHHHH
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhh
Confidence 3577899999999999999999999999999999999999 99999999999999999999995 999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccCC-----HHHHHHHHHHhcC----
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAG---- 199 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~L~~va~ts~~---- 199 (582)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++. .+.|.++|+||++
T Consensus 92 ~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~ 171 (550)
T 3p9d_G 92 AEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLI 171 (550)
T ss_dssp TTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTT
T ss_pred hhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccc
Confidence 9999999999999999999999999999999999999999999999999999999863 6789999999875
Q ss_pred --CchhHHHHHHHHHHHhcc-C------CcEEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEec
Q 007981 200 --NDEFIGNLIADAIIKIGA-D------GVILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (582)
Q Consensus 200 --~~~~l~~li~~Av~~v~~-~------g~I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~ 270 (582)
++++|++|++||+.++++ + +++++ +|++++|| ++++|++|+++|.||||.+ |+++++||||+++|
T Consensus 172 ~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll~~ 245 (550)
T 3p9d_G 172 HNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PGGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILSLN 245 (550)
T ss_dssp GGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CSSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEEEC
T ss_pred cccHhHHHHHHHHHHHHhCccccCchheeEEEe-cCCCccce-eEEeeEEEecccccccccc----CcccccCceEEEec
Confidence 368999999999999984 3 44444 59999999 9999999999999999965 66679999999999
Q ss_pred ccC-------------CCHHhHH-----------HHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCC
Q 007981 271 QKI-------------STVKEIV-----------PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (582)
Q Consensus 271 ~~i-------------~~~~el~-----------~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~ 326 (582)
++| ++++++. ++++++.++|++|||++++|++.++++|..+. ++++
T Consensus 246 ~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~g------I~~v---- 315 (550)
T 3p9d_G 246 VELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRN------IFCA---- 315 (550)
T ss_dssp SCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGT------CEEE----
T ss_pred cccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcC------Cccc----
Confidence 984 5555554 36788999999999999999999999887543 3454
Q ss_pred cCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHH
Q 007981 327 FGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLS 402 (582)
Q Consensus 327 ~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~ 402 (582)
+++++.+|+|||++|| +++++++++++++||+|+.|++ +++++++|+||+++
T Consensus 316 -~~v~k~~lerIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~----------------------- 371 (550)
T 3p9d_G 316 -GRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA----------------------- 371 (550)
T ss_dssp -ECCCTTHHHHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC-----------------------
T ss_pred -cCcCHHHHHHHHHHhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC-----------------------
Confidence 5677899999999999 9999999999999999999986 68899999998753
Q ss_pred HHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHH
Q 007981 403 RKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIG 481 (582)
Q Consensus 403 ~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~ 481 (582)
+.|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.++++.+ +++
T Consensus 372 ------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~e-q~~ 438 (550)
T 3p9d_G 372 ------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQ-QMI 438 (550)
T ss_dssp ------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTT-HHH
T ss_pred ------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHH-HHH
Confidence 579999999999999999999999999999999999 999999999999999999988777765 689
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHH
Q 007981 482 ADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVL 557 (582)
Q Consensus 482 i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL 557 (582)
+++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+++|++||
T Consensus 439 i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL 518 (550)
T 3p9d_G 439 INAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLIL 518 (550)
T ss_dssp HHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999873 5689999999999999999999999999999999999999999
Q ss_pred ChhHHhcCCCCCCCCCC
Q 007981 558 TTEAVLADKIKQPKPAV 574 (582)
Q Consensus 558 ~iD~iI~~~~p~~~~~~ 574 (582)
|||++|... |+++.+.
T Consensus 519 ~id~ii~~~-~~~~~~~ 534 (550)
T 3p9d_G 519 SVDETITNK-GSESANA 534 (550)
T ss_dssp TEEEEECCC-CCC----
T ss_pred hHHHHhhCC-CcccccC
Confidence 999999998 8765543
No 20
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.2e-100 Score=847.88 Aligned_cols=465 Identities=20% Similarity=0.305 Sum_probs=423.9
Q ss_pred cchhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec--CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhh
Q 007981 50 PKKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE--SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKM 127 (582)
Q Consensus 50 ~~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~--~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~q 127 (582)
.+++.||.++|.+|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++|| +|||++++|++|
T Consensus 9 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP----~Akll~e~a~~q 84 (527)
T 3p9d_B 9 QVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNP----AAKVLVNISKVQ 84 (527)
T ss_dssp CEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCH----HHHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCH----HHHHHHHHHHHh
Confidence 5788999999999999999999999999999999999998 7999999999999999999999 599999999999
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHhhhhC-CCChHHHHHHHHHHHHHHHHHHHccCcccCC-----HHHHHHHHHHhcCC-
Q 007981 128 NDLAGDGTTTAVILAREMIKSGMLSVSF-GANPVALKKGMHKTVKELVKVLKQKSFPVTG-----RDDIKAVASISAGN- 200 (582)
Q Consensus 128 d~e~GDGTTtvvvLa~~Ll~~~~~li~~-Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~L~~va~ts~~~- 200 (582)
|+++||||||+||||++||+++.+++.+ |+||+.|++||++|++.+++.|+++++++++ ++.|.++|+||+++
T Consensus 85 d~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK 164 (527)
T 3p9d_B 85 DDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSK 164 (527)
T ss_dssp HHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred HhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccC
Confidence 9999999999999999999999999999 9999999999999999999999999999985 78999999999987
Q ss_pred -----chhHHHHHHHHHHHhccCC---cEEEe--CCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEec
Q 007981 201 -----DEFIGNLIADAIIKIGADG---VILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (582)
Q Consensus 201 -----~~~l~~li~~Av~~v~~~g---~I~i~--~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~ 270 (582)
+++|++|++||+.++++++ .|+++ .|+++.|+ ++++||+||++|.||| |+.++||||++++
T Consensus 165 ~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~--------p~~~~n~kIlll~ 235 (527)
T 3p9d_B 165 ILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ--------PKRIENAKILIAN 235 (527)
T ss_dssp GGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC--------CSCCSSCEEEEEC
T ss_pred cccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC--------CeeeecceEEEec
Confidence 6899999999999999887 67775 69999998 9999999999999996 3467899999999
Q ss_pred ccC--------------CCHHhH-----------HHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCC
Q 007981 271 QKI--------------STVKEI-----------VPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCP 325 (582)
Q Consensus 271 ~~i--------------~~~~el-----------~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~ 325 (582)
+++ ++++++ .++++++.++|+||||++++|+++++++|..|+ ++||+++
T Consensus 236 ~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~~ 309 (527)
T 3p9d_B 236 TTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIEHA 309 (527)
T ss_dssp SCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCCC
T ss_pred cccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEecC
Confidence 874 344444 467889999999999999999999999999885 4777765
Q ss_pred CcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHH
Q 007981 326 GFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYL 401 (582)
Q Consensus 326 ~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e 401 (582)
+ +.+|+|||++|| +++.+++++++++||+|+.|+ ++++++++|++|++
T Consensus 310 ~-----~~dle~ia~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------------- 361 (527)
T 3p9d_B 310 D-----FEGVERLALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA----------------------- 361 (527)
T ss_dssp H-----HHHHHHHHHHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC-----------------------
T ss_pred C-----HHHHHHHHHHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCCC-----------------------
Confidence 5 678999999999 999999999999999999998 47899999999864
Q ss_pred HHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHH
Q 007981 402 SRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQI 480 (582)
Q Consensus 402 ~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~ 480 (582)
+++|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.++++. +++
T Consensus 362 ------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~-eq~ 428 (527)
T 3p9d_B 362 ------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGK-KSL 428 (527)
T ss_dssp ------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSH-HHH
T ss_pred ------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcH-HHH
Confidence 3689999999999999999999999999999999999 99999999999999999998766665 569
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHH
Q 007981 481 GADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVV 556 (582)
Q Consensus 481 ~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~i 556 (582)
++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+++|++|
T Consensus 429 ~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~i 508 (527)
T 3p9d_B 429 AVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVL 508 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999874 568999999999999999999999999999999999999999
Q ss_pred HChhHHhcCCCCCCCCCCC
Q 007981 557 LTTEAVLADKIKQPKPAVP 575 (582)
Q Consensus 557 L~iD~iI~~~~p~~~~~~~ 575 (582)
||||++|..+ |+++.++|
T Consensus 509 L~id~ii~~~-~~~~~~~~ 526 (527)
T 3p9d_B 509 LRVDNIIRAR-PRTANRQH 526 (527)
T ss_dssp HHCCEEEEEC---------
T ss_pred HhHHHHHhcC-CcccCCCC
Confidence 9999999998 88766554
No 21
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.5e-98 Score=826.63 Aligned_cols=456 Identities=21% Similarity=0.306 Sum_probs=419.7
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007981 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (582)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e 130 (582)
++..|.+++..|+.||+.|+++|||||||+||+|||++ .|+++|||||+|||++|+++||+ ||||+++|++||++
T Consensus 3 ~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e 78 (515)
T 3iyg_G 3 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEE 78 (515)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhh
Confidence 46678999999999999999999999999999999999 99999999999999999999997 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcCCc------h
Q 007981 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAGND------E 202 (582)
Q Consensus 131 ~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~~~------~ 202 (582)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++.|++ +.+.|.++|+||++++ +
T Consensus 79 ~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~ 158 (515)
T 3iyg_G 79 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSS 158 (515)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHH
Confidence 9999999999999999999999999999999999999999999999999999987 4789999999998753 5
Q ss_pred hHHHHHHHHHHHhccC--C--------cEEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEec
Q 007981 203 FIGNLIADAIIKIGAD--G--------VILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (582)
Q Consensus 203 ~l~~li~~Av~~v~~~--g--------~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~ 270 (582)
.++++++||+..+.++ + .|++ .+|++++|+ ++++|++|+++|.||+ |+++++||||++++
T Consensus 159 ~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~ 230 (515)
T 3iyg_G 159 LACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLD 230 (515)
T ss_pred HHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEc
Confidence 6788999999988632 2 1444 489999998 9999999999999995 78899999999999
Q ss_pred cc-------------CCCHHhHHHHHH-----------HHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCC
Q 007981 271 QK-------------ISTVKEIVPLLE-----------KTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPG 326 (582)
Q Consensus 271 ~~-------------i~~~~el~~~le-----------~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~ 326 (582)
++ |++++++.++++ ++.+.|++|||++++|++.++++|..++ |+||
T Consensus 231 ~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~------I~av---- 300 (515)
T 3iyg_G 231 SSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRAN------ITAI---- 300 (515)
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCC------ceee----
Confidence 94 567777776665 8899999999999999999999998753 4665
Q ss_pred cCCCcHHHHHHHHHHhC-CccccccCCCccccce-eeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHH
Q 007981 327 FGDGKKALLQDIALMTG-ELGLTLAGATSDQLGI-ARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYL 401 (582)
Q Consensus 327 ~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~-~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e 401 (582)
+++++.+|+|||++|| +++++++++++++||+ |+.|++ +++++++|+||+++
T Consensus 301 -~~~~k~~leria~~tGa~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~---------------------- 357 (515)
T 3iyg_G 301 -RRVRKTDNNRIARACGARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP---------------------- 357 (515)
T ss_pred -ccCCHHHHHHHHHHhCCeeeccccccChhhcCCcccEEEEEEECCceEEEEeCCCCC----------------------
Confidence 6778999999999999 9999999999999999 999985 56789999999865
Q ss_pred HHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHH
Q 007981 402 SRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQI 480 (582)
Q Consensus 402 ~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~ 480 (582)
..|||+|||+|+.+++|+||++|||||++|++++++ +|||||++|++|+.+|++++.++++.+ ++
T Consensus 358 -------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~e-q~ 423 (515)
T 3iyg_G 358 -------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVE-QW 423 (515)
T ss_pred -------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHH-HH
Confidence 479999999999999999999999999999999776 999999999999999999988887765 68
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC-----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHH
Q 007981 481 GADIVAKALIVPAISIATNAGVDGTIVVEKTRTS-----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAV 555 (582)
Q Consensus 481 ~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~-----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~ 555 (582)
++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+++|++
T Consensus 424 ~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~ 503 (515)
T 3iyg_G 424 PYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVL 503 (515)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999874 35799999999999999999999999999999999999999
Q ss_pred HHChhHHhcCC
Q 007981 556 VLTTEAVLADK 566 (582)
Q Consensus 556 iL~iD~iI~~~ 566 (582)
|||||++|...
T Consensus 504 iL~iD~ii~~~ 514 (515)
T 3iyg_G 504 LLRIDDIVSGH 514 (515)
T ss_pred HHHHHheeecC
Confidence 99999999764
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.4e-98 Score=822.83 Aligned_cols=456 Identities=20% Similarity=0.286 Sum_probs=416.9
Q ss_pred chhccc-HHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhh
Q 007981 51 KKILFG-KESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMN 128 (582)
Q Consensus 51 ~~~~~g-~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd 128 (582)
..+..| .+++..|+.||+.|+++|+|||||+||+|||++ .|+|+|||||+||||+|+++||+ |||++++|++||
T Consensus 3 ~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 78 (512)
T 3iyg_Q 3 AKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQE 78 (512)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHhh
Confidence 345678 799999999999999999999999999999999 99999999999999999999997 999999999999
Q ss_pred hhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHcc----CcccCCHHHHHHHHHHhcCC----
Q 007981 129 DLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQK----SFPVTGRDDIKAVASISAGN---- 200 (582)
Q Consensus 129 ~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~----s~~v~~~~~L~~va~ts~~~---- 200 (582)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++ +.++++++.|.++|+||+++
T Consensus 79 ~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~ 158 (512)
T 3iyg_Q 79 QEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYG 158 (512)
T ss_pred hhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999999999999999999999999999999999999998 56777899999999999987
Q ss_pred -chhHHHHHHHHHHHhccC-CcEEE-------eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecc
Q 007981 201 -DEFIGNLIADAIIKIGAD-GVILI-------ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQ 271 (582)
Q Consensus 201 -~~~l~~li~~Av~~v~~~-g~I~i-------~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~ 271 (582)
+++|++|++||+.+++++ +.|.+ ..|+++.|+ ++++||+|+++|.| |++.++||+|+++++
T Consensus 159 ~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~~ 228 (512)
T 3iyg_Q 159 NEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYSC 228 (512)
T ss_pred chHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEec
Confidence 789999999999999886 44433 369999888 99999999999876 456788999999998
Q ss_pred cC-------------CCHHhHHHH-------HH----HHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCc
Q 007981 272 KI-------------STVKEIVPL-------LE----KTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGF 327 (582)
Q Consensus 272 ~i-------------~~~~el~~~-------le----~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~ 327 (582)
++ ++++++.++ ++ ++.++|+||||++++|++.++++|..+ +|+|||+++
T Consensus 229 ~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~- 301 (512)
T 3iyg_Q 229 PFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNS- 301 (512)
T ss_pred ccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCC-
Confidence 74 556676654 44 889999999999999999999988653 479999887
Q ss_pred CCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHH
Q 007981 328 GDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSR 403 (582)
Q Consensus 328 ~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~ 403 (582)
+.+|+|||++|| +++++++++++++||+|+.|++ +++++++|++|+.
T Consensus 302 ----~~dle~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~------------------------- 352 (512)
T 3iyg_Q 302 ----KWDLRRLCKTVGATALPRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE------------------------- 352 (512)
T ss_pred ----HHHHHHHHHHhCCEEecccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC-------------------------
Confidence 467999999999 8999999999999999999986 4668999998743
Q ss_pred HHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHH
Q 007981 404 KLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGA 482 (582)
Q Consensus 404 ~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i 482 (582)
++++|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.++++.+ ++++
T Consensus 353 ---------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~e-q~~i 422 (512)
T 3iyg_Q 353 ---------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLE-QYAI 422 (512)
T ss_pred ---------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHH-HHHH
Confidence 25789999999999999999999999999999999999 999999999999999999988777765 6999
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCC--cccccccCcccccHHHHHHHHHHHHHHHHHH
Q 007981 483 DIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTG--RYEDLLSAGVADPCRVARCALQNAVSIAAVV 556 (582)
Q Consensus 483 ~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g--~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~i 556 (582)
++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+| ++.||++.|||||+.||+++|++|+++|++|
T Consensus 423 ~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~i 502 (512)
T 3iyg_Q 423 KKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTV 502 (512)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999873 67899999965 9999999999999999999999999999999
Q ss_pred HChhHHhcCC
Q 007981 557 LTTEAVLADK 566 (582)
Q Consensus 557 L~iD~iI~~~ 566 (582)
||||++|+.+
T Consensus 503 L~id~ii~~k 512 (512)
T 3iyg_Q 503 LRVDQIIMAK 512 (512)
T ss_pred HhHhHheecC
Confidence 9999999753
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.8e-97 Score=818.07 Aligned_cols=454 Identities=22% Similarity=0.329 Sum_probs=412.0
Q ss_pred hhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhh
Q 007981 52 KILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDL 130 (582)
Q Consensus 52 ~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e 130 (582)
++..|.+++..|+.||+.|+++|||||||+||+|||++ .|+++|||||+|||++|+++||. |||++++|++||++
T Consensus 4 ~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~e 79 (517)
T 3iyg_Z 4 EVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDDI 79 (517)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHHH
Confidence 46688999999999999999999999999999999999 99999999999999999999995 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC-CHHHHHHHHHHhcCC------chh
Q 007981 131 AGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT-GRDDIKAVASISAGN------DEF 203 (582)
Q Consensus 131 ~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~~~L~~va~ts~~~------~~~ 203 (582)
+||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++++.|++ +.+.|.++|+||+++ .+.
T Consensus 80 ~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~ 159 (517)
T 3iyg_Z 80 TGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADV 159 (517)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 889999999999876 378
Q ss_pred HHHHHHHHHHHhccCC------c--EEEeCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEecccCC-
Q 007981 204 IGNLIADAIIKIGADG------V--ILIESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIS- 274 (582)
Q Consensus 204 l~~li~~Av~~v~~~g------~--I~i~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~- 274 (582)
|+++++||+..+.+++ . |....|++..|+ ++++||+|+++|.||+ |+++++||||++++++++
T Consensus 160 la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~ 231 (517)
T 3iyg_Z 160 LTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEY 231 (517)
T ss_pred HHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEecccccc
Confidence 9999999998886532 2 333689999998 9999999999999997 788999999999999864
Q ss_pred ------------CHHhHH-----------HHHHHHhcCCCC---------EEEEecCcchHHHHHHHHhhhccceeEEEE
Q 007981 275 ------------TVKEIV-----------PLLEKTTQLSVP---------LLIIAEDISSQVLETLVMNKIRGLLNVAVV 322 (582)
Q Consensus 275 ------------~~~el~-----------~~le~i~~~~~~---------lVI~~~~i~~~al~~L~~n~l~g~~~v~aV 322 (582)
+++++. ..++.+...+.+ |||++++|+++++++|..+. +++|
T Consensus 232 ~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~g------I~~v 305 (517)
T 3iyg_Z 232 EKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEG------IIAL 305 (517)
T ss_pred cccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCC------CEEE
Confidence 333332 345555555444 46778999999999998864 3677
Q ss_pred eCCCcCCCcHHHHHHHHHHhC-CccccccCCCccc-cceeeEE---EEecccEEEEeCCCChHHHHHHHHHHHHHHhhhc
Q 007981 323 KCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQ-LGIARKV---TVKSNSTTIVADPYTKAEIQARIMQIKKDLAATD 397 (582)
Q Consensus 323 k~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~-lG~~~~v---~~~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~ 397 (582)
++ +++.+|+|||++|| +++++++++++++ ||+|+ | .++++++++|++|+++.
T Consensus 306 ~~-----v~~~~leria~~tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~----------------- 362 (517)
T 3iyg_Z 306 RR-----AKRRNMERLTLACGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPR----------------- 362 (517)
T ss_pred Ee-----cCHHHHHHHHHHhCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCCCch-----------------
Confidence 64 46889999999999 9999999999999 99999 9 46899999999998653
Q ss_pred hHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCCh
Q 007981 398 NAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDP 476 (582)
Q Consensus 398 ~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~ 476 (582)
.|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++++.+.++.
T Consensus 363 ------------------~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~ 424 (517)
T 3iyg_Z 363 ------------------SVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGR 424 (517)
T ss_pred ------------------hheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHH
Confidence 58999999999999999999999999999999999 99999999999999999998877665
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC----CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHH
Q 007981 477 DEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS----DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSI 552 (582)
Q Consensus 477 eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~ 552 (582)
+++++++|++||+.+|++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+++
T Consensus 425 -eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~ 503 (517)
T 3iyg_Z 425 -AQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVI 503 (517)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHH
Confidence 5699999999999999999999999999999999874 56899999999999999999999999999999999999
Q ss_pred HHHHHChhHHhcC
Q 007981 553 AAVVLTTEAVLAD 565 (582)
Q Consensus 553 a~~iL~iD~iI~~ 565 (582)
|++|||||++|..
T Consensus 504 a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 504 ATNILLVDEIMRA 516 (517)
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999864
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.9e-98 Score=835.26 Aligned_cols=465 Identities=20% Similarity=0.282 Sum_probs=408.4
Q ss_pred hhccc-HHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 52 KILFG-KESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 52 ~~~~g-~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
+...| .+++..|+.||+.|+++|||||||+||+|||++ .|+++|||||+|||++|+++||. ||||+++|++||+
T Consensus 19 ~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~qd~ 94 (568)
T 3p9d_H 19 NSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA----VKVLVMATEQQKI 94 (568)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH----HHHHHHHHHHHHT
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHhhhc
Confidence 44455 679999999999999999999999999999999 99999999999999999999996 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCccc----CCHHHHHHHHHHhcCC-----
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPV----TGRDDIKAVASISAGN----- 200 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v----~~~~~L~~va~ts~~~----- 200 (582)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++++.++ ++++.|.++|+||+++
T Consensus 95 e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~ 174 (568)
T 3p9d_H 95 DMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGS 174 (568)
T ss_dssp TSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTC
T ss_pred eeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcch
Confidence 9999999999999999999999999999999999999999999999999999876 5788999999999753
Q ss_pred chhHHHHHHHHHHHhccC-----C-------cEEEe--CCCCcccceeeeeceEEecccCCccccccccccceeec---c
Q 007981 201 DEFIGNLIADAIIKIGAD-----G-------VILIE--SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFD---N 263 (582)
Q Consensus 201 ~~~l~~li~~Av~~v~~~-----g-------~I~i~--~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~---n 263 (582)
+++|++|++||+.+++++ + .|+++ .|++++|| ++++|++|+++|. +|+++++ |
T Consensus 175 ~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n 244 (568)
T 3p9d_H 175 EDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKK 244 (568)
T ss_dssp HHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSS
T ss_pred HHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCc
Confidence 589999999999999874 3 46664 69999999 9999999999873 3788899 9
Q ss_pred eeEEEeccc-------------CCCHHhHHH-----------HHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeE
Q 007981 264 AKVLITDQK-------------ISTVKEIVP-----------LLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNV 319 (582)
Q Consensus 264 ~kIll~~~~-------------i~~~~el~~-----------~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v 319 (582)
|||++++++ |++++++.+ +++++.++|+|||||+++|+++++++|..++ |
T Consensus 245 ~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~g------I 318 (568)
T 3p9d_H 245 HKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYG------I 318 (568)
T ss_dssp CEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHT------C
T ss_pred ceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCC------e
Confidence 999999998 566676654 6889999999999999999999999999875 4
Q ss_pred EEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhh
Q 007981 320 AVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAA 395 (582)
Q Consensus 320 ~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~ 395 (582)
+|||+++ +.+|+|||++|| +++++++++++++||+|+.|++ +++++++|++|++
T Consensus 319 ~av~~v~-----~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~----------------- 376 (568)
T 3p9d_H 319 LVLKVPS-----KFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQG----------------- 376 (568)
T ss_dssp EEECCCC-----HHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSS-----------------
T ss_pred EEEecCC-----HHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCC-----------------
Confidence 8988776 789999999999 9999999999999999999975 5689999999862
Q ss_pred hchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhh--cC-ccccccHHHHHHHHHHhhhhcc
Q 007981 396 TDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMD--EG-IVPGGGATYVHLLEHIPIIKNS 472 (582)
Q Consensus 396 ~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~--~g-vvpGGGa~e~~~s~~L~~~~~~ 472 (582)
|++++|||+|||+|+.+++|+||++|||||++|++++ ++ +||||||+|++|+.+|++++.+
T Consensus 377 ----------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~ 440 (568)
T 3p9d_H 377 ----------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGER 440 (568)
T ss_dssp ----------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHT
T ss_pred ----------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhcc
Confidence 1246899999999999999999999999999999999 65 9999999999999999999888
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC------------CCcceeecCCCc---ccccccCcccc
Q 007981 473 MEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS------------DWRFGYNAMTGR---YEDLLSAGVAD 537 (582)
Q Consensus 473 ~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~------------~~~~Gid~~~g~---i~d~~~~gI~D 537 (582)
+++.+ ++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|+ +.||++.||||
T Consensus 441 ~~g~e-q~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~d 519 (568)
T 3p9d_H 441 TPGLL-QLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYD 519 (568)
T ss_dssp CCSTH-HHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHH
T ss_pred CCcHH-HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEE
Confidence 77765 689999999999999999999999999999999884 247899999997 99999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCCCCCC
Q 007981 538 PCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKPAVPQ 576 (582)
Q Consensus 538 p~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~~~~~ 576 (582)
|+.||+++|++|+|+|++|||||++|+.+ |...+.+||
T Consensus 520 p~~vk~~al~~A~e~a~~iL~iD~ii~~~-~~~~~~~~~ 557 (568)
T 3p9d_H 520 MLATKKFAINVATEAATTVLSIDQIIMAK-KAGGPRAPQ 557 (568)
T ss_dssp HHHHHHHHHHCCEECBCCC--------------------
T ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHhhcc-ccCCCCCCC
Confidence 99999999999999999999999999998 876554564
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.4e-96 Score=817.86 Aligned_cols=459 Identities=22% Similarity=0.316 Sum_probs=414.1
Q ss_pred chhcccHHHHHHHHHHHHHHHHhhhccCCCCCcceeeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhh
Q 007981 51 KKILFGKESREALQAGIDKLADAVSVTLGPKGRNVILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMND 129 (582)
Q Consensus 51 ~~~~~g~~a~~~~~~~~~~la~~v~stlGP~G~~kmI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~ 129 (582)
.++.+|.+++..|+.||+.|+++|||||||+||+|||++ .|+++|||||+||||+|+++||+ |+|++++|++||+
T Consensus 10 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd~ 85 (546)
T 3p9d_F 10 AESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQDE 85 (546)
T ss_dssp EEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHH
Confidence 567789999999999999999999999999999999999 99999999999999999999996 9999999999999
Q ss_pred hcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHHccCcccC----CHHHHHHHHHHhcCC-----
Q 007981 130 LAGDGTTTAVILAREMIKSGMLSVSFGANPVALKKGMHKTVKELVKVLKQKSFPVT----GRDDIKAVASISAGN----- 200 (582)
Q Consensus 130 e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~~~L~~va~ts~~~----- 200 (582)
++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|++++.|++ +++.|.++|+||+++
T Consensus 86 e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~ 165 (546)
T 3p9d_F 86 ITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDAD 165 (546)
T ss_dssp HCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHH
T ss_pred HhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchh
Confidence 99999999999999999999999999999999999999999999999999999884 678999999999986
Q ss_pred -chhHHHHHHHHHHHhccC-------CcEEE--eCCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEec
Q 007981 201 -DEFIGNLIADAIIKIGAD-------GVILI--ESSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITD 270 (582)
Q Consensus 201 -~~~l~~li~~Av~~v~~~-------g~I~i--~~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~ 270 (582)
.+.|+++++||+..+.+. ..|++ .+|++..|+ ++++|++|+++|.||+ |+++++||||++++
T Consensus 166 ~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~~ 237 (546)
T 3p9d_F 166 LTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLILN 237 (546)
T ss_dssp HCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEEC
T ss_pred HHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEec
Confidence 478999999999988631 23544 579999999 9999999999999985 88999999999999
Q ss_pred ccCCC-------------HHhH-----------HHHHHHHhc---------CCCC-EEEEecCcchHHHHHHHHhhhccc
Q 007981 271 QKIST-------------VKEI-----------VPLLEKTTQ---------LSVP-LLIIAEDISSQVLETLVMNKIRGL 316 (582)
Q Consensus 271 ~~i~~-------------~~el-----------~~~le~i~~---------~~~~-lVI~~~~i~~~al~~L~~n~l~g~ 316 (582)
|+++. ++++ ...++.+.. .|.| |||++++|+++|+++|..|++
T Consensus 238 ~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI--- 314 (546)
T 3p9d_F 238 VSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNI--- 314 (546)
T ss_dssp CCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTC---
T ss_pred CcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCC---
Confidence 98643 2222 234555544 3444 778888999999999998864
Q ss_pred eeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEE---EecccEEEEeCCCChHHHHHHHHHHHHH
Q 007981 317 LNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVT---VKSNSTTIVADPYTKAEIQARIMQIKKD 392 (582)
Q Consensus 317 ~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~---~~~~~~~~~~~~~~~~~i~~ri~~i~~~ 392 (582)
++|+ ++++.+|+|||++|| +++++++++++++||+|+.|+ ++++++++|++|+++
T Consensus 315 ---~~vr-----~v~~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------- 373 (546)
T 3p9d_F 315 ---LALR-----RAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP------------- 373 (546)
T ss_dssp ---EEEC-----CCCHHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC-------------
T ss_pred ---eeEe-----cCCHHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecCCCC-------------
Confidence 6776 456899999999999 999999999999999999994 688999999999865
Q ss_pred HhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHHHHHHHHHHHHhhcC-ccccccHHHHHHHHHHhh---
Q 007981 393 LAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRIEDAKNATFAAMDEG-IVPGGGATYVHLLEHIPI--- 468 (582)
Q Consensus 393 l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~--- 468 (582)
..|||+|||+|+.+++|+||++|||||++|+++++| +|||||++|++|+.+|++
T Consensus 374 ----------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~ 431 (546)
T 3p9d_F 374 ----------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANM 431 (546)
T ss_dssp ----------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHT
T ss_pred ----------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhh
Confidence 369999999999999999999999999999999999 999999999999999998
Q ss_pred hhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhc---------CCCcceeecCCCcccccccCcccccH
Q 007981 469 IKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRT---------SDWRFGYNAMTGRYEDLLSAGVADPC 539 (582)
Q Consensus 469 ~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~---------~~~~~Gid~~~g~i~d~~~~gI~Dp~ 539 (582)
++.+.++. +++++++|++||+.||++||+|||+|+.+++.+|++ .+.++|||+.+|++.||++.|||||+
T Consensus 432 ~~~~~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~ 510 (546)
T 3p9d_F 432 NKLGAKGK-TKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSY 510 (546)
T ss_dssp TTTTTTSH-HHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEH
T ss_pred hhhcCchH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecH
Confidence 57777765 569999999999999999999999999999999986 24579999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHChhHHhcCCCCC
Q 007981 540 RVARCALQNAVSIAAVVLTTEAVLADKIKQ 569 (582)
Q Consensus 540 ~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~ 569 (582)
.||+++|++|+++|++|||||++|+.+ |.
T Consensus 511 ~vk~~al~~A~~~a~~iL~iD~ii~~~-~~ 539 (546)
T 3p9d_F 511 RVLRNAITGATGIASNLLLCDELLRAG-RS 539 (546)
T ss_dssp HHHHHHHHHHHHHHHHHHTEEEEEEEC-CS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCC-cc
Confidence 999999999999999999999999887 54
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2.3e-91 Score=768.65 Aligned_cols=427 Identities=22% Similarity=0.327 Sum_probs=343.3
Q ss_pred eeec-CCCeEEecCHHHHHhhcccccchhhHHhHHHHHHHHhhhhhcCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHH
Q 007981 86 ILSE-SDKLKVINDGVTIARAIELSDTIENAGAMLMQEVASKMNDLAGDGTTTAVILAREMIKSGMLSVSFGANPVALKK 164 (582)
Q Consensus 86 mI~~-~g~~~ITnDG~TIlk~i~l~hp~~~~~akLl~~~a~~qd~e~GDGTTtvvvLa~~Ll~~~~~li~~Gi~p~~I~~ 164 (582)
||++ .|+++|||||+||||+|+++||. ||||+++|++||+++||||||+||||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6788 99999999999999999999995 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCcccC--CHHHHHHHHHHhcC------CchhHHHHHHHHHHHhccC--Cc--------EEEe--
Q 007981 165 GMHKTVKELVKVLKQKSFPVT--GRDDIKAVASISAG------NDEFIGNLIADAIIKIGAD--GV--------ILIE-- 224 (582)
Q Consensus 165 g~~~a~~~~~~~L~~~s~~v~--~~~~L~~va~ts~~------~~~~l~~li~~Av~~v~~~--g~--------I~i~-- 224 (582)
||++|++.+++.|++++.|++ +.+.|.++|+||++ ++++|++|++||+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 999999999999999999987 48999999998855 4689999999999999876 43 5665
Q ss_pred CCCCcccceeeeeceEEecccCCccccccccccceeecceeEEEeccc-------------CCCHHhH-----------H
Q 007981 225 SSSSFETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQK-------------ISTVKEI-----------V 280 (582)
Q Consensus 225 ~G~~~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~-------------i~~~~el-----------~ 280 (582)
+|++++|+ ++++|++|+++|.||+ |+++++||||++++++ |++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~-------m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPN-------MPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTT-------SCSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCC-------CcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999988 9999999999999997 5778999999999999 5666665 7
Q ss_pred HHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccce
Q 007981 281 PLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGI 359 (582)
Q Consensus 281 ~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~ 359 (582)
++++++.++|+||||++++|+++|+++|..|+ |+|| +++++.+|+|||++|| +++++++++++++||+
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av-----~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~ 297 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAV-----RRVKKSDLKRLSKVTGATIIQDLDQITTEDVGT 297 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEE-----CSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEE
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEE-----EeCCHHHHHHHHHHhCCeEecccccCCHhHCCC
Confidence 88999999999999999999999999999986 3777 4778999999999999 9999999999999999
Q ss_pred eeEEEEe---cccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHhHHHHHHHHH
Q 007981 360 ARKVTVK---SNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEVELEDRKLRI 436 (582)
Q Consensus 360 ~~~v~~~---~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~~~~E~~r~i 436 (582)
|+.|++. ++++++|++|+++ ++|||+|||+|+.+++|+||++
T Consensus 298 a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E~er~l 342 (500)
T 3aq1_B 298 AGLVEEKEVRGGKMTYVTGCQNS-----------------------------------KAVTVLLHGGTEHVVDSLDHAL 342 (500)
T ss_dssp EEEEEEEECSSSEEEEEEEETTC-----------------------------------CCEEEEEEESSHHHHHHHHHHH
T ss_pred ceEEEEEEecCeEEEEEECCCCC-----------------------------------ceEEEEecCCcHHHHHHHHHHH
Confidence 9999974 8999999998753 5899999999999999999999
Q ss_pred HHHHHHHHHHhhcC-ccccccHHHHHHHHHHhhhhccCCChhhHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHhhcC-
Q 007981 437 EDAKNATFAAMDEG-IVPGGGATYVHLLEHIPIIKNSMEDPDEQIGADIVAKALIVPAISIATNAGVDGTIVVEKTRTS- 514 (582)
Q Consensus 437 ~DAl~~~~~al~~g-vvpGGGa~e~~~s~~L~~~~~~~~~~eq~~~i~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~- 514 (582)
|||+|++|+++++| +|||||++|++|+.+|++++.+.++. +++++++|++||+.||++||+|||+|+.+++.+|++.
T Consensus 343 ~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 421 (500)
T 3aq1_B 343 NDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGR-EQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQH 421 (500)
T ss_dssp HHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSH-HHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCch-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 99999999999999 99999999999999999998777775 5699999999999999999999999999999999863
Q ss_pred ---CCcceeecCCCcccccccCcccccHHHHHHHHHHHHHHHHHHHChhHHhcCCCCCCCC
Q 007981 515 ---DWRFGYNAMTGRYEDLLSAGVADPCRVARCALQNAVSIAAVVLTTEAVLADKIKQPKP 572 (582)
Q Consensus 515 ---~~~~Gid~~~g~i~d~~~~gI~Dp~~vk~~~l~~A~e~a~~iL~iD~iI~~~~p~~~~ 572 (582)
+.++|||+.+|++.||++.|||||+.||+++|++|+++|++|||||++|... |++++
T Consensus 422 ~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~-~~~~~ 481 (500)
T 3aq1_B 422 EKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASK-GSANQ 481 (500)
T ss_dssp HTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred cCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccCCC
Confidence 3589999999999999999999999999999999999999999999999997 76544
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-43 Score=333.77 Aligned_cols=187 Identities=40% Similarity=0.653 Sum_probs=181.0
Q ss_pred eeeeeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhh
Q 007981 233 IVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNK 312 (582)
Q Consensus 233 ~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~ 312 (582)
+++++||.|||||+||||+|++++|..+++||+||++|.+|++.++++|+||.+.+++.||+|++++|+.+||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeEEEEeCCCcCCCcHHHHHHHHHHhC------CccccccCCCccccceeeEEEEecccEEEEeCCCChHHHHHHH
Q 007981 313 IRGLLNVAVVKCPGFGDGKKALLQDIALMTG------ELGLTLAGATSDQLGIARKVTVKSNSTTIVADPYTKAEIQARI 386 (582)
Q Consensus 313 l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG------~i~~~l~~l~~~~lG~~~~v~~~~~~~~~~~~~~~~~~i~~ri 386 (582)
++|.++|+|||+||||+.|+..|+|||++|| ..+.++++++.++||+|++|.++++++++++|.++++.|++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 9999999999999999999999999999999 3456789999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEE
Q 007981 387 MQIKKDLAATDNAYLSRKLSERIAKLSGGVAVI 419 (582)
Q Consensus 387 ~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI 419 (582)
++|+.+++.++++|+||+|+||+++|+|+++.|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999998764
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=3e-42 Score=324.48 Aligned_cols=183 Identities=46% Similarity=0.788 Sum_probs=176.9
Q ss_pred eeceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhcc
Q 007981 236 EEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRG 315 (582)
Q Consensus 236 v~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g 315 (582)
-+||.||+||+||||+|++++|..+++||+||++|.+|+++++++|+||.+.+.+.||+|++++|+.+||++|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEEeCCCcCCCcHHHHHHHHHHhC------CccccccCCCccccceeeEEEEecccEEEEeCCCChHHHHHHHHHH
Q 007981 316 LLNVAVVKCPGFGDGKKALLQDIALMTG------ELGLTLAGATSDQLGIARKVTVKSNSTTIVADPYTKAEIQARIMQI 389 (582)
Q Consensus 316 ~~~v~aVk~~~~~~~~~~~Le~ia~~tG------~i~~~l~~l~~~~lG~~~~v~~~~~~~~~~~~~~~~~~i~~ri~~i 389 (582)
.++|+|||+||||+.|+..|+|||++|| ..+.++++++.++||+|++|.+++++++++.|.++++.|++||++|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999 3456789999999999999999999999999999999999999999
Q ss_pred HHHHhhhchHHHHHHHHHHHHHhcCCeEE
Q 007981 390 KKDLAATDNAYLSRKLSERIAKLSGGVAV 418 (582)
Q Consensus 390 ~~~l~~~~~~~e~~~l~er~~~l~~~~~t 418 (582)
+.+++.++++|+||+|+||+++|+|++++
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999999999999999999763
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.97 E-value=9.1e-32 Score=241.79 Aligned_cols=138 Identities=50% Similarity=0.818 Sum_probs=133.7
Q ss_pred ceEEecccCCccccccccccceeecceeEEEecccCCCHHhHHHHHHHHhcCCCCEEEEecCcchHHHHHHHHhhhccce
Q 007981 238 GMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKISTVKEIVPLLEKTTQLSVPLLIIAEDISSQVLETLVMNKIRGLL 317 (582)
Q Consensus 238 Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~~~el~~~le~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~ 317 (582)
||.|||||+||||++++++|..+++||+||++|++|++.++++|+||++.+.+.||+|++++|+.+||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCCcCCCcHHHHHHHHHHhC------CccccccCCCccccceeeEEEEecccEEEEeC
Q 007981 318 NVAVVKCPGFGDGKKALLQDIALMTG------ELGLTLAGATSDQLGIARKVTVKSNSTTIVAD 375 (582)
Q Consensus 318 ~v~aVk~~~~~~~~~~~Le~ia~~tG------~i~~~l~~l~~~~lG~~~~v~~~~~~~~~~~~ 375 (582)
+|+|||+||||+.|+..|+|||++|| ..+.++++.+.++||+|++|.++++++++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 99999999999999999999999999 45568899999999999999999999999875
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.88 E-value=2.8e-22 Score=191.13 Aligned_cols=145 Identities=19% Similarity=0.237 Sum_probs=120.9
Q ss_pred cccceeeeeceEEecccCCccccccccccceeecceeEEEecccCCC-------------HHh-----------HHHHHH
Q 007981 229 FETSIVVEEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIST-------------VKE-----------IVPLLE 284 (582)
Q Consensus 229 ~~ds~~lv~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~~-------------~~e-----------l~~~le 284 (582)
++|| ++++|++|++++.||. ||++++||||++++++++. +++ +..+++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSSTT-------SCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCCC-------CCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 4678 8999999999999874 8889999999999998642 222 245678
Q ss_pred HHhcCCCCEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccce-eeE
Q 007981 285 KTTQLSVPLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGI-ARK 362 (582)
Q Consensus 285 ~i~~~~~~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~-~~~ 362 (582)
++.++|+|+||++++|+|.|+++|.++.+ +||+ ++++.+|++||++|| .++++++++++++||+ |+.
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~gI------~~vr-----~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~ 141 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRANV------TAIR-----RVRKTDNNRIARACGARIVSRPEELREDDVGTGAGL 141 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHTTC------EEEC-----CCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEE
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHCCC------EEEe-----cCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccE
Confidence 99999999999999999999999998753 6765 566899999999999 9999999999999999 999
Q ss_pred EEE---ecccEEEEeCCCChHHHHHHHHHHHHHHhhhchHHHHHHHHHHHHHhcCCeEEEEecCCCHh
Q 007981 363 VTV---KSNSTTIVADPYTKAEIQARIMQIKKDLAATDNAYLSRKLSERIAKLSGGVAVIKVGAHTEV 427 (582)
Q Consensus 363 v~~---~~~~~~~~~~~~~~~~i~~ri~~i~~~l~~~~~~~e~~~l~er~~~l~~~~~tI~vrG~t~~ 427 (582)
|++ +++++++|+||+++ ..|||+|||+|..
T Consensus 142 v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 142 LEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp EEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred EEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 984 78899999999764 4799999999863
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.79 E-value=1.3e-18 Score=162.65 Aligned_cols=126 Identities=22% Similarity=0.255 Sum_probs=109.0
Q ss_pred eeceEEecccCCccccccccccceeecceeEEEecccCC-------------CHHhH-----------HHHHHHHhcCCC
Q 007981 236 EEGMKIDKGYLSPQFITNQEKSLVEFDNAKVLITDQKIS-------------TVKEI-----------VPLLEKTTQLSV 291 (582)
Q Consensus 236 v~Gi~~~~~~~~p~~~~~~~~~~~~~~n~kIll~~~~i~-------------~~~el-----------~~~le~i~~~~~ 291 (582)
++|++|++++.||. ||++++||||++++++++ +++++ ..+++++.++|+
T Consensus 1 i~Gvv~~k~~~~~~-------mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSK-------MPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTT-------SCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCC-------CCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 57999999999974 889999999999999864 33333 356788999999
Q ss_pred CEEEEecCcchHHHHHHHHhhhccceeEEEEeCCCcCCCcHHHHHHHHHHhC-CccccccCCCccccceeeEEEE---ec
Q 007981 292 PLLIIAEDISSQVLETLVMNKIRGLLNVAVVKCPGFGDGKKALLQDIALMTG-ELGLTLAGATSDQLGIARKVTV---KS 367 (582)
Q Consensus 292 ~lVI~~~~i~~~al~~L~~n~l~g~~~v~aVk~~~~~~~~~~~Le~ia~~tG-~i~~~l~~l~~~~lG~~~~v~~---~~ 367 (582)
|+||++++|+|.|+++|.++.+ +||+ ++++.+|++||++|| +++++++++++++||+|+.|++ ++
T Consensus 74 nVVl~~k~I~d~a~~~l~k~gI------~~v~-----~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~ 142 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEGI------YAVR-----RVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGD 142 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTTC------EEEC-----SCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETT
T ss_pred eEEEECCccCHHHHHHHHHCCC------EEEc-----cCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECC
Confidence 9999999999999999998753 6765 566899999999999 9999999999999999999985 78
Q ss_pred ccEEEEeCCCCh
Q 007981 368 NSTTIVADPYTK 379 (582)
Q Consensus 368 ~~~~~~~~~~~~ 379 (582)
+++++|++|++.
T Consensus 143 ~~~~~~~g~~~~ 154 (159)
T 1ass_A 143 DRMTFVMGCKNH 154 (159)
T ss_dssp EEEEEEESCC--
T ss_pred eEEEEEECCCCc
Confidence 899999999764
Done!