Query 007982
Match_columns 582
No_of_seqs 708 out of 3113
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 17:55:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007982.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007982hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0927 Predicted transporter 100.0 5E-111 1E-115 872.3 45.1 578 1-579 1-603 (614)
2 COG0488 Uup ATPase components 100.0 1.9E-96 4E-101 797.4 54.4 499 72-575 3-528 (530)
3 PRK10636 putative ABC transpor 100.0 6.4E-90 1.4E-94 774.9 59.2 497 72-573 1-518 (638)
4 PLN03073 ABC transporter F fam 100.0 3.1E-87 6.8E-92 755.6 64.9 502 69-574 174-716 (718)
5 KOG0062 ATPase component of AB 100.0 1.2E-89 2.6E-94 709.1 35.5 496 70-579 78-576 (582)
6 PRK11147 ABC transporter ATPas 100.0 1.1E-86 2.4E-91 750.1 59.8 492 72-572 3-528 (635)
7 PRK15064 ABC transporter ATP-b 100.0 2.7E-84 5.8E-89 718.4 59.2 498 72-573 1-526 (530)
8 PRK11819 putative ABC transpor 100.0 5.1E-83 1.1E-87 710.9 60.4 495 72-576 6-537 (556)
9 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 9.9E-83 2.2E-87 708.4 55.7 496 72-577 4-536 (552)
10 KOG0066 eIF2-interacting prote 100.0 7E-84 1.5E-88 650.6 35.4 499 71-578 263-797 (807)
11 COG1123 ATPase components of v 100.0 2.9E-81 6.3E-86 666.1 48.3 455 72-572 5-519 (539)
12 TIGR03269 met_CoM_red_A2 methy 100.0 1.4E-78 2.9E-83 671.6 51.0 438 73-574 1-519 (520)
13 PRK10261 glutathione transport 100.0 3.1E-78 6.7E-83 679.6 49.4 473 72-571 12-552 (623)
14 PRK15134 microcin C ABC transp 100.0 2.7E-78 5.9E-83 670.2 47.2 447 72-572 5-515 (529)
15 PRK13549 xylose transporter AT 100.0 3.1E-78 6.7E-83 666.3 44.4 438 72-570 5-492 (506)
16 PRK09700 D-allose transporter 100.0 5E-78 1.1E-82 665.5 45.2 432 72-562 5-489 (510)
17 PRK15439 autoinducer 2 ABC tra 100.0 5.5E-78 1.2E-82 664.3 45.0 441 72-571 11-491 (510)
18 PRK10938 putative molybdenum t 100.0 2.2E-77 4.8E-82 657.5 45.2 442 72-563 3-484 (490)
19 TIGR02633 xylG D-xylose ABC tr 100.0 3.6E-77 7.9E-82 657.4 44.9 440 72-570 1-490 (500)
20 PRK10762 D-ribose transporter 100.0 4.6E-77 1E-81 656.2 44.0 432 72-570 4-482 (501)
21 PRK11288 araG L-arabinose tran 100.0 8.1E-77 1.8E-81 654.3 43.4 436 72-571 4-484 (501)
22 PRK10982 galactose/methyl gala 100.0 2.1E-75 4.6E-80 641.7 43.6 433 75-571 1-479 (491)
23 COG4172 ABC-type uncharacteriz 100.0 2E-73 4.3E-78 572.7 39.8 448 72-573 6-517 (534)
24 PRK13409 putative ATPase RIL; 100.0 9.6E-72 2.1E-76 619.3 43.1 429 77-561 78-532 (590)
25 COG1129 MglA ABC-type sugar tr 100.0 7.2E-68 1.6E-72 560.2 38.7 428 72-562 8-481 (500)
26 KOG0055 Multidrug/pheromone ex 100.0 1.7E-66 3.6E-71 588.6 39.9 201 367-572 988-1213(1228)
27 COG3845 ABC-type uncharacteriz 100.0 6.8E-64 1.5E-68 519.1 37.2 432 72-561 4-482 (501)
28 PTZ00265 multidrug resistance 100.0 1.6E-61 3.5E-66 582.3 52.4 203 366-572 1165-1452(1466)
29 TIGR01257 rim_protein retinal- 100.0 3.1E-59 6.8E-64 562.3 54.4 207 365-575 1936-2162(2272)
30 PLN03232 ABC transporter C fam 100.0 6.9E-60 1.5E-64 572.8 48.2 201 366-572 1234-1458(1495)
31 PLN03130 ABC transporter C fam 100.0 1.2E-59 2.6E-64 571.1 49.4 201 366-572 1237-1461(1622)
32 TIGR00957 MRP_assoc_pro multi 100.0 3.3E-59 7.1E-64 567.7 50.4 201 366-572 1284-1508(1522)
33 PTZ00243 ABC transporter; Prov 100.0 2.2E-57 4.8E-62 550.6 51.6 201 366-572 1308-1533(1560)
34 TIGR01271 CFTR_protein cystic 100.0 1.3E-55 2.8E-60 534.8 48.2 200 366-572 1217-1440(1490)
35 TIGR00956 3a01205 Pleiotropic 100.0 1.3E-55 2.7E-60 530.8 45.6 198 366-567 759-988 (1394)
36 PLN03140 ABC transporter G fam 100.0 2.8E-54 6E-59 517.5 42.8 198 366-567 867-1105(1470)
37 COG1245 Predicted ATPase, RNas 100.0 1.4E-50 3E-55 412.9 33.0 426 77-557 79-531 (591)
38 KOG0054 Multidrug resistance-a 100.0 1.8E-49 4E-54 460.0 40.6 201 366-572 1138-1362(1381)
39 COG1126 GlnQ ABC-type polar am 100.0 1.2E-50 2.5E-55 380.3 20.8 204 365-573 1-226 (240)
40 COG1126 GlnQ ABC-type polar am 100.0 6.1E-49 1.3E-53 368.7 22.8 210 72-287 2-226 (240)
41 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.1E-47 2.3E-52 376.0 23.3 206 364-573 2-228 (254)
42 COG1120 FepC ABC-type cobalami 100.0 1.1E-46 2.4E-51 370.7 22.3 202 365-571 1-227 (258)
43 COG1124 DppF ABC-type dipeptid 100.0 6E-46 1.3E-50 355.5 20.8 207 365-572 2-231 (252)
44 PRK00349 uvrA excinuclease ABC 100.0 1.4E-44 3.1E-49 414.5 33.9 336 175-572 466-927 (943)
45 COG3638 ABC-type phosphate/pho 100.0 1.1E-45 2.4E-50 351.0 20.4 206 365-574 2-239 (258)
46 COG1116 TauB ABC-type nitrate/ 100.0 2.2E-45 4.8E-50 354.9 21.9 190 365-558 2-207 (248)
47 COG1135 AbcC ABC-type metal io 100.0 1E-45 2.2E-50 363.8 19.7 205 366-574 1-233 (339)
48 COG1127 Ttg2A ABC-type transpo 100.0 3.5E-45 7.6E-50 348.5 22.3 205 364-572 6-235 (263)
49 COG1125 OpuBA ABC-type proline 100.0 7E-45 1.5E-49 347.8 22.1 210 72-286 1-225 (309)
50 TIGR00630 uvra excinuclease AB 100.0 8.7E-44 1.9E-48 407.2 34.5 328 182-570 470-923 (924)
51 COG1125 OpuBA ABC-type proline 100.0 2.9E-45 6.3E-50 350.4 18.5 203 366-573 1-226 (309)
52 PRK00635 excinuclease ABC subu 100.0 1.6E-43 3.4E-48 420.6 35.1 328 182-572 459-906 (1809)
53 COG1135 AbcC ABC-type metal io 100.0 2.4E-44 5.2E-49 354.1 21.9 209 72-286 1-231 (339)
54 COG1122 CbiO ABC-type cobalt t 100.0 5.7E-44 1.2E-48 351.2 23.4 207 365-574 2-230 (235)
55 COG1136 SalX ABC-type antimicr 100.0 7.2E-44 1.5E-48 344.3 23.5 193 366-561 1-221 (226)
56 COG1124 DppF ABC-type dipeptid 100.0 2.9E-44 6.3E-49 343.9 17.4 201 72-277 3-223 (252)
57 COG1116 TauB ABC-type nitrate/ 100.0 2.2E-44 4.8E-49 347.9 16.7 196 72-272 3-207 (248)
58 COG2884 FtsE Predicted ATPase 100.0 4.4E-44 9.5E-49 328.7 17.7 196 366-564 1-219 (223)
59 COG1120 FepC ABC-type cobalami 100.0 6.7E-44 1.5E-48 351.0 20.0 208 72-285 2-227 (258)
60 COG1127 Ttg2A ABC-type transpo 100.0 1.9E-43 4.2E-48 336.6 22.3 214 71-286 7-235 (263)
61 COG1118 CysA ABC-type sulfate/ 100.0 1.6E-43 3.5E-48 347.4 19.3 203 366-573 2-228 (345)
62 COG3842 PotA ABC-type spermidi 100.0 2.9E-43 6.2E-48 361.2 20.0 205 364-573 3-227 (352)
63 TIGR02314 ABC_MetN D-methionin 100.0 3.6E-42 7.9E-47 358.4 25.2 202 366-571 1-229 (343)
64 PRK13537 nodulation ABC transp 100.0 5.3E-42 1.2E-46 353.8 26.1 206 363-573 4-228 (306)
65 COG3839 MalK ABC-type sugar tr 100.0 1.6E-42 3.4E-47 353.8 21.7 204 365-573 2-224 (338)
66 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.9E-43 1.7E-47 341.7 18.5 209 71-286 3-227 (254)
67 COG1131 CcmA ABC-type multidru 100.0 4.3E-42 9.2E-47 351.5 24.6 207 365-575 3-229 (293)
68 TIGR00960 3a0501s02 Type II (G 100.0 3.4E-42 7.3E-47 338.5 22.2 192 366-560 1-216 (216)
69 cd03261 ABC_Org_Solvent_Resist 100.0 9.1E-42 2E-46 339.8 24.4 200 367-571 1-225 (235)
70 COG3638 ABC-type phosphate/pho 100.0 6.4E-42 1.4E-46 325.3 21.5 210 72-284 3-235 (258)
71 COG1122 CbiO ABC-type cobalt t 100.0 3.6E-42 7.9E-47 338.5 20.2 209 72-286 3-228 (235)
72 PRK11650 ugpC glycerol-3-phosp 100.0 1.2E-41 2.6E-46 357.1 25.0 204 366-573 3-225 (356)
73 PRK13536 nodulation factor exp 100.0 1.9E-41 4.2E-46 353.4 26.3 207 362-573 37-262 (340)
74 cd03226 ABC_cobalt_CbiO_domain 100.0 1.2E-41 2.5E-46 332.0 22.9 192 368-561 1-205 (205)
75 COG1136 SalX ABC-type antimicr 100.0 1.6E-41 3.5E-46 327.9 23.0 202 72-275 1-221 (226)
76 COG0411 LivG ABC-type branched 100.0 2.3E-42 5E-47 331.1 16.9 205 364-573 2-240 (250)
77 COG4555 NatA ABC-type Na+ tran 100.0 3.5E-42 7.6E-47 318.7 17.2 210 72-285 1-221 (245)
78 COG0488 Uup ATPase components 100.0 1.2E-41 2.6E-46 369.7 23.8 207 365-576 2-244 (530)
79 PRK11432 fbpC ferric transport 100.0 2.5E-41 5.5E-46 353.8 25.2 204 364-572 4-226 (351)
80 TIGR01288 nodI ATP-binding ABC 100.0 3.1E-41 6.6E-46 348.2 25.2 204 365-573 3-225 (303)
81 COG4555 NatA ABC-type Na+ tran 100.0 3.3E-42 7.2E-47 318.8 16.1 205 366-574 1-224 (245)
82 PRK11247 ssuB aliphatic sulfon 100.0 3.9E-41 8.4E-46 338.9 25.1 195 364-562 10-214 (257)
83 cd03259 ABC_Carb_Solutes_like 100.0 1.9E-41 4.2E-46 332.4 22.2 192 367-562 1-211 (213)
84 PRK13647 cbiO cobalt transport 100.0 4.1E-41 8.8E-46 342.4 25.1 203 365-570 3-225 (274)
85 PRK09536 btuD corrinoid ABC tr 100.0 4.2E-41 9E-46 356.5 25.9 202 365-571 2-227 (402)
86 PRK13651 cobalt transporter AT 100.0 3.6E-41 7.8E-46 347.0 24.4 205 366-572 2-254 (305)
87 PRK13643 cbiO cobalt transport 100.0 3.9E-41 8.5E-46 344.8 24.5 205 366-572 1-233 (288)
88 cd03265 ABC_DrrA DrrA is the A 100.0 3.7E-41 8.1E-46 332.1 23.3 198 367-569 1-218 (220)
89 TIGR03265 PhnT2 putative 2-ami 100.0 4.6E-41 1E-45 352.3 25.3 203 365-572 3-224 (353)
90 TIGR02315 ABC_phnC phosphonate 100.0 4.3E-41 9.2E-46 336.6 23.8 203 366-572 1-235 (243)
91 PRK11308 dppF dipeptide transp 100.0 6.5E-41 1.4E-45 348.2 25.8 208 364-572 3-244 (327)
92 PRK13634 cbiO cobalt transport 100.0 5.4E-41 1.2E-45 344.2 24.8 205 366-572 2-235 (290)
93 PRK15079 oligopeptide ABC tran 100.0 6.5E-41 1.4E-45 348.5 25.6 208 364-572 6-251 (331)
94 cd03256 ABC_PhnC_transporter A 100.0 6.9E-41 1.5E-45 334.6 24.8 202 367-572 1-234 (241)
95 PRK11831 putative ABC transpor 100.0 6.6E-41 1.4E-45 340.2 24.8 205 363-572 4-233 (269)
96 cd03296 ABC_CysA_sulfate_impor 100.0 6.6E-41 1.4E-45 334.4 24.3 201 366-571 2-225 (239)
97 PRK13637 cbiO cobalt transport 100.0 8.8E-41 1.9E-45 342.1 25.6 205 366-572 2-234 (287)
98 COG3842 PotA ABC-type spermidi 100.0 9.1E-42 2E-46 350.1 18.2 209 72-286 5-226 (352)
99 PRK11153 metN DL-methionine tr 100.0 6.9E-41 1.5E-45 350.7 24.6 203 366-572 1-230 (343)
100 TIGR02673 FtsE cell division A 100.0 5.3E-41 1.1E-45 329.5 22.1 191 366-559 1-214 (214)
101 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.7E-41 1.2E-45 330.7 22.2 193 367-562 1-214 (220)
102 PRK13641 cbiO cobalt transport 100.0 1.1E-40 2.5E-45 341.4 25.2 205 366-572 2-234 (287)
103 PRK13631 cbiO cobalt transport 100.0 1.5E-40 3.4E-45 344.3 26.1 207 363-571 18-264 (320)
104 cd03219 ABC_Mj1267_LivG_branch 100.0 7.3E-41 1.6E-45 333.4 22.6 200 367-571 1-231 (236)
105 PRK09452 potA putrescine/sperm 100.0 1.2E-40 2.7E-45 350.9 25.5 205 363-572 11-234 (375)
106 PRK15112 antimicrobial peptide 100.0 1.2E-40 2.6E-45 337.9 24.5 208 364-572 2-239 (267)
107 cd03235 ABC_Metallic_Cations A 100.0 4.6E-41 9.9E-46 329.7 20.6 191 368-560 1-210 (213)
108 PRK11000 maltose/maltodextrin 100.0 1.1E-40 2.4E-45 351.9 25.1 202 366-572 3-223 (369)
109 PRK10619 histidine/lysine/argi 100.0 1.7E-40 3.8E-45 335.0 25.4 205 364-572 3-241 (257)
110 COG1118 CysA ABC-type sulfate/ 100.0 1.7E-41 3.7E-46 333.1 17.3 210 72-285 2-226 (345)
111 PRK13646 cbiO cobalt transport 100.0 1.5E-40 3.3E-45 340.2 25.1 205 366-572 2-235 (286)
112 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 7.6E-41 1.6E-45 329.3 21.9 190 367-560 1-218 (218)
113 TIGR03522 GldA_ABC_ATP gliding 100.0 1.9E-40 4E-45 342.0 25.7 203 366-573 2-222 (301)
114 PRK11701 phnK phosphonate C-P 100.0 1.9E-40 4E-45 335.0 25.2 206 364-571 4-240 (258)
115 PRK10851 sulfate/thiosulfate t 100.0 2E-40 4.3E-45 347.5 25.9 202 366-572 2-226 (353)
116 TIGR02769 nickel_nikE nickel i 100.0 2E-40 4.3E-45 336.0 25.0 206 366-572 2-240 (265)
117 PRK13636 cbiO cobalt transport 100.0 2.9E-40 6.3E-45 337.7 26.2 206 364-572 3-231 (283)
118 PRK10908 cell division protein 100.0 1.6E-40 3.4E-45 328.0 23.2 194 366-562 1-217 (222)
119 PRK10575 iron-hydroxamate tran 100.0 2.5E-40 5.4E-45 335.3 25.3 206 362-572 7-237 (265)
120 cd03257 ABC_NikE_OppD_transpor 100.0 2.7E-40 5.8E-45 327.6 24.8 197 366-562 1-226 (228)
121 PRK09544 znuC high-affinity zi 100.0 2.4E-40 5.3E-45 332.2 24.6 203 365-572 3-209 (251)
122 TIGR03258 PhnT 2-aminoethylpho 100.0 1.8E-40 3.9E-45 348.4 24.6 203 366-573 5-229 (362)
123 cd03260 ABC_PstB_phosphate_tra 100.0 1.5E-40 3.2E-45 329.3 22.6 198 367-569 1-226 (227)
124 cd03301 ABC_MalK_N The N-termi 100.0 1.9E-40 4E-45 325.4 23.0 192 367-562 1-211 (213)
125 COG3839 MalK ABC-type sugar tr 100.0 3.5E-41 7.6E-46 344.0 18.5 208 72-285 3-222 (338)
126 cd03263 ABC_subfamily_A The AB 100.0 1.6E-40 3.6E-45 327.4 22.6 200 367-570 1-219 (220)
127 PRK13652 cbiO cobalt transport 100.0 2.8E-40 6.1E-45 336.9 24.8 205 365-572 2-227 (277)
128 PRK13537 nodulation ABC transp 100.0 2.2E-40 4.8E-45 341.7 24.3 208 71-284 6-225 (306)
129 cd03258 ABC_MetN_methionine_tr 100.0 2.2E-40 4.8E-45 329.4 23.5 202 366-571 1-229 (233)
130 COG1131 CcmA ABC-type multidru 100.0 1.8E-40 3.9E-45 339.5 23.4 207 72-284 4-224 (293)
131 PRK14250 phosphate ABC transpo 100.0 4.6E-40 1E-44 328.7 25.8 201 366-571 3-220 (241)
132 PRK15093 antimicrobial peptide 100.0 2.7E-40 5.8E-45 344.6 24.9 207 365-572 2-248 (330)
133 PRK11264 putative amino-acid A 100.0 2.8E-40 6.2E-45 332.1 24.2 202 366-572 3-233 (250)
134 TIGR03411 urea_trans_UrtD urea 100.0 4.1E-40 8.8E-45 329.4 25.1 203 365-572 1-231 (242)
135 cd03268 ABC_BcrA_bacitracin_re 100.0 2.3E-40 5E-45 323.5 22.8 192 367-562 1-206 (208)
136 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.1E-40 6.7E-45 330.2 24.1 202 367-571 1-224 (242)
137 PRK11022 dppD dipeptide transp 100.0 3.5E-40 7.5E-45 342.8 25.3 206 366-572 3-243 (326)
138 COG2884 FtsE Predicted ATPase 100.0 5.2E-41 1.1E-45 308.4 16.8 204 72-278 1-219 (223)
139 TIGR02323 CP_lyasePhnK phospho 100.0 4.5E-40 9.7E-45 331.3 25.3 206 365-572 2-238 (253)
140 PRK09493 glnQ glutamine ABC tr 100.0 2.9E-40 6.3E-45 330.0 23.6 202 366-572 1-225 (240)
141 PRK11629 lolD lipoprotein tran 100.0 4.8E-40 1E-44 327.0 25.0 195 364-562 3-225 (233)
142 cd03269 ABC_putative_ATPase Th 100.0 2.1E-40 4.6E-45 324.3 22.0 192 367-562 1-208 (210)
143 COG3840 ThiQ ABC-type thiamine 100.0 1.4E-40 3.1E-45 303.1 19.2 200 366-572 1-219 (231)
144 TIGR02314 ABC_MetN D-methionin 100.0 3.8E-40 8.2E-45 343.2 25.2 208 72-285 1-229 (343)
145 PRK11248 tauB taurine transpor 100.0 3.1E-40 6.7E-45 332.5 23.8 193 366-562 1-211 (255)
146 PRK11819 putative ABC transpor 100.0 3.8E-40 8.1E-45 367.0 26.8 206 364-573 4-251 (556)
147 PRK00635 excinuclease ABC subu 100.0 1.7E-38 3.6E-43 377.9 42.4 185 174-413 785-981 (1809)
148 cd03266 ABC_NatA_sodium_export 100.0 2.3E-40 5.1E-45 325.8 22.1 194 366-562 1-216 (218)
149 cd03218 ABC_YhbG The ABC trans 100.0 3.2E-40 6.9E-45 328.0 23.2 201 367-572 1-222 (232)
150 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.7E-40 1.2E-44 327.1 24.9 202 366-573 1-222 (236)
151 PRK11607 potG putrescine trans 100.0 5.3E-40 1.1E-44 346.7 26.0 204 364-572 17-239 (377)
152 TIGR02211 LolD_lipo_ex lipopro 100.0 3.4E-40 7.5E-45 325.3 23.0 192 366-561 1-220 (221)
153 PRK10636 putative ABC transpor 100.0 5.4E-40 1.2E-44 370.1 27.6 204 366-573 1-237 (638)
154 cd03292 ABC_FtsE_transporter F 100.0 2.2E-40 4.9E-45 325.0 21.5 191 367-560 1-214 (214)
155 cd03261 ABC_Org_Solvent_Resist 100.0 3.7E-40 8E-45 328.2 23.3 207 73-285 1-225 (235)
156 TIGR00960 3a0501s02 Type II (G 100.0 3.1E-40 6.8E-45 324.5 22.3 198 72-274 1-216 (216)
157 cd03224 ABC_TM1139_LivF_branch 100.0 3.7E-40 7.9E-45 325.3 22.8 200 367-571 1-220 (222)
158 PRK13638 cbiO cobalt transport 100.0 4.2E-40 9.1E-45 334.7 23.6 203 366-572 1-225 (271)
159 cd03264 ABC_drug_resistance_li 100.0 3.9E-40 8.4E-45 322.7 22.4 191 367-562 1-209 (211)
160 PRK15064 ABC transporter ATP-b 100.0 5E-40 1.1E-44 364.5 26.2 204 366-572 1-242 (530)
161 cd03225 ABC_cobalt_CbiO_domain 100.0 2.6E-40 5.6E-45 323.9 21.1 190 368-559 1-211 (211)
162 PRK11300 livG leucine/isoleuci 100.0 8.2E-40 1.8E-44 329.7 25.2 204 364-572 3-243 (255)
163 PRK13649 cbiO cobalt transport 100.0 5.8E-40 1.3E-44 335.3 24.4 205 366-572 2-234 (280)
164 PRK13650 cbiO cobalt transport 100.0 8.3E-40 1.8E-44 333.7 25.0 204 365-572 3-229 (279)
165 PRK10584 putative ABC transpor 100.0 6.8E-40 1.5E-44 324.8 23.7 195 364-562 4-226 (228)
166 PRK09984 phosphonate/organopho 100.0 8.5E-40 1.8E-44 330.9 24.8 203 364-571 2-241 (262)
167 PRK13639 cbiO cobalt transport 100.0 8.5E-40 1.9E-44 333.0 24.9 204 366-572 1-226 (275)
168 COG1117 PstB ABC-type phosphat 100.0 7.5E-41 1.6E-45 312.8 15.6 205 364-573 5-238 (253)
169 PRK09473 oppD oligopeptide tra 100.0 9.7E-40 2.1E-44 339.8 25.8 209 363-572 9-251 (330)
170 PRK10895 lipopolysaccharide AB 100.0 6.5E-40 1.4E-44 327.7 23.5 202 366-572 3-226 (241)
171 PRK11124 artP arginine transpo 100.0 1E-39 2.2E-44 326.5 24.7 201 366-571 2-229 (242)
172 TIGR01188 drrA daunorubicin re 100.0 4.1E-40 8.8E-45 339.7 22.4 194 375-573 2-214 (302)
173 PRK11231 fecE iron-dicitrate t 100.0 1.1E-39 2.5E-44 328.7 24.9 202 366-572 2-227 (255)
174 PRK13548 hmuV hemin importer A 100.0 1.3E-39 2.7E-44 328.8 25.0 202 366-572 2-230 (258)
175 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-39 2.3E-44 323.9 23.7 202 367-573 1-222 (230)
176 PRK13536 nodulation factor exp 100.0 7.5E-40 1.6E-44 341.5 23.5 209 71-285 40-260 (340)
177 TIGR01978 sufC FeS assembly AT 100.0 9.4E-40 2E-44 326.9 23.3 202 367-572 1-234 (243)
178 COG1117 PstB ABC-type phosphat 100.0 2.1E-40 4.6E-45 309.7 17.1 214 72-286 7-237 (253)
179 PRK14242 phosphate transporter 100.0 1.5E-39 3.2E-44 327.5 24.6 204 363-571 3-236 (253)
180 cd03294 ABC_Pro_Gly_Bertaine T 100.0 6.5E-40 1.4E-44 332.8 22.2 200 368-572 26-250 (269)
181 PRK10418 nikD nickel transport 100.0 2.7E-39 5.9E-44 325.7 26.3 205 365-572 3-230 (254)
182 PRK10253 iron-enterobactin tra 100.0 1.6E-39 3.4E-44 329.4 24.6 204 364-572 5-233 (265)
183 cd03262 ABC_HisP_GlnQ_permease 100.0 6.3E-40 1.4E-44 321.6 21.0 190 367-560 1-213 (213)
184 PRK13635 cbiO cobalt transport 100.0 1.8E-39 3.8E-44 331.2 25.0 205 364-572 3-229 (279)
185 PRK13645 cbiO cobalt transport 100.0 1.7E-39 3.8E-44 333.1 25.1 205 365-571 5-239 (289)
186 PRK11614 livF leucine/isoleuci 100.0 1.4E-39 3.1E-44 324.4 23.5 204 364-572 3-226 (237)
187 TIGR00972 3a0107s01c2 phosphat 100.0 2.2E-39 4.8E-44 325.0 25.0 201 366-572 1-232 (247)
188 PRK10419 nikE nickel transport 100.0 1.8E-39 3.9E-44 329.4 24.6 205 365-570 2-239 (268)
189 TIGR03005 ectoine_ehuA ectoine 100.0 1.6E-39 3.5E-44 327.0 24.0 201 367-572 1-236 (252)
190 cd03259 ABC_Carb_Solutes_like 100.0 7.8E-40 1.7E-44 321.0 21.0 199 73-276 1-211 (213)
191 PRK10771 thiQ thiamine transpo 100.0 2.1E-39 4.5E-44 322.2 24.3 201 366-573 1-220 (232)
192 PRK10070 glycine betaine trans 100.0 1.9E-39 4.2E-44 343.6 25.5 188 381-572 42-254 (400)
193 PRK13644 cbiO cobalt transport 100.0 2E-39 4.3E-44 330.0 24.6 203 366-572 1-224 (274)
194 PRK11432 fbpC ferric transport 100.0 1.1E-39 2.4E-44 341.4 22.9 208 72-285 6-225 (351)
195 PRK14247 phosphate ABC transpo 100.0 2.4E-39 5.2E-44 325.4 24.5 204 365-572 2-234 (250)
196 PRK13651 cobalt transporter AT 100.0 2.3E-39 4.9E-44 333.7 24.8 214 72-286 2-254 (305)
197 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.3E-39 5E-44 360.6 26.8 206 365-574 3-250 (552)
198 TIGR03873 F420-0_ABC_ATP propo 100.0 2.3E-39 4.9E-44 326.7 24.2 201 367-572 2-226 (256)
199 COG0411 LivG ABC-type branched 100.0 3.4E-40 7.4E-45 316.2 16.9 210 72-287 4-240 (250)
200 TIGR03740 galliderm_ABC gallid 100.0 2E-39 4.2E-44 320.5 22.8 198 367-569 1-210 (223)
201 TIGR01288 nodI ATP-binding ABC 100.0 2E-39 4.3E-44 334.7 23.6 207 72-284 4-222 (303)
202 cd03226 ABC_cobalt_CbiO_domain 100.0 6.5E-40 1.4E-44 319.7 18.9 197 74-275 1-205 (205)
203 PRK14268 phosphate ABC transpo 100.0 3.9E-39 8.4E-44 325.4 25.0 205 363-572 9-242 (258)
204 cd03265 ABC_DrrA DrrA is the A 100.0 1.9E-39 4E-44 319.9 22.0 203 73-281 1-216 (220)
205 PRK13633 cobalt transporter AT 100.0 3E-39 6.6E-44 329.8 24.2 204 365-572 3-233 (280)
206 PRK13643 cbiO cobalt transport 100.0 3.8E-39 8.2E-44 330.2 24.9 214 72-286 1-233 (288)
207 PRK11144 modC molybdate transp 100.0 3.7E-39 7.9E-44 338.8 25.4 200 366-573 1-219 (352)
208 PRK15056 manganese/iron transp 100.0 3.4E-39 7.4E-44 328.1 24.4 204 365-571 5-229 (272)
209 PRK11650 ugpC glycerol-3-phosp 100.0 1.4E-39 3E-44 341.5 22.1 208 72-285 3-223 (356)
210 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.8E-39 6E-44 316.7 22.7 190 367-562 1-209 (211)
211 TIGR03265 PhnT2 putative 2-ami 100.0 1.9E-39 4.1E-44 340.1 22.7 208 72-285 4-223 (353)
212 PRK13632 cbiO cobalt transport 100.0 4.3E-39 9.3E-44 327.2 24.4 206 363-572 4-231 (271)
213 PRK14267 phosphate ABC transpo 100.0 5.1E-39 1.1E-43 323.6 24.6 204 365-572 3-237 (253)
214 PRK14273 phosphate ABC transpo 100.0 5.3E-39 1.2E-43 323.6 24.8 204 364-572 5-238 (254)
215 COG4152 ABC-type uncharacteriz 100.0 5.8E-40 1.3E-44 312.1 16.5 207 366-577 2-224 (300)
216 PRK13634 cbiO cobalt transport 100.0 5.4E-39 1.2E-43 329.4 24.9 209 72-285 2-234 (290)
217 TIGR01186 proV glycine betaine 100.0 2E-39 4.4E-44 339.6 22.2 193 375-572 2-219 (363)
218 PRK14248 phosphate ABC transpo 100.0 8.1E-39 1.8E-43 324.8 25.7 205 363-572 18-252 (268)
219 PRK10744 pstB phosphate transp 100.0 8.3E-39 1.8E-43 323.3 25.5 205 363-572 10-244 (260)
220 PRK14235 phosphate transporter 100.0 9.8E-39 2.1E-43 323.9 26.0 205 363-572 16-251 (267)
221 COG1137 YhbG ABC-type (unclass 100.0 2E-40 4.4E-45 306.6 12.3 204 365-573 3-229 (243)
222 PRK11147 ABC transporter ATPas 100.0 7.4E-39 1.6E-43 361.5 27.8 204 365-574 2-245 (635)
223 cd03254 ABCC_Glucan_exporter_l 100.0 6.1E-39 1.3E-43 318.2 23.8 200 367-572 3-226 (229)
224 COG0410 LivF ABC-type branched 100.0 6.1E-39 1.3E-43 305.3 22.6 205 365-573 2-227 (237)
225 cd03256 ABC_PhnC_transporter A 100.0 3.5E-39 7.6E-44 322.3 21.9 206 73-284 1-232 (241)
226 TIGR03522 GldA_ABC_ATP gliding 100.0 6.2E-39 1.3E-43 330.7 24.3 207 72-284 2-219 (301)
227 PRK13641 cbiO cobalt transport 100.0 6.1E-39 1.3E-43 328.6 24.0 209 72-285 2-233 (287)
228 TIGR03258 PhnT 2-aminoethylpho 100.0 3.4E-39 7.3E-44 338.8 22.6 208 72-285 5-227 (362)
229 TIGR02315 ABC_phnC phosphonate 100.0 4E-39 8.7E-44 322.4 21.9 207 72-284 1-233 (243)
230 COG0444 DppD ABC-type dipeptid 100.0 3E-39 6.5E-44 322.6 20.9 213 73-286 2-243 (316)
231 PRK13637 cbiO cobalt transport 100.0 5.6E-39 1.2E-43 328.8 23.4 210 72-286 2-234 (287)
232 cd03260 ABC_PstB_phosphate_tra 100.0 5.3E-39 1.1E-43 318.2 22.4 203 73-281 1-224 (227)
233 COG0444 DppD ABC-type dipeptid 100.0 4.6E-39 1E-43 321.2 22.0 207 366-573 1-244 (316)
234 PRK15439 autoinducer 2 ABC tra 100.0 8.3E-39 1.8E-43 352.9 26.3 204 364-572 9-229 (510)
235 PRK11247 ssuB aliphatic sulfon 100.0 4.2E-39 9.1E-44 324.1 21.8 201 71-280 11-217 (257)
236 cd03252 ABCC_Hemolysin The ABC 100.0 1E-38 2.2E-43 318.3 24.3 201 367-573 1-226 (237)
237 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.3E-39 4.9E-44 318.8 19.4 196 73-274 1-218 (218)
238 cd03269 ABC_putative_ATPase Th 100.0 8.3E-39 1.8E-43 313.0 23.1 198 73-276 1-208 (210)
239 TIGR02673 FtsE cell division A 100.0 3.5E-39 7.5E-44 316.6 20.2 201 72-273 1-214 (214)
240 cd03296 ABC_CysA_sulfate_impor 100.0 4.5E-39 9.8E-44 321.2 21.3 207 72-284 2-224 (239)
241 PRK11831 putative ABC transpor 100.0 5.7E-39 1.2E-43 326.0 22.4 213 71-285 6-232 (269)
242 PRK09452 potA putrescine/sperm 100.0 5.6E-39 1.2E-43 338.3 23.0 209 71-285 13-233 (375)
243 PRK11153 metN DL-methionine tr 100.0 1.1E-38 2.4E-43 334.0 25.1 208 72-285 1-229 (343)
244 TIGR01277 thiQ thiamine ABC tr 100.0 1E-38 2.2E-43 313.1 23.3 193 367-566 1-212 (213)
245 cd03225 ABC_cobalt_CbiO_domain 100.0 3.2E-39 6.9E-44 316.2 19.6 195 74-273 1-211 (211)
246 PRK14259 phosphate ABC transpo 100.0 1.5E-38 3.3E-43 322.7 25.3 205 363-572 10-253 (269)
247 COG4181 Predicted ABC-type tra 100.0 3.5E-39 7.5E-44 291.1 18.0 192 366-561 6-225 (228)
248 PRK10851 sulfate/thiosulfate t 100.0 5.2E-39 1.1E-43 336.8 22.4 208 72-285 2-225 (353)
249 cd03245 ABCC_bacteriocin_expor 100.0 9.4E-39 2E-43 314.9 22.9 192 367-562 3-218 (220)
250 PRK11000 maltose/maltodextrin 100.0 5.3E-39 1.1E-43 339.2 22.5 208 72-285 3-222 (369)
251 PRK13646 cbiO cobalt transport 100.0 1.6E-38 3.4E-43 325.4 25.2 210 72-286 2-235 (286)
252 PRK14241 phosphate transporter 100.0 1.7E-38 3.7E-43 320.7 25.1 204 365-572 3-242 (258)
253 PRK13647 cbiO cobalt transport 100.0 7.4E-39 1.6E-43 325.8 22.7 206 72-283 4-224 (274)
254 cd03300 ABC_PotA_N PotA is an 100.0 1.2E-38 2.5E-43 316.8 23.5 201 367-572 1-220 (232)
255 PRK11264 putative amino-acid A 100.0 1.1E-38 2.3E-43 320.6 23.5 212 72-285 3-232 (250)
256 TIGR03415 ABC_choXWV_ATP choli 100.0 1.1E-38 2.3E-43 335.7 24.4 196 371-571 29-253 (382)
257 PRK15079 oligopeptide ABC tran 100.0 1.2E-38 2.5E-43 331.6 24.4 209 72-285 8-250 (331)
258 cd03301 ABC_MalK_N The N-termi 100.0 3E-39 6.5E-44 316.8 18.9 200 73-277 1-212 (213)
259 cd03266 ABC_NatA_sodium_export 100.0 7.4E-39 1.6E-43 315.2 21.7 200 72-276 1-216 (218)
260 PRK14269 phosphate ABC transpo 100.0 1.7E-38 3.8E-43 318.4 24.7 202 366-572 2-230 (246)
261 PRK10619 histidine/lysine/argi 100.0 1.1E-38 2.4E-43 321.8 23.4 209 72-285 5-240 (257)
262 cd03258 ABC_MetN_methionine_tr 100.0 1.4E-38 3E-43 316.5 23.7 211 72-284 1-228 (233)
263 PRK13648 cbiO cobalt transport 100.0 1.5E-38 3.2E-43 323.0 24.3 205 364-572 5-231 (269)
264 PRK14254 phosphate ABC transpo 100.0 2.8E-38 6E-43 323.2 26.5 205 363-572 36-269 (285)
265 COG4559 ABC-type hemin transpo 100.0 5E-39 1.1E-43 300.0 19.0 202 366-572 1-230 (259)
266 PRK13640 cbiO cobalt transport 100.0 1.6E-38 3.6E-43 324.6 24.7 205 364-572 3-232 (282)
267 PRK14245 phosphate ABC transpo 100.0 1.8E-38 3.9E-43 319.0 24.6 203 365-572 2-234 (250)
268 PRK14274 phosphate ABC transpo 100.0 1.8E-38 3.8E-43 320.7 24.6 205 363-572 9-243 (259)
269 PRK14270 phosphate ABC transpo 100.0 2E-38 4.4E-43 318.9 24.9 204 364-572 2-235 (251)
270 PRK14239 phosphate transporter 100.0 2.7E-38 5.8E-43 318.1 25.7 204 364-572 3-236 (252)
271 PRK13638 cbiO cobalt transport 100.0 8.7E-39 1.9E-43 325.0 22.3 208 72-285 1-224 (271)
272 PRK13631 cbiO cobalt transport 100.0 1.6E-38 3.5E-43 329.3 24.7 215 71-286 20-265 (320)
273 PRK14250 phosphate ABC transpo 100.0 1.7E-38 3.7E-43 317.4 24.0 208 72-284 3-219 (241)
274 cd03235 ABC_Metallic_Cations A 100.0 5.9E-39 1.3E-43 314.8 20.3 194 74-274 1-210 (213)
275 PRK09700 D-allose transporter 100.0 8.5E-39 1.8E-43 353.3 23.9 203 364-571 3-233 (510)
276 PRK09536 btuD corrinoid ABC tr 100.0 7.3E-39 1.6E-43 339.4 22.3 208 72-285 3-227 (402)
277 PRK10247 putative ABC transpor 100.0 1.2E-38 2.6E-43 315.2 22.5 192 364-560 5-217 (225)
278 cd03219 ABC_Mj1267_LivG_branch 100.0 1.3E-38 2.8E-43 317.2 22.9 206 73-284 1-230 (236)
279 PRK09493 glnQ glutamine ABC tr 100.0 1.6E-38 3.4E-43 317.6 23.4 208 72-285 1-224 (240)
280 PRK13543 cytochrome c biogenes 100.0 1.6E-38 3.6E-43 311.9 23.1 191 363-557 8-212 (214)
281 PRK10908 cell division protein 100.0 1.2E-38 2.5E-43 314.7 22.2 199 72-275 1-216 (222)
282 PRK14256 phosphate ABC transpo 100.0 2.8E-38 6.2E-43 318.0 25.4 203 366-572 4-236 (252)
283 PRK10261 glutathione transport 100.0 9.3E-39 2E-43 359.7 24.3 208 363-571 9-257 (623)
284 PRK13642 cbiO cobalt transport 100.0 2.3E-38 5.1E-43 322.7 24.9 204 365-572 3-229 (277)
285 PRK11022 dppD dipeptide transp 100.0 1.5E-38 3.2E-43 330.6 23.8 213 72-285 3-242 (326)
286 PRK14251 phosphate ABC transpo 100.0 2.1E-38 4.6E-43 318.7 24.2 202 365-571 3-234 (251)
287 cd03262 ABC_HisP_GlnQ_permease 100.0 1.2E-38 2.5E-43 312.6 21.8 201 73-274 1-213 (213)
288 PRK14275 phosphate ABC transpo 100.0 2.3E-38 5.1E-43 324.0 24.7 205 363-572 36-270 (286)
289 cd03297 ABC_ModC_molybdenum_tr 100.0 1.4E-38 3.1E-43 312.3 22.2 188 367-562 2-212 (214)
290 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.8E-39 1.3E-43 316.4 19.5 197 73-276 1-214 (220)
291 PRK10762 D-ribose transporter 100.0 9.2E-39 2E-43 352.1 23.3 201 365-570 3-228 (501)
292 PRK13547 hmuV hemin importer A 100.0 2.9E-38 6.3E-43 320.6 25.1 201 366-571 1-243 (272)
293 PRK15134 microcin C ABC transp 100.0 1.6E-38 3.6E-43 352.4 25.4 207 364-571 3-245 (529)
294 COG2274 SunT ABC-type bacterio 100.0 6.3E-39 1.4E-43 359.1 22.1 204 365-573 470-697 (709)
295 cd03268 ABC_BcrA_bacitracin_re 100.0 1.6E-38 3.4E-43 310.6 22.1 197 73-276 1-206 (208)
296 cd03218 ABC_YhbG The ABC trans 100.0 1.5E-38 3.3E-43 316.0 22.3 206 73-284 1-220 (232)
297 PRK14237 phosphate transporter 100.0 4.3E-38 9.4E-43 319.2 26.0 205 363-572 17-251 (267)
298 cd03264 ABC_drug_resistance_li 100.0 1.4E-38 3E-43 311.7 21.5 198 73-276 1-209 (211)
299 PRK11308 dppF dipeptide transp 100.0 2.6E-38 5.6E-43 328.7 24.7 209 72-285 5-243 (327)
300 cd03263 ABC_subfamily_A The AB 100.0 1.8E-38 4E-43 312.8 22.5 204 73-282 1-217 (220)
301 PRK11124 artP arginine transpo 100.0 2.2E-38 4.8E-43 316.9 23.3 207 72-284 2-228 (242)
302 cd03223 ABCD_peroxisomal_ALDP 100.0 2E-38 4.3E-43 298.7 21.4 164 367-559 1-164 (166)
303 PRK11248 tauB taurine transpor 100.0 8.9E-39 1.9E-43 321.9 20.1 199 72-276 1-211 (255)
304 PRK14262 phosphate ABC transpo 100.0 4.1E-38 8.9E-43 316.4 24.8 203 365-572 2-234 (250)
305 cd03257 ABC_NikE_OppD_transpor 100.0 1.4E-38 3.1E-43 315.2 21.1 201 72-276 1-226 (228)
306 PRK14265 phosphate ABC transpo 100.0 5.4E-38 1.2E-42 319.5 25.9 205 363-572 17-258 (274)
307 PRK11607 potG putrescine trans 100.0 1.6E-38 3.6E-43 335.3 22.8 209 71-285 18-238 (377)
308 TIGR02142 modC_ABC molybdenum 100.0 2.7E-38 5.9E-43 332.6 24.5 195 371-572 4-221 (354)
309 cd03253 ABCC_ATM1_transporter 100.0 4.1E-38 8.8E-43 313.7 24.3 200 367-572 1-224 (236)
310 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.5E-38 7.6E-43 314.6 23.9 201 367-573 1-227 (238)
311 PRK13636 cbiO cobalt transport 100.0 2.9E-38 6.2E-43 323.0 23.8 209 72-286 5-231 (283)
312 PRK14242 phosphate transporter 100.0 2.3E-38 5E-43 318.8 22.7 209 72-285 6-236 (253)
313 TIGR00972 3a0107s01c2 phosphat 100.0 3.8E-38 8.3E-43 316.1 24.1 209 72-285 1-231 (247)
314 PRK14272 phosphate ABC transpo 100.0 4.6E-38 9.9E-43 316.5 24.7 203 366-572 4-236 (252)
315 PRK15112 antimicrobial peptide 100.0 2.3E-38 4.9E-43 321.3 22.5 209 72-285 4-238 (267)
316 PRK11701 phnK phosphonate C-P 100.0 3.7E-38 8E-43 318.2 23.9 209 72-285 6-240 (258)
317 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.1E-38 6.8E-43 315.8 23.2 207 73-284 1-223 (242)
318 CHL00131 ycf16 sulfate ABC tra 100.0 5.2E-38 1.1E-42 316.1 24.9 201 364-568 5-237 (252)
319 PRK14243 phosphate transporter 100.0 4.8E-38 1.1E-42 318.3 24.7 204 364-572 8-248 (264)
320 TIGR02324 CP_lyasePhnL phospho 100.0 2.7E-38 5.9E-43 312.5 22.3 188 366-555 1-222 (224)
321 cd03299 ABC_ModC_like Archeal 100.0 4.6E-38 9.9E-43 313.2 24.0 200 367-572 1-219 (235)
322 cd03251 ABCC_MsbA MsbA is an e 100.0 4.3E-38 9.2E-43 313.1 23.8 201 367-573 1-226 (234)
323 cd03292 ABC_FtsE_transporter F 100.0 3.1E-38 6.8E-43 309.8 22.5 197 73-274 1-214 (214)
324 PRK14271 phosphate ABC transpo 100.0 5.7E-38 1.2E-42 319.5 25.1 204 364-572 19-251 (276)
325 TIGR03411 urea_trans_UrtD urea 100.0 2.9E-38 6.3E-43 316.0 22.5 208 72-285 2-230 (242)
326 PRK09984 phosphonate/organopho 100.0 3.8E-38 8.2E-43 318.9 23.6 210 72-284 4-240 (262)
327 COG4598 HisP ABC-type histidin 100.0 3.7E-39 8E-44 292.9 14.4 204 364-572 4-241 (256)
328 PRK13645 cbiO cobalt transport 100.0 3.3E-38 7.1E-43 323.7 23.4 213 72-285 6-239 (289)
329 PRK15093 antimicrobial peptide 100.0 3.5E-38 7.5E-43 328.7 23.6 213 72-285 3-247 (330)
330 cd03214 ABC_Iron-Siderophores_ 100.0 1.6E-38 3.6E-43 303.4 19.4 174 368-562 1-178 (180)
331 TIGR02323 CP_lyasePhnK phospho 100.0 7.8E-38 1.7E-42 315.0 25.4 209 72-285 3-237 (253)
332 PRK14240 phosphate transporter 100.0 5.5E-38 1.2E-42 315.5 24.2 202 366-572 3-234 (250)
333 TIGR00968 3a0106s01 sulfate AB 100.0 4.8E-38 1E-42 313.4 23.5 201 367-572 1-220 (237)
334 PRK13649 cbiO cobalt transport 100.0 3.4E-38 7.5E-43 322.2 23.0 209 72-285 2-233 (280)
335 PRK13549 xylose transporter AT 100.0 2.7E-38 6E-43 348.7 23.9 202 364-570 3-230 (506)
336 PRK14246 phosphate ABC transpo 100.0 5.5E-38 1.2E-42 316.5 24.1 206 363-572 7-241 (257)
337 cd03224 ABC_TM1139_LivF_branch 100.0 3.5E-38 7.7E-43 311.2 22.1 206 73-284 1-219 (222)
338 TIGR01188 drrA daunorubicin re 100.0 2.7E-38 5.9E-43 326.1 22.1 199 80-284 1-211 (302)
339 PRK13538 cytochrome c biogenes 100.0 2.7E-38 5.8E-43 308.1 20.8 186 366-555 1-202 (204)
340 COG4152 ABC-type uncharacteriz 100.0 1.2E-38 2.7E-43 303.1 17.9 206 72-284 2-217 (300)
341 TIGR02769 nickel_nikE nickel i 100.0 2.8E-38 6.1E-43 320.3 21.8 209 72-285 2-239 (265)
342 PRK10895 lipopolysaccharide AB 100.0 5.6E-38 1.2E-42 313.7 23.6 208 72-285 3-225 (241)
343 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.4E-38 9.4E-43 313.5 22.8 207 72-285 1-220 (236)
344 PRK14268 phosphate ABC transpo 100.0 6E-38 1.3E-42 316.7 23.9 209 72-285 12-241 (258)
345 PRK14249 phosphate ABC transpo 100.0 1E-37 2.3E-42 313.7 25.4 203 365-572 3-235 (251)
346 PRK14255 phosphate ABC transpo 100.0 1E-37 2.2E-42 314.0 25.1 203 364-571 3-235 (252)
347 PRK14244 phosphate ABC transpo 100.0 7.1E-38 1.5E-42 314.9 23.8 201 367-572 6-237 (251)
348 PRK14236 phosphate transporter 100.0 1.2E-37 2.5E-42 316.9 25.6 204 364-572 23-256 (272)
349 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 4.3E-38 9.3E-43 311.0 21.6 191 367-562 23-222 (224)
350 PRK09580 sufC cysteine desulfu 100.0 1.3E-37 2.8E-42 312.4 25.4 201 366-570 1-233 (248)
351 PRK14253 phosphate ABC transpo 100.0 8.8E-38 1.9E-42 313.8 24.1 203 365-572 2-233 (249)
352 COG1123 ATPase components of v 100.0 5.7E-38 1.2E-42 334.8 24.0 209 365-574 4-246 (539)
353 PRK13650 cbiO cobalt transport 100.0 6.9E-38 1.5E-42 319.5 23.6 207 72-285 4-228 (279)
354 PRK11231 fecE iron-dicitrate t 100.0 8.4E-38 1.8E-42 315.1 23.9 207 72-284 2-225 (255)
355 PRK10575 iron-hydroxamate tran 100.0 8E-38 1.7E-42 317.0 23.8 207 72-284 11-235 (265)
356 PRK14238 phosphate transporter 100.0 8.1E-38 1.7E-42 317.8 23.8 203 364-572 22-255 (271)
357 PRK10744 pstB phosphate transp 100.0 7.3E-38 1.6E-42 316.4 23.4 210 71-285 12-243 (260)
358 TIGR02211 LolD_lipo_ex lipopro 100.0 3.8E-38 8.3E-43 310.8 20.8 197 73-275 2-220 (221)
359 TIGR01978 sufC FeS assembly AT 100.0 8.2E-38 1.8E-42 312.8 23.5 207 73-284 1-232 (243)
360 PRK10938 putative molybdenum t 100.0 3.8E-38 8.3E-43 346.5 23.1 201 366-571 3-223 (490)
361 cd03231 ABC_CcmA_heme_exporter 100.0 6E-38 1.3E-42 304.8 21.7 185 367-555 1-198 (201)
362 PRK14258 phosphate ABC transpo 100.0 1.5E-37 3.3E-42 314.2 25.4 203 365-572 6-245 (261)
363 cd03267 ABC_NatA_like Similar 100.0 4.8E-38 1E-42 313.2 21.4 180 380-561 34-233 (236)
364 PRK13652 cbiO cobalt transport 100.0 7E-38 1.5E-42 319.2 23.0 209 72-286 3-227 (277)
365 TIGR03005 ectoine_ehuA ectoine 100.0 7E-38 1.5E-42 315.1 22.6 211 73-285 1-235 (252)
366 PRK11300 livG leucine/isoleuci 100.0 9.4E-38 2E-42 314.7 23.4 208 72-285 5-242 (255)
367 cd03244 ABCC_MRP_domain2 Domai 100.0 9.1E-38 2E-42 308.1 22.7 194 367-566 3-220 (221)
368 PRK13639 cbiO cobalt transport 100.0 1.1E-37 2.3E-42 317.6 23.7 209 72-286 1-226 (275)
369 TIGR02982 heterocyst_DevA ABC 100.0 1.1E-37 2.3E-42 307.4 22.9 191 366-560 1-219 (220)
370 TIGR02770 nickel_nikD nickel i 100.0 7.7E-38 1.7E-42 310.5 22.0 190 382-572 1-215 (230)
371 PRK11288 araG L-arabinose tran 100.0 7.8E-38 1.7E-42 344.8 24.3 194 365-562 3-220 (501)
372 PRK13545 tagH teichoic acids e 100.0 1.8E-37 3.9E-42 332.3 26.2 206 363-574 18-234 (549)
373 PRK14267 phosphate ABC transpo 100.0 8.5E-38 1.8E-42 314.7 22.5 210 71-285 3-236 (253)
374 COG4175 ProV ABC-type proline/ 100.0 5.5E-38 1.2E-42 308.6 20.4 187 382-572 43-254 (386)
375 PRK14273 phosphate ABC transpo 100.0 1.1E-37 2.5E-42 313.9 23.4 213 72-285 7-237 (254)
376 TIGR02633 xylG D-xylose ABC tr 100.0 6E-38 1.3E-42 345.8 23.3 201 366-570 1-228 (500)
377 PRK11614 livF leucine/isoleuci 100.0 9.8E-38 2.1E-42 311.2 22.6 208 72-285 5-225 (237)
378 TIGR03608 L_ocin_972_ABC putat 100.0 6.2E-38 1.3E-42 305.9 20.6 182 369-555 1-206 (206)
379 PRK14235 phosphate transporter 100.0 9.7E-38 2.1E-42 316.6 22.8 209 72-285 19-250 (267)
380 COG4598 HisP ABC-type histidin 100.0 6.9E-38 1.5E-42 284.6 19.2 213 72-287 6-242 (256)
381 PRK09473 oppD oligopeptide tra 100.0 2.3E-37 5.1E-42 321.9 26.0 213 71-285 11-250 (330)
382 PRK10584 putative ABC transpor 100.0 1.1E-37 2.5E-42 308.9 22.4 203 71-275 5-225 (228)
383 PRK14261 phosphate ABC transpo 100.0 2.5E-37 5.3E-42 311.3 25.1 204 364-572 4-237 (253)
384 PRK14260 phosphate ABC transpo 100.0 2.1E-37 4.6E-42 312.8 24.5 203 365-572 6-243 (259)
385 KOG0058 Peptide exporter, ABC 100.0 3.6E-38 7.8E-43 340.8 20.0 203 365-572 464-691 (716)
386 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1E-37 2.2E-42 356.4 24.9 201 366-572 451-673 (686)
387 PRK10253 iron-enterobactin tra 100.0 1.7E-37 3.6E-42 314.6 23.7 207 72-284 7-231 (265)
388 PRK14271 phosphate ABC transpo 100.0 2.1E-37 4.6E-42 315.3 24.6 216 69-285 18-250 (276)
389 PRK14248 phosphate ABC transpo 100.0 1.4E-37 3E-42 315.8 23.1 210 71-285 20-251 (268)
390 PRK13548 hmuV hemin importer A 100.0 8.1E-38 1.8E-42 315.6 21.1 207 72-284 2-228 (258)
391 PRK14264 phosphate ABC transpo 100.0 2.8E-37 6.1E-42 318.8 25.6 210 358-572 37-289 (305)
392 PRK13644 cbiO cobalt transport 100.0 1.4E-37 3E-42 316.5 22.9 207 72-285 1-223 (274)
393 cd03221 ABCF_EF-3 ABCF_EF-3 E 100.0 1.5E-37 3.2E-42 285.8 20.9 144 367-559 1-144 (144)
394 cd03230 ABC_DR_subfamily_A Thi 100.0 1.2E-37 2.7E-42 295.4 21.0 160 367-560 1-173 (173)
395 TIGR03410 urea_trans_UrtE urea 100.0 8.5E-38 1.8E-42 310.2 20.8 208 73-284 1-219 (230)
396 cd03215 ABC_Carb_Monos_II This 100.0 9.2E-38 2E-42 298.8 20.2 165 364-560 2-182 (182)
397 cd03248 ABCC_TAP TAP, the Tran 100.0 1.6E-37 3.5E-42 307.4 22.6 192 364-560 9-226 (226)
398 COG4988 CydD ABC-type transpor 100.0 9.5E-38 2.1E-42 331.8 22.1 203 365-572 319-543 (559)
399 cd03216 ABC_Carb_Monos_I This 100.0 1.7E-37 3.7E-42 291.5 21.4 158 367-561 1-161 (163)
400 PRK14241 phosphate transporter 100.0 3.1E-37 6.6E-42 311.5 24.6 209 72-285 4-241 (258)
401 PRK14269 phosphate ABC transpo 100.0 1.9E-37 4.1E-42 310.8 23.0 209 72-285 2-229 (246)
402 PRK11629 lolD lipoprotein tran 100.0 1.5E-37 3.3E-42 309.0 22.1 199 72-276 5-225 (233)
403 PRK14245 phosphate ABC transpo 100.0 2.6E-37 5.7E-42 310.6 24.0 209 72-285 3-233 (250)
404 PRK14274 phosphate ABC transpo 100.0 2.2E-37 4.7E-42 312.8 23.5 211 70-285 10-242 (259)
405 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.6E-37 5.7E-42 313.4 23.9 198 367-572 3-225 (275)
406 PRK11174 cysteine/glutathione 100.0 1.3E-37 2.9E-42 349.8 24.1 201 366-572 349-572 (588)
407 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.2E-37 2.7E-42 357.1 24.2 203 365-572 476-700 (710)
408 PRK10070 glycine betaine trans 100.0 1.2E-37 2.6E-42 330.0 22.1 198 86-285 42-253 (400)
409 PRK14247 phosphate ABC transpo 100.0 2.7E-37 5.8E-42 310.5 23.5 209 72-285 3-233 (250)
410 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 7.5E-38 1.6E-42 309.3 19.0 195 73-276 23-222 (224)
411 TIGR03269 met_CoM_red_A2 methy 100.0 2.1E-37 4.5E-42 343.0 24.5 204 367-574 1-260 (520)
412 PRK13635 cbiO cobalt transport 100.0 2.3E-37 4.9E-42 315.6 22.6 207 72-285 5-228 (279)
413 PRK14257 phosphate ABC transpo 100.0 5.1E-37 1.1E-41 319.1 25.5 205 364-572 78-313 (329)
414 cd03234 ABCG_White The White s 100.0 2.6E-37 5.6E-42 305.9 22.1 194 366-562 3-224 (226)
415 PRK14252 phosphate ABC transpo 100.0 6.9E-37 1.5E-41 310.1 25.7 204 364-572 14-249 (265)
416 PRK14265 phosphate ABC transpo 100.0 4.8E-37 1E-41 312.5 24.6 218 67-285 15-257 (274)
417 PRK14237 phosphate transporter 100.0 3.7E-37 8E-42 312.4 23.7 212 69-285 17-250 (267)
418 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.1E-37 2.5E-42 316.3 19.9 206 74-285 26-249 (269)
419 TIGR03873 F420-0_ABC_ATP propo 100.0 2.9E-37 6.3E-42 311.3 22.6 206 73-284 2-224 (256)
420 COG4987 CydC ABC-type transpor 100.0 7.6E-38 1.7E-42 327.4 18.9 202 366-572 336-561 (573)
421 KOG0057 Mitochondrial Fe/S clu 100.0 2.2E-37 4.8E-42 324.1 22.3 203 364-572 349-574 (591)
422 TIGR01184 ntrCD nitrate transp 100.0 1.1E-37 2.4E-42 309.4 19.1 181 383-567 1-199 (230)
423 PRK14240 phosphate transporter 100.0 3.6E-37 7.7E-42 309.6 23.0 208 72-284 3-232 (250)
424 PRK10418 nikD nickel transport 100.0 2.6E-37 5.6E-42 311.3 21.9 208 72-285 4-229 (254)
425 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.2E-37 2.7E-42 304.9 18.9 197 73-276 1-209 (211)
426 PRK13633 cobalt transporter AT 100.0 4.9E-37 1.1E-41 313.5 24.1 207 72-285 4-232 (280)
427 PRK14256 phosphate ABC transpo 100.0 3.5E-37 7.6E-42 310.0 22.7 209 72-285 4-235 (252)
428 PRK13539 cytochrome c biogenes 100.0 3E-37 6.6E-42 301.3 21.5 186 366-557 2-200 (207)
429 cd03214 ABC_Iron-Siderophores_ 100.0 1.3E-37 2.9E-42 297.2 18.4 171 74-276 1-178 (180)
430 PRK14263 phosphate ABC transpo 100.0 1E-36 2.2E-41 307.9 26.0 204 364-572 6-245 (261)
431 PRK14259 phosphate ABC transpo 100.0 5.3E-37 1.2E-41 311.5 23.9 208 71-285 12-252 (269)
432 PRK14251 phosphate ABC transpo 100.0 3.9E-37 8.4E-42 309.5 22.7 208 72-284 4-233 (251)
433 COG1119 ModF ABC-type molybden 100.0 8.2E-38 1.8E-42 299.7 16.8 200 363-565 28-255 (257)
434 cd03247 ABCC_cytochrome_bd The 100.0 4.2E-37 9.2E-42 293.2 21.7 163 367-562 1-176 (178)
435 cd03246 ABCC_Protease_Secretio 100.0 2.6E-37 5.6E-42 293.2 20.1 158 367-560 1-173 (173)
436 cd03245 ABCC_bacteriocin_expor 100.0 3.4E-37 7.3E-42 303.8 21.4 199 72-276 2-218 (220)
437 TIGR03740 galliderm_ABC gallid 100.0 9.6E-38 2.1E-42 308.4 17.5 200 73-281 1-208 (223)
438 PRK13546 teichoic acids export 100.0 9.8E-37 2.1E-41 308.0 25.2 189 379-573 36-233 (264)
439 PRK14270 phosphate ABC transpo 100.0 4.9E-37 1.1E-41 308.8 22.9 209 71-284 3-233 (251)
440 PRK14238 phosphate transporter 100.0 5.3E-37 1.1E-41 311.8 23.3 213 68-285 20-254 (271)
441 PRK14236 phosphate transporter 100.0 5.6E-37 1.2E-41 311.9 23.5 219 62-285 15-255 (272)
442 PRK10247 putative ABC transpor 100.0 2.3E-37 5.1E-42 306.0 20.2 198 72-274 7-217 (225)
443 cd03229 ABC_Class3 This class 100.0 3.6E-37 7.9E-42 293.6 20.6 161 367-559 1-178 (178)
444 COG1137 YhbG ABC-type (unclass 100.0 3.9E-38 8.4E-43 291.5 13.3 210 72-287 4-229 (243)
445 PRK14253 phosphate ABC transpo 100.0 5.4E-37 1.2E-41 308.1 22.8 212 72-284 3-231 (249)
446 cd03250 ABCC_MRP_domain1 Domai 100.0 5.7E-37 1.2E-41 298.7 22.3 185 367-559 1-204 (204)
447 cd03297 ABC_ModC_molybdenum_tr 100.0 4.8E-37 1E-41 301.5 21.9 192 77-276 5-212 (214)
448 COG4608 AppF ABC-type oligopep 100.0 2.1E-37 4.5E-42 303.2 19.1 186 364-572 2-199 (268)
449 PRK10982 galactose/methyl gala 100.0 2.9E-37 6.2E-42 339.5 22.7 197 369-570 1-221 (491)
450 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.2E-36 2.5E-41 297.2 24.3 188 365-566 5-206 (207)
451 COG4604 CeuD ABC-type enteroch 100.0 5E-38 1.1E-42 289.9 13.8 204 366-572 1-225 (252)
452 TIGR01186 proV glycine betaine 100.0 2.1E-37 4.6E-42 324.4 20.3 201 80-286 1-219 (363)
453 PRK10771 thiQ thiamine transpo 100.0 4.1E-37 9E-42 305.7 21.4 207 72-286 1-219 (232)
454 PRK14262 phosphate ABC transpo 100.0 7E-37 1.5E-41 307.5 23.3 208 72-284 3-232 (250)
455 TIGR03375 type_I_sec_LssB type 100.0 4.3E-37 9.4E-42 351.6 24.6 206 365-575 462-691 (694)
456 PRK10419 nikE nickel transport 100.0 7.1E-37 1.5E-41 310.4 23.4 207 72-283 3-238 (268)
457 cd03237 ABC_RNaseL_inhibitor_d 100.0 4.3E-37 9.4E-42 307.5 21.5 195 374-572 1-207 (246)
458 PRK14275 phosphate ABC transpo 100.0 8.5E-37 1.8E-41 312.5 24.1 211 70-285 37-269 (286)
459 PRK11144 modC molybdate transp 100.0 2.7E-37 5.9E-42 324.6 20.9 201 72-285 1-217 (352)
460 PRK14239 phosphate transporter 100.0 8.4E-37 1.8E-41 307.3 23.5 209 72-285 5-235 (252)
461 PRK14254 phosphate ABC transpo 100.0 6.4E-37 1.4E-41 313.1 22.9 209 70-284 37-267 (285)
462 PRK09544 znuC high-affinity zi 100.0 3.4E-37 7.5E-42 309.4 20.5 197 72-284 4-207 (251)
463 COG4175 ProV ABC-type proline/ 100.0 3.3E-37 7.1E-42 303.1 19.7 213 72-286 4-254 (386)
464 COG4608 AppF ABC-type oligopep 100.0 2.5E-37 5.3E-42 302.7 18.6 182 72-285 4-198 (268)
465 cd03254 ABCC_Glucan_exporter_l 100.0 6.5E-37 1.4E-41 303.6 21.8 207 72-285 2-225 (229)
466 PRK14272 phosphate ABC transpo 100.0 8E-37 1.7E-41 307.4 22.6 213 72-285 4-235 (252)
467 PRK13632 cbiO cobalt transport 100.0 4.9E-37 1.1E-41 312.1 21.2 207 72-285 7-230 (271)
468 PRK13547 hmuV hemin importer A 100.0 9.6E-37 2.1E-41 309.5 23.2 211 72-284 1-242 (272)
469 PRK14266 phosphate ABC transpo 100.0 1.5E-36 3.2E-41 305.1 24.2 202 366-572 3-234 (250)
470 PRK14244 phosphate ABC transpo 100.0 9.7E-37 2.1E-41 306.7 22.7 208 73-285 6-236 (251)
471 PRK14246 phosphate ABC transpo 100.0 1.1E-36 2.3E-41 307.1 23.0 213 72-285 10-240 (257)
472 PRK09580 sufC cysteine desulfu 100.0 1.3E-36 2.9E-41 305.1 23.5 206 72-282 1-231 (248)
473 COG3840 ThiQ ABC-type thiamine 100.0 3.2E-37 7E-42 281.2 17.2 205 72-286 1-219 (231)
474 PRK11176 lipid transporter ATP 100.0 5.3E-37 1.1E-41 344.6 23.0 202 366-572 341-567 (582)
475 PRK15056 manganese/iron transp 100.0 5.9E-37 1.3E-41 311.7 21.1 206 72-284 6-228 (272)
476 PRK14255 phosphate ABC transpo 100.0 8E-37 1.7E-41 307.4 21.8 207 71-282 4-232 (252)
477 COG1129 MglA ABC-type sugar tr 100.0 8.8E-37 1.9E-41 323.7 23.0 199 363-566 5-228 (500)
478 PRK13543 cytochrome c biogenes 100.0 3.3E-37 7.1E-42 302.6 18.4 195 71-271 10-212 (214)
479 PRK13640 cbiO cobalt transport 100.0 7.9E-37 1.7E-41 312.2 21.9 210 72-285 5-231 (282)
480 cd03300 ABC_PotA_N PotA is an 100.0 6.9E-37 1.5E-41 304.1 20.8 206 73-284 1-218 (232)
481 PRK10790 putative multidrug tr 100.0 9.4E-37 2E-41 343.1 24.6 201 365-571 339-562 (592)
482 COG4161 ArtP ABC-type arginine 100.0 8.5E-37 1.8E-41 272.9 19.1 212 72-285 2-229 (242)
483 COG0410 LivF ABC-type branched 100.0 9.7E-37 2.1E-41 290.2 20.4 210 72-286 3-226 (237)
484 TIGR01193 bacteriocin_ABC ABC- 100.0 7.8E-37 1.7E-41 350.3 23.8 202 366-572 473-697 (708)
485 PRK14249 phosphate ABC transpo 100.0 1.4E-36 3.1E-41 305.5 22.8 212 72-284 4-233 (251)
486 PRK14260 phosphate ABC transpo 100.0 1.5E-36 3.3E-41 306.6 23.0 213 72-285 7-242 (259)
487 cd03217 ABC_FeS_Assembly ABC-t 100.0 1.9E-36 4.1E-41 294.1 22.8 172 367-568 1-190 (200)
488 PRK13648 cbiO cobalt transport 100.0 1.2E-36 2.7E-41 308.9 22.5 207 72-285 7-230 (269)
489 COG4604 CeuD ABC-type enteroch 100.0 7E-38 1.5E-42 288.9 12.0 211 72-286 1-225 (252)
490 cd03288 ABCC_SUR2 The SUR doma 100.0 2.4E-36 5.2E-41 304.8 24.4 203 364-573 17-244 (257)
491 PRK11160 cysteine/glutathione 100.0 1.1E-36 2.4E-41 340.5 24.3 203 365-572 337-562 (574)
492 PRK14261 phosphate ABC transpo 100.0 1.3E-36 2.8E-41 306.1 22.3 213 72-285 6-236 (253)
493 TIGR02142 modC_ABC molybdenum 100.0 9.6E-37 2.1E-41 320.9 22.2 200 77-284 4-219 (354)
494 TIGR00958 3a01208 Conjugate Tr 100.0 1E-36 2.3E-41 348.4 24.1 203 365-572 477-702 (711)
495 KOG0055 Multidrug/pheromone ex 100.0 3.9E-37 8.5E-42 350.0 20.2 203 365-572 349-576 (1228)
496 PRK13642 cbiO cobalt transport 100.0 1.1E-36 2.3E-41 310.5 21.4 208 72-286 4-229 (277)
497 cd03290 ABCC_SUR1_N The SUR do 100.0 1.6E-36 3.6E-41 298.5 22.0 187 368-559 2-218 (218)
498 cd03213 ABCG_EPDR ABCG transpo 100.0 1.6E-36 3.6E-41 293.1 21.5 172 365-562 2-192 (194)
499 PRK14258 phosphate ABC transpo 100.0 2.2E-36 4.7E-41 305.8 23.2 213 72-285 7-244 (261)
500 PRK14243 phosphate transporter 100.0 1.8E-36 3.8E-41 306.9 22.4 208 72-285 10-247 (264)
No 1
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=4.8e-111 Score=872.29 Aligned_cols=578 Identities=63% Similarity=0.985 Sum_probs=505.9
Q ss_pred CCChHHHHHHHHHHHHHHHHcCCchhHHHhhh--hhHhhhcCchHHHHHHHHhh--ccccccccccccccCCCccceEEe
Q 007982 1 MVSDASKKKALQKKAAAAAKRGGKAAAAAASS--KAAALQNGSAADKAASEMAA--MQISDRTCTGVLCSHPLSRDIRIE 76 (582)
Q Consensus 1 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~i~v~ 76 (582)
||++++|.|+.+|++++.++++.++.....-+ ...++. ..+.+..+..... ..+..|+++|++.|+|.+++++++
T Consensus 1 ~~~~~~k~k~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vd~~~~~l~~~~~~~~~~~~tg~l~s~~~s~dvk~~ 79 (614)
T KOG0927|consen 1 MPSDASKLKSAAKKAAAKARKGRKSKPSRKPSTNVAAASE-ETEVDALADELESLELIAKARSVTGNLFSHPISRDVKIE 79 (614)
T ss_pred CccchHHHHHHHhhhhhccccccccCcccccCcccccccc-chhhHHHHhhhHHHHhHHhhhhcccccccCcccccceee
Confidence 79999999999999877666544311111000 000000 0111222222211 225689999999999999999999
Q ss_pred eeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCcee-----------------eee-echHH
Q 007982 77 SLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLE-----------------AVI-SCDEE 138 (582)
Q Consensus 77 nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~-----------------~~i-~~~~~ 138 (582)
|++++|.++.+++|++|++++|++|||+|+|||||||+|++|++-..|....+. .++ ..+..
T Consensus 80 sls~s~~g~~l~kd~~~El~~g~rygLiG~nG~Gkst~L~~i~~~e~P~p~~~d~y~ls~e~~ps~~~av~~v~~~~~~e 159 (614)
T KOG0927|consen 80 SLSLSFHGVELIKDVTLELNRGRRYGLIGPNGSGKSTFLRAIAGREVPIPEHIDFYLLSREIEPSEKQAVQAVVMETDHE 159 (614)
T ss_pred eeeeccCCceeeeeeeEEecCCceEEEEcCCCCcHhHHHHHHhcCCCCCCcccchhhhcccCCCchHHHHHHHhhhhHHH
Confidence 999999999999999999999999999999999999999999875554222110 001 11111
Q ss_pred HHHHHHHHHHhccc-cCCCcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 139 RLKLEKEAEILGAQ-EDGGGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 139 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
...+....+.+... +........+++.++..++.+.++.++..+|.++|+...++++.+.+||||||+|++|||+|+.+
T Consensus 160 ~~rle~~~E~l~~~~d~~~~~~l~~~~~r~~~~d~~~~~~k~~~il~glgf~~~m~~k~~~~~SgGwrmR~aLAr~Lf~k 239 (614)
T KOG0927|consen 160 RKRLEYLAEDLAQACDDKEKDELDELYERLDEMDNDTFEAKAAKILHGLGFLSEMQDKKVKDLSGGWRMRAALARALFQK 239 (614)
T ss_pred HHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhCchhHHHHHHHHHHhcCCCHhHHHHHhhccCchHHHHHHHHHHHhcC
Confidence 22233333333222 22234456678888888999999999999999999999999999999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhcCc-EEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHHHHHHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKFDR-ILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSELEENQM 296 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~~~-tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~~~ 296 (582)
|++|||||||||||++++.||.++|.++.. ++|++||+++|++.+|++|+.|+++++++|+|||++|..++.+..++|+
T Consensus 240 P~LLLLDEPtnhLDleA~~wLee~L~k~d~~~lVi~sh~QDfln~vCT~Ii~l~~kkl~~y~Gnydqy~~tr~E~~~~q~ 319 (614)
T KOG0927|consen 240 PDLLLLDEPTNHLDLEAIVWLEEYLAKYDRIILVIVSHSQDFLNGVCTNIIHLDNKKLIYYEGNYDQYVKTRSELEENQM 319 (614)
T ss_pred CCEEEecCCccCCCHHHHHHHHHHHHhccCceEEEEecchhhhhhHhhhhheecccceeeecCCHHHHhhHHHHHhHHHH
Confidence 999999999999999999999999999988 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEEEEEEe
Q 007982 297 KQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVEVTFGY 376 (582)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y 376 (582)
++|.|+|+++.+++++++++|+++++..++++++++.+++|.+.++++.+..++++.|+|+.++..|+|++.+.|++|.|
T Consensus 320 K~~~kqqk~i~~~K~~ia~~g~g~a~~~rka~s~~K~~~km~~~gL~ek~~~~k~l~~~f~~vg~~p~pvi~~~nv~F~y 399 (614)
T KOG0927|consen 320 KAYEKQQKQIAHMKDLIARFGHGSAKLGRKAQSKEKTLDKMEADGLTEKVVGEKVLSFRFPEVGKIPPPVIMVQNVSFGY 399 (614)
T ss_pred HHHHHHHhHHHHhhHHHHhhcccchhhhHHHhhhhhhHHHHhhccccccccCCceEEEEcccccCCCCCeEEEeccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCcccHHHHHHhc
Q 007982 377 TPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMDMSALQYMIKE 456 (582)
Q Consensus 377 ~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 456 (582)
+++..++++++|.|+.++++|+|||||||||||||+++|.+.|+.|.|+.+.+..++++.|+....++++.++.++++..
T Consensus 400 ~~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~~~~~y~Qh~~e~ldl~~s~le~~~~~ 479 (614)
T KOG0927|consen 400 SDNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHNKLPRYNQHLAEQLDLDKSSLEFMMPK 479 (614)
T ss_pred CCcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccccchhhhhhhHhhcCcchhHHHHHHHh
Confidence 87668999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCceE
Q 007982 457 YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGL 535 (582)
Q Consensus 457 ~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tv 535 (582)
++. .+.+.++.+|++|||+++.+..|+++||+|||.||+|||+++..|+||||||||||||+++++.+.++|++|.++|
T Consensus 480 ~~~~~~~e~~r~ilgrfgLtgd~q~~p~~~LS~Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~~Ggv 559 (614)
T KOG0927|consen 480 FPDEKELEEMRSILGRFGLTGDAQVVPMSQLSDGQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEFPGGV 559 (614)
T ss_pred ccccchHHHHHHHHHHhCCCccccccchhhcccccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhccCCce
Confidence 874 6778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHHHHHcC
Q 007982 536 VLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHLKAKAG 579 (582)
Q Consensus 536 i~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~ 579 (582)
|+||||+.++.+++++||++++|.++.|+|++..|++++++++.
T Consensus 560 v~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~yk~~l~~~~~ 603 (614)
T KOG0927|consen 560 VLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEIYKEHLKKKRA 603 (614)
T ss_pred eeeechhhHHHHHHHHhHhhccCceeecCccHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999987653
No 2
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.9e-96 Score=797.40 Aligned_cols=499 Identities=41% Similarity=0.658 Sum_probs=422.5
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee----eechHHHH------H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV----ISCDEERL------K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~----i~~~~~~~------~ 141 (582)
+|+++|++++|+++.+|+++||+|.+|++|||||+||||||||||+|+|...++.|.+... +.+-.+.. .
T Consensus 3 ~i~~~~ls~~~g~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~~~t 82 (530)
T COG0488 3 MITLENLSLAYGDRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDPEKT 82 (530)
T ss_pred eEEEeeeEEeeCCceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCCCcc
Confidence 7999999999999999999999999999999999999999999999999887776643211 11110000 0
Q ss_pred --------------HHHHHHHhcccc-CCCcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHH
Q 007982 142 --------------LEKEAEILGAQE-DGGGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRM 206 (582)
Q Consensus 142 --------------~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrq 206 (582)
.....+.+.... ......+..+...+..++.+..+.++..+|..+|++.. ++++++||||||+
T Consensus 83 v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~~~~~LSGG~r~ 160 (530)
T COG0488 83 VLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DRPVSSLSGGWRR 160 (530)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cCchhhcCHHHHH
Confidence 000001110000 00111122233334445567888999999999999864 7899999999999
Q ss_pred HHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhcCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 207 RIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 207 Rv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
||+||+||+.+|++|||||||||||.+++.||.++|+++..|+|+||||++|++.+|++|+.++.|++..|.|||+.|.+
T Consensus 161 Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny~~~~~ 240 (530)
T COG0488 161 RVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRGKLTPYKGNYSSYLE 240 (530)
T ss_pred HHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCCceeEecCCHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcC-CCCcccccCceeEEEeccCC-CCCC
Q 007982 287 TRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERG-GLTEKVVKDKVLVFRFVDVG-KLPP 364 (582)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~ 364 (582)
.+.+....+.+.+..++++++++.+++.++.. .+..+++++++.+.+++|... ....+....++..+.|+... ..+.
T Consensus 241 ~r~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~-~~~~~k~a~sr~k~l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~ 319 (530)
T COG0488 241 QKAERLRQEAAAYEKQQKELAKEQEWIRRGKA-AASKAKKAKSRIKRLEKLEARLAEERPVEEGKPLAFRFPPPGKRLGK 319 (530)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHhhhhhcccccccccceeeccCCcccCCC
Confidence 99888888888888889999999999998875 334457899999999999853 22222333444556776665 3678
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcC
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLD 444 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~ 444 (582)
++++++|+++.|++++++++++||.|.+|+++||+||||+|||||||+|+|...|.+|+|.+....+++|++|+.... .
T Consensus 320 ~vl~~~~~~~~y~~~~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~v~igyf~Q~~~~l-~ 398 (530)
T COG0488 320 LVLEFENVSKGYDGGRLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGETVKIGYFDQHRDEL-D 398 (530)
T ss_pred eeEEEeccccccCCCceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCCceEEEEEEehhhhc-C
Confidence 899999999999765789999999999999999999999999999999999999999999998889999999997543 3
Q ss_pred CcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHH
Q 007982 445 MDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSL 524 (582)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l 524 (582)
.+.++.+++...++......++.+|++|++++....+|+..||||||.||+||++++.+|+||||||||||||+++++.|
T Consensus 399 ~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~~~~~v~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aL 478 (530)
T COG0488 399 PDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGEDQEKPVGVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEAL 478 (530)
T ss_pred ccCcHHHHHHhhCccccHHHHHHHHHHcCCChHHHhCchhhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHH
Confidence 67799999987766545778999999999999888899999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHHH
Q 007982 525 AEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHLK 575 (582)
Q Consensus 525 ~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~ 575 (582)
.++|.+|.+|||+||||.+|+.++|++||++++ ++..|.|++++|.+...
T Consensus 479 e~aL~~f~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~~~ 528 (530)
T COG0488 479 EEALLDFEGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQKK 528 (530)
T ss_pred HHHHHhCCCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHhhc
Confidence 999999999999999999999999999999999 88888999999998653
No 3
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-90 Score=774.88 Aligned_cols=497 Identities=36% Similarity=0.620 Sum_probs=394.6
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceee--e--eechHH-HHHH-HHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEA--V--ISCDEE-RLKL-EKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~--~--i~~~~~-~~~~-~~~ 145 (582)
+|+++||+++|+++.+|+|+||+|++|+++|||||||||||||||+|+|+.+|+.|.+.. . +.+..+ .... ...
T Consensus 1 ~i~i~nls~~~g~~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~~i~~~~q~~~~~~~~~ 80 (638)
T PRK10636 1 MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNWQLAWVNQETPALPQPA 80 (638)
T ss_pred CEEEEEEEEEeCCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCCCCH
Confidence 488999999999999999999999999999999999999999999999998887665321 0 110000 0000 000
Q ss_pred HHHhcccc---------------CCCcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHH
Q 007982 146 AEILGAQE---------------DGGGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 146 ~~~~~~~~---------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~L 210 (582)
...+.... ......+..+...+...+.+..+.++.++|+.+||.....++++.+|||||||||+|
T Consensus 81 ~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSgGerqRv~L 160 (638)
T PRK10636 81 LEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL 160 (638)
T ss_pred HHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCchhhcCHHHHHHHHH
Confidence 00000000 000000000111111122334567889999999996445688999999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhcCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHH
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSE 290 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~ 290 (582)
||||+.+|+||||||||||||+.++.||.++|++++.|||+||||++++..+||+|++|++|++..|.|+|+.|...+..
T Consensus 161 A~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~~~~~~~~~ 240 (638)
T PRK10636 161 AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSLFEYTGNYSSFEVQRAT 240 (638)
T ss_pred HHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeCCEEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999899999999987666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEE
Q 007982 291 LEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFV 370 (582)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 370 (582)
....+.+.|..++.+++++..++.++.. .+...++++++.+.++++.... +....+...|.|+.+...+.++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~i~r~~~-~a~~~~~a~~r~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~ 316 (638)
T PRK10636 241 RLAQQQAMYESQQERVAHLQSYIDRFRA-KATKAKQAQSRIKMLERMELIA---PAHVDNPFHFSFRAPESLPNPLLKME 316 (638)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHhhccc---ccccCCceeEecCCCccCCCceEEEE
Confidence 5666777888888888888888887643 2334567778887777765311 11112345566655544567899999
Q ss_pred EEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCcccHH
Q 007982 371 EVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMDMSAL 450 (582)
Q Consensus 371 ~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~~~~~ 450 (582)
|+++.|++ +.+|+|+||+|.+|+++||+|||||||||||++|+|+++|++|+|.+.....++|++|+....+....++.
T Consensus 317 ~l~~~y~~-~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~igy~~Q~~~~~l~~~~~~~ 395 (638)
T PRK10636 317 KVSAGYGD-RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEFLRADESPL 395 (638)
T ss_pred eeEEEeCC-eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCCEEEEEecCcchhhCCccchHH
Confidence 99999964 67999999999999999999999999999999999999999999998666689999997433344455666
Q ss_pred HHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHh
Q 007982 451 QYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNE 530 (582)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~ 530 (582)
+++....+......++.+|+.|++......+++++|||||||||+||++|+.+|+||||||||||||+.++..|.++|.+
T Consensus 396 ~~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~ 475 (638)
T PRK10636 396 QHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALID 475 (638)
T ss_pred HHHHHhCchhhHHHHHHHHHHcCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHH
Confidence 65533222233567889999999975444567899999999999999999999999999999999999999999999999
Q ss_pred cCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 531 WDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 531 ~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
+++|||+||||++++..+||+|++|++|+++.+.|++++|.+.
T Consensus 476 ~~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 518 (638)
T PRK10636 476 FEGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQW 518 (638)
T ss_pred cCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHHH
Confidence 9889999999999999999999999999998889999999654
No 4
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3.1e-87 Score=755.62 Aligned_cols=502 Identities=45% Similarity=0.792 Sum_probs=386.3
Q ss_pred CccceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCC---CCCCCceeee---e-----ec--
Q 007982 69 LSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIE---ASDMSSLEAV---I-----SC-- 135 (582)
Q Consensus 69 ~~~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~---~~~~~~~~~~---i-----~~-- 135 (582)
.+.+|+++|++++|+++.+|+|+||+|++|+++||||||||||||||++|+|.. .|+.+.+... + ..
T Consensus 174 ~~~~I~i~nls~~y~~~~ll~~isl~i~~Ge~~gLvG~NGsGKSTLLr~l~g~~~~g~p~~g~I~~~~Q~~~g~~~t~~~ 253 (718)
T PLN03073 174 AIKDIHMENFSISVGGRDLIVDASVTLAFGRHYGLVGRNGTGKTTFLRYMAMHAIDGIPKNCQILHVEQEVVGDDTTALQ 253 (718)
T ss_pred CceeEEEceEEEEeCCCEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCCCCEEEEEeccCCCCCCCHHH
Confidence 456899999999999989999999999999999999999999999999999753 2222222100 0 00
Q ss_pred -----hHHHHHH-HHHHHHhcc----ccC--------------CCc---chHHHHHHHHHcCChhHHHHHHHHHHHhCCC
Q 007982 136 -----DEERLKL-EKEAEILGA----QED--------------GGG---EQLERVYERLEALDASTAEKRAAEILYGLGF 188 (582)
Q Consensus 136 -----~~~~~~~-~~~~~~~~~----~~~--------------~~~---~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl 188 (582)
+.....+ ......+.. +.. ... ..+..+++.+...+.+..+.++.++|..+||
T Consensus 254 ~v~~~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~r~~~~L~~lgl 333 (718)
T PLN03073 254 CVLNTDIERTQLLEEEAQLVAQQRELEFETETGKGKGANKDGVDKDAVSQRLEEIYKRLELIDAYTAEARAASILAGLSF 333 (718)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHCCC
Confidence 0000000 000110100 000 000 1122334445555666788899999999999
Q ss_pred ChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhcCcEEEEEecCHHHHHhhcCeEEE
Q 007982 189 NKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIH 268 (582)
Q Consensus 189 ~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tviivsHd~~~~~~~~d~i~~ 268 (582)
.....++++.+|||||||||+|||||+.+|++|||||||+|||+.++.||.++|++++.|||+||||++++..+||+|++
T Consensus 334 ~~~~~~~~~~~LSgG~k~rv~LA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~tviivsHd~~~l~~~~d~i~~ 413 (718)
T PLN03073 334 TPEMQVKATKTFSGGWRMRIALARALFIEPDLLLLDEPTNHLDLHAVLWLETYLLKWPKTFIVVSHAREFLNTVVTDILH 413 (718)
T ss_pred ChHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEE
Confidence 75667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCeEEEEcCChhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCccccc
Q 007982 269 MQNKQLKFYTGNFDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVK 348 (582)
Q Consensus 269 l~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (582)
|++|++..|.|+|+.|...+.+....+.+.|..++.+.++++.++.++... ++...+++++.+.++++... .....
T Consensus 414 l~~g~i~~~~g~~~~~~~~~~~~~~~~~~~~e~~~k~~~~l~~~i~~~~~~-a~~~~~~~s~~k~l~~~~~~---~~~~~ 489 (718)
T PLN03073 414 LHGQKLVTYKGDYDTFERTREEQLKNQQKAFESNERSRSHMQAFIDKFRYN-AKRASLVQSRIKALDRLGHV---DAVVN 489 (718)
T ss_pred EECCEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhHHHhhcchHHHHHhhh---hcccc
Confidence 999999989999999987766666667777777788888888777765431 12223344444444443211 01111
Q ss_pred CceeEEEeccCC-CCCCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEc
Q 007982 349 DKVLVFRFVDVG-KLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRH 427 (582)
Q Consensus 349 ~~~~~~~~~~~~-~~~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~ 427 (582)
.....+.++... ..+.++|+++|+++.|++++.+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.
T Consensus 490 ~~~~~~~~~~~~~~~~~~~L~~~~ls~~y~~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~ 569 (718)
T PLN03073 490 DPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRS 569 (718)
T ss_pred CCCceeecCCCccCCCCceEEEEeeEEEeCCCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEEC
Confidence 112233443322 1235789999999999654579999999999999999999999999999999999999999999987
Q ss_pred CceeEEEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 428 NHLRIAQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 428 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
+...++|++|+....+....+....+...++....+.++++|+.||+.+....+++.+|||||||||+|||+++.+|++|
T Consensus 570 ~~~~igyv~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~~~~~~~LSgGqkqRvaLAraL~~~p~lL 649 (718)
T PLN03073 570 AKVRMAVFSQHHVDGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIL 649 (718)
T ss_pred CceeEEEEeccccccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHhcCCccccCHHHHHHHHHHHHHhcCCCEE
Confidence 77789999997533222222222222222333345678899999999754445678999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHH
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHL 574 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~ 574 (582)
||||||+|||+.++..+.+.+.++++|||+||||++++..+||++|+|++|+++.+.|++++|++.+
T Consensus 650 LLDEPT~~LD~~s~~~l~~~L~~~~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~~~~ 716 (718)
T PLN03073 650 LLDEPSNHLDLDAVEALIQGLVLFQGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYKKTL 716 (718)
T ss_pred EEcCCCCCCCHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHHHHh
Confidence 9999999999999999999999888899999999999999999999999999987899999998765
No 5
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.2e-89 Score=709.06 Aligned_cols=496 Identities=43% Similarity=0.712 Sum_probs=417.5
Q ss_pred ccceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHh
Q 007982 70 SRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEIL 149 (582)
Q Consensus 70 ~~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 149 (582)
+.+|.+.+++..||++.+|++.++++..|.+|||+|+||+|||||||+|+.-.......-+.....+... .....
T Consensus 78 ~~Di~~~~fdLa~G~k~LL~~a~L~L~~GrRYGLvGrNG~GKsTLLRaia~~~v~~f~veqE~~g~~t~~-----~~~~l 152 (582)
T KOG0062|consen 78 SKDIHIDNFDLAYGGKILLNKANLTLSRGRRYGLVGRNGIGKSTLLRAIANGQVSGFHVEQEVRGDDTEA-----LQSVL 152 (582)
T ss_pred ccceeeeeeeeeecchhhhcCCceeeecccccceeCCCCCcHHHHHHHHHhcCcCccCchhheeccchHH-----Hhhhh
Confidence 5689999999999999999999999999999999999999999999999841100000000000101000 00000
Q ss_pred ccccCCCcchHHHHHHHHHcCChh-HHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCCCC
Q 007982 150 GAQEDGGGEQLERVYERLEALDAS-TAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTN 228 (582)
Q Consensus 150 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~ 228 (582)
........-+.+.- .+... ..++....+|..+||+++++.+++++||||||+|++|||||+.+|+|||||||||
T Consensus 153 ----~~D~~~~dfl~~e~-~l~~~~~l~ei~~~~L~glGFt~emq~~pt~slSGGWrMrlaLARAlf~~pDlLLLDEPTN 227 (582)
T KOG0062|consen 153 ----ESDTERLDFLAEEK-ELLAGLTLEEIYDKILAGLGFTPEMQLQPTKSLSGGWRMRLALARALFAKPDLLLLDEPTN 227 (582)
T ss_pred ----hccHHHHHHHHhhh-hhhccchHHHHHHHHHHhCCCCHHHHhccccccCcchhhHHHHHHHHhcCCCEEeecCCcc
Confidence 00000001111110 01111 2233344499999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 007982 229 HLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSELEENQMKQYKWEQEQIAS 308 (582)
Q Consensus 229 ~LD~~~~~~l~~~l~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (582)
+||..+..||.++|..|+.|+|+||||..|++.+|+.||++++-++-+|.|||++|.+++.+...++...|..++...++
T Consensus 228 hLDv~av~WLe~yL~t~~~T~liVSHDr~FLn~V~tdIIH~~~~kL~~YkGN~~~Fvk~k~E~~~n~qrefe~q~~~R~h 307 (582)
T KOG0062|consen 228 HLDVVAVAWLENYLQTWKITSLIVSHDRNFLNTVCTDIIHLENLKLDYYKGNYSQFVKTKPEAKKNQQREFEVQMKYRAH 307 (582)
T ss_pred cchhHHHHHHHHHHhhCCceEEEEeccHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHhhHHhhhhhhhhcchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888999999988889999
Q ss_pred HHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEecc-CCCCCCCeEEEEEEEEEecCCc-eeeEee
Q 007982 309 MKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVD-VGKLPPPVLQFVEVTFGYTPDN-LIYKNL 386 (582)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~y~~~~-~~l~~v 386 (582)
++.++.+|.- .++.+...+|+.+.+.++.. -.++..+....|.||. .....+|++++.+|+|.|.++. +++.++
T Consensus 308 ~q~fid~FrY-na~ra~svqSRIk~L~kl~~---lk~~~~~~~~~~~fP~~~e~~~~p~l~i~~V~f~y~p~~y~~~~~~ 383 (582)
T KOG0062|consen 308 LQVFIDKFRY-NAARASSVQSRIKMLGKLPA---LKSTLIEVLIGFLFPTEGEVLSPPNLRISYVAFEYTPSEYQWRKQL 383 (582)
T ss_pred HHHHHHHhcc-CcccchhHHHHHHHhccCCC---CCccceecccceecCCCCCcCCCCeeEEEeeeccCCCcchhhhhcc
Confidence 9999998863 23334477888887766533 2333344456788887 3466789999999999998766 688999
Q ss_pred eEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCcccHHHHHHhcCCCChHHHHH
Q 007982 387 DFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMR 466 (582)
Q Consensus 387 sl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (582)
++++...++++++|+||+||||++|++.|.+.|..|.+.+++..+++|+.|+-.+.++...+..+++...++...++.++
T Consensus 384 ~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~r~ri~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r 463 (582)
T KOG0062|consen 384 GLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHPRLRIKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIR 463 (582)
T ss_pred CCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecccceecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999998888888888899998888888889999
Q ss_pred HHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHH
Q 007982 467 AAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLIN 546 (582)
Q Consensus 467 ~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~ 546 (582)
+.++.|||++....+++.+||||||.||+||.+.+.+|++|+|||||||||.++..+|.++|+.|+++||+||||.+|+.
T Consensus 464 ~hl~~~Gl~g~la~~si~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F~GGVv~VSHd~~fi~ 543 (582)
T KOG0062|consen 464 RHLGSFGLSGELALQSIASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNFNGGVVLVSHDEEFIS 543 (582)
T ss_pred HHHHhcCCCchhhhccccccCCcchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhcCCcEEEEECcHHHHh
Confidence 99999999998888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCEEEEEeCCeEEEEcCCHHHHHHHHHHHcC
Q 007982 547 QVAHEIWVCENQAVTRWEGDIMDFKLHLKAKAG 579 (582)
Q Consensus 547 ~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~ 579 (582)
.+|+++|++++|+|+.++|.+.+|++.+..++.
T Consensus 544 ~~c~E~Wvve~g~vt~ieg~~~~yKkl~~~e~~ 576 (582)
T KOG0062|consen 544 SLCKELWVVEDGKVTPIEGGIDKYKKLLGAELR 576 (582)
T ss_pred hcCceeEEEcCCcEEeeeccHHHHHHHHHHHHh
Confidence 999999999999999999999999998877653
No 6
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.1e-86 Score=750.12 Aligned_cols=492 Identities=29% Similarity=0.480 Sum_probs=382.9
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee----eec-hHH----H-HH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV----ISC-DEE----R-LK 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~----i~~-~~~----~-~~ 141 (582)
+|+++||+++|+++.+|+|+||+|++|+++||+|||||||||||++|+|+.+|+.|.+... +.. ... . ..
T Consensus 3 ~l~i~~ls~~~~~~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~~~~~~~l~q~~~~~~~~~ 82 (635)
T PRK11147 3 LISIHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQDLIVARLQQDPPRNVEGT 82 (635)
T ss_pred EEEEeeEEEEeCCceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCCCCEEEEeccCCCCCCCCC
Confidence 6999999999999999999999999999999999999999999999999988876654210 000 000 0 00
Q ss_pred HHHH--------------HHHhccc-cCCCc-chHH---HHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCCh
Q 007982 142 LEKE--------------AEILGAQ-EDGGG-EQLE---RVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSG 202 (582)
Q Consensus 142 ~~~~--------------~~~~~~~-~~~~~-~~~~---~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSG 202 (582)
.... ...+... ..... ..+. .+...+...+....+.++.++|+.+||. .++++.+|||
T Consensus 83 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~---~~~~~~~LSg 159 (635)
T PRK11147 83 VYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQLGLD---PDAALSSLSG 159 (635)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCC---CCCchhhcCH
Confidence 0000 0000000 00000 0000 0111111122234567889999999996 2689999999
Q ss_pred hHHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhcCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChh
Q 007982 203 GWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFD 282 (582)
Q Consensus 203 GqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~ 282 (582)
||||||+|||||+.+|+||||||||||||+.++.||.++|++++.|||+||||++++..+||+|++|++|+++.|.|+|+
T Consensus 160 GekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~~tvlivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~ 239 (635)
T PRK11147 160 GWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQGSIIFISHDRSFIRNMATRIVDLDRGKLVSYPGNYD 239 (635)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEecCCHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999998999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCC
Q 007982 283 QYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKL 362 (582)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (582)
.|...+.+..+.+...+..++.+++.+..++.+ +. .+...++ +++.+.++++..... ++....+...+.|+.....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~a~~~~~-~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 315 (635)
T PRK11147 240 QYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQ-GI-KARRTRN-EGRVRALKALRRERS-ERREVMGTAKMQVEEASRS 315 (635)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hh-hhhhhhH-HHHHHHHHHhhhhhc-cccccCCceeEEeCCCCCC
Confidence 999876665555556666667777777777766 21 1222222 555555655542111 1111123345666554445
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhh
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEK 442 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~ 442 (582)
+.++|+++|+++.|++ +++|+|+||+|.+|+++||+|||||||||||++|+|+++|++|+|.+.....++|++|+. ..
T Consensus 316 ~~~~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~~~i~y~~q~~-~~ 393 (635)
T PRK11147 316 GKIVFEMENVNYQIDG-KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHCGTKLEVAYFDQHR-AE 393 (635)
T ss_pred CCceEEEeeeEEEECC-eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCCcEEEEEeCcc-cc
Confidence 6779999999999964 679999999999999999999999999999999999999999999885456799999975 23
Q ss_pred cCCcccHHHHHHhcCC----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCH
Q 007982 443 LDMDMSALQYMIKEYP----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDI 518 (582)
Q Consensus 443 ~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~ 518 (582)
+....|+.+++..... ......++++|+.|++......+++.+|||||||||+|||+|+.+|+||||||||||||+
T Consensus 394 l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~~~p~lLlLDEPt~~LD~ 473 (635)
T PRK11147 394 LDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKRAMTPVKALSGGERNRLLLARLFLKPSNLLILDEPTNDLDV 473 (635)
T ss_pred cCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCH
Confidence 5566788888754321 112446788999999975444567899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEe-CCeEEEEcCCHHHHHH
Q 007982 519 ETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCE-NQAVTRWEGDIMDFKL 572 (582)
Q Consensus 519 ~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~-~G~i~~~~g~~~~~~~ 572 (582)
.++..|.++|+++++|||+||||++++..+||+|++|+ +|+++.|.|++++|.+
T Consensus 474 ~~~~~l~~~l~~~~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 474 ETLELLEELLDSYQGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HHHHHHHHHHHhCCCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999998999999999999999999999998 8999999999999965
No 7
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-84 Score=718.35 Aligned_cols=498 Identities=30% Similarity=0.557 Sum_probs=367.7
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee----eechHHH------HH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV----ISCDEER------LK 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~----i~~~~~~------~~ 141 (582)
+|+++|++++|+++++|+|+||+|++|++++|+|||||||||||++|+|+.+|+.|.+... +.+..+. ..
T Consensus 1 ml~i~~ls~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~~~~~~t 80 (530)
T PRK15064 1 MLSTANITMQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQFAFEEFT 80 (530)
T ss_pred CEEEEEEEEEeCCcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCcCCCCc
Confidence 4889999999998899999999999999999999999999999999999988876643210 1110000 00
Q ss_pred HHHHHH--------------HhccccCCC---cchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhH
Q 007982 142 LEKEAE--------------ILGAQEDGG---GEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGW 204 (582)
Q Consensus 142 ~~~~~~--------------~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGq 204 (582)
...... .+....... .....+....+..+.....+.++.++|+.+|+.....++++.+|||||
T Consensus 81 v~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGq 160 (530)
T PRK15064 81 VLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLMSEVAPGW 160 (530)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCchhhcCHHH
Confidence 000000 000000000 000011111111122233456788999999997544456899999999
Q ss_pred HHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhcCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 205 RMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 205 rqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
||||+|||||+.+|+||||||||++||+.++.+|.++|++.+.|||+||||++++..+||+|++|++|+++.+.|++++|
T Consensus 161 ~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~ 240 (530)
T PRK15064 161 KLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLDYGELRVYPGNYDEY 240 (530)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEeCCEEEEecCCHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999997788999998
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCC
Q 007982 285 VQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPP 364 (582)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (582)
...+..........+...+.++..+..++.+... .+.....++++.+.++++...... ...... ..+.++.....+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~ 317 (530)
T PRK15064 241 MTAATQARERLLADNAKKKAQIAELQSFVSRFSA-NASKAKQATSRAKQIDKIKLEEVK-PSSRQN-PFIRFEQDKKLHR 317 (530)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cchhhHHHHHHHHHHhhccccccC-CccccC-ceeeCCCCCCCCC
Confidence 7654433333333444444455444444443211 111122233333333322111110 000000 1112222222245
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcC
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLD 444 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~ 444 (582)
++|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+...++|++|.+...+.
T Consensus 318 ~~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~~~q~~~~~~~ 396 (530)
T PRK15064 318 NALEVENLTKGFDN-GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSENANIGYYAQDHAYDFE 396 (530)
T ss_pred ceEEEEeeEEeeCC-ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCceEEEEEcccccccCC
Confidence 78999999999964 57999999999999999999999999999999999999999999998887789999998643344
Q ss_pred CcccHHHHHHhcC-CCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHH
Q 007982 445 MDMSALQYMIKEY-PGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDS 523 (582)
Q Consensus 445 ~~~~~~~~~~~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~ 523 (582)
...++.+++.... .....++++++|+.+|+.....++++.+|||||||||+|||+++.+|++|||||||+|||+.++..
T Consensus 397 ~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~ 476 (530)
T PRK15064 397 NDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIES 476 (530)
T ss_pred CCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHH
Confidence 4567777654321 122345688999999995333456779999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 524 LAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 524 l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
+.+.|+++++|||+||||++++..+||+|++|++|+++.+.|++.++.+.
T Consensus 477 l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 477 LNMALEKYEGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 99999999889999999999999999999999999998789999988764
No 8
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.1e-83 Score=710.88 Aligned_cols=495 Identities=27% Similarity=0.413 Sum_probs=368.1
Q ss_pred ceEEeeeEEEEC-CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee----eechHHH------H
Q 007982 72 DIRIESLSVTFH-GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV----ISCDEER------L 140 (582)
Q Consensus 72 ~i~v~nls~~y~-~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~----i~~~~~~------~ 140 (582)
+|+++||+++|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+... +.+-.+. .
T Consensus 6 ~l~i~~l~~~y~~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~~~ 85 (556)
T PRK11819 6 IYTMNRVSKVVPPKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLDPEK 85 (556)
T ss_pred EEEEeeEEEEeCCCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCCCC
Confidence 799999999998 7899999999999999999999999999999999999988876654210 1110000 0
Q ss_pred HHHHHHHH-hc-------------cccCCCcc-------hHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCC
Q 007982 141 KLEKEAEI-LG-------------AQEDGGGE-------QLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRD 199 (582)
Q Consensus 141 ~~~~~~~~-~~-------------~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~ 199 (582)
........ +. ........ ....+.+.+...+.+....++.++++.+|+. . .++++.+
T Consensus 86 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-~-~~~~~~~ 163 (556)
T PRK11819 86 TVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP-P-WDAKVTK 163 (556)
T ss_pred cHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC-c-ccCchhh
Confidence 00000000 00 00000000 0001111111222233456788999999995 3 5789999
Q ss_pred CChhHHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhcCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcC
Q 007982 200 FSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTG 279 (582)
Q Consensus 200 LSGGqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g 279 (582)
|||||||||+|||||+.+|++||||||||+||+.++.++.++|++++.|||+||||++++..+||+|++|++|+++.+.|
T Consensus 164 LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i~~l~~g~i~~~~g 243 (556)
T PRK11819 164 LSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGRGIPWEG 243 (556)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEeCCEEEEecC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999987899
Q ss_pred ChhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccC
Q 007982 280 NFDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDV 359 (582)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (582)
+|++|...+......+...+.+.+..+..+.+++.+.... + ....+++.+.++++...... ...+...+.++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 317 (556)
T PRK11819 244 NYSSWLEQKAKRLAQEEKQEAARQKALKRELEWVRQSPKA--R-QAKSKARLARYEELLSEEYQ---KRNETNEIFIPPG 317 (556)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh--h-HHHHHHHHHHHHHhhccccc---ccCCCceeecCCC
Confidence 9999987654433334444444444554444444331100 0 00112222223332211100 0111122233332
Q ss_pred CCCCCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhh
Q 007982 360 GKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHL 439 (582)
Q Consensus 360 ~~~~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~ 439 (582)
.....++|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+...++|++|..
T Consensus 318 ~~~~~~~l~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~q~~ 396 (556)
T PRK11819 318 PRLGDKVIEAENLSKSFGD-RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGETVKLAYVDQSR 396 (556)
T ss_pred CCCCCeEEEEEeEEEEECC-eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCceEEEEEeCch
Confidence 2224578999999999964 579999999999999999999999999999999999999999999986555799999975
Q ss_pred hhhcCCcccHHHHHHhcCC----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCC
Q 007982 440 AEKLDMDMSALQYMIKEYP----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNH 515 (582)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~ 515 (582)
. .+....++.+++..... ......++.+++.+|+.....++++.+|||||||||+|||+++.+|+||||||||+|
T Consensus 397 ~-~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~ 475 (556)
T PRK11819 397 D-ALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTND 475 (556)
T ss_pred h-hcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCC
Confidence 2 34456788887653211 112334668899999975333567799999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeC-CeEEEEcCCHHHHHHHHHH
Q 007982 516 LDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCEN-QAVTRWEGDIMDFKLHLKA 576 (582)
Q Consensus 516 LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~-G~i~~~~g~~~~~~~~~~~ 576 (582)
||+.++..+.+.|.++.+|||+||||++++..+||+|++|++ |++..|.|++++|.+...+
T Consensus 476 LD~~~~~~l~~~l~~~~~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~~~~ 537 (556)
T PRK11819 476 LDVETLRALEEALLEFPGCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEEDKKR 537 (556)
T ss_pred CCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHHHHH
Confidence 999999999999999988999999999999999999999985 8888899999999887554
No 9
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=9.9e-83 Score=708.36 Aligned_cols=496 Identities=26% Similarity=0.428 Sum_probs=364.5
Q ss_pred ceEEeeeEEEEC-CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceee----eeechHHH------H
Q 007982 72 DIRIESLSVTFH-GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEA----VISCDEER------L 140 (582)
Q Consensus 72 ~i~v~nls~~y~-~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~----~i~~~~~~------~ 140 (582)
+|+++||+++|+ ++++|+|+||+|++|++++|+|||||||||||++|+|+.+|+.|.+.. .+.+-.+. .
T Consensus 4 ~i~~~nls~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~~~ 83 (552)
T TIGR03719 4 IYTMNRVSKVVPPKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDPTK 83 (552)
T ss_pred EEEEeeEEEecCCCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCCCC
Confidence 799999999998 788999999999999999999999999999999999998887665321 01110000 0
Q ss_pred HHHHHHHH-hcc-------------c-cCCCcc------hHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCC
Q 007982 141 KLEKEAEI-LGA-------------Q-EDGGGE------QLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRD 199 (582)
Q Consensus 141 ~~~~~~~~-~~~-------------~-~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~ 199 (582)
........ +.. . ...... ....+.+.+..++.+..+.++.++++.+|+.. .++++.+
T Consensus 84 tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~ 161 (552)
T TIGR03719 84 TVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPP--WDADVTK 161 (552)
T ss_pred cHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCc--ccCchhh
Confidence 00000000 000 0 000000 00111222222232334567888999999953 4789999
Q ss_pred CChhHHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhcCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcC
Q 007982 200 FSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTG 279 (582)
Q Consensus 200 LSGGqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g 279 (582)
|||||||||+|||||+.+|++||||||||+||+.++.+|.++|++++.|||+||||++++..+||++++|++|+++.+.|
T Consensus 162 LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~g~i~~~~g 241 (552)
T TIGR03719 162 LSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDRGRGIPWEG 241 (552)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEECCEEEEecC
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999988899
Q ss_pred ChhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccC
Q 007982 280 NFDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDV 359 (582)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (582)
++++|........+.+...+...++++..+..++.+..... . ...+++.+..++...... ........+.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 315 (552)
T TIGR03719 242 NYSSWLEQKEKRLEQEEKEESARQKALKRELEWVRSSPKAR-Q--AKSKARLARYEELLSQEF---QKRNETAEIYIPPG 315 (552)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-H--HHHHHHHHHHHhhhhhcc---cccCCCceeecCCC
Confidence 99999875543333333334444444444333333211100 0 011111122222211100 00111112223322
Q ss_pred CCCCCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhh
Q 007982 360 GKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHL 439 (582)
Q Consensus 360 ~~~~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~ 439 (582)
.....++|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+...++|++|..
T Consensus 316 ~~~~~~~l~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~~~~i~~v~q~~ 394 (552)
T TIGR03719 316 PRLGDKVIEAENLSKGFGD-KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGETVKLAYVDQSR 394 (552)
T ss_pred CCCCCeEEEEeeEEEEECC-eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECCceEEEEEeCCc
Confidence 2224578999999999964 579999999999999999999999999999999999999999999886555799999974
Q ss_pred hhhcCCcccHHHHHHhcCC----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCC
Q 007982 440 AEKLDMDMSALQYMIKEYP----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNH 515 (582)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~ 515 (582)
. .+....++.+++..... ......++++++.+|+.....++++.+|||||||||+|||+|+.+|++|||||||+|
T Consensus 395 ~-~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~ 473 (552)
T TIGR03719 395 D-ALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTND 473 (552)
T ss_pred c-ccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Confidence 2 24456788887754221 112334678899999965433567799999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeC-CeEEEEcCCHHHHHHHHHHH
Q 007982 516 LDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCEN-QAVTRWEGDIMDFKLHLKAK 577 (582)
Q Consensus 516 LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~-G~i~~~~g~~~~~~~~~~~~ 577 (582)
||+.++..+.+.|+++++|||+||||++++.++||+|++|++ |++..|.|++++|++...+.
T Consensus 474 LD~~~~~~l~~~l~~~~~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~~~~~~ 536 (552)
T TIGR03719 474 LDVETLRALEEALLEFAGCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEEDKKRR 536 (552)
T ss_pred CCHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHHHHHHH
Confidence 999999999999999988999999999999999999999986 68888999999998765543
No 10
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7e-84 Score=650.60 Aligned_cols=499 Identities=44% Similarity=0.774 Sum_probs=406.8
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhc---CCCCCCCceeee--ee-----------
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGE---IEASDMSSLEAV--IS----------- 134 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~---~~~~~~~~~~~~--i~----------- 134 (582)
.+|+|+|++.+-.|+.+|.+.||.|-.|.+||||||||-||||||+.|+. -+||....+-.. +.
T Consensus 263 ~DIKiEnF~ISA~Gk~LFvnA~L~Iv~GRRYGLVGPNG~GKTTLLkHIa~RalaIPpnIDvLlCEQEvvad~t~Ai~tvl 342 (807)
T KOG0066|consen 263 MDIKIENFDISAQGKLLFVNASLTIVYGRRYGLVGPNGMGKTTLLKHIAARALAIPPNIDVLLCEQEVVADSTSAIDTVL 342 (807)
T ss_pred ccceeeeeeeecccceeeeccceEEEecceecccCCCCCchHHHHHHHHhhhccCCCCCceEeeeeeeeecCcHHHHHHH
Confidence 47999999999999999999999999999999999999999999999972 334433222110 11
Q ss_pred -chHHHHHHHHHHHHhccccC----CCcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHH
Q 007982 135 -CDEERLKLEKEAEILGAQED----GGGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIA 209 (582)
Q Consensus 135 -~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~ 209 (582)
.+..+..+......+..+.. .....+..+++.+..+....++.+++.+|.++||+..+.+++...+|||||+||+
T Consensus 343 ~aD~kRl~lLeee~~L~~q~e~Gd~taaErl~~v~~ELraiGA~sAEarARRILAGLGFskEMQ~rPt~kFSGGWRMRvS 422 (807)
T KOG0066|consen 343 KADKKRLALLEEEAKLMSQIEEGDTTAAERLKEVADELRAIGADSAEARARRILAGLGFSKEMQERPTTKFSGGWRMRVS 422 (807)
T ss_pred HhhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHhccccchhHHHHHHhhcCCChhHhcCCccccCCceeeehh
Confidence 11111111111112211111 1123445677778777778888999999999999999999999999999999999
Q ss_pred HHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhcCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHH
Q 007982 210 LARALFINPTILLLDEPTNHLDLEACVWLEETLKKFDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRS 289 (582)
Q Consensus 210 LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~ 289 (582)
|||||+.+|.+|.|||||||||..+..||-++|..|++|++|||||..|+..+|+.||+|++.++.+|.|||..|.....
T Consensus 423 LARALflEPTLLMLDEPTNHLDLNAVIWLdNYLQgWkKTLLIVSHDQgFLD~VCtdIIHLD~qkLhyYrGNY~~FKKmY~ 502 (807)
T KOG0066|consen 423 LARALFLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWKKTLLIVSHDQGFLDSVCTDIIHLDNQKLHYYRGNYTLFKKMYA 502 (807)
T ss_pred HHHHHhcCceeeeecCCccccccceeeehhhHHhhhhheeEEEecccchHHHHHHHHhhhhhhhhhhhcchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998876555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHH--HHHHHHHH-----------cCCCCccccc--CceeEE
Q 007982 290 ELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSK--EKTLAKME-----------RGGLTEKVVK--DKVLVF 354 (582)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----------~~~~~~~~~~--~~~~~~ 354 (582)
.......+.|..++...+.++.. |. ++ .+++.. +....+.. ..+..+-+.+ +-.+.|
T Consensus 503 Qk~~e~~K~yekQeK~LkelKa~----Gk-S~---KqAEkq~Ke~ltrKq~K~~~Knq~dded~gapELL~RpKEY~VkF 574 (807)
T KOG0066|consen 503 QKMQEHEKNYEKQEKQLKELKAE----GK-SA---KQAEKQVKEQLTRKQKKGGKKNQNDDEDAGAPELLQRPKEYSVKF 574 (807)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----Cc-ch---HHHHHHHHHHHHHHHHhccccccCccccccCHHHHhCchheEEEE
Confidence 44455566777777666655421 11 11 111111 11111111 0111111111 224678
Q ss_pred EeccCCCCCCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEE
Q 007982 355 RFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQ 434 (582)
Q Consensus 355 ~~~~~~~~~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~ 434 (582)
+||++.++.+|+|-+++|+|.|++.+++|..++|.|...+++|||||||.||||||++|.|-+.|..|..+.+..++||+
T Consensus 575 ~FPep~~L~PPvLGlH~VtFgy~gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKnhrL~iG~ 654 (807)
T KOG0066|consen 575 QFPEPTKLNPPVLGLHDVTFGYPGQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKNHRLRIGW 654 (807)
T ss_pred ecCCCCCCCCCeeecccccccCCCCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhccceeeeec
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999988899999
Q ss_pred echhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTN 514 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~ 514 (582)
+.|+....+....|+.+|+...|. ...+.++..|+.|||......-.+..|||||+.||+||-..+..|+|||||||||
T Consensus 655 FdQh~~E~L~~Eetp~EyLqr~FN-lpyq~ARK~LG~fGL~sHAHTikikdLSGGQKaRValaeLal~~PDvlILDEPTN 733 (807)
T KOG0066|consen 655 FDQHANEALNGEETPVEYLQRKFN-LPYQEARKQLGTFGLASHAHTIKIKDLSGGQKARVALAELALGGPDVLILDEPTN 733 (807)
T ss_pred hhhhhHHhhccccCHHHHHHHhcC-CChHHHHHHhhhhhhhhccceEeeeecCCcchHHHHHHHHhcCCCCEEEecCCCC
Confidence 999999999999999999877653 3567899999999998766666788999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHHHHHc
Q 007982 515 HLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHLKAKA 578 (582)
Q Consensus 515 ~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~ 578 (582)
+||++++++|.++|++|.++|||||||..++.+..=..||+++..|-+.+|++++|++.+-..+
T Consensus 734 NLDIESIDALaEAIney~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eIdGdFeDYkkEVLdaL 797 (807)
T KOG0066|consen 734 NLDIESIDALAEAINEYNGGVIMVSHDERLIVETDCNLWVVENQGIDEIDGDFEDYKKEVLDAL 797 (807)
T ss_pred CcchhhHHHHHHHHHhccCcEEEEecccceeeecCceEEEEccCChhhccccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999877668999999999889999999998765443
No 11
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.9e-81 Score=666.08 Aligned_cols=455 Identities=23% Similarity=0.327 Sum_probs=349.3
Q ss_pred ceEEeeeEEEECCe----eeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-HHH-HH
Q 007982 72 DIRIESLSVTFHGH----DLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-KLE-KE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~----~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-~~~-~~ 145 (582)
.|+|+||++.|... .+++||||+|.+||++||||+|||||||+.++|.|+.++......|.+.+++... .+. ..
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 79999999999532 6999999999999999999999999999999999999887544445555444322 110 00
Q ss_pred H-----HHhc--cccCCCc--------chHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhh-hccCCCCChhHHHHHH
Q 007982 146 A-----EILG--AQEDGGG--------EQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQ-AKKTRDFSGGWRMRIA 209 (582)
Q Consensus 146 ~-----~~~~--~~~~~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~-~~~~~~LSGGqrqRv~ 209 (582)
. ..++ +|.+... .++.+++.........+.++++.++|+.+||++... +++|++|||||||||.
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSGG~rQRv~ 164 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYPHQLSGGMRQRVM 164 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccCCcccCchHHHHHH
Confidence 1 1122 3332211 111222221222347788899999999999986544 3699999999999999
Q ss_pred HHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 210 LARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 210 LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||+||+.+|++||+||||++||+..+.+|+++|+++ +.++|+||||+..+.++||||+||++|+++. .|..++.+
T Consensus 165 iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE-~G~~~~i~ 243 (539)
T COG1123 165 IAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE-TGPTEEIL 243 (539)
T ss_pred HHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE-ecCHHHHH
Confidence 999999999999999999999999999999998764 7899999999999999999999999999974 57766654
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCC
Q 007982 286 QTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPP 365 (582)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (582)
.+ +.|.|.+.--.+ . +.....+....... ......|
T Consensus 244 ~~----------------------------p~hpYT~~Ll~a---------~------p~~~~~~~~~~~~~-~~~~~~~ 279 (539)
T COG1123 244 SN----------------------------PQHPYTRGLLAA---------V------PRLGDEKIIRLPRR-GPLRAEP 279 (539)
T ss_pred hc----------------------------cCCcccHHHHhh---------C------CCcccccccccccc-cccccCc
Confidence 31 222222110000 0 00000000000000 0001578
Q ss_pred eEEEEEEEEEecC------C----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------
Q 007982 366 VLQFVEVTFGYTP------D----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------ 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~------~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------ 429 (582)
+++++|+++.|.. . ..+++||||+|.+||++||||+||||||||.|+|+|+++|++|.|.+.+.
T Consensus 280 ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~~~g~~~~~~~ 359 (539)
T COG1123 280 LLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSIIFDGQDLDLTG 359 (539)
T ss_pred eeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEEeCccccccc
Confidence 9999999999973 1 35799999999999999999999999999999999999999999988663
Q ss_pred -------eeEEEechhhhhhcCCcccHHHHHHhcC----C---CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHH
Q 007982 430 -------LRIAQFHQHLAEKLDMDMSALQYMIKEY----P---GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 430 -------~~~~~~~q~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~ 495 (582)
..+.+++|++...+++..|+.+.+.... . ....+++.++|+.+||......+.+++|||||||||+
T Consensus 360 ~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~~l~ryP~elSGGQrQRva 439 (539)
T COG1123 360 GELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPEFLDRYPHELSGGQRQRVA 439 (539)
T ss_pred chhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHHHHhcCchhcCcchhHHHH
Confidence 2567789998888899999888765421 1 1123468889999999874334455899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNE----WDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|||||+.+|++||+||||+.||+-.+..+.++|.+ ++.|.|+||||+.++..+||||+||.+|+|++ .|+.++..
T Consensus 440 IARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~iVE-~G~~~~v~ 518 (539)
T COG1123 440 IARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGRIVE-EGPTEKVF 518 (539)
T ss_pred HHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCeEEE-eCCHHHHh
Confidence 99999999999999999999999999988888765 47899999999999999999999999999986 67777665
Q ss_pred H
Q 007982 572 L 572 (582)
Q Consensus 572 ~ 572 (582)
+
T Consensus 519 ~ 519 (539)
T COG1123 519 E 519 (539)
T ss_pred c
Confidence 4
No 12
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.4e-78 Score=671.55 Aligned_cols=438 Identities=24% Similarity=0.362 Sum_probs=335.6
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCCCceeeee-----------------
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIE--ASDMSSLEAVI----------------- 133 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~--~~~~~~~~~~i----------------- 133 (582)
|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+. +|+.|.+...-
T Consensus 1 l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~ 80 (520)
T TIGR03269 1 IEVKNLTKKFDGKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGE 80 (520)
T ss_pred CEEEEEEEEECCeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccccccccc
Confidence 57899999999889999999999999999999999999999999999986 46555432110
Q ss_pred -----e--c-----hH---HHHHHHHHHHHhc--ccc-C---CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCCh
Q 007982 134 -----S--C-----DE---ERLKLEKEAEILG--AQE-D---GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNK 190 (582)
Q Consensus 134 -----~--~-----~~---~~~~~~~~~~~~~--~~~-~---~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~ 190 (582)
. + +. ...........++ ++. . ......+++...+. .........++.++++.+|+.+
T Consensus 81 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 160 (520)
T TIGR03269 81 PCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQLSH 160 (520)
T ss_pred ccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh
Confidence 0 0 00 0000011112232 221 1 11233444433222 2334455678999999999974
Q ss_pred hhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeE
Q 007982 191 TMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNI 266 (582)
Q Consensus 191 ~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i 266 (582)
..++++.+|||||||||+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|
T Consensus 161 -~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~~~~d~i 239 (520)
T TIGR03269 161 -RITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDLSDKA 239 (520)
T ss_pred -hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEE
Confidence 568899999999999999999999999999999999999999999998887654 679999999999999999999
Q ss_pred EEEeCCeEEEEcCChhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCccc
Q 007982 267 IHMQNKQLKFYTGNFDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKV 346 (582)
Q Consensus 267 ~~l~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (582)
++|++|+++. .|+++++..... ... . .+. . .
T Consensus 240 ~~l~~G~i~~-~g~~~~~~~~~~------------------------~~~----~--------------~~~-----~-~ 270 (520)
T TIGR03269 240 IWLENGEIKE-EGTPDEVVAVFM------------------------EGV----S--------------EVE-----K-E 270 (520)
T ss_pred EEEeCCEEee-ecCHHHHHHHHH------------------------hhc----h--------------hhc-----c-c
Confidence 9999999974 677766532100 000 0 000 0 0
Q ss_pred ccCceeEEEeccCCCCCCCeEEEEEEEEEecC----CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCc
Q 007982 347 VKDKVLVFRFVDVGKLPPPVLQFVEVTFGYTP----DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDG 422 (582)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~----~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G 422 (582)
.....+.++|+++|+++.|++ ...+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|
T Consensus 271 -----------~~~~~~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G 339 (520)
T TIGR03269 271 -----------CEVEVGEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSG 339 (520)
T ss_pred -----------cccCCCCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCe
Confidence 000113568999999999952 24699999999999999999999999999999999999999999
Q ss_pred EEEEc-Cc-----------------eeEEEechhhhhhcCCcccHHHHHHhc----CCCC-hHHHHHHHHHhcCCCCc--
Q 007982 423 MVRRH-NH-----------------LRIAQFHQHLAEKLDMDMSALQYMIKE----YPGN-EEEKMRAAIGRFGLTGK-- 477 (582)
Q Consensus 423 ~i~~~-~~-----------------~~~~~~~q~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~l~~~gl~~~-- 477 (582)
+|.+. +. ..++|++|... +....++.+++... .+.. ..+++.++++.+|+...
T Consensus 340 ~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~--l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 417 (520)
T TIGR03269 340 EVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYD--LYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEKA 417 (520)
T ss_pred EEEEecCCccccccccchhhHHHHhhhEEEEccCcc--cCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCccc
Confidence 99874 21 23789998753 44456787776431 1111 23467889999999752
Q ss_pred --cccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhcCE
Q 007982 478 --AQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNE----WDGGLVLVSHDFRLINQVAHE 551 (582)
Q Consensus 478 --~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~~~~~~d~ 551 (582)
..++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.+.|++ .+.|||+||||++++.++||+
T Consensus 418 ~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~ 497 (520)
T TIGR03269 418 EEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDR 497 (520)
T ss_pred hhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCE
Confidence 23467799999999999999999999999999999999999999999999864 367999999999999999999
Q ss_pred EEEEeCCeEEEEcCCHHHHHHHH
Q 007982 552 IWVCENQAVTRWEGDIMDFKLHL 574 (582)
Q Consensus 552 i~~l~~G~i~~~~g~~~~~~~~~ 574 (582)
+++|++|+++ +.|+++++.+.+
T Consensus 498 i~~l~~G~i~-~~g~~~~~~~~~ 519 (520)
T TIGR03269 498 AALMRDGKIV-KIGDPEEIVEEL 519 (520)
T ss_pred EEEEECCEEE-EECCHHHHHhhc
Confidence 9999999996 578888776543
No 13
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-78 Score=679.57 Aligned_cols=473 Identities=19% Similarity=0.242 Sum_probs=341.1
Q ss_pred ceEEeeeEEEEC----CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceee-eeech----------
Q 007982 72 DIRIESLSVTFH----GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEA-VISCD---------- 136 (582)
Q Consensus 72 ~i~v~nls~~y~----~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~-~i~~~---------- 136 (582)
+|+++||+++|+ +..+|+|+||+|++|+++|||||||||||||+++|+|+.+++.|.+.. ...+.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 799999999996 257999999999999999999999999999999999999887664321 11110
Q ss_pred H-HHHHHHHHH-HHhc--cccC-----CCcchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCCh--hhhhccCCCCCh
Q 007982 137 E-ERLKLEKEA-EILG--AQED-----GGGEQLERVYERLE---ALDASTAEKRAAEILYGLGFNK--TMQAKKTRDFSG 202 (582)
Q Consensus 137 ~-~~~~~~~~~-~~~~--~~~~-----~~~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~--~~~~~~~~~LSG 202 (582)
. ......... ..++ +|.+ +.....+++...+. .++....+.++.++|+.+||.. ...++++.+|||
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~~LSg 171 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQTILSRYPHQLSG 171 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChhhHHhCCCccCCH
Confidence 0 000011111 1122 2322 11234444443322 2345556678999999999963 346889999999
Q ss_pred hHHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEc
Q 007982 203 GWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYT 278 (582)
Q Consensus 203 GqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~ 278 (582)
||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||||++|++|+++ ..
T Consensus 172 Gq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~-~~ 250 (623)
T PRK10261 172 GMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAV-ET 250 (623)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeec-cc
Confidence 9999999999999999999999999999999999999888754 679999999999999999999999999997 46
Q ss_pred CChhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEecc
Q 007982 279 GNFDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVD 358 (582)
Q Consensus 279 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (582)
|+++++...... .|. +.++......... .........+... ......... ..+..
T Consensus 251 g~~~~~~~~~~~-------~~~---------~~l~~~~~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~--~~~~~ 305 (623)
T PRK10261 251 GSVEQIFHAPQH-------PYT---------RALLAAVPQLGAM---KGLDYPRRFPLIS----LEHPAKQEP--PIEQD 305 (623)
T ss_pred CCHHHhhcCCCC-------hhh---------hhhhhccCccccc---ccccCCccccccc----cccccccCc--ccccc
Confidence 777766421100 000 0000000000000 0000000000000 000000000 00000
Q ss_pred CCCCCCCeEEEEEEEEEecC----------CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcC
Q 007982 359 VGKLPPPVLQFVEVTFGYTP----------DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHN 428 (582)
Q Consensus 359 ~~~~~~~~l~~~~l~~~y~~----------~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~ 428 (582)
......++|+++|+++.|+. ...+|+|+||+|.+||+++|+|+||||||||+++|+|+++|++|+|.+.+
T Consensus 306 ~~~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g 385 (623)
T PRK10261 306 TVVDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNG 385 (623)
T ss_pred cccCCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECC
Confidence 00113578999999999952 14689999999999999999999999999999999999999999998755
Q ss_pred c--------------eeEEEechhhhhhcCCcccHHHHHHhc---CC---C-ChHHHHHHHHHhcCCCCccccCCCCCCC
Q 007982 429 H--------------LRIAQFHQHLAEKLDMDMSALQYMIKE---YP---G-NEEEKMRAAIGRFGLTGKAQVMPMKNLS 487 (582)
Q Consensus 429 ~--------------~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~---~-~~~~~~~~~l~~~gl~~~~~~~~~~~LS 487 (582)
. ..++|++|+....+....++.+++... .. . ...+++.++|+.+||.....++++.+||
T Consensus 386 ~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~~LS 465 (623)
T PRK10261 386 QRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRYPHEFS 465 (623)
T ss_pred EECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCCcccCC
Confidence 2 248999998643455667777765431 11 1 1235678899999996333345678999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhcCEEEEEeCCeEEEE
Q 007982 488 DGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNE----WDGGLVLVSHDFRLINQVAHEIWVCENQAVTRW 563 (582)
Q Consensus 488 gGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~ 563 (582)
|||||||+|||||+.+|+||||||||++||+.++..+.++|++ .+.|||+||||++++.++||||++|++|+++ .
T Consensus 466 gGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv-~ 544 (623)
T PRK10261 466 GGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIV-E 544 (623)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-E
Confidence 9999999999999999999999999999999999999999865 3679999999999999999999999999997 4
Q ss_pred cCCHHHHH
Q 007982 564 EGDIMDFK 571 (582)
Q Consensus 564 ~g~~~~~~ 571 (582)
.|+.+++.
T Consensus 545 ~g~~~~i~ 552 (623)
T PRK10261 545 IGPRRAVF 552 (623)
T ss_pred ecCHHHHh
Confidence 78888764
No 14
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.7e-78 Score=670.19 Aligned_cols=447 Identities=23% Similarity=0.325 Sum_probs=333.5
Q ss_pred ceEEeeeEEEECC----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCC-CceeeeeechHHHH------
Q 007982 72 DIRIESLSVTFHG----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDM-SSLEAVISCDEERL------ 140 (582)
Q Consensus 72 ~i~v~nls~~y~~----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~-~~~~~~i~~~~~~~------ 140 (582)
+|+++|++++|++ +.+|+++||+|.+||+++|+||||||||||+++|+|+.++.. +...|.+.+++...
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 7999999999963 579999999999999999999999999999999999987520 00122232222111
Q ss_pred HHHHHH-HHhc--cccCC--C---cchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCChh--hhhccCCCCChhHHHH
Q 007982 141 KLEKEA-EILG--AQEDG--G---GEQLERVYERLE---ALDASTAEKRAAEILYGLGFNKT--MQAKKTRDFSGGWRMR 207 (582)
Q Consensus 141 ~~~~~~-~~~~--~~~~~--~---~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~~--~~~~~~~~LSGGqrqR 207 (582)
...... ..++ +|... . ....+.+...+. ..+......++.++++.+|+.+. ..++++.+||||||||
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe~qr 164 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQR 164 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHHHHH
Confidence 001111 1222 22211 0 111122222111 23444556788999999999642 3578999999999999
Q ss_pred HHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhH
Q 007982 208 IALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQ 283 (582)
Q Consensus 208 v~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 283 (582)
|+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++. .|..++
T Consensus 165 v~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~-~g~~~~ 243 (529)
T PRK15134 165 VMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE-QNRAAT 243 (529)
T ss_pred HHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE-eCCHHH
Confidence 99999999999999999999999999999999999763 6799999999999999999999999999975 455544
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCC
Q 007982 284 YVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLP 363 (582)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (582)
+...... .+ .+.+. .. .... .. .. ....+
T Consensus 244 ~~~~~~~-------~~---------~~~~~---------------------~~----~~~~-----~~--~~---~~~~~ 272 (529)
T PRK15134 244 LFSAPTH-------PY---------TQKLL---------------------NS----EPSG-----DP--VP---LPEPA 272 (529)
T ss_pred HhhCCCC-------HH---------HHHHH---------------------Hh----Cccc-----cc--cc---cCCCC
Confidence 4321000 00 00000 00 0000 00 00 01123
Q ss_pred CCeEEEEEEEEEecC----------CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----
Q 007982 364 PPVLQFVEVTFGYTP----------DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~----------~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---- 429 (582)
.++|+++|+++.|+. ++.+|+++||+|.+|+++||+||||||||||+++|+|++ |++|+|.+.+.
T Consensus 273 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~~~G~i~~~g~~i~~ 351 (529)
T PRK15134 273 SPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI-NSQGEIWFDGQPLHN 351 (529)
T ss_pred CCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-CCCcEEEECCEEccc
Confidence 568999999999952 357999999999999999999999999999999999998 58999987651
Q ss_pred ----------eeEEEechhhhhhcCCcccHHHHHHhc---C----CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHH
Q 007982 430 ----------LRIAQFHQHLAEKLDMDMSALQYMIKE---Y----PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQR 491 (582)
Q Consensus 430 ----------~~~~~~~q~~~~~~~~~~~~~~~~~~~---~----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqk 491 (582)
..++|++|.....+....++.+++... + +.. ..+.+.++++.+|+.....++++.+||||||
T Consensus 352 ~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~ 431 (529)
T PRK15134 352 LNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETRHRYPAEFSGGQR 431 (529)
T ss_pred cchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHHhcCCccCCHHHH
Confidence 247899998633344556777766431 1 111 2356788999999974333567799999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCH
Q 007982 492 SRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDI 567 (582)
Q Consensus 492 qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 567 (582)
|||+|||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ ..|++
T Consensus 432 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~-~~~~~ 510 (529)
T PRK15134 432 QRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQVIVLRQGEVV-EQGDC 510 (529)
T ss_pred HHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeEEEEECCEEE-EEcCH
Confidence 9999999999999999999999999999999999998753 579999999999999999999999999996 57888
Q ss_pred HHHHH
Q 007982 568 MDFKL 572 (582)
Q Consensus 568 ~~~~~ 572 (582)
+++..
T Consensus 511 ~~~~~ 515 (529)
T PRK15134 511 ERVFA 515 (529)
T ss_pred HHHhc
Confidence 87753
No 15
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-78 Score=666.30 Aligned_cols=438 Identities=18% Similarity=0.258 Sum_probs=331.0
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC--CCCceeeeeechHHHH---HHHHH-
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS--DMSSLEAVISCDEERL---KLEKE- 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~--~~~~~~~~i~~~~~~~---~~~~~- 145 (582)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+|+|+|+.++ +.|.+ .+++... .....
T Consensus 5 ~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i----~~~g~~~~~~~~~~~~ 80 (506)
T PRK13549 5 LLEMKNITKTFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEI----IFEGEELQASNIRDTE 80 (506)
T ss_pred eEEEeeeEEEeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEE----EECCEECCCCCHHHHH
Confidence 79999999999988999999999999999999999999999999999999875 44432 2222111 00000
Q ss_pred HHHhc--cccC---CCcchHHHHHHHHH-----cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHh
Q 007982 146 AEILG--AQED---GGGEQLERVYERLE-----ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALF 215 (582)
Q Consensus 146 ~~~~~--~~~~---~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~ 215 (582)
...++ +|.. ......+++..... ..+......++.++++.+|+.. ..++++.+|||||||||+|||||+
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGqkqrv~la~al~ 159 (506)
T PRK13549 81 RAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDI-NPATPVGNLGLGQQQLVEIAKALN 159 (506)
T ss_pred HCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCC-CcccchhhCCHHHHHHHHHHHHHh
Confidence 11122 2221 11122333322111 0122344567899999999964 568899999999999999999999
Q ss_pred cCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHHH
Q 007982 216 INPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSELE 292 (582)
Q Consensus 216 ~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~ 292 (582)
.+|++|||||||++||+.++.++.++|.++ +.|||+||||++++..+||++++|++|+++. .|+.+++... .
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~~~--~-- 234 (506)
T PRK13549 160 KQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIG-TRPAAGMTED--D-- 234 (506)
T ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEee-ecccccCCHH--H--
Confidence 999999999999999999999999998765 5799999999999999999999999999874 4554433210 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEE
Q 007982 293 ENQMKQYKWEQEQIASMKEYIARF-GHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVE 371 (582)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 371 (582)
.+..+ +. ...... +. .. ...+.++|+++|
T Consensus 235 -------------------~~~~~~~~----------------------~~~~~~-~~-------~~-~~~~~~~l~~~~ 264 (506)
T PRK13549 235 -------------------IITMMVGR----------------------ELTALY-PR-------EP-HTIGEVILEVRN 264 (506)
T ss_pred -------------------HHHHhhCc----------------------Cccccc-cc-------cc-cCCCCceEEEec
Confidence 00000 00 000000 00 00 012356899999
Q ss_pred EEEEec--CCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-CCCcEEEEcCc------------eeEEEec
Q 007982 372 VTFGYT--PDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-PLDGMVRRHNH------------LRIAQFH 436 (582)
Q Consensus 372 l~~~y~--~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-p~~G~i~~~~~------------~~~~~~~ 436 (582)
+++.|+ ++..+|+|+||+|++|++++|+||||||||||+|+|+|+++ |++|+|.+.+. ..++|++
T Consensus 265 l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~ 344 (506)
T PRK13549 265 LTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVP 344 (506)
T ss_pred CccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeC
Confidence 999994 23569999999999999999999999999999999999998 59999987542 2378999
Q ss_pred hhhh-hhcCCcccHHHHHHhc----CC-----CC--hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCC
Q 007982 437 QHLA-EKLDMDMSALQYMIKE----YP-----GN--EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 437 q~~~-~~~~~~~~~~~~~~~~----~~-----~~--~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 504 (582)
|... ..+....++.+++... +. .. ..+.+.++++.+++.....++++.+|||||||||+|||||+.+|
T Consensus 345 q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p 424 (506)
T PRK13549 345 EDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAIARLSGGNQQKAVLAKCLLLNP 424 (506)
T ss_pred cchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCcccccccCCHHHHHHHHHHHHHhhCC
Confidence 8753 1234456777766421 11 11 23457889999999633335677999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
++|||||||+|||+.++..+.+.|.++ +.|||+||||++++.++||++++|++|+++ +.|+.+++
T Consensus 425 ~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 492 (506)
T PRK13549 425 KILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLK-GDLINHNL 492 (506)
T ss_pred CEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEeccccC
Confidence 999999999999999999999887754 679999999999999999999999999996 57777766
No 16
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-78 Score=665.49 Aligned_cols=432 Identities=19% Similarity=0.257 Sum_probs=327.1
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHH-HHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEK-EAE 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~-~~~ 147 (582)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+|+|+|+.+|+.|.+. +++... .... ...
T Consensus 5 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~----~~g~~i~~~~~~~~~~~ 80 (510)
T PRK09700 5 YISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTIT----INNINYNKLDHKLAAQL 80 (510)
T ss_pred eEEEeeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEE----ECCEECCCCCHHHHHHC
Confidence 79999999999988999999999999999999999999999999999999988765432 111110 0000 111
Q ss_pred Hhcc--ccCC---CcchHHHHHHHHH------c---CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHH
Q 007982 148 ILGA--QEDG---GGEQLERVYERLE------A---LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARA 213 (582)
Q Consensus 148 ~~~~--~~~~---~~~~~~~~~~~l~------~---~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 213 (582)
.+++ +... .....+++..... . .+......++.++++.+|+.+ ..++++.+|||||||||+||||
T Consensus 81 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG~~qrv~ia~a 159 (510)
T PRK09700 81 GIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKV-DLDEKVANLSISHKQMLEIAKT 159 (510)
T ss_pred CeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCC-CcccchhhCCHHHHHHHHHHHH
Confidence 1222 2111 1122333321110 1 112334567889999999974 5688999999999999999999
Q ss_pred HhcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHH
Q 007982 214 LFINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSE 290 (582)
Q Consensus 214 L~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~ 290 (582)
|+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++ +.|+++++... +
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~~--~ 236 (510)
T PRK09700 160 LMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSV-CSGMVSDVSND--D 236 (510)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEe-eecchhhCCHH--H
Confidence 99999999999999999999999999998765 579999999999999999999999999996 56776654311 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEE
Q 007982 291 LEENQMKQYKWEQEQIASMKEYIARF-GHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQF 369 (582)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 369 (582)
.+..+ +... .. ...... . .......+++|++
T Consensus 237 ---------------------~~~~~~~~~~-----------------~~-~~~~~~-~--------~~~~~~~~~~l~~ 268 (510)
T PRK09700 237 ---------------------IVRLMVGREL-----------------QN-RFNAMK-E--------NVSNLAHETVFEV 268 (510)
T ss_pred ---------------------HHHHhcCCCc-----------------cc-cccccc-c--------ccccCCCCcEEEE
Confidence 00000 0000 00 000000 0 0000113468999
Q ss_pred EEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEEEech
Q 007982 370 VEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIAQFHQ 437 (582)
Q Consensus 370 ~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~~~~q 437 (582)
+|+++.|. .+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|
T Consensus 269 ~~l~~~~~---~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q 345 (510)
T PRK09700 269 RNVTSRDR---KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITE 345 (510)
T ss_pred eCccccCC---CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHHHHHCCcEEccC
Confidence 99998763 3899999999999999999999999999999999999999999987652 24789998
Q ss_pred hhh-hhcCCcccHHHHHHhcC--------------CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc
Q 007982 438 HLA-EKLDMDMSALQYMIKEY--------------PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 438 ~~~-~~~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
... ..+....++.+++.... .. .....+.++++.+|+.....++++.+|||||||||+|||||+
T Consensus 346 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~lAral~ 425 (510)
T PRK09700 346 SRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLC 425 (510)
T ss_pred ccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCccccCChHHHHHHHHHHHHh
Confidence 742 23444567777654211 00 112457789999999622345677999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
.+|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++.
T Consensus 426 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 489 (510)
T PRK09700 426 CCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQ 489 (510)
T ss_pred cCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEE
Confidence 999999999999999999999999998765 6799999999999999999999999999974
No 17
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.5e-78 Score=664.26 Aligned_cols=441 Identities=19% Similarity=0.242 Sum_probs=328.7
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHH-H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEA-E 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~-~ 147 (582)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++... ...... .
T Consensus 11 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~~~~~~~~~~~~~ 86 (510)
T PRK15439 11 LLCARSISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLE----IGGNPCARLTPAKAHQL 86 (510)
T ss_pred eEEEEeEEEEeCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEECCCCCHHHHHhC
Confidence 69999999999988999999999999999999999999999999999999988765432 221110 001111 1
Q ss_pred Hhc--cccCC---CcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 148 ILG--AQEDG---GGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 148 ~~~--~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
.++ ++... .....+++...+ ......++++.++++.+|+.. ..++++.+|||||||||+|||||+.+|++||
T Consensus 87 ~i~~v~q~~~~~~~~tv~e~l~~~~--~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~la~aL~~~p~lll 163 (510)
T PRK15439 87 GIYLVPQEPLLFPNLSVKENILFGL--PKRQASMQKMKQLLAALGCQL-DLDSSAGSLEVADRQIVEILRGLMRDSRILI 163 (510)
T ss_pred CEEEEeccCccCCCCcHHHHhhccc--ccchHHHHHHHHHHHHcCCCc-cccCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 122 22211 112222222111 112234567889999999974 4688999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHHHHHHHHHH
Q 007982 223 LDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSELEENQMKQY 299 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 299 (582)
|||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++++.....
T Consensus 164 LDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~~~~---------- 232 (510)
T PRK15439 164 LDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIA-LSGKTADLSTDDI---------- 232 (510)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecChHHcCHHHH----------
Confidence 99999999999999999998765 679999999999999999999999999997 4678776542100
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEecc---CCCCCCCeEEEEEEEEEe
Q 007982 300 KWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVD---VGKLPPPVLQFVEVTFGY 376 (582)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~l~~~y 376 (582)
. ..+. +.... ...... . ...+.++. .....+++|+++|+++
T Consensus 233 ------~---~~~~---~~~~~---~~~~~~-------------~------~~~~~~~~~~~~~~~~~~~l~~~~l~~-- 276 (510)
T PRK15439 233 ------I---QAIT---PAARE---KSLSAS-------------Q------KLWLELPGNRRQQAAGAPVLTVEDLTG-- 276 (510)
T ss_pred ------H---HHHh---Ccccc---cccccc-------------c------cccccccccccccCCCCceEEEeCCCC--
Confidence 0 0000 00000 000000 0 00000110 0012356899999983
Q ss_pred cCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEEEechhhh-hhc
Q 007982 377 TPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIAQFHQHLA-EKL 443 (582)
Q Consensus 377 ~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~~~~q~~~-~~~ 443 (582)
.+|+++||+|++|+++||+||||||||||+++|+|+++|++|+|.+.+. ..++|++|.+. ..+
T Consensus 277 ----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l 352 (510)
T PRK15439 277 ----EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGL 352 (510)
T ss_pred ----CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCc
Confidence 1589999999999999999999999999999999999999999987652 24789988742 223
Q ss_pred CCcccHHHHHHhc------C--C-CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCC
Q 007982 444 DMDMSALQYMIKE------Y--P-GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTN 514 (582)
Q Consensus 444 ~~~~~~~~~~~~~------~--~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~ 514 (582)
....++.+++... + . ....+.+.++++.+|+.....++++.+|||||||||+|||||+.+|+||||||||+
T Consensus 353 ~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~ 432 (510)
T PRK15439 353 YLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTR 432 (510)
T ss_pred cCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCc
Confidence 4445666654211 1 1 11234578899999996223356779999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 515 HLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 515 ~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|+++ +.|+.+++.
T Consensus 433 gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~-~~~~~~~~~ 491 (510)
T PRK15439 433 GVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEIS-GALTGAAIN 491 (510)
T ss_pred CcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEEccccCC
Confidence 99999999999998774 679999999999999999999999999997 466665544
No 18
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.2e-77 Score=657.49 Aligned_cols=442 Identities=22% Similarity=0.303 Sum_probs=322.7
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhcc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILGA 151 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 151 (582)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+|+|+|+.+|+.|.+...- ..............+++
T Consensus 3 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~-~~~~~~~~~~~~~~i~~ 81 (490)
T PRK10938 3 SLQISQGTFRLSDTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQF-SHITRLSFEQLQKLVSD 81 (490)
T ss_pred eEEEEeEEEEcCCeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECC-cccccCCHHHHHHHhce
Confidence 69999999999988899999999999999999999999999999999999988766542110 00000000111112221
Q ss_pred --ccCCCc--ch-----HHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 152 --QEDGGG--EQ-----LERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 152 --~~~~~~--~~-----~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
+..... .. ...+.+.+. . ....+.++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++||
T Consensus 82 ~~q~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~la~al~~~p~lll 158 (490)
T PRK10938 82 EWQRNNTDMLSPGEDDTGRTTAEIIQ-D-EVKDPARCEQLAQQFGITA-LLDRRFKYLSTGETRKTLLCQALMSEPDLLI 158 (490)
T ss_pred eccCcchhhcccchhhccccHHHhcc-c-chhHHHHHHHHHHHcCCHh-hhhCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 111100 00 011122111 1 1223567889999999964 5689999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHHHHHHHHHH
Q 007982 223 LDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSELEENQMKQY 299 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 299 (582)
|||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|+++++.....
T Consensus 159 LDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~~~~~---------- 227 (490)
T PRK10938 159 LDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAE-TGEREEILQQAL---------- 227 (490)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEE-eCCHHHHhcchh----------
Confidence 99999999999999999999876 5799999999999999999999999999974 466654431100
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEEEEEEecCC
Q 007982 300 KWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPD 379 (582)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~ 379 (582)
. .+... . . .+....... . .... . +.......++|+++|+++.|++
T Consensus 228 ------~-------~~~~~-~----------~----~~~~~~~~~-~-~~~~--~--~~~~~~~~~~l~~~~l~~~~~~- 272 (490)
T PRK10938 228 ------V-------AQLAH-S----------E----QLEGVQLPE-P-DEPS--A--RHALPANEPRIVLNNGVVSYND- 272 (490)
T ss_pred ------h-------hhhhh-h----------h----ccCccccCc-c-cccc--c--ccccCCCCceEEEeceEEEECC-
Confidence 0 00000 0 0 000000000 0 0000 0 0000123578999999999964
Q ss_pred ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-CCcEEEEcCc------------eeEEEechhhhhhcCCc
Q 007982 380 NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-LDGMVRRHNH------------LRIAQFHQHLAEKLDMD 446 (582)
Q Consensus 380 ~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-~~G~i~~~~~------------~~~~~~~q~~~~~~~~~ 446 (582)
+.+|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+.+. ..++|++|.........
T Consensus 273 ~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 352 (490)
T PRK10938 273 RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVS 352 (490)
T ss_pred eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccC
Confidence 5799999999999999999999999999999999998875 6999987542 23788888753222222
Q ss_pred ccHHHHHHhc-------CC---CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCC
Q 007982 447 MSALQYMIKE-------YP---GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHL 516 (582)
Q Consensus 447 ~~~~~~~~~~-------~~---~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~L 516 (582)
.++.+++... +. ....+.++++++.+|+.....++++.+|||||||||+|||||+.+|+||||||||+||
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gL 432 (490)
T PRK10938 353 TSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGL 432 (490)
T ss_pred CcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccC
Confidence 3444443211 11 1123467899999999862345677999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhc---C-ceEEEEecCHHHHHh-hcCEEEEEeCCeEEEE
Q 007982 517 DIETIDSLAEALNEW---D-GGLVLVSHDFRLINQ-VAHEIWVCENQAVTRW 563 (582)
Q Consensus 517 D~~~~~~l~~~l~~~---~-~tvi~vsHd~~~~~~-~~d~i~~l~~G~i~~~ 563 (582)
|+.++..+.+.|+++ + .|||+||||++++.. +||++++|++|+++.+
T Consensus 433 D~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~ 484 (490)
T PRK10938 433 DPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRY 484 (490)
T ss_pred CHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEe
Confidence 999999999998875 3 369999999999987 5999999999998754
No 19
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.6e-77 Score=657.35 Aligned_cols=440 Identities=19% Similarity=0.267 Sum_probs=326.0
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC--CCCceeeeeechHHHH---HHHH-H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS--DMSSLEAVISCDEERL---KLEK-E 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~--~~~~~~~~i~~~~~~~---~~~~-~ 145 (582)
.|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.++ +.|. +.+++... .... .
T Consensus 1 ~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~----i~~~g~~~~~~~~~~~~ 76 (500)
T TIGR02633 1 LLEMKGIVKTFGGVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGE----IYWSGSPLKASNIRDTE 76 (500)
T ss_pred CEEEEeEEEEeCCeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeE----EEECCEECCCCCHHHHH
Confidence 37899999999988999999999999999999999999999999999999875 4343 22222111 0001 1
Q ss_pred HHHhcc--ccCC---CcchHHHHHHHHHc------CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHH
Q 007982 146 AEILGA--QEDG---GGEQLERVYERLEA------LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARAL 214 (582)
Q Consensus 146 ~~~~~~--~~~~---~~~~~~~~~~~l~~------~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 214 (582)
...+++ +... .....+++...... ........++.++++.+|+.....++++.+|||||||||+|||||
T Consensus 77 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~al 156 (500)
T TIGR02633 77 RAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAKAL 156 (500)
T ss_pred hCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHHHH
Confidence 111222 2111 12233333221110 122344567889999999975433577999999999999999999
Q ss_pred hcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHH
Q 007982 215 FINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSEL 291 (582)
Q Consensus 215 ~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~ 291 (582)
+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++.+ ++.+++... .
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~-~~~~~~~~~--~- 232 (500)
T TIGR02633 157 NKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVAT-KDMSTMSED--D- 232 (500)
T ss_pred hhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeee-cCcccCCHH--H-
Confidence 9999999999999999999999999998764 67999999999999999999999999999753 443322100 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEE
Q 007982 292 EENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVE 371 (582)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 371 (582)
.+..+ ......... .. .....+.++|+++|
T Consensus 233 --------------------~~~~~---------------------~~~~~~~~~-~~--------~~~~~~~~~l~~~~ 262 (500)
T TIGR02633 233 --------------------IITMM---------------------VGREITSLY-PH--------EPHEIGDVILEARN 262 (500)
T ss_pred --------------------HHHHH---------------------hCccccccc-cc--------cccCCCCceEEEeC
Confidence 00000 000000000 00 00012346899999
Q ss_pred EEEEecC--CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-CCcEEEEcCc------------eeEEEec
Q 007982 372 VTFGYTP--DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-LDGMVRRHNH------------LRIAQFH 436 (582)
Q Consensus 372 l~~~y~~--~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-~~G~i~~~~~------------~~~~~~~ 436 (582)
+++.|++ +..+|+|+||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+.+. ..++|++
T Consensus 263 l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~ 342 (500)
T TIGR02633 263 LTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQAIRAGIAMVP 342 (500)
T ss_pred CcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHHHHhCCCEEcC
Confidence 9999842 34699999999999999999999999999999999999995 8999987541 2478999
Q ss_pred hhhh-hhcCCcccHHHHHHhc----CC---C-C---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCC
Q 007982 437 QHLA-EKLDMDMSALQYMIKE----YP---G-N---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 437 q~~~-~~~~~~~~~~~~~~~~----~~---~-~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 504 (582)
|.+. ..+....++.+++... +. . . ..+.+.++++.+++.....++++.+|||||||||+|||||+.+|
T Consensus 343 q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGqkqrv~la~al~~~p 422 (500)
T TIGR02633 343 EDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIGRLSGGNQQKAVLAKMLLTNP 422 (500)
T ss_pred cchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccccCCHHHHHHHHHHHHHhhCC
Confidence 8853 1234455666655321 10 0 1 23457889999999743345677999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
+||||||||+|||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|+++ .+++..++
T Consensus 423 ~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 490 (500)
T TIGR02633 423 RVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLK-GDFVNHAL 490 (500)
T ss_pred CEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEEccccC
Confidence 999999999999999999998877664 679999999999999999999999999996 45554444
No 20
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.6e-77 Score=656.18 Aligned_cols=432 Identities=20% Similarity=0.287 Sum_probs=326.5
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH----HHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL----KLEKEAE 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~ 147 (582)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++... .......
T Consensus 4 ~i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~----~~g~~~~~~~~~~~~~~ 79 (501)
T PRK10762 4 LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSIL----YLGKEVTFNGPKSSQEA 79 (501)
T ss_pred eEEEeeeEEEeCCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE----ECCEECCCCCHHHHHhC
Confidence 79999999999988999999999999999999999999999999999999988766432 221110 0000111
Q ss_pred Hhc--cccC---CCcchHHHHHHHHH------cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhc
Q 007982 148 ILG--AQED---GGGEQLERVYERLE------ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFI 216 (582)
Q Consensus 148 ~~~--~~~~---~~~~~~~~~~~~l~------~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~ 216 (582)
.++ ++.. ......+++..... ..+....+.++.++++.+|+.+ ..++++.+|||||||||+|||||+.
T Consensus 80 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~la~al~~ 158 (501)
T PRK10762 80 GIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRF-SSDKLVGELSIGEQQMVEIAKVLSF 158 (501)
T ss_pred CEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCC-CccCchhhCCHHHHHHHHHHHHHhc
Confidence 122 1211 11223333322111 1122334567889999999975 4688999999999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHHHH
Q 007982 217 NPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSELEE 293 (582)
Q Consensus 217 ~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~ 293 (582)
+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++. .|+.+++... .
T Consensus 159 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~~--~--- 232 (501)
T PRK10762 159 ESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIA-EREVADLTED--S--- 232 (501)
T ss_pred CCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-ecCcCcCCHH--H---
Confidence 99999999999999999999999888764 6799999999999999999999999999964 4544432110 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEEE
Q 007982 294 NQMKQYKWEQEQIASMKEYIARF-GHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVEV 372 (582)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 372 (582)
....+ +. ...... + ..+ ....+++|+++|+
T Consensus 233 ------------------~~~~~~~~----------------------~~~~~~-~------~~~--~~~~~~~l~~~~l 263 (501)
T PRK10762 233 ------------------LIEMMVGR----------------------KLEDQY-P------RLD--KAPGEVRLKVDNL 263 (501)
T ss_pred ------------------HHHHhcCC----------------------Cccccc-c------ccc--cCCCCcEEEEeCc
Confidence 00000 00 000000 0 000 0112468999999
Q ss_pred EEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEEEechhhh
Q 007982 373 TFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIAQFHQHLA 440 (582)
Q Consensus 373 ~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~~~~q~~~ 440 (582)
++ .+++|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|.+.
T Consensus 264 ~~------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~ 337 (501)
T PRK10762 264 SG------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRK 337 (501)
T ss_pred cc------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHHCCCEEecCccc
Confidence 84 2699999999999999999999999999999999999999999987652 24899999853
Q ss_pred -hhcCCcccHHHHHHhc----C-------CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 441 -EKLDMDMSALQYMIKE----Y-------PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 441 -~~~~~~~~~~~~~~~~----~-------~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
..+....++.+++... . .. ...++++++++.+|+.....++++.+|||||||||+|||||+.+|++|
T Consensus 338 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGekqrv~lA~al~~~p~ll 417 (501)
T PRK10762 338 RDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVL 417 (501)
T ss_pred cCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCchhhCCHHHHHHHHHHHHHhhCCCEE
Confidence 2234456777765321 1 00 123457889999999532335677999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
||||||+|||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|+++ ..|+..++
T Consensus 418 lLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 482 (501)
T PRK10762 418 ILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRIS-GEFTREQA 482 (501)
T ss_pred EEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEE-EEeccccC
Confidence 999999999999999999998876 469999999999999999999999999986 46666655
No 21
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-77 Score=654.26 Aligned_cols=436 Identities=21% Similarity=0.245 Sum_probs=325.9
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH----HHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL----KLEKEAE 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~ 147 (582)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++... .......
T Consensus 4 ~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~----~~g~~i~~~~~~~~~~~ 79 (501)
T PRK11288 4 YLSFDGIGKTFPGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSIL----IDGQEMRFASTTAALAA 79 (501)
T ss_pred eEEEeeeEEEECCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEE----ECCEECCCCCHHHHHhC
Confidence 79999999999988999999999999999999999999999999999999988766532 111110 0001111
Q ss_pred Hhcc--ccC---CCcchHHHHHHHHH----c-CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 148 ILGA--QED---GGGEQLERVYERLE----A-LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 148 ~~~~--~~~---~~~~~~~~~~~~l~----~-~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
.+++ |.. ......+++..... . .+......++.++++.+|+.. ..++++.+|||||||||+|||||+.+
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGq~qrv~laral~~~ 158 (501)
T PRK11288 80 GVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDI-DPDTPLKYLSIGQRQMVEIAKALARN 158 (501)
T ss_pred CEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCC-CcCCchhhCCHHHHHHHHHHHHHHhC
Confidence 1221 211 11223333322110 1 123445567889999999974 45789999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHHHHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSELEEN 294 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~ 294 (582)
|+||||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++.....+... ....
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~--~~~~---- 232 (501)
T PRK11288 159 ARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQV--DRDQ---- 232 (501)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccC--CHHH----
Confidence 9999999999999999999999998765 579999999999999999999999999986422111100 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEEEEE
Q 007982 295 QMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVEVTF 374 (582)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 374 (582)
....+ ....... .. ... +....+++++++|+++
T Consensus 233 -----------------~~~~~---------------------~~~~~~~-~~-------~~~-~~~~~~~~l~~~~~~~ 265 (501)
T PRK11288 233 -----------------LVQAM---------------------VGREIGD-IY-------GYR-PRPLGEVRLRLDGLKG 265 (501)
T ss_pred -----------------HHHHh---------------------cCCCccc-cc-------ccc-ccCCCCcEEEEecccc
Confidence 00000 0000000 00 000 0011245799999984
Q ss_pred EecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEEEechhhh-h
Q 007982 375 GYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIAQFHQHLA-E 441 (582)
Q Consensus 375 ~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~~~~q~~~-~ 441 (582)
. .+++|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|... .
T Consensus 266 ~-----~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 340 (501)
T PRK11288 266 P-----GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAE 340 (501)
T ss_pred C-----CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhC
Confidence 2 4899999999999999999999999999999999999999999987642 24788888753 2
Q ss_pred hcCCcccHHHHHHhcC-----------CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 007982 442 KLDMDMSALQYMIKEY-----------PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLL 509 (582)
Q Consensus 442 ~~~~~~~~~~~~~~~~-----------~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 509 (582)
.+....++.+++.... .. ...+.++++++.+|+.....++++.+|||||||||+|||+|+.+|+||||
T Consensus 341 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrl~la~al~~~p~lllL 420 (501)
T PRK11288 341 GIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILL 420 (501)
T ss_pred CCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCccccCCHHHHHHHHHHHHHccCCCEEEE
Confidence 2444567777653210 11 11245788999999953334567799999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 510 DEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 510 DEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
||||+|||+.++..+.++|.++ +.|||+||||++++..+||++++|++|+++ ..|+++++.
T Consensus 421 DEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~ 484 (501)
T PRK11288 421 DEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIA-GELAREQAT 484 (501)
T ss_pred cCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEE-EEEccccCC
Confidence 9999999999999999988654 679999999999999999999999999987 467666654
No 22
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-75 Score=641.74 Aligned_cols=433 Identities=20% Similarity=0.252 Sum_probs=318.5
Q ss_pred EeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH----HHHHHHHHhc
Q 007982 75 IESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL----KLEKEAEILG 150 (582)
Q Consensus 75 v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~ 150 (582)
++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++... ........++
T Consensus 1 ~~nl~~~~~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~~~~~~~~~~~~~~i~ 76 (491)
T PRK10982 1 MSNISKSFPGVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSIL----FQGKEIDFKSSKEALENGIS 76 (491)
T ss_pred CCceEEEeCCEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEE----ECCEECCCCCHHHHHhCCEE
Confidence 36899999999999999999999999999999999999999999999988765432 222111 0001111122
Q ss_pred c--ccCC---CcchHHHHHHHHH---c--CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCc
Q 007982 151 A--QEDG---GGEQLERVYERLE---A--LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTI 220 (582)
Q Consensus 151 ~--~~~~---~~~~~~~~~~~l~---~--~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~l 220 (582)
+ +... .....+++..... . .+......++.++++.+|+.. ..++++.+|||||||||+|||||+.+|++
T Consensus 77 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGq~qrv~lA~al~~~p~l 155 (491)
T PRK10982 77 MVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDI-DPRAKVATLSVSQMQMIEIAKAFSYNAKI 155 (491)
T ss_pred EEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCC-CccCchhhCCHHHHHHHHHHHHHHhCCCE
Confidence 1 2111 1123333321111 1 122334567889999999974 46789999999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHHHHHHHH
Q 007982 221 LLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSELEENQMK 297 (582)
Q Consensus 221 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~~~~ 297 (582)
|||||||++||+.++.+|.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.++... .+
T Consensus 156 llLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~--~~------- 225 (491)
T PRK10982 156 VIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIA-TQPLAGLTM--DK------- 225 (491)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEe-ecChhhCCH--HH-------
Confidence 9999999999999999999998765 6799999999999999999999999999974 454433210 00
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEecc-CCCCCCCeEEEEEEEEEe
Q 007982 298 QYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVD-VGKLPPPVLQFVEVTFGY 376 (582)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~y 376 (582)
.... +....... .++. .....+++|+++|+++.|
T Consensus 226 --------------~~~~---------------------~~~~~~~~----------~~~~~~~~~~~~~i~~~~l~~~~ 260 (491)
T PRK10982 226 --------------IIAM---------------------MVGRSLTQ----------RFPDKENKPGEVILEVRNLTSLR 260 (491)
T ss_pred --------------HHHH---------------------HhCCCccc----------ccccccCCCCCcEEEEeCccccc
Confidence 0000 00000000 0000 001124689999999875
Q ss_pred cCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEEEechhhh-hhc
Q 007982 377 TPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIAQFHQHLA-EKL 443 (582)
Q Consensus 377 ~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~~~~q~~~-~~~ 443 (582)
+.+|+++||+|++||++||+||||||||||+++|+|+++|++|+|.+.+. ..++|++|... ..+
T Consensus 261 ---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~ 337 (491)
T PRK10982 261 ---QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGI 337 (491)
T ss_pred ---CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCc
Confidence 35899999999999999999999999999999999999999999987652 12678877642 112
Q ss_pred CCcccHH-----HHHHhc---C---CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 444 DMDMSAL-----QYMIKE---Y---PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 444 ~~~~~~~-----~~~~~~---~---~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
....++. +++... + .. .....++++++.+++.....++++.+|||||||||+|||+++.+|+||||||
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~illLDE 417 (491)
T PRK10982 338 YAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDE 417 (491)
T ss_pred ccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccccccCCcHHHHHHHHHHHHhcCCCEEEEcC
Confidence 2223322 222111 1 11 1234578899999996333456779999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHh---cCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 512 PTNHLDIETIDSLAEALNE---WDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~---~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
||+|||+.++..+.+.|++ .+.|||+||||++++..+|||+++|++|+++. .++...|.
T Consensus 418 Pt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~-~~~~~~~~ 479 (491)
T PRK10982 418 PTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAG-IVDTKTTT 479 (491)
T ss_pred CCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEE-EEccccCC
Confidence 9999999999999888855 47899999999999999999999999999974 44434443
No 23
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2e-73 Score=572.72 Aligned_cols=448 Identities=24% Similarity=0.329 Sum_probs=349.5
Q ss_pred ceEEeeeEEEEC----CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCC-ceeeeeechHHHHH-H-HH
Q 007982 72 DIRIESLSVTFH----GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMS-SLEAVISCDEERLK-L-EK 144 (582)
Q Consensus 72 ~i~v~nls~~y~----~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~-~~~~~i~~~~~~~~-~-~~ 144 (582)
.|+++||++.|+ ...+++++||+|++||.++|||+||||||-..+.|.++.+.... ..++.+.+++...- . +.
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 689999999996 56899999999999999999999999999999999988875322 12334555544331 0 11
Q ss_pred HHH-----Hhc--cccCCCc-c-------hHHHHHHHHHcCChhHHHHHHHHHHHhCCCCh--hhhhccCCCCChhHHHH
Q 007982 145 EAE-----ILG--AQEDGGG-E-------QLERVYERLEALDASTAEKRAAEILYGLGFNK--TMQAKKTRDFSGGWRMR 207 (582)
Q Consensus 145 ~~~-----~~~--~~~~~~~-~-------~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~--~~~~~~~~~LSGGqrqR 207 (582)
... .+. +|.+... . ++.+.......+....++.++.++|+.+|+.+ ...+.+|++||||||||
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p~~rl~~yPHeLSGGqRQR 165 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEPEKRLDAYPHELSGGQRQR 165 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCchhhhhhhCCcccCcchhhH
Confidence 111 121 3333221 1 12223333346677888999999999999963 45678999999999999
Q ss_pred HHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhH
Q 007982 208 IALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQ 283 (582)
Q Consensus 208 v~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 283 (582)
|+||.||+.+|++||.||||++||.....+++++|+++ +..+++||||+..+..++|||+||.+|+++. .|..++
T Consensus 166 VMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE-~~~t~~ 244 (534)
T COG4172 166 VMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVE-TGTTET 244 (534)
T ss_pred HHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEee-cCcHHH
Confidence 99999999999999999999999999999999998764 7899999999999999999999999999974 555444
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCC
Q 007982 284 YVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLP 363 (582)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (582)
.+. ...|.|.+.- ++. +..+.. +......
T Consensus 245 lF~----------------------------~PqHpYTr~L---------l~a-eP~g~~-------------~p~~~~~ 273 (534)
T COG4172 245 LFA----------------------------APQHPYTRKL---------LAA-EPSGDP-------------PPLPEDA 273 (534)
T ss_pred Hhh----------------------------CCCChHHHHH---------Hhc-CCCCCC-------------CCCCCCC
Confidence 332 1112122110 000 000100 0111224
Q ss_pred CCeEEEEEEEEEecCC----------ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----
Q 007982 364 PPVLQFVEVTFGYTPD----------NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~----------~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---- 429 (582)
+++++.+++.++|+-. ..+++++||++++|+.+||||.+|||||||-..|.+++++. |.|++.+.
T Consensus 274 ~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~I~F~G~~i~~ 352 (534)
T COG4172 274 PVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GEIRFDGQDIDG 352 (534)
T ss_pred CceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ceEEECCccccc
Confidence 6789999999998621 24789999999999999999999999999999999999776 99988653
Q ss_pred ----------eeEEEechhhhhhcCCcccHHHHHHhcC----CC----ChHHHHHHHHHhcCCCCccccCCCCCCChhHH
Q 007982 430 ----------LRIAQFHQHLAEKLDMDMSALQYMIKEY----PG----NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQR 491 (582)
Q Consensus 430 ----------~~~~~~~q~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqk 491 (582)
.++..++|++...+++.+++.+.+.... +. ...+++.++|..+||+.....+.+++.|||||
T Consensus 353 ~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~r~RYPhEFSGGQR 432 (534)
T COG4172 353 LSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPATRNRYPHEFSGGQR 432 (534)
T ss_pred cChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhHhhcCCcccCcchh
Confidence 2467789998888888898887765432 11 13467899999999988665566699999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCH
Q 007982 492 SRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDI 567 (582)
Q Consensus 492 qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 567 (582)
||++||||++.+|++++||||||+||..-...+.++|+++ +.+-++||||+..+..+||+|+||.+|+|++ .|+.
T Consensus 433 QRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE-~G~~ 511 (534)
T COG4172 433 QRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALCHRVIVMRDGKIVE-QGPT 511 (534)
T ss_pred hHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhhceEEEEeCCEEee-eCCH
Confidence 9999999999999999999999999999998888888765 5799999999999999999999999999987 8998
Q ss_pred HHHHHH
Q 007982 568 MDFKLH 573 (582)
Q Consensus 568 ~~~~~~ 573 (582)
++++.+
T Consensus 512 ~~if~~ 517 (534)
T COG4172 512 EAVFAN 517 (534)
T ss_pred HHHhcC
Confidence 888764
No 24
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=9.6e-72 Score=619.33 Aligned_cols=429 Identities=21% Similarity=0.285 Sum_probs=313.3
Q ss_pred eeEEEECCe-eeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeec-------hHHHHH-HHHHH-
Q 007982 77 SLSVTFHGH-DLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISC-------DEERLK-LEKEA- 146 (582)
Q Consensus 77 nls~~y~~~-~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~-------~~~~~~-~~~~~- 146 (582)
+++++|+++ .+|.+++ .+++|+++||+||||||||||+|+|+|+.+|+.|.+.....+ .+.... .....
T Consensus 78 ~~~~~yg~~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~~~ 156 (590)
T PRK13409 78 EPVHRYGVNGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKKLY 156 (590)
T ss_pred CceEEecCCceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHHHh
Confidence 479999874 6999999 999999999999999999999999999998887665321111 111111 00000
Q ss_pred H---Hhc--cccCCCcch--HHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCC
Q 007982 147 E---ILG--AQEDGGGEQ--LERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPT 219 (582)
Q Consensus 147 ~---~~~--~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~ 219 (582)
. .+. .+....... ...+.+.+.. .....++.++++.+||.. ..++++.+|||||||||+||+||+.+|+
T Consensus 157 ~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~---~~~~~~~~~~l~~l~l~~-~~~~~~~~LSgGe~qrv~ia~al~~~p~ 232 (590)
T PRK13409 157 NGEIKVVHKPQYVDLIPKVFKGKVRELLKK---VDERGKLDEVVERLGLEN-ILDRDISELSGGELQRVAIAAALLRDAD 232 (590)
T ss_pred ccCcceeecccchhhhhhhhcchHHHHHHh---hhHHHHHHHHHHHcCCch-hhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 0 011 010000000 0022222221 223457889999999974 5689999999999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHHHHHHHH
Q 007982 220 ILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSELEENQMK 297 (582)
Q Consensus 220 lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~~~~ 297 (582)
+|||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|+++. |.|..+...... .
T Consensus 233 lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~~-----g~~g~~~~~~~~-~----- 301 (590)
T PRK13409 233 FYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGEP-----GAYGVVSKPKGV-R----- 301 (590)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc-----cccceecchhHH-H-----
Confidence 99999999999999999999999877 7899999999999999999999998641 111111100000 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCC--CCCCCeEEEEEEEEE
Q 007982 298 QYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVG--KLPPPVLQFVEVTFG 375 (582)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~l~~~ 375 (582)
..+..+...+.. . + .+. +. .....|.++... ....++|+++|+++.
T Consensus 302 ---------~~i~~~~~~~~~-------~----e----~~~---~~-----~~~~~~~~~~~~~~~~~~~~l~~~~ls~~ 349 (590)
T PRK13409 302 ---------VGINEYLKGYLP-------E----E----NMR---IR-----PEPIEFEERPPRDESERETLVEYPDLTKK 349 (590)
T ss_pred ---------HhHHHHHHhcch-------h----h----hhh---cc-----ccCcceecCCCccccCCceEEEEcceEEE
Confidence 000111111100 0 0 000 00 000111111111 123578999999999
Q ss_pred ecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCcccHHHHHHh
Q 007982 376 YTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMDMSALQYMIK 455 (582)
Q Consensus 376 y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~ 455 (582)
|++ . .|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+. ..++|++|+.. .....|+.+++..
T Consensus 350 ~~~-~-~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~--~~i~y~~Q~~~--~~~~~tv~e~l~~ 423 (590)
T PRK13409 350 LGD-F-SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE--LKISYKPQYIK--PDYDGTVEDLLRS 423 (590)
T ss_pred ECC-E-EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe--eeEEEeccccc--CCCCCcHHHHHHH
Confidence 964 3 5899999999999999999999999999999999999999999875 57999999864 3456788877653
Q ss_pred cCC-CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---
Q 007982 456 EYP-GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--- 531 (582)
Q Consensus 456 ~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--- 531 (582)
... ......+.++++.+||... .++++.+|||||||||+|||||+.+|+||||||||+|||+.++..+.++|+++
T Consensus 424 ~~~~~~~~~~~~~~L~~l~l~~~-~~~~~~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~ 502 (590)
T PRK13409 424 ITDDLGSSYYKSEIIKPLQLERL-LDKNVKDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEE 502 (590)
T ss_pred HhhhcChHHHHHHHHHHCCCHHH-HhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh
Confidence 211 1123356889999999854 45678999999999999999999999999999999999999999999999876
Q ss_pred -CceEEEEecCHHHHHhhcCEEEEEeCCeEE
Q 007982 532 -DGGLVLVSHDFRLINQVAHEIWVCENQAVT 561 (582)
Q Consensus 532 -~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 561 (582)
+.|||+||||++++..+||||++|++ ++.
T Consensus 503 ~g~tviivsHD~~~~~~~aDrvivl~~-~~~ 532 (590)
T PRK13409 503 REATALVVDHDIYMIDYISDRLMVFEG-EPG 532 (590)
T ss_pred CCCEEEEEeCCHHHHHHhCCEEEEEcC-cce
Confidence 67999999999999999999999965 654
No 25
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.2e-68 Score=560.22 Aligned_cols=428 Identities=22% Similarity=0.309 Sum_probs=332.4
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH--HHHHHHHh
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK--LEKEAEIL 149 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~ 149 (582)
.++++|++|+|++..+|+++||+|.+||+++|+|.||||||||+|+|+|.++|+.|.+ .+++.... -.......
T Consensus 8 ll~~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I----~~~G~~~~~~sp~~A~~~ 83 (500)
T COG1129 8 LLELRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEI----LIDGKPVAFSSPRDALAA 83 (500)
T ss_pred eeeeecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceE----EECCEEccCCCHHHHHhC
Confidence 6899999999999999999999999999999999999999999999999999987643 23322211 11111111
Q ss_pred c----cccC---CCcchHHHHHHH------HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhc
Q 007982 150 G----AQED---GGGEQLERVYER------LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFI 216 (582)
Q Consensus 150 ~----~~~~---~~~~~~~~~~~~------l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~ 216 (582)
+ +|.. +...+.++++-. +..++....+.++.++|..+|+... .+.++.+||+||||.|+|||||..
T Consensus 84 GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-~~~~v~~LsiaqrQ~VeIArAl~~ 162 (500)
T COG1129 84 GIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-PDTLVGDLSIAQRQMVEIARALSF 162 (500)
T ss_pred CcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-hhhhhhhCCHHHHHHHHHHHHHhc
Confidence 1 2222 223344444321 1124667888999999999999644 678999999999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCC-hhHHHHhHHHHH
Q 007982 217 NPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGN-FDQYVQTRSELE 292 (582)
Q Consensus 217 ~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~-~~~~~~~~~~~~ 292 (582)
+++||||||||++|+....+.|+++++++ |.++|+|||.++++.++||||.||++|+++.. .+ ..++.
T Consensus 163 ~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~-~~~~~~~~------- 234 (500)
T COG1129 163 DARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGT-RPTAAETS------- 234 (500)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeee-cccccCCC-------
Confidence 99999999999999999999999988765 67999999999999999999999999998632 22 11110
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEEE
Q 007982 293 ENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVEV 372 (582)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 372 (582)
.......|.+..+...+.. +......+|+++++++
T Consensus 235 -------------------------------------~~~lv~~MvGr~~~~~~~~--------~~~~~~~~~~l~v~~l 269 (500)
T COG1129 235 -------------------------------------EDELVRLMVGRELEDLFPE--------PPEEGIGEPVLEVRNL 269 (500)
T ss_pred -------------------------------------HHHHHHHhhCcchhhhccc--------ccccCCCCcEEEEecC
Confidence 0112223333222111110 0011234688999999
Q ss_pred EEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCce------------eEEEechhhh
Q 007982 373 TFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHL------------RIAQFHQHLA 440 (582)
Q Consensus 373 ~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~------------~~~~~~q~~~ 440 (582)
+.. ..++|+||++++||++||.|-=|||+|.|+++|.|..++.+|+|..++.. .++|++.+..
T Consensus 270 ~~~-----~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk 344 (500)
T COG1129 270 SGG-----GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRK 344 (500)
T ss_pred CCC-----CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHHHHcCCEeCCcccc
Confidence 853 15789999999999999999999999999999999999999999987641 3677766532
Q ss_pred -hhcCCcccHHHHHHh----c------CC-CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 007982 441 -EKLDMDMSALQYMIK----E------YP-GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLL 508 (582)
Q Consensus 441 -~~~~~~~~~~~~~~~----~------~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 508 (582)
+.+.+..++.+|+.. . .. ..+.+.++++.+.+++.......++.+||||+||||+|||+|+.+|++||
T Consensus 345 ~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~~LSGGNQQKVvlarwL~~~p~vLi 424 (500)
T COG1129 345 SEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIGTLSGGNQQKVVLARWLATDPKVLI 424 (500)
T ss_pred cCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhhcCCchhhhhHHHHHHHhcCCCEEE
Confidence 344455555555421 1 11 11345678889999998776678999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 509 LDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 509 LDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
|||||.|+|..++.+++++|+++ |.+||+||.|++++..+||||+||.+|+++.
T Consensus 425 lDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~ 481 (500)
T COG1129 425 LDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVG 481 (500)
T ss_pred ECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEE
Confidence 99999999999999999999876 6799999999999999999999999999974
No 26
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-66 Score=588.58 Aligned_cols=201 Identities=28% Similarity=0.373 Sum_probs=173.7
Q ss_pred EEEEEEEEEecC--CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 367 LQFVEVTFGYTP--DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 367 l~~~~l~~~y~~--~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
|+++||+|+||. +.++|+|+||+|++|+.+|||||+||||||++.+|-.+|.|++|.|..++. .+++
T Consensus 988 I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~ 1067 (1228)
T KOG0055|consen 988 IEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIG 1067 (1228)
T ss_pred EEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcc
Confidence 899999999984 346999999999999999999999999999999999999999999998763 2478
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~~ 503 (582)
.+.|.+. -+..|+.+++..+......+++.++++..+..++....| ..+||||||||++||||++++
T Consensus 1068 lVsQEP~---LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRn 1144 (1228)
T KOG0055|consen 1068 LVSQEPV---LFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRN 1144 (1228)
T ss_pred eeccCch---hhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcC
Confidence 8888764 367799999887643346677888877665544332222 469999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|+||||||.||+||.++.+.+.++|.+. ++|.|+|.|.+..+ +-||.|+|+++|+|++ .|+-+++..
T Consensus 1145 PkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTI-qnaD~I~Vi~~G~VvE-~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1145 PKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTI-QNADVIAVLKNGKVVE-QGTHDELLA 1213 (1228)
T ss_pred CCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhh-hcCCEEEEEECCEEEe-cccHHHHHh
Confidence 9999999999999999999999999986 67999999999999 6799999999999987 899998876
No 27
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=6.8e-64 Score=519.10 Aligned_cols=432 Identities=22% Similarity=0.317 Sum_probs=338.0
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHH--HHHHH--
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKL--EKEAE-- 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~-- 147 (582)
.|++++++|.|++..++++|||+|.+||+.+|+|+||||||||+++|.|++.|+.|.+ .+++....+ .....
T Consensus 4 ~l~~~~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI----~v~G~~v~~~sP~dA~~~ 79 (501)
T COG3845 4 ALEMRGITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEI----RVDGKEVRIKSPRDAIRL 79 (501)
T ss_pred eEEEeccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceE----EECCEEeccCCHHHHHHc
Confidence 5899999999999999999999999999999999999999999999999999996643 333332211 11111
Q ss_pred Hhc--cccC---CCcchHHHHHHHHH-----cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 148 ILG--AQED---GGGEQLERVYERLE-----ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 148 ~~~--~~~~---~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
-++ +|.. +..++.+++.-..+ .++....++++.++.+++||+-+ .+.++.+||-||||||.|.+||.++
T Consensus 80 GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vd-p~~~V~dLsVG~qQRVEIlKaLyr~ 158 (501)
T COG3845 80 GIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVD-PDAKVADLSVGEQQRVEILKALYRG 158 (501)
T ss_pred CCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCC-ccceeecCCcchhHHHHHHHHHhcC
Confidence 122 2221 23344555543322 23566788999999999999754 5789999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHHHHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSELEEN 294 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~ 294 (582)
|++|||||||+-|-|...+.|++.|+++ |+|||+|||.++++.++|||+.||+.|+++ |.++....+
T Consensus 159 a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvv---gt~~~~~~~------- 228 (501)
T COG3845 159 ARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVV---GTVDPVAET------- 228 (501)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEE---eeecCCCCC-------
Confidence 9999999999999999999999998765 789999999999999999999999999975 333311000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEEEEE
Q 007982 295 QMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVEVTF 374 (582)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 374 (582)
+......-|.+........ . .+....+++|++++++.
T Consensus 229 ----------------------------------t~~ela~lMvG~~v~~~~~--------~-~~~~pg~~vL~V~~L~v 265 (501)
T COG3845 229 ----------------------------------TEEELAELMVGREVVLRVV--------K-PPSTPGEVVLEVEDLSV 265 (501)
T ss_pred ----------------------------------CHHHHHHHhcCCccccccc--------c-CCCCCCCeEEEEeeeEe
Confidence 0001112233322221111 0 11223478999999998
Q ss_pred EecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCce-------------eEEEechhh-h
Q 007982 375 GYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHL-------------RIAQFHQHL-A 440 (582)
Q Consensus 375 ~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~-------------~~~~~~q~~-~ 440 (582)
.-..+...++++||+|++||++||.|-.|.|.+.|+.+|+|+.+|.+|+|...+.. .++|+|.+. .
T Consensus 266 ~~~~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~ 345 (501)
T COG3845 266 KDRRGVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHG 345 (501)
T ss_pred ecCCCCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHHhcCCccCChhhcc
Confidence 75433468999999999999999999999999999999999999999999887642 356776654 3
Q ss_pred hhcCCcccHHHHHHhc-CC-----C---C----hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 441 EKLDMDMSALQYMIKE-YP-----G---N----EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 441 ~~~~~~~~~~~~~~~~-~~-----~---~----~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
..+.++.++.+++... +. . . ....++++++.|++.......|..+||||++||+.+||-|..+|++|
T Consensus 346 ~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~~a~~LSGGNqQK~IlaREl~~~p~lL 425 (501)
T COG3845 346 HGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPDAPARSLSGGNQQKLILARELARRPDLL 425 (501)
T ss_pred CccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCCcchhhcCCcceehhhhhhhhccCCCEE
Confidence 4556677777775421 11 0 1 13457888999999765566788999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEE
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVT 561 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 561 (582)
|+.+||.|||..+.+.+.+.|.+. |.+|++||-|++++..+||||.||.+|+++
T Consensus 426 I~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~ 482 (501)
T COG3845 426 IAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIV 482 (501)
T ss_pred EEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCcee
Confidence 999999999999999999988654 678999999999999999999999999996
No 28
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.6e-61 Score=582.34 Aligned_cols=203 Identities=24% Similarity=0.344 Sum_probs=173.7
Q ss_pred eEEEEEEEEEecC--CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC------------------------
Q 007982 366 VLQFVEVTFGYTP--DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP------------------------ 419 (582)
Q Consensus 366 ~l~~~~l~~~y~~--~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p------------------------ 419 (582)
-|+++||+|+|++ +.++|+|+||+|++|+++|||||||||||||+++|.|+++|
T Consensus 1165 ~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~ 1244 (1466)
T PTZ00265 1165 KIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQG 1244 (1466)
T ss_pred eEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccc
Confidence 4999999999973 34799999999999999999999999999999999999998
Q ss_pred ------------------------------CCcEEEEcCc-----------eeEEEechhhhhhcCCcccHHHHHHhcCC
Q 007982 420 ------------------------------LDGMVRRHNH-----------LRIAQFHQHLAEKLDMDMSALQYMIKEYP 458 (582)
Q Consensus 420 ------------------------------~~G~i~~~~~-----------~~~~~~~q~~~~~~~~~~~~~~~~~~~~~ 458 (582)
++|+|..++. ..++|++|.+. -+..|+.+++....+
T Consensus 1245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~---LF~gTIreNI~~g~~ 1321 (1466)
T PTZ00265 1245 DEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPM---LFNMSIYENIKFGKE 1321 (1466)
T ss_pred ccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCc---cccccHHHHHhcCCC
Confidence 5999988763 25899999863 357899999876655
Q ss_pred CChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 007982 459 GNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEAL 528 (582)
Q Consensus 459 ~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l 528 (582)
....+++.++++..++.++....| ...||||||||++|||||+++|+||||||||++||.++...+.+.|
T Consensus 1322 ~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L 1401 (1466)
T PTZ00265 1322 DATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTI 1401 (1466)
T ss_pred CCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHH
Confidence 556677888888887755433222 3579999999999999999999999999999999999999999999
Q ss_pred Hhc----CceEEEEecCHHHHHhhcCEEEEEeC----CeEEEEcCCHHHHHH
Q 007982 529 NEW----DGGLVLVSHDFRLINQVAHEIWVCEN----QAVTRWEGDIMDFKL 572 (582)
Q Consensus 529 ~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~----G~i~~~~g~~~~~~~ 572 (582)
.+. +.|+|+|||++..+. .||+|+||++ |+++.-.|+.+++.+
T Consensus 1402 ~~~~~~~~~TvIiIaHRlsti~-~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1402 VDIKDKADKTIITIAHRIASIK-RSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred HHHhccCCCEEEEEechHHHHH-hCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 876 579999999999984 6999999999 896545899888764
No 29
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.1e-59 Score=562.31 Aligned_cols=207 Identities=24% Similarity=0.276 Sum_probs=176.1
Q ss_pred CeEEEEEEEEEecC-CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEE
Q 007982 365 PVLQFVEVTFGYTP-DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIA 433 (582)
Q Consensus 365 ~~l~~~~l~~~y~~-~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~ 433 (582)
.+|+++|+++.|++ .+.+++|+||+|.+||++||+||||||||||+|+|+|+++|++|+|...+. ..+|
T Consensus 1936 ~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~~~~~~r~~IG 2015 (2272)
T TIGR01257 1936 DILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTNISDVHQNMG 2015 (2272)
T ss_pred ceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcchHHHHhhhEE
Confidence 36899999999974 257999999999999999999999999999999999999999999987652 2489
Q ss_pred EechhhhhhcCCcccHHHHHHh-----cCCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 434 QFHQHLAEKLDMDMSALQYMIK-----EYPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
|++|... +....|+.+++.. ..+.. ..+.+.++++.+||.... ++++++|||||||||+||+||+.+|+||
T Consensus 2016 y~pQ~~~--L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~-dk~~~~LSGGqKqRLslA~ALi~~P~VL 2092 (2272)
T TIGR01257 2016 YCPQFDA--IDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYA-DRLAGTYSGGNKRKLSTAIALIGCPPLV 2092 (2272)
T ss_pred EEecccc--CCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHh-cCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999753 4445677776532 11211 234567889999997654 4667999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHHH
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHLK 575 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~ 575 (582)
||||||+|||+.+++.+.+.|.+. +.|||++||++++++.+||||++|++|++. ..|++++++....
T Consensus 2093 LLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~-~~Gs~q~Lk~~~g 2162 (2272)
T TIGR01257 2093 LLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQ-CLGTIQHLKSKFG 2162 (2272)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHHHhC
Confidence 999999999999999999998764 579999999999999999999999999997 4899998876654
No 30
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.9e-60 Score=572.81 Aligned_cols=201 Identities=20% Similarity=0.271 Sum_probs=171.2
Q ss_pred eEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 366 VLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
.|+++||+|+|+++ +++|+|+||+|++||++||||++|||||||+++|.|+++|++|+|..++. .+++
T Consensus 1234 ~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~ 1313 (1495)
T PLN03232 1234 SIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLS 1313 (1495)
T ss_pred cEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcE
Confidence 49999999999644 57999999999999999999999999999999999999999999988763 2589
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~~ 503 (582)
+++|++. -++-|+.+++... ...+.+++.++++..++.+.....| ...||||||||++|||||+++
T Consensus 1314 iVpQdp~---LF~gTIr~NL~~~-~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~ 1389 (1495)
T PLN03232 1314 IIPQSPV---LFSGTVRFNIDPF-SEHNDADLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRR 1389 (1495)
T ss_pred EECCCCe---eeCccHHHHcCCC-CCCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhC
Confidence 9999863 2456888887432 2335667888888887754332222 357999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|+||||||||++||.++...+.+.|++. ++|||+|+|+++.+.. ||+|+||++|+|++ .|+++++.+
T Consensus 1390 ~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE-~Gt~~eLl~ 1458 (1495)
T PLN03232 1390 SKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIID-CDKILVLSSGQVLE-YDSPQELLS 1458 (1495)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHh-CCEEEEEECCEEEE-ECCHHHHHh
Confidence 9999999999999999999999999875 5799999999999965 99999999999987 788888764
No 31
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.2e-59 Score=571.08 Aligned_cols=201 Identities=19% Similarity=0.262 Sum_probs=171.4
Q ss_pred eEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 366 VLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
-|+++||+|+|+++ +++|+|+||+|++||++||||++|||||||+++|.|+++|++|+|..++. .+++
T Consensus 1237 ~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~Is 1316 (1622)
T PLN03130 1237 SIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLG 1316 (1622)
T ss_pred cEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccE
Confidence 59999999999654 47999999999999999999999999999999999999999999998763 3589
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~~ 503 (582)
+++|++. -+.-|+.+++... ...+++++.++++..++.+.....| ...||||||||++|||||+++
T Consensus 1317 iVpQdp~---LF~GTIreNLd~~-~~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~ 1392 (1622)
T PLN03130 1317 IIPQAPV---LFSGTVRFNLDPF-NEHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRR 1392 (1622)
T ss_pred EECCCCc---cccccHHHHhCcC-CCCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcC
Confidence 9999863 2456888887432 2335667888888877754332222 358999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|+||||||||++||.++...|.+.|++. ++|||+|+|+++.+.. ||+|+||++|+|++ .|+++++.+
T Consensus 1393 p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~-~DrIlVLd~G~IvE-~Gt~~eLl~ 1461 (1622)
T PLN03130 1393 SKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID-CDRILVLDAGRVVE-FDTPENLLS 1461 (1622)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHh-CCEEEEEECCEEEE-eCCHHHHHh
Confidence 9999999999999999999999999875 5799999999999965 99999999999986 688888764
No 32
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.3e-59 Score=567.67 Aligned_cols=201 Identities=21% Similarity=0.264 Sum_probs=170.7
Q ss_pred eEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 366 VLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
-|+++||+|+|+++ .++|+|+||+|++||++||||++|||||||+++|.|+++|++|+|..++. .+++
T Consensus 1284 ~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~ 1363 (1522)
T TIGR00957 1284 RVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKIT 1363 (1522)
T ss_pred cEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCe
Confidence 59999999999754 47999999999999999999999999999999999999999999998763 3588
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccC----------CCCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVM----------PMKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~----------~~~~LSgGqkqrv~lAral~~~ 503 (582)
+++|++. -+.-|+.+++.. +...+.+++.++++..++.+..... ....||||||||++|||||+++
T Consensus 1364 iVpQdp~---LF~gTIr~NLdp-~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1439 (1522)
T TIGR00957 1364 IIPQDPV---LFSGSLRMNLDP-FSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRK 1439 (1522)
T ss_pred EECCCCc---ccCccHHHHcCc-ccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcC
Confidence 9999863 245688888742 2234566788888888775432211 2357999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|+||||||||++||.++...+.+.|++. ++|||+|+|+++.+. .||+|+||++|+|++ .|+++++.+
T Consensus 1440 ~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~-~~DrIlVld~G~IvE-~G~~~eLl~ 1508 (1522)
T TIGR00957 1440 TKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIM-DYTRVIVLDKGEVAE-FGAPSNLLQ 1508 (1522)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-hCCEEEEEECCEEEE-ECCHHHHHh
Confidence 9999999999999999999999999875 579999999999996 589999999999987 789988865
No 33
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.2e-57 Score=550.56 Aligned_cols=201 Identities=21% Similarity=0.288 Sum_probs=171.9
Q ss_pred eEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 366 VLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
-|+++||+|+|+++ +++|+||||+|++||++||||++|||||||+++|.|+++|++|+|..++. ..++
T Consensus 1308 ~I~f~nVsf~Y~~~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~ 1387 (1560)
T PTZ00243 1308 SLVFEGVQMRYREGLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFS 1387 (1560)
T ss_pred eEEEEEEEEEeCCCCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcce
Confidence 49999999999754 45999999999999999999999999999999999999999999988763 3589
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~~ 503 (582)
+++|++. -++-|+.+++.. +...+.+++.++++..|+.+.....| ...||||||||++|||||+++
T Consensus 1388 iVpQdp~---LF~gTIreNIdp-~~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~ 1463 (1560)
T PTZ00243 1388 MIPQDPV---LFDGTVRQNVDP-FLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKK 1463 (1560)
T ss_pred EECCCCc---cccccHHHHhCc-ccCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcC
Confidence 9999863 245688888743 22345678999999988865432221 257999999999999999995
Q ss_pred -CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 -PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 -p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|+||||||||++||+++...+.+.|++. +.|||+|+|+++.+. .||+|+||++|+|++ .|+++++.+
T Consensus 1464 ~~~ILlLDEATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~-~~DrIlVLd~G~VvE-~Gt~~eLl~ 1533 (1560)
T PTZ00243 1464 GSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVA-QYDKIIVMDHGAVAE-MGSPRELVM 1533 (1560)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHH-hCCEEEEEECCEEEE-ECCHHHHHh
Confidence 8999999999999999999999999875 579999999999985 599999999999986 789888864
No 34
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.3e-55 Score=534.83 Aligned_cols=200 Identities=23% Similarity=0.328 Sum_probs=169.7
Q ss_pred eEEEEEEEEEecC-CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 366 VLQFVEVTFGYTP-DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~-~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
-|+++||+|+|++ .+++|+|+||+|++|+++||+|+||||||||+++|.|+++ .+|+|..++. .+++
T Consensus 1217 ~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is 1295 (1490)
T TIGR01271 1217 QMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFG 1295 (1490)
T ss_pred eEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceE
Confidence 5999999999974 3679999999999999999999999999999999999996 7999987762 3589
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~~ 503 (582)
+++|++. -+.-|+.+++.. +.....+++.++|+.+++.+.....| ...||||||||++|||||+++
T Consensus 1296 ~IpQdp~---LF~GTIR~NLdp-~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~ 1371 (1490)
T TIGR01271 1296 VIPQKVF---IFSGTFRKNLDP-YEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSK 1371 (1490)
T ss_pred EEeCCCc---cCccCHHHHhCc-ccCCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCC
Confidence 9999863 345688888732 22335678899999988854433222 237999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|+||||||||++||.++...|.+.|++. ++|||+|||+++.+. .||+|++|++|+|++ .|++.++.+
T Consensus 1372 ~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~-~~DrIlvL~~G~ivE-~g~p~~Ll~ 1440 (1490)
T TIGR01271 1372 AKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALL-ECQQFLVIEGSSVKQ-YDSIQKLLN 1440 (1490)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-hCCEEEEEECCEEEE-eCCHHHHHc
Confidence 9999999999999999999999999875 579999999999986 499999999999987 678887764
No 35
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.3e-55 Score=530.83 Aligned_cols=198 Identities=20% Similarity=0.265 Sum_probs=163.9
Q ss_pred eEEEEEEEEEec---CCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC---CCCcEEEEcCc-------eeE
Q 007982 366 VLQFVEVTFGYT---PDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV---PLDGMVRRHNH-------LRI 432 (582)
Q Consensus 366 ~l~~~~l~~~y~---~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~---p~~G~i~~~~~-------~~~ 432 (582)
+++++||++.|+ +.+.+|+|||+.|++|+++||+|||||||||||++|+|+.+ |++|+|..++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~~~~~~i 838 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDSSFQRSI 838 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECChhhhcce
Confidence 579999999985 23579999999999999999999999999999999999997 78899988763 247
Q ss_pred EEechhhhhhcCCcccHHHHHHhc----CCC--C---hHHHHHHHHHhcCCCCccccCCCC----CCChhHHHHHHHHHH
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE----YPG--N---EEEKMRAAIGRFGLTGKAQVMPMK----NLSDGQRSRVVFAWL 499 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~----~~~--~---~~~~~~~~l~~~gl~~~~~~~~~~----~LSgGqkqrv~lAra 499 (582)
+|++|+.. +....|+.+++... .+. . ..++++++++.+|+.+..+ ..++ .|||||||||+||++
T Consensus 839 ~yv~Q~~~--~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d-~~v~~~~~~LSgGqrqRl~Ia~a 915 (1394)
T TIGR00956 839 GYVQQQDL--HLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYAD-AVVGVPGEGLNVEQRKRLTIGVE 915 (1394)
T ss_pred eeeccccc--CCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCC-CeeCCCCCCCCHHHhhHHHHHHH
Confidence 89998742 34567888776521 111 1 1345789999999976543 4444 799999999999999
Q ss_pred HccCCC-EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHH-HHhhcCEEEEEeCC-eEEEEcCCH
Q 007982 500 AYRQPH-MLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRL-INQVAHEIWVCENQ-AVTRWEGDI 567 (582)
Q Consensus 500 l~~~p~-lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~-~~~~~d~i~~l~~G-~i~~~~g~~ 567 (582)
|+.+|+ ||+|||||+|||+.+...+.+.|+++ +.|||++||+++. +.+.||++++|++| +++ +.|+.
T Consensus 916 L~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv-~~G~~ 988 (1394)
T TIGR00956 916 LVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTV-YFGDL 988 (1394)
T ss_pred HHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEE-EECCc
Confidence 999997 99999999999999999999998875 5799999999986 45789999999987 886 67776
No 36
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.8e-54 Score=517.53 Aligned_cols=198 Identities=19% Similarity=0.247 Sum_probs=161.9
Q ss_pred eEEEEEEEEEec------------CCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC--CCcEEEEcCc--
Q 007982 366 VLQFVEVTFGYT------------PDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP--LDGMVRRHNH-- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~------------~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p--~~G~i~~~~~-- 429 (582)
.+.++||++..+ +.+.+|+|+|+.|++|+++||+|||||||||||++|+|...+ .+|+|..++.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 488999998863 123699999999999999999999999999999999999763 7899987652
Q ss_pred ------eeEEEechhhhhhcCCcccHHHHHHhc----CCC-C----hHHHHHHHHHhcCCCCccccCCC-----CCCChh
Q 007982 430 ------LRIAQFHQHLAEKLDMDMSALQYMIKE----YPG-N----EEEKMRAAIGRFGLTGKAQVMPM-----KNLSDG 489 (582)
Q Consensus 430 ------~~~~~~~q~~~~~~~~~~~~~~~~~~~----~~~-~----~~~~~~~~l~~~gl~~~~~~~~~-----~~LSgG 489 (582)
..++|++|... +....|+.+++... .+. . ..+.+.++++.+||.+... ..+ ..||||
T Consensus 947 ~~~~~~~~igyv~Q~d~--~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~-~~vg~~~~~~LSgG 1023 (1470)
T PLN03140 947 KQETFARISGYCEQNDI--HSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKD-AIVGLPGVTGLSTE 1023 (1470)
T ss_pred ChHHhhhheEEEccccc--cCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhC-CccCCCCCCCcCHH
Confidence 23789998743 44567888776421 121 1 1235788999999976543 333 589999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHH-HHHhhcCEEEEEeC-CeEEEEc
Q 007982 490 QRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFR-LINQVAHEIWVCEN-QAVTRWE 564 (582)
Q Consensus 490 qkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~ 564 (582)
|||||+||++|+.+|+||+|||||+|||+.+...+.+.|+++ +.|||+++|+++ .+.++||++++|++ |+++ +.
T Consensus 1024 erkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v-~~ 1102 (1470)
T PLN03140 1024 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVI-YS 1102 (1470)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEE-EE
Confidence 999999999999999999999999999999999999998875 679999999998 47789999999996 8886 67
Q ss_pred CCH
Q 007982 565 GDI 567 (582)
Q Consensus 565 g~~ 567 (582)
|+.
T Consensus 1103 G~~ 1105 (1470)
T PLN03140 1103 GPL 1105 (1470)
T ss_pred CCc
Confidence 875
No 37
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.4e-50 Score=412.91 Aligned_cols=426 Identities=21% Similarity=0.305 Sum_probs=286.2
Q ss_pred eeEEEECCeeeeEeeeEE-EeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHH--HHHHH---hc
Q 007982 77 SLSVTFHGHDLIVDSELE-LNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLE--KEAEI---LG 150 (582)
Q Consensus 77 nls~~y~~~~il~~vsl~-i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~---~~ 150 (582)
++..+|+.. -|+=-.+- ..+|.++||+|+||-||||-+|+|+|...|..+.....-.|+..-..++ ....+ +.
T Consensus 79 e~vHRYg~N-gFkL~~LP~pr~G~V~GilG~NGiGKsTalkILaGel~PNLG~~~~pp~wdeVi~~FrGtELq~YF~~l~ 157 (591)
T COG1245 79 EVVHRYGVN-GFKLYRLPTPRPGKVVGILGPNGIGKSTALKILAGELKPNLGRYEDPPSWDEVIKRFRGTELQNYFKKLY 157 (591)
T ss_pred cceeeccCC-ceEEecCCCCCCCcEEEEEcCCCccHHHHHHHHhCccccCCCCCCCCCCHHHHHHHhhhhHHHHHHHHHH
Confidence 346677521 12222232 3479999999999999999999999988887665544333333211111 01111 10
Q ss_pred cccC--CCcchHHHHHH-HHHc-----CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 151 AQED--GGGEQLERVYE-RLEA-----LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 151 ~~~~--~~~~~~~~~~~-~l~~-----~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
.... ..-.++-+... .+.+ +.......+..++.+.++|.. ..++.+++|||||-||+|||.|++++.++.+
T Consensus 158 ~g~~r~v~K~QYVd~iPk~~KG~v~elLk~~de~g~~devve~l~L~n-vl~r~v~~LSGGELQr~aIaa~l~rdADvY~ 236 (591)
T COG1245 158 EGELRAVHKPQYVDLIPKVVKGKVGELLKKVDERGKFDEVVERLGLEN-VLDRDVSELSGGELQRVAIAAALLRDADVYF 236 (591)
T ss_pred cCCcceecchHHHHHHHHHhcchHHHHHHhhhhcCcHHHHHHHhcchh-hhhhhhhhcCchHHHHHHHHHHHhccCCEEE
Confidence 0000 00111111111 1100 011111235788899999974 6799999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHhHHHHHHHHHHHH
Q 007982 223 LDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQTRSELEENQMKQY 299 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~ 299 (582)
+|||||.||...+-.....++++ +++||+|.||+..++-++|-|-++-.-.= .| |-.+.-...+
T Consensus 237 FDEpsSyLDi~qRl~~ar~Irel~~~~k~ViVVEHDLavLD~lsD~vhI~YG~pg-~Y-Gvvs~p~svr----------- 303 (591)
T COG1245 237 FDEPSSYLDIRQRLNAARVIRELAEDGKYVIVVEHDLAVLDYLSDFVHILYGEPG-VY-GVVSKPKSVR----------- 303 (591)
T ss_pred EcCCcccccHHHHHHHHHHHHHHhccCCeEEEEechHHHHHHhhheeEEEecCCc-cc-eEeccchHHH-----------
Confidence 99999999999998888877766 57999999999999999998887753110 11 1100000000
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHHcCCCCccc--ccCceeEEEeccCCC-CC-CCeEEEEEEEEE
Q 007982 300 KWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKV--VKDKVLVFRFVDVGK-LP-PPVLQFVEVTFG 375 (582)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~-~~~l~~~~l~~~ 375 (582)
..+..|+.-+- .+.. .+...+.|...++.. .. ..+++..++++.
T Consensus 304 -------~gIN~yL~Gyl-------------------------~~EN~R~R~~~I~F~~~~~~~~~~~~~lv~y~~~~k~ 351 (591)
T COG1245 304 -------VGINEYLKGYL-------------------------PEENVRFRPEEIEFEEKPPRDDKARDTLVEYPDLKKT 351 (591)
T ss_pred -------HHHHHHHhccC-------------------------chhcccccccceeeeccCcccccccceeeecchheee
Confidence 11122221111 0000 011123333322221 11 445666677777
Q ss_pred ecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCcccHHHHHHh
Q 007982 376 YTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMDMSALQYMIK 455 (582)
Q Consensus 376 y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~ 455 (582)
|++ . .|+-=.=+|..||+++++||||-||||++++|+|.++|++|. ....+++|-+|.+.. .++.|+.+++..
T Consensus 352 ~g~-F-~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~---~~~~~vSyKPQyI~~--~~~gtV~~~l~~ 424 (591)
T COG1245 352 YGD-F-KLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS---EEDLKVSYKPQYISP--DYDGTVEDLLRS 424 (591)
T ss_pred cCc-e-EEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC---CccceEeecceeecC--CCCCcHHHHHHH
Confidence 642 1 122222246677899999999999999999999999999998 445678999998753 466788877765
Q ss_pred cCCC--ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--
Q 007982 456 EYPG--NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW-- 531 (582)
Q Consensus 456 ~~~~--~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~-- 531 (582)
..+. .+.-...++++-+.|.... .+++..|||||.|||+||.+|.++++|.|||||+++||.+.+-.+.+.|+++
T Consensus 425 ~~~~~~~~s~~~~ei~~pl~l~~i~-e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakvIRR~~e 503 (591)
T COG1245 425 AIRSAFGSSYFKTEIVKPLNLEDLL-ERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKVIRRFIE 503 (591)
T ss_pred hhhhhcccchhHHhhcCccchHHHH-hcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHHHHHHHh
Confidence 4322 1222345778889997654 5788999999999999999999999999999999999999998888888775
Q ss_pred --CceEEEEecCHHHHHhhcCEEEEEeC
Q 007982 532 --DGGLVLVSHDFRLINQVAHEIWVCEN 557 (582)
Q Consensus 532 --~~tvi~vsHd~~~~~~~~d~i~~l~~ 557 (582)
+.|.++|-||+-++.-++||++|+++
T Consensus 504 ~~~kta~vVdHDi~~~dyvsDr~ivF~G 531 (591)
T COG1245 504 NNEKTALVVDHDIYMIDYVSDRLIVFEG 531 (591)
T ss_pred hcCceEEEEecceehhhhhhceEEEEec
Confidence 57999999999999999999999863
No 38
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-49 Score=460.01 Aligned_cols=201 Identities=21% Similarity=0.363 Sum_probs=166.1
Q ss_pred eEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 366 VLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
-|+++|++.+|.++ +.+|+||||+|++||.+||||..|||||||+.+|.++..|.+|+|..++. .+++
T Consensus 1138 ~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrls 1217 (1381)
T KOG0054|consen 1138 EIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLS 1217 (1381)
T ss_pred eEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCe
Confidence 59999999999765 67999999999999999999999999999999999999999999998763 3577
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~~ 503 (582)
.+||++. -++-|+..++ +.+....++++.++|+..+|.+.....| ..++|-||||.|+|||||+++
T Consensus 1218 IIPQdPv---LFsGTvR~NL-DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~ 1293 (1381)
T KOG0054|consen 1218 IIPQDPV---LFSGTVRFNL-DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRK 1293 (1381)
T ss_pred eeCCCCc---eecCcccccc-CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhcc
Confidence 8888863 1333443332 1122334667888888877754333222 368999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
.+||+|||+|+++|+++-..|.+.|++. ++|||.|.|.++.+.. ||||+||++|+|++| |+|.+++.
T Consensus 1294 skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd-~DrVlVld~G~v~Ef-dsP~~Ll~ 1362 (1381)
T KOG0054|consen 1294 SKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMD-SDRVLVLDAGRVVEF-DSPAELLS 1362 (1381)
T ss_pred CCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhh-cCeEEEeeCCeEeec-CChHHHHh
Confidence 9999999999999999999999999874 6899999999999965 999999999999985 56666653
No 39
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-50 Score=380.28 Aligned_cols=204 Identities=24% Similarity=0.432 Sum_probs=181.3
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~ 432 (582)
++|+++|++++|+ +..+|+||||+|.+||+++|+||||||||||||+|.||..|++|+|..++. .++
T Consensus 1 ~mi~i~~l~K~fg-~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 1 MMIEIKNLSKSFG-DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred CeEEEEeeeEEeC-CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 4799999999996 468999999999999999999999999999999999999999999998772 247
Q ss_pred EEechhhhhhcCCcccHHHHHHhc------CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE------YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
|+++|++. +.+.+|+++++... .++ ..++.+.++|+++||.+..+.+| .+|||||||||+|||||+++|+
T Consensus 80 GmVFQ~fn--LFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-~qLSGGQqQRVAIARALaM~P~ 156 (240)
T COG1126 80 GMVFQQFN--LFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-AQLSGGQQQRVAIARALAMDPK 156 (240)
T ss_pred Ceeccccc--ccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-cccCcHHHHHHHHHHHHcCCCC
Confidence 89999974 77889999998643 121 13456889999999998777666 7999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
++|+|||||+|||+...++.+.++++ |.|+|+|||++.|+.++||||++|++|+|++ +|+++++..+
T Consensus 157 vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie-~g~p~~~f~~ 226 (240)
T COG1126 157 VMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIE-EGPPEEFFDN 226 (240)
T ss_pred EEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEE-ecCHHHHhcC
Confidence 99999999999999999999888775 6799999999999999999999999999976 7799888764
No 40
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-49 Score=368.70 Aligned_cols=210 Identities=27% Similarity=0.419 Sum_probs=173.7
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHH----HHHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEER----LKLEKEAE 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~ 147 (582)
+|+++||+|+||+..+|++||++|++||+++|+||||||||||||||+++..++.|.+. +++.. ..+.....
T Consensus 2 mi~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~----i~g~~~~~~~~~~~~R~ 77 (240)
T COG1126 2 MIEIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSIT----VDGEDVGDKKDILKLRR 77 (240)
T ss_pred eEEEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEE----ECCEeccchhhHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999876542 22211 02233333
Q ss_pred Hhcc--ccC---CCcchHHHHHHHH---HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCC
Q 007982 148 ILGA--QED---GGGEQLERVYERL---EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPT 219 (582)
Q Consensus 148 ~~~~--~~~---~~~~~~~~~~~~l---~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~ 219 (582)
.++. |.. +..+.++++.... ...+..++++++.++|+++||.+ ..+.+|.+|||||||||||||||+.+|+
T Consensus 78 ~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~-ka~~yP~qLSGGQqQRVAIARALaM~P~ 156 (240)
T COG1126 78 KVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLAD-KADAYPAQLSGGQQQRVAIARALAMDPK 156 (240)
T ss_pred hcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchh-hhhhCccccCcHHHHHHHHHHHHcCCCC
Confidence 3332 221 2234455554322 35678889999999999999986 4689999999999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHh
Q 007982 220 ILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQT 287 (582)
Q Consensus 220 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 287 (582)
++|+|||||+|||+...++++.++++ +.|.|+|||++.|+.++||||++|++|+++. .|++++++.+
T Consensus 157 vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie-~g~p~~~f~~ 226 (240)
T COG1126 157 VMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIE-EGPPEEFFDN 226 (240)
T ss_pred EEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEE-ecCHHHHhcC
Confidence 99999999999999999999988765 7899999999999999999999999998875 4688887753
No 41
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-47 Score=375.95 Aligned_cols=206 Identities=26% Similarity=0.430 Sum_probs=180.6
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------eeEEEe
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------LRIAQF 435 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------~~~~~~ 435 (582)
.++|+++|+++.|.+. ++|+||||+|.+|++++|+||||||||||+|+|+|+++|.+|+|...+. .++||+
T Consensus 2 ~~~i~v~nl~v~y~~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYV 80 (254)
T COG1121 2 MPMIEVENLTVSYGNR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYV 80 (254)
T ss_pred CcEEEEeeeEEEECCE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEc
Confidence 3679999999999754 7999999999999999999999999999999999999999999986543 479999
Q ss_pred chhhhhhcCCcccHHHHHHhc-C---------CCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 436 HQHLAEKLDMDMSALQYMIKE-Y---------PGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
||.......+..|+.+.+... + ...+.+.+.++|+++|+.+.. ++++++|||||+|||.|||||+++|+
T Consensus 81 PQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-~r~i~~LSGGQ~QRV~lARAL~~~p~ 159 (254)
T COG1121 81 PQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-DRQIGELSGGQKQRVLLARALAQNPD 159 (254)
T ss_pred CcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-CCcccccCcHHHHHHHHHHHhccCCC
Confidence 998765667788999987643 1 112457899999999999765 57899999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
||||||||+|+|+.+...+.++|+++ ++|||+||||+..+.++||+|+.|+ ++++ ..|+++++...
T Consensus 160 lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~-~~G~~~~~~~~ 228 (254)
T COG1121 160 LLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLI-ASGPPEEVLTE 228 (254)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeE-eccChhhccCH
Confidence 99999999999999999999998775 6799999999999999999999995 5554 48898888664
No 42
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.1e-46 Score=370.67 Aligned_cols=202 Identities=30% Similarity=0.484 Sum_probs=176.3
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
++|+++|++|+|+ ++++++|+||+|.+|++++|+||||||||||||+|+|+++|.+|+|...+. ..++
T Consensus 1 ~~L~~~~ls~~y~-~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 1 MMLEVENLSFGYG-GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred CeeEEEEEEEEEC-CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 3689999999997 578999999999999999999999999999999999999999999998763 3689
Q ss_pred EechhhhhhcCCcccHHHHHHhc-CC---------CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKE-YP---------GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~ 503 (582)
|++|... .....++.+.+... +| ..+.+.+.++|+.+|+.+... +++.+|||||||||.|||||+++
T Consensus 80 ~vpQ~~~--~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~-r~~~~LSGGerQrv~iArALaQ~ 156 (258)
T COG1120 80 YVPQSPS--APFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLAD-RPVDELSGGERQRVLIARALAQE 156 (258)
T ss_pred EeccCCC--CCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhc-CcccccChhHHHHHHHHHHHhcC
Confidence 9999863 44566777765432 11 123456889999999987664 67999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|++|||||||++||+....++++.++++ +.|||+|+||++++.++||++++|++|+++ ..|++.+..
T Consensus 157 ~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~-a~G~p~evl 227 (258)
T COG1120 157 TPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIV-AQGTPEEVL 227 (258)
T ss_pred CCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEE-eecCcchhc
Confidence 9999999999999999999999998876 479999999999999999999999999997 588887664
No 43
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-46 Score=355.45 Aligned_cols=207 Identities=22% Similarity=0.346 Sum_probs=179.5
Q ss_pred CeEEEEEEEEEecCCc---eeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------
Q 007982 365 PVLQFVEVTFGYTPDN---LIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------ 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~---~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------ 429 (582)
++|+++|+++.|+... +++++|||+|.+||++||+|+||||||||+++|+|+.+|++|+|.+++.
T Consensus 2 ~~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~ 81 (252)
T COG1124 2 TLLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFY 81 (252)
T ss_pred ceEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhc
Confidence 5799999999997643 4999999999999999999999999999999999999999999998772
Q ss_pred eeEEEechhhhhhcCCcccHHHHHHhcCC----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 430 LRIAQFHQHLAEKLDMDMSALQYMIKEYP----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 430 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
..+.+++|++...+++..++.+.+..... ....+++.++|+.+||.....++.+.+|||||+|||+|||||+.+|+
T Consensus 82 ~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~~~Pk 161 (252)
T COG1124 82 RPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALIPEPK 161 (252)
T ss_pred cceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhccCCC
Confidence 34778999998888888888777654322 12345699999999998765555568999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNE----WDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|||||||++||+.....+.+++.+ ++-|+|+||||+..+..+||||+||++|++++ .++..+++.
T Consensus 162 lLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE-~~~~~~l~~ 231 (252)
T COG1124 162 LLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVE-IGPTEELLS 231 (252)
T ss_pred EEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEE-eechhhhhc
Confidence 9999999999999999998888765 46799999999999999999999999999986 556555543
No 44
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.4e-44 Score=414.46 Aligned_cols=336 Identities=21% Similarity=0.240 Sum_probs=234.0
Q ss_pred HHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC--CceeecCCCCCCCHHHHHHHHHHHhhc---CcEE
Q 007982 175 AEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP--TILLLDEPTNHLDLEACVWLEETLKKF---DRIL 249 (582)
Q Consensus 175 ~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P--~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tv 249 (582)
+..++. +|+.+||.....++++.+|||||+|||+||+||+.+| ++|||||||++||+..+..|.++|+++ +.||
T Consensus 466 i~~rl~-~L~~vGL~~l~l~r~~~~LSgGE~QRv~LA~aL~~~~~~~llILDEPtagLd~~~~~~L~~~L~~L~~~G~TV 544 (943)
T PRK00349 466 IRERLK-FLVDVGLDYLTLSRSAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNDRLIETLKHLRDLGNTL 544 (943)
T ss_pred HHHHHH-HhhccccCCCCCCCchhhCCHHHHHHHHHHHHHhhCCCCcEEEecCCccCCCHHHHHHHHHHHHHHHhCCCEE
Confidence 344553 7889999643268999999999999999999999997 999999999999999999999998765 6799
Q ss_pred EEEecCHHHHHhhcCeEEEE------eCCeEEEEcCChhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhH
Q 007982 250 VVISHSQDFLNGVCTNIIHM------QNKQLKFYTGNFDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKL 323 (582)
Q Consensus 250 iivsHd~~~~~~~~d~i~~l------~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (582)
|+||||++++. .||+|++| ++|+++ +.|+++++........ ..+-.
T Consensus 545 IvVeH~~~~i~-~aD~vi~LgpgaG~~~G~iv-~~g~~~e~~~~~~~l~---------------------~~~l~----- 596 (943)
T PRK00349 545 IVVEHDEDTIR-AADYIVDIGPGAGVHGGEVV-ASGTPEEIMKNPNSLT---------------------GQYLS----- 596 (943)
T ss_pred EEEeCCHHHHH-hCCEEEEeccccCCCCCEEe-eccCHHHHhcChhhee---------------------ehhhc-----
Confidence 99999999986 69999999 889986 5677766532110000 00000
Q ss_pred HHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCC
Q 007982 324 ARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNG 403 (582)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NG 403 (582)
...... . +.. . .....+.|++++++. ..|+|+||+|+.|++++|+|+||
T Consensus 597 ---------------~~~~~~-~-~~~------~--~~~~~~~L~v~~l~~------~~L~~isl~Ip~GeivgVtGvsG 645 (943)
T PRK00349 597 ---------------GKKKIE-V-PKE------R--RKGNGKFLKLKGARE------NNLKNVDVEIPLGKFTCVTGVSG 645 (943)
T ss_pred ---------------cccccc-c-ccc------c--cCCCcceEEecCCcc------CCcCceEEEEeCCCEEEEEcCCC
Confidence 000000 0 000 0 001235788988862 24899999999999999999999
Q ss_pred CcHHHHHHHHh---------CCCCC----------------------------CCcEEEEcCc--------------eeE
Q 007982 404 AGKSTLLKLMT---------GDLVP----------------------------LDGMVRRHNH--------------LRI 432 (582)
Q Consensus 404 sGKSTLl~ll~---------Gl~~p----------------------------~~G~i~~~~~--------------~~~ 432 (582)
||||||++-+. +...+ .++-.++.+. ...
T Consensus 646 SGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~ 725 (943)
T PRK00349 646 SGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKVIDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKAR 725 (943)
T ss_pred CCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCceEEEecCCCCCCCCCCceeeccccHHHHHHhccCcccccc
Confidence 99999998763 11111 1110000000 000
Q ss_pred EEechhhhhhc----------------------------------------------------CCcccHHHHHHhcCCCC
Q 007982 433 AQFHQHLAEKL----------------------------------------------------DMDMSALQYMIKEYPGN 460 (582)
Q Consensus 433 ~~~~q~~~~~~----------------------------------------------------~~~~~~~~~~~~~~~~~ 460 (582)
+|.+++++.+. ...+++.+.+.......
T Consensus 726 g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~ 805 (943)
T PRK00349 726 GYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDVCKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIP 805 (943)
T ss_pred CCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCccccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhch
Confidence 11111111000 00122222221110001
Q ss_pred hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCC---CEEEEeCCCCCCCHHHHHHHHHHHHhc---Cce
Q 007982 461 EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQP---HMLLLDEPTNHLDIETIDSLAEALNEW---DGG 534 (582)
Q Consensus 461 ~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p---~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~t 534 (582)
......+.|..+||......+++.+|||||+|||.||++|+.+| +++||||||+|||+..+..+.+.|+++ +.|
T Consensus 806 ~i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~T 885 (943)
T PRK00349 806 KIARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNT 885 (943)
T ss_pred hhhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCE
Confidence 12334677889999764345677899999999999999999999 999999999999999999999988775 579
Q ss_pred EEEEecCHHHHHhhcCEEEEE------eCCeEEEEcCCHHHHHH
Q 007982 535 LVLVSHDFRLINQVAHEIWVC------ENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 535 vi~vsHd~~~~~~~~d~i~~l------~~G~i~~~~g~~~~~~~ 572 (582)
||+||||++++. .||+|++| ++|+|+ +.|+++++..
T Consensus 886 VIiitH~~~~i~-~aD~ii~Lgp~~G~~~G~Iv-~~Gt~~el~~ 927 (943)
T PRK00349 886 VVVIEHNLDVIK-TADWIIDLGPEGGDGGGEIV-ATGTPEEVAK 927 (943)
T ss_pred EEEEecCHHHHH-hCCEEEEecCCcCCCCCEEE-EeCCHHHHHh
Confidence 999999999985 79999999 689996 5899888764
No 45
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-45 Score=351.01 Aligned_cols=206 Identities=24% Similarity=0.384 Sum_probs=181.5
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------e
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------------L 430 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------------~ 430 (582)
++|+++||++.|++++.+|+||||+|++||+++|+||||||||||||+|.|+..|++|+|...+. .
T Consensus 2 ~~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 2 MMIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred ceEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 57999999999987889999999999999999999999999999999999999999999987652 3
Q ss_pred eEEEechhhhhhcCCcccHHHHHHhc--------------CCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHH
Q 007982 431 RIAQFHQHLAEKLDMDMSALQYMIKE--------------YPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 431 ~~~~~~q~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~l 496 (582)
.+|+++|.+. +....++++++... +++.+...+.++|+++|+.+... .+.++|||||||||+|
T Consensus 82 ~iGmIfQ~~n--Lv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~-qra~~LSGGQQQRVaI 158 (258)
T COG3638 82 DIGMIFQQFN--LVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAY-QRASTLSGGQQQRVAI 158 (258)
T ss_pred hceeEeccCC--cccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHH-HHhccCCcchhHHHHH
Confidence 5899999874 55667777776421 23445667889999999987665 4568999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||+++|+|+|.|||++.|||.+...+++.|++. +.|||+..|+++++.++||||+-|++|+|+ |+|++.++-+
T Consensus 159 ARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~iv-fDg~~~el~~ 237 (258)
T COG3638 159 ARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIV-FDGPASELTD 237 (258)
T ss_pred HHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEE-EeCChhhhhH
Confidence 99999999999999999999999999999998764 689999999999999999999999999996 8999988765
Q ss_pred HH
Q 007982 573 HL 574 (582)
Q Consensus 573 ~~ 574 (582)
..
T Consensus 238 ~~ 239 (258)
T COG3638 238 EA 239 (258)
T ss_pred HH
Confidence 43
No 46
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-45 Score=354.87 Aligned_cols=190 Identities=29% Similarity=0.393 Sum_probs=167.9
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------eeEEEechh
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------LRIAQFHQH 438 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------~~~~~~~q~ 438 (582)
.++.++++++.|++ ..+|+|+||+|.+||+++|+||||||||||||+|+|+.+|++|+|...+. ..++|++|+
T Consensus 2 ~~l~i~~v~~~f~~-~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ~ 80 (248)
T COG1116 2 ALLEIEGVSKSFGG-VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQE 80 (248)
T ss_pred ceEEEEeeEEEeCc-eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEecc
Confidence 46899999999975 78999999999999999999999999999999999999999999988663 368999999
Q ss_pred hhhhcCCcccHHHHHHhcC-----CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCC
Q 007982 439 LAEKLDMDMSALQYMIKEY-----PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEP 512 (582)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 512 (582)
.. +.+..|+.+|+.... +. ...+++.++|+.+||.++....| .+|||||||||+|||||+.+|+|||||||
T Consensus 81 ~~--LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-~qLSGGMrQRVaiARAL~~~P~lLLlDEP 157 (248)
T COG1116 81 DA--LLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-HQLSGGMRQRVAIARALATRPKLLLLDEP 157 (248)
T ss_pred Cc--ccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-cccChHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 65 678889999875332 11 13457899999999999877665 89999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhcCEEEEEeCC
Q 007982 513 TNHLDIETIDSLAEALNE----WDGGLVLVSHDFRLINQVAHEIWVCENQ 558 (582)
Q Consensus 513 t~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~~~~~~d~i~~l~~G 558 (582)
+++||..++..+.+.+.+ .+.|||+||||++++..++|||++|.++
T Consensus 158 FgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 158 FGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred cchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999888776654 4789999999999999999999999984
No 47
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-45 Score=363.82 Aligned_cols=205 Identities=24% Similarity=0.382 Sum_probs=178.9
Q ss_pred eEEEEEEEEEecCC----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------
Q 007982 366 VLQFVEVTFGYTPD----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------ 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------ 429 (582)
||++++|++.|... ..+++||||+|++||++||+|.||||||||+|+|.++.+|++|+|..++.
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 58999999999752 46999999999999999999999999999999999999999999988762
Q ss_pred --eeEEEechhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc
Q 007982 430 --LRIAQFHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 430 --~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
.++|+++|+|. +.-..|+++++... .++. ..+++.++|+.+||++.....| .+|||||||||+|||||+
T Consensus 81 ~R~~IGMIFQhFn--LLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-~qLSGGQKQRVaIARALa 157 (339)
T COG1135 81 LRQKIGMIFQHFN--LLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-AQLSGGQKQRVAIARALA 157 (339)
T ss_pred HHhhccEEecccc--ccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-hhcCcchhhHHHHHHHHh
Confidence 36999999985 44457888877532 2222 3567899999999997776665 799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHH
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNE----WDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHL 574 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~ 574 (582)
.+|+|||+|||||+|||++...+.++|++ ++.|||+|||.|+.+.++||||.||++|++++ .|+..+.+.+-
T Consensus 158 ~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE-~G~v~~vF~~P 233 (339)
T COG1135 158 NNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVE-EGTVSEVFANP 233 (339)
T ss_pred cCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEE-eccHHHhhcCc
Confidence 99999999999999999999999998875 47799999999999999999999999999986 88888886643
No 48
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.5e-45 Score=348.48 Aligned_cols=205 Identities=27% Similarity=0.370 Sum_probs=176.6
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------------- 429 (582)
.++|++++|+++|+ ++.+++||||+|++||+++|+||||||||||||+|.|+++|++|+|...+.
T Consensus 6 ~~~I~vr~v~~~fG-~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 6 EPLIEVRGVTKSFG-DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred cceEEEeeeeeecC-CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 67899999999996 578999999999999999999999999999999999999999999988763
Q ss_pred eeEEEechhhhhhcCCcccHHHHHHhc---CCCCh----HHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHcc
Q 007982 430 LRIAQFHQHLAEKLDMDMSALQYMIKE---YPGNE----EEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 430 ~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 502 (582)
.++|+++|+-+ +.-++|+++|+... +.+.. ++.+..-|+.+||.+...+.-+++||||+++||+||||++.
T Consensus 85 ~r~GvlFQ~gA--LFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAial 162 (263)
T COG1127 85 KRMGVLFQQGA--LFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIAL 162 (263)
T ss_pred hheeEEeeccc--cccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhc
Confidence 25889999854 55678888887532 22222 23455668999999873334458999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|+||++||||+||||-+...+.++|+++ +.|+|+||||++.+..+||||+++.+|+|. |.|+++++.+
T Consensus 163 dPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~-~~Gt~~el~~ 235 (263)
T COG1127 163 DPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVI-AEGTPEELLA 235 (263)
T ss_pred CCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEE-EeCCHHHHHh
Confidence 99999999999999999988888877654 679999999999999999999999999995 8999999876
No 49
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-45 Score=347.78 Aligned_cols=210 Identities=26% Similarity=0.359 Sum_probs=172.9
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHH------HHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEER------LKLEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~------~~~~~~ 145 (582)
||+++||||+|+++.+++|+||+|++||+++|||||||||||+||+|+++..|+.|.+ .++++. ..++..
T Consensus 1 MI~~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I----~i~g~~i~~~d~~~LRr~ 76 (309)
T COG1125 1 MIEFENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEI----LIDGEDISDLDPVELRRK 76 (309)
T ss_pred CceeeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceE----EECCeecccCCHHHHHHh
Confidence 5899999999999999999999999999999999999999999999999998886643 222221 223333
Q ss_pred HHHhcccc--CCCcchHHHH--HHHHHcCChhHHHHHHHHHHHhCCCCh-hhhhccCCCCChhHHHHHHHHHHHhcCCCc
Q 007982 146 AEILGAQE--DGGGEQLERV--YERLEALDASTAEKRAAEILYGLGFNK-TMQAKKTRDFSGGWRMRIALARALFINPTI 220 (582)
Q Consensus 146 ~~~~~~~~--~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~l~~lgl~~-~~~~~~~~~LSGGqrqRv~LAraL~~~P~l 220 (582)
..++.++. .+..++.+++ ...+..++...+++++.++|+.+||+. .+.+|+|++|||||+|||.+||||+.+|+|
T Consensus 77 IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP~i 156 (309)
T COG1125 77 IGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADPPI 156 (309)
T ss_pred hhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCCCe
Confidence 32222211 1222333333 345667788899999999999999975 588999999999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHhh----cCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 221 LLLDEPTNHLDLEACVWLEETLKK----FDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 221 LlLDEPt~~LD~~~~~~l~~~l~~----~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
||+|||+++|||.++..+.+.+.+ +++||||||||++++..++|||.+|++|+++.| +++++++.
T Consensus 157 lLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~-~~P~~il~ 225 (309)
T COG1125 157 LLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQY-DTPDEILA 225 (309)
T ss_pred EeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEe-CCHHHHHh
Confidence 999999999999999998887754 588999999999999999999999999999876 56766654
No 50
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=8.7e-44 Score=407.24 Aligned_cols=328 Identities=20% Similarity=0.278 Sum_probs=224.7
Q ss_pred HHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC--CceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCH
Q 007982 182 ILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP--TILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQ 256 (582)
Q Consensus 182 ~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P--~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~ 256 (582)
.|..+||.....++++.+|||||+|||+||++|+.+| .+|||||||+|||+..+..|.++|+++ +.|||+|+||+
T Consensus 470 ~L~~vgL~~l~l~r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~~G~TVIvVeHd~ 549 (924)
T TIGR00630 470 FLIDVGLDYLTLSRAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRDLGNTVIVVEHDE 549 (924)
T ss_pred hHhhccccccccCCCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4677888642258899999999999999999999986 899999999999999999999998765 67999999999
Q ss_pred HHHHhhcCeEEEE------eCCeEEEEcCChhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHH
Q 007982 257 DFLNGVCTNIIHM------QNKQLKFYTGNFDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSK 330 (582)
Q Consensus 257 ~~~~~~~d~i~~l------~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (582)
+++. .||+|++| ++|+|+ +.|+++++........ ..+-.
T Consensus 550 ~~i~-~aD~vi~LgpgaG~~~G~Iv-~~g~~~el~~~~~~lt---------------------~~~l~------------ 594 (924)
T TIGR00630 550 ETIR-AADYVIDIGPGAGIHGGEVV-ASGTPEEILANPDSLT---------------------GQYLS------------ 594 (924)
T ss_pred HHHh-hCCEEEEecccccCCCCEEe-eccCHHHHhcCchhee---------------------eeccc------------
Confidence 9986 89999999 899986 4676655421100000 00000
Q ss_pred HHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHH
Q 007982 331 EKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLL 410 (582)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl 410 (582)
....... +.. ......+.|+++|++. ..|+|+||+|+.|++++|+|+||||||||+
T Consensus 595 ---------~~~~~~~-~~~--------~~~~~~~~l~l~~~~~------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl 650 (924)
T TIGR00630 595 ---------GKKKIEV-PKE--------RRPGNGKFLTLKGARE------NNLKNITVSIPLGLFTCITGVSGSGKSTLI 650 (924)
T ss_pred ---------ccccccc-ccc--------ccCCCcceEEEEeCcc------CCcCceEEEEeCCCEEEEECCCCCCHHHHH
Confidence 0000000 000 0001234789999873 258999999999999999999999999999
Q ss_pred HHHh---------C-CCCCC-----Cc------EEEEcC-------ce---------------------------eEEEe
Q 007982 411 KLMT---------G-DLVPL-----DG------MVRRHN-------HL---------------------------RIAQF 435 (582)
Q Consensus 411 ~ll~---------G-l~~p~-----~G------~i~~~~-------~~---------------------------~~~~~ 435 (582)
+-.. + ...|. .| .|.... +. ..+++
T Consensus 651 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~F 730 (924)
T TIGR00630 651 NDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKVIHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRF 730 (924)
T ss_pred HHHHHHHHHHHhcccccCCCCcCccccccCCCceEEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhc
Confidence 8222 1 11110 11 010000 00 00000
Q ss_pred chhhh---------------------h----------------hc-----------CCcccHHHHHHhcCCCChHHHHHH
Q 007982 436 HQHLA---------------------E----------------KL-----------DMDMSALQYMIKEYPGNEEEKMRA 467 (582)
Q Consensus 436 ~q~~~---------------------~----------------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 467 (582)
.-+.. + .+ ...+++.+.+..........+..+
T Consensus 731 SfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~ 810 (924)
T TIGR00630 731 SFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEVCKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQ 810 (924)
T ss_pred CCCCCCCCCCCCccceEEEEEccCCCCcccCCCCcCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHH
Confidence 00000 0 00 001111111110000001123457
Q ss_pred HHHhcCCCCccccCCCCCCChhHHHHHHHHHHHcc---CCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecC
Q 007982 468 AIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYR---QPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHD 541 (582)
Q Consensus 468 ~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~---~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd 541 (582)
+|..+||......+++.+|||||+|||.||++|+. +|+++||||||+|||+..+..+.+.|+++ +.|||+||||
T Consensus 811 ~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~ 890 (924)
T TIGR00630 811 TLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHN 890 (924)
T ss_pred HHHHcCCCchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 78899997543456789999999999999999997 59999999999999999999999998775 5799999999
Q ss_pred HHHHHhhcCEEEEE------eCCeEEEEcCCHHHH
Q 007982 542 FRLINQVAHEIWVC------ENQAVTRWEGDIMDF 570 (582)
Q Consensus 542 ~~~~~~~~d~i~~l------~~G~i~~~~g~~~~~ 570 (582)
++++. .||+|++| ++|+++ +.|+++++
T Consensus 891 ~~~i~-~aD~ii~Lgp~~G~~gG~iv-~~G~~~~l 923 (924)
T TIGR00630 891 LDVIK-TADYIIDLGPEGGDGGGTIV-ASGTPEEV 923 (924)
T ss_pred HHHHH-hCCEEEEecCCccCCCCEEE-EeCCHHHh
Confidence 99985 79999999 799997 58887764
No 51
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-45 Score=350.41 Aligned_cols=203 Identities=23% Similarity=0.334 Sum_probs=176.5
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
||+++||++.|. ++.+++|+||+|..||+++++|||||||||+||+|.+++.|++|+|..++. .++||
T Consensus 1 MI~~~nvsk~y~-~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 1 MIEFENVSKRYG-NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred CceeeeeehhcC-CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 589999999997 578999999999999999999999999999999999999999999998763 46999
Q ss_pred echhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCC--ccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 435 FHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTG--KAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~--~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
+-|... +.+.+|+.+++..- +.+. ..+++.++|..+||+. +..+ .+++|||||||||.+||||+.+|++
T Consensus 80 viQqig--LFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~R-yP~eLSGGQQQRVGv~RALAadP~i 156 (309)
T COG1125 80 VIQQIG--LFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADR-YPHELSGGQQQRVGVARALAADPPI 156 (309)
T ss_pred hhhhcc--cCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhc-CchhcCcchhhHHHHHHHHhcCCCe
Confidence 999864 77888999987532 2221 3467899999999975 3444 4589999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNE----WDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
||+|||+++|||-++..+.+.+.+ ++.|||+||||++++.+++|||++|++|+++. .+++++++.+
T Consensus 157 lLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q-~~~P~~il~~ 226 (309)
T COG1125 157 LLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQ-YDTPDEILAN 226 (309)
T ss_pred EeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEE-eCCHHHHHhC
Confidence 999999999999999988877754 57899999999999999999999999999986 5677776554
No 52
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.6e-43 Score=420.64 Aligned_cols=328 Identities=20% Similarity=0.271 Sum_probs=229.4
Q ss_pred HHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC--CceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCH
Q 007982 182 ILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP--TILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQ 256 (582)
Q Consensus 182 ~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P--~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~ 256 (582)
.|..+||.....++.+.+|||||+|||+||+||+.+| ++|||||||+|||+..+..|.++|+++ +.|||+||||+
T Consensus 459 ~L~~vGL~~L~ldR~~~tLSGGE~QRV~LAraL~~~p~g~lLILDEPTagLD~~~~~~L~~lL~~L~~~G~TVIvVeHd~ 538 (1809)
T PRK00635 459 ILIDLGLPYLTPERALATLSGGEQERTALAKHLGAELIGITYILDEPSIGLHPQDTHKLINVIKKLRDQGNTVLLVEHDE 538 (1809)
T ss_pred HHHhccccCCCCCCchhhCCHHHHHHHHHHHHHhcCCCCcEEEEECCccCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcH
Confidence 3557788643257899999999999999999999999 899999999999999999999988765 67999999999
Q ss_pred HHHHhhcCeEEEEe------CCeEEEEcCChhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHH
Q 007982 257 DFLNGVCTNIIHMQ------NKQLKFYTGNFDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSK 330 (582)
Q Consensus 257 ~~~~~~~d~i~~l~------~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (582)
++ ..+||+|++|. +|+++ +.|+++++........ ..
T Consensus 539 ~v-i~~aDrVi~L~pGag~~gG~Iv-~~G~~~eil~~~~~l~---------------------~~--------------- 580 (1809)
T PRK00635 539 QM-ISLADRIIDIGPGAGIFGGEVL-FNGSPREFLAKSDSLT---------------------AK--------------- 580 (1809)
T ss_pred HH-HHhCCEEEEEcCCcccCCCEEE-EecCHHHHhhChHHHH---------------------HH---------------
Confidence 94 58999999996 67876 5677766542111000 00
Q ss_pred HHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHH
Q 007982 331 EKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLL 410 (582)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl 410 (582)
+......... +. ....+.+.|++++++. ..|+++||+|+.|++++|+|+||||||||+
T Consensus 581 ------~l~~~~~~~~-~~---------~~~~~~~~L~l~~~~~------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl 638 (1809)
T PRK00635 581 ------YLRQELTIPI-PE---------KRTNSLGTLTLSKATK------HNLKDLTISLPLGRLTVVTGVSGSGKSSLI 638 (1809)
T ss_pred ------HhcCcccccC-cc---------cccCCCCeEEEecccc------CCccceEEEEcCCcEEEEEcCCCCCHHHHH
Confidence 0000000000 00 0001234688888862 268999999999999999999999999999
Q ss_pred H---------HHhCCCCCC------------------------CcEEEEcCc--------------eeEE-----Eechh
Q 007982 411 K---------LMTGDLVPL------------------------DGMVRRHNH--------------LRIA-----QFHQH 438 (582)
Q Consensus 411 ~---------ll~Gl~~p~------------------------~G~i~~~~~--------------~~~~-----~~~q~ 438 (582)
+ .|.|...|. ++.+++.+- ...+ +.++.
T Consensus 639 ~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~idQspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~ 718 (1809)
T PRK00635 639 NDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHITRDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNT 718 (1809)
T ss_pred HHHHHHHHHHHhcCCCcccccccccccceeEEecCCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecC
Confidence 9 666654331 111221000 0000 00110
Q ss_pred ---------------h---hh------------------hcCCcccHHHHHHh-------cCC-CC-hHHHHHHHHHhcC
Q 007982 439 ---------------L---AE------------------KLDMDMSALQYMIK-------EYP-GN-EEEKMRAAIGRFG 473 (582)
Q Consensus 439 ---------------~---~~------------------~~~~~~~~~~~~~~-------~~~-~~-~~~~~~~~l~~~g 473 (582)
+ .. ......++.+.+.. .+. .. ..+.+ ++|+.+|
T Consensus 719 ~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vG 797 (1809)
T PRK00635 719 PLGACAECQGLGSITTTDNRTSIPCPSCLGKRFLPQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLG 797 (1809)
T ss_pred CCCCCCcceeeEEEEEecCCceEECCccCCcccCHHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcC
Confidence 0 00 00011223332211 011 11 12334 5788999
Q ss_pred CCCccccCCCCCCChhHHHHHHHHHHHc---cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHh
Q 007982 474 LTGKAQVMPMKNLSDGQRSRVVFAWLAY---RQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQ 547 (582)
Q Consensus 474 l~~~~~~~~~~~LSgGqkqrv~lAral~---~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~ 547 (582)
|......+++.+|||||+|||+||++|+ .+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++ .
T Consensus 798 L~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i-~ 876 (1809)
T PRK00635 798 LDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVV-K 876 (1809)
T ss_pred CcchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-H
Confidence 9764235677899999999999999997 699999999999999999999999988765 57999999999999 8
Q ss_pred hcCEEEEEe------CCeEEEEcCCHHHHHH
Q 007982 548 VAHEIWVCE------NQAVTRWEGDIMDFKL 572 (582)
Q Consensus 548 ~~d~i~~l~------~G~i~~~~g~~~~~~~ 572 (582)
+||+|++|. +|+++ ..|+++++..
T Consensus 877 ~aDrVi~L~p~gg~~~G~iv-~~Gtpeel~~ 906 (1809)
T PRK00635 877 VADYVLELGPEGGNLGGYLL-ASCSPEELIH 906 (1809)
T ss_pred hCCEEEEEccCCCCCCCEEE-EeCCHHHHHh
Confidence 999999996 67886 5899988754
No 53
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-44 Score=354.13 Aligned_cols=209 Identities=30% Similarity=0.433 Sum_probs=172.3
Q ss_pred ceEEeeeEEEECC-----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHH------HH
Q 007982 72 DIRIESLSVTFHG-----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEE------RL 140 (582)
Q Consensus 72 ~i~v~nls~~y~~-----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~------~~ 140 (582)
||++++|+|.|+. ..+++||||+|++||++||||.||||||||+|||+++..|+.|.+ .+++. ..
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v----~v~G~di~~l~~~ 76 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSV----FVDGQDLTALSEA 76 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceE----EEcCEecccCChH
Confidence 5899999999976 479999999999999999999999999999999999999987653 22221 11
Q ss_pred HHHHHHHHhc--cccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHH
Q 007982 141 KLEKEAEILG--AQEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARA 213 (582)
Q Consensus 141 ~~~~~~~~~~--~~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 213 (582)
.+++..+.++ +|... ..++++++...+ ...++.+.++|+.++|+.+||++ ..+++|.+|||||||||+||||
T Consensus 77 ~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~d-k~~~yP~qLSGGQKQRVaIARA 155 (339)
T COG1135 77 ELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSD-KADRYPAQLSGGQKQRVAIARA 155 (339)
T ss_pred HHHHHHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChh-hhccCchhcCcchhhHHHHHHH
Confidence 2333334443 22221 234455655444 46778899999999999999985 6789999999999999999999
Q ss_pred HhcCCCceeecCCCCCCCHHHHHHHHHHHhh----cCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 214 LFINPTILLLDEPTNHLDLEACVWLEETLKK----FDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 214 L~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~----~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
|+.+|+|||+|||||+|||++.+.++++|++ ++.||++|||.|+.+..+|||+.+|++|+++. .|+..+.+.
T Consensus 156 La~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE-~G~v~~vF~ 231 (339)
T COG1135 156 LANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVE-EGTVSEVFA 231 (339)
T ss_pred HhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEE-eccHHHhhc
Confidence 9999999999999999999999999999875 47899999999999999999999999999975 566665543
No 54
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-44 Score=351.24 Aligned_cols=207 Identities=29% Similarity=0.436 Sum_probs=179.5
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~ 432 (582)
+++.+++++|.|+++.++++++||+|.+|++++|+|+||||||||+++|+|+++|++|.|...+. .++
T Consensus 2 ~~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 2 RMIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred ceEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 57899999999976568999999999999999999999999999999999999999999976542 358
Q ss_pred EEechhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
|+++|++..++ +..|+.+.+... .+.. ..+++.++|+.+|+.+... +++..|||||||||+||.+|+++|++
T Consensus 82 G~VfQnpd~q~-~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~-r~p~~LSGGqkqRvaIA~vLa~~P~i 159 (235)
T COG1122 82 GLVFQNPDDQL-FGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLD-RPPFNLSGGQKQRVAIAGVLAMGPEI 159 (235)
T ss_pred EEEEECccccc-ccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhcc-CCccccCCcceeeHHhhHHHHcCCCE
Confidence 99999987665 455666655432 1211 3467889999999998754 56689999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHH
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHL 574 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~ 574 (582)
|||||||++||+.++..+.+.++++ +.|||++|||++++..+|||+|+|++|+++ ++|++.++....
T Consensus 160 liLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~-~~g~p~~i~~~~ 230 (235)
T COG1122 160 LLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKIL-ADGDPAEIFNDA 230 (235)
T ss_pred EEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEe-ecCCHHHHhhhh
Confidence 9999999999999999999999886 359999999999999999999999999996 699988887653
No 55
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7.2e-44 Score=344.25 Aligned_cols=193 Identities=26% Similarity=0.386 Sum_probs=166.7
Q ss_pred eEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------
Q 007982 366 VLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------- 429 (582)
+++++||++.|..+ ..+|+++||+|++||+++|+|||||||||||++|.|+.+|++|.|.+.+.
T Consensus 1 ~i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~ 80 (226)
T COG1136 1 MIELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKL 80 (226)
T ss_pred CcEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHH
Confidence 46799999999643 36899999999999999999999999999999999999999999987652
Q ss_pred --eeEEEechhhhhhcCCcccHHHHHHhc--C---CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc
Q 007982 430 --LRIAQFHQHLAEKLDMDMSALQYMIKE--Y---PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 430 --~~~~~~~q~~~~~~~~~~~~~~~~~~~--~---~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
..+||++|++. +-+..|+.+++.-. + +. ...+.+..+++.+||.+...++++.+|||||||||+|||||+
T Consensus 81 R~~~iGfvFQ~~n--Ll~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~ 158 (226)
T COG1136 81 RRKKIGFVFQNFN--LLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALI 158 (226)
T ss_pred HHHhEEEECccCC--CCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHh
Confidence 25999999864 66788999987521 1 11 234567889999999876665667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEE
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVT 561 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 561 (582)
.+|++||.||||.+||.++...+.+++.++ +.||||||||.+.+ .+|||++.|.+|++.
T Consensus 159 ~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA-~~~dr~i~l~dG~~~ 221 (226)
T COG1136 159 NNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELA-KYADRVIELKDGKIE 221 (226)
T ss_pred cCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHH-HhCCEEEEEeCCeee
Confidence 999999999999999999999999998765 56999999999988 589999999999964
No 56
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-44 Score=343.88 Aligned_cols=201 Identities=28% Similarity=0.428 Sum_probs=162.4
Q ss_pred ceEEeeeEEEECCee----eeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHH-----
Q 007982 72 DIRIESLSVTFHGHD----LIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKL----- 142 (582)
Q Consensus 72 ~i~v~nls~~y~~~~----il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~----- 142 (582)
+|+++|+++.|+++. ++++|||+|.+||++||+|+||||||||.++|+|+..++.|.+ .+++.....
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I----~~~G~~~~~~~~~~ 78 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSI----LLDGKPLAPKKRAK 78 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceE----EECCcccCccccch
Confidence 799999999998877 9999999999999999999999999999999999999986643 333322111
Q ss_pred --HHHHHHhccccCCC-c----chHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHh
Q 007982 143 --EKEAEILGAQEDGG-G----EQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALF 215 (582)
Q Consensus 143 --~~~~~~~~~~~~~~-~----~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~ 215 (582)
....+.+ +|++.. . .+..-+.+.+........++++.++|+.+|++..+.+++|.+|||||+|||||||||+
T Consensus 79 ~~~~~VQmV-FQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~eLSGGQ~QRiaIARAL~ 157 (252)
T COG1124 79 AFYRPVQMV-FQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPHELSGGQRQRIAIARALI 157 (252)
T ss_pred hhccceeEE-ecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCchhcChhHHHHHHHHHHhc
Confidence 1111222 333321 1 1222233334332334556679999999999999999999999999999999999999
Q ss_pred cCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEE
Q 007982 216 INPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFY 277 (582)
Q Consensus 216 ~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~ 277 (582)
.+|++||||||||+||+.....++++|.+. +.|+||||||+..+..+||||++|++|+++..
T Consensus 158 ~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~ 223 (252)
T COG1124 158 PEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEI 223 (252)
T ss_pred cCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEe
Confidence 999999999999999999999999988654 56999999999999999999999999999753
No 57
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-44 Score=347.88 Aligned_cols=196 Identities=30% Similarity=0.398 Sum_probs=156.6
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhcc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILGA 151 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 151 (582)
.++++++++.|++..+|+|+||+|.+||+++||||||||||||||+|+|+..|+.|.+ .+++....-......+.+
T Consensus 3 ~l~i~~v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V----~~~g~~v~~p~~~~~~vF 78 (248)
T COG1116 3 LLEIEGVSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEV----LLDGRPVTGPGPDIGYVF 78 (248)
T ss_pred eEEEEeeEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE----EECCcccCCCCCCEEEEe
Confidence 6899999999999999999999999999999999999999999999999999986643 233221100000001112
Q ss_pred ccC---CCcchHHHHHHHHHc--CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCC
Q 007982 152 QED---GGGEQLERVYERLEA--LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEP 226 (582)
Q Consensus 152 ~~~---~~~~~~~~~~~~l~~--~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEP 226 (582)
|.. +..+..+++...+.. ....+.++++.++|+.+||.+ ..+++|++|||||||||+|||||+.+|+|||||||
T Consensus 79 Q~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~-~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlDEP 157 (248)
T COG1116 79 QEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAG-FEDKYPHQLSGGMRQRVAIARALATRPKLLLLDEP 157 (248)
T ss_pred ccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcc-hhhcCccccChHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 222 122334454444432 355666779999999999985 57899999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHh----hcCcEEEEEecCHHHHHhhcCeEEEEeCC
Q 007982 227 TNHLDLEACVWLEETLK----KFDRILVVISHSQDFLNGVCTNIIHMQNK 272 (582)
Q Consensus 227 t~~LD~~~~~~l~~~l~----~~~~tviivsHd~~~~~~~~d~i~~l~~G 272 (582)
+++||..++..+.+.|. +.+.|||+||||.+++-.++|||++|.++
T Consensus 158 FgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 158 FGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred cchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 99999999987776654 45789999999999999999999999983
No 58
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.4e-44 Score=328.65 Aligned_cols=196 Identities=29% Similarity=0.463 Sum_probs=172.8
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------ee
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------------LR 431 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------------~~ 431 (582)
||+|+||++.|++++++|+||||+|++||++-|+||||||||||||+|++..+|++|.|...++ .+
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 5899999999998877999999999999999999999999999999999999999999987653 36
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcC-----C-CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEY-----P-GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
+|.++|++. +-.+.|+++++.... + ..-..++.++|+.+||.+.....| .+|||||||||+||||++.+|+
T Consensus 81 IGvVFQD~r--LL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-~~LSGGEQQRvaIARAiV~~P~ 157 (223)
T COG2884 81 IGVVFQDFR--LLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-SQLSGGEQQRVAIARAIVNQPA 157 (223)
T ss_pred eeeEeeecc--ccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-cccCchHHHHHHHHHHHccCCC
Confidence 899999864 556788888876432 1 123467889999999998776666 6999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEc
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWE 564 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~ 564 (582)
|||.||||.+|||+....|++++.++ |.||||.|||.+++.++-.|++.+++|+++.++
T Consensus 158 vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 158 VLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred eEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 99999999999999999888887664 679999999999999999999999999998644
No 59
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.7e-44 Score=351.02 Aligned_cols=208 Identities=26% Similarity=0.406 Sum_probs=165.4
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAEI 148 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 148 (582)
+++++||++.|+++.+++|+||++++|++++|+||||||||||||+|+|+.+|..|. +..++..+ ........
T Consensus 2 ~L~~~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~----V~l~g~~i~~~~~kelAk~ 77 (258)
T COG1120 2 MLEVENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGE----VLLDGKDIASLSPKELAKK 77 (258)
T ss_pred eeEEEEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCE----EEECCCchhhcCHHHHhhh
Confidence 589999999999999999999999999999999999999999999999999987654 33333222 22333444
Q ss_pred hccccCC-----CcchHHHHHH----HHHcCC--hhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 149 LGAQEDG-----GGEQLERVYE----RLEALD--ASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 149 ~~~~~~~-----~~~~~~~~~~----~l~~~~--~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
+++.++. ...+.+-+.. ....+. ..+.++.+.+.|+.+|+.+ +.++++.+|||||||||.|||||+++
T Consensus 78 ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~-la~r~~~~LSGGerQrv~iArALaQ~ 156 (258)
T COG1120 78 LAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEH-LADRPVDELSGGERQRVLIARALAQE 156 (258)
T ss_pred EEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHH-HhcCcccccChhHHHHHHHHHHHhcC
Confidence 4432211 1222222211 111111 3344557899999999974 67899999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|++||||||||+||+.....++++++++ +.|+|+|+||++++.++||++++|++|+++. .|.+.+.+
T Consensus 157 ~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a-~G~p~evl 227 (258)
T COG1120 157 TPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVA-QGTPEEVL 227 (258)
T ss_pred CCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEe-ecCcchhc
Confidence 9999999999999999999999999876 5799999999999999999999999999975 57766554
No 60
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-43 Score=336.57 Aligned_cols=214 Identities=24% Similarity=0.333 Sum_probs=174.8
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHH
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAE 147 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~ 147 (582)
..|++++|+++|+++.+++|+||+|++||+++|+||||||||||||+|.|+..|+.|.+.. ...+.... .......
T Consensus 7 ~~I~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i-~G~~i~~ls~~~~~~ir~ 85 (263)
T COG1127 7 PLIEVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILI-DGEDIPQLSEEELYEIRK 85 (263)
T ss_pred ceEEEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEE-cCcchhccCHHHHHHHHh
Confidence 3799999999999999999999999999999999999999999999999999998775421 11111111 1111122
Q ss_pred Hhc--cccC---CCcchHHHHHHHH---HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCC
Q 007982 148 ILG--AQED---GGGEQLERVYERL---EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPT 219 (582)
Q Consensus 148 ~~~--~~~~---~~~~~~~~~~~~l---~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~ 219 (582)
.++ +|.. ...++++++...+ ..++...+++.+..-|+.+||.....+++|++|||||++|++||||++.+|+
T Consensus 86 r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~PsELSGGM~KRvaLARAialdPe 165 (263)
T COG1127 86 RMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYPSELSGGMRKRVALARAIALDPE 165 (263)
T ss_pred heeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCchhhcchHHHHHHHHHHHhcCCC
Confidence 222 2322 2234566664433 3577888899999999999998876889999999999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 220 ILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 220 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
+|++||||+||||.+...+.++|+++ +.|+|+||||++.+..+|||+++|.+|+|+ +.|++++...
T Consensus 166 ll~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~-~~Gt~~el~~ 235 (263)
T COG1127 166 LLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVI-AEGTPEELLA 235 (263)
T ss_pred EEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEE-EeCCHHHHHh
Confidence 99999999999999999998888764 679999999999999999999999999997 4688887654
No 61
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-43 Score=347.40 Aligned_cols=203 Identities=27% Similarity=0.358 Sum_probs=179.5
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~ 433 (582)
+|+++++++.|+ ...+++||||+|+.||.+||.||||||||||||+|+|+..|++|.|..++. .++|
T Consensus 2 ~i~i~~~~~~~~-~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VG 80 (345)
T COG1118 2 SIRINNVKKRFG-AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVG 80 (345)
T ss_pred ceeehhhhhhcc-cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhccee
Confidence 578999999996 467899999999999999999999999999999999999999999987654 4699
Q ss_pred EechhhhhhcCCcccHHHHHHhcC------C--CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEY------P--GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
+++|+++ +.+.+|+.+++.... + .....++.++|..+.|++...++| .+|||||||||+|||||+.+|+
T Consensus 81 fvFQ~YA--LF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-~QLSGGQrQRVALARALA~eP~ 157 (345)
T COG1118 81 FVFQHYA--LFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-AQLSGGQRQRVALARALAVEPK 157 (345)
T ss_pred EEEechh--hcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-hhcChHHHHHHHHHHHhhcCCC
Confidence 9999976 677899999987543 1 123567889999999998877666 7999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNE----WDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
+||||||+++||..-+..+...|++ ++.|+|+||||.+++.++||||++|++|+|. ..|+++++..+
T Consensus 158 vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ie-qvg~p~ev~~~ 228 (345)
T COG1118 158 VLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIE-QVGPPDEVYDH 228 (345)
T ss_pred eEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeee-eeCCHHHHhcC
Confidence 9999999999999998888877765 4789999999999999999999999999996 47888887654
No 62
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-43 Score=361.15 Aligned_cols=205 Identities=26% Similarity=0.358 Sum_probs=179.9
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEE
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQ 434 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~ 434 (582)
.+.++++|+++.|+ +..+++|+||+|.+||+++|+||||||||||||+|+|+..|++|+|...+. +.+++
T Consensus 3 ~~~l~i~~v~k~yg-~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig~ 81 (352)
T COG3842 3 KPALEIRNVSKSFG-DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIGM 81 (352)
T ss_pred CceEEEEeeeeecC-CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccce
Confidence 46799999999997 578999999999999999999999999999999999999999999987653 46899
Q ss_pred echhhhhhcCCcccHHHHHHhcCC-----C-C-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEYP-----G-N-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~~-----~-~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
++|+++ +.+.+|+.+|+..... . . ..+++.++|+.++|.+...++| ++|||||||||+|||||+.+|+||
T Consensus 82 VFQ~YA--LFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-~qLSGGQqQRVALARAL~~~P~vL 158 (352)
T COG3842 82 VFQSYA--LFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-HQLSGGQQQRVALARALVPEPKVL 158 (352)
T ss_pred eecCcc--cCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-hhhChHHHHHHHHHHHhhcCcchh
Confidence 999965 7788999999865432 1 1 2357999999999998776655 899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHH----hcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 508 LLDEPTNHLDIETIDSLAEALN----EWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~----~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
|||||.++||..-+..+...++ +.+.|.|+||||.+++..++|||.||++|+|. --|+++++...
T Consensus 159 LLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~-Q~gtP~eiY~~ 227 (352)
T COG3842 159 LLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIE-QVGTPEEIYER 227 (352)
T ss_pred hhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCcee-ecCCHHHHhhC
Confidence 9999999999988877766554 45789999999999999999999999999996 47888887664
No 63
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.6e-42 Score=358.40 Aligned_cols=202 Identities=24% Similarity=0.334 Sum_probs=172.8
Q ss_pred eEEEEEEEEEecC---CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------
Q 007982 366 VLQFVEVTFGYTP---DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~---~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------- 429 (582)
||+++|++++|++ ...+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~ 80 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKA 80 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 5899999999963 246999999999999999999999999999999999999999999987542
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHcc
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 502 (582)
..++|++|++. +....|+.+++... .+.. ..+++.++++.+||.+... +++.+|||||||||+|||||+.
T Consensus 81 r~~Ig~v~Q~~~--l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~-~~~~~LSgGqkQRV~IARAL~~ 157 (343)
T TIGR02314 81 RRQIGMIFQHFN--LLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHD-SYPSNLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEECCcc--ccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-CChhhCCHHHHHHHHHHHHHHh
Confidence 25899999863 44456888776532 1111 2356788999999987654 4568999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|+++ ..|++.++.
T Consensus 158 ~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv-~~g~~~~v~ 229 (343)
T TIGR02314 158 NPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELI-EQGTVSEIF 229 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHH
Confidence 99999999999999999999999988764 679999999999999999999999999997 478888775
No 64
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.3e-42 Score=353.75 Aligned_cols=206 Identities=24% Similarity=0.323 Sum_probs=177.0
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeE
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRI 432 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~ 432 (582)
..++|+++|++++|++ ..+|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|...+. ..+
T Consensus 4 ~~~~i~i~~l~k~~~~-~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 4 SVAPIDFRNVEKRYGD-KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred CCceEEEEeEEEEECC-eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 3568999999999964 67999999999999999999999999999999999999999999987652 358
Q ss_pred EEechhhhhhcCCcccHHHHHHh--c-CCC--C-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIK--E-YPG--N-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~--~-~~~--~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
+|++|... +....|+.+++.. . +.. . ...++.++++.+++.... ++++++|||||||||+||+||+.+|++
T Consensus 83 g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~aL~~~P~l 159 (306)
T PRK13537 83 GVVPQFDN--LDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKA-DAKVGELSGGMKRRLTLARALVNDPDV 159 (306)
T ss_pred EEEeccCc--CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHh-cCchhhCCHHHHHHHHHHHHHhCCCCE
Confidence 99999853 4456788877642 1 111 1 234577899999997654 467799999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
|||||||+|||+.++..+.+.|+++ +.|||++||+++++.++||+|++|++|+++ +.|+++++...
T Consensus 160 llLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~-~~g~~~~l~~~ 228 (306)
T PRK13537 160 LVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKI-AEGAPHALIES 228 (306)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHhc
Confidence 9999999999999999999999876 579999999999999999999999999996 58999888654
No 65
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-42 Score=353.84 Aligned_cols=204 Identities=25% Similarity=0.360 Sum_probs=178.9
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEe
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQF 435 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~ 435 (582)
..|+++|+++.|++.. +++++||+|..||+++|+||||||||||||+|+|+..|++|+|...+. +.++++
T Consensus 2 ~~i~l~~v~K~yg~~~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iamV 80 (338)
T COG3839 2 AELELKNVRKSFGSFE-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAMV 80 (338)
T ss_pred cEEEEeeeEEEcCCce-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEEE
Confidence 3689999999997433 899999999999999999999999999999999999999999987653 469999
Q ss_pred chhhhhhcCCcccHHHHHHhcCC-----CC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 007982 436 HQHLAEKLDMDMSALQYMIKEYP-----GN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLL 509 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 509 (582)
+|+++ +.+.+|+.+++..... +. ..++++++++.++|++.+.++| .+|||||||||+|||||+++|+++||
T Consensus 81 FQ~yA--LyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-~~LSGGQrQRVAlaRAlVr~P~v~L~ 157 (338)
T COG3839 81 FQNYA--LYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-LQLSGGQRQRVALARALVRKPKVFLL 157 (338)
T ss_pred eCCcc--ccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-ccCChhhHHHHHHHHHHhcCCCEEEe
Confidence 99975 6788999999865321 12 3567899999999999887665 89999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 510 DEPTNHLDIETIDSLAEALNE----WDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 510 DEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
|||+|+||...+..+...|++ ++.|+|+||||..++..++|||+||++|+|.. -|++.++.+.
T Consensus 158 DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q-~g~p~ely~~ 224 (338)
T COG3839 158 DEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ-VGTPLELYER 224 (338)
T ss_pred cCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee-cCChHHHhhC
Confidence 999999999998887777665 46799999999999999999999999999975 6777777654
No 66
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-43 Score=341.68 Aligned_cols=209 Identities=22% Similarity=0.336 Sum_probs=160.1
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhc
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILG 150 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 150 (582)
.+|+++|++++|++.++|+||||+|++|++++||||||||||||+|+|.|+..|..|.+. +.+...........++
T Consensus 3 ~~i~v~nl~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~----~~g~~~~~~~~~~~Ig 78 (254)
T COG1121 3 PMIEVENLTVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIK----IFGKPVRKRRKRLRIG 78 (254)
T ss_pred cEEEEeeeEEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEE----EccccccccccCCeEE
Confidence 379999999999976899999999999999999999999999999999998888765432 2111110000001122
Q ss_pred cccC-------CCcchHHHHHHH----H--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 151 AQED-------GGGEQLERVYER----L--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 151 ~~~~-------~~~~~~~~~~~~----l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
+.++ ....+.+-+.-. . .........+.+.++|+.+|+. ++.++++.+|||||+|||.|||||+.+
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~~r~i~~LSGGQ~QRV~lARAL~~~ 157 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLRDRQIGELSGGQKQRVLLARALAQN 157 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhhCCcccccCcHHHHHHHHHHHhccC
Confidence 1111 112222222111 0 0111233468899999999997 578999999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
|++|||||||+|+|+.++..++++|+++ ++|||+||||++.+..+||+|+.|++..+ +.|+++++..
T Consensus 158 p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln~~~~--~~G~~~~~~~ 227 (254)
T COG1121 158 PDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLNRHLI--ASGPPEEVLT 227 (254)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEcCeeE--eccChhhccC
Confidence 9999999999999999999999998765 67999999999999999999999976543 4688777653
No 67
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.3e-42 Score=351.49 Aligned_cols=207 Identities=28% Similarity=0.404 Sum_probs=180.2
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQ 434 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~ 434 (582)
.+++++|+++.|+.++.+|+||||+|++|+++||+||||||||||+|+|+|++.|++|+|...+. ..+||
T Consensus 3 ~~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~igy 82 (293)
T COG1131 3 EVIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIGY 82 (293)
T ss_pred ceeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheEE
Confidence 35789999999963468999999999999999999999999999999999999999999987762 25899
Q ss_pred echhhhhhcCCcccHHHHHHh---cCCC---ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 007982 435 FHQHLAEKLDMDMSALQYMIK---EYPG---NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLL 508 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 508 (582)
++|.+. +...+|+.+++.. .+.. ...++++++++.+||.... ++++++||+||||||.||+||+.+|+|||
T Consensus 83 ~~~~~~--~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~lS~G~kqrl~ia~aL~~~P~lli 159 (293)
T COG1131 83 VPQEPS--LYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-NKKVRTLSGGMKQRLSIALALLHDPELLI 159 (293)
T ss_pred EccCCC--CCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-CcchhhcCHHHHHHHHHHHHHhcCCCEEE
Confidence 999865 5667888877642 2221 2356799999999998744 56789999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---C-ceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHHH
Q 007982 509 LDEPTNHLDIETIDSLAEALNEW---D-GGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHLK 575 (582)
Q Consensus 509 LDEPt~~LD~~~~~~l~~~l~~~---~-~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~ 575 (582)
|||||+||||.++..+.+.|+++ + .|||++||.++++..+||+|++|++|+++ +.|+.+++.....
T Consensus 160 LDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~-~~g~~~~l~~~~~ 229 (293)
T COG1131 160 LDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKII-AEGTPEELKEKFG 229 (293)
T ss_pred ECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEE-EeCCHHHHHHhhc
Confidence 99999999999999999999876 3 59999999999999999999999999997 5789888776644
No 68
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.4e-42 Score=338.52 Aligned_cols=192 Identities=30% Similarity=0.447 Sum_probs=163.0
Q ss_pred eEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------e
Q 007982 366 VLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------------L 430 (582)
Q Consensus 366 ~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------------~ 430 (582)
+|+++|++++|+++ +++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. .
T Consensus 1 ~l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 1 MIRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred CeEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 47899999999643 46999999999999999999999999999999999999999999987652 1
Q ss_pred eEEEechhhhhhcCCcccHHHHHHhc-----CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCC
Q 007982 431 RIAQFHQHLAEKLDMDMSALQYMIKE-----YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 431 ~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 504 (582)
.++|++|... +....++.+++... ... ...+++.++++.+|+.+... +++.+|||||||||+|||||+.+|
T Consensus 81 ~i~~~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LSgG~~qrv~laral~~~p 157 (216)
T TIGR00960 81 HIGMVFQDHR--LLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAH-ALPMQLSGGEQQRVAIARAIVHKP 157 (216)
T ss_pred hceEEecCcc--ccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-CChhhCCHHHHHHHHHHHHHhcCC
Confidence 4788888753 33456777766421 111 12456788999999986554 456899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeE
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAV 560 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i 560 (582)
++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|++
T Consensus 158 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 158 PLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999998876 57999999999999999999999999974
No 69
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.1e-42 Score=339.81 Aligned_cols=200 Identities=26% Similarity=0.351 Sum_probs=169.2
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------eeE
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------------LRI 432 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------------~~~ 432 (582)
|+++|+++.|+ +..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..+
T Consensus 1 l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i 79 (235)
T cd03261 1 IELRGLTKSFG-GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRM 79 (235)
T ss_pred CeEEEEEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcce
Confidence 47899999996 467999999999999999999999999999999999999999999987542 237
Q ss_pred EEechhhhhhcCCcccHHHHHHhc---CCC-C---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE---YPG-N---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~---~~~-~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
+|++|... +....++.+++... +.. . ..+++.++++.+|+.... ++++.+|||||||||+|||||+.+|+
T Consensus 80 ~~v~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~ia~al~~~p~ 156 (235)
T cd03261 80 GMLFQSGA--LFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-DLYPAELSGGMKKRVALARALALDPE 156 (235)
T ss_pred EEEccCcc--cCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 88888753 33456777776432 111 1 134578899999997655 45678999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++++.
T Consensus 157 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 225 (235)
T cd03261 157 LLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIV-AEGTPEELR 225 (235)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEE-EecCHHHHc
Confidence 99999999999999999999998764 579999999999999999999999999996 578887764
No 70
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-42 Score=325.33 Aligned_cols=210 Identities=27% Similarity=0.380 Sum_probs=166.2
Q ss_pred ceEEeeeEEEE-CCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHH---HHHHHHHHH
Q 007982 72 DIRIESLSVTF-HGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEE---RLKLEKEAE 147 (582)
Q Consensus 72 ~i~v~nls~~y-~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~ 147 (582)
+|+++||++.| +++.+|+||||+|++||+++||||||||||||||+|+|+..++.|.+... ..+.. ...+++...
T Consensus 3 ~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~-g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFN-GVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEec-ccchhccchHHHHHHHH
Confidence 79999999999 78899999999999999999999999999999999999988876643211 00101 011222233
Q ss_pred Hhcc--ccCC---CcchHHHHHH----------HHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHH
Q 007982 148 ILGA--QEDG---GGEQLERVYE----------RLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALAR 212 (582)
Q Consensus 148 ~~~~--~~~~---~~~~~~~~~~----------~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 212 (582)
.+++ |..+ ...++.++.. .+-.+...+.+..+.+.|+++|+.+. ...+..+|||||+|||+|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~-A~qra~~LSGGQQQRVaIAR 160 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK-AYQRASTLSGGQQQRVAIAR 160 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH-HHHHhccCCcchhHHHHHHH
Confidence 3332 2221 2333444322 22234445667789999999999764 56789999999999999999
Q ss_pred HHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 213 ALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 213 aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
||+++|++||.|||+++|||.+...++++|++. +.|||+..|+++.+.++||||+-|++|+++ |+|+.++.
T Consensus 161 aL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~iv-fDg~~~el 235 (258)
T COG3638 161 ALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIV-FDGPASEL 235 (258)
T ss_pred HHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEE-EeCChhhh
Confidence 999999999999999999999999999999764 689999999999999999999999999997 67887663
No 71
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-42 Score=338.47 Aligned_cols=209 Identities=28% Similarity=0.404 Sum_probs=170.7
Q ss_pred ceEEeeeEEEECCe-eeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHH----HHHHHHH
Q 007982 72 DIRIESLSVTFHGH-DLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEER----LKLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~~~-~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~----~~~~~~~ 146 (582)
+++++|++++|++. .+|+++||+|++|++++|+|+||||||||+++|+|+..|..|.+ .+++.. .......
T Consensus 3 ~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v----~~~g~~~~~~~~~~~~~ 78 (235)
T COG1122 3 MIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEV----LVDGLDTSSEKSLLELR 78 (235)
T ss_pred eEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEE----EECCeeccchhhHHHhh
Confidence 78999999999775 99999999999999999999999999999999999999986653 222221 1122222
Q ss_pred HHhc--cccCCCc----chHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 147 EILG--AQEDGGG----EQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 147 ~~~~--~~~~~~~----~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
..++ +|++..+ .+.+++...+. .++.+++++++.++|+.+|+.+ ..++++.+|||||||||+||.+|+.+|
T Consensus 79 ~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~-~~~r~p~~LSGGqkqRvaIA~vLa~~P 157 (235)
T COG1122 79 QKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEE-LLDRPPFNLSGGQKQRVAIAGVLAMGP 157 (235)
T ss_pred cceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchh-hccCCccccCCcceeeHHhhHHHHcCC
Confidence 3333 3433322 33444544433 3556678899999999999975 578999999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
++|||||||++||+.++.++++.++++ +.|+|++|||++++..+||++++|++|+++ +.|.+.++..
T Consensus 158 ~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~-~~g~p~~i~~ 228 (235)
T COG1122 158 EILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKIL-ADGDPAEIFN 228 (235)
T ss_pred CEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEe-ecCCHHHHhh
Confidence 999999999999999999999999876 469999999999999999999999999996 5677666553
No 72
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-41 Score=357.14 Aligned_cols=204 Identities=25% Similarity=0.296 Sum_probs=175.8
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEec
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFH 436 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~ 436 (582)
+|+++|++++|+++..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|...+. ..++|++
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~ 82 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAMVF 82 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEEe
Confidence 6899999999943467999999999999999999999999999999999999999999987653 3589999
Q ss_pred hhhhhhcCCcccHHHHHHhcCC-----CC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 007982 437 QHLAEKLDMDMSALQYMIKEYP-----GN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLD 510 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 510 (582)
|++. +.+..|+.+++..... .. ..+++.++++.+||.+... +++.+|||||||||+|||||+.+|+|||||
T Consensus 83 Q~~~--lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-~~~~~LSgGq~QRvalARAL~~~P~llLLD 159 (356)
T PRK11650 83 QNYA--LYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLD-RKPRELSGGQRQRVAMGRAIVREPAVFLFD 159 (356)
T ss_pred CCcc--ccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhh-CChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9864 5567788888754321 11 2356789999999987654 556899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 511 EPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 511 EPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
|||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|++. ..|+++++...
T Consensus 160 EP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~-~~g~~~~~~~~ 225 (356)
T PRK11650 160 EPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAE-QIGTPVEVYEK 225 (356)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEE-EECCHHHHHhC
Confidence 999999999999988887654 679999999999999999999999999997 47888887553
No 73
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.9e-41 Score=353.42 Aligned_cols=207 Identities=24% Similarity=0.337 Sum_probs=177.0
Q ss_pred CCCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------ee
Q 007982 362 LPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LR 431 (582)
Q Consensus 362 ~~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~ 431 (582)
.+.++|+++|++++|+ ++.+|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|...+. ..
T Consensus 37 ~~~~~i~i~nl~k~y~-~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 37 MSTVAIDLAGVSKSYG-DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred CCceeEEEEEEEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 3456899999999996 467999999999999999999999999999999999999999999987652 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHh---cCCCC---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIK---EYPGN---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
++|++|... +....++.+++.. .+... ..+.+.++++.++|.... ++++.+|||||||||+||+||+.+|+
T Consensus 116 ig~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~-~~~~~~LS~G~kqrv~lA~aL~~~P~ 192 (340)
T PRK13536 116 IGVVPQFDN--LDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-DARVSDLSGGMKRRLTLARALINDPQ 192 (340)
T ss_pred EEEEeCCcc--CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-CCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 899998753 4455677777642 12111 234567889999998654 45679999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
+|||||||+|||+.++..+.++|+++ +.|||++||+++++.++||+|++|++|+++ +.|++++++..
T Consensus 193 lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~-~~g~~~~l~~~ 262 (340)
T PRK13536 193 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKI-AEGRPHALIDE 262 (340)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHhh
Confidence 99999999999999999999999875 579999999999999999999999999996 68999988654
No 74
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-41 Score=331.99 Aligned_cols=192 Identities=22% Similarity=0.389 Sum_probs=163.0
Q ss_pred EEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------eeEEEechhh
Q 007982 368 QFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------LRIAQFHQHL 439 (582)
Q Consensus 368 ~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------~~~~~~~q~~ 439 (582)
+++|++++|++.+.+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.+. ..++|++|..
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~~ 80 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQDV 80 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecCh
Confidence 36899999964257999999999999999999999999999999999999999999987653 2588999885
Q ss_pred hhhcCCcccHHHHHHhcC--CCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCC
Q 007982 440 AEKLDMDMSALQYMIKEY--PGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLD 517 (582)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD 517 (582)
...+ +..++.+++.... ......++.++++.+|+.+... +++.+|||||||||+|||||+.+|++|||||||+|||
T Consensus 81 ~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 81 DYQL-FTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKE-RHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred hhhh-hhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcC-CCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 3222 2457777764321 1223356889999999986554 5668999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEE
Q 007982 518 IETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVT 561 (582)
Q Consensus 518 ~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 561 (582)
+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999876 579999999999999999999999999873
No 75
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.6e-41 Score=327.90 Aligned_cols=202 Identities=26% Similarity=0.426 Sum_probs=156.6
Q ss_pred ceEEeeeEEEECC----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee---ee-chHHHHHHH
Q 007982 72 DIRIESLSVTFHG----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV---IS-CDEERLKLE 143 (582)
Q Consensus 72 ~i~v~nls~~y~~----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~---i~-~~~~~~~~~ 143 (582)
+++++||++.|+. ..+|+++||+|++||+++|+|||||||||||++|+++..|+.|.+... +. ...... ..
T Consensus 1 ~i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~-~~ 79 (226)
T COG1136 1 MIELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKEL-AK 79 (226)
T ss_pred CcEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHH-HH
Confidence 3679999999953 379999999999999999999999999999999999999987653211 11 111111 11
Q ss_pred HHHHHhccccC-----CCcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhc
Q 007982 144 KEAEILGAQED-----GGGEQLERVYER--LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFI 216 (582)
Q Consensus 144 ~~~~~~~~~~~-----~~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~ 216 (582)
-....+++.++ +..+..+++.-. +..........++.++++.+|+.+...+++|.+|||||||||||||||+.
T Consensus 80 ~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARAL~~ 159 (226)
T COG1136 80 LRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARALIN 159 (226)
T ss_pred HHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHHHhc
Confidence 12233443222 223445555432 22333335677889999999998666558999999999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEE
Q 007982 217 NPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLK 275 (582)
Q Consensus 217 ~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~ 275 (582)
+|++||.||||.+||.++...+++++.++ +.||||||||.+.+. +|||++.|++|++.
T Consensus 160 ~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~-~~dr~i~l~dG~~~ 221 (226)
T COG1136 160 NPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAK-YADRVIELKDGKIE 221 (226)
T ss_pred CCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHH-hCCEEEEEeCCeee
Confidence 99999999999999999999999998765 679999999988775 89999999999853
No 76
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-42 Score=331.15 Aligned_cols=205 Identities=31% Similarity=0.419 Sum_probs=178.1
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------ee
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LR 431 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~ 431 (582)
.+++++++++++|++ ..+++||||+|.+||+++|+||||||||||+++|+|+++|++|+|.+.+. ..
T Consensus 2 ~~lL~v~~l~k~FGG-l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~G 80 (250)
T COG0411 2 TPLLEVRGLSKRFGG-LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLG 80 (250)
T ss_pred CceeeeccceeecCC-EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhcc
Confidence 368999999999964 78999999999999999999999999999999999999999999998764 23
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcC------------CC---C---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHH
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEY------------PG---N---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSR 493 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~------------~~---~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqr 493 (582)
+++-+|.. .+...+|+++++.-.. +. . ..+++.++|+.+||.+.. +.+.++||+|||+|
T Consensus 81 i~RTFQ~~--rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a-~~~A~~LsyG~qR~ 157 (250)
T COG0411 81 IARTFQIT--RLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELA-DRPAGNLSYGQQRR 157 (250)
T ss_pred ceeecccc--cccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhh-cchhhcCChhHhHH
Confidence 56667775 3567889998875320 11 1 235688999999998765 46789999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHH
Q 007982 494 VVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMD 569 (582)
Q Consensus 494 v~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 569 (582)
+.|||||+.+|++||||||.+||.+.....+.+.|++. +.||++|.|||+++..+||||+||+.|+++ .+|++++
T Consensus 158 LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~I-AeG~P~e 236 (250)
T COG0411 158 LEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVI-AEGTPEE 236 (250)
T ss_pred HHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCc-ccCCHHH
Confidence 99999999999999999999999999999999988765 479999999999999999999999999997 5999999
Q ss_pred HHHH
Q 007982 570 FKLH 573 (582)
Q Consensus 570 ~~~~ 573 (582)
...+
T Consensus 237 V~~d 240 (250)
T COG0411 237 VRNN 240 (250)
T ss_pred HhcC
Confidence 8764
No 77
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-42 Score=318.66 Aligned_cols=210 Identities=25% Similarity=0.411 Sum_probs=168.2
Q ss_pred ceEEeeeEEEECCee-eeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhc
Q 007982 72 DIRIESLSVTFHGHD-LIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILG 150 (582)
Q Consensus 72 ~i~v~nls~~y~~~~-il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 150 (582)
||++.+++++|+..+ +++||||+++.|+++||+|||||||||+||+|+.+..|+.|.+... .++....+ ....+.++
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~id-g~d~~~~p-~~vrr~IG 78 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTID-GVDTVRDP-SFVRRKIG 78 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEe-ecccccCh-HHHhhhcc
Confidence 589999999999875 9999999999999999999999999999999999988886643211 12211111 11112222
Q ss_pred cccCC-C------cchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceee
Q 007982 151 AQEDG-G------GEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLL 223 (582)
Q Consensus 151 ~~~~~-~------~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlL 223 (582)
..+.. . .......+..+..+...+.+.++.++.+.|++.+ ..++++.+||-||||||+|||||+++|+++||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~-~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vl 157 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLE-YLDRRVGEFSTGMKQKVAIARALVHDPSILVL 157 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHH-HHHHHHhhhchhhHHHHHHHHHHhcCCCeEEE
Confidence 11111 1 1112223456667778888999999999999965 67899999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 224 DEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 224 DEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||||||..++..+.++++++ +++||++||++.++..+||+|++|++|+++ +.|+.+...
T Consensus 158 DEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv-~~gs~~~l~ 221 (245)
T COG4555 158 DEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVV-LEGSIEALD 221 (245)
T ss_pred cCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEE-EcCCHHHHH
Confidence 9999999999999999998766 679999999999999999999999999997 567776543
No 78
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.2e-41 Score=369.68 Aligned_cols=207 Identities=33% Similarity=0.566 Sum_probs=181.5
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcC
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLD 444 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~ 444 (582)
.+|+++|++++|+ ++++|+++||+|.+|+++||||+||||||||||+|+|.+.|++|+|......+++|++|+.. .+
T Consensus 2 ~~i~~~~ls~~~g-~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~--~~ 78 (530)
T COG0488 2 SMITLENLSLAYG-DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPP--LD 78 (530)
T ss_pred ceEEEeeeEEeeC-CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCC--cC
Confidence 4789999999995 57899999999999999999999999999999999999999999999988889999999864 23
Q ss_pred CcccHHHHHHhcCC------------------------------------CChHHHHHHHHHhcCCCCccccCCCCCCCh
Q 007982 445 MDMSALQYMIKEYP------------------------------------GNEEEKMRAAIGRFGLTGKAQVMPMKNLSD 488 (582)
Q Consensus 445 ~~~~~~~~~~~~~~------------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~~~LSg 488 (582)
...|+.+.+..... ...+.++..+|..+|++.. .+|+++|||
T Consensus 79 ~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~--~~~~~~LSG 156 (530)
T COG0488 79 PEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE--DRPVSSLSG 156 (530)
T ss_pred CCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc--cCchhhcCH
Confidence 33355444332110 0113467778888999876 578999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHH
Q 007982 489 GQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIM 568 (582)
Q Consensus 489 Gqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~ 568 (582)
|||.||+||++|+.+|++|||||||||||.+++..|.+.|.++.+|||+||||.+|+..+|++|+.++.|++..|.|+++
T Consensus 157 G~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~gtviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny~ 236 (530)
T COG0488 157 GWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYPGTVIVVSHDRYFLDNVATHILELDRGKLTPYKGNYS 236 (530)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHhhheEEecCCceeEecCCHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 007982 569 DFKLHLKA 576 (582)
Q Consensus 569 ~~~~~~~~ 576 (582)
.|.+.-..
T Consensus 237 ~~~~~r~~ 244 (530)
T COG0488 237 SYLEQKAE 244 (530)
T ss_pred HHHHHHHH
Confidence 99886443
No 79
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-41 Score=353.75 Aligned_cols=204 Identities=25% Similarity=0.355 Sum_probs=176.9
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEE
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQ 434 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~ 434 (582)
.++|+++|+++.|+ +..+|+|+||+|.+||+++|+|||||||||||++|+|+++|++|+|...+. ..++|
T Consensus 4 ~~~l~~~~l~~~~~-~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 82 (351)
T PRK11432 4 KNFVVLKNITKRFG-SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICM 82 (351)
T ss_pred CcEEEEEeEEEEEC-CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 45899999999996 467999999999999999999999999999999999999999999987653 46899
Q ss_pred echhhhhhcCCcccHHHHHHhcC-----CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEY-----PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLL 508 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 508 (582)
++|++. +.+.+|+.+++.... +.. ..+++.++++.+||.+... +++.+|||||||||+|||||+.+|++||
T Consensus 83 vfQ~~~--lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~-r~~~~LSgGq~QRVaLARaL~~~P~lLL 159 (351)
T PRK11432 83 VFQSYA--LFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFED-RYVDQISGGQQQRVALARALILKPKVLL 159 (351)
T ss_pred EeCCcc--cCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhc-CChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 999864 556678888876421 111 2457889999999987654 4568999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 509 LDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 509 LDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|++.. .|+++++..
T Consensus 160 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~-~g~~~~~~~ 226 (351)
T PRK11432 160 FDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQ-IGSPQELYR 226 (351)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHh
Confidence 99999999999999998888654 6799999999999999999999999999974 789888754
No 80
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.1e-41 Score=348.24 Aligned_cols=204 Identities=24% Similarity=0.340 Sum_probs=173.5
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQ 434 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~ 434 (582)
.+|+++|++++|++ ..+|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 3 ~~i~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~ 81 (303)
T TIGR01288 3 VAIDLVGVSKSYGD-KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAIGV 81 (303)
T ss_pred cEEEEEeEEEEeCC-eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcEEE
Confidence 57999999999964 67999999999999999999999999999999999999999999987642 35889
Q ss_pred echhhhhhcCCcccHHHHHHh--c-CCCC---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 007982 435 FHQHLAEKLDMDMSALQYMIK--E-YPGN---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLL 508 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~--~-~~~~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 508 (582)
++|... +....|+.+++.. . +... ..+.+.++++.+++.... ++++.+|||||||||+|||||+.+|++||
T Consensus 82 v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~~p~lll 158 (303)
T TIGR01288 82 VPQFDN--LDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-DVRVALLSGGMKRRLTLARALINDPQLLI 158 (303)
T ss_pred Eecccc--CCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHh-cCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 998753 3445677777642 1 1111 124567889999998654 45678999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 509 LDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 509 LDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
|||||+|||+.++..+.+.|+++ +.|||++|||++++..+||+|++|++|+++ +.|+++++...
T Consensus 159 LDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~~ 225 (303)
T TIGR01288 159 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKI-AEGRPHALIDE 225 (303)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHhh
Confidence 99999999999999999999876 679999999999999999999999999996 58888887543
No 81
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-42 Score=318.80 Aligned_cols=205 Identities=22% Similarity=0.343 Sum_probs=173.2
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEe
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQF 435 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~ 435 (582)
||++.+++++|++...+++||||++..|+++||.|||||||||+||+|++++.|++|.|...+. ..+|.+
T Consensus 1 Ml~v~~l~K~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGVl 80 (245)
T COG4555 1 MLEVTDLTKSYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGVL 80 (245)
T ss_pred CeeeeehhhhccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhccee
Confidence 5889999999986444899999999999999999999999999999999999999999987642 235555
Q ss_pred chhhhhhcCCcccHHHHHHhc-----CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 007982 436 HQHLAEKLDMDMSALQYMIKE-----YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLL 509 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 509 (582)
+.. ..+...+|+.+++... ..+ ....++.++.++|++.+..+ +++..+|-|+||||+|||||+++|++|||
T Consensus 81 ~~e--~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~-rRv~~~S~G~kqkV~iARAlvh~P~i~vl 157 (245)
T COG4555 81 FGE--RGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLD-RRVGEFSTGMKQKVAIARALVHDPSILVL 157 (245)
T ss_pred cCC--cChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHH-HHHhhhchhhHHHHHHHHHHhcCCCeEEE
Confidence 522 2344567777776432 112 23567889999999987665 45689999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHH
Q 007982 510 DEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHL 574 (582)
Q Consensus 510 DEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~ 574 (582)
||||+|||+.+...+.+.+... +.+||++||++++++.+||+|+++++|+++ +.|+++.+.+.-
T Consensus 158 DEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv-~~gs~~~l~~r~ 224 (245)
T COG4555 158 DEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVV-LEGSIEALDART 224 (245)
T ss_pred cCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEE-EcCCHHHHHHHH
Confidence 9999999999999999888765 679999999999999999999999999996 699999887753
No 82
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-41 Score=338.86 Aligned_cols=195 Identities=26% Similarity=0.299 Sum_probs=167.8
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------eeEEEech
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------LRIAQFHQ 437 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------~~~~~~~q 437 (582)
.++|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|
T Consensus 10 ~~~l~i~~l~~~~~~-~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~q 88 (257)
T PRK11247 10 GTPLLLNAVSKRYGE-RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMFQ 88 (257)
T ss_pred CCcEEEEEEEEEECC-cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEec
Confidence 467999999999964 67999999999999999999999999999999999999999999987542 24889988
Q ss_pred hhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCC
Q 007982 438 HLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLD 517 (582)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD 517 (582)
... +....++.+++.........+++.++++.+|+.+... +++.+|||||||||+|||+|+.+|++|||||||+|||
T Consensus 89 ~~~--l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~~LD 165 (257)
T PRK11247 89 DAR--LLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRAN-EWPAALSGGQKQRVALARALIHRPGLLLLDEPLGALD 165 (257)
T ss_pred Ccc--CCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhc-CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCC
Confidence 753 3344688887754322223456788999999986554 5668999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 518 IETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 518 ~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 166 ~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 166 ALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999988764 5799999999999999999999999999964
No 83
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-41 Score=332.36 Aligned_cols=192 Identities=28% Similarity=0.373 Sum_probs=163.3
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEech
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFHQ 437 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~q 437 (582)
|+++|+++.|++ +++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|
T Consensus 1 l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v~q 79 (213)
T cd03259 1 LELKGLSKTYGS-VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQ 79 (213)
T ss_pred CeeeeeEEEeCC-eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEEcC
Confidence 468999999964 67999999999999999999999999999999999999999999987542 24788888
Q ss_pred hhhhhcCCcccHHHHHHhc--CCC----ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 438 HLAEKLDMDMSALQYMIKE--YPG----NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
... +....++.+++... ... ...+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|++|||||
T Consensus 80 ~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrl~la~al~~~p~~lllDE 156 (213)
T cd03259 80 DYA--LFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLL-NRYPHELSGGQQQRVALARALAREPSLLLLDE 156 (213)
T ss_pred chh--hccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhh-hcChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 753 33456777766421 111 1234578899999998654 45668999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 512 PTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
||+|||+.++..+.+.|.++ +.|||++|||++++..+||+|++|++|+++.
T Consensus 157 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~ 211 (213)
T cd03259 157 PLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQ 211 (213)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 99999999999999998774 5799999999999999999999999999863
No 84
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-41 Score=342.42 Aligned_cols=203 Identities=26% Similarity=0.369 Sum_probs=171.6
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
++|+++|+++.|++...+|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|.+.+. ..++
T Consensus 3 ~~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 3 NIIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred ceEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 47999999999964457999999999999999999999999999999999999999999987652 2488
Q ss_pred EechhhhhhcCCcccHHHHHHhcC-----CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEY-----PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
|++|.+...+ +..++.+++.... .. ...+++.++++.+|+.+.. ++++.+|||||+|||+|||||+.+|++|
T Consensus 83 ~v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~LSgG~~qrv~laraL~~~p~ll 160 (274)
T PRK13647 83 LVFQDPDDQV-FSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFR-DKPPYHLSYGQKKRVAIAGVLAMDPDVI 160 (274)
T ss_pred EEecChhhhh-ccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-cCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 9999853222 3457777764311 11 1234678899999997655 4566899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
||||||++||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|+++ ..|+++++
T Consensus 161 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 225 (274)
T PRK13647 161 VLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVL-AEGDKSLL 225 (274)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHh
Confidence 999999999999999999998765 579999999999999999999999999997 47877654
No 85
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.2e-41 Score=356.53 Aligned_cols=202 Identities=29% Similarity=0.425 Sum_probs=174.4
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
++|+++|++++|++ +.+|+|+||+|.+||+++|+||||||||||||+|+|+++|++|+|...+. ..++
T Consensus 2 ~~L~~~nls~~y~~-~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 2 PMIDVSDLSVEFGD-TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred ceEEEeeEEEEECC-EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 47999999999964 68999999999999999999999999999999999999999999987652 2488
Q ss_pred EechhhhhhcCCcccHHHHHHhc-------CC---CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKE-------YP---GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~ 503 (582)
+++|... +.+..++.+++... +. ....++++++++.+|+.+.. ++++.+|||||||||+|||||+++
T Consensus 81 ~v~q~~~--l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-~~~~~~LSgGerQRv~IArAL~~~ 157 (402)
T PRK09536 81 SVPQDTS--LSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-DRPVTSLSGGERQRVLLARALAQA 157 (402)
T ss_pred EEccCCC--CCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHHHHHcC
Confidence 9988753 44567787776431 11 12345688999999998654 467899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|++|||||||+|||+.++..+.++|+++ +.|||++|||++++.++|||+++|++|+++ ..|+++++.
T Consensus 158 P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv-~~G~~~ev~ 227 (402)
T PRK09536 158 TPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVR-AAGPPADVL 227 (402)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EecCHHHHh
Confidence 9999999999999999999999988875 569999999999999999999999999997 589998864
No 86
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-41 Score=347.01 Aligned_cols=205 Identities=20% Similarity=0.304 Sum_probs=170.8
Q ss_pred eEEEEEEEEEecCC----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------
Q 007982 366 VLQFVEVTFGYTPD----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------ 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------ 429 (582)
+|+++|+++.|++. ..+|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 48999999999643 25999999999999999999999999999999999999999999977421
Q ss_pred -----------------------eeEEEechhhhhhcCCcccHHHHHHhc-----CCC-ChHHHHHHHHHhcCCCCcccc
Q 007982 430 -----------------------LRIAQFHQHLAEKLDMDMSALQYMIKE-----YPG-NEEEKMRAAIGRFGLTGKAQV 480 (582)
Q Consensus 430 -----------------------~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~l~~~gl~~~~~~ 480 (582)
..++|++|++...+ +..++.+++... .+. ...+++.++++.+||.....+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l-~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~ 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQL-FEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCccccc-ccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 13789999753333 245777776422 111 123568899999999733334
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeC
Q 007982 481 MPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCEN 557 (582)
Q Consensus 481 ~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~ 557 (582)
+++.+|||||||||+|||+|+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||||++|++
T Consensus 161 ~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~ 240 (305)
T PRK13651 161 RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKD 240 (305)
T ss_pred CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEEC
Confidence 567899999999999999999999999999999999999999999988765 67999999999999999999999999
Q ss_pred CeEEEEcCCHHHHHH
Q 007982 558 QAVTRWEGDIMDFKL 572 (582)
Q Consensus 558 G~i~~~~g~~~~~~~ 572 (582)
|+++ .+|+++++..
T Consensus 241 G~i~-~~g~~~~~~~ 254 (305)
T PRK13651 241 GKII-KDGDTYDILS 254 (305)
T ss_pred CEEE-EECCHHHHhc
Confidence 9996 5788888654
No 87
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-41 Score=344.84 Aligned_cols=205 Identities=26% Similarity=0.353 Sum_probs=171.0
Q ss_pred eEEEEEEEEEecCC----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------
Q 007982 366 VLQFVEVTFGYTPD----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------ 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------ 429 (582)
||+++|++|.|+++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 58999999999632 25999999999999999999999999999999999999999999987652
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhcC-----CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKEY-----PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 500 (582)
..++|++|++...+ +..++.+++.... +.. ...++.++++.+||.....++++.+|||||||||+|||+|
T Consensus 81 ~~~~~ig~v~q~~~~~l-~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL 159 (288)
T PRK13643 81 PVRKKVGVVFQFPESQL-FEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGIL 159 (288)
T ss_pred HHHhhEEEEecCcchhc-ccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHH
Confidence 14788998753233 2357777764321 111 2345788899999964333467799999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ ++|+++++..
T Consensus 160 ~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 233 (288)
T PRK13643 160 AMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHII-SCGTPSDVFQ 233 (288)
T ss_pred HhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EECCHHHHHc
Confidence 9999999999999999999999999988764 579999999999999999999999999997 5899888754
No 88
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-41 Score=332.05 Aligned_cols=198 Identities=26% Similarity=0.380 Sum_probs=166.9
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEec
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQFH 436 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~~ 436 (582)
|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++
T Consensus 1 i~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (220)
T cd03265 1 IEVENLVKKYGD-FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVF 79 (220)
T ss_pred CEEEEEEEEECC-EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEEec
Confidence 478999999964 67999999999999999999999999999999999999999999987652 2478888
Q ss_pred hhhhhhcCCcccHHHHHHhc---CC--CC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 007982 437 QHLAEKLDMDMSALQYMIKE---YP--GN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLD 510 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~---~~--~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 510 (582)
|... +....++.+++... .. .. ..+++.++++.+|+.... +.++.+|||||||||+||||++.+|++||||
T Consensus 80 q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qr~~la~al~~~p~llllD 156 (220)
T cd03265 80 QDLS--VDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAA-DRLVKTYSGGMRRRLEIARSLVHRPEVLFLD 156 (220)
T ss_pred CCcc--ccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 8753 33445776665321 11 11 234678999999997654 4567899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHH
Q 007982 511 EPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMD 569 (582)
Q Consensus 511 EPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 569 (582)
|||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|++++
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~ 218 (220)
T cd03265 157 EPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIA-EGTPEE 218 (220)
T ss_pred CCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-eCChHH
Confidence 999999999999999988764 5799999999999999999999999999974 676654
No 89
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=4.6e-41 Score=352.31 Aligned_cols=203 Identities=23% Similarity=0.317 Sum_probs=176.2
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEe
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQF 435 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~ 435 (582)
++|+++|++++|++ ..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|...+. ..++|+
T Consensus 3 ~~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~v 81 (353)
T TIGR03265 3 PYLSIDNIRKRFGA-FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGIV 81 (353)
T ss_pred cEEEEEEEEEEeCC-eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEEE
Confidence 47999999999964 67999999999999999999999999999999999999999999988652 358999
Q ss_pred chhhhhhcCCcccHHHHHHhcC-----CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 007982 436 HQHLAEKLDMDMSALQYMIKEY-----PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLL 509 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 509 (582)
+|++. +.+..|+.+++.... +.. ...++.++++.+||.+... +++.+|||||||||+|||||+.+|++|||
T Consensus 82 ~Q~~~--lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~-~~~~~LSgGq~QRvaLARaL~~~P~llLL 158 (353)
T TIGR03265 82 FQSYA--LFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSER-KYPGQLSGGQQQRVALARALATSPGLLLL 158 (353)
T ss_pred eCCcc--cCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhh-CChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99863 555678888875321 111 2456889999999987665 45689999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 510 DEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 510 DEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|++. ..|+++++.+
T Consensus 159 DEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~-~~g~~~~~~~ 224 (353)
T TIGR03265 159 DEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIE-QVGTPQEIYR 224 (353)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHh
Confidence 9999999999999998888764 679999999999999999999999999997 4788888765
No 90
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.3e-41 Score=336.62 Aligned_cols=203 Identities=26% Similarity=0.397 Sum_probs=170.3
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------ee
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------------LR 431 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------------~~ 431 (582)
+|+++|+++.|++++++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..
T Consensus 1 ~l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 1 MLEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred CeEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 4789999999962457999999999999999999999999999999999999999999987542 13
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcC--------------CCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHH
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEY--------------PGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lA 497 (582)
++|++|... +....++.+++.... .....+++.++++.+|+.... ++++.+|||||||||+||
T Consensus 81 i~~v~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 81 IGMIFQHYN--LIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKA-YQRADQLSGGQQQRVAIA 157 (243)
T ss_pred eEEEcCCCc--ccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhh-cCCcccCCHHHHHHHHHH
Confidence 788888753 334567777664211 111235678899999997654 456789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|+++ ..|+++++.+
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~ 235 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIV-FDGAPSELDD 235 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEE-ecCCHHHhCh
Confidence 9999999999999999999999999999998765 569999999999999999999999999997 5788887643
No 91
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=348.16 Aligned_cols=208 Identities=23% Similarity=0.302 Sum_probs=174.6
Q ss_pred CCeEEEEEEEEEecC---------CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----
Q 007982 364 PPVLQFVEVTFGYTP---------DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~---------~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----- 429 (582)
+++|+++||++.|+. ...+|+||||+|.+||++||+|+||||||||+++|+|+++|++|+|.+.+.
T Consensus 3 ~~~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~ 82 (327)
T PRK11308 3 QPLLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKA 82 (327)
T ss_pred CceEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcC
Confidence 468999999999962 246899999999999999999999999999999999999999999987652
Q ss_pred ---------eeEEEechhhhhhcCCcccHHHHHHh---c---CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHH
Q 007982 430 ---------LRIAQFHQHLAEKLDMDMSALQYMIK---E---YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSR 493 (582)
Q Consensus 430 ---------~~~~~~~q~~~~~~~~~~~~~~~~~~---~---~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqr 493 (582)
..++|++|+....++...++.+.+.. . ... ...+++.++|+.+||.....++++.+|||||+||
T Consensus 83 ~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~QR 162 (327)
T PRK11308 83 DPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQRQR 162 (327)
T ss_pred CHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHHHH
Confidence 24899999875556666666655432 1 111 1235688999999996433345668999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHH
Q 007982 494 VVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMD 569 (582)
Q Consensus 494 v~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 569 (582)
|+|||||+.+|+|||+||||++||+.++..+.++|.++ +.|||+||||++++.++||+|++|++|+|++ .|+.++
T Consensus 163 v~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive-~g~~~~ 241 (327)
T PRK11308 163 IAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVE-KGTKEQ 241 (327)
T ss_pred HHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHH
Confidence 99999999999999999999999999999999988764 6799999999999999999999999999985 788777
Q ss_pred HHH
Q 007982 570 FKL 572 (582)
Q Consensus 570 ~~~ 572 (582)
+..
T Consensus 242 ~~~ 244 (327)
T PRK11308 242 IFN 244 (327)
T ss_pred Hhc
Confidence 654
No 92
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-41 Score=344.18 Aligned_cols=205 Identities=25% Similarity=0.305 Sum_probs=171.1
Q ss_pred eEEEEEEEEEecCC----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------
Q 007982 366 VLQFVEVTFGYTPD----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------ 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------ 429 (582)
.|+++|++++|++. .++|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 37899999999642 46999999999999999999999999999999999999999999987652
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 500 (582)
..++|++|.+...+. ..++.+++... .+.. ..+.+.++++.+||.....++++.+|||||||||+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lAraL 160 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLF-EETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIAGVL 160 (290)
T ss_pred HHHhhEEEEeeCchhhhh-hhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 247899997532332 35777766421 1111 2346788999999974333566799999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++.++||||++|++|+++ ++|++.++..
T Consensus 161 ~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~-~~g~~~~~~~ 235 (290)
T PRK13634 161 AMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVF-LQGTPREIFA 235 (290)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHhc
Confidence 9999999999999999999999999988764 579999999999999999999999999997 5888887643
No 93
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.5e-41 Score=348.52 Aligned_cols=208 Identities=18% Similarity=0.280 Sum_probs=174.8
Q ss_pred CCeEEEEEEEEEecC------------CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--
Q 007982 364 PPVLQFVEVTFGYTP------------DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~------------~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-- 429 (582)
+++|+++||+++|+. ...+++|+||+|.+||++||+|+||||||||+++|+|+++|++|+|.+.+.
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 578999999999952 246899999999999999999999999999999999999999999987542
Q ss_pred ------------eeEEEechhhhhhcCCcccHHHHHHhc---C----CCC-hHHHHHHHHHhcCCCCccccCCCCCCChh
Q 007982 430 ------------LRIAQFHQHLAEKLDMDMSALQYMIKE---Y----PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDG 489 (582)
Q Consensus 430 ------------~~~~~~~q~~~~~~~~~~~~~~~~~~~---~----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgG 489 (582)
..++|++|++...+.+..++.+++... + ... ..+.+.++++.+|+.....++.+.+||||
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LSgG 165 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFSGG 165 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCCHH
Confidence 258999998754466667777776421 1 111 23457889999999543334556899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcC
Q 007982 490 QRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEG 565 (582)
Q Consensus 490 qkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g 565 (582)
|+|||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||+|++|.+|+|++ .|
T Consensus 166 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive-~g 244 (331)
T PRK15079 166 QCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVE-LG 244 (331)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-Ec
Confidence 999999999999999999999999999999999999888764 5799999999999999999999999999975 78
Q ss_pred CHHHHHH
Q 007982 566 DIMDFKL 572 (582)
Q Consensus 566 ~~~~~~~ 572 (582)
+.+++..
T Consensus 245 ~~~~i~~ 251 (331)
T PRK15079 245 TYDEVYH 251 (331)
T ss_pred CHHHHHc
Confidence 8777654
No 94
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-41 Score=334.64 Aligned_cols=202 Identities=27% Similarity=0.410 Sum_probs=169.1
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------eeE
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------------LRI 432 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------------~~~ 432 (582)
|+++|++++|++++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..+
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i 80 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQI 80 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhcc
Confidence 468999999964257999999999999999999999999999999999999999999987542 137
Q ss_pred EEechhhhhhcCCcccHHHHHHhcC--------------CCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHH
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEY--------------PGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAW 498 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAr 498 (582)
+|++|... +....++.+++.... .....+++.++++.+|+.... ++++.+|||||||||+|||
T Consensus 81 ~~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~ 157 (241)
T cd03256 81 GMIFQQFN--LIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKA-YQRADQLSGGQQQRVAIAR 157 (241)
T ss_pred EEEcccCc--ccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhh-CCCcccCCHHHHHHHHHHH
Confidence 78888753 334467777664211 111234678899999997654 4566899999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 499 LAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 499 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||+.+|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ +.|+++++.+
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~ 234 (241)
T cd03256 158 ALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIV-FDGPPAELTD 234 (241)
T ss_pred HHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-eecCHHHhhH
Confidence 999999999999999999999999999988764 579999999999999999999999999997 5788887744
No 95
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=6.6e-41 Score=340.17 Aligned_cols=205 Identities=23% Similarity=0.358 Sum_probs=172.1
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------- 429 (582)
+.++|+++|+++.|+ ++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 4 ~~~~l~~~~l~~~~~-~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (269)
T PRK11831 4 VANLVDMRGVSFTRG-NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTV 82 (269)
T ss_pred ccceEEEeCeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHH
Confidence 356899999999996 467999999999999999999999999999999999999999999987542
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc---CCC--C--hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE---YPG--N--EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~~--~--~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
..++|++|... +....++.+++... ... . ....+.++++.+|+.+.. ++++.+|||||||||+|||||+
T Consensus 83 ~~~i~~v~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgGq~qrv~laral~ 159 (269)
T PRK11831 83 RKRMSMLFQSGA--LFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAA-KLMPSELSGGMARRAALARAIA 159 (269)
T ss_pred hhcEEEEecccc--cCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHh
Confidence 13788888743 33445777766421 111 1 124567889999998654 4566899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|+.+++.+
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~ 233 (269)
T PRK11831 160 LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIV-AHGSAQALQA 233 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEE-EeCCHHHHhc
Confidence 999999999999999999999999988775 569999999999999999999999999996 5788877654
No 96
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-41 Score=334.45 Aligned_cols=201 Identities=26% Similarity=0.305 Sum_probs=169.8
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEec
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFH 436 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~ 436 (582)
+|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++
T Consensus 2 ~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v~ 80 (239)
T cd03296 2 SIEVRNVSKRFGD-FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFVF 80 (239)
T ss_pred EEEEEeEEEEECC-EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEEe
Confidence 4899999999964 67999999999999999999999999999999999999999999987652 2478888
Q ss_pred hhhhhhcCCcccHHHHHHhcC---C-----CC--hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 437 QHLAEKLDMDMSALQYMIKEY---P-----GN--EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~~---~-----~~--~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
|.+. +....++.+++.... . .. ..+.+.++++.+|+.... ++++.+|||||+|||+|||||+.+|++
T Consensus 81 q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~l 157 (239)
T cd03296 81 QHYA--LFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLA-DRYPAQLSGGQRQRVALARALAVEPKV 157 (239)
T ss_pred cCCc--ccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhh-hcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 8753 334467777664211 1 11 124567889999997654 456689999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ ..|+++++.
T Consensus 158 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 225 (239)
T cd03296 158 LLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIE-QVGTPDEVY 225 (239)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EecCHHHHh
Confidence 9999999999999999999998765 569999999999999999999999999996 578887764
No 97
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-41 Score=342.09 Aligned_cols=205 Identities=23% Similarity=0.328 Sum_probs=171.1
Q ss_pred eEEEEEEEEEecCC----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------
Q 007982 366 VLQFVEVTFGYTPD----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------ 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------ 429 (582)
.|+++||++.|++. +++|+||||+|.+||++||+||||||||||+++|+|+++|++|+|...+.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 38899999999642 36999999999999999999999999999999999999999999977541
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCC-ccccCCCCCCChhHHHHHHHHHHHc
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTG-KAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~-~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
..++|++|.+...+ +..++.+++... .... ..+++.++++.+||.. ...++++.+|||||||||+|||||+
T Consensus 82 ~~~ig~v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAraL~ 160 (287)
T PRK13637 82 RKKVGLVFQYPEYQL-FEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAGVVA 160 (287)
T ss_pred hhceEEEecCchhcc-ccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHHHHH
Confidence 24789999753222 345777776421 1111 2346788999999962 2334667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||||++|++|+++ .+|+.+++..
T Consensus 161 ~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~-~~g~~~~~~~ 234 (287)
T PRK13637 161 MEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCE-LQGTPREVFK 234 (287)
T ss_pred cCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHh
Confidence 999999999999999999999999998764 579999999999999999999999999997 4888888754
No 98
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.1e-42 Score=350.08 Aligned_cols=209 Identities=28% Similarity=0.408 Sum_probs=169.4
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-HHHHHHHHhc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-KLEKEAEILG 150 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~ 150 (582)
.|+++||+|+|++..+++|+||+|++||+++|+||||||||||||+|+|+..|+.|.+. +++..+ .+......++
T Consensus 5 ~l~i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~----l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 5 ALEIRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEIL----LDGEDITDVPPEKRPIG 80 (352)
T ss_pred eEEEEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEE----ECCEECCCCChhhcccc
Confidence 69999999999999999999999999999999999999999999999999999977542 222111 0111111122
Q ss_pred --cccC---CCcchHHHHHHHHHc---CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 151 --AQED---GGGEQLERVYERLEA---LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 151 --~~~~---~~~~~~~~~~~~l~~---~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
+|.. +..++.+++...+.. ....+.++++.++|+.+++++ +.+++|++|||||||||||||||+.+|++||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~-~~~R~p~qLSGGQqQRVALARAL~~~P~vLL 159 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEG-FADRKPHQLSGGQQQRVALARALVPEPKVLL 159 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchh-hhhhChhhhChHHHHHHHHHHHhhcCcchhh
Confidence 2222 334566777666651 234567789999999999986 6789999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHh----hcCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 223 LDEPTNHLDLEACVWLEETLK----KFDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~----~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
||||.|+||..-+..+...|+ +.+.|.|+||||.+++..++|||++|++|+|.. .|+++++..
T Consensus 160 LDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q-~gtP~eiY~ 226 (352)
T COG3842 160 LDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQ-VGTPEEIYE 226 (352)
T ss_pred hcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceee-cCCHHHHhh
Confidence 999999999988887776654 458899999999999999999999999999964 577776543
No 99
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-41 Score=350.67 Aligned_cols=203 Identities=22% Similarity=0.326 Sum_probs=171.9
Q ss_pred eEEEEEEEEEec--C-CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------
Q 007982 366 VLQFVEVTFGYT--P-DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~--~-~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------- 429 (582)
||+++|++++|+ + .+.+|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 80 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKA 80 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHH
Confidence 588999999996 2 357999999999999999999999999999999999999999999987642
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc---C--CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHcc
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE---Y--PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~---~--~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 502 (582)
..++|++|+.. +....++.+++... . +.. ..+++.++++.+||.+... +++.+|||||||||+|||||+.
T Consensus 81 ~~~ig~v~q~~~--l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-~~~~~LSgGq~qRv~lAraL~~ 157 (343)
T PRK11153 81 RRQIGMIFQHFN--LLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKAD-RYPAQLSGGQKQRVAIARALAS 157 (343)
T ss_pred hcCEEEEeCCCc--cCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh-CChhhCCHHHHHHHHHHHHHHc
Confidence 24889998753 44456777776432 1 111 2346788999999986544 5668999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|+++ ..|+..++..
T Consensus 158 ~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~-~~g~~~~~~~ 230 (343)
T PRK11153 158 NPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLV-EQGTVSEVFS 230 (343)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHh
Confidence 99999999999999999999999998775 579999999999999999999999999997 4788877653
No 100
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=5.3e-41 Score=329.49 Aligned_cols=191 Identities=28% Similarity=0.443 Sum_probs=161.3
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------ee
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------------LR 431 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------------~~ 431 (582)
+|+++|+++.|++++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..
T Consensus 1 ~l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 1 MIEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred CEEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 4789999999953467999999999999999999999999999999999999999999987542 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhc-----CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKE-----YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
++|++|... +....++.+++... ... ...+++.++++.+|+.... ++++.+|||||+|||+|||||+.+|+
T Consensus 81 i~~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~ 157 (214)
T TIGR02673 81 IGVVFQDFR--LLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKA-DAFPEQLSGGEQQRVAIARAIVNSPP 157 (214)
T ss_pred eEEEecChh--hccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhCCCC
Confidence 788888753 33446777665431 111 1235678899999998654 35668999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCe
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQA 559 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~ 559 (582)
+|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+
T Consensus 158 lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 158 LLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999998875 6799999999999999999999999885
No 101
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-41 Score=330.74 Aligned_cols=193 Identities=29% Similarity=0.356 Sum_probs=162.9
Q ss_pred EEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------eeEEEech
Q 007982 367 LQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------LRIAQFHQ 437 (582)
Q Consensus 367 l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------~~~~~~~q 437 (582)
|+++|+++.|++. +++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 4689999999642 57999999999999999999999999999999999999999999987652 35889988
Q ss_pred hhhhhcCCcccHHHHHHhc--CCC----ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 438 HLAEKLDMDMSALQYMIKE--YPG----NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
... +....++.+++... ... ...+.+.++++.+|+..... +++.+|||||||||+|||||+.+|++|||||
T Consensus 81 ~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LSgG~~qrl~la~al~~~p~lllLDE 157 (220)
T cd03293 81 QDA--LLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFEN-AYPHQLSGGMRQRVALARALAVDPDVLLLDE 157 (220)
T ss_pred ccc--cccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-CCcccCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 753 33346777665421 111 12356788999999976544 5568999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEe--CCeEEE
Q 007982 512 PTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCE--NQAVTR 562 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~--~G~i~~ 562 (582)
||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|+ +|+++.
T Consensus 158 Pt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~ 214 (220)
T cd03293 158 PFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVA 214 (220)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEE
Confidence 99999999999999998764 5799999999999999999999999 799864
No 102
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=341.40 Aligned_cols=205 Identities=24% Similarity=0.337 Sum_probs=170.7
Q ss_pred eEEEEEEEEEecCC----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------
Q 007982 366 VLQFVEVTFGYTPD----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------ 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------ 429 (582)
+|+++|+++.|++. +.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 58899999999632 46999999999999999999999999999999999999999999987652
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc---CCC---ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE---YPG---NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 500 (582)
..++|++|.+...+. ..++.+++... ... ...+++.++++.+||......+++.+|||||||||+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~laral 160 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLF-ENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIAGVM 160 (287)
T ss_pred HHHhceEEEEeChhhhhc-cchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHHHHH
Confidence 137888887532222 45777776421 111 12346788999999963333567799999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|+.+++..
T Consensus 161 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~ 234 (287)
T PRK13641 161 AYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLI-KHASPKEIFS 234 (287)
T ss_pred HcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999999999998875 469999999999999999999999999996 5788887654
No 103
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=344.35 Aligned_cols=207 Identities=19% Similarity=0.278 Sum_probs=171.2
Q ss_pred CCCeEEEEEEEEEecCC----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------
Q 007982 363 PPPVLQFVEVTFGYTPD----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------- 429 (582)
.+++|+++|++|.|++. .++|+|+||+|.+|+++||+|+||||||||+++|+|+++|++|+|...+.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 35789999999999642 35999999999999999999999999999999999999999999987531
Q ss_pred ------------------eeEEEechhhhhhcCCcccHHHHHHhcC--CC-C---hHHHHHHHHHhcCCCCccccCCCCC
Q 007982 430 ------------------LRIAQFHQHLAEKLDMDMSALQYMIKEY--PG-N---EEEKMRAAIGRFGLTGKAQVMPMKN 485 (582)
Q Consensus 430 ------------------~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~~-~---~~~~~~~~l~~~gl~~~~~~~~~~~ 485 (582)
..++|++|.+...+ +..++.+++.... .. . ...++.++++.+||......+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l-~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~ 176 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQL-FKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFG 176 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhcc-ccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCccc
Confidence 13788888753223 2347777764321 11 1 2345778899999963223456689
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 486 LSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 486 LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++
T Consensus 177 LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~- 255 (320)
T PRK13631 177 LSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKIL- 255 (320)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-
Confidence 9999999999999999999999999999999999999999998764 579999999999999999999999999997
Q ss_pred EcCCHHHHH
Q 007982 563 WEGDIMDFK 571 (582)
Q Consensus 563 ~~g~~~~~~ 571 (582)
.+|+.+++.
T Consensus 256 ~~g~~~~~~ 264 (320)
T PRK13631 256 KTGTPYEIF 264 (320)
T ss_pred EeCCHHHHh
Confidence 478888764
No 104
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7.3e-41 Score=333.45 Aligned_cols=200 Identities=30% Similarity=0.424 Sum_probs=168.6
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEEE
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIAQ 434 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~~ 434 (582)
|+++|+++.|++ +.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (236)
T cd03219 1 LEVRGLTKRFGG-LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGR 79 (236)
T ss_pred CeeeeeEEEECC-EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEE
Confidence 468999999964 67999999999999999999999999999999999999999999987542 23788
Q ss_pred echhhhhhcCCcccHHHHHHhcC---CC-------------ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHH
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEY---PG-------------NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAW 498 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~---~~-------------~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAr 498 (582)
++|.+. +....|+.+++.... .. ...+.+.++++.+|+.... ++++.+|||||||||+|||
T Consensus 80 v~q~~~--l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~ 156 (236)
T cd03219 80 TFQIPR--LFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLA-DRPAGELSYGQQRRLEIAR 156 (236)
T ss_pred Eecccc--cccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchh-hCChhhCCHHHHHHHHHHH
Confidence 888753 344567777654211 00 1234578899999997654 4567899999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 499 LAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 499 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ ..|+++++.
T Consensus 157 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 231 (236)
T cd03219 157 ALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVI-AEGTPDEVR 231 (236)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEE-eecCHHHhc
Confidence 999999999999999999999999999998765 579999999999999999999999999996 578887764
No 105
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.2e-40 Score=350.91 Aligned_cols=205 Identities=23% Similarity=0.346 Sum_probs=176.9
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEE
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIA 433 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~ 433 (582)
..++|+++|+++.|++ ..+|+++||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.+. ..++
T Consensus 11 ~~~~L~l~~l~~~~~~-~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 89 (375)
T PRK09452 11 LSPLVELRGISKSFDG-KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVN 89 (375)
T ss_pred CCceEEEEEEEEEECC-eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 3568999999999964 67999999999999999999999999999999999999999999987653 3589
Q ss_pred EechhhhhhcCCcccHHHHHHhcC-----CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEY-----PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
|++|++. +.+.+++.+++.... +.. ..+++.++++.+||.+...+ ++.+|||||||||+|||||+.+|++|
T Consensus 90 ~vfQ~~~--lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~p~~LSgGq~QRVaLARaL~~~P~ll 166 (375)
T PRK09452 90 TVFQSYA--LFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQR-KPHQLSGGQQQRVAIARAVVNKPKVL 166 (375)
T ss_pred EEecCcc--cCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhC-ChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999864 556778888875432 111 13467889999999876654 55899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||||++||+.++..+.+.|+++ +.|+|+||||.+++..+||+|++|++|++.. .|++.++..
T Consensus 167 LLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~-~g~~~~i~~ 234 (375)
T PRK09452 167 LLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQ-DGTPREIYE 234 (375)
T ss_pred EEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHHh
Confidence 999999999999999998888764 6799999999999999999999999999974 788888765
No 106
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.2e-40 Score=337.93 Aligned_cols=208 Identities=21% Similarity=0.296 Sum_probs=170.1
Q ss_pred CCeEEEEEEEEEecC--------CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------
Q 007982 364 PPVLQFVEVTFGYTP--------DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------ 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~--------~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------ 429 (582)
+++|+++||+++|+. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 2 ~~~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~ 81 (267)
T PRK15112 2 ETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGD 81 (267)
T ss_pred cceEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCc
Confidence 357999999999952 246999999999999999999999999999999999999999999987542
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHh---cC---CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIK---EY---PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~---~~---~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lA 497 (582)
..++|++|.....+....++.+++.. .. .. ...+.+.++++.+|+.....+.++.+|||||+|||+||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~la 161 (267)
T PRK15112 82 YSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLGLA 161 (267)
T ss_pred hhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHHHH
Confidence 24788888753223334455544421 11 11 12346788999999953333456689999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|++. +.|+++++..
T Consensus 162 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 239 (267)
T PRK15112 162 RALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVV-ERGSTADVLA 239 (267)
T ss_pred HHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-ecCCHHHHhc
Confidence 9999999999999999999999999999988764 579999999999999999999999999996 5788877653
No 107
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4.6e-41 Score=329.74 Aligned_cols=191 Identities=30% Similarity=0.452 Sum_probs=161.2
Q ss_pred EEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------eeEEEechhhhh
Q 007982 368 QFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------LRIAQFHQHLAE 441 (582)
Q Consensus 368 ~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------~~~~~~~q~~~~ 441 (582)
+++|++++|++ +.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|++..
T Consensus 1 ~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~~ 79 (213)
T cd03235 1 EVEDLTVSYGG-HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRSI 79 (213)
T ss_pred CcccceeEECC-EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecccccc
Confidence 36899999964 67999999999999999999999999999999999999999999998763 358999997642
Q ss_pred hcCCcccHHHHHHhcCC----------CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 442 KLDMDMSALQYMIKEYP----------GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 442 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
...+..++.+++..... ....+++.++++.+|+.... ++++.+|||||||||+|||||+.+|++|||||
T Consensus 80 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~~p~llllDE 158 (213)
T cd03235 80 DRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELA-DRQIGELSGGQQQRVLLARALVQDPDLLLLDE 158 (213)
T ss_pred ccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHH-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 22234678777653211 11234678899999997544 45678999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeE
Q 007982 512 PTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAV 560 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i 560 (582)
||+|||+.++..+.+.|.++ +.|||+||||++++.++||++++|++|.+
T Consensus 159 Pt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~~~ 210 (213)
T cd03235 159 PFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRTVV 210 (213)
T ss_pred CcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCcEe
Confidence 99999999999999998875 47999999999999999999999988643
No 108
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=351.94 Aligned_cols=202 Identities=24% Similarity=0.294 Sum_probs=173.1
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEec
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFH 436 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~ 436 (582)
.|+++|++++|++ +.+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.+. ..++|++
T Consensus 3 ~l~i~~l~~~~~~-~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~v~ 81 (369)
T PRK11000 3 SVTLRNVTKAYGD-VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGMVF 81 (369)
T ss_pred EEEEEEEEEEeCC-eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEEEe
Confidence 5899999999964 67999999999999999999999999999999999999999999987542 2489999
Q ss_pred hhhhhhcCCcccHHHHHHhcC-----CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 007982 437 QHLAEKLDMDMSALQYMIKEY-----PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLD 510 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 510 (582)
|... +.+..|+.+++.... ... ..+++.++++.+||.+... +++.+|||||||||+|||||+.+|++||||
T Consensus 82 Q~~~--l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~-~~~~~LSgGq~QRvaLAraL~~~P~lLLLD 158 (369)
T PRK11000 82 QSYA--LYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLD-RKPKALSGGQRQRVAIGRTLVAEPSVFLLD 158 (369)
T ss_pred CCcc--cCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhc-CChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9853 445678888775321 111 2356888999999986554 556899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 511 EPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 511 EPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|++. ..|+++++..
T Consensus 159 EPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~-~~g~~~~i~~ 223 (369)
T PRK11000 159 EPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVA-QVGKPLELYH 223 (369)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHh
Confidence 999999999999998888764 679999999999999999999999999997 4788888754
No 109
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=335.00 Aligned_cols=205 Identities=22% Similarity=0.350 Sum_probs=172.4
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------------- 429 (582)
...|+++|+++.|++ +.+|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+.+.
T Consensus 3 ~~~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (257)
T PRK10619 3 ENKLNVIDLHKRYGE-HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKV 81 (257)
T ss_pred CccEEEeeeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccccccc
Confidence 456899999999964 67999999999999999999999999999999999999999999976542
Q ss_pred ----------eeEEEechhhhhhcCCcccHHHHHHhc----CC---CChHHHHHHHHHhcCCCCccccCCCCCCChhHHH
Q 007982 430 ----------LRIAQFHQHLAEKLDMDMSALQYMIKE----YP---GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRS 492 (582)
Q Consensus 430 ----------~~~~~~~q~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkq 492 (582)
..++|++|... +....++.+++... .. .....++.++++.+|+.......++.+|||||||
T Consensus 82 ~~~~~~~~~~~~i~~v~q~~~--l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~q 159 (257)
T PRK10619 82 ADKNQLRLLRTRLTMVFQHFN--LWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQ 159 (257)
T ss_pred ccchHHHHHhhceEEEecCcc--cCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHH
Confidence 23788888753 33346777776421 11 1123567889999999865434567899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHH
Q 007982 493 RVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMD 569 (582)
Q Consensus 493 rv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 569 (582)
||+|||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|++++
T Consensus 160 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~ 238 (257)
T PRK10619 160 RVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIE-EEGAPEQ 238 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHH
Confidence 999999999999999999999999999999999988765 579999999999999999999999999997 5788887
Q ss_pred HHH
Q 007982 570 FKL 572 (582)
Q Consensus 570 ~~~ 572 (582)
+..
T Consensus 239 ~~~ 241 (257)
T PRK10619 239 LFG 241 (257)
T ss_pred hhh
Confidence 753
No 110
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=333.13 Aligned_cols=210 Identities=26% Similarity=0.362 Sum_probs=167.0
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceee--eeechHHHHHHHHHHHHh
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEA--VISCDEERLKLEKEAEIL 149 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~ 149 (582)
+|.++|+++.|+...+++||||+|+.||.++|+|||||||||||++|+|++.|+.|.+.. ..-.+... .......+
T Consensus 2 ~i~i~~~~~~~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~--~~~~~R~V 79 (345)
T COG1118 2 SIRINNVKKRFGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSN--LAVRDRKV 79 (345)
T ss_pred ceeehhhhhhcccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhc--cchhhcce
Confidence 689999999999999999999999999999999999999999999999999998765421 11112222 12222334
Q ss_pred ccccC-----CCcchHHHHHHHHH----cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCc
Q 007982 150 GAQED-----GGGEQLERVYERLE----ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTI 220 (582)
Q Consensus 150 ~~~~~-----~~~~~~~~~~~~l~----~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~l 220 (582)
++.++ ...++.+++.+.+. ..+....+.++.++|+.+.|+. +.+++|.+|||||||||||||||+.+|++
T Consensus 80 GfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~-la~ryP~QLSGGQrQRVALARALA~eP~v 158 (345)
T COG1118 80 GFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEG-LADRYPAQLSGGQRQRVALARALAVEPKV 158 (345)
T ss_pred eEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccc-hhhcCchhcChHHHHHHHHHHHhhcCCCe
Confidence 43222 12344555555442 2345677889999999999975 68999999999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHH----hhcCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 221 LLLDEPTNHLDLEACVWLEETL----KKFDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 221 LlLDEPt~~LD~~~~~~l~~~l----~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||||+++||...+..|...| .+++.|+|+||||++++.++||||++|++|+|.. .|+++++.
T Consensus 159 LLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieq-vg~p~ev~ 226 (345)
T COG1118 159 LLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQ-VGPPDEVY 226 (345)
T ss_pred EeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeee-eCCHHHHh
Confidence 9999999999998876665555 4568899999999999999999999999999964 56766654
No 111
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=340.24 Aligned_cols=205 Identities=20% Similarity=0.313 Sum_probs=170.6
Q ss_pred eEEEEEEEEEecCC----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------
Q 007982 366 VLQFVEVTFGYTPD----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------ 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------ 429 (582)
.|+++|++++|++. +++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 48999999999632 36999999999999999999999999999999999999999999987652
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc-----CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE-----YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 500 (582)
..++|++|.+...+ +..++.+++... ... ...+.+.++++.+||.....++++.+|||||+|||+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l-~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~laraL 160 (286)
T PRK13646 82 PVRKRIGMVFQFPESQL-FEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIVSIL 160 (286)
T ss_pred HHHhheEEEecChHhcc-chhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 14789999753333 234777776431 111 12346788999999963333456789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|++.++..
T Consensus 161 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 235 (286)
T PRK13646 161 AMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIV-SQTSPKELFK 235 (286)
T ss_pred HhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EECCHHHHHh
Confidence 9999999999999999999999999998764 579999999999999999999999999997 5888887654
No 112
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=7.6e-41 Score=329.32 Aligned_cols=190 Identities=30% Similarity=0.410 Sum_probs=159.7
Q ss_pred EEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------
Q 007982 367 LQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------------- 429 (582)
Q Consensus 367 l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------------- 429 (582)
|+++|++++|++. +++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 4789999999642 57999999999999999999999999999999999999999999986541
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc--CCCC----hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHcc
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE--YPGN----EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 502 (582)
..++|++|... +....++.+++... +... ..+.+.++++.+|+.... ++++.+|||||||||+|||||+.
T Consensus 81 ~~~i~~~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~ 157 (218)
T cd03255 81 RRHIGFVFQSFN--LLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRL-NHYPSELSGGQQQRVAIARALAN 157 (218)
T ss_pred hhcEEEEeeccc--cCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhh-hcChhhcCHHHHHHHHHHHHHcc
Confidence 24788888753 33445777765431 1111 234678899999998655 45668999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeE
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAV 560 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i 560 (582)
+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++. +||++++|++|++
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 158 DPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 99999999999999999999999998765 569999999999997 9999999999974
No 113
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.9e-40 Score=341.96 Aligned_cols=203 Identities=25% Similarity=0.396 Sum_probs=175.5
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEe
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQF 435 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~ 435 (582)
+++++|++++|+ +..+|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|...+. ..++|+
T Consensus 2 ~l~~~~l~~~~~-~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig~~ 80 (301)
T TIGR03522 2 SIRVSSLTKLYG-TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIGYL 80 (301)
T ss_pred EEEEEEEEEEEC-CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceEEe
Confidence 589999999996 467999999999999999999999999999999999999999999987652 248899
Q ss_pred chhhhhhcCCcccHHHHHHh---cC--CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 007982 436 HQHLAEKLDMDMSALQYMIK---EY--PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLL 509 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~---~~--~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 509 (582)
+|... +....++.+++.. .+ +.. ..+++.++++.||+.+.. ++++..|||||||||+|||||+.+|++|||
T Consensus 81 ~q~~~--l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv~la~al~~~p~lliL 157 (301)
T TIGR03522 81 PEHNP--LYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQ-HKKIGQLSKGYRQRVGLAQALIHDPKVLIL 157 (301)
T ss_pred cCCCC--CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHh-cCchhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 98753 4455678777642 11 111 235688899999998765 456789999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 510 DEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 510 DEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
||||+|||+.++..+.+.|+++ +.|||++||+++++.++||+|++|++|++. +.|+++++...
T Consensus 158 DEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~~ 222 (301)
T TIGR03522 158 DEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIV-ADKKLDELSAA 222 (301)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHHh
Confidence 9999999999999999999887 579999999999999999999999999997 68999998654
No 114
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.9e-40 Score=334.97 Aligned_cols=206 Identities=24% Similarity=0.316 Sum_probs=169.4
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCce-------------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHL------------- 430 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~------------- 430 (582)
.++|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+..
T Consensus 4 ~~~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 4 QPLLSVRGLTKLYGP-RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred CceEEEeeeEEEcCC-ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 357999999999964 679999999999999999999999999999999999999999999775531
Q ss_pred -------eEEEechhhhhhcCCcccHHHHHHhc---CC----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHH
Q 007982 431 -------RIAQFHQHLAEKLDMDMSALQYMIKE---YP----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 431 -------~~~~~~q~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~l 496 (582)
.++|++|.....+....++.+++... +. ......+.++++.+++.....++++.+|||||+|||+|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl~l 162 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRLQI 162 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHHHH
Confidence 37888887643344444444443211 11 11234577889999996423345678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
||||+.+|+||||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ ..|+++++.
T Consensus 163 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~ 240 (258)
T PRK11701 163 ARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVV-ESGLTDQVL 240 (258)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHh
Confidence 99999999999999999999999999999988653 679999999999999999999999999997 478877764
No 115
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2e-40 Score=347.51 Aligned_cols=202 Identities=24% Similarity=0.324 Sum_probs=174.2
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEec
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFH 436 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~ 436 (582)
+|+++|++++|++ ..+|+|+||+|.+||+++|+|||||||||||++|+|+++|++|+|.+.+. ..++|++
T Consensus 2 ~L~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~v~ 80 (353)
T PRK10851 2 SIEIANIKKSFGR-TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVF 80 (353)
T ss_pred EEEEEEEEEEeCC-eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEEEe
Confidence 5899999999964 67999999999999999999999999999999999999999999987652 3589999
Q ss_pred hhhhhhcCCcccHHHHHHhcCC------CC----hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 437 QHLAEKLDMDMSALQYMIKEYP------GN----EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
|++. +.+..++.+++..... .. ..+++.++++.++|.+... +++.+|||||||||+|||||+.+|++
T Consensus 81 Q~~~--l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-~~~~~LSgGq~QRvalArAL~~~P~l 157 (353)
T PRK10851 81 QHYA--LFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLAD-RYPAQLSGGQKQRVALARALAVEPQI 157 (353)
T ss_pred cCcc--cCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhh-CChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9853 4556788887753211 11 2356888999999987654 45689999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|+++ ..|+++++..
T Consensus 158 lLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~-~~g~~~~i~~ 226 (353)
T PRK10851 158 LLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIE-QAGTPDQVWR 226 (353)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHh
Confidence 9999999999999999998888764 579999999999999999999999999997 4788888764
No 116
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2e-40 Score=336.02 Aligned_cols=206 Identities=22% Similarity=0.356 Sum_probs=171.5
Q ss_pred eEEEEEEEEEecC--------CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------
Q 007982 366 VLQFVEVTFGYTP--------DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~--------~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------- 429 (582)
+|+++|+++.|++ ++.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 6899999999963 357999999999999999999999999999999999999999999987542
Q ss_pred ------eeEEEechhhhhhcCCcccHHHHHHhc------CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHH
Q 007982 430 ------LRIAQFHQHLAEKLDMDMSALQYMIKE------YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 ------~~~~~~~q~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|.....+....++.+++... +.. ...+++.++++.+|+.....+.++.+|||||+|||+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~qrv~l 161 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQRINI 161 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHHHHHH
Confidence 148888887532344456776665311 111 1245678899999996333345678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++..
T Consensus 162 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 240 (265)
T TIGR02769 162 ARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIV-EECDVAQLLS 240 (265)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEE-EECCHHHHcC
Confidence 99999999999999999999999999999988764 579999999999999999999999999997 5788887753
No 117
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-40 Score=337.69 Aligned_cols=206 Identities=24% Similarity=0.377 Sum_probs=174.0
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------e
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------------L 430 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------------~ 430 (582)
+++|+++|+++.|++++.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.+.+. .
T Consensus 3 ~~~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 3 DYILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred CceEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 468999999999964467999999999999999999999999999999999999999999987652 2
Q ss_pred eEEEechhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCC
Q 007982 431 RIAQFHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 431 ~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 504 (582)
.++|++|.+...+ +..++.+++... ++.. ..+.+.++++.+||.+.. ++++.+|||||+|||+|||||+.+|
T Consensus 83 ~ig~v~q~~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-~~~~~~LS~G~~qrl~laraL~~~p 160 (283)
T PRK13636 83 SVGMVFQDPDNQL-FSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-DKPTHCLSFGQKKRVAIAGVLVMEP 160 (283)
T ss_pred hEEEEecCcchhh-ccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-hCCcccCCHHHHHHHHHHHHHHcCC
Confidence 3789888753222 345777776431 1111 235678899999998654 4667999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++|||||||+|||+.++..+.+.|+++ +.|||++|||++++..+|||+++|++|+++ +.|+++++..
T Consensus 161 ~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 231 (283)
T PRK13636 161 KVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVI-LQGNPKEVFA 231 (283)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 999999999999999999998888764 579999999999999999999999999996 5898888754
No 118
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.6e-40 Score=328.02 Aligned_cols=194 Identities=27% Similarity=0.378 Sum_probs=163.4
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------ee
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------------LR 431 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------------~~ 431 (582)
+|+++|+++.|++++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 1 MIRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred CEEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 4789999999943467999999999999999999999999999999999999999999987542 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhc--CCC-C---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKE--YPG-N---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~--~~~-~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
++|++|... +.+..++.+++... ... . ..+.+.++++.+|+.+... +++.+|||||||||+||||++.+|+
T Consensus 81 i~~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~qrv~laral~~~p~ 157 (222)
T PRK10908 81 IGMIFQDHH--LLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAK-NFPIQLSGGEQQRVGIARAVVNKPA 157 (222)
T ss_pred eEEEecCcc--ccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-CCchhCCHHHHHHHHHHHHHHcCCC
Confidence 788888753 33456777766431 111 1 1335678999999986544 5668999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
+|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 158 VLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999988865 5799999999999999999999999999863
No 119
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=335.26 Aligned_cols=206 Identities=23% Similarity=0.312 Sum_probs=173.3
Q ss_pred CCCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------e
Q 007982 362 LPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------L 430 (582)
Q Consensus 362 ~~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~ 430 (582)
..+++|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. .
T Consensus 7 ~~~~~l~i~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (265)
T PRK10575 7 HSDTTFALRNVSFRVPG-RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFAR 85 (265)
T ss_pred CCCceEEEeeEEEEECC-EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhh
Confidence 45678999999999964 67999999999999999999999999999999999999999999987652 1
Q ss_pred eEEEechhhhhhcCCcccHHHHHHhcC----------CCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHH
Q 007982 431 RIAQFHQHLAEKLDMDMSALQYMIKEY----------PGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 431 ~~~~~~q~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 500 (582)
.++|++|... +....++.+++.... .....+++.++++.+++.+.. ++++.+|||||+|||+|||||
T Consensus 86 ~i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~laral 162 (265)
T PRK10575 86 KVAYLPQQLP--AAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLA-HRLVDSLSGGERQRAWIAMLV 162 (265)
T ss_pred heEEeccCCC--CCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHh-cCCcccCCHHHHHHHHHHHHH
Confidence 4788888743 334557777764321 011234678899999997644 456689999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+.+|+||||||||+|||+.++..+.+.|.++ +.|||+||||++++.++||+|++|++|+++ ..|+.+++..
T Consensus 163 ~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~-~~~~~~~~~~ 237 (265)
T PRK10575 163 AQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMI-AQGTPAELMR 237 (265)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EecCHHHhcC
Confidence 9999999999999999999999999888764 579999999999999999999999999996 5788877654
No 120
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=2.7e-40 Score=327.59 Aligned_cols=197 Identities=22% Similarity=0.337 Sum_probs=161.7
Q ss_pred eEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------
Q 007982 366 VLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------- 429 (582)
+|+++|+++.|++. .++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIR 80 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHh
Confidence 47899999999643 27999999999999999999999999999999999999999999986542
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc---C-CCCh---HHH-HHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHH
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE---Y-PGNE---EEK-MRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~---~-~~~~---~~~-~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 500 (582)
..++|++|.....+....++.+++... . .... ... +.++++.+++.....+.++.+|||||+|||+|||||
T Consensus 81 ~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral 160 (228)
T cd03257 81 RKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIARAL 160 (228)
T ss_pred hccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHHHHHH
Confidence 247888887632344456777765321 1 1111 122 247889999953233456789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 226 (228)
T cd03257 161 ALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVE 226 (228)
T ss_pred hcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEe
Confidence 9999999999999999999999999998765 5799999999999999999999999999863
No 121
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.4e-40 Score=332.24 Aligned_cols=203 Identities=26% Similarity=0.473 Sum_probs=170.2
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcC
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLD 444 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~ 444 (582)
++|+++|+++.|++ +.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+...++|++|.+.....
T Consensus 3 ~~l~~~~l~~~~~~-~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~~~~i~~v~q~~~~~~~ 81 (251)
T PRK09544 3 SLVSLENVSVSFGQ-RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNGKLRIGYVPQKLYLDTT 81 (251)
T ss_pred cEEEEeceEEEECC-ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCccCEEEeccccccccc
Confidence 58999999999964 57999999999999999999999999999999999999999999998876679999998532212
Q ss_pred CcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHH
Q 007982 445 MDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSL 524 (582)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l 524 (582)
+..++.+++.. .+....+++.++++.+|+.+.. ++++.+|||||+|||+|||||+.+|++|||||||+|||+.++..+
T Consensus 82 l~~~~~~~~~~-~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l 159 (251)
T PRK09544 82 LPLTVNRFLRL-RPGTKKEDILPALKRVQAGHLI-DAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVAL 159 (251)
T ss_pred cChhHHHHHhc-cccccHHHHHHHHHHcCChHHH-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHH
Confidence 22345554422 2222345678899999998654 456789999999999999999999999999999999999999999
Q ss_pred HHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 525 AEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 525 ~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
.+.|.++ +.|||+||||++++..+||+|++|++ +++ ..|+++++..
T Consensus 160 ~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~-~~g~~~~~~~ 209 (251)
T PRK09544 160 YDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HIC-CSGTPEVVSL 209 (251)
T ss_pred HHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceE-eeCCHHHHhC
Confidence 9988654 67999999999999999999999965 665 5788877643
No 122
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.8e-40 Score=348.38 Aligned_cols=203 Identities=22% Similarity=0.305 Sum_probs=175.0
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCC--cEEEEcCc---------eeEEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLD--GMVRRHNH---------LRIAQ 434 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~--G~i~~~~~---------~~~~~ 434 (582)
-|+++|++++|++ ..+|+|+||+|.+|++++|+|||||||||||++|+|+++|++ |+|...+. ..++|
T Consensus 5 ~l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ig~ 83 (362)
T TIGR03258 5 GIRIDHLRVAYGA-NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRGLAL 83 (362)
T ss_pred EEEEEEEEEEECC-eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCCEEE
Confidence 3789999999964 679999999999999999999999999999999999999999 99987652 35899
Q ss_pred echhhhhhcCCcccHHHHHHhcC-----CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEY-----PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLL 508 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 508 (582)
++|++. +.+.+|+.+++.... +.. ..+++.++++.+||.+... +++.+|||||||||+|||||+.+|++||
T Consensus 84 vfQ~~~--l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~-~~~~~LSgGq~QRvaLARAL~~~P~llL 160 (362)
T TIGR03258 84 LFQNYA--LFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAA-HLPAQLSGGMQQRIAIARAIAIEPDVLL 160 (362)
T ss_pred EECCcc--cCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhh-CChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999864 556778888875321 111 2356889999999987655 4568999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc-----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 509 LDEPTNHLDIETIDSLAEALNEW-----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 509 LDEPt~~LD~~~~~~l~~~l~~~-----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
|||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|++. ..|+++++...
T Consensus 161 LDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~-~~g~~~~~~~~ 229 (362)
T TIGR03258 161 LDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLA-AHGEPQALYDA 229 (362)
T ss_pred EcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHHhC
Confidence 99999999999999999887653 569999999999999999999999999997 47898888654
No 123
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.5e-40 Score=329.31 Aligned_cols=198 Identities=24% Similarity=0.306 Sum_probs=165.8
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCC-----CCCCcEEEEcCc------------
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDL-----VPLDGMVRRHNH------------ 429 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~-----~p~~G~i~~~~~------------ 429 (582)
|+++|++++|++ +++|+|+||+|.+|++++|+||||||||||+++|+|++ +|++|+|.+.+.
T Consensus 1 i~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (227)
T cd03260 1 IELRDLNVYYGD-KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLEL 79 (227)
T ss_pred CEEEEEEEEcCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHH
Confidence 478999999964 57999999999999999999999999999999999999 999999987542
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc---CC--CC--hHHHHHHHHHhcCCCCccccCC-CCCCChhHHHHHHHHHHH
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE---YP--GN--EEEKMRAAIGRFGLTGKAQVMP-MKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~--~~--~~~~~~~~l~~~gl~~~~~~~~-~~~LSgGqkqrv~lAral 500 (582)
..++|++|... +. ..|+.+++... .. .. ..+++.++++.+|+.......+ +.+|||||||||+|||||
T Consensus 80 ~~~i~~~~q~~~--~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~la~al 156 (227)
T cd03260 80 RRRVGMVFQKPN--PF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLHALGLSGGQQQRLCLARAL 156 (227)
T ss_pred HhhEEEEecCch--hc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCCcccCCHHHHHHHHHHHHH
Confidence 14788888753 22 56777776421 11 11 2356788999999986544443 589999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHH
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEWD--GGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMD 569 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 569 (582)
+.+|++|||||||++||+.++..+.+.|+++. .|||+||||++++..+||++++|++|+++. .|++++
T Consensus 157 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~ 226 (227)
T cd03260 157 ANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVE-FGPTEQ 226 (227)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEE-ecCccc
Confidence 99999999999999999999999999998763 589999999999999999999999999974 666543
No 124
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.9e-40 Score=325.40 Aligned_cols=192 Identities=24% Similarity=0.327 Sum_probs=162.9
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEech
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFHQ 437 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~q 437 (582)
|+++|+++.|++ +++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|
T Consensus 1 i~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~~q 79 (213)
T cd03301 1 VELENVTKRFGN-VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMVFQ 79 (213)
T ss_pred CEEEeeEEEECC-eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEEec
Confidence 478999999964 57999999999999999999999999999999999999999999987542 24788888
Q ss_pred hhhhhcCCcccHHHHHHhc--CCC----ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 438 HLAEKLDMDMSALQYMIKE--YPG----NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
... +....++.+++... ... ...+++.++++.+|+.... ++++.+|||||||||+|||||+.+|++|||||
T Consensus 80 ~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qr~~laral~~~p~llllDE 156 (213)
T cd03301 80 NYA--LYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLL-DRKPKQLSGGQRQRVALGRAIVREPKVFLMDE 156 (213)
T ss_pred Chh--hccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHH-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 753 33456777765421 111 1234577889999997654 45678999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 512 PTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 157 Pt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~ 211 (213)
T cd03301 157 PLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQ 211 (213)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEe
Confidence 99999999999999998764 5799999999999999999999999999974
No 125
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.5e-41 Score=343.98 Aligned_cols=208 Identities=27% Similarity=0.415 Sum_probs=169.2
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-HHHHHHHHhc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-KLEKEAEILG 150 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~ 150 (582)
.|+++||+|.|++..+++++||+|+.||+++|+||||||||||||+|+|++.++.|.+. +++... .+......++
T Consensus 3 ~i~l~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~----i~g~~vt~l~P~~R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEIL----IDGRDVTDLPPEKRGIA 78 (338)
T ss_pred EEEEeeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE----ECCEECCCCChhHCCEE
Confidence 69999999999987699999999999999999999999999999999999999876542 222111 0111112232
Q ss_pred --cccC---CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceee
Q 007982 151 --AQED---GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLL 223 (582)
Q Consensus 151 --~~~~---~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlL 223 (582)
+|.. +..++++++...+. ..+.++.++++.++.+.+++++ +++++|.+|||||||||||||||+.+|+++||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~-lL~r~P~~LSGGQrQRVAlaRAlVr~P~v~L~ 157 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEH-LLNRKPLQLSGGQRQRVALARALVRKPKVFLL 157 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChh-HHhcCcccCChhhHHHHHHHHHHhcCCCEEEe
Confidence 2222 23455666665554 4567888999999999999975 67899999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHhh----cCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 224 DEPTNHLDLEACVWLEETLKK----FDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 224 DEPt~~LD~~~~~~l~~~l~~----~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||+|+||...+..+...|++ ++.|+|+||||..++..++|||++|++|+|.. .|++.+..
T Consensus 158 DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q-~g~p~ely 222 (338)
T COG3839 158 DEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ-VGTPLELY 222 (338)
T ss_pred cCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee-cCChHHHh
Confidence 999999999988887777655 57899999999999999999999999999975 46665543
No 126
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.6e-40 Score=327.40 Aligned_cols=200 Identities=25% Similarity=0.334 Sum_probs=167.0
Q ss_pred EEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEe
Q 007982 367 LQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQF 435 (582)
Q Consensus 367 l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~ 435 (582)
|+++|+++.|++. +++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~v 80 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGYC 80 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEEe
Confidence 4789999999642 57999999999999999999999999999999999999999999987653 237888
Q ss_pred chhhhhhcCCcccHHHHHHhc---C--CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 007982 436 HQHLAEKLDMDMSALQYMIKE---Y--PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLL 509 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~---~--~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 509 (582)
+|... +....++.+++... . +.. ..+++.++++.+|+.... +.++.+|||||+|||+|||||+.+|++|||
T Consensus 81 ~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~llll 157 (220)
T cd03263 81 PQFDA--LFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-NKRARTLSGGMKRKLSLAIALIGGPSVLLL 157 (220)
T ss_pred cCcCC--ccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-hChhhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 88742 33355677665421 1 111 234678899999997554 356789999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 510 DEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 510 DEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
||||++||+.++..+.+.|+++ +.|||++|||++++.++||++++|++|+++ ..|+.+++
T Consensus 158 DEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~ 219 (220)
T cd03263 158 DEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLR-CIGSPQEL 219 (220)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEE-ecCCHHHc
Confidence 9999999999999999999876 369999999999999999999999999997 46776653
No 127
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-40 Score=336.89 Aligned_cols=205 Identities=25% Similarity=0.410 Sum_probs=171.7
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
++|+++|++++|++...+|+|+||+|.+||+++|+|+||||||||+++|+|+++|++|+|.+.+. ..++
T Consensus 2 ~~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 2 HLIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred ceEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 46899999999964456999999999999999999999999999999999999999999987552 1478
Q ss_pred EechhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
|++|.+...+ +..++.+++... .... ..+.+.++++.+|+..... +++.+|||||||||+|||||+.+|++|
T Consensus 82 ~v~q~~~~~~-~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~Gq~qrl~laraL~~~p~ll 159 (277)
T PRK13652 82 LVFQNPDDQI-FSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRD-RVPHHLSGGEKKRVAIAGVIAMEPQVL 159 (277)
T ss_pred EEecCccccc-ccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhc-CCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 8888753222 245777766421 1111 1345788999999986544 556899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||||+|||+.++..+.+.|+++ +.|||++|||++++.++||+|++|++|+++ +.|+++++..
T Consensus 160 ilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~-~~g~~~~~~~ 227 (277)
T PRK13652 160 VLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIV-AYGTVEEIFL 227 (277)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEE-EECCHHHHhc
Confidence 999999999999999999988764 579999999999999999999999999997 5789888754
No 128
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.2e-40 Score=341.72 Aligned_cols=208 Identities=24% Similarity=0.342 Sum_probs=164.5
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH--HHHHHHH
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK--LEKEAEI 148 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~ 148 (582)
.+|+++||+|+|+++.+|+|+||+|++|+++||+||||||||||+++|+|+.+|+.|.+. +++.... .......
T Consensus 6 ~~i~i~~l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~----i~G~~~~~~~~~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSIS----LCGEPVPSRARHARQR 81 (306)
T ss_pred ceEEEEeEEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEE----ECCEecccchHHHHhc
Confidence 479999999999999999999999999999999999999999999999999988866432 2221110 0111222
Q ss_pred hcc--ccCC---CcchHHHHH--HHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 149 LGA--QEDG---GGEQLERVY--ERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~--~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
+++ +... .....+++. ..+...+..+...++.++++.+++.. ..+++++.|||||||||+||+||+.+|++|
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrl~la~aL~~~P~ll 160 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLEN-KADAKVGELSGGMKRRLTLARALVNDPDVL 160 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-HhcCchhhCCHHHHHHHHHHHHHhCCCCEE
Confidence 332 2211 122333332 22223344455677889999999975 568899999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 222 LLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
||||||+|||+.++.++.++|+++ +.|||++||+++++..+||||++|++|+++ +.|+++++
T Consensus 161 lLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~-~~g~~~~l 225 (306)
T PRK13537 161 VLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKI-AEGAPHAL 225 (306)
T ss_pred EEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EECCHHHH
Confidence 999999999999999999999876 579999999999999999999999999997 45776654
No 129
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-40 Score=329.39 Aligned_cols=202 Identities=26% Similarity=0.351 Sum_probs=169.1
Q ss_pred eEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------
Q 007982 366 VLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------- 429 (582)
+|+++|++++|++. .++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 47899999999643 17999999999999999999999999999999999999999999987542
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc---CCCC---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHcc
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE---YPGN---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 502 (582)
..++|++|... +....++.+++... .... ....+.++++.+|+..... +++.+|||||+|||+|||||+.
T Consensus 81 ~~~i~~~~q~~~--~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~qrv~la~al~~ 157 (233)
T cd03258 81 RRRIGMIFQHFN--LLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKAD-AYPAQLSGGQKQRVGIARALAN 157 (233)
T ss_pred HhheEEEccCcc--cCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhh-cChhhCCHHHHHHHHHHHHHhc
Confidence 23778888753 33446777765421 1111 2346788999999976544 5668999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|+.+++.
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 229 (233)
T cd03258 158 NPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVV-EEGTVEEVF 229 (233)
T ss_pred CCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecCHHHHh
Confidence 99999999999999999999999998764 569999999999999999999999999997 578877654
No 130
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.8e-40 Score=339.52 Aligned_cols=207 Identities=26% Similarity=0.392 Sum_probs=164.0
Q ss_pred ceEEeeeEEEEC-CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH--HHHHHHH
Q 007982 72 DIRIESLSVTFH-GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK--LEKEAEI 148 (582)
Q Consensus 72 ~i~v~nls~~y~-~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~ 148 (582)
.++++||+++|+ ++.+|+||||+|++|+++||+||||||||||+|+|+|+..|+.|.+ .+.+.... .......
T Consensus 4 ~i~~~~l~k~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i----~i~G~~~~~~~~~~~~~ 79 (293)
T COG1131 4 VIEVRNLTKKYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEI----LVLGYDVVKEPAKVRRR 79 (293)
T ss_pred eeeecceEEEeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEE----EEcCEeCccCHHHHHhh
Confidence 688999999999 6999999999999999999999999999999999999999876543 22221110 1112223
Q ss_pred hccccC-----CCcchHH--HHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 149 LGAQED-----GGGEQLE--RVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 149 ~~~~~~-----~~~~~~~--~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
+++.+. +..+..+ .++..+........++++.++++.+||.+ ..++++++||+||||||+||+||+.+|++|
T Consensus 80 igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~lS~G~kqrl~ia~aL~~~P~ll 158 (293)
T COG1131 80 IGYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLED-KANKKVRTLSGGMKQRLSIALALLHDPELL 158 (293)
T ss_pred eEEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCch-hhCcchhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 332211 1122222 23334444333455678999999999986 347889999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhhc---C-cEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 222 LLDEPTNHLDLEACVWLEETLKKF---D-RILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~~---~-~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
||||||+||||.++..+.++|+++ + .|||++||.++++..+||+|++|++|+++.+ |+.+++
T Consensus 159 iLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~-g~~~~l 224 (293)
T COG1131 159 ILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAE-GTPEEL 224 (293)
T ss_pred EECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEe-CCHHHH
Confidence 999999999999999999999876 3 6999999999999999999999999999865 566654
No 131
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-40 Score=328.73 Aligned_cols=201 Identities=23% Similarity=0.340 Sum_probs=168.4
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
.|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~ 81 (241)
T PRK14250 3 EIEFKEVSYSSFG-KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGM 81 (241)
T ss_pred eEEEEeEEEEeCC-eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEE
Confidence 5899999999964 57999999999999999999999999999999999999999999987652 24788
Q ss_pred echhhhhhcCCcccHHHHHHhc--CCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKE--YPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEP 512 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 512 (582)
++|... +. ..++.+++... .......++.++++.+|+.....++++.+|||||+|||+||||++.+|++||||||
T Consensus 82 ~~q~~~--~~-~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEP 158 (241)
T PRK14250 82 VFQQPH--LF-EGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEP 158 (241)
T ss_pred EecCch--hc-hhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 888753 22 24677765421 11123456788999999963333456789999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 513 TNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 513 t~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++. .|++.++.
T Consensus 159 t~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 220 (241)
T PRK14250 159 TSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVE-YAKTYDFF 220 (241)
T ss_pred cccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEE-eCCHHHHh
Confidence 9999999999999988764 6799999999999999999999999999974 67776654
No 132
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-40 Score=344.61 Aligned_cols=207 Identities=20% Similarity=0.271 Sum_probs=171.1
Q ss_pred CeEEEEEEEEEec---CCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC----CCCcEEEEcCc--------
Q 007982 365 PVLQFVEVTFGYT---PDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV----PLDGMVRRHNH-------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~---~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~----p~~G~i~~~~~-------- 429 (582)
++|+++|++++|+ +...+|+||||+|.+||+++|+|+||||||||+++|+|+++ |++|+|.+.+.
T Consensus 2 ~~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (330)
T PRK15093 2 PLLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPR 81 (330)
T ss_pred CeEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHH
Confidence 4799999999995 23469999999999999999999999999999999999996 58999987652
Q ss_pred -------eeEEEechhhhhhcCCcccHHHHHHhc-----CC-----C--ChHHHHHHHHHhcCCCCc--cccCCCCCCCh
Q 007982 430 -------LRIAQFHQHLAEKLDMDMSALQYMIKE-----YP-----G--NEEEKMRAAIGRFGLTGK--AQVMPMKNLSD 488 (582)
Q Consensus 430 -------~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~-----~--~~~~~~~~~l~~~gl~~~--~~~~~~~~LSg 488 (582)
..++|++|.....+.+..++.+.+... +. . ...+++.++|+.+||.+. ..+..+.+|||
T Consensus 82 ~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSg 161 (330)
T PRK15093 82 ERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTE 161 (330)
T ss_pred HHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCH
Confidence 148899998754455556665554321 10 1 123568899999999752 12345589999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEc
Q 007982 489 GQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWE 564 (582)
Q Consensus 489 Gqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~ 564 (582)
||+|||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++.++||+|++|++|+|++ .
T Consensus 162 G~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive-~ 240 (330)
T PRK15093 162 GECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVE-T 240 (330)
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-E
Confidence 9999999999999999999999999999999999999988764 6799999999999999999999999999975 7
Q ss_pred CCHHHHHH
Q 007982 565 GDIMDFKL 572 (582)
Q Consensus 565 g~~~~~~~ 572 (582)
|+.+++..
T Consensus 241 g~~~~i~~ 248 (330)
T PRK15093 241 APSKELVT 248 (330)
T ss_pred CCHHHHHh
Confidence 88877754
No 133
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.8e-40 Score=332.10 Aligned_cols=202 Identities=23% Similarity=0.389 Sum_probs=169.4
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------------
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------------- 429 (582)
+|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (250)
T PRK11264 3 AIEVKNLVKKFHG-QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIR 81 (250)
T ss_pred cEEEeceEEEECC-eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHH
Confidence 6899999999964 57999999999999999999999999999999999999999999976431
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc---CCC-C---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE---YPG-N---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWL 499 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~~-~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAra 499 (582)
..++|++|... +....++.+++... ... . ..+.+.++++.+|+.... +.++.+|||||+|||+||||
T Consensus 82 ~~~~~i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~Gq~qrv~la~a 158 (250)
T PRK11264 82 QLRQHVGFVFQNFN--LFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKE-TSYPRRLSGGQQQRVAIARA 158 (250)
T ss_pred HhhhhEEEEecCcc--cCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-hCChhhCChHHHHHHHHHHH
Confidence 24788888743 33446777765321 111 1 234578889999997654 45678999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 500 AYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 500 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|+.+++..
T Consensus 159 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 233 (250)
T PRK11264 159 LAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIV-EQGPAKALFA 233 (250)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHhc
Confidence 99999999999999999999999999988764 579999999999999999999999999996 5788877653
No 134
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.1e-40 Score=329.38 Aligned_cols=203 Identities=25% Similarity=0.405 Sum_probs=171.9
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~ 432 (582)
++|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..+
T Consensus 1 ~~i~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 1 PILYLEGLSVSFDG-FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred CeEEEEeeEEEcCC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 46899999999964 57999999999999999999999999999999999999999999987652 137
Q ss_pred EEechhhhhhcCCcccHHHHHHhcCC--------------CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHH
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEYP--------------GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAW 498 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAr 498 (582)
+|++|... +....++.+++..... .....++.++++.+|+.... +.++.+|||||+|||+|||
T Consensus 80 ~~~~q~~~--~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 80 GRKFQKPT--VFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEA-DRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eEeccccc--cCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhh-cCChhhCCHHHHHHHHHHH
Confidence 78887642 3345677776543110 01234678899999998654 4567899999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 499 LAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 499 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|++.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|+.+++..
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~-~~~~~~~~~~ 231 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVL-AEGSLDQVQA 231 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEE-eeCCHHHHhc
Confidence 999999999999999999999999999999876 469999999999999999999999999997 5888888754
No 135
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.3e-40 Score=323.54 Aligned_cols=192 Identities=24% Similarity=0.364 Sum_probs=164.5
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEech
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFHQ 437 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~q 437 (582)
|+++|++++|++ +++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (208)
T cd03268 1 LKTNDLTKTYGK-KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGALIE 79 (208)
T ss_pred CEEEEEEEEECC-eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEecC
Confidence 478999999964 67999999999999999999999999999999999999999999988653 24788888
Q ss_pred hhhhhcCCcccHHHHHHhc--CCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCC
Q 007982 438 HLAEKLDMDMSALQYMIKE--YPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNH 515 (582)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~ 515 (582)
... +....++.+++... ......+++.++++.+++..... +++.+|||||||||+||||++.+|++|||||||++
T Consensus 80 ~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~ 156 (208)
T cd03268 80 APG--FYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAK-KKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNG 156 (208)
T ss_pred CCc--cCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHh-hhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCccc
Confidence 743 44456777776432 11223556888999999976544 56689999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 516 LDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 516 LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++.
T Consensus 157 LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~ 206 (208)
T cd03268 157 LDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIE 206 (208)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe
Confidence 9999999999988764 5799999999999999999999999999863
No 136
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-40 Score=330.22 Aligned_cols=202 Identities=25% Similarity=0.327 Sum_probs=168.5
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEEe
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQF 435 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~~ 435 (582)
|+++|++++|++.+.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYV 80 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEE
Confidence 468999999964256999999999999999999999999999999999999999999987542 247888
Q ss_pred chhhhhhcCCcccHHHHHHhc--CCC----ChHHHHHHHHHhcCCCC-ccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 007982 436 HQHLAEKLDMDMSALQYMIKE--YPG----NEEEKMRAAIGRFGLTG-KAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLL 508 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~l~~~gl~~-~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 508 (582)
+|... +....|+.+++... +.. ...+.+.++++.+|+.. ....+++.+|||||+|||+|||||+.+|++||
T Consensus 81 ~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 158 (242)
T cd03295 81 IQQIG--LFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLL 158 (242)
T ss_pred ccCcc--ccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88753 33456777776421 111 12346788999999985 23345678999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 509 LDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 509 LDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++. .|+.+++.
T Consensus 159 lDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 224 (242)
T cd03295 159 MDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQ-VGTPDEIL 224 (242)
T ss_pred ecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecCHHHHH
Confidence 99999999999999999988774 5789999999999999999999999999974 68877764
No 137
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-40 Score=342.80 Aligned_cols=206 Identities=21% Similarity=0.296 Sum_probs=170.3
Q ss_pred eEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC----CCCcEEEEcCc---------
Q 007982 366 VLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV----PLDGMVRRHNH--------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~----p~~G~i~~~~~--------- 429 (582)
+|+++|+++.|+.. ..+|+||||+|.+||++||+|+||||||||+++|+|+++ |++|+|.+.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 68999999999642 369999999999999999999999999999999999997 48999987652
Q ss_pred ------eeEEEechhhhhhcCCcccHHHHHHh----c--CC-CChHHHHHHHHHhcCCCCc--cccCCCCCCChhHHHHH
Q 007982 430 ------LRIAQFHQHLAEKLDMDMSALQYMIK----E--YP-GNEEEKMRAAIGRFGLTGK--AQVMPMKNLSDGQRSRV 494 (582)
Q Consensus 430 ------~~~~~~~q~~~~~~~~~~~~~~~~~~----~--~~-~~~~~~~~~~l~~~gl~~~--~~~~~~~~LSgGqkqrv 494 (582)
..++|++|.....+++..++.+.+.. . .. ....+++.++|+.+||.+. ..+..+.+|||||+|||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv 162 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRV 162 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHH
Confidence 14899999865445555555443321 1 11 1124568899999999742 22345689999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 495 VFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 495 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
+|||||+.+|+||||||||++||+.++..+.++|+++ +.|+|+||||++++.++||||++|.+|+|++ .|+.+++
T Consensus 163 ~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive-~g~~~~~ 241 (326)
T PRK11022 163 MIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE-TGKAHDI 241 (326)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHH
Confidence 9999999999999999999999999999999988764 5799999999999999999999999999986 7888777
Q ss_pred HH
Q 007982 571 KL 572 (582)
Q Consensus 571 ~~ 572 (582)
.+
T Consensus 242 ~~ 243 (326)
T PRK11022 242 FR 243 (326)
T ss_pred hh
Confidence 54
No 138
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.2e-41 Score=308.43 Aligned_cols=204 Identities=23% Similarity=0.325 Sum_probs=164.8
Q ss_pred ceEEeeeEEEEC-CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-ee---chHHHHHHHHHH
Q 007982 72 DIRIESLSVTFH-GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-IS---CDEERLKLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~-~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~---~~~~~~~~~~~~ 146 (582)
||+++||+|.|+ ++.+|+|+||+|++||++.|+||||||||||+|+|.+...|+.|.+... .. .....+.+ ..
T Consensus 1 mI~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~--LR 78 (223)
T COG2884 1 MIRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPF--LR 78 (223)
T ss_pred CeeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccch--hh
Confidence 589999999996 4569999999999999999999999999999999999988886653210 00 11111111 12
Q ss_pred HHhc--cccC---CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCC
Q 007982 147 EILG--AQED---GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPT 219 (582)
Q Consensus 147 ~~~~--~~~~---~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~ 219 (582)
..++ +|+. ....+++++...+. +.+..++++++.++|+.+||.+. .+..|.+|||||||||+||||++.+|+
T Consensus 79 R~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k-~~~lP~~LSGGEQQRvaIARAiV~~P~ 157 (223)
T COG2884 79 RQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHK-ARALPSQLSGGEQQRVAIARAIVNQPA 157 (223)
T ss_pred heeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchh-hhcCccccCchHHHHHHHHHHHccCCC
Confidence 2233 2222 22345666655544 45678899999999999999864 578999999999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEc
Q 007982 220 ILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYT 278 (582)
Q Consensus 220 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~ 278 (582)
+||.||||.+|||.....+++++.++ |.||||.|||.+.++.+--|++.|++|+++.+.
T Consensus 158 vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 158 VLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred eEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 99999999999999999998887665 789999999999999999999999999997643
No 139
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4.5e-40 Score=331.26 Aligned_cols=206 Identities=22% Similarity=0.290 Sum_probs=168.4
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCce--------------
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHL-------------- 430 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~-------------- 430 (582)
++|+++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+..
T Consensus 2 ~~l~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 2 PLLQVSGLSKSYGG-GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred ceEEEeeeEEEeCC-ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 57999999999964 578999999999999999999999999999999999999999999875421
Q ss_pred ------eEEEechhhhhhcCCcccHHHHHHh---cCC----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHH
Q 007982 431 ------RIAQFHQHLAEKLDMDMSALQYMIK---EYP----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 431 ------~~~~~~q~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lA 497 (582)
.++|++|.....+....++.+++.. .+. ....+.+.++++.+|+.....++++..|||||||||+||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~la 160 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQIA 160 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHHHH
Confidence 2678887753223333444444321 011 112356788999999964333456789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+.+++..
T Consensus 161 ral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~-~~~~~~~~~~ 238 (253)
T TIGR02323 161 RNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVV-ESGLTDQVLD 238 (253)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EECCHHHHhc
Confidence 9999999999999999999999999999888653 579999999999999999999999999997 4788777753
No 140
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.9e-40 Score=330.05 Aligned_cols=202 Identities=25% Similarity=0.393 Sum_probs=170.1
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------eeE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------------LRI 432 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------------~~~ 432 (582)
+|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..+
T Consensus 1 ~l~~~~l~~~~~~-~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 1 MIEFKNVSKHFGP-TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred CEEEEeEEEEECC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 4789999999964 67999999999999999999999999999999999999999999987542 147
Q ss_pred EEechhhhhhcCCcccHHHHHHhc---CCC----ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE---YPG----NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
+|++|... +....++.+++... ... ...+.+.++++.+|+.... ++++.+|||||+|||+||||++.+|+
T Consensus 80 ~~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrv~la~al~~~p~ 156 (240)
T PRK09493 80 GMVFQQFY--LFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERA-HHYPSELSGGQQQRVAIARALAVKPK 156 (240)
T ss_pred EEEecccc--cCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHH-hcChhhcCHHHHHHHHHHHHHhcCCC
Confidence 88888753 33456777765421 111 1234578899999997654 45668999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ +.|+..++.+
T Consensus 157 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 225 (240)
T PRK09493 157 LMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIA-EDGDPQVLIK 225 (240)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-eeCCHHHHhc
Confidence 99999999999999999999998765 579999999999999999999999999997 5788887754
No 141
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-40 Score=326.98 Aligned_cols=195 Identities=27% Similarity=0.377 Sum_probs=163.7
Q ss_pred CCeEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------
Q 007982 364 PPVLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------- 429 (582)
.|+|+++|+++.|++. .++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 3 ~~~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 82 (233)
T PRK11629 3 KILLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKA 82 (233)
T ss_pred CceEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHH
Confidence 4689999999999642 46999999999999999999999999999999999999999999987641
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhc-----CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKE-----YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWL 499 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAra 499 (582)
..++|++|... +....++.+++... ... ...+++.++++.+|+.+... +++.+|||||||||+||||
T Consensus 83 ~~~~~~i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~LSgG~~qrl~la~a 159 (233)
T PRK11629 83 ELRNQKLGFIYQFHH--LLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRAN-HRPSELSGGERQRVAIARA 159 (233)
T ss_pred HHHhccEEEEecCcc--cCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhh-CChhhCCHHHHHHHHHHHH
Confidence 24788888753 33445777766431 111 12346788999999986554 4568999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 500 AYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 500 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
++.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+ |++++|++|+++.
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~-~~~~~l~~G~i~~ 225 (233)
T PRK11629 160 LVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRM-SRQLEMRDGRLTA 225 (233)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhh-CEEEEEECCEEEE
Confidence 99999999999999999999999999998764 56999999999999775 6999999999974
No 142
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-40 Score=324.30 Aligned_cols=192 Identities=22% Similarity=0.395 Sum_probs=163.6
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------eeEEEechhh
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------LRIAQFHQHL 439 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------~~~~~~~q~~ 439 (582)
|+++|+++.|+ ++.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|..
T Consensus 1 l~~~~l~~~~~-~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q~~ 79 (210)
T cd03269 1 LEVENVTKRFG-RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPEER 79 (210)
T ss_pred CEEEEEEEEEC-CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEeccCC
Confidence 47899999996 467999999999999999999999999999999999999999999988753 2588898875
Q ss_pred hhhcCCcccHHHHHHhc---C--CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCC
Q 007982 440 AEKLDMDMSALQYMIKE---Y--PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPT 513 (582)
Q Consensus 440 ~~~~~~~~~~~~~~~~~---~--~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt 513 (582)
. +....++.+++... . .. ...+.+.++++.+|+..... +++.+|||||||||+|||||+.+|++|||||||
T Consensus 80 ~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~qrl~la~al~~~p~~lllDEP~ 156 (210)
T cd03269 80 G--LYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYAN-KRVEELSKGNQQKVQFIAAVIHDPELLILDEPF 156 (210)
T ss_pred c--CCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHh-CcHhhCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 3 33446777765321 1 11 12356788999999976544 566899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 514 NHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 514 ~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
+|||+.++..+.+.|+++ +.|||++|||++++..+||++++|++|++..
T Consensus 157 ~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 157 SGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 999999999999998875 5799999999999999999999999999864
No 143
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.4e-40 Score=303.06 Aligned_cols=200 Identities=29% Similarity=0.408 Sum_probs=168.9
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCce---------eEEEec
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHL---------RIAQFH 436 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~---------~~~~~~ 436 (582)
+|.+++|.|+|+. . --.++++|..||++||+||+||||||||++|+|+..|.+|.|..++.. .++.++
T Consensus 1 ~l~L~~V~~~y~~-~--~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSmlF 77 (231)
T COG3840 1 MLALDDVRFSYGH-L--PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSMLF 77 (231)
T ss_pred CccccceEEeeCc-c--eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhhh
Confidence 4678999999963 2 236889999999999999999999999999999999999999987642 244555
Q ss_pred hhhhhhcCCcccHHHHHHhcC-C-----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 007982 437 QHLAEKLDMDMSALQYMIKEY-P-----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLD 510 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 510 (582)
|. .++...+++.+++.... | ..+++++..++.++||.++..+.| .+|||||||||+|||+|+++-+|||||
T Consensus 78 QE--nNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-~~LSGGqRQRvALARclvR~~PilLLD 154 (231)
T COG3840 78 QE--NNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-GELSGGQRQRVALARCLVREQPILLLD 154 (231)
T ss_pred hc--cccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-cccCchHHHHHHHHHHHhccCCeEEec
Confidence 54 23555677777775432 2 225677999999999999877666 799999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 511 EPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 511 EPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||++.|||.-+.++..++.+. +.|++||||.++.+.+++++++++++|+|. |.|+.+++..
T Consensus 155 EPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~-~~g~~~~~~~ 219 (231)
T COG3840 155 EPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIA-AQGSTQELLS 219 (231)
T ss_pred CchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEE-eeccHHHHhc
Confidence 999999999999988887765 569999999999999999999999999995 7999888764
No 144
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.8e-40 Score=343.25 Aligned_cols=208 Identities=27% Similarity=0.436 Sum_probs=164.7
Q ss_pred ceEEeeeEEEECC----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------H
Q 007982 72 DIRIESLSVTFHG----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~ 141 (582)
||+++||+++|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++..+ .
T Consensus 1 mI~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~----i~G~~i~~~~~~~ 76 (343)
T TIGR02314 1 MIKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVI----VDGQDLTTLSNSE 76 (343)
T ss_pred CEEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEE----ECCEECCcCCHHH
Confidence 5899999999952 4799999999999999999999999999999999999998866432 222111 1
Q ss_pred HHHHHHHhcc--ccCC---CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDG---GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARAL 214 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~---~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 214 (582)
+......+++ |... .....+++...+. ..+....++++.++++.+||.+ ..++++.+|||||||||+|||||
T Consensus 77 l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~-~~~~~~~~LSgGqkQRV~IARAL 155 (343)
T TIGR02314 77 LTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGD-KHDSYPSNLSGGQKQRVAIARAL 155 (343)
T ss_pred HHHHhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-hhhCChhhCCHHHHHHHHHHHHH
Confidence 1111222332 2211 1234444433322 3445566778999999999975 57899999999999999999999
Q ss_pred hcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 215 FINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 215 ~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+.+|++|||||||++||+.++..++++|+++ +.|||+|||+++.+..+||+|++|++|+++ ..|+.+++.
T Consensus 156 ~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv-~~g~~~~v~ 229 (343)
T TIGR02314 156 ASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELI-EQGTVSEIF 229 (343)
T ss_pred HhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHH
Confidence 9999999999999999999999999998764 679999999999999999999999999997 457776654
No 145
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=332.46 Aligned_cols=193 Identities=23% Similarity=0.293 Sum_probs=163.6
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------eeEEEechhh
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------LRIAQFHQHL 439 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------~~~~~~~q~~ 439 (582)
+|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|..
T Consensus 1 ml~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~ 79 (255)
T PRK11248 1 MLQISHLYADYGG-KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQNE 79 (255)
T ss_pred CEEEEEEEEEeCC-eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCCC
Confidence 4789999999964 67999999999999999999999999999999999999999999987652 2478888875
Q ss_pred hhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCC
Q 007982 440 AEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPT 513 (582)
Q Consensus 440 ~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt 513 (582)
. +....++.+++... .... ..+++.++++.+|+..... +++.+|||||||||+|||||+.+|++|||||||
T Consensus 80 ~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~LSgGq~qrl~laral~~~p~lllLDEPt 156 (255)
T PRK11248 80 G--LLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEK-RYIWQLSGGQRQRVGIARALAANPQLLLLDEPF 156 (255)
T ss_pred c--cCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhh-CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCC
Confidence 3 33446777765421 1111 2346788999999976544 566899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEe--CCeEEE
Q 007982 514 NHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCE--NQAVTR 562 (582)
Q Consensus 514 ~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~--~G~i~~ 562 (582)
+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|+ +|+++.
T Consensus 157 ~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~ 211 (255)
T PRK11248 157 GALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVE 211 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEE
Confidence 999999999999998775 5799999999999999999999998 599864
No 146
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.8e-40 Score=367.04 Aligned_cols=206 Identities=27% Similarity=0.423 Sum_probs=177.3
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhc
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKL 443 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~ 443 (582)
+++|+++|++++|++++.+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.....++|++|++. +
T Consensus 4 ~~~l~i~~l~~~y~~~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~--~ 81 (556)
T PRK11819 4 QYIYTMNRVSKVVPPKKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQ--L 81 (556)
T ss_pred cEEEEEeeEEEEeCCCCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCC--C
Confidence 56899999999996246799999999999999999999999999999999999999999998876667999999853 3
Q ss_pred CCcccHHHHHHhcC-----------------C-C------------------------ChHHHHHHHHHhcCCCCccccC
Q 007982 444 DMDMSALQYMIKEY-----------------P-G------------------------NEEEKMRAAIGRFGLTGKAQVM 481 (582)
Q Consensus 444 ~~~~~~~~~~~~~~-----------------~-~------------------------~~~~~~~~~l~~~gl~~~~~~~ 481 (582)
....|+.+++.... . . ....++.++++.+|+.. .++
T Consensus 82 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~--~~~ 159 (556)
T PRK11819 82 DPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCPP--WDA 159 (556)
T ss_pred CCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCCc--ccC
Confidence 33456655543110 0 0 01245677899999963 356
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEE
Q 007982 482 PMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVT 561 (582)
Q Consensus 482 ~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 561 (582)
++.+|||||||||+|||+|+.+|++|||||||||||+.++..+.+.|+++++|||+||||++++..+||+|++|++|+++
T Consensus 160 ~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~~tviiisHd~~~~~~~~d~i~~l~~g~i~ 239 (556)
T PRK11819 160 KVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYPGTVVAVTHDRYFLDNVAGWILELDRGRGI 239 (556)
T ss_pred chhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEeCCEEE
Confidence 78999999999999999999999999999999999999999999999999889999999999999999999999999997
Q ss_pred EEcCCHHHHHHH
Q 007982 562 RWEGDIMDFKLH 573 (582)
Q Consensus 562 ~~~g~~~~~~~~ 573 (582)
.|.|++++|.+.
T Consensus 240 ~~~g~~~~~~~~ 251 (556)
T PRK11819 240 PWEGNYSSWLEQ 251 (556)
T ss_pred EecCCHHHHHHH
Confidence 789999988653
No 147
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.7e-38 Score=377.86 Aligned_cols=185 Identities=21% Similarity=0.322 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHh---cCCCceeecCCCCCCCHHHHHHHHHHHhhc---Cc
Q 007982 174 TAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALF---INPTILLLDEPTNHLDLEACVWLEETLKKF---DR 247 (582)
Q Consensus 174 ~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~---~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~ 247 (582)
....++ ++|+.+|+.....++++.+|||||+|||+||+||+ .+|++|||||||++||+.++..|+++|+++ +.
T Consensus 785 ~i~~~l-~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~ 863 (1809)
T PRK00635 785 SIHEKI-HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGH 863 (1809)
T ss_pred HHHHHH-HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 445556 58899999643258899999999999999999998 699999999999999999999999998765 67
Q ss_pred EEEEEecCHHHHHhhcCeEEEEe------CCeEEEEcCChhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChh
Q 007982 248 ILVVISHSQDFLNGVCTNIIHMQ------NKQLKFYTGNFDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSA 321 (582)
Q Consensus 248 tviivsHd~~~~~~~~d~i~~l~------~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (582)
|||+|||+++++ .+||++++|. +|+++ ..|+++++... ...... + ++.+
T Consensus 864 TVIiIsHdl~~i-~~aDrVi~L~p~gg~~~G~iv-~~Gtpeel~~~-~s~t~~----~---------l~~~--------- 918 (1809)
T PRK00635 864 TVVIIEHNMHVV-KVADYVLELGPEGGNLGGYLL-ASCSPEELIHL-HTPTAK----A---------LRPY--------- 918 (1809)
T ss_pred EEEEEeCCHHHH-HhCCEEEEEccCCCCCCCEEE-EeCCHHHHHhc-cCchHH----H---------HHHH---------
Confidence 999999999999 7999999996 67886 46777665421 000000 0 0000
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCcccccCceeEEEeccCCCCCCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcC
Q 007982 322 KLARQAQSKEKTLAKMERGGLTEKVVKDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGP 401 (582)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~ 401 (582)
+.... .. .... + .. ..+ +...++++.+.. ...|+|+||+|++|++++|+|+
T Consensus 919 ------------l~~~~--~~-~~~~---------~-~~--~~~-l~~~~i~i~~~~-~~~lk~isl~i~~gei~~itG~ 969 (1809)
T PRK00635 919 ------------LSSPQ--EL-PYLP---------D-PS--PKP-PVPADITIKNAY-QHNLKHIDLSLPRNALTAVTGP 969 (1809)
T ss_pred ------------hhccc--cc-cccc---------c-cc--ccc-cccceEEEeccc-cccccceeEEecCCcEEEEECC
Confidence 00000 00 0000 0 00 011 345566666542 3469999999999999999999
Q ss_pred CCCcHHHHHHHH
Q 007982 402 NGAGKSTLLKLM 413 (582)
Q Consensus 402 NGsGKSTLl~ll 413 (582)
||||||||+..+
T Consensus 970 nGsGKStL~~~~ 981 (1809)
T PRK00635 970 SASGKHSLVFDI 981 (1809)
T ss_pred CCCChhHHHHHH
Confidence 999999977654
No 148
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.3e-40 Score=325.85 Aligned_cols=194 Identities=23% Similarity=0.339 Sum_probs=164.2
Q ss_pred eEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeE
Q 007982 366 VLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRI 432 (582)
Q Consensus 366 ~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~ 432 (582)
+|+++|+++.|++. .++|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|...+. ..+
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i 80 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRL 80 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhE
Confidence 47899999999642 17999999999999999999999999999999999999999999987642 247
Q ss_pred EEechhhhhhcCCcccHHHHHHhc---C--CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE---Y--PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~---~--~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
+|++|... +....++.+++... + .. ...+++.++++.+|+.+.. ++++.+|||||||||+||||++.+|++
T Consensus 81 ~~~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~i 157 (218)
T cd03266 81 GFVSDSTG--LYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELL-DRRVGGFSTGMRQKVAIARALVHDPPV 157 (218)
T ss_pred EEecCCcc--cCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-hhhhhhcCHHHHHHHHHHHHHhcCCCE
Confidence 88888752 34446777765321 1 11 1235678899999997654 456789999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++..
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~ 216 (218)
T cd03266 158 LLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVY 216 (218)
T ss_pred EEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEee
Confidence 9999999999999999999999875 5799999999999999999999999999864
No 149
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.2e-40 Score=328.00 Aligned_cols=201 Identities=22% Similarity=0.335 Sum_probs=168.6
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEEE
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIAQ 434 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~~ 434 (582)
|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (232)
T cd03218 1 LRAENLSKRYGK-RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGY 79 (232)
T ss_pred CeEEEEEEEeCC-EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEE
Confidence 478999999964 67999999999999999999999999999999999999999999987542 23788
Q ss_pred echhhhhhcCCcccHHHHHHhcC---CCC---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEY---PGN---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLL 508 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 508 (582)
++|... +....++.+++.... ... ....+.++++.+|+.... +.++.+|||||||||+|||||+.+|++||
T Consensus 80 ~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~lll 156 (232)
T cd03218 80 LPQEAS--IFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLR-KSKASSLSGGERRRVEIARALATNPKFLL 156 (232)
T ss_pred ecCCcc--ccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 888753 334457777664311 111 234567899999998654 45678999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 509 LDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 509 LDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||+|||+.++..+.+.|+++ +.|||++|||++++..+||+|++|++|+++ +.|+.+++..
T Consensus 157 lDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 222 (232)
T cd03218 157 LDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVL-AEGTPEEIAA 222 (232)
T ss_pred ecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EEeCHHHhhc
Confidence 99999999999999999988764 569999999999999999999999999996 5788877644
No 150
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.7e-40 Score=327.11 Aligned_cols=202 Identities=29% Similarity=0.439 Sum_probs=168.8
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEe
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQF 435 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~ 435 (582)
+|+++|++++|+ ++.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|+
T Consensus 1 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~~ 79 (236)
T TIGR03864 1 ALEVAGLSFAYG-ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGVV 79 (236)
T ss_pred CEEEEeeEEEEC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEEe
Confidence 478999999996 467999999999999999999999999999999999999999999987552 247888
Q ss_pred chhhhhhcCCcccHHHHHHhc--CCC----ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 007982 436 HQHLAEKLDMDMSALQYMIKE--YPG----NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLL 509 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 509 (582)
+|... +.+..++.+++... ... ...+.+.++++.+|+..... +++.+|||||+|||+|||||+.+|++|||
T Consensus 80 ~q~~~--~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~LS~G~~qrl~laral~~~p~llll 156 (236)
T TIGR03864 80 FQQPT--LDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERAD-DKVRELNGGHRRRVEIARALLHRPALLLL 156 (236)
T ss_pred CCCCC--CcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhc-CChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 88743 33456777765421 111 12345788999999976544 56689999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 510 DEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 510 DEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
||||+|||+.++..+.+.|.++ +.|||+||||++++. .||++++|++|+++ +.|+++++...
T Consensus 157 DEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~i~~l~~G~i~-~~~~~~~~~~~ 222 (236)
T TIGR03864 157 DEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIE-ADDRLVVLHRGRVL-ADGAAAELRGA 222 (236)
T ss_pred cCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHh-hCCEEEEEeCCeEE-EeCCHHHHHHH
Confidence 9999999999999999988764 569999999999997 49999999999996 47888777643
No 151
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-40 Score=346.67 Aligned_cols=204 Identities=25% Similarity=0.303 Sum_probs=175.4
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEE
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQ 434 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~ 434 (582)
.++|+++|+++.|++ ..+|+|+||+|.+|++++|+|||||||||||++|+|+.+|++|+|...+. ..++|
T Consensus 17 ~~~l~l~~v~~~~~~-~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig~ 95 (377)
T PRK11607 17 TPLLEIRNLTKSFDG-QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPINM 95 (377)
T ss_pred CceEEEEeEEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 568999999999964 67999999999999999999999999999999999999999999987653 25899
Q ss_pred echhhhhhcCCcccHHHHHHhcC-----CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEY-----PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLL 508 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 508 (582)
++|+.. +.+..|+.+++.... +.. ..+++.++++.+||.+...+ .+.+|||||||||+|||||+.+|++||
T Consensus 96 vfQ~~~--lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-~~~~LSgGq~QRVaLARAL~~~P~lLL 172 (377)
T PRK11607 96 MFQSYA--LFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKR-KPHQLSGGQRQRVALARSLAKRPKLLL 172 (377)
T ss_pred EeCCCc--cCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcC-ChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999864 556778888875321 111 23567889999999876554 558999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHH----hcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 509 LDEPTNHLDIETIDSLAEALN----EWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 509 LDEPt~~LD~~~~~~l~~~l~----~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||++||+.++..+.+.|. +.+.|+|+||||++++..+||+|++|++|++. ..|++.++..
T Consensus 173 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~-~~g~~~~~~~ 239 (377)
T PRK11607 173 LDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFV-QIGEPEEIYE 239 (377)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEE-EEcCHHHHHh
Confidence 999999999999988876554 45789999999999999999999999999997 4788888765
No 152
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.4e-40 Score=325.34 Aligned_cols=192 Identities=25% Similarity=0.365 Sum_probs=160.6
Q ss_pred eEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------
Q 007982 366 VLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------- 429 (582)
+|+++|+++.|++. .++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (221)
T TIGR02211 1 LLKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKL 80 (221)
T ss_pred CEEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHH
Confidence 47899999999642 46999999999999999999999999999999999999999999987541
Q ss_pred --eeEEEechhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc
Q 007982 430 --LRIAQFHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 430 --~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
..++|++|... +....++.+++... .... ..+.+.++++.+|+.... ++++.+|||||||||+|||+|+
T Consensus 81 ~~~~i~~v~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~ 157 (221)
T TIGR02211 81 RNKKLGFIYQFHH--LLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRI-NHRPSELSGGERQRVAIARALV 157 (221)
T ss_pred HHhcEEEEecccc--cCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHh
Confidence 24788888742 33346777766421 1111 234578899999997654 4566899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEE
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVT 561 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 561 (582)
.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.. ||+|++|++|+++
T Consensus 158 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 158 NQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred CCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 999999999999999999999999998754 5799999999999965 8999999999874
No 153
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-40 Score=370.12 Aligned_cols=204 Identities=26% Similarity=0.453 Sum_probs=172.4
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCC
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDM 445 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~ 445 (582)
+|.++||+++|++ +.+|+|+||+|.+|+++||+||||||||||||+|+|+++|++|+|.+.+...++|++|.... .
T Consensus 1 ~i~i~nls~~~g~-~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~~~i~~~~q~~~~-~-- 76 (638)
T PRK10636 1 MIVFSSLQIRRGV-RVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGNWQLAWVNQETPA-L-- 76 (638)
T ss_pred CEEEEEEEEEeCC-ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCC-C--
Confidence 5889999999964 67999999999999999999999999999999999999999999998877678888874211 0
Q ss_pred cccHHHHHH-----------------------------hc---CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHH
Q 007982 446 DMSALQYMI-----------------------------KE---YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRS 492 (582)
Q Consensus 446 ~~~~~~~~~-----------------------------~~---~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkq 492 (582)
..+...++. .. ... ....++..+|..+||.....++++.+|||||||
T Consensus 77 ~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lgl~~~~~~~~~~~LSgGerq 156 (638)
T PRK10636 77 PQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGLGFSNEQLERPVSDFSGGWRM 156 (638)
T ss_pred CCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhCCCCchhhcCchhhcCHHHHH
Confidence 011111100 00 001 123567889999999743345688999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 493 RVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 493 rv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||+||++|+.+|+||||||||||||+.++..|.+.|.++++|||+||||++++.++||+|++|++|+++.|.|++..|..
T Consensus 157 Rv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~~~tviivsHd~~~l~~~~d~i~~L~~G~i~~~~g~~~~~~~ 236 (638)
T PRK10636 157 RLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIHIEQQSLFEYTGNYSSFEV 236 (638)
T ss_pred HHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHhcCEEEEEeCCEEEEecCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999989999999976
Q ss_pred H
Q 007982 573 H 573 (582)
Q Consensus 573 ~ 573 (582)
.
T Consensus 237 ~ 237 (638)
T PRK10636 237 Q 237 (638)
T ss_pred H
Confidence 3
No 154
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.2e-40 Score=324.99 Aligned_cols=191 Identities=28% Similarity=0.425 Sum_probs=160.8
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------eeE
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------------LRI 432 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------------~~~ 432 (582)
|+++|+++.|++.+.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..+
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~i 80 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRKI 80 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHhe
Confidence 468999999964457999999999999999999999999999999999999999999987542 137
Q ss_pred EEechhhhhhcCCcccHHHHHHhc---C--CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE---Y--PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~---~--~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
+|++|... +....++.+++... . .. ...+++.++++.+|+..... +++.+|||||||||+|||||+.+|++
T Consensus 81 ~~v~q~~~--~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~qrv~laral~~~p~l 157 (214)
T cd03292 81 GVVFQDFR--LLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHR-ALPAELSGGEQQRVAIARAIVNSPTI 157 (214)
T ss_pred EEEecCch--hccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-CChhhcCHHHHHHHHHHHHHHcCCCE
Confidence 88888753 33445777765421 1 11 12346788999999976544 45689999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeE
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAV 560 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i 560 (582)
|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++
T Consensus 158 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 158 LIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999998875 57999999999999999999999999874
No 155
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-40 Score=328.22 Aligned_cols=207 Identities=25% Similarity=0.383 Sum_probs=160.2
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---H---HHHHH
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---K---LEKEA 146 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~---~~~~~ 146 (582)
|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++... . .....
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~----~~g~~~~~~~~~~~~~~~ 76 (235)
T cd03261 1 IELRGLTKSFGGRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVL----IDGEDISGLSEAELYRLR 76 (235)
T ss_pred CeEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEEccccChhhHHHHh
Confidence 5789999999988999999999999999999999999999999999999988765432 222110 0 01111
Q ss_pred HHhcc--ccCC---CcchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 147 EILGA--QEDG---GGEQLERVYERLE---ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 147 ~~~~~--~~~~---~~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
..+++ +... .....+++..... .........++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|
T Consensus 77 ~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~ia~al~~~p 155 (235)
T cd03261 77 RRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRG-AEDLYPAELSGGMKKRVALARALALDP 155 (235)
T ss_pred cceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCch-hhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 22222 2111 1233333322111 1233445567889999999975 468899999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|+++ +.|+++++.
T Consensus 156 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 225 (235)
T cd03261 156 ELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIV-AEGTPEELR 225 (235)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEE-EecCHHHHc
Confidence 999999999999999999999998764 679999999999999999999999999996 456666543
No 156
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.1e-40 Score=324.51 Aligned_cols=198 Identities=24% Similarity=0.365 Sum_probs=154.0
Q ss_pred ceEEeeeEEEECC--eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------HHH
Q 007982 72 DIRIESLSVTFHG--HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------KLE 143 (582)
Q Consensus 72 ~i~v~nls~~y~~--~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~~~ 143 (582)
+|+++|++++|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++... ...
T Consensus 1 ~l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i----~~~g~~~~~~~~~~~~ 76 (216)
T TIGR00960 1 MIRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKI----RFNGQDLTRLRGREIP 76 (216)
T ss_pred CeEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE----EECCEehhhcChhHHH
Confidence 4789999999964 479999999999999999999999999999999999998875543 2222111 011
Q ss_pred HHHHHhcc--ccCC---CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhc
Q 007982 144 KEAEILGA--QEDG---GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFI 216 (582)
Q Consensus 144 ~~~~~~~~--~~~~---~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~ 216 (582)
.....+++ +... .....+++..... .......+.++.++++.+|+.+ ..++++.+|||||||||+|||||+.
T Consensus 77 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~laral~~ 155 (216)
T TIGR00960 77 FLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEG-KAHALPMQLSGGEQQRVAIARAIVH 155 (216)
T ss_pred HHHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCHHHHHHHHHHHHHhc
Confidence 11122322 2211 1123333322111 2233445667899999999974 5688999999999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeE
Q 007982 217 NPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQL 274 (582)
Q Consensus 217 ~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i 274 (582)
+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|++
T Consensus 156 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 156 KPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999876 67999999999999999999999999974
No 157
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.7e-40 Score=325.33 Aligned_cols=200 Identities=25% Similarity=0.371 Sum_probs=166.4
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEEE
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIAQ 434 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~~ 434 (582)
|+++|++++|++ .++++++||+|.+|+++||+||||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (222)
T cd03224 1 LEVENLNAGYGK-SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGY 79 (222)
T ss_pred CEEeeEEeecCC-eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEE
Confidence 478999999964 57999999999999999999999999999999999999999999987542 23788
Q ss_pred echhhhhhcCCcccHHHHHHhcC---C-CChHHHHHHHHHhc-CCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEY---P-GNEEEKMRAAIGRF-GLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLL 509 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~l~~~-gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 509 (582)
++|... +....++.+++.... . ......+.++++.+ ++.... ++++.+|||||||||+|||||+.+|++|||
T Consensus 80 ~~q~~~--~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~llll 156 (222)
T cd03224 80 VPEGRR--IFPELTVEENLLLGAYARRRAKRKARLERVYELFPRLKERR-KQLAGTLSGGEQQMLAIARALMSRPKLLLL 156 (222)
T ss_pred eccccc--cCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhhhhh-hCchhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 888753 344567777664321 1 11234566778888 465543 456789999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 510 DEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 510 DEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
||||+|||+.++..+.+.|+++ +.|||++|||++++..+||+|++|++|+++ ..|+.+++.
T Consensus 157 DEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 220 (222)
T cd03224 157 DEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVV-LEGTAAELL 220 (222)
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEE-EeCCHHHHh
Confidence 9999999999999999999765 579999999999999999999999999997 478777654
No 158
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-40 Score=334.71 Aligned_cols=203 Identities=25% Similarity=0.344 Sum_probs=167.3
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------eeE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------------LRI 432 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------------~~~ 432 (582)
||+++|++++|++ +.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..+
T Consensus 1 ml~~~~l~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 1 MLATSDLWFRYQD-EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred CeEEEEEEEEcCC-cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 5889999999964 57999999999999999999999999999999999999999999987542 137
Q ss_pred EEechhhhhhcCCcccHHHHHHh---cC--CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIK---EY--PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~---~~--~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
+|++|.....+ +..++.+++.. .. ... ..+.+.++++.+|+.+.. ++++.+|||||||||+|||+|+.+|++
T Consensus 80 ~~v~q~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrl~laraL~~~p~l 157 (271)
T PRK13638 80 ATVFQDPEQQI-FYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-HQPIQCLSHGQKKRVAIAGALVLQARY 157 (271)
T ss_pred EEEeeChhhcc-ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-cCCchhCCHHHHHHHHHHHHHHcCCCE
Confidence 88888753211 22344444321 11 111 124567889999997654 456789999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ ..|+.+++..
T Consensus 158 llLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 225 (271)
T PRK13638 158 LLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQIL-THGAPGEVFA 225 (271)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999998875 579999999999999999999999999997 4788877644
No 159
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-40 Score=322.68 Aligned_cols=191 Identities=24% Similarity=0.351 Sum_probs=162.5
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEec
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQFH 436 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~~ 436 (582)
|+++|+++.|++ .++++|+||+|.+| +++|+||||||||||+++|+|+++|++|+|...+. ..++|++
T Consensus 1 i~~~~~~~~~~~-~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 78 (211)
T cd03264 1 LQLENLTKRYGK-KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGYLP 78 (211)
T ss_pred CEEEEEEEEECC-EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEEec
Confidence 478999999964 57999999999999 99999999999999999999999999999987652 2478888
Q ss_pred hhhhhhcCCcccHHHHHHhc-----CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 007982 437 QHLAEKLDMDMSALQYMIKE-----YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLD 510 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 510 (582)
|+.. +....++.+++... ... ...+.+.++++.+|+.+.. +.++.+|||||||||+|||||+.+|++||||
T Consensus 79 q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~llllD 155 (211)
T cd03264 79 QEFG--VYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-KKKIGSLSGGMRRRVGIAQALVGDPSILIVD 155 (211)
T ss_pred CCCc--ccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-hCchhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 8753 33445777765421 111 1235678899999997654 4566899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 511 EPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 511 EPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
|||+|||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|++..
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~ 209 (211)
T cd03264 156 EPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVF 209 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999876 5799999999999999999999999999863
No 160
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-40 Score=364.54 Aligned_cols=204 Identities=27% Similarity=0.457 Sum_probs=174.2
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCC
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDM 445 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~ 445 (582)
+|+++|++++|++ +++|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.+...++|++|.+. +..
T Consensus 1 ml~i~~ls~~~~~-~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~--~~~ 77 (530)
T PRK15064 1 MLSTANITMQFGA-KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQF--AFE 77 (530)
T ss_pred CEEEEEEEEEeCC-cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCC--cCC
Confidence 4789999999964 6799999999999999999999999999999999999999999999877667999998753 223
Q ss_pred cccHHHHHHhc----------------CC----------------------CChHHHHHHHHHhcCCCCccccCCCCCCC
Q 007982 446 DMSALQYMIKE----------------YP----------------------GNEEEKMRAAIGRFGLTGKAQVMPMKNLS 487 (582)
Q Consensus 446 ~~~~~~~~~~~----------------~~----------------------~~~~~~~~~~l~~~gl~~~~~~~~~~~LS 487 (582)
..++.+++... .+ .....++.++++.+|+.....++++.+||
T Consensus 78 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS 157 (530)
T PRK15064 78 EFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEEQHYGLMSEVA 157 (530)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChhHhcCchhhcC
Confidence 34444443210 00 01134577899999997544445678999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCH
Q 007982 488 DGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDI 567 (582)
Q Consensus 488 gGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 567 (582)
|||||||+|||+|+.+|+||||||||+|||+.++..+.+.|.+.+.|||+||||++++.++||+|++|++|+++.+.|++
T Consensus 158 gGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~~~g~~ 237 (530)
T PRK15064 158 PGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNERNSTMIIISHDRHFLNSVCTHMADLDYGELRVYPGNY 237 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcceEEEEeCCEEEEecCCH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999997689999
Q ss_pred HHHHH
Q 007982 568 MDFKL 572 (582)
Q Consensus 568 ~~~~~ 572 (582)
++|.+
T Consensus 238 ~~~~~ 242 (530)
T PRK15064 238 DEYMT 242 (530)
T ss_pred HHHHH
Confidence 98864
No 161
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.6e-40 Score=323.92 Aligned_cols=190 Identities=29% Similarity=0.431 Sum_probs=158.4
Q ss_pred EEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEEe
Q 007982 368 QFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQF 435 (582)
Q Consensus 368 ~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~~ 435 (582)
+++|+++.|++. +.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 368999999642 57999999999999999999999999999999999999999999987652 247888
Q ss_pred chhhhhhcCCcccHHHHHHhc---C--CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 007982 436 HQHLAEKLDMDMSALQYMIKE---Y--PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLL 509 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~---~--~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 509 (582)
+|..... .+..++.+++... . .. .....+.++++.+|+.... ++++.+|||||||||+|||||+.+|++|||
T Consensus 81 ~q~~~~~-~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~laral~~~p~llll 158 (211)
T cd03225 81 FQNPDDQ-FFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLR-DRSPFTLSGGQKQRVAIAGVLAMDPDILLL 158 (211)
T ss_pred ecChhhh-cCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8875311 2345777765421 1 11 1234678899999997554 456689999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCe
Q 007982 510 DEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQA 559 (582)
Q Consensus 510 DEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~ 559 (582)
||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+
T Consensus 159 DEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 159 DEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999998775 4699999999999999999999999884
No 162
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-40 Score=329.74 Aligned_cols=204 Identities=25% Similarity=0.413 Sum_probs=170.6
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------ee
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LR 431 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~ 431 (582)
+++|+++|+++.|++ .++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..
T Consensus 3 ~~~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 3 QPLLSVSGLMMRFGG-LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred CceEEEeeEEEEECC-EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 458999999999964 67999999999999999999999999999999999999999999987652 12
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcC------------------CCC---hHHHHHHHHHhcCCCCccccCCCCCCChhH
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEY------------------PGN---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQ 490 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~------------------~~~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGq 490 (582)
++|++|... +....++.+++.... ... ..+.+.++++.+|+.... ++++.+|||||
T Consensus 82 i~~~~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~ 158 (255)
T PRK11300 82 VVRTFQHVR--LFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHA-NRQAGNLAYGQ 158 (255)
T ss_pred eEEeccCcc--cCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhh-hCChhhCCHHH
Confidence 667777643 344567777654210 001 124577889999997654 45678999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCC
Q 007982 491 RSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGD 566 (582)
Q Consensus 491 kqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~ 566 (582)
||||+|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++ +.|+
T Consensus 159 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~-~~~~ 237 (255)
T PRK11300 159 QRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPL-ANGT 237 (255)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-ecCC
Confidence 99999999999999999999999999999999999988754 579999999999999999999999999996 5888
Q ss_pred HHHHHH
Q 007982 567 IMDFKL 572 (582)
Q Consensus 567 ~~~~~~ 572 (582)
.+++..
T Consensus 238 ~~~~~~ 243 (255)
T PRK11300 238 PEEIRN 243 (255)
T ss_pred HHHHhh
Confidence 887654
No 163
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-40 Score=335.30 Aligned_cols=205 Identities=24% Similarity=0.340 Sum_probs=169.0
Q ss_pred eEEEEEEEEEecCC----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------
Q 007982 366 VLQFVEVTFGYTPD----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------ 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------ 429 (582)
.|+++|++++|++. .++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 47899999999642 36999999999999999999999999999999999999999999987542
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc---C--CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE---Y--PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~---~--~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 500 (582)
..++|++|.....+. ..++.+++... . ... ..+.+.++++.+|+.....++++.+|||||||||+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al 160 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLF-EETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIAGIL 160 (280)
T ss_pred HHHhheEEEeeChhhhhc-cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 237888887522222 34777765421 1 111 1235678899999974333567789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|+++++..
T Consensus 161 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 234 (280)
T PRK13649 161 AMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLV-LSGKPKDIFQ 234 (280)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999999999998775 579999999999999999999999999997 4788877644
No 164
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.3e-40 Score=333.65 Aligned_cols=204 Identities=22% Similarity=0.326 Sum_probs=170.4
Q ss_pred CeEEEEEEEEEecCC--ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------ee
Q 007982 365 PVLQFVEVTFGYTPD--NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LR 431 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~--~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~ 431 (582)
++|+++|+++.|++. ..+|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|.+.+. ..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13650 3 NIIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHK 82 (279)
T ss_pred ceEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhh
Confidence 478999999999632 45999999999999999999999999999999999999999999987652 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcC-----CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEY-----PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
++|++|.+.. ..+..++.+++.... .. ...+++.++++.+||.+... +++.+|||||+|||+|||||+.+|+
T Consensus 83 i~~v~q~~~~-~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-~~~~~LSgGq~qrv~lAral~~~p~ 160 (279)
T PRK13650 83 IGMVFQNPDN-QFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKE-REPARLSGGQKQRVAIAGAVAMRPK 160 (279)
T ss_pred ceEEEcChHH-hcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhh-CCcccCCHHHHHHHHHHHHHHcCCC
Confidence 7899987532 223457777764221 11 12356788999999986554 5668999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|||||||+|||+.++..+.+.|+++ +.|||+||||++++ ..||+|++|++|+++ .+|+++++..
T Consensus 161 lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~-~~~dri~~l~~G~i~-~~g~~~~~~~ 229 (279)
T PRK13650 161 IIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEV-ALSDRVLVMKNGQVE-STSTPRELFS 229 (279)
T ss_pred EEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHH-HhCCEEEEEECCEEE-EECCHHHHHc
Confidence 99999999999999999999988764 57999999999999 589999999999997 4788887654
No 165
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=6.8e-40 Score=324.80 Aligned_cols=195 Identities=24% Similarity=0.313 Sum_probs=162.8
Q ss_pred CCeEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------
Q 007982 364 PPVLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------- 429 (582)
+++|+++|++++|++. .++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 4 ~~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 83 (228)
T PRK10584 4 ENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARA 83 (228)
T ss_pred CceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHH
Confidence 4689999999999642 25999999999999999999999999999999999999999999986542
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhc--C---C-CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKE--Y---P-GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWL 499 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~---~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAra 499 (582)
..++|++|.+. +....++.+++... + . ....+++.++++.+|+..... +++.+|||||+|||+||||
T Consensus 84 ~~~~~~i~~~~q~~~--l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~Ge~qrl~la~a 160 (228)
T PRK10584 84 KLRAKHVGFVFQSFM--LIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLD-HLPAQLSGGEQQRVALARA 160 (228)
T ss_pred HHHhheEEEEEcccc--cCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-CChhhCCHHHHHHHHHHHH
Confidence 24788888753 33445677765421 1 1 112456788999999976544 4568999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 500 AYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 500 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
|+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++. .||++++|++|++++
T Consensus 161 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~i~~l~~g~i~~ 226 (228)
T PRK10584 161 FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAA-RCDRRLRLVNGQLQE 226 (228)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEe
Confidence 99999999999999999999999999998654 579999999999985 599999999999863
No 166
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=8.5e-40 Score=330.93 Aligned_cols=203 Identities=22% Similarity=0.335 Sum_probs=171.1
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCC---CcEEEEcCc-----------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPL---DGMVRRHNH----------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~---~G~i~~~~~----------- 429 (582)
+++|+++||++.|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++|+ +|+|.+.+.
T Consensus 2 ~~~l~~~nl~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 2 QTIIRVEKLAKTFNQ-HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred CcEEEEeeEEEEeCC-eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 368999999999964 67999999999999999999999999999999999999986 499976552
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhcC--------------CCChHHHHHHHHHhcCCCCccccCCCCCCChhH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKEY--------------PGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQ 490 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGq 490 (582)
..++|++|... +....++.+++.... .....+++.++++.+|+.... ++++.+|||||
T Consensus 81 ~~~~~~~i~~~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~ 157 (262)
T PRK09984 81 IRKSRANTGYIFQQFN--LVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFA-HQRVSTLSGGQ 157 (262)
T ss_pred HHHHHhheEEEccccc--cccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHH-hCCccccCHHH
Confidence 13688888753 334567777764211 111234678899999997544 45678999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCC
Q 007982 491 RSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGD 566 (582)
Q Consensus 491 kqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~ 566 (582)
||||+|||||+.+|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|++. ++|+
T Consensus 158 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~-~~g~ 236 (262)
T PRK09984 158 QQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVF-YDGS 236 (262)
T ss_pred HHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCC
Confidence 99999999999999999999999999999999999999875 469999999999999999999999999995 6899
Q ss_pred HHHHH
Q 007982 567 IMDFK 571 (582)
Q Consensus 567 ~~~~~ 571 (582)
++++.
T Consensus 237 ~~~~~ 241 (262)
T PRK09984 237 SQQFD 241 (262)
T ss_pred HHHhc
Confidence 98873
No 167
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-40 Score=332.99 Aligned_cols=204 Identities=25% Similarity=0.402 Sum_probs=171.3
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------eeE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------------LRI 432 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------------~~~ 432 (582)
+|+++|++++|++...+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|...+. ..+
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 1 ILETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred CEEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 4789999999964457999999999999999999999999999999999999999999987542 137
Q ss_pred EEechhhhhhcCCcccHHHHHHhc---C--CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE---Y--PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~---~--~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
+|++|.+...+ +..++.+++... . .. ...+++.++++.+|+.+.. ++++.+|||||+|||+|||||+.+|++
T Consensus 81 ~~v~q~~~~~~-~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-~~~~~~LS~Gq~qrv~laral~~~p~l 158 (275)
T PRK13639 81 GIVFQNPDDQL-FAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFE-NKPPHHLSGGQKKRVAIAGILAMKPEI 158 (275)
T ss_pred EEEeeChhhhh-ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhh-cCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 88888753222 235777766421 1 11 1234578899999998654 456789999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ +.|+++++..
T Consensus 159 lllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 226 (275)
T PRK13639 159 IVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKII-KEGTPKEVFS 226 (275)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999998875 579999999999999999999999999997 4788888754
No 168
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-41 Score=312.76 Aligned_cols=205 Identities=22% Similarity=0.302 Sum_probs=170.5
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCC-----cEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLD-----GMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~-----G~i~~~~~--------- 429 (582)
.+.++++|+++.|+ ++.+|+|||+.|.++.++||+||+|||||||||++..+..... |+|.+.+.
T Consensus 5 ~~~~~~~~l~~yYg-~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 5 IPAIEVRDLNLYYG-DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred cceeEecceeEEEC-chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 46799999999996 5679999999999999999999999999999999999988765 88877653
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhcC-----C-CChHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKEY-----P-GNEEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~l 496 (582)
.++|.++|.+. ++.+++++++.... . ..-.+.++..|....|-+. ..+.+...||||||||++|
T Consensus 84 ~~lRr~vGMVFQkPn---PFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcI 160 (253)
T COG1117 84 VELRRRVGMVFQKPN---PFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCI 160 (253)
T ss_pred HHHHHHheeeccCCC---CCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHH
Confidence 35889999864 35588999886432 1 1123456777877776432 2234456899999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEWD--GGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
||||+.+|+|||||||||+|||-+...|.++|.++. -|||+|||+|..+.+++|+++++..|++++| |+.+.+...
T Consensus 161 ARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~-g~T~~iF~~ 238 (253)
T COG1117 161 ARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEF-GPTDKIFTN 238 (253)
T ss_pred HHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEE-cCHHhhhcC
Confidence 999999999999999999999999999999999874 5999999999999999999999999999985 666666554
No 169
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=9.7e-40 Score=339.81 Aligned_cols=209 Identities=20% Similarity=0.319 Sum_probs=173.8
Q ss_pred CCCeEEEEEEEEEecC---CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCC---CcEEEEcCc-------
Q 007982 363 PPPVLQFVEVTFGYTP---DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPL---DGMVRRHNH------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~---~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~---~G~i~~~~~------- 429 (582)
..++|+++|+++.|+. ...+++||||+|.+||++||+|+||||||||+++|+|+++|. +|+|.+.+.
T Consensus 9 ~~~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~ 88 (330)
T PRK09473 9 ADALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPE 88 (330)
T ss_pred CCceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCH
Confidence 4578999999999952 246999999999999999999999999999999999999996 999987652
Q ss_pred --------eeEEEechhhhhhcCCcccHHHHHHh---cCCC-C---hHHHHHHHHHhcCCCCcc--ccCCCCCCChhHHH
Q 007982 430 --------LRIAQFHQHLAEKLDMDMSALQYMIK---EYPG-N---EEEKMRAAIGRFGLTGKA--QVMPMKNLSDGQRS 492 (582)
Q Consensus 430 --------~~~~~~~q~~~~~~~~~~~~~~~~~~---~~~~-~---~~~~~~~~l~~~gl~~~~--~~~~~~~LSgGqkq 492 (582)
..++|++|+....+++..++.+++.. .... . ..+++.++|+.+||.+.. ....+.+|||||+|
T Consensus 89 ~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~Q 168 (330)
T PRK09473 89 KELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQ 168 (330)
T ss_pred HHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHH
Confidence 25899999975556666666654432 1111 1 235678899999997421 23455899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHH
Q 007982 493 RVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIM 568 (582)
Q Consensus 493 rv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~ 568 (582)
||+|||||+.+|+|||+||||++||+.++..+.++|+++ +.|+|+||||++++.++||+|++|.+|+|++ .|+.+
T Consensus 169 Rv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive-~g~~~ 247 (330)
T PRK09473 169 RVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTME-YGNAR 247 (330)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-ECCHH
Confidence 999999999999999999999999999999999888764 6799999999999999999999999999975 78888
Q ss_pred HHHH
Q 007982 569 DFKL 572 (582)
Q Consensus 569 ~~~~ 572 (582)
++..
T Consensus 248 ~i~~ 251 (330)
T PRK09473 248 DVFY 251 (330)
T ss_pred HHHh
Confidence 8754
No 170
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-40 Score=327.71 Aligned_cols=202 Identities=19% Similarity=0.290 Sum_probs=170.3
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~ 433 (582)
+|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..++
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 81 (241)
T PRK10895 3 TLTAKNLAKAYKG-RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIG 81 (241)
T ss_pred eEEEeCcEEEeCC-EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeE
Confidence 6899999999964 67999999999999999999999999999999999999999999987651 2478
Q ss_pred EechhhhhhcCCcccHHHHHHhcC---C----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEY---P----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
|++|... +....++.+++.... . ......+.++++.+|+.... +.++.+|||||+|||+||||++.+|++
T Consensus 82 ~~~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~l 158 (241)
T PRK10895 82 YLPQEAS--IFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLR-DSMGQSLSGGERRRVEIARALAANPKF 158 (241)
T ss_pred EeccCCc--ccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHh-hcchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 8888753 334467777664321 1 11234578899999997644 456789999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||||+|||+.++..+.+.+.++ +.|||++|||++++..+||++++|++|+++ ..|+++++..
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~ 226 (241)
T PRK10895 159 ILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLI-AHGTPTEILQ 226 (241)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEE-eeCCHHHHhc
Confidence 9999999999999999888877653 679999999999999999999999999997 4888888754
No 171
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=326.50 Aligned_cols=201 Identities=24% Similarity=0.327 Sum_probs=170.0
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------------
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------------- 429 (582)
+|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 2 ~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 2 SIQLNGINCFYGA-HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEEeeEEEECC-eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 5889999999964 67999999999999999999999999999999999999999999987542
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc----CCCC---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE----YPGN---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
..++|++|... +....++.+++... .... ....+.++++.+|+..... +++.+|||||||||+||||++
T Consensus 81 ~~~i~~~~q~~~--~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~LS~G~~qrv~laral~ 157 (242)
T PRK11124 81 RRNVGMVFQQYN--LWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYAD-RFPLHLSGGQQQRVAIARALM 157 (242)
T ss_pred HhheEEEecCcc--ccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-CChhhCCHHHHHHHHHHHHHh
Confidence 13788888753 34456777776421 1111 2345788899999976544 556899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
.+|++|||||||++||+.++..+.+.|+++ +.|||+||||.+++..+||++++|++|++. +.|+++++.
T Consensus 158 ~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~ 229 (242)
T PRK11124 158 MEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIV-EQGDASCFT 229 (242)
T ss_pred cCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHhc
Confidence 999999999999999999999999998864 579999999999999999999999999996 588888764
No 172
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.1e-40 Score=339.73 Aligned_cols=194 Identities=26% Similarity=0.358 Sum_probs=164.6
Q ss_pred EecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEechhhhhhcC
Q 007982 375 GYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQFHQHLAEKLD 444 (582)
Q Consensus 375 ~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~~q~~~~~~~ 444 (582)
+|+ ++.+|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|.+.+. ..++|++|... +.
T Consensus 2 ~y~-~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~--~~ 78 (302)
T TIGR01188 2 VYG-DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYAS--VD 78 (302)
T ss_pred eeC-CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCC--CC
Confidence 564 467999999999999999999999999999999999999999999987652 24889988753 44
Q ss_pred CcccHHHHHHhc---CC--CC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCH
Q 007982 445 MDMSALQYMIKE---YP--GN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDI 518 (582)
Q Consensus 445 ~~~~~~~~~~~~---~~--~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~ 518 (582)
...|+.+++... +. .. ..+++.++++.+||.... ++++.+|||||||||+||+||+.+|++|||||||+|||+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAA-DRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-CCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 556777776421 11 11 234678899999998654 456789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 519 ETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 519 ~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
.++..+.+.|+++ +.|||++|||++++.++||+|++|++|+++ +.|+++++...
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~l~~~ 214 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRII-AEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EECCHHHHHHh
Confidence 9999999998875 579999999999999999999999999997 58898887654
No 173
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=328.68 Aligned_cols=202 Identities=27% Similarity=0.374 Sum_probs=170.6
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
+|+++|++++|++ +.+|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 2 ~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 2 TLRTENLTVGYGT-KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEEeEEEEECC-EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 6899999999964 67999999999999999999999999999999999999999999987652 13788
Q ss_pred echhhhhhcCCcccHHHHHHhc-------CC---CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKE-------YP---GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 504 (582)
++|... +....++.+++... +. ....+.+.++++.+|+.... +.++.+|||||+|||+||||++.+|
T Consensus 81 ~~q~~~--~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p 157 (255)
T PRK11231 81 LPQHHL--TPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLA-DRRLTDLSGGQRQRAFLAMVLAQDT 157 (255)
T ss_pred ecccCC--CCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHH-cCCcccCCHHHHHHHHHHHHHhcCC
Confidence 888743 33445677765431 11 11234678899999997654 4566899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++|||||||+|||+.++..+.+.|.++ +.|||++|||++++.++||++++|++|+++ +.|+.+++..
T Consensus 158 ~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 227 (255)
T PRK11231 158 PVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVM-AQGTPEEVMT 227 (255)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEE-EEcCHHHhcC
Confidence 999999999999999999999998764 579999999999999999999999999996 5788877643
No 174
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=328.77 Aligned_cols=202 Identities=27% Similarity=0.400 Sum_probs=170.5
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
+|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 2 ~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (258)
T PRK13548 2 MLEARNLSVRLGG-RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAV 80 (258)
T ss_pred eEEEEeEEEEeCC-eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEE
Confidence 6899999999964 67999999999999999999999999999999999999999999987652 23788
Q ss_pred echhhhhhcCCcccHHHHHHhcC-C-C----ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc------c
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEY-P-G----NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY------R 502 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~-~-~----~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~------~ 502 (582)
++|... +.+..++.+++.... . . ...+.+.++++.+|+.... +..+.+|||||||||+|||||+ .
T Consensus 81 ~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGe~qrv~la~al~~~~~~~~ 157 (258)
T PRK13548 81 LPQHSS--LSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLA-GRDYPQLSGGEQQRVQLARVLAQLWEPDG 157 (258)
T ss_pred EccCCc--CCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHh-cCCcccCCHHHHHHHHHHHHHhcccccCC
Confidence 888753 334567887764321 1 1 1234578899999997654 4566899999999999999999 5
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ ..|+.+++..
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 230 (258)
T PRK13548 158 PPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLV-ADGTPAEVLT 230 (258)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEE-eeCCHHHHhC
Confidence 99999999999999999999999988764 569999999999999999999999999997 5788887654
No 175
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-39 Score=323.88 Aligned_cols=202 Identities=22% Similarity=0.298 Sum_probs=167.5
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEEE
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIAQ 434 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~~ 434 (582)
|+++|+++.|++ +++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~ 79 (230)
T TIGR03410 1 LEVSNLNVYYGQ-SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAY 79 (230)
T ss_pred CEEEeEEEEeCC-eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEE
Confidence 478999999964 57999999999999999999999999999999999999999999987541 24788
Q ss_pred echhhhhhcCCcccHHHHHHhcC---CCChHHHHHHHHHhcC-CCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEY---PGNEEEKMRAAIGRFG-LTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLD 510 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~g-l~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 510 (582)
++|... +....++.+++.... .....+.+.++++.++ +.... +.++.+|||||+|||+|||||+.+|++||||
T Consensus 80 ~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~illlD 156 (230)
T TIGR03410 80 VPQGRE--IFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPVLKEML-GRRGGDLSGGQQQQLAIARALVTRPKLLLLD 156 (230)
T ss_pred eccCCc--ccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHhHHHHh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEec
Confidence 888753 334557777664321 1112334577788886 44433 4567899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 511 EPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 511 EPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
|||++||+.++..+.+.|.++ +.|||+||||++++..+||+|+++++|+++ ..|+.+++...
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~-~~~~~~~~~~~ 222 (230)
T TIGR03410 157 EPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVV-ASGAGDELDED 222 (230)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHcChH
Confidence 999999999999999998764 579999999999999999999999999996 57888877443
No 176
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=7.5e-40 Score=341.51 Aligned_cols=209 Identities=22% Similarity=0.333 Sum_probs=163.7
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH--HHHHHHHH
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL--KLEKEAEI 148 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~ 148 (582)
.+|+++||+++|+++.+|+|+||+|++|+++||+||||||||||+++|+|+.+|+.|.+. +++... ........
T Consensus 40 ~~i~i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~----i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 40 VAIDLAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKIT----VLGVPVPARARLARAR 115 (340)
T ss_pred eeEEEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEE----ECCEECCcchHHHhcc
Confidence 379999999999999999999999999999999999999999999999999988866432 222111 00111122
Q ss_pred hcc--ccC---CCcchHHHHH--HHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 149 LGA--QED---GGGEQLERVY--ERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 149 ~~~--~~~---~~~~~~~~~~--~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
+++ +.. ......+++. ..+..........++.++++.+++.+ ..++++.+|||||||||+||+||+.+|++|
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~-~~~~~~~~LS~G~kqrv~lA~aL~~~P~lL 194 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-KADARVSDLSGGMKRRLTLARALINDPQLL 194 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-hhCCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 332 211 1122333332 22222333445567888999999975 568899999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 222 LLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||||+|||+.++.++.++|+++ +.|||++||+++++..+||+|++|++|+++ +.|+.+++.
T Consensus 195 iLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~-~~g~~~~l~ 260 (340)
T PRK13536 195 ILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKI-AEGRPHALI 260 (340)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEcCHHHHH
Confidence 999999999999999999999875 679999999999999999999999999997 457766543
No 177
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=9.4e-40 Score=326.87 Aligned_cols=202 Identities=22% Similarity=0.311 Sum_probs=165.0
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCC--CCCCcEEEEcCc------------eeE
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDL--VPLDGMVRRHNH------------LRI 432 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~--~p~~G~i~~~~~------------~~~ 432 (582)
|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|++ +|++|+|...+. ..+
T Consensus 1 l~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 79 (243)
T TIGR01978 1 LKIKDLHVSVED-KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGL 79 (243)
T ss_pred CeEeeEEEEECC-EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccce
Confidence 478999999964 67999999999999999999999999999999999995 799999987652 126
Q ss_pred EEechhhhhhcCCcccHHHHHHhc---CC--------C-C-hHHHHHHHHHhcCCCCccccCCCC-CCChhHHHHHHHHH
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE---YP--------G-N-EEEKMRAAIGRFGLTGKAQVMPMK-NLSDGQRSRVVFAW 498 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~---~~--------~-~-~~~~~~~~l~~~gl~~~~~~~~~~-~LSgGqkqrv~lAr 498 (582)
+|++|.+. +....++.+++... .. . . ..+++.++++.+|+.....++++. +|||||||||+|||
T Consensus 80 ~~v~q~~~--~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la~ 157 (243)
T TIGR01978 80 FLAFQYPE--EIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEILQ 157 (243)
T ss_pred Eeeecccc--ccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHHH
Confidence 77788753 23345555544211 00 0 1 134578899999997433344555 59999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhh-cCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 499 LAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQV-AHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 499 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~-~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+ ||++++|++|++. +.|+++++.+
T Consensus 158 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 234 (243)
T TIGR01978 158 MALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIV-KSGDVELAKE 234 (243)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEE-EecCHHHhcc
Confidence 999999999999999999999999999999876 57999999999999998 8999999999996 5888886654
No 178
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-40 Score=309.72 Aligned_cols=214 Identities=22% Similarity=0.348 Sum_probs=165.1
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCC-CceeeeeechHHHH--------HH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDM-SSLEAVISCDEERL--------KL 142 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~-~~~~~~i~~~~~~~--------~~ 142 (582)
.++++||++.|+++.+|+|||+.|+++.+++||||||||||||||+++.+..... -.++|.+.+++.++ .+
T Consensus 7 ~~~~~~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~l 86 (253)
T COG1117 7 AIEVRDLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVEL 86 (253)
T ss_pred eeEecceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHH
Confidence 6899999999999999999999999999999999999999999999986654322 22344444433322 23
Q ss_pred HHHHHHhccccCC-CcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCC---hhhhhccCCCCChhHHHHHHHHHHHhc
Q 007982 143 EKEAEILGAQEDG-GGEQLERVYER--LEALDASTAEKRAAEILYGLGFN---KTMQAKKTRDFSGGWRMRIALARALFI 216 (582)
Q Consensus 143 ~~~~~~~~~~~~~-~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~---~~~~~~~~~~LSGGqrqRv~LAraL~~ 216 (582)
++....+++.+.+ ....++++... +.+......++.+++.|....|= .+.+++.+..||||||||+.|||||+.
T Consensus 87 Rr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~sa~~LSGGQQQRLcIARalAv 166 (253)
T COG1117 87 RRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKSALGLSGGQQQRLCIARALAV 166 (253)
T ss_pred HHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCCccCCChhHHHHHHHHHHHhc
Confidence 3333333322222 23445555433 33343466777788888776652 234577889999999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHhhcC--cEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 217 NPTILLLDEPTNHLDLEACVWLEETLKKFD--RILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 217 ~P~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
+|+|||||||||+|||.+...++++|.+++ -|||+|||++..+.+++|++.++..|+++.| |+.++++.
T Consensus 167 ~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~-g~T~~iF~ 237 (253)
T COG1117 167 KPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEF-GPTDKIFT 237 (253)
T ss_pred CCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEE-cCHHhhhc
Confidence 999999999999999999999999998874 5999999999999999999999999999876 55555543
No 179
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-39 Score=327.50 Aligned_cols=204 Identities=20% Similarity=0.259 Sum_probs=169.1
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc--------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH-------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~-------- 429 (582)
.+|+|+++|++++|++ +.+|+++||+|.+|++++|+||||||||||+++|+|++. |++|+|.+.+.
T Consensus 3 ~~~~l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 3 SPPKMEARGLSFFYGD-FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred CCcEEEEeeeEEEECC-eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 3688999999999964 579999999999999999999999999999999999974 58999987541
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhc--CC---C--ChHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKE--YP---G--NEEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRV 494 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~---~--~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv 494 (582)
..++|++|... +.. .++.+++... .. . ...+++.++++.+|+... ...+++.+|||||||||
T Consensus 82 ~~~~~~~i~~v~q~~~--~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv 158 (253)
T PRK14242 82 VVELRRRVGMVFQKPN--PFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRL 158 (253)
T ss_pred HHHHhhcEEEEecCCC--CCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHH
Confidence 24788888753 222 4777766421 11 1 123567888999998531 22456789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 495 VFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 495 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
+|||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|+++ ..|+++++.
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 236 (253)
T PRK14242 159 CIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLI-EVGPTEQIF 236 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 9999999999999999999999999999999999876 469999999999999999999999999996 578888765
No 180
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-40 Score=332.78 Aligned_cols=200 Identities=22% Similarity=0.270 Sum_probs=167.9
Q ss_pred EEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------------eeE
Q 007982 368 QFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------------LRI 432 (582)
Q Consensus 368 ~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------------~~~ 432 (582)
.++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..+
T Consensus 26 ~~~~~~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i 104 (269)
T cd03294 26 SKEEILKKTGQ-TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKI 104 (269)
T ss_pred hhhhhhhhcCC-ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcE
Confidence 57799999964 67999999999999999999999999999999999999999999987542 247
Q ss_pred EEechhhhhhcCCcccHHHHHHhc--C---CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE--Y---PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~--~---~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
+|++|... +....++.+++... . .. ...+++.++++.+||.+... +++.+|||||||||+|||||+.+|++
T Consensus 105 ~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~Gq~qrv~lAral~~~p~i 181 (269)
T cd03294 105 SMVFQSFA--LLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEH-KYPDELSGGMQQRVGLARALAVDPDI 181 (269)
T ss_pred EEEecCcc--cCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-CCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 88888753 33456777776431 1 11 12345788999999976544 56689999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++ ..|+.+++.+
T Consensus 182 llLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~ 250 (269)
T cd03294 182 LLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLV-QVGTPEEILT 250 (269)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHHh
Confidence 9999999999999999999988765 579999999999999999999999999997 4788877654
No 181
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.7e-39 Score=325.69 Aligned_cols=205 Identities=19% Similarity=0.272 Sum_probs=168.9
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC----CCcEEEEcCc---------ee
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP----LDGMVRRHNH---------LR 431 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p----~~G~i~~~~~---------~~ 431 (582)
.+|+++|++++| + +++|+|+||+|.+||+++|+||||||||||+++|+|+++| ++|+|...+. ..
T Consensus 3 ~~l~~~~l~~~~-~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 80 (254)
T PRK10418 3 QQIELRNIALQA-A-QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRK 80 (254)
T ss_pred cEEEEeCeEEEe-c-cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccce
Confidence 368999999999 3 5799999999999999999999999999999999999999 9999987542 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHh---cC-CCChHHHHHHHHHhcCCCCc--cccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIK---EY-PGNEEEKMRAAIGRFGLTGK--AQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~l~~~gl~~~--~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
++|++|.....+....++.+++.. .. .....+++.++++.+++... ..+.++.+|||||+|||+|||||+.+|+
T Consensus 81 i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~ 160 (254)
T PRK10418 81 IATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIALALLCEAP 160 (254)
T ss_pred EEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHHhcCCC
Confidence 888888753223333344443321 11 12234578899999999752 2245678999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++. ..|+.+++..
T Consensus 161 lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~ 230 (254)
T PRK10418 161 FIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIV-EQGDVETLFN 230 (254)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEE-EecCHHHHhh
Confidence 99999999999999999999888764 579999999999999999999999999996 5788887754
No 182
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=329.43 Aligned_cols=204 Identities=28% Similarity=0.385 Sum_probs=171.9
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeE
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRI 432 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~ 432 (582)
..+|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..+
T Consensus 5 ~~~l~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 5 VARLRGEQLTLGYGK-YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred ccEEEEEEEEEEECC-EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 357999999999974 67999999999999999999999999999999999999999999987653 247
Q ss_pred EEechhhhhhcCCcccHHHHHHhc-CC---------CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHcc
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE-YP---------GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 502 (582)
+|++|... +....++.+++... .+ ......+.++++.+|+.... ++++.+|||||||||+||||++.
T Consensus 84 ~~v~q~~~--~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Gq~qrv~laral~~ 160 (265)
T PRK10253 84 GLLAQNAT--TPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLA-DQSVDTLSGGQRQRAWIAMVLAQ 160 (265)
T ss_pred EEeeccCc--CCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHh-cCCcccCChHHHHHHHHHHHHhc
Confidence 88888753 33345677766432 11 11234678899999997654 45678999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|++|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++ ..|+++++..
T Consensus 161 ~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 233 (265)
T PRK10253 161 ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIV-AQGAPKEIVT 233 (265)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhh
Confidence 99999999999999999999999988764 568999999999999999999999999997 4788887654
No 183
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.3e-40 Score=321.57 Aligned_cols=190 Identities=24% Similarity=0.394 Sum_probs=160.3
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------eeEE
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------------LRIA 433 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------------~~~~ 433 (582)
|+++|+++.|++ +.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++
T Consensus 1 l~~~~l~~~~~~-~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (213)
T cd03262 1 IEIKNLHKSFGD-FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVG 79 (213)
T ss_pred CEEEEEEEEECC-eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcce
Confidence 468999999964 67999999999999999999999999999999999999999999987542 2367
Q ss_pred EechhhhhhcCCcccHHHHHHhc---CCC----ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKE---YPG----NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
|++|... +....++.+++... ... ...+++.++++.+|+.... ++++.+|||||+|||+|||||+.+|++
T Consensus 80 ~~~q~~~--~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~l 156 (213)
T cd03262 80 MVFQQFN--LFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKA-DAYPAQLSGGQQQRVAIARALAMNPKV 156 (213)
T ss_pred EEecccc--cCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-hhCccccCHHHHHHHHHHHHHhcCCCE
Confidence 8888753 33446777765421 111 1234578889999997654 456689999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeE
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAV 560 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i 560 (582)
|||||||+|||+.++..+.+.|+++ +.|||++|||++++.++||+|++|++|++
T Consensus 157 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 157 MLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999998875 57999999999999999999999999874
No 184
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=331.16 Aligned_cols=205 Identities=24% Similarity=0.331 Sum_probs=171.7
Q ss_pred CCeEEEEEEEEEecC-CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------ee
Q 007982 364 PPVLQFVEVTFGYTP-DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LR 431 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~-~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~ 431 (582)
.++|+++|+++.|++ .+++|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.+.+. ..
T Consensus 3 ~~~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13635 3 EEIIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQ 82 (279)
T ss_pred CceEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhh
Confidence 357999999999964 356999999999999999999999999999999999999999999987653 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
++|++|.+.. ..+..++.+++... .... ..+++.++++.+||..... +++.+|||||||||+|||||+.+|+
T Consensus 83 i~~~~q~~~~-~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-~~~~~LS~G~~qrv~laral~~~p~ 160 (279)
T PRK13635 83 VGMVFQNPDN-QFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLN-REPHRLSGGQKQRVAIAGVLALQPD 160 (279)
T ss_pred eEEEEeCHHH-hcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhh-CCcccCCHHHHHHHHHHHHHHcCCC
Confidence 7899988632 23345777776431 1111 2345788999999987654 4568999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||||||+|||+.++..+.+.|+++ +.|||+||||++++. .||+|++|++|+++ ..|+.+++..
T Consensus 161 lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~-~~d~i~~l~~G~i~-~~g~~~~~~~ 229 (279)
T PRK13635 161 IIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAA-QADRVIVMNKGEIL-EEGTPEEIFK 229 (279)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-cCCEEEEEECCEEE-EECCHHHHhc
Confidence 99999999999999999999998764 569999999999997 59999999999996 5788877654
No 185
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=333.13 Aligned_cols=205 Identities=20% Similarity=0.265 Sum_probs=167.0
Q ss_pred CeEEEEEEEEEecCC----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------
Q 007982 365 PVLQFVEVTFGYTPD----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------- 429 (582)
..|+++|++++|++. ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 458999999999643 24999999999999999999999999999999999999999999976542
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhc--CCC-C---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKE--YPG-N---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAW 498 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~-~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAr 498 (582)
..++|++|.+...+ +..++.+++... ... . ..+.+.++++.+++.....++++.+|||||||||+|||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~-~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~lar 163 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQL-FQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAG 163 (289)
T ss_pred HHHHhccEEEEEeCcchhh-hhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHH
Confidence 13788888752212 234666655321 111 1 12456788999999533334667899999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 499 LAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 499 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|+++ ..|+.+++.
T Consensus 164 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 239 (289)
T PRK13645 164 IIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVI-SIGSPFEIF 239 (289)
T ss_pred HHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 999999999999999999999999999888764 579999999999999999999999999997 478877764
No 186
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=324.41 Aligned_cols=204 Identities=21% Similarity=0.277 Sum_probs=169.0
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------ee
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LR 431 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~ 431 (582)
.++|+++|+++.|++ +.+|+++||+|.+||+++|+||||||||||+++|+|+++|++|+|...+. ..
T Consensus 3 ~~~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 3 KVMLSFDKVSAHYGK-IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred ccEEEEEeEEEeeCC-ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 358999999999964 67999999999999999999999999999999999999999999987652 13
Q ss_pred EEEechhhhhhcCCcccHHHHHHhc--CCCC--hHHHHHHHHHhc-CCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKE--YPGN--EEEKMRAAIGRF-GLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~l~~~-gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
++|++|... +....++.+++... .... ..+.+.++++.+ ++.+.. ..++.+|||||+|||+|||||+.+|++
T Consensus 82 i~~~~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~i 158 (237)
T PRK11614 82 VAIVPEGRR--VFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHERR-IQRAGTMSGGEQQMLAIGRALMSQPRL 158 (237)
T ss_pred EEEeccCcc--cCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHHHH-hCchhhCCHHHHHHHHHHHHHHhCCCE
Confidence 778888743 33345777776432 1111 233466677777 465443 346689999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||||+|||+.++..+.+.|+++ +.|||++|||++++.++||++++|++|+++ +.|++++...
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 226 (237)
T PRK11614 159 LLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVV-LEDTGDALLA 226 (237)
T ss_pred EEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEE-eeCCHHHHhc
Confidence 9999999999999999999988764 579999999999999999999999999996 5889888754
No 187
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.2e-39 Score=325.03 Aligned_cols=201 Identities=22% Similarity=0.294 Sum_probs=168.7
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCC-----CcEEEEcCc-----------
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPL-----DGMVRRHNH----------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~-----~G~i~~~~~----------- 429 (582)
+|+++|++++|++ ..+++|+||+|.+||+++|+|+||||||||+++|+|+++|+ +|+|.+.+.
T Consensus 1 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 1 AIEIENLNLFYGE-KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred CEEEEEEEEEECC-eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 4789999999964 57999999999999999999999999999999999999998 999987542
Q ss_pred --eeEEEechhhhhhcCCcccHHHHHHhc--CCC-----ChHHHHHHHHHhcCCC----CccccCCCCCCChhHHHHHHH
Q 007982 430 --LRIAQFHQHLAEKLDMDMSALQYMIKE--YPG-----NEEEKMRAAIGRFGLT----GKAQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 --~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~l~~~gl~----~~~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|... +.. .++.+++... ... ...+.+.++++.+|+. ... .+++.+|||||||||+|
T Consensus 80 ~~~~i~~v~q~~~--~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSgG~~qrv~l 155 (247)
T TIGR00972 80 LRRRVGMVFQKPN--PFP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRL-HDSALGLSGGQQQRLCI 155 (247)
T ss_pred HHhheEEEecCcc--cCC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHh-hCCcccCCHHHHHHHHH
Confidence 24788888753 333 6777766421 111 1234678899999997 433 45678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ ..|+.+++..
T Consensus 156 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 232 (247)
T TIGR00972 156 ARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELV-EYGPTEQIFT 232 (247)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 99999999999999999999999999999999875 369999999999999999999999999996 5788887753
No 188
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.8e-39 Score=329.36 Aligned_cols=205 Identities=21% Similarity=0.319 Sum_probs=169.0
Q ss_pred CeEEEEEEEEEecC--------CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------
Q 007982 365 PVLQFVEVTFGYTP--------DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~--------~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------- 429 (582)
++|+++|+++.|++ ++++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.
T Consensus 2 ~~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~ 81 (268)
T PRK10419 2 TLLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNR 81 (268)
T ss_pred ceEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccCh
Confidence 47899999999973 367999999999999999999999999999999999999999999987643
Q ss_pred -------eeEEEechhhhhhcCCcccHHHHHHh---cC---CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHH
Q 007982 430 -------LRIAQFHQHLAEKLDMDMSALQYMIK---EY---PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 430 -------~~~~~~~q~~~~~~~~~~~~~~~~~~---~~---~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~ 495 (582)
..++|++|.....+....++.+++.. .+ .. .....+.++++.+|+.......++.+|||||+|||+
T Consensus 82 ~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl~ 161 (268)
T PRK10419 82 AQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRVC 161 (268)
T ss_pred hHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHHH
Confidence 24788888753334344556555421 11 11 123467889999999643334567899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++ ..|+..+.
T Consensus 162 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~ 239 (268)
T PRK10419 162 LARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIV-ETQPVGDK 239 (268)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEe-eeCChhhc
Confidence 999999999999999999999999999998888754 579999999999999999999999999996 47777664
No 189
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.6e-39 Score=327.02 Aligned_cols=201 Identities=24% Similarity=0.366 Sum_probs=168.1
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------------
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------------- 429 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------------- 429 (582)
|+++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+.
T Consensus 1 i~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ 79 (252)
T TIGR03005 1 VRFSDVTKRFGI-LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADE 79 (252)
T ss_pred CEEEEEEEEeCC-eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccch
Confidence 478999999964 67999999999999999999999999999999999999999999976542
Q ss_pred -------eeEEEechhhhhhcCCcccHHHHHHhc------CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHH
Q 007982 430 -------LRIAQFHQHLAEKLDMDMSALQYMIKE------YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 430 -------~~~~~~~q~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~ 495 (582)
..++|++|... +....++.+++... ... ...+.+.++++.+|+..... .++.+|||||+|||+
T Consensus 80 ~~~~~~~~~i~~v~q~~~--~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~LS~G~~qrv~ 156 (252)
T TIGR03005 80 KHLRQMRNKIGMVFQSFN--LFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKAD-HMPAQLSGGQQQRVA 156 (252)
T ss_pred hHHHHHhhCeEEEecCcc--cCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhh-cChhhcCHHHHHHHH
Confidence 23778887642 33456777766431 111 12345788999999976544 456899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ +.|+.+++.
T Consensus 157 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 235 (252)
T TIGR03005 157 IARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV-EQGKPDEIF 235 (252)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHh
Confidence 999999999999999999999999999999988764 579999999999999999999999999996 578887775
Q ss_pred H
Q 007982 572 L 572 (582)
Q Consensus 572 ~ 572 (582)
.
T Consensus 236 ~ 236 (252)
T TIGR03005 236 R 236 (252)
T ss_pred c
Confidence 3
No 190
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-40 Score=320.99 Aligned_cols=199 Identities=28% Similarity=0.400 Sum_probs=154.2
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhcc
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILGA 151 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~ 151 (582)
|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++.... .......+++
T Consensus 1 l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~----~~g~~~~~~~~~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGSVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEIL----IDGRDVTGVPPERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCCeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEE----ECCEEcCcCchhhccEEE
Confidence 5789999999988999999999999999999999999999999999999888765432 2221110 0000111221
Q ss_pred --ccC---CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeec
Q 007982 152 --QED---GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLD 224 (582)
Q Consensus 152 --~~~---~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLD 224 (582)
+.. ......+++..... .........++.++++.+|+.. ..++++.+|||||||||+|||||+.+|++||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrl~la~al~~~p~~lllD 155 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEG-LLNRYPHELSGGQQQRVALARALAREPSLLLLD 155 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChh-hhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 111 11122333321111 1223344567889999999974 568899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 225 EPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 225 EPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
|||++||+.++.++.++|+++ +.|||++|||++++..+||++++|++|+++.
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~ 211 (213)
T cd03259 156 EPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQ 211 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 999999999999999999764 6799999999999999999999999999863
No 191
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=322.21 Aligned_cols=201 Identities=28% Similarity=0.425 Sum_probs=169.1
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEec
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFH 436 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~ 436 (582)
+|+++|++++|++ . ..++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++
T Consensus 1 ~l~~~~l~~~~~~-~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~ 77 (232)
T PRK10771 1 MLKLTDITWLYHH-L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSMLF 77 (232)
T ss_pred CeEEEEEEEEECC-c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEEe
Confidence 4789999999964 3 24999999999999999999999999999999999999999987653 2478888
Q ss_pred hhhhhhcCCcccHHHHHHhcC-CC-----ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 007982 437 QHLAEKLDMDMSALQYMIKEY-PG-----NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLD 510 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 510 (582)
|... +....++.+++.... .. ...+++.++++.+|+.... ++++.+|||||+|||+||||++.+|++||||
T Consensus 78 q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~lllLD 154 (232)
T PRK10771 78 QENN--LFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLL-ARLPGQLSGGQRQRVALARCLVREQPILLLD 154 (232)
T ss_pred cccc--cccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHH-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 8753 334467777764321 11 1245688899999997654 4566899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 511 EPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 511 EPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
|||+|||+.++..+.+.|.++ +.|||+||||++++.++||++++|++|++. +.|+.+++...
T Consensus 155 EP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~-~~g~~~~~~~~ 220 (232)
T PRK10771 155 EPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIA-WDGPTDELLSG 220 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHhC
Confidence 999999999999999988764 569999999999999999999999999996 58998887754
No 192
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=343.58 Aligned_cols=188 Identities=26% Similarity=0.312 Sum_probs=159.9
Q ss_pred eeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------------eeEEEechhhhhhcCC
Q 007982 381 LIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------------LRIAQFHQHLAEKLDM 445 (582)
Q Consensus 381 ~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------------~~~~~~~q~~~~~~~~ 445 (582)
.+|+|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|... +..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~--l~~ 119 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA--LMP 119 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc--CCC
Confidence 4899999999999999999999999999999999999999999987542 25889999753 445
Q ss_pred cccHHHHHHhc-----CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHH
Q 007982 446 DMSALQYMIKE-----YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIE 519 (582)
Q Consensus 446 ~~~~~~~~~~~-----~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~ 519 (582)
..|+.+++... +.. ...+++.++++.+||.+... +++.+|||||||||+|||||+.+|++|||||||++||+.
T Consensus 120 ~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~-~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~ 198 (400)
T PRK10070 120 HMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAH-SYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPL 198 (400)
T ss_pred CCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhh-cCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHH
Confidence 56887776532 111 12356788999999987554 456899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 520 TIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 520 ~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ ..|+++++..
T Consensus 199 ~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~-~~g~~~~l~~ 254 (400)
T PRK10070 199 IRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVV-QVGTPDEILN 254 (400)
T ss_pred HHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEE-ecCCHHHHHh
Confidence 999999988764 579999999999999999999999999996 4788877654
No 193
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-39 Score=330.00 Aligned_cols=203 Identities=21% Similarity=0.326 Sum_probs=168.1
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~ 433 (582)
+|+++|+++.|++.+.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..++
T Consensus 1 ml~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 1 MIRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred CEEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 4789999999964456999999999999999999999999999999999999999999977542 2378
Q ss_pred EechhhhhhcCCcccHHHHHHhc---C--CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKE---Y--PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~---~--~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
|++|.+...+ ...++.+++... . .. ...+.+.++++.+|+..... .++..|||||+|||+|||||+.+|+||
T Consensus 81 ~v~q~~~~~~-~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~LS~G~~qrv~laral~~~p~ll 158 (274)
T PRK13644 81 IVFQNPETQF-VGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRH-RSPKTLSGGQGQCVALAGILTMEPECL 158 (274)
T ss_pred EEEEChhhhc-ccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhc-CCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 8888753222 345777766421 1 11 12345788899999976544 567899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||||+|||+.++..+.+.|+++ +.|||++|||++++ ..||+|++|++|+++ +.|+.+++..
T Consensus 159 lLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~-~~~d~v~~l~~G~i~-~~g~~~~~~~ 224 (274)
T PRK13644 159 IFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEEL-HDADRIIVMDRGKIV-LEGEPENVLS 224 (274)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHH-hhCCEEEEEECCEEE-EECCHHHHhc
Confidence 999999999999999999998764 57999999999999 469999999999996 5788877644
No 194
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=341.40 Aligned_cols=208 Identities=23% Similarity=0.338 Sum_probs=166.1
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILG 150 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 150 (582)
+|+++||++.|+++.+|+|+||+|++||+++|+|||||||||||++|+|+.+++.|.+ .+++..+. .......++
T Consensus 6 ~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I----~~~g~~i~~~~~~~r~ig 81 (351)
T PRK11432 6 FVVLKNITKRFGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQI----FIDGEDVTHRSIQQRDIC 81 (351)
T ss_pred EEEEEeEEEEECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEE----EECCEECCCCCHHHCCEE
Confidence 7999999999999999999999999999999999999999999999999999886643 22221110 000111222
Q ss_pred --cccC---CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceee
Q 007982 151 --AQED---GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLL 223 (582)
Q Consensus 151 --~~~~---~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlL 223 (582)
+|.. +.....+++...+. ..+..+..+++.++++.+|+.+ +.++++.+|||||||||+|||||+.+|++|||
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~-~~~r~~~~LSgGq~QRVaLARaL~~~P~lLLL 160 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAG-FEDRYVDQISGGQQQRVALARALILKPKVLLF 160 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCch-hhcCChhhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 2221 12244555543332 3445566788999999999975 67899999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 224 DEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 224 DEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||++||+..+.++.+.|+++ +.|+|+||||++++..+||+|++|++|+++. .|+++++.
T Consensus 161 DEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~-~g~~~~~~ 225 (351)
T PRK11432 161 DEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQ-IGSPQELY 225 (351)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 9999999999999999888654 6899999999999999999999999999975 56766543
No 195
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=325.39 Aligned_cols=204 Identities=22% Similarity=0.271 Sum_probs=170.3
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc----------
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH---------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~---------- 429 (582)
++|+++|++++|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+.+.
T Consensus 2 ~~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 2 NKIEIRDLKVSFGQ-VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred ceEEEEeeEEEECC-eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 46899999999964 5799999999999999999999999999999999999974 6999987652
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhcC---C--CC---hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHHH
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKEY---P--GN---EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~~---~--~~---~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~lA 497 (582)
..++|++|... +....++.+++.... . .. ..+.+.++++.+|+... ..+.++.+|||||||||+||
T Consensus 81 ~~~i~~v~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~la 158 (250)
T PRK14247 81 RRRVQMVFQIPN--PIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIA 158 (250)
T ss_pred hccEEEEeccCc--cCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHH
Confidence 24788888753 334567777764211 1 11 13457889999998531 23456789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|++. ..|+.+++..
T Consensus 159 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 234 (250)
T PRK14247 159 RALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIV-EWGPTREVFT 234 (250)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEE-EECCHHHHHc
Confidence 9999999999999999999999999999999875 478999999999999999999999999996 5788888753
No 196
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=333.66 Aligned_cols=214 Identities=20% Similarity=0.337 Sum_probs=163.5
Q ss_pred ceEEeeeEEEECCe-----eeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeee-echHH-------
Q 007982 72 DIRIESLSVTFHGH-----DLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVI-SCDEE------- 138 (582)
Q Consensus 72 ~i~v~nls~~y~~~-----~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i-~~~~~------- 138 (582)
.|+++||+++|++. .+|+|+||+|++||+++|+||||||||||+++|+|+.+|+.|.+...- .....
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 48999999999753 599999999999999999999999999999999999988766542210 00000
Q ss_pred ---------------HHHHHHHHHHhc--cccCC----CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhc
Q 007982 139 ---------------RLKLEKEAEILG--AQEDG----GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAK 195 (582)
Q Consensus 139 ---------------~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~ 195 (582)
..........++ +|.+. .....+++..... ..+.....+++.++++.+||.....++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~ 161 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQR 161 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhC
Confidence 000111122233 23211 1123333322221 234456677899999999996446789
Q ss_pred cCCCCChhHHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCC
Q 007982 196 KTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNK 272 (582)
Q Consensus 196 ~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G 272 (582)
++.+|||||||||+|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||||++|++|
T Consensus 162 ~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G 241 (305)
T PRK13651 162 SPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDG 241 (305)
T ss_pred ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999998765 679999999999999999999999999
Q ss_pred eEEEEcCChhHHHH
Q 007982 273 QLKFYTGNFDQYVQ 286 (582)
Q Consensus 273 ~i~~~~g~~~~~~~ 286 (582)
+++ +.|+.+++..
T Consensus 242 ~i~-~~g~~~~~~~ 254 (305)
T PRK13651 242 KII-KDGDTYDILS 254 (305)
T ss_pred EEE-EECCHHHHhc
Confidence 997 4577666543
No 197
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.3e-39 Score=360.61 Aligned_cols=206 Identities=29% Similarity=0.435 Sum_probs=175.6
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcC
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLD 444 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~ 444 (582)
.+|+++|++++|++++++|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.+...++|++|.+. +.
T Consensus 3 ~~i~~~nls~~~~~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~--~~ 80 (552)
T TIGR03719 3 YIYTMNRVSKVVPPKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQ--LD 80 (552)
T ss_pred EEEEEeeEEEecCCCCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCC--CC
Confidence 5799999999996346799999999999999999999999999999999999999999998876667999999863 33
Q ss_pred CcccHHHHHHhcC-------------------CCCh-----------------------HHHHHHHHHhcCCCCccccCC
Q 007982 445 MDMSALQYMIKEY-------------------PGNE-----------------------EEKMRAAIGRFGLTGKAQVMP 482 (582)
Q Consensus 445 ~~~~~~~~~~~~~-------------------~~~~-----------------------~~~~~~~l~~~gl~~~~~~~~ 482 (582)
...|+.+++.... +..+ ..++.++++.+|+.. . +++
T Consensus 81 ~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~-~~~ 158 (552)
T TIGR03719 81 PTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCPP-W-DAD 158 (552)
T ss_pred CCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCCc-c-cCc
Confidence 3456665543210 0010 134566788888853 2 467
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 483 MKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 483 ~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
+.+|||||||||+|||+|+.+|++|||||||+|||+.++..+.+.|+++++|||+||||++++..+||+|++|++|+++.
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~~~tvIiisHd~~~~~~~~d~v~~l~~g~i~~ 238 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEYPGTVVAVTHDRYFLDNVAGWILELDRGRGIP 238 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhCCCeEEEEeCCHHHHHhhcCeEEEEECCEEEE
Confidence 89999999999999999999999999999999999999999999999998899999999999999999999999999877
Q ss_pred EcCCHHHHHHHH
Q 007982 563 WEGDIMDFKLHL 574 (582)
Q Consensus 563 ~~g~~~~~~~~~ 574 (582)
+.|++++|.+..
T Consensus 239 ~~g~~~~~~~~~ 250 (552)
T TIGR03719 239 WEGNYSSWLEQK 250 (552)
T ss_pred ecCCHHHHHHHH
Confidence 899999987653
No 198
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.3e-39 Score=326.68 Aligned_cols=201 Identities=29% Similarity=0.374 Sum_probs=170.3
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEEe
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQF 435 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~~ 435 (582)
|+++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|+
T Consensus 2 l~~~~l~~~~~~-~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (256)
T TIGR03873 2 LRLSRVSWSAGG-RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVALV 80 (256)
T ss_pred ceEEeEEEEECC-EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEEe
Confidence 579999999964 67999999999999999999999999999999999999999999987652 137888
Q ss_pred chhhhhhcCCcccHHHHHHhcC---------CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 436 HQHLAEKLDMDMSALQYMIKEY---------PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
+|.+. +....++.+++.... .. ...+++.++++.+|+.... +.++.+|||||+|||+||||++.+|+
T Consensus 81 ~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~ 157 (256)
T TIGR03873 81 EQDSD--TAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLA-DRDMSTLSGGERQRVHVARALAQEPK 157 (256)
T ss_pred cccCc--cCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhh-cCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 88753 334567777764321 11 1234678899999997544 45678999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|||||||+|||+.++..+.+.|+++ +.|||++|||++++..+||+|++|++|+++ +.|+.+++..
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 226 (256)
T TIGR03873 158 LLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVV-AAGPPREVLT 226 (256)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEE-EecCHHHhhC
Confidence 99999999999999999999998876 579999999999999999999999999997 5788887644
No 199
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-40 Score=316.19 Aligned_cols=210 Identities=25% Similarity=0.358 Sum_probs=167.9
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHH-
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAE- 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~- 147 (582)
.+++++|+++||+-.+++||||++++||+++||||||||||||+|+|+|+++|+.|.+ .+.+..+ ...+...
T Consensus 4 lL~v~~l~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v----~~~G~~it~l~p~~iar~ 79 (250)
T COG0411 4 LLEVRGLSKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTV----IFRGRDITGLPPHRIARL 79 (250)
T ss_pred eeeeccceeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceE----EECCcccCCCCHHHHHhc
Confidence 5889999999999999999999999999999999999999999999999999986653 2222211 1111110
Q ss_pred Hhc--ccc---CCCcchHHHHHHHHH---------cC-----ChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHH
Q 007982 148 ILG--AQE---DGGGEQLERVYERLE---------AL-----DASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRI 208 (582)
Q Consensus 148 ~~~--~~~---~~~~~~~~~~~~~l~---------~~-----~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv 208 (582)
-+. +|. ....++++++.-... .. ...+..+++.++|+.+||.+ ..+.+..+||+|||+|+
T Consensus 80 Gi~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~-~a~~~A~~LsyG~qR~L 158 (250)
T COG0411 80 GIARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGE-LADRPAGNLSYGQQRRL 158 (250)
T ss_pred cceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCch-hhcchhhcCChhHhHHH
Confidence 011 121 122344555432211 01 23566788999999999985 57899999999999999
Q ss_pred HHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 209 ALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 209 ~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
.|||||+.+|++||||||.+||.+.....+.++|+++ +.||++|.||++++.++||||+||+.|+++ ..|++++.
T Consensus 159 EIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~I-AeG~P~eV 237 (250)
T COG0411 159 EIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVI-AEGTPEEV 237 (250)
T ss_pred HHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCc-ccCCHHHH
Confidence 9999999999999999999999999999999998765 479999999999999999999999999987 57999887
Q ss_pred HHh
Q 007982 285 VQT 287 (582)
Q Consensus 285 ~~~ 287 (582)
..+
T Consensus 238 ~~d 240 (250)
T COG0411 238 RNN 240 (250)
T ss_pred hcC
Confidence 654
No 200
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2e-39 Score=320.46 Aligned_cols=198 Identities=28% Similarity=0.398 Sum_probs=167.4
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------eeEEEechhh
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------LRIAQFHQHL 439 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------~~~~~~~q~~ 439 (582)
|+++|+++.|++ +.+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|..
T Consensus 1 l~l~~v~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q~~ 79 (223)
T TIGR03740 1 LETKNLSKRFGK-QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIESP 79 (223)
T ss_pred CEEEeEEEEECC-EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcCCC
Confidence 478999999964 67999999999999999999999999999999999999999999987653 2577888864
Q ss_pred hhhcCCcccHHHHHHhc--CCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCC
Q 007982 440 AEKLDMDMSALQYMIKE--YPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLD 517 (582)
Q Consensus 440 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD 517 (582)
. +....++.+++... .......++.++++.+|+.+... .++.+|||||+|||+||||++.+|++|||||||+|||
T Consensus 80 ~--~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD 156 (223)
T TIGR03740 80 P--LYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGK-KKAKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLD 156 (223)
T ss_pred C--ccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHh-hhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCC
Confidence 3 33445777765421 11223457889999999986544 5668999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHH
Q 007982 518 IETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMD 569 (582)
Q Consensus 518 ~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 569 (582)
+.++..+.+.|.++ +.|||++|||++++.++||+|++|++|++.. .|++.+
T Consensus 157 ~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~~~ 210 (223)
T TIGR03740 157 PIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGY-QGKINK 210 (223)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEE-ecChhh
Confidence 99999999998765 4689999999999999999999999999974 676654
No 201
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2e-39 Score=334.75 Aligned_cols=207 Identities=23% Similarity=0.328 Sum_probs=161.7
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH--HHHHHHHHh
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL--KLEKEAEIL 149 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~ 149 (582)
+|+++||+++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++... ........+
T Consensus 4 ~i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~----~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKIT----VLGEPVPSRARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEECcccHHHHhhcE
Confidence 69999999999998999999999999999999999999999999999999988765432 221110 001111223
Q ss_pred cc--ccCC---CcchHHHHHH--HHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 150 GA--QEDG---GGEQLERVYE--RLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 150 ~~--~~~~---~~~~~~~~~~--~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
++ +... .....+++.. .....+......++.++++.+++.+ ..++++.+|||||||||+|||||+.+|++||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~-~~~~~~~~LSgG~~qrv~la~al~~~p~lll 158 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-KADVRVALLSGGMKRRLTLARALINDPQLLI 158 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChh-HhcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 22 2211 1233333321 1222333444567788999999974 5688999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 223 LDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||||+|||+.++.++.+.|+++ +.|||++|||++++..+||++++|++|+++ +.|+.+++
T Consensus 159 LDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 222 (303)
T TIGR01288 159 LDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKI-AEGRPHAL 222 (303)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE-EEcCHHHH
Confidence 99999999999999999999876 679999999999999999999999999996 45666554
No 202
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.5e-40 Score=319.67 Aligned_cols=197 Identities=25% Similarity=0.430 Sum_probs=150.6
Q ss_pred EEeeeEEEECC-eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhccc
Q 007982 74 RIESLSVTFHG-HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILGAQ 152 (582)
Q Consensus 74 ~v~nls~~y~~-~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (582)
+++|++++|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+|+.|.+ .+++...........+++.
T Consensus 1 ~~~~l~~~~~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i----~~~g~~~~~~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKGTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSI----LLNGKPIKAKERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCcCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEE----EECCEEhhhHHhhcceEEE
Confidence 36899999987 889999999999999999999999999999999999998876543 2222211101111122221
Q ss_pred cCCC--cchHHHHHHHHHcC--ChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCCCC
Q 007982 153 EDGG--GEQLERVYERLEAL--DASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTN 228 (582)
Q Consensus 153 ~~~~--~~~~~~~~~~l~~~--~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~ 228 (582)
++.. ......+.+.+... .......++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~ 155 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYA-LKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTS 155 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCch-hcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCc
Confidence 1111 00011222222110 01112357889999999975 5688999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEE
Q 007982 229 HLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLK 275 (582)
Q Consensus 229 ~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~ 275 (582)
+||+.++..+.++|+++ +.|+|++|||++++..+||++++|++|+++
T Consensus 156 ~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 156 GLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999776 679999999999999999999999999873
No 203
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-39 Score=325.35 Aligned_cols=205 Identities=20% Similarity=0.267 Sum_probs=168.8
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc--------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH-------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~-------- 429 (582)
..++|+++|+++.|+ ++.+|+|+||+|.+|+++||+|+||||||||+++|+|+++| ++|+|.+.+.
T Consensus 9 ~~~~l~~~~l~~~~~-~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 9 AQPQIKVENLNLWYG-EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred cceeEEEeeeEEEeC-CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 356899999999996 46799999999999999999999999999999999999985 7999976442
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhc---CCCC---hHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKE---YPGN---EEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 495 (582)
..++|++|... +. ..++.+++... .... ..+.+.++++.+|+.. ...+.++.+|||||+|||+
T Consensus 88 ~~~~~~~i~~v~q~~~--~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~ 164 (258)
T PRK14268 88 VVELRKNVGMVFQKPN--PF-PMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLC 164 (258)
T ss_pred HHHHhhhEEEEecCCc--cC-cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHH
Confidence 13778888743 22 25777766421 1111 1235778899998842 1234567899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|+++ +.|+++++.+
T Consensus 165 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 242 (258)
T PRK14268 165 IARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELI-EFGQTRQIFH 242 (258)
T ss_pred HHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 999999999999999999999999999999998875 479999999999999999999999999996 5788887753
No 204
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-39 Score=319.95 Aligned_cols=203 Identities=22% Similarity=0.374 Sum_probs=157.3
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH--HHHHHHHHhc
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL--KLEKEAEILG 150 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~ 150 (582)
|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++... ........++
T Consensus 1 i~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~----~~g~~~~~~~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGDFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRAT----VAGHDVVREPREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECCEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEecCcChHHHhhcEE
Confidence 5789999999999999999999999999999999999999999999999888765432 221111 0011112222
Q ss_pred c--ccCC---CcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceee
Q 007982 151 A--QEDG---GGEQLERVYER--LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLL 223 (582)
Q Consensus 151 ~--~~~~---~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlL 223 (582)
+ +... .....+++... ...........++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++|||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qr~~la~al~~~p~llll 155 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLE-AADRLVKTYSGGMRRRLEIARSLVHRPEVLFL 155 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHH-HhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 2 2111 11223333221 112333445667899999999974 56889999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCCh
Q 007982 224 DEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNF 281 (582)
Q Consensus 224 DEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 281 (582)
||||++||+.++..+.++|.++ +.|||++|||++++..+||++++|++|+++. .|+.
T Consensus 156 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~-~~~~ 216 (220)
T cd03265 156 DEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIA-EGTP 216 (220)
T ss_pred cCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-eCCh
Confidence 9999999999999999988764 6799999999999999999999999999974 3443
No 205
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-39 Score=329.80 Aligned_cols=204 Identities=22% Similarity=0.330 Sum_probs=169.0
Q ss_pred CeEEEEEEEEEecC-----CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------
Q 007982 365 PVLQFVEVTFGYTP-----DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~-----~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------- 429 (582)
++|+++|++++|++ .+++|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+.+.
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~ 82 (280)
T PRK13633 3 EMIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWD 82 (280)
T ss_pred ceEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHH
Confidence 57999999999963 246999999999999999999999999999999999999999999987642
Q ss_pred --eeEEEechhhhhhcCCcccHHHHHHhc-----CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc
Q 007982 430 --LRIAQFHQHLAEKLDMDMSALQYMIKE-----YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 430 --~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
..++|++|.+...+. ..++.+++... ... ...+.+.++++.+||..... +++.+|||||+|||+|||+|+
T Consensus 83 ~~~~i~~v~q~~~~~~~-~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-~~~~~LS~G~~qrv~laral~ 160 (280)
T PRK13633 83 IRNKAGMVFQNPDNQIV-ATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRR-HAPHLLSGGQKQRVAIAGILA 160 (280)
T ss_pred HhhheEEEecChhhhhc-cccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhh-CCcccCCHHHHHHHHHHHHHH
Confidence 137888887532222 23555554321 111 12356788999999986554 566899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++.. ||++++|++|+++ ..|+.+++..
T Consensus 161 ~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~-~~g~~~~~~~ 233 (280)
T PRK13633 161 MRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGKVV-MEGTPKEIFK 233 (280)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCEEE-EecCHHHHhc
Confidence 999999999999999999999999998765 5699999999999976 9999999999997 4788888754
No 206
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-39 Score=330.21 Aligned_cols=214 Identities=24% Similarity=0.332 Sum_probs=163.5
Q ss_pred ceEEeeeEEEECC-----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechH--HHHHHH
Q 007982 72 DIRIESLSVTFHG-----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDE--ERLKLE 143 (582)
Q Consensus 72 ~i~v~nls~~y~~-----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~--~~~~~~ 143 (582)
||+++|++++|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+... ..... ......
T Consensus 1 mi~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 1 MIKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred CEEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 5899999999973 259999999999999999999999999999999999998876643210 01100 000111
Q ss_pred HHHHHhc--cccCC----CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHh
Q 007982 144 KEAEILG--AQEDG----GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALF 215 (582)
Q Consensus 144 ~~~~~~~--~~~~~----~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~ 215 (582)
.....++ ++.+. .....+++..... ..+..+.+.++.++++.+|+.....++++.+|||||||||+|||||+
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA~aL~ 160 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIAGILA 160 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCCcccCCHHHHHHHHHHHHHH
Confidence 1122233 22211 1123333322222 23345566788999999999644568899999999999999999999
Q ss_pred cCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 216 INPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 216 ~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++++..
T Consensus 161 ~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 233 (288)
T PRK13643 161 MEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHII-SCGTPSDVFQ 233 (288)
T ss_pred hCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EECCHHHHHc
Confidence 999999999999999999999999998764 679999999999999999999999999997 4678777654
No 207
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-39 Score=338.78 Aligned_cols=200 Identities=20% Similarity=0.257 Sum_probs=169.2
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------------e
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------------L 430 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------------~ 430 (582)
||++ |++++|++ +. + |+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. .
T Consensus 1 ~l~~-~l~k~~~~-~~-~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 1 MLEL-NFKQQLGD-LC-L-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred CeEE-EEEEEeCC-EE-E-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 4677 99999964 33 3 899999999999999999999999999999999999999976441 2
Q ss_pred eEEEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 007982 431 RIAQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLD 510 (582)
Q Consensus 431 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 510 (582)
.++|++|... +.+..++.+++.........+++.++++.+|+.+... +++.+|||||||||+|||||+.+|++||||
T Consensus 77 ~i~~v~q~~~--l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~-~~~~~LSgGq~qRvalaraL~~~p~llLLD 153 (352)
T PRK11144 77 RIGYVFQDAR--LFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLD-RYPGSLSGGEKQRVAIGRALLTAPELLLMD 153 (352)
T ss_pred CEEEEcCCcc--cCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhh-CCcccCCHHHHHHHHHHHHHHcCCCEEEEc
Confidence 4788888753 4456788888754332233457889999999986554 556899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 511 EPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 511 EPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
|||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|++. ..|+++++...
T Consensus 154 EPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~i~~~ 219 (352)
T PRK11144 154 EPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVK-AFGPLEEVWAS 219 (352)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEE-EecCHHHHHhC
Confidence 999999999999999888764 579999999999999999999999999997 47888887653
No 208
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-39 Score=328.11 Aligned_cols=204 Identities=22% Similarity=0.262 Sum_probs=166.1
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------eeEEEec
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------LRIAQFH 436 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------~~~~~~~ 436 (582)
.+|+++|++++|++++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++
T Consensus 5 ~~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~i~~v~ 84 (272)
T PRK15056 5 AGIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQALQKNLVAYVP 84 (272)
T ss_pred ceEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHHhhccceEEEec
Confidence 36899999999964467999999999999999999999999999999999999999999987652 2488998
Q ss_pred hhhhhhcCCcccHHHHHHhc---------CCC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 007982 437 QHLAEKLDMDMSALQYMIKE---------YPG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHM 506 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~l 506 (582)
|..........++.+++... .+. ...+.+.++++.+|+.... ++++.+|||||+|||+|||||+.+|++
T Consensus 85 q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgG~~qrv~laraL~~~p~l 163 (272)
T PRK15056 85 QSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFR-HRQIGELSGGQKKRVFLARAIAQQGQV 163 (272)
T ss_pred cccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHh-cCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 87532111222333332110 011 1234577889999997654 456789999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 507 LLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 507 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||+++++ +|++. ..|+.+++.
T Consensus 164 lllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~-~~g~~~~~~ 229 (272)
T PRK15056 164 ILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVL-ASGPTETTF 229 (272)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEE-eecCHHhcc
Confidence 9999999999999999999999775 579999999999999999999877 89986 478887753
No 209
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=341.51 Aligned_cols=208 Identities=22% Similarity=0.338 Sum_probs=164.7
Q ss_pred ceEEeeeEEEE-CCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-HHHHHHHHh
Q 007982 72 DIRIESLSVTF-HGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-KLEKEAEIL 149 (582)
Q Consensus 72 ~i~v~nls~~y-~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 149 (582)
+|+++|++++| +++.+|+|+||+|++|++++|+|||||||||||++|+|+.+++.|.+ .+++... ........+
T Consensus 3 ~l~i~~l~~~~~~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I----~~~g~~i~~~~~~~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDGKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEI----WIGGRVVNELEPADRDI 78 (356)
T ss_pred EEEEEeEEEEeCCCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEE----EECCEECCCCCHHHCCE
Confidence 69999999999 77899999999999999999999999999999999999999886643 2222111 000011122
Q ss_pred c--cccC---CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 150 G--AQED---GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 150 ~--~~~~---~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
+ +|.. +.....+++...+. ..+..+...++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~LSgGq~QRvalARAL~~~P~llL 157 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEP-LLDRKPRELSGGQRQRVAMGRAIVREPAVFL 157 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChh-HhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 2 2221 12234445433332 2344556678999999999974 6789999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 223 LDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|+++. .|+++++.
T Consensus 158 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~-~g~~~~~~ 223 (356)
T PRK11650 158 FDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQ-IGTPVEVY 223 (356)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEE-ECCHHHHH
Confidence 99999999999999999888654 6799999999999999999999999999974 57766654
No 210
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-39 Score=316.66 Aligned_cols=190 Identities=25% Similarity=0.367 Sum_probs=160.8
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEech
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFHQ 437 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~q 437 (582)
|+++|++++|++ +. .|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..++|++|
T Consensus 1 i~~~~l~~~~~~-~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 77 (211)
T cd03298 1 VRLDKIRFSYGE-QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSMLFQ 77 (211)
T ss_pred CEEEeEEEEeCC-Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEEec
Confidence 468999999964 33 3999999999999999999999999999999999999999987652 24789998
Q ss_pred hhhhhcCCcccHHHHHHhcCC------CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 438 HLAEKLDMDMSALQYMIKEYP------GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
... +....++.+++..... ....+++.++++.+|+..... .++.+|||||||||+|||||+.+|++|||||
T Consensus 78 ~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~qrv~ia~al~~~p~llllDE 154 (211)
T cd03298 78 ENN--LFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEK-RLPGELSGGERQRVALARVLVRDKPVLLLDE 154 (211)
T ss_pred ccc--cCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHh-CCcccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 753 3345678777643211 113456788999999986544 5668999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 512 PTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|+++.
T Consensus 155 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 209 (211)
T cd03298 155 PFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAA 209 (211)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEee
Confidence 99999999999999998764 5799999999999999999999999999863
No 211
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.9e-39 Score=340.12 Aligned_cols=208 Identities=25% Similarity=0.373 Sum_probs=166.1
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILG 150 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 150 (582)
+|+++||+++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+.+|+.|.+. +++.... .......++
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~----i~g~~~~~~~~~~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIY----QGGRDITRLPPQKRDYG 79 (353)
T ss_pred EEEEEEEEEEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEE----ECCEECCCCCHHHCCEE
Confidence 69999999999999999999999999999999999999999999999999998866432 2221110 001111222
Q ss_pred --cccC---CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceee
Q 007982 151 --AQED---GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLL 223 (582)
Q Consensus 151 --~~~~---~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlL 223 (582)
+|.. +.....+++...+. ..+..+.+.++.++++.+||.+ +.++++.+|||||||||+|||||+.+|++|||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~-~~~~~~~~LSgGq~QRvaLARaL~~~P~llLL 158 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPG-SERKYPGQLSGGQQQRVALARALATSPGLLLL 158 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCc-hhhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 2222 12244455543332 2345566788999999999975 67899999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 224 DEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 224 DEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||++||+.++.++.+.|+++ +.|+|+||||++++..+||+|++|++|+++. .|+++++.
T Consensus 159 DEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~-~g~~~~~~ 223 (353)
T TIGR03265 159 DEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQ-VGTPQEIY 223 (353)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 9999999999999999888654 6899999999999999999999999999975 56666554
No 212
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-39 Score=327.21 Aligned_cols=206 Identities=22% Similarity=0.345 Sum_probs=170.5
Q ss_pred CCCeEEEEEEEEEec-CCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------e
Q 007982 363 PPPVLQFVEVTFGYT-PDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------L 430 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~-~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~ 430 (582)
+.++|+++|+++.|+ +++++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. .
T Consensus 4 ~~~~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 83 (271)
T PRK13632 4 KSVMIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRK 83 (271)
T ss_pred cceEEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhc
Confidence 356899999999996 2457999999999999999999999999999999999999999999987542 2
Q ss_pred eEEEechhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCC
Q 007982 431 RIAQFHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 431 ~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 504 (582)
.++|++|.... ..+..|+.+++... +... ....+.++++.+|+.+... +++.+|||||+|||+|||||+.+|
T Consensus 84 ~i~~v~q~~~~-~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~qrl~laral~~~p 161 (271)
T PRK13632 84 KIGIIFQNPDN-QFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLD-KEPQNLSGGQKQRVAIASVLALNP 161 (271)
T ss_pred ceEEEEeCHHH-hcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-CCcccCCHHHHHHHHHHHHHHcCC
Confidence 47888887532 22346777776431 1111 1235778899999986554 556899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++|||||||+|||+.++..+.+.|+++ +.|||++|||++++. .||++++|++|++. ..|+.+++..
T Consensus 162 ~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~-~~g~~~~~~~ 231 (271)
T PRK13632 162 EIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLI-AQGKPKEILN 231 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEE-EecCHHHHhc
Confidence 999999999999999999999999875 369999999999995 79999999999996 4777776543
No 213
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-39 Score=323.60 Aligned_cols=204 Identities=25% Similarity=0.267 Sum_probs=168.4
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc----------
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH---------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~---------- 429 (582)
++|+++|+++.|++ +++|+|+||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+.+.
T Consensus 3 ~~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 3 FAIETVNLRVYYGS-NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred ceEEEEeEEEEeCC-eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 47999999999964 5799999999999999999999999999999999999987 4999987542
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc--C-C---CC--hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE--Y-P---GN--EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~--~-~---~~--~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~ 495 (582)
..++|++|... +....++.+++... . . .. ....+.++++.+|+... ....++.+|||||||||+
T Consensus 82 ~~~~~i~~~~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 159 (253)
T PRK14267 82 EVRREVGMVFQYPN--PFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLV 159 (253)
T ss_pred HHhhceeEEecCCc--cCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHHH
Confidence 24778888743 33445777766421 1 1 11 12456788999998531 234567899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ ..|+++++..
T Consensus 160 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 237 (253)
T PRK14267 160 IARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLI-EVGPTRKVFE 237 (253)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 999999999999999999999999999999999876 479999999999999999999999999997 4788887753
No 214
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-39 Score=323.64 Aligned_cols=204 Identities=20% Similarity=0.266 Sum_probs=169.0
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~--------- 429 (582)
.++|+++|+++.|++ ..+|+|+||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+.+.
T Consensus 5 ~~~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 5 EAIIETENLNLFYTD-FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred CceEEEeeeEEEeCC-ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 468999999999964 5799999999999999999999999999999999999997 4899986542
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhc---CC--CC--hHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKE---YP--GN--EEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~--~~--~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 495 (582)
..++|++|... + +..++.+++... .. .. ..+.+.++++.+++.. ...++++.+|||||||||+
T Consensus 84 ~~~~~~i~~v~q~~~--~-~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~ 160 (254)
T PRK14273 84 LELRRKIGMVFQTPN--P-FLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLC 160 (254)
T ss_pred HHHhhceEEEeeccc--c-ccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHH
Confidence 23788888753 2 236777766421 11 11 2345778888888731 1224567899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||+|+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ ..|+..++..
T Consensus 161 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 238 (254)
T PRK14273 161 IARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIE-EESSTDELFF 238 (254)
T ss_pred HHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 999999999999999999999999999999999876 469999999999999999999999999997 4788888754
No 215
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.8e-40 Score=312.10 Aligned_cols=207 Identities=25% Similarity=0.417 Sum_probs=181.4
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------eeEEEechh
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------LRIAQFHQH 438 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------~~~~~~~q~ 438 (582)
.|++++|+++|+ ++.+++|+||+|++|++.|++|||||||||.+|+|.|++.|++|+|.+.+. .+|||+|..
T Consensus 2 ~L~ie~vtK~Fg-~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G~I~~~g~~~~~~~~~rIGyLPEE 80 (300)
T COG4152 2 ALEIEGVTKSFG-DKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEGEITWNGGPLSQEIKNRIGYLPEE 80 (300)
T ss_pred ceEEecchhccC-ceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCceEEEcCcchhhhhhhhcccChhh
Confidence 589999999996 578999999999999999999999999999999999999999999999874 368999887
Q ss_pred hhhhcCCcccHHHHHHh-----cCCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCC
Q 007982 439 LAEKLDMDMSALQYMIK-----EYPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEP 512 (582)
Q Consensus 439 ~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 512 (582)
. .+...+++.+.+.. .++.. ...++..+|+++++.+.. .+++.+||-|++|++.|..+++++|++||||||
T Consensus 81 R--GLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~~-~~kIk~LSKGnqQKIQfisaviHePeLlILDEP 157 (300)
T COG4152 81 R--GLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGKK-TKKIKELSKGNQQKIQFISAVIHEPELLILDEP 157 (300)
T ss_pred h--ccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccc-cchHHHhhhhhhHHHHHHHHHhcCCCEEEecCC
Confidence 4 46677888776532 23332 245688999999998765 467899999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHHHHH
Q 007982 513 TNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHLKAK 577 (582)
Q Consensus 513 t~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~~~ 577 (582)
+|||||.+.+.|.+++.++ |.|||++||.|+-++++||++++|+.|+.+ .+|+..+.+....++
T Consensus 158 FSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V-~~G~v~~ir~~~Gkk 224 (300)
T COG4152 158 FSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTV-LYGTVEDIRRSFGKK 224 (300)
T ss_pred ccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceE-EeccHHHHHHhcCCc
Confidence 9999999999999987664 789999999999999999999999999986 699999998865553
No 216
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-39 Score=329.39 Aligned_cols=209 Identities=22% Similarity=0.316 Sum_probs=162.3
Q ss_pred ceEEeeeEEEECC-----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------
Q 007982 72 DIRIESLSVTFHG-----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------ 140 (582)
Q Consensus 72 ~i~v~nls~~y~~-----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------ 140 (582)
.|+++||+++|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+.+++.|.+. +++...
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~i~~~~~~ 77 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVT----IGERVITAGKKN 77 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEE----ECCEECcccccc
Confidence 3899999999974 5699999999999999999999999999999999999988766432 222111
Q ss_pred -HHHHHHHHhc--cccCC----CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHH
Q 007982 141 -KLEKEAEILG--AQEDG----GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 141 -~~~~~~~~~~--~~~~~----~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LA 211 (582)
........++ ++.+. .....+++..... ..+......++.++++.+||.....++++.+|||||||||+||
T Consensus 78 ~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lA 157 (290)
T PRK13634 78 KKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARSPFELSGGQMRRVAIA 157 (290)
T ss_pred chHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCCcccCCHHHHHHHHHH
Confidence 1111122233 22211 1122233322111 2344455678899999999974556889999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||||++|++|+++ +.|+++++.
T Consensus 158 raL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~-~~g~~~~~~ 234 (290)
T PRK13634 158 GVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVF-LQGTPREIF 234 (290)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EECCHHHHh
Confidence 9999999999999999999999999999988764 679999999999999999999999999997 467776654
No 217
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2e-39 Score=339.60 Aligned_cols=193 Identities=22% Similarity=0.283 Sum_probs=164.1
Q ss_pred EecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcC---------------ceeEEEechhh
Q 007982 375 GYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHN---------------HLRIAQFHQHL 439 (582)
Q Consensus 375 ~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~---------------~~~~~~~~q~~ 439 (582)
.|+ ++.+++|+||+|.+||+++|+|||||||||||++|+|+++|++|+|...+ ...++|++|.+
T Consensus 2 ~~~-~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~ 80 (363)
T TIGR01186 2 KTG-GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQF 80 (363)
T ss_pred ccC-CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCC
Confidence 354 46799999999999999999999999999999999999999999998765 23589999985
Q ss_pred hhhcCCcccHHHHHHhc--C---CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCC
Q 007982 440 AEKLDMDMSALQYMIKE--Y---PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPT 513 (582)
Q Consensus 440 ~~~~~~~~~~~~~~~~~--~---~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt 513 (582)
. +.+..|+.+++... + .. ...+++.++++.+||..... +++.+|||||||||+|||||+.+|++|||||||
T Consensus 81 ~--l~~~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~-~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~ 157 (363)
T TIGR01186 81 A--LFPHMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEH-RYPDELSGGMQQRVGLARALAAEPDILLMDEAF 157 (363)
T ss_pred c--CCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhh-CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 3 55567888876532 1 11 12456889999999986554 456899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 514 NHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 514 ~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++||+.++..+.+.+.++ +.|||+||||++++.++||+|++|++|+++ ..|+++++..
T Consensus 158 saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv-~~g~~~ei~~ 219 (363)
T TIGR01186 158 SALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIV-QVGTPDEILR 219 (363)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEE-eeCCHHHHHh
Confidence 999999999999988654 679999999999999999999999999997 4788887754
No 218
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-39 Score=324.79 Aligned_cols=205 Identities=20% Similarity=0.255 Sum_probs=168.3
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc--------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH-------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~-------- 429 (582)
+.++|+++|++++|++ ..+|+++||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+.+.
T Consensus 18 ~~~~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 18 KEHILEVKDLSIYYGE-KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred CCceEEEEEEEEEeCC-ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 4578999999999964 679999999999999999999999999999999999864 78999976541
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhc--C-CC-C---hHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKE--Y-PG-N---EEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRV 494 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~-~~-~---~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 494 (582)
..++|++|... +. ..++.+++... . .. . ..+.+.+++..+++.. ...+.++.+|||||+|||
T Consensus 97 ~~~~~~~i~~v~q~~~--~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl 173 (268)
T PRK14248 97 VVNLRREIGMVFQKPN--PF-PKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRL 173 (268)
T ss_pred HHHHhccEEEEecCCc--cC-cccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHH
Confidence 24788888753 22 23777766422 1 11 1 1244677888888842 123456789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 495 VFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 495 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||++|||++++..+||+|++|++|+++ +.|+.+++..
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~ 252 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLV-EYDQTEQIFT 252 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 9999999999999999999999999999999999876 469999999999999999999999999996 5788877654
No 219
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-39 Score=323.29 Aligned_cols=205 Identities=22% Similarity=0.270 Sum_probs=168.9
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc--------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH-------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~-------- 429 (582)
+.++|+++|+++.|++ .++|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|...+.
T Consensus 10 ~~~~l~~~~l~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 10 APSKIQVRNLNFYYGK-FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CCceEEEEEEEEEeCC-eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 4678999999999964 579999999999999999999999999999999999986 58999976541
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhc---CCCC----hHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKE---YPGN----EEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRV 494 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 494 (582)
..++|++|... +. ..++.+++... .... ..+++.++++.+++.. ...+.++.+|||||+|||
T Consensus 89 ~~~~~~~i~~~~q~~~--~~-~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv 165 (260)
T PRK10744 89 IALLRAKVGMVFQKPT--PF-PMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRL 165 (260)
T ss_pred hHHHhcceEEEecCCc--cC-cCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHH
Confidence 24788888753 22 25777766421 1111 1345788999999842 122456689999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 495 VFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 495 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ ..|+.+++..
T Consensus 166 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 244 (260)
T PRK10744 166 CIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELI-EFGNTDTIFT 244 (260)
T ss_pred HHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 9999999999999999999999999999999999876 469999999999999999999999999997 4788877653
No 220
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-39 Score=323.91 Aligned_cols=205 Identities=20% Similarity=0.256 Sum_probs=169.3
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc--------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH-------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~-------- 429 (582)
..++|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+.+.
T Consensus 16 ~~~~l~~~nl~~~~~~-~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~ 94 (267)
T PRK14235 16 TEIKMRARDVSVFYGE-KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLD 94 (267)
T ss_pred CCceEEEEeEEEEECC-EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccc
Confidence 4568999999999964 6799999999999999999999999999999999999975 8999987542
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhcC-------CCC-hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKEY-------PGN-EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSR 493 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqr 493 (582)
..++|++|... +.. .++.+++.... ... ..+++.++++.+|+... ....++.+||||||||
T Consensus 95 ~~~~~~~i~~v~q~~~--~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qr 171 (267)
T PRK14235 95 VVELRARVGMVFQKPN--PFP-KSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQR 171 (267)
T ss_pred hHHHhhceEEEecCCC--CCC-CcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHH
Confidence 23788888753 222 36777664211 111 13457889999999531 2235678999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 494 VVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 494 v~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|+|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ ..|+.+++.
T Consensus 172 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 250 (267)
T PRK14235 172 LCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLV-EVGDTEKMF 250 (267)
T ss_pred HHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEE-EeCCHHHHH
Confidence 99999999999999999999999999999999999876 469999999999999999999999999997 578888775
Q ss_pred H
Q 007982 572 L 572 (582)
Q Consensus 572 ~ 572 (582)
.
T Consensus 251 ~ 251 (267)
T PRK14235 251 T 251 (267)
T ss_pred h
Confidence 3
No 221
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2e-40 Score=306.60 Aligned_cols=204 Identities=21% Similarity=0.327 Sum_probs=174.9
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~ 432 (582)
+.|.++|+.++|. ++.++++|||+|++||++||.|||||||||.+.++.|+.+|++|.|..++. .-+
T Consensus 3 ~~L~a~~l~K~y~-kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlGi 81 (243)
T COG1137 3 STLVAENLAKSYK-KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLGI 81 (243)
T ss_pred cEEEehhhhHhhC-CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcCc
Confidence 4689999999996 478999999999999999999999999999999999999999999987642 348
Q ss_pred EEechhhhhhcCCcccHHHHHHhcC---C---CC--hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCC
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEY---P---GN--EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~---~---~~--~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p 504 (582)
+|++|..+ +.-.+|+.++++... . .. ...++.++|+.|+|.+.. +.+..+||||||+|+.|||||+.+|
T Consensus 82 gYLpQE~S--IFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr-~~~a~sLSGGERRR~EIARaLa~~P 158 (243)
T COG1137 82 GYLPQEAS--IFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLR-DSKAYSLSGGERRRVEIARALAANP 158 (243)
T ss_pred ccccccch--HhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHh-cCcccccccchHHHHHHHHHHhcCC
Confidence 99999864 445678888775321 1 11 223467999999998765 4677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHh---cCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNE---WDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~---~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
+++|||||++|+||-+...+.+++.. .+.+|++.-|+..+...+|||.+++.+|+|. ++|+++++.+.
T Consensus 159 ~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vl-a~G~p~ei~~n 229 (243)
T COG1137 159 KFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVL-AEGSPEEIVNN 229 (243)
T ss_pred CEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEE-ecCCHHHHhcC
Confidence 99999999999999988777776654 4679999999999999999999999999996 69999998764
No 222
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=7.4e-39 Score=361.51 Aligned_cols=204 Identities=26% Similarity=0.469 Sum_probs=170.0
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcC
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLD 444 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~ 444 (582)
++|+++|++++|++ +.+|+|+||+|.+|+++||+|||||||||||++|+|+++|++|+|.+.+...+++++|.....
T Consensus 2 ~~l~i~~ls~~~~~-~~il~~is~~i~~Ge~v~LvG~NGsGKSTLLriiaG~~~p~~G~I~~~~~~~~~~l~q~~~~~-- 78 (635)
T PRK11147 2 SLISIHGAWLSFSD-APLLDNAELHIEDNERVCLVGRNGAGKSTLMKILNGEVLLDDGRIIYEQDLIVARLQQDPPRN-- 78 (635)
T ss_pred cEEEEeeEEEEeCC-ceeEeCcEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEeCCCCEEEEeccCCCCC--
Confidence 37999999999964 679999999999999999999999999999999999999999999987655567766542110
Q ss_pred CcccHHHH------------------------------HH------h---cCC-CChHHHHHHHHHhcCCCCccccCCCC
Q 007982 445 MDMSALQY------------------------------MI------K---EYP-GNEEEKMRAAIGRFGLTGKAQVMPMK 484 (582)
Q Consensus 445 ~~~~~~~~------------------------------~~------~---~~~-~~~~~~~~~~l~~~gl~~~~~~~~~~ 484 (582)
...++.++ +. . ... .....++.++++.+|+.. ++++.
T Consensus 79 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgl~~---~~~~~ 155 (635)
T PRK11147 79 VEGTVYDFVAEGIEEQAEYLKRYHDISHLVETDPSEKNLNELAKLQEQLDHHNLWQLENRINEVLAQLGLDP---DAALS 155 (635)
T ss_pred CCCCHHHHHHHhhHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHhCCCCC---CCchh
Confidence 00011110 00 0 000 112456788999999962 46789
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEc
Q 007982 485 NLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWE 564 (582)
Q Consensus 485 ~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~ 564 (582)
+|||||||||+|||+|+.+|+||||||||||||+.++..|.+.|.++++|||+||||++++..+||+|++|++|+++.|.
T Consensus 156 ~LSgGekqRv~LAraL~~~P~lLLLDEPt~~LD~~~~~~L~~~L~~~~~tvlivsHd~~~l~~~~d~i~~L~~G~i~~~~ 235 (635)
T PRK11147 156 SLSGGWLRKAALGRALVSNPDVLLLDEPTNHLDIETIEWLEGFLKTFQGSIIFISHDRSFIRNMATRIVDLDRGKLVSYP 235 (635)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhcCeEEEEECCEEEEec
Confidence 99999999999999999999999999999999999999999999999899999999999999999999999999998889
Q ss_pred CCHHHHHHHH
Q 007982 565 GDIMDFKLHL 574 (582)
Q Consensus 565 g~~~~~~~~~ 574 (582)
|++.+|.+..
T Consensus 236 g~~~~~~~~~ 245 (635)
T PRK11147 236 GNYDQYLLEK 245 (635)
T ss_pred CCHHHHHHHH
Confidence 9999987643
No 223
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-39 Score=318.19 Aligned_cols=200 Identities=27% Similarity=0.394 Sum_probs=161.4
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEEe
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQF 435 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~~ 435 (582)
|+++|+++.|++.+.+++|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..++|+
T Consensus 3 l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 82 (229)
T cd03254 3 IEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGVV 82 (229)
T ss_pred EEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEEe
Confidence 789999999964456999999999999999999999999999999999999999999987642 247888
Q ss_pred chhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCC-----------CCccccCCCCCCChhHHHHHHHHHHHccCC
Q 007982 436 HQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGL-----------TGKAQVMPMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~~LSgGqkqrv~lAral~~~p 504 (582)
+|... + +..++.+++...........+.++++.+++ .... ..++.+|||||||||+|||+|+.+|
T Consensus 83 ~q~~~--~-~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 83 LQDTF--L-FSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVL-GENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred cCCch--h-hhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHh-hcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 88753 2 223777776533222223344444444443 3222 2346899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++|||||||+|||+.++..+.+.|..+ +.|||+||||++++. .||++++|++|++. +.|+.+++..
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~d~i~~l~~g~~~-~~~~~~~~~~ 226 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIK-NADKILVLDDGKII-EEGTHDELLA 226 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHh-hCCEEEEEeCCeEE-EeCCHHHHHh
Confidence 999999999999999999999999876 478999999999996 59999999999997 4788877754
No 224
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-39 Score=305.29 Aligned_cols=205 Identities=24% Similarity=0.376 Sum_probs=175.7
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~ 432 (582)
++|+++|++..|+. ..+|++|||++.+||+++|+|+||+|||||||+|+|+.+|.+|+|.+.+. ..+
T Consensus 2 ~mL~v~~l~~~YG~-~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 2 PMLEVENLSAGYGK-IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred CceeEEeEeecccc-eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 68999999999964 68999999999999999999999999999999999999999999998763 247
Q ss_pred EEechhhhhhcCCcccHHHHHHhc-CCCC---hHH-HHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE-YPGN---EEE-KMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~-~~~~---~~~-~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
+|++|-- .+...+|+.+++.-. +... ... .++++.+.|-.-....+++.++|||||||.++|||||+.+|++|
T Consensus 81 ~~VPegR--~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~PklL 158 (237)
T COG0410 81 AYVPEGR--RIFPRLTVEENLLLGAYARRDKEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPKLL 158 (237)
T ss_pred EeCcccc--cchhhCcHHHHHhhhhhcccccccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCCEE
Confidence 8898874 466789999998643 2211 111 26677788763333445678999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhcC----ceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEWD----GGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~~----~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
||||||.||-|.-...|.+.|+++. .||++|-++..++.+++||.+||++|+|+ ++|+.+++...
T Consensus 159 LLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv-~~G~~~eL~~~ 227 (237)
T COG0410 159 LLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIV-LSGTAAELLAD 227 (237)
T ss_pred EecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEE-EecCHHHHhcC
Confidence 9999999999999999999887753 39999999999999999999999999996 79999999876
No 225
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-39 Score=322.34 Aligned_cols=206 Identities=27% Similarity=0.397 Sum_probs=157.2
Q ss_pred eEEeeeEEEECC-eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---H---HHHH
Q 007982 73 IRIESLSVTFHG-HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---K---LEKE 145 (582)
Q Consensus 73 i~v~nls~~y~~-~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~---~~~~ 145 (582)
|+++||+++|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++... . ....
T Consensus 1 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i----~~~g~~~~~~~~~~~~~~ 76 (241)
T cd03256 1 IEVENLSKTYPNGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSV----LIDGTDINKLKGKALRQL 76 (241)
T ss_pred CEEeeEEEecCCccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceE----EECCEeccccCHhHHHHH
Confidence 478999999987 889999999999999999999999999999999999988775543 2221111 0 1111
Q ss_pred HHHhcc--ccCC---CcchHHHHHHHHH----------cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHH
Q 007982 146 AEILGA--QEDG---GGEQLERVYERLE----------ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 146 ~~~~~~--~~~~---~~~~~~~~~~~l~----------~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~L 210 (582)
...+++ +... .....+++..... .........++.++++.+|+.. ..++++.+|||||||||+|
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~l 155 (241)
T cd03256 77 RRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-KAYQRADQLSGGQQQRVAI 155 (241)
T ss_pred HhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-hhCCCcccCCHHHHHHHHH
Confidence 122222 2111 1222333321110 0111233467888999999964 5688999999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++. .|+++++
T Consensus 156 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~ 232 (241)
T cd03256 156 ARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVF-DGPPAEL 232 (241)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe-ecCHHHh
Confidence 99999999999999999999999999999998764 6799999999999999999999999999974 5666554
No 226
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.2e-39 Score=330.65 Aligned_cols=207 Identities=25% Similarity=0.416 Sum_probs=163.4
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH--HHHHHHHHh
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL--KLEKEAEIL 149 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~ 149 (582)
.|+++|++++|+++.+|+|+||+|++|+++||+||||||||||+++|+|+.+++.|.+. +++... ........+
T Consensus 2 ~l~~~~l~~~~~~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~----i~g~~~~~~~~~~~~~i 77 (301)
T TIGR03522 2 SIRVSSLTKLYGTQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQ----VCGEDVLQNPKEVQRNI 77 (301)
T ss_pred EEEEEEEEEEECCEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEEcccChHHHHhce
Confidence 48999999999999999999999999999999999999999999999999988866432 222111 001111223
Q ss_pred cc--ccCC---CcchHHHHH--HHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 150 GA--QEDG---GGEQLERVY--ERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 150 ~~--~~~~---~~~~~~~~~--~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
++ +... .....+++. ..+...+......++.++++.+|+.+ ..++++..|||||||||+|||||+.+|++||
T Consensus 78 g~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G~~qrv~la~al~~~p~lli 156 (301)
T TIGR03522 78 GYLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRP-EQHKKIGQLSKGYRQRVGLAQALIHDPKVLI 156 (301)
T ss_pred EEecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCch-HhcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 32 2111 112333332 12222344455667899999999975 4689999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 223 LDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||||+|||+.++.++.+.|+++ +.|||++||+++++..+||||++|++|+++ +.|+.+++
T Consensus 157 LDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 219 (301)
T TIGR03522 157 LDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIV-ADKKLDEL 219 (301)
T ss_pred EcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEE-EeCCHHHH
Confidence 99999999999999999999887 579999999999999999999999999997 56777654
No 227
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-39 Score=328.60 Aligned_cols=209 Identities=21% Similarity=0.301 Sum_probs=161.7
Q ss_pred ceEEeeeEEEECC-----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------
Q 007982 72 DIRIESLSVTFHG-----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------ 140 (582)
Q Consensus 72 ~i~v~nls~~y~~-----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------ 140 (582)
.|+++|+++.|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++...
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~----~~g~~~~~~~~~ 77 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTIT----IAGYHITPETGN 77 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE----ECCEECcccccc
Confidence 4889999999974 4699999999999999999999999999999999999998866432 222111
Q ss_pred -HHHHHHHHhc--cccC----CCcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHH
Q 007982 141 -KLEKEAEILG--AQED----GGGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 141 -~~~~~~~~~~--~~~~----~~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LA 211 (582)
........++ ++.. ......+++.... ..........++.++++.+|+.....++++.+|||||||||+||
T Consensus 78 ~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~la 157 (287)
T PRK13641 78 KNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSPFELSGGQMRRVAIA 157 (287)
T ss_pred chHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCcccCCHHHHHHHHHH
Confidence 0111112222 2221 0112233332111 12334455677899999999963456889999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||+.+|++|||||||++||+.++.++.++|+++ +.|||++|||++++..+||++++|++|+++ ..|+.+++.
T Consensus 158 ral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 233 (287)
T PRK13641 158 GVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLI-KHASPKEIF 233 (287)
T ss_pred HHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHh
Confidence 9999999999999999999999999999998865 579999999999999999999999999996 457766554
No 228
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3.4e-39 Score=338.82 Aligned_cols=208 Identities=27% Similarity=0.385 Sum_probs=165.0
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCC--CceeeeeechHHHH-HHHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDM--SSLEAVISCDEERL-KLEKEAEI 148 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~--~~~~~~i~~~~~~~-~~~~~~~~ 148 (582)
.|+++||+++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+.+++. |.+ .+++... ........
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i----~~~g~~~~~~~~~~r~ 80 (362)
T TIGR03258 5 GIRIDHLRVAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRI----AIADRDLTHAPPHKRG 80 (362)
T ss_pred EEEEEEEEEEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEE----EECCEECCCCCHHHCC
Confidence 5899999999999899999999999999999999999999999999999999886 543 2222111 00001112
Q ss_pred hc--cccC---CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 149 LG--AQED---GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 149 ~~--~~~~---~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
++ +|.. +.....+++...+. ..+......++.++++.+||.+ +.++++.+|||||||||+|||||+.+|++|
T Consensus 81 ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~-~~~~~~~~LSgGq~QRvaLARAL~~~P~ll 159 (362)
T TIGR03258 81 LALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGD-AAAHLPAQLSGGMQQRIAIARAIAIEPDVL 159 (362)
T ss_pred EEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCc-hhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 22 2221 12234444433332 2345566778999999999975 578999999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhhc-----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 222 LLDEPTNHLDLEACVWLEETLKKF-----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~~-----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||||++||+..+.++.+.|+++ +.|+|+||||++++..+||+|++|++|+++. .|+++++.
T Consensus 160 LLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~-~g~~~~~~ 227 (362)
T TIGR03258 160 LLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAA-HGEPQALY 227 (362)
T ss_pred EEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 999999999999999999988653 5799999999999999999999999999974 57776654
No 229
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4e-39 Score=322.37 Aligned_cols=207 Identities=24% Similarity=0.364 Sum_probs=158.2
Q ss_pred ceEEeeeEEEEC-CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------HHHH
Q 007982 72 DIRIESLSVTFH-GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------KLEK 144 (582)
Q Consensus 72 ~i~v~nls~~y~-~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~~~~ 144 (582)
+|+++||+++|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ....
T Consensus 1 ~l~~~~l~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~----~~g~~~~~~~~~~~~~ 76 (243)
T TIGR02315 1 MLEVENLSKVYPNGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSIL----LEGTDITKLRGKKLRK 76 (243)
T ss_pred CeEEEeeeeecCCCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEE----ECCEEhhhCCHHHHHH
Confidence 478999999998 78899999999999999999999999999999999999988765432 221111 0111
Q ss_pred HHHHhccccCC-----CcchHHHHHHHHH----------cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHH
Q 007982 145 EAEILGAQEDG-----GGEQLERVYERLE----------ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIA 209 (582)
Q Consensus 145 ~~~~~~~~~~~-----~~~~~~~~~~~l~----------~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~ 209 (582)
....+++.++. .....+++..... .........++.++++.+|+.. ..++++.+|||||||||+
T Consensus 77 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~ 155 (243)
T TIGR02315 77 LRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLAD-KAYQRADQLSGGQQQRVA 155 (243)
T ss_pred HHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHh-hhcCCcccCCHHHHHHHH
Confidence 11223221111 1122222221100 0111233567889999999964 568899999999999999
Q ss_pred HHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 210 LARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 210 LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||||+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|+++ ..|+++++
T Consensus 156 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 233 (243)
T TIGR02315 156 IARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIV-FDGAPSEL 233 (243)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEE-ecCCHHHh
Confidence 999999999999999999999999999999998765 579999999999999999999999999997 45666553
No 230
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-39 Score=322.58 Aligned_cols=213 Identities=25% Similarity=0.370 Sum_probs=164.8
Q ss_pred eEEeeeEEEECC----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-CCCCceeeeeechHHHH-HHHH-H
Q 007982 73 IRIESLSVTFHG----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA-SDMSSLEAVISCDEERL-KLEK-E 145 (582)
Q Consensus 73 i~v~nls~~y~~----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~-~~~~~~~~~i~~~~~~~-~~~~-~ 145 (582)
|+|+||+..|.. ..+++||||+|++||++||||+|||||||+.++|.++.+ +......|.+.+++..+ .+.. .
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 689999999953 479999999999999999999999999999999999988 43333445555544422 1111 1
Q ss_pred H-----HHhc--cccCCC-----cchHHHHHHHHH---cC-ChhHHHHHHHHHHHhCCCChh--hhhccCCCCChhHHHH
Q 007982 146 A-----EILG--AQEDGG-----GEQLERVYERLE---AL-DASTAEKRAAEILYGLGFNKT--MQAKKTRDFSGGWRMR 207 (582)
Q Consensus 146 ~-----~~~~--~~~~~~-----~~~~~~~~~~l~---~~-~~~~~~~~~~~~l~~lgl~~~--~~~~~~~~LSGGqrqR 207 (582)
. ..++ +|++.. ...-..+.+.+. .. ...+..+++.++|+.+||++. ..+.+|++||||||||
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQR 161 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQR 161 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHHH
Confidence 1 1122 233211 111112222222 22 345678899999999999854 6789999999999999
Q ss_pred HHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhH
Q 007982 208 IALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQ 283 (582)
Q Consensus 208 v~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 283 (582)
|.||.||+.+|++||.||||++||...+.+++++|+++ +.++|+||||+..+.++||||+||..|+|+. .|+.++
T Consensus 162 V~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE-~g~~~~ 240 (316)
T COG0444 162 VMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVE-EGPVEE 240 (316)
T ss_pred HHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEE-eCCHHH
Confidence 99999999999999999999999999999999988754 6799999999999999999999999999985 577666
Q ss_pred HHH
Q 007982 284 YVQ 286 (582)
Q Consensus 284 ~~~ 286 (582)
++.
T Consensus 241 i~~ 243 (316)
T COG0444 241 IFK 243 (316)
T ss_pred Hhc
Confidence 553
No 231
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-39 Score=328.77 Aligned_cols=210 Identities=23% Similarity=0.363 Sum_probs=163.1
Q ss_pred ceEEeeeEEEECC-----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHG-----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~-----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-----~ 141 (582)
.|+++||++.|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+.+|+.|.+ .+++... .
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i----~~~g~~~~~~~~~ 77 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKI----IIDGVDITDKKVK 77 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEE----EECCEECCCcCcc
Confidence 3899999999974 469999999999999999999999999999999999998876643 2222111 0
Q ss_pred HHHHHHHhc--cccCC----CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCC-hhhhhccCCCCChhHHHHHHHHH
Q 007982 142 LEKEAEILG--AQEDG----GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFN-KTMQAKKTRDFSGGWRMRIALAR 212 (582)
Q Consensus 142 ~~~~~~~~~--~~~~~----~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~-~~~~~~~~~~LSGGqrqRv~LAr 212 (582)
.......++ ++.+. .....+++..... .+...+...++.++++.+||. ....++++.+|||||||||+|||
T Consensus 78 ~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAr 157 (287)
T PRK13637 78 LSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAG 157 (287)
T ss_pred HHHHhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHH
Confidence 011112232 22211 1233333332211 234555667889999999996 13568899999999999999999
Q ss_pred HHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 213 ALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 213 aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||||++|++|+++. .|+.+++..
T Consensus 158 aL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~-~g~~~~~~~ 234 (287)
T PRK13637 158 VVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCEL-QGTPREVFK 234 (287)
T ss_pred HHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHh
Confidence 999999999999999999999999999998754 6799999999999999999999999999974 577776653
No 232
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=5.3e-39 Score=318.24 Aligned_cols=203 Identities=26% Similarity=0.394 Sum_probs=153.9
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCC-----CCCCCceeeeeechHHHHH-----H
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIE-----ASDMSSLEAVISCDEERLK-----L 142 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~-----~~~~~~~~~~i~~~~~~~~-----~ 142 (582)
|+++||+++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+. +++.|.+ .+++.... .
T Consensus 1 i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i----~~~g~~~~~~~~~~ 76 (227)
T cd03260 1 IELRDLNVYYGDKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEV----LLDGKDIYDLDVDV 76 (227)
T ss_pred CEEEEEEEEcCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEE----EECCEEhhhcchHH
Confidence 57899999999889999999999999999999999999999999999998 6665543 22221110 1
Q ss_pred HHHHHHhccccCCC----cchHHHHHHHHH--cCCh-hHHHHHHHHHHHhCCCChhhhhcc--CCCCChhHHHHHHHHHH
Q 007982 143 EKEAEILGAQEDGG----GEQLERVYERLE--ALDA-STAEKRAAEILYGLGFNKTMQAKK--TRDFSGGWRMRIALARA 213 (582)
Q Consensus 143 ~~~~~~~~~~~~~~----~~~~~~~~~~l~--~~~~-~~~~~~~~~~l~~lgl~~~~~~~~--~~~LSGGqrqRv~LAra 213 (582)
......+++.++.. ....+++..... .... ...+.++.++++.+|+.+. .+++ +.+|||||||||+||||
T Consensus 77 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~LSgG~~qrv~la~a 155 (227)
T cd03260 77 LELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDE-VKDRLHALGLSGGQQQRLCLARA 155 (227)
T ss_pred HHHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChH-HhccCCcccCCHHHHHHHHHHHH
Confidence 11122232211111 122233221111 1111 2245678899999999753 4455 59999999999999999
Q ss_pred HhcCCCceeecCCCCCCCHHHHHHHHHHHhhcC--cEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCCh
Q 007982 214 LFINPTILLLDEPTNHLDLEACVWLEETLKKFD--RILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNF 281 (582)
Q Consensus 214 L~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 281 (582)
|+.+|++|||||||++||+.++.++.++|+++. .|||++|||++++..+||++++|++|+++.+ |+.
T Consensus 156 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~-g~~ 224 (227)
T cd03260 156 LANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEF-GPT 224 (227)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEe-cCc
Confidence 999999999999999999999999999998763 5999999999999999999999999999743 443
No 233
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-39 Score=321.25 Aligned_cols=207 Identities=23% Similarity=0.363 Sum_probs=174.0
Q ss_pred eEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-C----CCcEEEEcCc--------
Q 007982 366 VLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-P----LDGMVRRHNH-------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-p----~~G~i~~~~~-------- 429 (582)
+|+++||+..|... ..+++||||+|.+||++||||.|||||||+.+.|.|+++ | .+|+|.+.+.
T Consensus 1 lL~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~ 80 (316)
T COG0444 1 LLEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEK 80 (316)
T ss_pred CceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHH
Confidence 47899999999642 369999999999999999999999999999999999997 4 5688877653
Q ss_pred -------eeEEEechhhhhhcCCcccHHHHHHh----cCCC--C--hHHHHHHHHHhcCCCCc--cccCCCCCCChhHHH
Q 007982 430 -------LRIAQFHQHLAEKLDMDMSALQYMIK----EYPG--N--EEEKMRAAIGRFGLTGK--AQVMPMKNLSDGQRS 492 (582)
Q Consensus 430 -------~~~~~~~q~~~~~~~~~~~~~~~~~~----~~~~--~--~~~~~~~~l~~~gl~~~--~~~~~~~~LSgGqkq 492 (582)
..+++++|++...+++-.++-..+.. .... . ..+++.++|+.+||.+. ..+..+.+|||||+|
T Consensus 81 ~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YPhelSGGMrQ 160 (316)
T COG0444 81 ELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYPHELSGGMRQ 160 (316)
T ss_pred HHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCCcccCCcHHH
Confidence 25899999988888877766544432 1111 1 24578899999999864 233445899999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHH
Q 007982 493 RVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIM 568 (582)
Q Consensus 493 rv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~ 568 (582)
||+||.||+.+|+|||.||||.+||...+..+.++|+++ +.++|+||||+..+.++||||+||..|+|++ .|+.+
T Consensus 161 RV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE-~g~~~ 239 (316)
T COG0444 161 RVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVE-EGPVE 239 (316)
T ss_pred HHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEE-eCCHH
Confidence 999999999999999999999999999999998888764 6799999999999999999999999999987 78888
Q ss_pred HHHHH
Q 007982 569 DFKLH 573 (582)
Q Consensus 569 ~~~~~ 573 (582)
++++.
T Consensus 240 ~i~~~ 244 (316)
T COG0444 240 EIFKN 244 (316)
T ss_pred HHhcC
Confidence 87653
No 234
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=8.3e-39 Score=352.91 Aligned_cols=204 Identities=27% Similarity=0.370 Sum_probs=175.6
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------ee
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LR 431 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~ 431 (582)
.++|+++|++++|++ +.+|+|+||+|.+|++++|+|||||||||||++|+|+++|++|+|.+.+. ..
T Consensus 9 ~~~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 9 PPLLCARSISKQYSG-VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred CceEEEEeEEEEeCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 468999999999964 67999999999999999999999999999999999999999999987652 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcCC--CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEYP--GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLL 509 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 509 (582)
++|++|... +....++.+++..... ....+++.++++.+|+.... ++++.+|||||||||+|||||+.+|++|||
T Consensus 88 i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~aL~~~p~lllL 164 (510)
T PRK15439 88 IYLVPQEPL--LFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLDL-DSSAGSLEVADRQIVEILRGLMRDSRILIL 164 (510)
T ss_pred EEEEeccCc--cCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCccc-cCChhhCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 789998753 4455788887654321 11245688899999998654 456789999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 510 DEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 510 DEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++++..
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 229 (510)
T PRK15439 165 DEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIA-LSGKTADLST 229 (510)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecChHHcCH
Confidence 9999999999999999998765 579999999999999999999999999997 5888887753
No 235
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-39 Score=324.11 Aligned_cols=201 Identities=20% Similarity=0.323 Sum_probs=155.6
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhc
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILG 150 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 150 (582)
..|+++||+++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++.... .....++
T Consensus 11 ~~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i----~~~g~~~~--~~~~~i~ 84 (257)
T PRK11247 11 TPLLLNAVSKRYGERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGEL----LAGTAPLA--EAREDTR 84 (257)
T ss_pred CcEEEEEEEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEE----EECCEEHH--HhhCceE
Confidence 36999999999998899999999999999999999999999999999999998876543 22221111 1111122
Q ss_pred c--ccCCCcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCCCC
Q 007982 151 A--QEDGGGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTN 228 (582)
Q Consensus 151 ~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~ 228 (582)
+ +..... ....+.+.+..........++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 85 ~v~q~~~l~-~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgGqkqrl~laraL~~~p~lllLDEPt~ 162 (257)
T PRK11247 85 LMFQDARLL-PWKKVIDNVGLGLKGQWRDAALQALAAVGLAD-RANEWPAALSGGQKQRVALARALIHRPGLLLLDEPLG 162 (257)
T ss_pred EEecCccCC-CCCcHHHHHHhcccchHHHHHHHHHHHcCChh-HhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Confidence 1 221111 11122222221001123457889999999975 4688999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCC
Q 007982 229 HLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGN 280 (582)
Q Consensus 229 ~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~ 280 (582)
+||+.++..+.++|+++ +.|||+||||++++..+||+|++|++|+++. .++
T Consensus 163 ~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~-~~~ 217 (257)
T PRK11247 163 ALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGL-DLT 217 (257)
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe-ecc
Confidence 99999999999988654 6799999999999999999999999999964 344
No 236
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1e-38 Score=318.30 Aligned_cols=201 Identities=26% Similarity=0.399 Sum_probs=161.6
Q ss_pred EEEEEEEEEecC-CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 367 LQFVEVTFGYTP-DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 367 l~~~~l~~~y~~-~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
|+++|+++.|++ +.++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 478999999963 356999999999999999999999999999999999999999999987652 24889
Q ss_pred echhhhhhcCCcccHHHHHHhcCCCChHHHHH---------HHHHhc--CCCCccccCCCCCCChhHHHHHHHHHHHccC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEYPGNEEEKMR---------AAIGRF--GLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~l~~~--gl~~~~~~~~~~~LSgGqkqrv~lAral~~~ 503 (582)
++|... + +..++.+++...........+. +++..+ ++.... ..++.+|||||||||+|||||+.+
T Consensus 81 ~~q~~~--~-~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~-~~~~~~LSgG~~qrv~laral~~~ 156 (237)
T cd03252 81 VLQENV--L-FNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIV-GEQGAGLSGGQRQRIAIARALIHN 156 (237)
T ss_pred EcCCch--h-ccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchh-hcCCCcCCHHHHHHHHHHHHHhhC
Confidence 998853 2 2457777764322111122222 233333 443333 346689999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
|++|||||||++||+.++..+.+.|.++ +.|||++|||++++. .||++++|++|+++ +.|+++++...
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~-~~~~~~~~~~~ 226 (237)
T cd03252 157 PRILIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVK-NADRIIVMEKGRIV-EQGSHDELLAE 226 (237)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHH-hCCEEEEEECCEEE-EEcCHHHHHhc
Confidence 9999999999999999999999999876 469999999999995 69999999999997 57888877553
No 237
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.3e-39 Score=318.81 Aligned_cols=196 Identities=28% Similarity=0.448 Sum_probs=151.0
Q ss_pred eEEeeeEEEECC----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH------H
Q 007982 73 IRIESLSVTFHG----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK------L 142 (582)
Q Consensus 73 i~v~nls~~y~~----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~------~ 142 (582)
|+++||+++|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++.... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i----~~~g~~~~~~~~~~~ 76 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEV----RVDGTDISKLSEKEL 76 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeE----EECCEehhhcchhHH
Confidence 578999999986 789999999999999999999999999999999999998876543 22221110 0
Q ss_pred HH-HHHHhcc--ccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHH
Q 007982 143 EK-EAEILGA--QEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARAL 214 (582)
Q Consensus 143 ~~-~~~~~~~--~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 214 (582)
.. ....+++ +... .....+++.... ........+.++.++++.+|+.. ..++++.+|||||||||+|||||
T Consensus 77 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~la~al 155 (218)
T cd03255 77 AAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGD-RLNHYPSELSGGQQQRVAIARAL 155 (218)
T ss_pred HHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCch-hhhcChhhcCHHHHHHHHHHHHH
Confidence 00 1112222 1111 112333332211 12222334567889999999975 45889999999999999999999
Q ss_pred hcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeE
Q 007982 215 FINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQL 274 (582)
Q Consensus 215 ~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i 274 (582)
+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++. +||++++|++|++
T Consensus 156 ~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~v~~l~~G~i 218 (218)
T cd03255 156 ANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAE-YADRIIELRDGKI 218 (218)
T ss_pred ccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHh-hhcEEEEeeCCcC
Confidence 9999999999999999999999999998765 579999999999997 9999999999974
No 238
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-39 Score=313.03 Aligned_cols=198 Identities=22% Similarity=0.424 Sum_probs=155.8
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhcc-
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILGA- 151 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~- 151 (582)
|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|. +.+++..... .....+++
T Consensus 1 l~~~~l~~~~~~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~----i~~~g~~~~~-~~~~~i~~~ 75 (210)
T cd03269 1 LEVENVTKRFGRVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGE----VLFDGKPLDI-AARNRIGYL 75 (210)
T ss_pred CEEEEEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceE----EEECCCchhH-HHHccEEEe
Confidence 57899999999889999999999999999999999999999999999998887554 3333322211 11112221
Q ss_pred -ccCC---CcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecC
Q 007982 152 -QEDG---GGEQLERVYER--LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDE 225 (582)
Q Consensus 152 -~~~~---~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDE 225 (582)
+... .....+++... ..........+.+.++++.+|+.. ..++++.+|||||||||+|||||+.+|++|||||
T Consensus 76 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrl~la~al~~~p~~lllDE 154 (210)
T cd03269 76 PEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSE-YANKRVEELSKGNQQKVQFIAAVIHDPELLILDE 154 (210)
T ss_pred ccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChH-HHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 1111 11233333211 112233445667889999999974 5678899999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 226 PTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 226 Pt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
||++||+.++.++.++|+++ +.|||++|||++++..+||++++|++|+++.
T Consensus 155 P~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 155 PFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 99999999999999999765 5799999999999999999999999999864
No 239
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.5e-39 Score=316.61 Aligned_cols=201 Identities=23% Similarity=0.334 Sum_probs=152.7
Q ss_pred ceEEeeeEEEE-CCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechHH-HHHHHHHHHH
Q 007982 72 DIRIESLSVTF-HGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDEE-RLKLEKEAEI 148 (582)
Q Consensus 72 ~i~v~nls~~y-~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~~-~~~~~~~~~~ 148 (582)
+|+++|++++| +++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+... ..+... ..........
T Consensus 1 ~l~~~~l~~~~~~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 1 MIEFHNVSKAYPGGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred CEEEEeeeEEeCCCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 47899999999 46789999999999999999999999999999999999988876543210 011000 0001111122
Q ss_pred hcc--ccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 149 LGA--QEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
+++ +... .....+++.... ........+.++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++|
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrl~la~al~~~p~ll 159 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEH-KADAFPEQLSGGEQQRVAIARAIVNSPPLL 159 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCHHHHHHHHHHHHHhCCCCEE
Confidence 222 1111 112233332211 12233444567889999999974 567899999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCe
Q 007982 222 LLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQ 273 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~ 273 (582)
||||||++||+.++.++.++|+++ +.|+|+||||++++..+||++++|++|+
T Consensus 160 lLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 160 LADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999765 6799999999999999999999999884
No 240
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-39 Score=321.24 Aligned_cols=207 Identities=26% Similarity=0.367 Sum_probs=158.6
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILG 150 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 150 (582)
.|+++||++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++.... .......++
T Consensus 2 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i----~~~g~~~~~~~~~~~~i~ 77 (239)
T cd03296 2 SIEVRNVSKRFGDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTI----LFGGEDATDVPVQERNVG 77 (239)
T ss_pred EEEEEeEEEEECCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE----EECCEECCcCCccccceE
Confidence 4899999999999899999999999999999999999999999999999988875543 22211100 000011122
Q ss_pred c--ccCC---CcchHHHHHHHHH--cC----ChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCC
Q 007982 151 A--QEDG---GGEQLERVYERLE--AL----DASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPT 219 (582)
Q Consensus 151 ~--~~~~---~~~~~~~~~~~l~--~~----~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~ 219 (582)
+ +.+. .....+++..... .. .......++.++++.+|+.. ..++++.+|||||||||+|||||+.+|+
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrl~la~al~~~p~ 156 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDW-LADRYPAQLSGGQRQRVALARALAVEPK 156 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChh-hhhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 1 2111 1223333322111 11 22334456889999999964 5688999999999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 220 ILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 220 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
+|||||||++||+.++..+.++|.++ +.|||+||||++++..+||++++|++|+++. .|+.+++
T Consensus 157 llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 224 (239)
T cd03296 157 VLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQ-VGTPDEV 224 (239)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEE-ecCHHHH
Confidence 99999999999999999999998764 5799999999999999999999999999964 5666554
No 241
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=5.7e-39 Score=325.99 Aligned_cols=213 Identities=21% Similarity=0.247 Sum_probs=161.9
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechHH-HHHHHHHHHH
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDEE-RLKLEKEAEI 148 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~~-~~~~~~~~~~ 148 (582)
.+|+++||+++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+... ..+... ..........
T Consensus 6 ~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~ 85 (269)
T PRK11831 6 NLVDMRGVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKR 85 (269)
T ss_pred ceEEEeCeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhhc
Confidence 37999999999999999999999999999999999999999999999999998876543211 011000 0001111122
Q ss_pred hcc--ccCC---CcchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCc
Q 007982 149 LGA--QEDG---GGEQLERVYERLE---ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTI 220 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~l 220 (582)
+++ +... .....+++...+. ..+....+.++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++
T Consensus 86 i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgGq~qrv~laral~~~p~l 164 (269)
T PRK11831 86 MSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRG-AAKLMPSELSGGMARRAALARAIALEPDL 164 (269)
T ss_pred EEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 221 2211 1133333322221 1233334567888999999974 56889999999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 221 LLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 221 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|+++ +.|+.+++.
T Consensus 165 llLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 232 (269)
T PRK11831 165 IMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIV-AHGSAQALQ 232 (269)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEE-EeCCHHHHh
Confidence 9999999999999999999998765 579999999999999999999999999997 456666554
No 242
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=5.6e-39 Score=338.34 Aligned_cols=209 Identities=26% Similarity=0.396 Sum_probs=165.4
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHh
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEIL 149 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~ 149 (582)
.+|+++|++++|+++.+|+++||+|++|++++|+|||||||||||++|+|+.+++.|.+ .+++.... .......+
T Consensus 13 ~~L~l~~l~~~~~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I----~~~g~~i~~~~~~~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRI----MLDGQDITHVPAENRHV 88 (375)
T ss_pred ceEEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEE----EECCEECCCCCHHHCCE
Confidence 36999999999999999999999999999999999999999999999999999876543 22221110 00011122
Q ss_pred c--cccC---CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 150 G--AQED---GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 150 ~--~~~~---~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
+ +|.. +.....+++...+. ..+......++.++++.+||.+ +.++++.+|||||||||+|||||+.+|++||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~p~~LSgGq~QRVaLARaL~~~P~llL 167 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEE-FAQRKPHQLSGGQQQRVAIARAVVNKPKVLL 167 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCch-hhhCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 2 2222 12244455543332 2344455678899999999974 6789999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 223 LDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||||++||+..+..+.+.|+++ +.|+|+||||++++..+||+|++|++|+++. .|+++++.
T Consensus 168 LDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~-~g~~~~i~ 233 (375)
T PRK09452 168 LDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQ-DGTPREIY 233 (375)
T ss_pred EeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 99999999999999999988654 6899999999999999999999999999974 46666554
No 243
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=333.98 Aligned_cols=208 Identities=26% Similarity=0.413 Sum_probs=161.8
Q ss_pred ceEEeeeEEEEC----CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------H
Q 007982 72 DIRIESLSVTFH----GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------K 141 (582)
Q Consensus 72 ~i~v~nls~~y~----~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~ 141 (582)
||+++||+++|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++... .
T Consensus 1 mi~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~----~~g~~i~~~~~~~ 76 (343)
T PRK11153 1 MIELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVL----VDGQDLTALSEKE 76 (343)
T ss_pred CEEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEE----ECCEECCcCCHHH
Confidence 488999999997 46899999999999999999999999999999999999988766432 221110 1
Q ss_pred HHHHHHHhcc--ccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARAL 214 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 214 (582)
.......+++ +... .....+++.... ..........++.++++.+|+.+ ..++++.+|||||||||+|||||
T Consensus 77 ~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~LSgGq~qRv~lAraL 155 (343)
T PRK11153 77 LRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSD-KADRYPAQLSGGQKQRVAIARAL 155 (343)
T ss_pred HHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-hhhCChhhCCHHHHHHHHHHHHH
Confidence 1111122332 2211 123334432222 22334455677899999999974 56889999999999999999999
Q ss_pred hcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 215 FINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 215 ~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 156 ~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~-~g~~~~~~ 229 (343)
T PRK11153 156 ASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVE-QGTVSEVF 229 (343)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 9999999999999999999999999998765 5799999999999999999999999999974 56655543
No 244
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1e-38 Score=313.07 Aligned_cols=193 Identities=27% Similarity=0.393 Sum_probs=162.4
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEech
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFHQ 437 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~q 437 (582)
++++|+++.|+. .+.|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|
T Consensus 1 ~~~~~l~~~~~~---~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~i~~v~q 77 (213)
T TIGR01277 1 LALDKVRYEYEH---LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLAPYQRPVSMLFQ 77 (213)
T ss_pred CeEEeeeEEeCC---cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCChhccceEEEec
Confidence 468999999962 468999999999999999999999999999999999999999987653 24788888
Q ss_pred hhhhhcCCcccHHHHHHhcC-C-----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 438 HLAEKLDMDMSALQYMIKEY-P-----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
... +....++.+++.... . ....+++.++++.+|+.... ++++.+|||||+|||+||||++.+|++|||||
T Consensus 78 ~~~--~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllDE 154 (213)
T TIGR01277 78 ENN--LFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYL-DRLPEQLSGGQRQRVALARCLVRPNPILLLDE 154 (213)
T ss_pred cCc--cCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHh-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 753 444567777764211 1 11345678899999997654 45668999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCC
Q 007982 512 PTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGD 566 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~ 566 (582)
||++||+.++..+.+.|.++ +.|||+||||.+++..+||++++|++|++.. .|+
T Consensus 155 Pt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~-~~~ 212 (213)
T TIGR01277 155 PFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKV-VSD 212 (213)
T ss_pred CCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE-ecC
Confidence 99999999999999988764 5699999999999999999999999999974 443
No 245
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.2e-39 Score=316.20 Aligned_cols=195 Identities=29% Similarity=0.426 Sum_probs=150.5
Q ss_pred EEeeeEEEECC--eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHHH
Q 007982 74 RIESLSVTFHG--HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAEI 148 (582)
Q Consensus 74 ~v~nls~~y~~--~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 148 (582)
+++|++++|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ........
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~----~~g~~~~~~~~~~~~~~ 76 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVL----VDGKDLTKLSLKELRRK 76 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEE----ECCEEcccCCHHHHHhh
Confidence 36899999987 7899999999999999999999999999999999999988766432 211110 01111122
Q ss_pred hcc--ccC----CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCc
Q 007982 149 LGA--QED----GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTI 220 (582)
Q Consensus 149 ~~~--~~~----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~l 220 (582)
+++ +.. ......+++..... .........++.++++.+|+.. ..++++.+|||||||||+|||||+.+|++
T Consensus 77 i~~~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~laral~~~p~l 155 (211)
T cd03225 77 VGLVFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEG-LRDRSPFTLSGGQKQRVAIAGVLAMDPDI 155 (211)
T ss_pred ceEEecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHh-hhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 222 211 11122333322111 1233344567889999999974 56889999999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCe
Q 007982 221 LLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQ 273 (582)
Q Consensus 221 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~ 273 (582)
|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|+
T Consensus 156 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 156 LLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999765 5699999999999999999999999884
No 246
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=322.74 Aligned_cols=205 Identities=21% Similarity=0.225 Sum_probs=168.0
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc--------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH-------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~-------- 429 (582)
++++|+++|++++|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+.+.
T Consensus 10 ~~~~l~i~nl~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 10 KNIIISLQNVTISYGT-FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred CCceEEEEeEEEEECC-EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 3568999999999964 679999999999999999999999999999999999987 68999987542
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhcC-----CCChHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKEY-----PGNEEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|... +.. .++.+++.... .....+.+.++++.+++.. ...+.++.+|||||||||+|
T Consensus 89 ~~~~~~~i~~v~q~~~--l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~l 165 (269)
T PRK14259 89 PVEVRRRIGMVFQQPN--PFP-KSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCI 165 (269)
T ss_pred HHHHhhceEEEccCCc--cch-hhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHH
Confidence 14788888753 222 47777764211 1112345677888888742 12345678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeC-----------CeEEEE
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCEN-----------QAVTRW 563 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~-----------G~i~~~ 563 (582)
||||+.+|++|||||||+|||+.++..+.++|+++ +.|||+||||++++..+||++++|++ |+++ .
T Consensus 166 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~-~ 244 (269)
T PRK14259 166 ARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLV-E 244 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEE-E
Confidence 99999999999999999999999999999999876 46899999999999999999999996 5565 4
Q ss_pred cCCHHHHHH
Q 007982 564 EGDIMDFKL 572 (582)
Q Consensus 564 ~g~~~~~~~ 572 (582)
+|++.++.+
T Consensus 245 ~~~~~~~~~ 253 (269)
T PRK14259 245 FNETKKIFN 253 (269)
T ss_pred eCCHHHHHh
Confidence 788888754
No 247
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.5e-39 Score=291.11 Aligned_cols=192 Identities=28% Similarity=0.372 Sum_probs=164.9
Q ss_pred eEEEEEEEEEecC---CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------
Q 007982 366 VLQFVEVTFGYTP---DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~---~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------- 429 (582)
+|+++++++..+. ...+|++|+|.|.+||.+|||||+||||||||-+++|+..|++|+|+..++
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 7889999887753 246999999999999999999999999999999999999999999987553
Q ss_pred --eeEEEechhhhhhcCCcccHHHHHHhcC------CCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc
Q 007982 430 --LRIAQFHQHLAEKLDMDMSALQYMIKEY------PGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 430 --~~~~~~~q~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
.++|+++|.|. +-++++.++++.-.. .......++.+|+++||.....+.| .+|||||||||+||||++
T Consensus 86 R~~~vGfVFQSF~--Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~Rl~HyP-~qLSGGEQQRVAiARAfa 162 (228)
T COG4181 86 RARHVGFVFQSFH--LIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGKRLTHYP-AQLSGGEQQRVALARAFA 162 (228)
T ss_pred hccceeEEEEeee--ccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCcccccccCc-cccCchHHHHHHHHHHhc
Confidence 36899999875 556778888764211 1223456899999999998877666 799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhcCEEEEEeCCeEE
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNE----WDGGLVLVSHDFRLINQVAHEIWVCENQAVT 561 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 561 (582)
..|+||+.||||.+||.++-+.+.+++-. .+.|+|+||||..++. -|+|++.|.+|++.
T Consensus 163 ~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~-Rc~R~~r~~~G~l~ 225 (228)
T COG4181 163 GRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAA-RCDRQLRLRSGRLV 225 (228)
T ss_pred CCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHH-hhhheeeeecceec
Confidence 99999999999999999999988888744 4679999999999985 59999999999985
No 248
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.2e-39 Score=336.82 Aligned_cols=208 Identities=25% Similarity=0.376 Sum_probs=163.5
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILG 150 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 150 (582)
+|+++|++++|+++.+|+|+||+|++||+++|+|||||||||||++|+|+.+++.|.+. +++.... .......++
T Consensus 2 ~L~i~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~----i~g~~i~~~~~~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIR----FHGTDVSRLHARDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCCeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE----ECCEECCCCCHHHCCEE
Confidence 48999999999998999999999999999999999999999999999999988766432 2221110 000111222
Q ss_pred --cccC---CCcchHHHHHHHHH------cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCC
Q 007982 151 --AQED---GGGEQLERVYERLE------ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPT 219 (582)
Q Consensus 151 --~~~~---~~~~~~~~~~~~l~------~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~ 219 (582)
+|.. +.....+++...+. ..+.....+++.++++.++|.+ ..++++.+|||||||||+|||||+.+|+
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~LSgGq~QRvalArAL~~~P~ 156 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAH-LADRYPAQLSGGQKQRVALARALAVEPQ 156 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCch-hhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 2221 11233444433222 1234455678999999999974 5789999999999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 220 ILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 220 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+|||||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|+++. .|+++++.
T Consensus 157 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~-~g~~~~i~ 225 (353)
T PRK10851 157 ILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQ-AGTPDQVW 225 (353)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 99999999999999999999888654 6799999999999999999999999999974 57766654
No 249
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=9.4e-39 Score=314.90 Aligned_cols=192 Identities=28% Similarity=0.403 Sum_probs=159.8
Q ss_pred EEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 367 LQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 367 l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
|+++|+++.|++. +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (220)
T cd03245 3 IEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGY 82 (220)
T ss_pred EEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEEE
Confidence 6899999999642 56999999999999999999999999999999999999999999987652 24788
Q ss_pred echhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccC----------CCCCCChhHHHHHHHHHHHccCC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVM----------PMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~----------~~~~LSgGqkqrv~lAral~~~p 504 (582)
++|... +. ..++.+++...........+.++++.+++.+..... ++.+|||||||||+||||++.+|
T Consensus 83 ~~q~~~--~~-~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 83 VPQDVT--LF-YGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred eCCCCc--cc-cchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 888753 22 247777764322222344567788888886543322 24699999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEWD--GGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
++|||||||+|||+.++..+.+.|+++. .|||+||||++++ ++||++++|++|+++.
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~d~v~~l~~g~i~~ 218 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLVDRIIVMDSGRIVA 218 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhCCEEEEEeCCeEee
Confidence 9999999999999999999999998863 6999999999987 6999999999999863
No 250
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-39 Score=339.21 Aligned_cols=208 Identities=22% Similarity=0.354 Sum_probs=163.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILG 150 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 150 (582)
.|+++|++++|+++.+|+|+||+|++|++++|+|||||||||||++|+|+.+|+.|.+. +++.... .......++
T Consensus 3 ~l~i~~l~~~~~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~----~~g~~i~~~~~~~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLF----IGEKRMNDVPPAERGVG 78 (369)
T ss_pred EEEEEEEEEEeCCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEE----ECCEECCCCCHhHCCEE
Confidence 58999999999998999999999999999999999999999999999999988766432 2211110 000011222
Q ss_pred --cccCC---CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceee
Q 007982 151 --AQEDG---GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLL 223 (582)
Q Consensus 151 --~~~~~---~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlL 223 (582)
+|... .....+++...+. .........++.++++.+||.+ ..++++.+|||||||||+|||||+.+|++|||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLL 157 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAH-LLDRKPKALSGGQRQRVAIGRTLVAEPSVFLL 157 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChh-hhcCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 22211 1234444433222 2334455678999999999974 57899999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 224 DEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 224 DEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||++||+.++..+.+.|+++ +.|+|+||||++++..+||+|++|++|+++. .|+++++.
T Consensus 158 DEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~-~g~~~~i~ 222 (369)
T PRK11000 158 DEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQ-VGKPLELY 222 (369)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-EcCHHHHH
Confidence 9999999999999998888654 6799999999999999999999999999974 46666543
No 251
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=325.41 Aligned_cols=210 Identities=23% Similarity=0.390 Sum_probs=162.2
Q ss_pred ceEEeeeEEEECC-----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------
Q 007982 72 DIRIESLSVTFHG-----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------ 140 (582)
Q Consensus 72 ~i~v~nls~~y~~-----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------ 140 (582)
.|+++||+++|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++...
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~----~~g~~i~~~~~~ 77 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVT----VDDITITHKTKD 77 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE----ECCEECcccccc
Confidence 3899999999964 3699999999999999999999999999999999999988766432 222111
Q ss_pred -HHHHHHHHhc--cccCC-C---cchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHH
Q 007982 141 -KLEKEAEILG--AQEDG-G---GEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 141 -~~~~~~~~~~--~~~~~-~---~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LA 211 (582)
........++ ++.+. . ....+++..... .++......++.++++.+|+.....++++.+|||||||||+||
T Consensus 78 ~~~~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~la 157 (286)
T PRK13646 78 KYIRPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAIV 157 (286)
T ss_pred chHHHHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHH
Confidence 1111122233 22211 1 122223322111 2344556678899999999963456789999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
|||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++++..
T Consensus 158 raL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 235 (286)
T PRK13646 158 SILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIV-SQTSPKELFK 235 (286)
T ss_pred HHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EECCHHHHHh
Confidence 9999999999999999999999999999998764 579999999999999999999999999997 4577766543
No 252
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=320.71 Aligned_cols=204 Identities=21% Similarity=0.256 Sum_probs=167.6
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc----------
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH---------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~---------- 429 (582)
++|+++|++++|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+.+.
T Consensus 3 ~~l~i~~v~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 3 KRIDVKDLNIYYGS-FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred ccEEEeeEEEEECC-EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 36899999999964 5799999999999999999999999999999999999974 6999987542
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc---CC---CC-hHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE---YP---GN-EEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~---~~-~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|... +....++.+++... .. .. ..+.+.++++.+|+.. .....++.+|||||+|||+|
T Consensus 82 ~~~~~i~~~~q~~~--~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 159 (258)
T PRK14241 82 AVRRTIGMVFQRPN--PFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCI 159 (258)
T ss_pred HHhcceEEEccccc--cCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 13778888643 33446777766421 11 11 2345677899999842 22345678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEe------CCeEEEEcCCHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCE------NQAVTRWEGDIM 568 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~------~G~i~~~~g~~~ 568 (582)
||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++.++||+|++|+ +|+++ +.|+++
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~-~~~~~~ 238 (258)
T PRK14241 160 ARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLV-EIDDTE 238 (258)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEE-ecCCHH
Confidence 99999999999999999999999999999999876 4699999999999999999999997 79996 578888
Q ss_pred HHHH
Q 007982 569 DFKL 572 (582)
Q Consensus 569 ~~~~ 572 (582)
++..
T Consensus 239 ~~~~ 242 (258)
T PRK14241 239 KIFS 242 (258)
T ss_pred HHHh
Confidence 7753
No 253
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-39 Score=325.81 Aligned_cols=206 Identities=24% Similarity=0.331 Sum_probs=160.5
Q ss_pred ceEEeeeEEEEC-CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHH
Q 007982 72 DIRIESLSVTFH-GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAE 147 (582)
Q Consensus 72 ~i~v~nls~~y~-~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~ 147 (582)
+|+++|+++.|+ +..+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+ .+++... .......
T Consensus 4 ~l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i----~~~g~~~~~~~~~~~~~ 79 (274)
T PRK13647 4 IIEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRV----KVMGREVNAENEKWVRS 79 (274)
T ss_pred eEEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEE----EECCEECCCCCHHHHHh
Confidence 699999999996 5689999999999999999999999999999999999998876543 2222111 0111112
Q ss_pred Hhcc--ccC----CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCC
Q 007982 148 ILGA--QED----GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPT 219 (582)
Q Consensus 148 ~~~~--~~~----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~ 219 (582)
.+++ +.+ ......+++..... ..+....+.++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|+
T Consensus 80 ~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~LSgG~~qrv~laraL~~~p~ 158 (274)
T PRK13647 80 KVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWD-FRDKPPYHLSYGQKKRVAIAGVLAMDPD 158 (274)
T ss_pred hEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHH-HhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 2332 221 11123333322111 2333445667899999999964 5788999999999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhH
Q 007982 220 ILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQ 283 (582)
Q Consensus 220 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 283 (582)
+|||||||++||+.++.++.++|+++ +.|||++|||++++..+||+|++|++|+++. .|+.+.
T Consensus 159 llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~ 224 (274)
T PRK13647 159 VIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLA-EGDKSL 224 (274)
T ss_pred EEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHH
Confidence 99999999999999999999999765 5799999999999999999999999999974 566553
No 254
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-38 Score=316.82 Aligned_cols=201 Identities=23% Similarity=0.329 Sum_probs=168.5
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEech
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFHQ 437 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~q 437 (582)
|.++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|
T Consensus 1 l~~~~l~~~~~~-~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q 79 (232)
T cd03300 1 IELENVSKFYGG-FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPPHKRPVNTVFQ 79 (232)
T ss_pred CEEEeEEEEeCC-eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcceEEEec
Confidence 468999999964 67999999999999999999999999999999999999999999987542 24788888
Q ss_pred hhhhhcCCcccHHHHHHhcC--C----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 438 HLAEKLDMDMSALQYMIKEY--P----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
... +....++.+++.... . ....+.+..+++.+|+..... ..+..||+||+|||+|||||+.+|++|||||
T Consensus 80 ~~~--~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~lS~G~~qrl~laral~~~p~llllDE 156 (232)
T cd03300 80 NYA--LFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYAN-RKPSQLSGGQQQRVAIARALVNEPKVLLLDE 156 (232)
T ss_pred ccc--cCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhc-CChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 743 223456766654211 1 112346778899999986554 4558999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 512 PTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||+|||+.++..+.+.|+++ +.|||++|||++++..+||++++|++|++.. .|+..++..
T Consensus 157 P~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~-~~~~~~~~~ 220 (232)
T cd03300 157 PLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQ-IGTPEEIYE 220 (232)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEe-cCCHHHHHh
Confidence 99999999999999988764 5799999999999999999999999999974 777776654
No 255
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.1e-38 Score=320.62 Aligned_cols=212 Identities=27% Similarity=0.450 Sum_probs=161.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechHH------HHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDEE------RLKLEK 144 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~~------~~~~~~ 144 (582)
+|+++||+++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+... ..+... ......
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK11264 3 AIEVKNLVKKFHGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQ 82 (250)
T ss_pred cEEEeceEEEECCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHH
Confidence 6999999999998899999999999999999999999999999999999988876543210 011100 000111
Q ss_pred HHHHhcc--ccCC---CcchHHHHHHH---HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhc
Q 007982 145 EAEILGA--QEDG---GGEQLERVYER---LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFI 216 (582)
Q Consensus 145 ~~~~~~~--~~~~---~~~~~~~~~~~---l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~ 216 (582)
....+++ +... .....+++... ...........++.++++.+|+.. ..++++.+|||||||||+|||||+.
T Consensus 83 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~Gq~qrv~la~al~~ 161 (250)
T PRK11264 83 LRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAG-KETSYPRRLSGGQQQRVAIARALAM 161 (250)
T ss_pred hhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcc-hhhCChhhCChHHHHHHHHHHHHhc
Confidence 1122222 2111 12233333221 112233344567889999999974 4678999999999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 217 NPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 217 ~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+|++|||||||++||+.++.++.++|.++ +.|||++|||++++..+||++++|++|+++ +.|+.+++.
T Consensus 162 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 232 (250)
T PRK11264 162 RPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIV-EQGPAKALF 232 (250)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHh
Confidence 99999999999999999999999988764 679999999999999999999999999997 457766554
No 256
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.1e-38 Score=335.68 Aligned_cols=196 Identities=22% Similarity=0.260 Sum_probs=165.4
Q ss_pred EEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------------ee
Q 007982 371 EVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------------------LR 431 (582)
Q Consensus 371 ~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------------------~~ 431 (582)
++.+.|+ ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+.+. ..
T Consensus 29 ~~~~~~g-~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~ 107 (382)
T TIGR03415 29 EILDETG-LVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHR 107 (382)
T ss_pred HHHHhhC-CEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCC
Confidence 3445564 457899999999999999999999999999999999999999999988652 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcC-----CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEY-----PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
++|++|++. +.+..|+.+++.... +.. ..+++.++++.+||.+... +++.+|||||||||+|||||+.+|+
T Consensus 108 i~~vfQ~~~--l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~-~~~~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 108 VSMVFQKFA--LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWAD-KKPGELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred EEEEECCCc--CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhc-CChhhCCHHHHHHHHHHHHHhcCCC
Confidence 889999864 445578888765321 111 2356788999999986554 5568999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
||||||||++||+.++..+.+.|.++ +.|||+||||++++.++||+|++|++|+++. .|+++++.
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~-~g~~~ei~ 253 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQ-HGTPEEIV 253 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHHh
Confidence 99999999999999999999988664 6799999999999999999999999999974 78888775
No 257
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.2e-38 Score=331.60 Aligned_cols=209 Identities=22% Similarity=0.339 Sum_probs=163.4
Q ss_pred ceEEeeeEEEECC-------------eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHH
Q 007982 72 DIRIESLSVTFHG-------------HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEE 138 (582)
Q Consensus 72 ~i~v~nls~~y~~-------------~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~ 138 (582)
+|+++||+++|+. ..+++|+||+|++||+++|+|+||||||||+++|+|+.+++.|.+. +++.
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~----~~G~ 83 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVA----WLGK 83 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEE----ECCE
Confidence 7999999999962 4699999999999999999999999999999999999988765432 2221
Q ss_pred HH------HHHHHHHHhc--cccC-----CCcchHHHHHHHHH----cCChhHHHHHHHHHHHhCCCChhhhhccCCCCC
Q 007982 139 RL------KLEKEAEILG--AQED-----GGGEQLERVYERLE----ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFS 201 (582)
Q Consensus 139 ~~------~~~~~~~~~~--~~~~-----~~~~~~~~~~~~l~----~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LS 201 (582)
.. ........+. +|.. +.....+++.+.+. .+...+...++.++++.+|+.....++++++||
T Consensus 84 ~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p~~LS 163 (331)
T PRK15079 84 DLLGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRYPHEFS 163 (331)
T ss_pred ECCcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCCcccCC
Confidence 11 1111111222 2221 11233344433322 234455667889999999996556789999999
Q ss_pred hhHHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEE
Q 007982 202 GGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFY 277 (582)
Q Consensus 202 GGqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~ 277 (582)
|||+|||+|||||+.+|++|||||||++||+.++..+.++|+++ +.|+|+||||++++..+||+|++|.+|+++.
T Consensus 164 gG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive- 242 (331)
T PRK15079 164 GGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVE- 242 (331)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-
Confidence 99999999999999999999999999999999999999988654 6799999999999999999999999999974
Q ss_pred cCChhHHH
Q 007982 278 TGNFDQYV 285 (582)
Q Consensus 278 ~g~~~~~~ 285 (582)
.|+.+++.
T Consensus 243 ~g~~~~i~ 250 (331)
T PRK15079 243 LGTYDEVY 250 (331)
T ss_pred EcCHHHHH
Confidence 56766554
No 258
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3e-39 Score=316.82 Aligned_cols=200 Identities=24% Similarity=0.363 Sum_probs=155.0
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhcc
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILGA 151 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~ 151 (582)
|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++.... .......+++
T Consensus 1 i~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~----~~g~~~~~~~~~~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGNVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIY----IGGRDVTDLPPKDRDIAM 76 (213)
T ss_pred CEEEeeEEEECCeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEECCcCCcccceEEE
Confidence 5789999999998999999999999999999999999999999999999888765432 2111100 0000011221
Q ss_pred --ccC---CCcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeec
Q 007982 152 --QED---GGGEQLERVYER--LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLD 224 (582)
Q Consensus 152 --~~~---~~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLD 224 (582)
+.. ......+++... ...........++.++++.+|+.. ..++++.+||||||||++|||||+.+|++||||
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qr~~laral~~~p~llllD 155 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEH-LLDRKPKQLSGGQRQRVALGRAIVREPKVFLMD 155 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHH-HHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 111 111223333221 112334445567889999999974 568899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEE
Q 007982 225 EPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFY 277 (582)
Q Consensus 225 EPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~ 277 (582)
|||++||+.++.++.+.|+++ +.|||++|||++++..+||++++|++|+++.+
T Consensus 156 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~ 212 (213)
T cd03301 156 EPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQI 212 (213)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEec
Confidence 999999999999999998764 67999999999999999999999999999753
No 259
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=7.4e-39 Score=315.18 Aligned_cols=200 Identities=25% Similarity=0.396 Sum_probs=156.5
Q ss_pred ceEEeeeEEEECCe----eeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH--HHHH
Q 007982 72 DIRIESLSVTFHGH----DLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK--LEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~----~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~--~~~~ 145 (582)
+|+++|++++|+++ ++|+++||+|++|++++|+|+||||||||+++|+|+.+++.|.+. +++.... ....
T Consensus 1 ~l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~----~~g~~~~~~~~~~ 76 (218)
T cd03266 1 MITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFAT----VDGFDVVKEPAEA 76 (218)
T ss_pred CeEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEE----ECCEEcccCHHHH
Confidence 47899999999876 899999999999999999999999999999999999988766432 2211110 0111
Q ss_pred HHHhcc--ccCC---CcchHHHHHH--HHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 146 AEILGA--QEDG---GGEQLERVYE--RLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 146 ~~~~~~--~~~~---~~~~~~~~~~--~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
...+++ +... .....+++.. ............++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~laral~~~p 155 (218)
T cd03266 77 RRRLGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEE-LLDRRVGGFSTGMRQKVAIARALVHDP 155 (218)
T ss_pred HhhEEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHH-HHhhhhhhcCHHHHHHHHHHHHHhcCC
Confidence 122322 2211 1123333321 1112333455678899999999964 568899999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
++|||||||++||+.++.++.++|+++ +.|+|+||||++++..+||++++|++|+++.
T Consensus 156 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~ 216 (218)
T cd03266 156 PVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVY 216 (218)
T ss_pred CEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEee
Confidence 999999999999999999999999775 5799999999999999999999999999863
No 260
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=318.35 Aligned_cols=202 Identities=22% Similarity=0.289 Sum_probs=167.8
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC---CCCcEEEEcCc-----------ee
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV---PLDGMVRRHNH-----------LR 431 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~---p~~G~i~~~~~-----------~~ 431 (582)
+++++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|...+. ..
T Consensus 2 ~~~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 80 (246)
T PRK14269 2 IAKTTNLNLFYGK-KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKN 80 (246)
T ss_pred ceeeeeeEEEECC-EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhh
Confidence 5789999999964 679999999999999999999999999999999999974 69999987652 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhc--C-C-----CChHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHHHHHH
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKE--Y-P-----GNEEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~--~-~-----~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~lAral 500 (582)
++|++|... +. ..++.+++... . . ....+++.++++.+++... ....++.+|||||+|||+|||||
T Consensus 81 i~~~~q~~~--l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral 157 (246)
T PRK14269 81 VGMVFQQPN--VF-VKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARAL 157 (246)
T ss_pred EEEEecCCc--cc-cccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHH
Confidence 789988753 22 35777776421 1 1 1123457788999999532 22345689999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.++||+|++|++|+++. .|+..++..
T Consensus 158 ~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 230 (246)
T PRK14269 158 AIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIE-FGESKEFFE 230 (246)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEE-ECCHHHHHh
Confidence 9999999999999999999999999999875 6799999999999999999999999999974 688777653
No 261
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=321.84 Aligned_cols=209 Identities=27% Similarity=0.421 Sum_probs=162.8
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-----------
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL----------- 140 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~----------- 140 (582)
.|+++||++.|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+.+++.|.+. +++...
T Consensus 5 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~----~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 5 KLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIV----VNGQTINLVRDKDGQLK 80 (257)
T ss_pred cEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEE----ECCEEcccccccccccc
Confidence 68999999999999999999999999999999999999999999999999888765432 221111
Q ss_pred -----HHHHHHHHhcc--ccCC---CcchHHHHHHH---HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHH
Q 007982 141 -----KLEKEAEILGA--QEDG---GGEQLERVYER---LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMR 207 (582)
Q Consensus 141 -----~~~~~~~~~~~--~~~~---~~~~~~~~~~~---l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqR 207 (582)
........+.+ +... .....+++... +........+.++.++++.+|+.....++++.+||||||||
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~G~~qr 160 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKYPVHLSGGQQQR 160 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHH
Confidence 00111122322 2111 12333443211 11233445567789999999997544478899999999999
Q ss_pred HHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 208 IALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 208 v~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++++
T Consensus 161 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 239 (257)
T PRK10619 161 VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIE-EEGAPEQL 239 (257)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHh
Confidence 99999999999999999999999999999999998765 679999999999999999999999999997 45777665
Q ss_pred H
Q 007982 285 V 285 (582)
Q Consensus 285 ~ 285 (582)
.
T Consensus 240 ~ 240 (257)
T PRK10619 240 F 240 (257)
T ss_pred h
Confidence 4
No 262
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-38 Score=316.45 Aligned_cols=211 Identities=26% Similarity=0.387 Sum_probs=159.9
Q ss_pred ceEEeeeEEEECCe----eeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechHHH-HHHHHH
Q 007982 72 DIRIESLSVTFHGH----DLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDEER-LKLEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~----~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~~~-~~~~~~ 145 (582)
+|+++|++++|+++ ++|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+... ..+.... ......
T Consensus 1 ~i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (233)
T cd03258 1 MIELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKA 80 (233)
T ss_pred CeEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHH
Confidence 47899999999876 89999999999999999999999999999999999998876653211 0111000 001111
Q ss_pred HHHhcc--ccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 146 AEILGA--QEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 146 ~~~~~~--~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
...+++ +... .....+++.... ...........+.++++.+|+.+ ..++++.+|||||||||+|||||+.+|
T Consensus 81 ~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~la~al~~~p 159 (233)
T cd03258 81 RRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLED-KADAYPAQLSGGQKQRVGIARALANNP 159 (233)
T ss_pred HhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChh-hhhcChhhCCHHHHHHHHHHHHHhcCC
Confidence 122322 2211 122333332221 12233344567889999999974 567899999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++
T Consensus 160 ~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 228 (233)
T cd03258 160 KVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVE-EGTVEEV 228 (233)
T ss_pred CEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHH
Confidence 999999999999999999999998764 5799999999999999999999999999974 4665543
No 263
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=323.04 Aligned_cols=205 Identities=23% Similarity=0.325 Sum_probs=168.2
Q ss_pred CCeEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------ee
Q 007982 364 PPVLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LR 431 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~ 431 (582)
+++|+++|+++.|++. +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..
T Consensus 5 ~~~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (269)
T PRK13648 5 NSIIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKH 84 (269)
T ss_pred CceEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 5689999999999743 45899999999999999999999999999999999999999999987652 14
Q ss_pred EEEechhhhhhcCCcccHHHHHHhc---C--CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKE---Y--PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~---~--~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
++|++|..... .+..++.+++... . .. ...+++.++++.+|+.+... .++.+|||||+|||+||||++.+|+
T Consensus 85 i~~v~q~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~qrl~laral~~~p~ 162 (269)
T PRK13648 85 IGIVFQNPDNQ-FVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERAD-YEPNALSGGQKQRVAIAGVLALNPS 162 (269)
T ss_pred eeEEEeChHHh-cccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhh-CCcccCCHHHHHHHHHHHHHHcCCC
Confidence 78888875321 2234444443221 1 11 12345778899999976554 4568999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|||||||+|||+.++..+.+.|+++ +.|||+||||++++.. ||+|++|++|+++ ..|+++++..
T Consensus 163 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~-~~g~~~~~~~ 231 (269)
T PRK13648 163 VIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVY-KEGTPTEIFD 231 (269)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-CCEEEEEECCEEE-EecCHHHHhc
Confidence 99999999999999999999988764 5699999999999975 9999999999997 4788877654
No 264
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-38 Score=323.21 Aligned_cols=205 Identities=19% Similarity=0.273 Sum_probs=168.5
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc--------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH-------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~-------- 429 (582)
++++|+++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+.+.
T Consensus 36 ~~~~l~i~~l~~~~~~-~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 36 GETVIEARDLNVFYGD-EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred CCceEEEEEEEEEECC-EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 5678999999999964 679999999999999999999999999999999999987 68999987542
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhc-----CCCChHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKE-----YPGNEEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|+.. +.. .++.+++... .+....+++.++++.+|+... ....++.+|||||||||+|
T Consensus 115 ~~~~~~~i~~v~q~~~--l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~L 191 (285)
T PRK14254 115 PVALRRRIGMVFQKPN--PFP-KSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLCI 191 (285)
T ss_pred hHhhhccEEEEecCCc--cCc-CCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHHH
Confidence 24788888753 222 3677665421 111124567889999998531 2245668999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEE-EEeCCeEEEEcCCHHHHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIW-VCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~-~l~~G~i~~~~g~~~~~~~ 572 (582)
||||+.+|+||||||||+|||+.++..+.++|+++ +.|||+||||++++..+|||++ +|++|+++ ..|+..++..
T Consensus 192 AraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~-~~g~~~~~~~ 269 (285)
T PRK14254 192 ARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELV-EFDDTDKIFE 269 (285)
T ss_pred HHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEE-EeCCHHHHHh
Confidence 99999999999999999999999999999999887 4699999999999999999975 57999997 4788777643
No 265
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-39 Score=299.97 Aligned_cols=202 Identities=26% Similarity=0.380 Sum_probs=168.1
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCce-----------eEEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHL-----------RIAQ 434 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~-----------~~~~ 434 (582)
||+++|++++..+ +.+++++||++.+||++||+||||||||||||.|+|.+.|++|++.+.+.. ..+.
T Consensus 1 mi~a~nls~~~~G-r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 1 MIRAENLSYSLAG-RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred CeeeeeeEEEeec-ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 5889999999864 679999999999999999999999999999999999999999999887642 2456
Q ss_pred echhhhhhcCCcccHHHHHHhc-CC----C---ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHcc----
Q 007982 435 FHQHLAEKLDMDMSALQYMIKE-YP----G---NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYR---- 502 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~-~~----~---~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~---- 502 (582)
++|+.. +.+..++.+.+... .+ . .+.+-++++|.+.++.++..+ -+.+|||||||||.|||.|++
T Consensus 80 lpQ~s~--laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R-~y~~LSGGEqQRVqlARvLaQl~~~ 156 (259)
T COG4559 80 LPQNSS--LAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGR-DYRTLSGGEQQRVQLARVLAQLWPP 156 (259)
T ss_pred cccCcc--cccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhcc-chhhcCchHHHHHHHHHHHHHccCC
Confidence 677643 44556777665432 11 1 123347889999999887654 457999999999999999975
Q ss_pred --CCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 503 --QPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 503 --~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++++|+|||||+.||+.....++++.+++ +++|+.|-||++++..+||||++|.+|+++. .|++.+...
T Consensus 157 v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a-~g~p~~vlt 230 (259)
T COG4559 157 VPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIA-SGSPQDVLT 230 (259)
T ss_pred CCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEee-cCCHHHhcC
Confidence 45699999999999999998888887776 6789999999999999999999999999975 899888754
No 266
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=324.60 Aligned_cols=205 Identities=22% Similarity=0.338 Sum_probs=170.5
Q ss_pred CCeEEEEEEEEEecC-CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCC---cEEEEcCc----------
Q 007982 364 PPVLQFVEVTFGYTP-DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLD---GMVRRHNH---------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~-~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~---G~i~~~~~---------- 429 (582)
.++|+++|+++.|++ .+++|+++||+|.+|++++|+||||||||||+++|+|+++|++ |+|...+.
T Consensus 3 ~~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 3 DNIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred CceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 457999999999964 2469999999999999999999999999999999999999997 89986542
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc--CCCC----hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHcc
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE--YPGN----EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 502 (582)
..++|++|.+.. ..+..++.+++... .... ..+++.++++.+||.+... +++.+|||||+|||+|||||+.
T Consensus 83 ~~~ig~v~q~~~~-~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~-~~~~~LS~G~~qrv~laral~~ 160 (282)
T PRK13640 83 REKVGIVFQNPDN-QFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYID-SEPANLSGGQKQRVAIAGILAV 160 (282)
T ss_pred HhheEEEEECHHH-hhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhc-CCcccCCHHHHHHHHHHHHHHc
Confidence 247899887632 22356777776421 1111 1245788999999986554 5568999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++. .||++++|++|+++. .|+++++..
T Consensus 161 ~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~-~g~~~~~~~ 232 (282)
T PRK13640 161 EPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLA-QGSPVEIFS 232 (282)
T ss_pred CCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEE-eCCHHHHhc
Confidence 99999999999999999999999998764 569999999999995 799999999999974 788877654
No 267
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=319.02 Aligned_cols=203 Identities=22% Similarity=0.283 Sum_probs=166.8
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCC---CCC--CCcEEEEcCc----------
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGD---LVP--LDGMVRRHNH---------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl---~~p--~~G~i~~~~~---------- 429 (582)
++|+++|+++.|+. +.+|+|+||+|.+|++++|+||||||||||+++|+|+ ++| ++|+|.+.+.
T Consensus 2 ~~l~~~~~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 2 VKIDARDVNFWYGD-FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred cEEEEEEEEEEECC-EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 68999999999964 6799999999999999999999999999999999997 454 5899976542
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc--CC---CC--hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE--YP---GN--EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~---~~--~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|... +. ..++.+++... .. .. ..+.+.++++.+|+... ....++.+|||||||||+|
T Consensus 81 ~~~~~i~~v~q~~~--~~-~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 157 (250)
T PRK14245 81 ELRKNVGMVFQRPN--PF-PKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCI 157 (250)
T ss_pred HHhhheEEEecCCc--cC-cccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHH
Confidence 13788888753 22 24777665421 11 11 23457788999998542 2345678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ +.|+++++.+
T Consensus 158 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~-~~~~~~~~~~ 234 (250)
T PRK14245 158 ARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMV-EYDDTKKIFT 234 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEE-EECCHHHHhc
Confidence 99999999999999999999999999999999876 469999999999999999999999999997 5788887753
No 268
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=320.73 Aligned_cols=205 Identities=22% Similarity=0.275 Sum_probs=168.8
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC--C---CCcEEEEcCc--------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV--P---LDGMVRRHNH-------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~--p---~~G~i~~~~~-------- 429 (582)
+.++|+++|+++.|++ +.+|+|+||+|.+||+++|+||||||||||+++|+|+++ | ++|+|.+.+.
T Consensus 9 ~~~~l~i~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~ 87 (259)
T PRK14274 9 KQEVYQINGMNLWYGQ-HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVD 87 (259)
T ss_pred CCceEEEeeEEEEECC-eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccC
Confidence 4678999999999964 579999999999999999999999999999999999987 3 5899976542
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhc--CCC--C---hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKE--YPG--N---EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRV 494 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~--~---~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv 494 (582)
..++|++|... +.. .++.+++... ... . ..+++.++++.+++... ....++.+|||||+|||
T Consensus 88 ~~~~~~~i~~v~q~~~--~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv 164 (259)
T PRK14274 88 LVELRKNIGMVFQKGN--PFP-QSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRL 164 (259)
T ss_pred HHHHhhceEEEecCCc--ccc-cCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHH
Confidence 23788888753 222 3777765421 111 1 12346778899998531 23456789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 495 VFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 495 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|||+|+.+|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|+++ ..|+++++..
T Consensus 165 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 243 (259)
T PRK14274 165 CIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELV-ECNDTNKMFS 243 (259)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEE-EECCHHHHhh
Confidence 9999999999999999999999999999999999876 479999999999999999999999999997 4789888754
No 269
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=318.88 Aligned_cols=204 Identities=19% Similarity=0.216 Sum_probs=168.5
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~--------- 429 (582)
+|+|+++|+++.|++ +.+|+|+||+|.+|++++|+|+||||||||+++|+|+++| ++|+|.+.+.
T Consensus 2 ~~~l~~~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 2 KIKMESKNLNLWYGE-KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred ccEEEEEEeEEEECC-eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 478999999999964 6799999999999999999999999999999999999875 7999987542
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhc---CC--CC--hHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKE---YP--GN--EEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~--~~--~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 495 (582)
..++|++|... +. ..++.+++... .. .. ..+++.++++.+|+.. .....++.+|||||||||+
T Consensus 81 ~~~~~~i~~~~q~~~--~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 157 (251)
T PRK14270 81 VELRKRVGMVFQKPN--PF-PMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLC 157 (251)
T ss_pred HHHHhheEEEecCCC--cC-CCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHH
Confidence 23788888753 22 36777766421 11 11 1245678899998742 1234567899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||+++.+|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|+++ +.|+.++...
T Consensus 158 laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~ 235 (251)
T PRK14270 158 IARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLI-EFNKTEKIFL 235 (251)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEE-EeCCHHHHhc
Confidence 999999999999999999999999999999999876 478999999999999999999999999997 4788877653
No 270
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-38 Score=318.14 Aligned_cols=204 Identities=22% Similarity=0.312 Sum_probs=167.2
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCC--CC---CCcEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDL--VP---LDGMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~--~p---~~G~i~~~~~--------- 429 (582)
.++|+++|++++|++ +.+|+|+||+|.+||+++|+||||||||||+++|+|+. .| ++|+|.+.+.
T Consensus 3 ~~~l~~~~l~~~~~~-~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 3 EPILQVSDLSVYYNK-KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred CceEEEEeeEEEECC-eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 458999999999964 57999999999999999999999999999999999985 46 4899987542
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhc---CC--CC--hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKE---YP--GN--EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~--~~--~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~ 495 (582)
..++|++|... + +..++.+++... .. .. ..+.+.++++.+++... ....++.+|||||||||+
T Consensus 82 ~~~~~~i~~v~q~~~--~-~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 158 (252)
T PRK14239 82 VDLRKEIGMVFQQPN--P-FPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVC 158 (252)
T ss_pred HhhhhcEEEEecCCc--c-CcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHH
Confidence 24788888753 2 235777776421 11 11 13456778889987431 224566899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||+.+|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|+++ ..|+..++..
T Consensus 159 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 236 (252)
T PRK14239 159 IARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLI-EYNDTKQMFM 236 (252)
T ss_pred HHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 999999999999999999999999999999999876 479999999999999999999999999997 4788887753
No 271
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-39 Score=325.03 Aligned_cols=208 Identities=20% Similarity=0.298 Sum_probs=160.4
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-----HHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-----KLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~ 146 (582)
||+++||+++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++... ......
T Consensus 1 ml~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~i~~~~~~~~~~~ 76 (271)
T PRK13638 1 MLATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVL----WQGKPLDYSKRGLLALR 76 (271)
T ss_pred CeEEEEEEEEcCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEE----ECCEEcccccCCHHHHH
Confidence 48899999999988899999999999999999999999999999999999988766432 221111 001111
Q ss_pred HHhcc--ccCC---C-cchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 147 EILGA--QEDG---G-GEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 147 ~~~~~--~~~~---~-~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
..+++ +... . ....+++..... .........++.++++.+|+.+ ..++++.+||||||||++|||||+.+|
T Consensus 77 ~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrl~laraL~~~p 155 (271)
T PRK13638 77 QQVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQH-FRHQPIQCLSHGQKKRVAIAGALVLQA 155 (271)
T ss_pred hheEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHh-HhcCCchhCCHHHHHHHHHHHHHHcCC
Confidence 22322 2111 1 112222221111 2233344566888999999964 567899999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 156 ~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 224 (271)
T PRK13638 156 RYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILT-HGAPGEVF 224 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999998775 5799999999999999999999999999974 56766654
No 272
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=329.28 Aligned_cols=215 Identities=21% Similarity=0.289 Sum_probs=163.9
Q ss_pred cceEEeeeEEEECC-----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechHH------
Q 007982 71 RDIRIESLSVTFHG-----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDEE------ 138 (582)
Q Consensus 71 ~~i~v~nls~~y~~-----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~~------ 138 (582)
.+|+++|+++.|++ ..+|+|+||+|++|++++|+|+||||||||+++|+|+.+++.|.+... ..+...
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 37999999999974 369999999999999999999999999999999999998876654211 011100
Q ss_pred -------H-HHHHHHHHHhc--cccCC----CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCCh
Q 007982 139 -------R-LKLEKEAEILG--AQEDG----GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSG 202 (582)
Q Consensus 139 -------~-~~~~~~~~~~~--~~~~~----~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSG 202 (582)
. .........++ ++.+. .....+++..... ..+......++.++++.+|+.....++.+.+|||
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~LSg 179 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSYLERSPFGLSG 179 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhHhcCCcccCCH
Confidence 0 01111122233 22211 1122333322211 2334455678899999999964456889999999
Q ss_pred hHHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcC
Q 007982 203 GWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTG 279 (582)
Q Consensus 203 GqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g 279 (582)
||||||+|||||+.+|++|||||||++||+.++.++.+.|.++ +.|||+||||++++..+||+|++|++|+++ ..|
T Consensus 180 GqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~i~-~~g 258 (320)
T PRK13631 180 GQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGKIL-KTG 258 (320)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeC
Confidence 9999999999999999999999999999999999999998754 679999999999999999999999999997 467
Q ss_pred ChhHHHH
Q 007982 280 NFDQYVQ 286 (582)
Q Consensus 280 ~~~~~~~ 286 (582)
+.+++..
T Consensus 259 ~~~~~~~ 265 (320)
T PRK13631 259 TPYEIFT 265 (320)
T ss_pred CHHHHhc
Confidence 7776654
No 273
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=317.43 Aligned_cols=208 Identities=23% Similarity=0.327 Sum_probs=158.0
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAEI 148 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 148 (582)
.|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++... ........
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~i~~~~~~~~~~~ 78 (241)
T PRK14250 3 EIEFKEVSYSSFGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSIL----IDGVDIKTIDVIDLRRK 78 (241)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE----ECCEEhhhcChHHhhhc
Confidence 58999999999988999999999999999999999999999999999999888766432 222111 11111122
Q ss_pred hccccCCCcchHHHHHHHHHcC--ChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCC
Q 007982 149 LGAQEDGGGEQLERVYERLEAL--DASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEP 226 (582)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEP 226 (582)
+++.++........+.+.+... .......++.++++.+|+.....++++.+|||||||||+|||||+.+|++||||||
T Consensus 79 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEP 158 (241)
T PRK14250 79 IGMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEP 158 (241)
T ss_pred EEEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 2221111110011333332210 01112356788999999964456889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 227 TNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 227 t~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|++||+.++.++.+.|+++ +.|||++|||++++..+||+|++|++|+++.. |..+++
T Consensus 159 t~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~-~~~~~~ 219 (241)
T PRK14250 159 TSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEY-AKTYDF 219 (241)
T ss_pred cccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEe-CCHHHH
Confidence 9999999999999988764 68999999999999999999999999999754 555444
No 274
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.9e-39 Score=314.80 Aligned_cols=194 Identities=26% Similarity=0.396 Sum_probs=150.5
Q ss_pred EEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhcc--
Q 007982 74 RIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILGA-- 151 (582)
Q Consensus 74 ~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-- 151 (582)
+++||+++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+|+.|.+ .+++.... .....+++
T Consensus 1 ~~~~l~~~~~~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i----~~~g~~~~--~~~~~i~~v~ 74 (213)
T cd03235 1 EVEDLTVSYGGHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSI----RVFGKPLE--KERKRIGYVP 74 (213)
T ss_pred CcccceeEECCEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEE----EECCccHH--HHHhheEEec
Confidence 36899999998899999999999999999999999999999999999988875543 33332221 11112222
Q ss_pred ccCCC-----cchHHHHHHHHHc------CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCc
Q 007982 152 QEDGG-----GEQLERVYERLEA------LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTI 220 (582)
Q Consensus 152 ~~~~~-----~~~~~~~~~~l~~------~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~l 220 (582)
+.... ....+++...... ........++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++
T Consensus 75 q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~la~al~~~p~l 153 (213)
T cd03235 75 QRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSE-LADRQIGELSGGQQQRVLLARALVQDPDL 153 (213)
T ss_pred cccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHH-HHhCCcccCCHHHHHHHHHHHHHHcCCCE
Confidence 21111 1223333211110 011234567889999999964 56889999999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeE
Q 007982 221 LLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQL 274 (582)
Q Consensus 221 LlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i 274 (582)
|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|.+
T Consensus 154 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~~~ 210 (213)
T cd03235 154 LLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRTVV 210 (213)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCcEe
Confidence 9999999999999999999998775 47999999999999999999999998743
No 275
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-39 Score=353.26 Aligned_cols=203 Identities=24% Similarity=0.330 Sum_probs=172.1
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------ee
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LR 431 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~ 431 (582)
.++|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+|+|+|+++|++|+|.+.+. ..
T Consensus 3 ~~~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 3 TPYISMAGIGKSFGP-VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred CceEEEeeeEEEcCC-eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 368999999999964 67999999999999999999999999999999999999999999987542 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcC------CC-------ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHH
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEY------PG-------NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAW 498 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~------~~-------~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAr 498 (582)
++|++|... +....++.+++.... .. ...+++.++++.+|+.... ++++.+|||||||||+|||
T Consensus 82 i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LSgG~~qrv~ia~ 158 (510)
T PRK09700 82 IGIIYQELS--VIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDL-DEKVANLSISHKQMLEIAK 158 (510)
T ss_pred eEEEeeccc--ccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCc-ccchhhCCHHHHHHHHHHH
Confidence 889988753 334567777664211 01 1134578899999997654 5677999999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 499 LAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 499 al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
||+.+|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ +.|+++++.
T Consensus 159 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~ 233 (510)
T PRK09700 159 TLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSV-CSGMVSDVS 233 (510)
T ss_pred HHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEe-eecchhhCC
Confidence 999999999999999999999999999988765 579999999999999999999999999996 688887753
No 276
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=7.3e-39 Score=339.40 Aligned_cols=208 Identities=24% Similarity=0.361 Sum_probs=162.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAEI 148 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 148 (582)
+|+++||+++|+++.+|+++||+|++||+++|+||||||||||||+|+|+.+|+.|.+. +++... ........
T Consensus 3 ~L~~~nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~----l~G~~i~~~~~~~~~~~ 78 (402)
T PRK09536 3 MIDVSDLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVL----VAGDDVEALSARAASRR 78 (402)
T ss_pred eEEEeeEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEE----ECCEEcCcCCHHHHhcc
Confidence 69999999999999999999999999999999999999999999999999988766432 221110 11111122
Q ss_pred hcc--ccCC---CcchHHHHHHHH----HcCC--hhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 149 LGA--QEDG---GGEQLERVYERL----EALD--ASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~~~l----~~~~--~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
+++ +... .....+++.... ..+. .....+++.++++.+|+.+ +.++++.+|||||||||+|||||+++
T Consensus 79 ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~-~~~~~~~~LSgGerQRv~IArAL~~~ 157 (402)
T PRK09536 79 VASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQ-FADRPVTSLSGGERQRVLLARALAQA 157 (402)
T ss_pred eEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCch-hhcCChhhCCHHHHHHHHHHHHHHcC
Confidence 222 2111 122333332110 0111 2344567899999999974 67899999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|++|||||||++||+.++..++++|+++ +.|||++|||++++..+|||+++|++|+++. .|+++++.
T Consensus 158 P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~-~G~~~ev~ 227 (402)
T PRK09536 158 TPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRA-AGPPADVL 227 (402)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-ecCHHHHh
Confidence 9999999999999999999999998765 5799999999999999999999999999974 67776654
No 277
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.2e-38 Score=315.22 Aligned_cols=192 Identities=23% Similarity=0.343 Sum_probs=159.9
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeE
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRI 432 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~ 432 (582)
+++|+++|+++.|++ +.+++|+||+|.+||+++|+||||||||||+++|+|+++|++|+|.+.+. ..+
T Consensus 5 ~~~i~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 5 SPLLQLQNVGYLAGD-AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred CceEEEeccEEeeCC-ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 468999999999964 67999999999999999999999999999999999999999999987652 247
Q ss_pred EEechhhhhhcCCcccHHHHHHhc---CC-CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKE---YP-GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLL 508 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 508 (582)
+|++|... + +..++.+++... .. ....+.+.++++.+|+.....+.++.+|||||+|||+|||||+.+|++||
T Consensus 84 ~~~~q~~~--l-~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lll 160 (225)
T PRK10247 84 SYCAQTPT--L-FGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKVLL 160 (225)
T ss_pred EEEecccc--c-ccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88888743 2 234777766421 11 12345678899999996433356778999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEe--CCeE
Q 007982 509 LDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCE--NQAV 560 (582)
Q Consensus 509 LDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~--~G~i 560 (582)
|||||+|||+.++..+.+.|.++ +.|||+||||++++. .||++++|+ .|+|
T Consensus 161 lDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d~i~~l~~~~~~~ 217 (225)
T PRK10247 161 LDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEM 217 (225)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCCEEEEEecccchH
Confidence 99999999999999999988764 569999999999995 699999996 4444
No 278
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.3e-38 Score=317.24 Aligned_cols=206 Identities=25% Similarity=0.371 Sum_probs=157.6
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHH-HHH
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKE-AEI 148 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~-~~~ 148 (582)
|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ..... ...
T Consensus 1 l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~----~~g~~~~~~~~~~~~~~~ 76 (236)
T cd03219 1 LEVRGLTKRFGGLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVL----FDGEDITGLPPHEIARLG 76 (236)
T ss_pred CeeeeeEEEECCEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEE----ECCEECCCCCHHHHHhcC
Confidence 4689999999988899999999999999999999999999999999999888765432 211110 00010 111
Q ss_pred hcc--ccCC---CcchHHHHHHHHHcC------------ChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHH
Q 007982 149 LGA--QEDG---GGEQLERVYERLEAL------------DASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~~~l~~~------------~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LA 211 (582)
+++ +... .....+++....... .......++.++++.+|+.. ..++++.+|||||||||+||
T Consensus 77 i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 77 IGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLAD-LADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccc-hhhCChhhCCHHHHHHHHHH
Confidence 221 2111 112333332211111 12334567889999999974 56889999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++ ..|+.+++
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 230 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVI-AEGTPDEV 230 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEE-eecCHHHh
Confidence 9999999999999999999999999999999764 579999999999999999999999999996 45665544
No 279
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.6e-38 Score=317.56 Aligned_cols=208 Identities=25% Similarity=0.380 Sum_probs=161.2
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-----HHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-----KLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~ 146 (582)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ......
T Consensus 1 ~l~~~~l~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~----~~g~~~~~~~~~~~~~~ 76 (240)
T PRK09493 1 MIEFKNVSKHFGPTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLI----VDGLKVNDPKVDERLIR 76 (240)
T ss_pred CEEEEeEEEEECCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEECCcCChhHHHHh
Confidence 47899999999988999999999999999999999999999999999999888765432 221110 011111
Q ss_pred HHhcc--ccCC---CcchHHHHHHHH---HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 147 EILGA--QEDG---GGEQLERVYERL---EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 147 ~~~~~--~~~~---~~~~~~~~~~~l---~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
..+++ +... .....+++.... ..........++.++++.+|+.. ..++++.+|||||||||+|||||+.+|
T Consensus 77 ~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G~~qrv~la~al~~~p 155 (240)
T PRK09493 77 QEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAE-RAHHYPSELSGGQQQRVAIARALAVKP 155 (240)
T ss_pred hceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChH-HHhcChhhcCHHHHHHHHHHHHHhcCC
Confidence 12221 2111 122333332211 12233445567889999999964 568899999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
++|||||||++||+.++.++.++|+++ +.|+|++|||++++..+||++++|++|+++ +.|+++++.
T Consensus 156 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 224 (240)
T PRK09493 156 KLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIA-EDGDPQVLI 224 (240)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-eeCCHHHHh
Confidence 999999999999999999999998765 679999999999999999999999999997 457766554
No 280
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.6e-38 Score=311.86 Aligned_cols=191 Identities=26% Similarity=0.388 Sum_probs=161.5
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------eeEEE
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH--------LRIAQ 434 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~--------~~~~~ 434 (582)
++++|+++|++++|++ +.+++++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 8 ~~~~l~~~~l~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~~~~~~i~~ 86 (214)
T PRK13543 8 APPLLAAHALAFSRNE-EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRGDRSRFMAY 86 (214)
T ss_pred CcceEEEeeEEEecCC-ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccchhhhhceEE
Confidence 4578999999999964 57999999999999999999999999999999999999999999987653 13778
Q ss_pred echhhhhhcCCcccHHHHHHhc--C-CCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKE--Y-PGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
++|... +....++.+++... . .....+.++++++.+++.... +.++.+|||||||||+|||+++.+|++|||||
T Consensus 87 ~~q~~~--~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~laral~~~p~llllDE 163 (214)
T PRK13543 87 LGHLPG--LKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGYE-DTLVRQLSAGQKKRLALARLWLSPAPLWLLDE 163 (214)
T ss_pred eecCcc--cccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChhhc-cCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 887643 33445777665321 1 122345678899999998654 45678999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeC
Q 007982 512 PTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCEN 557 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~ 557 (582)
||++||+.++..+.+.|.++ +.|||++|||++++.++||++++++.
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 164 PYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 99999999999999998765 68999999999999999999999863
No 281
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.2e-38 Score=314.72 Aligned_cols=199 Identities=22% Similarity=0.325 Sum_probs=154.9
Q ss_pred ceEEeeeEEEE-CCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------HHHH
Q 007982 72 DIRIESLSVTF-HGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------KLEK 144 (582)
Q Consensus 72 ~i~v~nls~~y-~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~~~~ 144 (582)
+|+++|+++.| +++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ....
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~----~~g~~i~~~~~~~~~~ 76 (222)
T PRK10908 1 MIRFEHVSKAYLGGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIW----FSGHDITRLKNREVPF 76 (222)
T ss_pred CEEEEeeEEEecCCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEEcccCChhHHHH
Confidence 47899999999 677899999999999999999999999999999999999988765432 221111 0111
Q ss_pred HHHHhcc--ccCC---CcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 145 EAEILGA--QEDG---GGEQLERVYER--LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 145 ~~~~~~~--~~~~---~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
....+++ +... .....+++... ...........++.++++.+|+.+ ..++++.+|||||||||+|||||+.+
T Consensus 77 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~laral~~~ 155 (222)
T PRK10908 77 LRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLD-KAKNFPIQLSGGEQQRVGIARAVVNK 155 (222)
T ss_pred HHhheEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChh-hhhCCchhCCHHHHHHHHHHHHHHcC
Confidence 1122322 2211 11223333221 112333444557888999999975 56889999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEE
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLK 275 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~ 275 (582)
|++|||||||++||+.++..+.+.|.++ +.|+|+||||++++..+||++++|++|+++
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 156 PAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 9999999999999999999999988765 579999999999999999999999999985
No 282
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-38 Score=317.97 Aligned_cols=203 Identities=21% Similarity=0.294 Sum_probs=167.4
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC--C---CCcEEEEcCc-----------
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV--P---LDGMVRRHNH----------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~--p---~~G~i~~~~~----------- 429 (582)
.|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++ | ++|+|...+.
T Consensus 4 ~l~~~nl~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 82 (252)
T PRK14256 4 KVKLEQLNVHFGK-NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVS 82 (252)
T ss_pred EEEEEEEEEEeCC-eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHH
Confidence 5899999999964 679999999999999999999999999999999999986 4 6899986542
Q ss_pred --eeEEEechhhhhhcCCcccHHHHHHhcC-----CC-C-hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHHH
Q 007982 430 --LRIAQFHQHLAEKLDMDMSALQYMIKEY-----PG-N-EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 430 --~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~-~-~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~lA 497 (582)
..++|++|... +....++.+++...+ .. . ..+.+.++++.+|+... ....++.+|||||+|||+||
T Consensus 83 ~~~~i~~~~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~la 160 (252)
T PRK14256 83 IRRRVGMVFQKPN--PFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCIA 160 (252)
T ss_pred hhccEEEEecCCC--CCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHHH
Confidence 13788888743 334467777664211 11 1 13457788999998531 22356789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|++. ..|+.+++..
T Consensus 161 ral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 236 (252)
T PRK14256 161 RTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLV-ECGETKKIFT 236 (252)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 9999999999999999999999999999999876 569999999999999999999999999997 4788887653
No 283
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-39 Score=359.71 Aligned_cols=208 Identities=19% Similarity=0.295 Sum_probs=173.4
Q ss_pred CCCeEEEEEEEEEecC---CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------
Q 007982 363 PPPVLQFVEVTFGYTP---DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~---~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------- 429 (582)
.+++|+++|++++|+. ..++|+|+||+|.+|+++||+||||||||||+++|+|+++|++|.|.+.+.
T Consensus 9 ~~~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~ 88 (623)
T PRK10261 9 ARDVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVI 88 (623)
T ss_pred CCceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccc
Confidence 3578999999999963 246999999999999999999999999999999999999999999875431
Q ss_pred ---------------eeEEEechhhhhhcCCcccHHHHHHhc------CCCC-hHHHHHHHHHhcCCCC--ccccCCCCC
Q 007982 430 ---------------LRIAQFHQHLAEKLDMDMSALQYMIKE------YPGN-EEEKMRAAIGRFGLTG--KAQVMPMKN 485 (582)
Q Consensus 430 ---------------~~~~~~~q~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~l~~~gl~~--~~~~~~~~~ 485 (582)
..++|++|.+...+....++.+++... .... ..+++.++|+.+||.. ...++++.+
T Consensus 89 ~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~~~~ 168 (623)
T PRK10261 89 ELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQTILSRYPHQ 168 (623)
T ss_pred ccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChhhHHhCCCcc
Confidence 248899998643455557777776431 1111 2356788999999964 123456789
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEE
Q 007982 486 LSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVT 561 (582)
Q Consensus 486 LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 561 (582)
|||||||||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++.++||||++|++|+++
T Consensus 169 LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~ 248 (623)
T PRK10261 169 LSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAV 248 (623)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeec
Confidence 9999999999999999999999999999999999999998888764 579999999999999999999999999997
Q ss_pred EEcCCHHHHH
Q 007982 562 RWEGDIMDFK 571 (582)
Q Consensus 562 ~~~g~~~~~~ 571 (582)
. +|++.++.
T Consensus 249 ~-~g~~~~~~ 257 (623)
T PRK10261 249 E-TGSVEQIF 257 (623)
T ss_pred c-cCCHHHhh
Confidence 4 78887774
No 284
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-38 Score=322.75 Aligned_cols=204 Identities=20% Similarity=0.283 Sum_probs=169.6
Q ss_pred CeEEEEEEEEEecCC--ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------ee
Q 007982 365 PVLQFVEVTFGYTPD--NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LR 431 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~--~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~ 431 (582)
++|+++|++++|++. .++|+|+||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+.+. ..
T Consensus 3 ~~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 82 (277)
T PRK13642 3 KILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRK 82 (277)
T ss_pred ceEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcc
Confidence 379999999999742 35899999999999999999999999999999999999999999987642 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcC--CC-C---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCC
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEY--PG-N---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPH 505 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~--~~-~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~ 505 (582)
++|++|.... .....++.+++.... .. . ..+++..+++.+|+.... ++++.+|||||+|||+|||||+.+|+
T Consensus 83 i~~v~q~~~~-~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~lAraL~~~p~ 160 (277)
T PRK13642 83 IGMVFQNPDN-QFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFK-TREPARLSGGQKQRVAVAGIIALRPE 160 (277)
T ss_pred eEEEEECHHH-hhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHh-hCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 7888887532 223457777664211 11 1 124567889999997654 45678999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 506 MLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 506 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|||||||++||+.++..+.+.|.++ +.|||+||||++++. .||+|++|++|+++ ..|+++++..
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~-~~g~~~~~~~ 229 (277)
T PRK13642 161 IIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SSDRILVMKAGEII-KEAAPSELFA 229 (277)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEE-EeCCHHHHhc
Confidence 99999999999999999999998754 679999999999996 69999999999997 4788887754
No 285
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=330.62 Aligned_cols=213 Identities=22% Similarity=0.281 Sum_probs=160.7
Q ss_pred ceEEeeeEEEECC----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------H
Q 007982 72 DIRIESLSVTFHG----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~ 141 (582)
+|+++||++.|++ ..+|+||||+|++||++||||+||||||||+++|+|+.++......|.+.+++..+ .
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 6899999999976 47999999999999999999999999999999999998642111123333332211 0
Q ss_pred HHHHH-HHhc--cccCC-----CcchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCCh--hhhhccCCCCChhHHHHH
Q 007982 142 LEKEA-EILG--AQEDG-----GGEQLERVYERLE---ALDASTAEKRAAEILYGLGFNK--TMQAKKTRDFSGGWRMRI 208 (582)
Q Consensus 142 ~~~~~-~~~~--~~~~~-----~~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~--~~~~~~~~~LSGGqrqRv 208 (582)
..... ..++ +|... .......+.+.+. .....+.++++.++|+.+||.+ ...++++++|||||||||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~p~~LSgGq~QRv 162 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQRV 162 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHHHHHHH
Confidence 11110 1122 22211 1112223333332 2334556678999999999963 346789999999999999
Q ss_pred HHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 209 ALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 209 ~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
+|||||+.+|+|||+||||++||+.++..++++|+++ +.|+|+||||++++..+||+|++|.+|+|+. .|+.+++
T Consensus 163 ~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive-~g~~~~~ 241 (326)
T PRK11022 163 MIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE-TGKAHDI 241 (326)
T ss_pred HHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHH
Confidence 9999999999999999999999999999999988764 6799999999999999999999999999974 5666655
Q ss_pred H
Q 007982 285 V 285 (582)
Q Consensus 285 ~ 285 (582)
.
T Consensus 242 ~ 242 (326)
T PRK11022 242 F 242 (326)
T ss_pred h
Confidence 4
No 286
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=318.69 Aligned_cols=202 Identities=18% Similarity=0.285 Sum_probs=166.7
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc----------
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH---------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~---------- 429 (582)
++|+++|++++|+. +++|+++||+|.+||+++|+|+||||||||+++|+|+++ |++|+|...+.
T Consensus 3 ~~l~~~~l~~~~~~-~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 3 NIISAKDVHLSYGN-YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred ceEEEEeeEEEECC-eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 47999999999964 679999999999999999999999999999999999997 47999976542
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhcC-----CCC--hHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKEY-----PGN--EEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|... +. ..++.+++.... ... ..+.+.++++.+++.. ...+.++.+|||||+||++|
T Consensus 82 ~~~~~i~~~~q~~~--~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~l 158 (251)
T PRK14251 82 ELRKEVGMVFQQPT--PF-PFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICI 158 (251)
T ss_pred HhhccEEEEecCCc--cC-CCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHH
Confidence 13778888753 22 357777664211 111 1245677889999842 12245678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++. .|+.+++.
T Consensus 159 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 234 (251)
T PRK14251 159 ARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIE-AGPTEEMF 234 (251)
T ss_pred HHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999876 5799999999999999999999999999974 68877764
No 287
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.2e-38 Score=312.58 Aligned_cols=201 Identities=27% Similarity=0.446 Sum_probs=153.8
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechHHHHHHHHHHHHhcc
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDEERLKLEKEAEILGA 151 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~ 151 (582)
|+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+... ................+++
T Consensus 1 l~~~~l~~~~~~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~ 80 (213)
T cd03262 1 IEIKNLHKSFGDFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKVGM 80 (213)
T ss_pred CEEEEEEEEECCeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcceE
Confidence 478999999998899999999999999999999999999999999999998876643210 0110000011111122222
Q ss_pred --ccCC---CcchHHHHHHH---HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceee
Q 007982 152 --QEDG---GGEQLERVYER---LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLL 223 (582)
Q Consensus 152 --~~~~---~~~~~~~~~~~---l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlL 223 (582)
+... .....+++... ...........++.++++.+|+.. ..++++.+|||||+|||+|||||+.+|++|||
T Consensus 81 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~la~al~~~p~llll 159 (213)
T cd03262 81 VFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLAD-KADAYPAQLSGGQQQRVAIARALAMNPKVMLF 159 (213)
T ss_pred EecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHh-HhhhCccccCHHHHHHHHHHHHHhcCCCEEEE
Confidence 2111 12233333221 112233445567889999999974 56889999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeE
Q 007982 224 DEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQL 274 (582)
Q Consensus 224 DEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i 274 (582)
||||++||+.++.++.++|+++ +.|||++|||++++..+||++++|++|++
T Consensus 160 DEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 160 DEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999865 57999999999999999999999999874
No 288
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=324.03 Aligned_cols=205 Identities=19% Similarity=0.210 Sum_probs=168.5
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc--------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH-------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~-------- 429 (582)
+.++|+++|++++|++ ..+|+|+||+|.+|++++|+||||||||||+++|+|+.+ |++|+|.+++.
T Consensus 36 ~~~~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 36 GKPHVVAKNFSIYYGE-FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred CceEEEEeeeEEEECC-EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 5678999999999964 579999999999999999999999999999999999864 49999987542
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhc--C---CCC--hHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKE--Y---PGN--EEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRV 494 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~---~~~--~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 494 (582)
..++|++|... +.. .++.+++... . ... ..+.+.++++.+|+.. .....++.+|||||+|||
T Consensus 115 ~~~~~~~i~~v~q~~~--l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv 191 (286)
T PRK14275 115 EVLLRKKIGMVFQKPN--PFP-KSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRL 191 (286)
T ss_pred hHHhhhcEEEECCCCC--CCc-cCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHH
Confidence 24788888753 222 3777776431 1 111 1345677888888742 122456689999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 495 VFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 495 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++. +.|+..++..
T Consensus 192 ~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~-~~g~~~~~~~ 270 (286)
T PRK14275 192 CVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLV-EHAPTAQLFT 270 (286)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 9999999999999999999999999999999999876 458999999999999999999999999996 5788877653
No 289
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-38 Score=312.32 Aligned_cols=188 Identities=24% Similarity=0.311 Sum_probs=157.0
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------------ee
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------------LR 431 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------------~~ 431 (582)
+.+ +|+++|++ +.+ |+||+|.+ ++++|+||||||||||+++|+|+++|++|+|.+.+. ..
T Consensus 2 ~~~-~l~~~~~~-~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 76 (214)
T cd03297 2 LCV-DIEKRLPD-FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRK 76 (214)
T ss_pred cee-eeeEecCC-eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhc
Confidence 445 99999975 444 99999999 999999999999999999999999999999976542 14
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcCC----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEYP----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
++|++|... +....++.+++..... ....+++.++++.+|+.... +.++.+|||||||||+||||++.+|++|
T Consensus 77 i~~~~q~~~--~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~p~ll 153 (214)
T cd03297 77 IGLVFQQYA--LFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLL-NRYPAQLSGGEKQRVALARALAAQPELL 153 (214)
T ss_pred EEEEecCCc--cCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHh-hcCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 788888742 3345677776542211 11234678899999997644 4567899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
||||||+|||+.++..+.+.|+++ +.|||++|||++++..+||++++|++|+++.
T Consensus 154 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 212 (214)
T cd03297 154 LLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQY 212 (214)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 999999999999999999988764 5799999999999999999999999999863
No 290
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-39 Score=316.44 Aligned_cols=197 Identities=29% Similarity=0.415 Sum_probs=153.1
Q ss_pred eEEeeeEEEECC----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHH
Q 007982 73 IRIESLSVTFHG----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEI 148 (582)
Q Consensus 73 i~v~nls~~y~~----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 148 (582)
|+++|+++.|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++..... ....
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i----~~~g~~~~~--~~~~ 74 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEV----LVDGEPVTG--PGPD 74 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE----EECCEECcc--ccCc
Confidence 578999999987 789999999999999999999999999999999999988775543 222211100 0111
Q ss_pred hcc--ccC---CCcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 149 LGA--QED---GGGEQLERVYER--LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 149 ~~~--~~~---~~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
+++ +.. ......+++... ...........++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++|
T Consensus 75 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrl~la~al~~~p~ll 153 (220)
T cd03293 75 RGYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSG-FENAYPHQLSGGMRQRVALARALAVDPDVL 153 (220)
T ss_pred EEEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-hhhCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 221 111 111223333211 112233344567889999999974 567899999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEe--CCeEEE
Q 007982 222 LLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQ--NKQLKF 276 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~--~G~i~~ 276 (582)
||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|+ +|+++.
T Consensus 154 lLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~ 214 (220)
T cd03293 154 LLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVA 214 (220)
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEE
Confidence 999999999999999999998764 5799999999999999999999999 799863
No 291
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=9.2e-39 Score=352.08 Aligned_cols=201 Identities=23% Similarity=0.290 Sum_probs=170.5
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~ 432 (582)
++|+++|++++|++ +.+|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|.+.+. ..+
T Consensus 3 ~~i~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 3 ALLQLKGIDKAFPG-VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred ceEEEeeeEEEeCC-eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 57999999999964 67999999999999999999999999999999999999999999987642 248
Q ss_pred EEechhhhhhcCCcccHHHHHHhcC------CC--C--hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHcc
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEY------PG--N--EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~------~~--~--~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 502 (582)
+|++|.+. +....++.+++.... .. . ..+++.++++.+|+.+.. ++++.+|||||||||+|||||+.
T Consensus 82 ~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~ 158 (501)
T PRK10762 82 GIIHQELN--LIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSS-DKLVGELSIGEQQMVEIAKVLSF 158 (501)
T ss_pred EEEEcchh--ccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCc-cCchhhCCHHHHHHHHHHHHHhc
Confidence 89999753 445678888764321 11 1 134578899999998654 45679999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ .+|+.+++
T Consensus 159 ~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 228 (501)
T PRK10762 159 ESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFI-AEREVADL 228 (501)
T ss_pred CCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEE-EecCcCcC
Confidence 99999999999999999999999888764 579999999999999999999999999996 46666554
No 292
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=320.61 Aligned_cols=201 Identities=29% Similarity=0.364 Sum_probs=168.1
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCC--------CcEEEEcCc--------
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPL--------DGMVRRHNH-------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~--------~G~i~~~~~-------- 429 (582)
+|+++|++++|++ +.+|+++||+|.+|++++|+||||||||||+++|+|+++|+ +|+|.+.+.
T Consensus 1 ml~~~nl~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 1 MLTADHLHVARRH-RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred CeEEEEEEEEECC-EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 4789999999964 67999999999999999999999999999999999999998 999987652
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc-CC---------CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE-YP---------GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|... ..+..++.+++... ++ ....+.+.++++.+|+.... ++++.+|||||+|||+|
T Consensus 80 ~~~~~~~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~l 156 (272)
T PRK13547 80 RLARLRAVLPQAAQ--PAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALV-GRDVTTLSGGELARVQF 156 (272)
T ss_pred HHHhhcEEecccCC--CCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhh-cCCcccCCHHHHHHHHH
Confidence 12577887643 22346777776432 11 01234578899999998654 45678999999999999
Q ss_pred HHHHc---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEE
Q 007982 497 AWLAY---------RQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRW 563 (582)
Q Consensus 497 Aral~---------~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~ 563 (582)
||||+ .+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ .
T Consensus 157 aral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~-~ 235 (272)
T PRK13547 157 ARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIV-A 235 (272)
T ss_pred HHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEE-E
Confidence 99999 599999999999999999999999988764 579999999999999999999999999997 4
Q ss_pred cCCHHHHH
Q 007982 564 EGDIMDFK 571 (582)
Q Consensus 564 ~g~~~~~~ 571 (582)
.|+.+++.
T Consensus 236 ~g~~~~~~ 243 (272)
T PRK13547 236 HGAPADVL 243 (272)
T ss_pred ecCHHHHc
Confidence 78887764
No 293
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.6e-38 Score=352.36 Aligned_cols=207 Identities=21% Similarity=0.337 Sum_probs=170.0
Q ss_pred CCeEEEEEEEEEecC---CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc------
Q 007982 364 PPVLQFVEVTFGYTP---DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH------ 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~---~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~------ 429 (582)
.++|+++|++++|++ .+++|+|+||+|.+||++||+||||||||||+++|+|+++| ++|+|.+.+.
T Consensus 3 ~~~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 82 (529)
T PRK15134 3 QPLLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHAS 82 (529)
T ss_pred CceEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCC
Confidence 468999999999963 24799999999999999999999999999999999999986 7999976541
Q ss_pred ---------eeEEEechhhhhhcCCcccHHHHHHh------cCCCC-hHHHHHHHHHhcCCCCc--cccCCCCCCChhHH
Q 007982 430 ---------LRIAQFHQHLAEKLDMDMSALQYMIK------EYPGN-EEEKMRAAIGRFGLTGK--AQVMPMKNLSDGQR 491 (582)
Q Consensus 430 ---------~~~~~~~q~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~l~~~gl~~~--~~~~~~~~LSgGqk 491 (582)
..++|++|.....+....++.+++.. ..... ..+++.++++.+||.+. ..++++.+||||||
T Consensus 83 ~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~LSgGe~ 162 (529)
T PRK15134 83 EQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGER 162 (529)
T ss_pred HHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhhCCcccCHHHH
Confidence 24899999854323333455444321 11111 23567889999999752 22456799999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCH
Q 007982 492 SRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDI 567 (582)
Q Consensus 492 qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 567 (582)
|||+|||||+.+|+||||||||++||+.++..+.++|+++ +.|||+||||++++..+||||++|++|+++ +.|++
T Consensus 163 qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~-~~g~~ 241 (529)
T PRK15134 163 QRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV-EQNRA 241 (529)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE-EeCCH
Confidence 9999999999999999999999999999999999998763 679999999999999999999999999996 57887
Q ss_pred HHHH
Q 007982 568 MDFK 571 (582)
Q Consensus 568 ~~~~ 571 (582)
.++.
T Consensus 242 ~~~~ 245 (529)
T PRK15134 242 ATLF 245 (529)
T ss_pred HHHh
Confidence 7764
No 294
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6.3e-39 Score=359.06 Aligned_cols=204 Identities=27% Similarity=0.388 Sum_probs=180.8
Q ss_pred CeEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeE
Q 007982 365 PVLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~ 432 (582)
.-++++||+|+|+.+ +++|+|+||+|++||++||+|+||||||||+|+|.|+++|++|+|..++. ..+
T Consensus 470 g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~i 549 (709)
T COG2274 470 GEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQV 549 (709)
T ss_pred ceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhhe
Confidence 359999999999865 46999999999999999999999999999999999999999999998763 358
Q ss_pred EEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHcc
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~ 502 (582)
+|++|+.. -+.-|+.+++....+..+.+++.+++...|+.++....| ...||||||||++|||||++
T Consensus 550 g~V~Q~~~---Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~ 626 (709)
T COG2274 550 GYVLQDPF---LFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLS 626 (709)
T ss_pred eEEcccch---hhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhcc
Confidence 99999853 356789999887777666778888888888766655444 35799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhcC--ceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEWD--GGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
+|+|||||||||+||+++...+.+.|.++. +|+|+|||++..+ +.||||+||++|+|++ +|+.+++.+.
T Consensus 627 ~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti-~~adrIiVl~~Gkiv~-~gs~~ell~~ 697 (709)
T COG2274 627 KPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTI-RSADRIIVLDQGKIVE-QGSHEELLAQ 697 (709)
T ss_pred CCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHh-hhccEEEEccCCceec-cCCHHHHHHh
Confidence 999999999999999999999999999985 8999999999999 5799999999999985 9999998875
No 295
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.6e-38 Score=310.65 Aligned_cols=197 Identities=27% Similarity=0.379 Sum_probs=153.0
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhcc
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILGA 151 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~ 151 (582)
|+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++.... .......+++
T Consensus 1 l~~~~l~~~~~~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i----~~~g~~~~~~~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGKKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEI----TFDGKSYQKNIEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECCeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEE----EECCCcccchHHHHhhEEE
Confidence 578999999998899999999999999999999999999999999999988875543 22222110 0111122222
Q ss_pred --ccCC---CcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCC
Q 007982 152 --QEDG---GGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEP 226 (582)
Q Consensus 152 --~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEP 226 (582)
+... .....+++........ ..+.++.++++.+++.. ..++++.+|||||||||+|||||+.+|++||||||
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP 153 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLG--IRKKRIDEVLDVVGLKD-SAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEP 153 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcC--CcHHHHHHHHHHcCCHH-HHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCC
Confidence 2111 1122333322111111 12456888999999964 56789999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 227 TNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 227 t~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
|++||+.++..+.++|+++ +.|+|++|||++++..+||++++|++|+++.
T Consensus 154 t~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~ 206 (208)
T cd03268 154 TNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIE 206 (208)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe
Confidence 9999999999999998764 6799999999999999999999999999863
No 296
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.5e-38 Score=315.98 Aligned_cols=206 Identities=25% Similarity=0.336 Sum_probs=158.2
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHH-HHH
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKE-AEI 148 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~-~~~ 148 (582)
|+++||++.|+++.+|+++||+|.+|++++|+||||||||||+++|+|+.+|+.|.+. +++... ..... ...
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~~~~~~~~~~~~~~ 76 (232)
T cd03218 1 LRAENLSKRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKIL----LDGQDITKLPMHKRARLG 76 (232)
T ss_pred CeEEEEEEEeCCEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE----ECCEecccCCHhHHHhcc
Confidence 5789999999998999999999999999999999999999999999999988766432 221110 00011 111
Q ss_pred hcc--ccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 149 LGA--QEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
+++ +... .....+++.... ..........++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++|
T Consensus 77 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrl~la~al~~~p~ll 155 (232)
T cd03218 77 IGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITH-LRKSKASSLSGGERRRVEIARALATNPKFL 155 (232)
T ss_pred EEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 221 2111 112233332211 11223344567889999999974 568899999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 222 LLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
||||||++||+.++..+.++|+++ +.|||++|||++++..+||++++|++|+++ +.|+.+++
T Consensus 156 llDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 220 (232)
T cd03218 156 LLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVL-AEGTPEEI 220 (232)
T ss_pred EecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EEeCHHHh
Confidence 999999999999999999988764 579999999999999999999999999996 45666554
No 297
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-38 Score=319.18 Aligned_cols=205 Identities=19% Similarity=0.220 Sum_probs=169.1
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc--------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH-------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~-------- 429 (582)
+.++|+++|++++|+ ++++|+|+||+|.+||+++|+||||||||||+++|+|+++ |++|+|...+.
T Consensus 17 ~~~~l~~~nl~~~~~-~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 17 EEIALSTKDLHVYYG-KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred CCeEEEEeeEEEEEC-CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 456899999999996 4679999999999999999999999999999999999996 58999976542
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhcC---CC--C--hHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKEY---PG--N--EEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRV 494 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~~---~~--~--~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv 494 (582)
..++|++|... + +..++.+++.... .. . ...++.++++.+++.. .....++.+|||||+|||
T Consensus 96 ~~~~~~~i~~v~q~~~--~-~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl 172 (267)
T PRK14237 96 VYEMRKHIGMVFQRPN--P-FAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRL 172 (267)
T ss_pred hHHHhcceEEEecCCc--c-ccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHH
Confidence 24788888743 2 2247777764321 11 1 1345677899999853 123456789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 495 VFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 495 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+||||++.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|+++. .|++.++..
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 251 (267)
T PRK14237 173 CIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIE-YDKTRNIFT 251 (267)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEE-eCCHHHHhc
Confidence 9999999999999999999999999999999998876 4689999999999999999999999999974 788887743
No 298
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-38 Score=311.71 Aligned_cols=198 Identities=28% Similarity=0.457 Sum_probs=155.0
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-H-HHHHHHhc
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-L-EKEAEILG 150 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~-~~~~~~~~ 150 (582)
|+++|+++.|+++.+|+|+||+|++| +++|+||||||||||+++|+|+.+++.|.+ .+++.... . ......++
T Consensus 1 i~~~~~~~~~~~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i----~~~g~~~~~~~~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGKKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTI----RIDGQDVLKQPQKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECCEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEE----EECCCccccchHHHHhheE
Confidence 57899999999889999999999999 999999999999999999999988876543 22221110 0 11112222
Q ss_pred c--ccCC---CcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceee
Q 007982 151 A--QEDG---GGEQLERVYER--LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLL 223 (582)
Q Consensus 151 ~--~~~~---~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlL 223 (582)
+ +... .....+++... +........+.++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++|||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~la~al~~~p~llll 154 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGD-RAKKKIGSLSGGMRRRVGIAQALVGDPSILIV 154 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHH-HHhCchhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 2 2211 11223333221 222333444567889999999974 46789999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 224 DEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 224 DEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
||||++||+.++.++.++|+++ +.|+|+||||++++..+||++++|++|+++.
T Consensus 155 DEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~ 209 (211)
T cd03264 155 DEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVF 209 (211)
T ss_pred cCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999876 5799999999999999999999999999863
No 299
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=328.74 Aligned_cols=209 Identities=22% Similarity=0.305 Sum_probs=161.4
Q ss_pred ceEEeeeEEEECC----------eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-
Q 007982 72 DIRIESLSVTFHG----------HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL- 140 (582)
Q Consensus 72 ~i~v~nls~~y~~----------~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~- 140 (582)
+|+++||++.|+. ..+|+||||+|++||++||+|+||||||||+++|+|+.+++.|.+. +++..+
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~----~~g~~l~ 80 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELY----YQGQDLL 80 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEE----ECCEEcC
Confidence 7999999999962 5799999999999999999999999999999999999888755432 221111
Q ss_pred -----HHHHHHHHhc--cccCC-----CcchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHH
Q 007982 141 -----KLEKEAEILG--AQEDG-----GGEQLERVYERLE---ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWR 205 (582)
Q Consensus 141 -----~~~~~~~~~~--~~~~~-----~~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqr 205 (582)
........++ +|.+. .......+.+.+. .+.......++.++|+.+||.....++++++||||||
T Consensus 81 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p~~LSgGq~ 160 (327)
T PRK11308 81 KADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRYPHMFSGGQR 160 (327)
T ss_pred cCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCCCccCCHHHH
Confidence 1111111222 22211 0112222222221 2344455678999999999975567899999999999
Q ss_pred HHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCCh
Q 007982 206 MRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNF 281 (582)
Q Consensus 206 qRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 281 (582)
|||+|||||+.+|++||+||||++||+.++.+++++|.++ +.|+|+||||++++..+||+|++|.+|+++. .|+.
T Consensus 161 QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive-~g~~ 239 (327)
T PRK11308 161 QRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVE-KGTK 239 (327)
T ss_pred HHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCH
Confidence 9999999999999999999999999999999999988654 6799999999999999999999999999975 5666
Q ss_pred hHHH
Q 007982 282 DQYV 285 (582)
Q Consensus 282 ~~~~ 285 (582)
+++.
T Consensus 240 ~~~~ 243 (327)
T PRK11308 240 EQIF 243 (327)
T ss_pred HHHh
Confidence 5554
No 300
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.8e-38 Score=312.79 Aligned_cols=204 Identities=27% Similarity=0.388 Sum_probs=157.3
Q ss_pred eEEeeeEEEECC--eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH--HHHHHHH
Q 007982 73 IRIESLSVTFHG--HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK--LEKEAEI 148 (582)
Q Consensus 73 i~v~nls~~y~~--~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~ 148 (582)
|+++||++.|++ +++|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++.... .......
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~----~~g~~~~~~~~~~~~~ 76 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAY----INGYSIRTDRKAARQS 76 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE----ECCEecccchHHHhhh
Confidence 578999999987 7899999999999999999999999999999999999888766432 2211110 0111122
Q ss_pred hcc--ccCC---CcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 149 LGA--QEDG---GGEQLERVYER--LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
+++ +... .....+++... ....+......++.++++.+++.+ ..++++.+|||||||||+|||||+.+|++|
T Consensus 77 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~la~al~~~p~ll 155 (220)
T cd03263 77 LGYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTD-KANKRARTLSGGMKRKLSLAIALIGGPSVL 155 (220)
T ss_pred EEEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHH-HHhChhhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 222 2111 11223333211 112233344567889999999964 567899999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChh
Q 007982 222 LLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFD 282 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~ 282 (582)
||||||++||+.++..+.+.|+++ +.|||++|||++++..+||++++|++|+++. .|+.+
T Consensus 156 llDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~~ 217 (220)
T cd03263 156 LLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRC-IGSPQ 217 (220)
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEe-cCCHH
Confidence 999999999999999999999876 3699999999999999999999999999974 45543
No 301
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-38 Score=316.87 Aligned_cols=207 Identities=24% Similarity=0.397 Sum_probs=160.9
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---------HH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---------KL 142 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---------~~ 142 (582)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++... ..
T Consensus 2 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i----~~~g~~~~~~~~~~~~~~ 77 (242)
T PRK11124 2 SIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTL----NIAGNHFDFSKTPSDKAI 77 (242)
T ss_pred EEEEEeeEEEECCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE----EECCEecccccccchhhH
Confidence 5899999999998899999999999999999999999999999999999998876543 2222111 01
Q ss_pred HHHHHHhcc--ccCC---CcchHHHHHH-H--HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHH
Q 007982 143 EKEAEILGA--QEDG---GGEQLERVYE-R--LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARAL 214 (582)
Q Consensus 143 ~~~~~~~~~--~~~~---~~~~~~~~~~-~--l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 214 (582)
......+++ +... .....+++.. . ...........++.++++.+|+.. ..++++.+|||||||||+|||||
T Consensus 78 ~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G~~qrv~laral 156 (242)
T PRK11124 78 RELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKP-YADRFPLHLSGGQQQRVAIARAL 156 (242)
T ss_pred HHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCHHHHHHHHHHHHH
Confidence 111122322 2111 1123333321 1 111223344567889999999964 56889999999999999999999
Q ss_pred hcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 215 FINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 215 ~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
+.+|++|||||||++||+.++.++.++|+++ +.|+|++|||++++..+||++++|++|+++ +.|+++++
T Consensus 157 ~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~ 228 (242)
T PRK11124 157 MMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIV-EQGDASCF 228 (242)
T ss_pred hcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHh
Confidence 9999999999999999999999999998764 679999999999999999999999999997 45776654
No 302
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=2e-38 Score=298.75 Aligned_cols=164 Identities=23% Similarity=0.329 Sum_probs=144.5
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCc
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMD 446 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~ 446 (582)
|+++|+++.|++++++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|...+...++|++|... + +.
T Consensus 1 i~~~~~~~~~~~~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~--~-~~ 77 (166)
T cd03223 1 IELENLSLATPDGRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPY--L-PL 77 (166)
T ss_pred CEEEEEEEEcCCCCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCc--c-cc
Confidence 46899999996446799999999999999999999999999999999999999999999887677999999753 2 23
Q ss_pred ccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHH
Q 007982 447 MSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAE 526 (582)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~ 526 (582)
.++.+++... ++.+|||||||||+||||++.+|++|||||||++||+.++..+.+
T Consensus 78 ~tv~~nl~~~-------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~~~~~~l~~ 132 (166)
T cd03223 78 GTLREQLIYP-------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDEESEDRLYQ 132 (166)
T ss_pred ccHHHHhhcc-------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCHHHHHHHHH
Confidence 4565554310 246899999999999999999999999999999999999999999
Q ss_pred HHHhcCceEEEEecCHHHHHhhcCEEEEEeCCe
Q 007982 527 ALNEWDGGLVLVSHDFRLINQVAHEIWVCENQA 559 (582)
Q Consensus 527 ~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~ 559 (582)
.|.+++.|+|+||||.+++ .+||++++|+++.
T Consensus 133 ~l~~~~~tiiivsh~~~~~-~~~d~i~~l~~~~ 164 (166)
T cd03223 133 LLKELGITVISVGHRPSLW-KFHDRVLDLDGEG 164 (166)
T ss_pred HHHHhCCEEEEEeCChhHH-hhCCEEEEEcCCC
Confidence 9999988999999999876 6999999998764
No 303
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-39 Score=321.87 Aligned_cols=199 Identities=26% Similarity=0.351 Sum_probs=155.2
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILG 150 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 150 (582)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++.... ..... .+.
T Consensus 1 ml~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~~~~~~~~~-~~v 75 (255)
T PRK11248 1 MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSIT----LDGKPVEGPGAER-GVV 75 (255)
T ss_pred CEEEEEEEEEeCCeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE----ECCEECCCCCCcE-EEE
Confidence 47899999999988999999999999999999999999999999999999988766432 2211110 00000 011
Q ss_pred cccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecC
Q 007982 151 AQEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDE 225 (582)
Q Consensus 151 ~~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDE 225 (582)
++... .....+++.... ..........++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++|||||
T Consensus 76 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgGq~qrl~laral~~~p~lllLDE 154 (255)
T PRK11248 76 FQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEG-AEKRYIWQLSGGQRQRVGIARALAANPQLLLLDE 154 (255)
T ss_pred eCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChh-HhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 12111 122333332211 12333444567899999999974 5678999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEe--CCeEEE
Q 007982 226 PTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQ--NKQLKF 276 (582)
Q Consensus 226 Pt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~--~G~i~~ 276 (582)
||++||+.++.++.++|+++ +.|||+||||++++..+||++++|+ +|+++.
T Consensus 155 Pt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~ 211 (255)
T PRK11248 155 PFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVE 211 (255)
T ss_pred CCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEE
Confidence 99999999999999998765 5799999999999999999999998 599864
No 304
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-38 Score=316.43 Aligned_cols=203 Identities=21% Similarity=0.264 Sum_probs=167.7
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc----------
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH---------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~---------- 429 (582)
++|+++|+++.|++ +++|+++||+|.+|++++|+||||||||||+++|+|+++| ++|+|...+.
T Consensus 2 ~~l~~~~l~~~~~~-~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 2 PIIEIENFSAYYGE-KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred ceEEEEeeEEEeCC-ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 47899999999964 6799999999999999999999999999999999999984 8999986541
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc--C-CC-C---hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE--Y-PG-N---EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~--~-~~-~---~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|... +. ..++.+++... . .. . ..+.+.++++.+|+... ..+.++.+|||||+|||+|
T Consensus 81 ~~~~~i~~~~q~~~--~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~l 157 (250)
T PRK14262 81 EYRKKVGMVFQKPT--PF-PMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLCI 157 (250)
T ss_pred HhhhhEEEEecCCc--cC-cccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHH
Confidence 24788888753 22 35777766421 1 11 1 22346778889998532 2345678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ ..|+.+++.+
T Consensus 158 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 234 (250)
T PRK14262 158 ARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELI-EYGPTREIVE 234 (250)
T ss_pred HHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEE-EecCHHHHHh
Confidence 99999999999999999999999999999999876 469999999999999999999999999997 5788887754
No 305
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.4e-38 Score=315.21 Aligned_cols=201 Identities=27% Similarity=0.384 Sum_probs=152.0
Q ss_pred ceEEeeeEEEECCe----eeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---H---
Q 007982 72 DIRIESLSVTFHGH----DLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---K--- 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~----~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~--- 141 (582)
+|+++||+++|+++ .+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... .
T Consensus 1 ~l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~----~~g~~~~~~~~~~ 76 (228)
T cd03257 1 LLEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSII----FDGKDLLKLSRRL 76 (228)
T ss_pred CeEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE----ECCEEccccchhh
Confidence 47899999999865 799999999999999999999999999999999999988766432 211111 0
Q ss_pred HHHHHHHhcc--ccC-----CCcchHHHHHHHHHcC--Ch-hHHHHH-HHHHHHhCCCChhhhhccCCCCChhHHHHHHH
Q 007982 142 LEKEAEILGA--QED-----GGGEQLERVYERLEAL--DA-STAEKR-AAEILYGLGFNKTMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 142 ~~~~~~~~~~--~~~-----~~~~~~~~~~~~l~~~--~~-~~~~~~-~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~L 210 (582)
.......+++ +.. ......+++...+... .. ...... +.++++.+++.....++++.+|||||||||+|
T Consensus 77 ~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~l 156 (228)
T cd03257 77 RKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRYPHELSGGQRQRVAI 156 (228)
T ss_pred HHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCCchhcCHHHHHHHHH
Confidence 0111112221 221 1122333332222111 11 112222 35889999995445688999999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||++|||++++..+||++++|++|+++.
T Consensus 157 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 226 (228)
T cd03257 157 ARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVE 226 (228)
T ss_pred HHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEe
Confidence 99999999999999999999999999999998764 5799999999999999999999999999863
No 306
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-38 Score=319.50 Aligned_cols=205 Identities=20% Similarity=0.234 Sum_probs=167.7
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc--------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH-------- 429 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~-------- 429 (582)
++++|+++|+++.|++ +.+|+++||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+.+.
T Consensus 17 ~~~~l~~~nl~~~~~~-~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 17 DHSVFEVEGVKVFYGG-FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred CCceEEEeeEEEEeCC-eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 4569999999999964 5799999999999999999999999999999999999863 6899976541
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhc-----CCCChHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKE-----YPGNEEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|+.. +. ..++.+++... +.....+.+.++++.+++.. .....++.+|||||+|||+|
T Consensus 96 ~~~~~~~i~~v~q~~~--l~-~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~L 172 (274)
T PRK14265 96 SVKLRRQVGMVFQRPN--PF-PKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLCI 172 (274)
T ss_pred hHHHhhcEEEEccCCc--cc-cccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHHH
Confidence 24788888753 22 23667666431 11112344667788888742 12345678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEe---------CCeEEEEcC
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCE---------NQAVTRWEG 565 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~---------~G~i~~~~g 565 (582)
||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++.++||++++|+ +|+++ ..|
T Consensus 173 AraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~-~~g 251 (274)
T PRK14265 173 ARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV-EFS 251 (274)
T ss_pred HHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE-EeC
Confidence 99999999999999999999999999999999876 4789999999999999999999997 79997 578
Q ss_pred CHHHHHH
Q 007982 566 DIMDFKL 572 (582)
Q Consensus 566 ~~~~~~~ 572 (582)
+..++..
T Consensus 252 ~~~~~~~ 258 (274)
T PRK14265 252 PTEQMFG 258 (274)
T ss_pred CHHHHHh
Confidence 9888753
No 307
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=335.34 Aligned_cols=209 Identities=25% Similarity=0.357 Sum_probs=164.9
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-HHHHHHHHh
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-KLEKEAEIL 149 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~ 149 (582)
.+|+++|++++|++..+|+++||+|++|++++|+|||||||||||++|+|+.+++.|.+. +++... ........+
T Consensus 18 ~~l~l~~v~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~----i~g~~i~~~~~~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIM----LDGVDLSHVPPYQRPI 93 (377)
T ss_pred ceEEEEeEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEE----ECCEECCCCCHHHCCE
Confidence 379999999999988999999999999999999999999999999999999998866432 222111 000111122
Q ss_pred c--cccCC---CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 150 G--AQEDG---GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 150 ~--~~~~~---~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
+ +|... .....+++...+. ..+..+.+.++.++++.+++.+ +.++++.+|||||||||+|||||+.+|++||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~~~~LSgGq~QRVaLARAL~~~P~lLL 172 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQE-FAKRKPHQLSGGQRQRVALARSLAKRPKLLL 172 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-hhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 2 22221 2234455543332 2345566778999999999975 5789999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHh----hcCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 223 LDEPTNHLDLEACVWLEETLK----KFDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~----~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||||++||+..+.++.+.|+ +.+.|+|+||||++++..+||+|++|++|+++. .|+++++.
T Consensus 173 LDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~-~g~~~~~~ 238 (377)
T PRK11607 173 LDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQ-IGEPEEIY 238 (377)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEE-EcCHHHHH
Confidence 999999999999998876654 357899999999999999999999999999975 56766554
No 308
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.7e-38 Score=332.61 Aligned_cols=195 Identities=22% Similarity=0.262 Sum_probs=164.2
Q ss_pred EEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------------eeEEEe
Q 007982 371 EVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------------LRIAQF 435 (582)
Q Consensus 371 ~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------------~~~~~~ 435 (582)
|++++|++ .. + ++||+|.+|++++|+|||||||||||++|+|+++|++|+|...+. ..++|+
T Consensus 4 ~l~~~~~~-~~-~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v 80 (354)
T TIGR02142 4 RFSKRLGD-FS-L-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYV 80 (354)
T ss_pred EEEEEECC-EE-E-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEEE
Confidence 89999964 44 4 999999999999999999999999999999999999999976541 247888
Q ss_pred chhhhhhcCCcccHHHHHHhcCC---C-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 436 HQHLAEKLDMDMSALQYMIKEYP---G-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
+|... +....|+.+++..... . ...+++.++++.+||..... +++.+|||||||||+|||||+.+|++|||||
T Consensus 81 ~q~~~--l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-~~~~~LSgGqkqRvalAraL~~~p~lllLDE 157 (354)
T TIGR02142 81 FQEAR--LFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLG-RLPGRLSGGEKQRVAIGRALLSSPRLLLMDE 157 (354)
T ss_pred ecCCc--cCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhc-CChhhCCHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 88753 4445688887653211 1 12345789999999986554 5668999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 512 PTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|++. ..|+++++..
T Consensus 158 Pts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 221 (354)
T TIGR02142 158 PLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVA-AAGPIAEVWA 221 (354)
T ss_pred CCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEE-EECCHHHHhc
Confidence 99999999999999988764 578999999999999999999999999997 5788887754
No 309
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-38 Score=313.71 Aligned_cols=200 Identities=26% Similarity=0.360 Sum_probs=160.6
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEEe
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQF 435 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~~ 435 (582)
|+++|++++|++++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|+
T Consensus 1 l~~~~l~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 80 (236)
T cd03253 1 IEFENVTFAYDPGRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVV 80 (236)
T ss_pred CEEEEEEEEeCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEE
Confidence 468999999964457999999999999999999999999999999999999999999987652 237888
Q ss_pred chhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCC-----------CCccccCCCCCCChhHHHHHHHHHHHccCC
Q 007982 436 HQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGL-----------TGKAQVMPMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~~LSgGqkqrv~lAral~~~p 504 (582)
+|... + +..|+.+++...........+...+..+++ .... ..++.+|||||||||+|||||+.+|
T Consensus 81 ~q~~~--~-~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~-~~~~~~LS~G~~~rl~la~aL~~~p 156 (236)
T cd03253 81 PQDTV--L-FNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIV-GERGLKLSGGEKQRVAIARAILKNP 156 (236)
T ss_pred CCCCh--h-hcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchh-hcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 88753 2 235777776543222222223333433333 3222 2346799999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++|||||||+|||+.++..+.+.|.++ +.|||+|||+.+++.. ||++++|++|++. +.|+.+++..
T Consensus 157 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~-~d~~~~l~~g~i~-~~~~~~~~~~ 224 (236)
T cd03253 157 PILLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVN-ADKIIVLKDGRIV-ERGTHEELLA 224 (236)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHh-CCEEEEEECCEEE-eeCCHHHHhh
Confidence 999999999999999999999998765 5699999999999965 9999999999996 5788877754
No 310
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.5e-38 Score=314.60 Aligned_cols=201 Identities=28% Similarity=0.364 Sum_probs=159.9
Q ss_pred EEEEEEEEEecC--CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 367 LQFVEVTFGYTP--DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 367 l~~~~l~~~y~~--~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
|+++|+++.|++ +.++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 468999999964 246999999999999999999999999999999999999999999987652 2478
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhc-----------CCCCccccCCCCCCChhHHHHHHHHHHHcc
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRF-----------GLTGKAQVMPMKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~~LSgGqkqrv~lAral~~ 502 (582)
|++|... +. ..++.+++...........+...++.+ ++.... ..++.+|||||+|||+|||+|+.
T Consensus 81 ~~~q~~~--~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~LS~G~~qrv~la~al~~ 156 (238)
T cd03249 81 LVSQEPV--LF-DGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLV-GERGSQLSGGQKQRIAIARALLR 156 (238)
T ss_pred EECCchh--hh-hhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceee-ccCCccCCHHHHHHHHHHHHHhc
Confidence 8888753 22 247777764322111122233333333 333223 34558999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
+|++|||||||+|||+.++..+.+.|.++ +.|||++|||++++. +||++++|++|+++ +.|+.+++...
T Consensus 157 ~p~llllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~-~~d~v~~l~~G~i~-~~~~~~~~~~~ 227 (238)
T cd03249 157 NPKILLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIR-NADLIAVLQNGQVV-EQGTHDELMAQ 227 (238)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHh-hCCEEEEEECCEEE-EeCCHHHHhhc
Confidence 99999999999999999999999999875 468999999999997 89999999999996 57888777553
No 311
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=323.01 Aligned_cols=209 Identities=24% Similarity=0.370 Sum_probs=162.9
Q ss_pred ceEEeeeEEEEC-CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-----HHHHH
Q 007982 72 DIRIESLSVTFH-GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-----KLEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~-~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-----~~~~~ 145 (582)
+|+++|++++|+ ++.+|+++||+|++||+++|+||||||||||+++|+|+.+++.|.+. +++... .....
T Consensus 5 ~l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~----i~g~~~~~~~~~~~~~ 80 (283)
T PRK13636 5 ILKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRIL----FDGKPIDYSRKGLMKL 80 (283)
T ss_pred eEEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEE----ECCEECCCCcchHHHH
Confidence 799999999996 57899999999999999999999999999999999999988766432 222111 11111
Q ss_pred HHHhcc--ccCC----CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 146 AEILGA--QEDG----GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 146 ~~~~~~--~~~~----~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
...+++ +... .....+++..... .++......++.++++.+|+.. ..++++.+||||||||++|||||+.+
T Consensus 81 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~LS~G~~qrl~laraL~~~ 159 (283)
T PRK13636 81 RESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEH-LKDKPTHCLSFGQKKRVAIAGVLVME 159 (283)
T ss_pred HhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-hhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 222332 2211 1122333322111 2334445567899999999974 57899999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
|++|||||||++||+.++..+.++|+++ +.|||++|||++++..+|||+++|++|+++ +.|+++++..
T Consensus 160 p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~-~~g~~~~~~~ 231 (283)
T PRK13636 160 PKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVI-LQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999999988754 679999999999999999999999999996 5677776653
No 312
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=318.80 Aligned_cols=209 Identities=23% Similarity=0.341 Sum_probs=158.0
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA-----SDMSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~-----~~~~~~~~~i~~~~~~~-----~ 141 (582)
.|+++||+++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.. ++.|. +.+++... .
T Consensus 6 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~----i~~~g~~i~~~~~~ 81 (253)
T PRK14242 6 KMEARGLSFFYGDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGE----ILLDGENIYDPHVD 81 (253)
T ss_pred EEEEeeeEEEECCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceE----EEECCEEccccccC
Confidence 6999999999998889999999999999999999999999999999999853 23332 22222111 0
Q ss_pred HHHHHHHhcc--ccCC--CcchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDG--GGEQLERVYERLE--AL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~--~~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LA 211 (582)
.......+++ +... .....+++..... .. .....+.++.++++.+|+.. ...++++.+|||||||||+||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~la 161 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLHESALGLSGGQQQRLCIA 161 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHHH
Confidence 1111122322 2111 1123333322221 11 22334567888999999842 245788999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 162 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 236 (253)
T PRK14242 162 RALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIE-VGPTEQIF 236 (253)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999876 4699999999999999999999999999974 56666543
No 313
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.8e-38 Score=316.10 Aligned_cols=209 Identities=22% Similarity=0.334 Sum_probs=160.1
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCC-----CCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASD-----MSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~-----~~~~~~~i~~~~~~~-----~ 141 (582)
+|+++||+++|++..+|+|+||+|++||+++|+|+||||||||+++|+|+.+|+ .|.+ .+++... .
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i----~~~g~~~~~~~~~ 76 (247)
T TIGR00972 1 AIEIENLNLFYGEKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKV----LFDGQDIYDKKID 76 (247)
T ss_pred CEEEEEEEEEECCeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEE----EECCEEccccccc
Confidence 478999999999889999999999999999999999999999999999998775 4432 2222111 0
Q ss_pred HHHHHHHhcc--ccCCC--cchHHHHHHHHH--c-CChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDGG--GEQLERVYERLE--A-LDASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~~--~~~~~~~~~~l~--~-~~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LA 211 (582)
.......+++ +.... ....+++..... . ........++.++++.+|+.. ...++++.+|||||||||+||
T Consensus 77 ~~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~la 156 (247)
T TIGR00972 77 VVELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCIA 156 (247)
T ss_pred hHHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHHH
Confidence 1111122322 21111 223333322211 1 123444567889999999961 346789999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||+.+|++|||||||++||+.++..+.++|+++ +.|+|+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 157 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 231 (247)
T TIGR00972 157 RALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVE-YGPTEQIF 231 (247)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999875 3799999999999999999999999999974 56666553
No 314
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-38 Score=316.45 Aligned_cols=203 Identities=21% Similarity=0.293 Sum_probs=165.7
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCC-----CcEEEEcCc-----------
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPL-----DGMVRRHNH----------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~-----~G~i~~~~~----------- 429 (582)
+|+++|++++|+ ++++|+|+||+|.+|++++|+||||||||||+++|+|+++|+ +|+|.+.+.
T Consensus 4 ~l~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 82 (252)
T PRK14272 4 LLSAQDVNIYYG-DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVA 82 (252)
T ss_pred EEEEeeeEEEEC-CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHH
Confidence 689999999996 467999999999999999999999999999999999999874 899976541
Q ss_pred --eeEEEechhhhhhcCCcccHHHHHHhc--CC---CCh--HHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHHHH
Q 007982 430 --LRIAQFHQHLAEKLDMDMSALQYMIKE--YP---GNE--EEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 430 --~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~---~~~--~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~lA 497 (582)
..++|++|... +....++.+++... .. ... .+.+.++++.+++.. ...+.++.+|||||+|||+||
T Consensus 83 ~~~~i~~~~q~~~--~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la 160 (252)
T PRK14272 83 MRRRVGMVFQKPN--PFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCIA 160 (252)
T ss_pred hhceeEEEeccCc--cCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHHH
Confidence 14788888753 33445777766421 11 111 233555667776532 122456789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|+|+.+|+||||||||++||+.++..+.+.|+++ +.|||++|||++++..+||+|++|++|+++ ..|+++++..
T Consensus 161 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 236 (252)
T PRK14272 161 RALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLV-EHGPTDQLFT 236 (252)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 9999999999999999999999999999999876 479999999999999999999999999997 4788887754
No 315
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.3e-38 Score=321.25 Aligned_cols=209 Identities=19% Similarity=0.275 Sum_probs=159.2
Q ss_pred ceEEeeeEEEECC---------eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH--
Q 007982 72 DIRIESLSVTFHG---------HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-- 140 (582)
Q Consensus 72 ~i~v~nls~~y~~---------~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-- 140 (582)
+|+++||+++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++...
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~~~~ 79 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELL----IDDHPLHF 79 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEE----ECCEECCC
Confidence 6999999999962 4799999999999999999999999999999999999988766532 221111
Q ss_pred -HHHHHHHHhccccCCC-------cchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHH
Q 007982 141 -KLEKEAEILGAQEDGG-------GEQLERVYERLE---ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIA 209 (582)
Q Consensus 141 -~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~ 209 (582)
........+++.++.. ....+.+...+. .+......+.+.++++.+|+.....++++.+|||||||||+
T Consensus 80 ~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~ 159 (267)
T PRK15112 80 GDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYYPHMLAPGQKQRLG 159 (267)
T ss_pred CchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcCchhcCHHHHHHHH
Confidence 0111111222211111 111112211111 12333445678899999999544567889999999999999
Q ss_pred HHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 210 LARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 210 LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||||+.+|+||||||||++||+.++..+.+.|.++ +.|||+|||+++++..+||++++|++|+++ ..|+++++.
T Consensus 160 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 238 (267)
T PRK15112 160 LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVV-ERGSTADVL 238 (267)
T ss_pred HHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-ecCCHHHHh
Confidence 999999999999999999999999999999998764 679999999999999999999999999996 467766654
No 316
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.7e-38 Score=318.22 Aligned_cols=209 Identities=22% Similarity=0.315 Sum_probs=160.7
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHH-----H------
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEER-----L------ 140 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~-----~------ 140 (582)
+|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+|+.|.+ .+++.. .
T Consensus 6 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i----~~~g~~~~~~~i~~~~~~ 81 (258)
T PRK11701 6 LLSVRGLTKLYGPRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEV----HYRMRDGQLRDLYALSEA 81 (258)
T ss_pred eEEEeeeEEEcCCceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEE----EECCccccccccccCCHH
Confidence 6999999999998899999999999999999999999999999999999998876643 222211 1
Q ss_pred HHHH-HHHHhcc--ccCC-----CcchHHHHHHHHHc---CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHH
Q 007982 141 KLEK-EAEILGA--QEDG-----GGEQLERVYERLEA---LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIA 209 (582)
Q Consensus 141 ~~~~-~~~~~~~--~~~~-----~~~~~~~~~~~l~~---~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~ 209 (582)
.... ....+++ +... .....+++...+.. .+....+.++.++++.+++.....++++.+|||||||||+
T Consensus 82 ~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Gq~qrl~ 161 (258)
T PRK11701 82 ERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDLPTTFSGGMQQRLQ 161 (258)
T ss_pred HHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCCCccCCHHHHHHHH
Confidence 0001 0111221 2211 01222233222211 1223445678899999999644567899999999999999
Q ss_pred HHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 210 LARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 210 LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||+||||++++..+||++++|++|+++ +.|+++++.
T Consensus 162 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~ 240 (258)
T PRK11701 162 IARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVV-ESGLTDQVL 240 (258)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHh
Confidence 999999999999999999999999999999988653 679999999999999999999999999997 456666543
No 317
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-38 Score=315.76 Aligned_cols=207 Identities=25% Similarity=0.364 Sum_probs=159.2
Q ss_pred eEEeeeEEEECC-eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHHH
Q 007982 73 IRIESLSVTFHG-HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAEI 148 (582)
Q Consensus 73 i~v~nls~~y~~-~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 148 (582)
|+++|++++|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ........
T Consensus 1 l~~~~l~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~----~~g~~~~~~~~~~~~~~ 76 (242)
T cd03295 1 IEFENVTKRYGGGKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIF----IDGEDIREQDPVELRRK 76 (242)
T ss_pred CEEEEEEEEeCCcceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE----ECCeEcCcCChHHhhcc
Confidence 468999999988 7899999999999999999999999999999999999988766432 221110 00111112
Q ss_pred hcc--ccCC---CcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCCh-hhhhccCCCCChhHHHHHHHHHHHhcCCCc
Q 007982 149 LGA--QEDG---GGEQLERVYER--LEALDASTAEKRAAEILYGLGFNK-TMQAKKTRDFSGGWRMRIALARALFINPTI 220 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~~-~~~~~~~~~LSGGqrqRv~LAraL~~~P~l 220 (582)
+++ +... .....+++... +...+......++.++++.+|+.. ...++++.+|||||||||+|||||+.+|++
T Consensus 77 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~l 156 (242)
T cd03295 77 IGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPL 156 (242)
T ss_pred eEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 222 2111 12233333221 112233445567889999999974 356889999999999999999999999999
Q ss_pred eeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 221 LLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 221 LlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||||||++||+.++.++.+.|+++ +.|||++||+++++..+||+|++|++|+++. .|+.+++
T Consensus 157 lllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 223 (242)
T cd03295 157 LLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQ-VGTPDEI 223 (242)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-ecCHHHH
Confidence 9999999999999999999998764 6799999999999999999999999999974 4665544
No 318
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=5.2e-38 Score=316.05 Aligned_cols=201 Identities=24% Similarity=0.362 Sum_probs=161.2
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCC--CCCCCcEEEEcCce-----------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGD--LVPLDGMVRRHNHL----------- 430 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl--~~p~~G~i~~~~~~----------- 430 (582)
+++|+++|+++.|++ +.+|+|+||+|.+|+++||+|+||||||||+++|+|+ ++|++|+|.+.+..
T Consensus 5 ~~~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (252)
T CHL00131 5 KPILEIKNLHASVNE-NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAH 83 (252)
T ss_pred CceEEEEeEEEEeCC-EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhe
Confidence 458999999999964 5799999999999999999999999999999999998 57999999875421
Q ss_pred -eEEEechhhhhhcCCcccHHHHHHhcC---------CCC----hHHHHHHHHHhcCCCCccccCCCC-CCChhHHHHHH
Q 007982 431 -RIAQFHQHLAEKLDMDMSALQYMIKEY---------PGN----EEEKMRAAIGRFGLTGKAQVMPMK-NLSDGQRSRVV 495 (582)
Q Consensus 431 -~~~~~~q~~~~~~~~~~~~~~~~~~~~---------~~~----~~~~~~~~l~~~gl~~~~~~~~~~-~LSgGqkqrv~ 495 (582)
.+++++|... +....+..+++.... ... ..+++.++++.+|+.....++++. .|||||+|||+
T Consensus 84 ~~~~~~~q~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~ 161 (252)
T CHL00131 84 LGIFLAFQYPI--EIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNE 161 (252)
T ss_pred eeEEEEecccc--ccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccccCCCHHHHHHHH
Confidence 2456666542 222334444432110 001 124567889999997422234455 59999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhh-cCEEEEEeCCeEEEEcCCHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQV-AHEIWVCENQAVTRWEGDIM 568 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~-~d~i~~l~~G~i~~~~g~~~ 568 (582)
|||||+.+|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+ ||++++|++|+++ +.|+++
T Consensus 162 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~-~~~~~~ 237 (252)
T CHL00131 162 ILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKII-KTGDAE 237 (252)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEE-EecChh
Confidence 999999999999999999999999999999998875 57999999999999887 8999999999996 578877
No 319
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=318.30 Aligned_cols=204 Identities=22% Similarity=0.238 Sum_probs=166.7
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~--------- 429 (582)
.++|+++|++++|++ .++|+|+||+|.+|++++|+||||||||||+++|+|++. |++|+|.+.+.
T Consensus 8 ~~~l~i~~v~~~~~~-~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 8 ETVLRTENLNVYYGS-FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred ceEEEEeeeEEEECC-EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 468999999999964 579999999999999999999999999999999999986 47999987542
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhcC-----CCChHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKEY-----PGNEEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~lA 497 (582)
..++|++|+.. +.. .++.+++.... .....+.+.++++.+++... ....++.+|||||+|||+||
T Consensus 87 ~~~~~~i~~v~q~~~--~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~la 163 (264)
T PRK14243 87 VEVRRRIGMVFQKPN--PFP-KSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCIA 163 (264)
T ss_pred HHHhhhEEEEccCCc--ccc-ccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHHH
Confidence 13788888753 222 37777664321 11123446667888887421 22456789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEe---------CCeEEEEcCC
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCE---------NQAVTRWEGD 566 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~---------~G~i~~~~g~ 566 (582)
|||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.++||+|++|+ +|+++ +.|+
T Consensus 164 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~-~~~~ 242 (264)
T PRK14243 164 RAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLV-EFDR 242 (264)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEE-EeCC
Confidence 9999999999999999999999999999999876 4699999999999999999999998 79996 5888
Q ss_pred HHHHHH
Q 007982 567 IMDFKL 572 (582)
Q Consensus 567 ~~~~~~ 572 (582)
.+++..
T Consensus 243 ~~~~~~ 248 (264)
T PRK14243 243 TEKIFN 248 (264)
T ss_pred HHHHHh
Confidence 888753
No 320
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=2.7e-38 Score=312.49 Aligned_cols=188 Identities=27% Similarity=0.353 Sum_probs=156.8
Q ss_pred eEEEEEEEEEecC------CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEc--C---c-----
Q 007982 366 VLQFVEVTFGYTP------DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRH--N---H----- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~------~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~--~---~----- 429 (582)
+|+++|+++.|++ ...+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+. + .
T Consensus 1 ml~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~ 80 (224)
T TIGR02324 1 LLEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQAS 80 (224)
T ss_pred CEEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcC
Confidence 4789999999952 1469999999999999999999999999999999999999999999875 2 1
Q ss_pred ---------eeEEEechhhhhhcCCcccHHHHHHhc---CC--C-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHH
Q 007982 430 ---------LRIAQFHQHLAEKLDMDMSALQYMIKE---YP--G-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRV 494 (582)
Q Consensus 430 ---------~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~--~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv 494 (582)
..++|++|.+. +....++.+++... .. . ...+.+.++++.+|+.....+.++.+|||||+|||
T Consensus 81 ~~~~~~~~~~~i~~~~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrl 158 (224)
T TIGR02324 81 PREVLEVRRKTIGYVSQFLR--VIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHLPPATFSGGEQQRV 158 (224)
T ss_pred HHHHHHHHhcceEEEecccc--cCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhCCcccCCHHHHHHH
Confidence 24788888753 33455666665321 11 1 12356788999999976444567799999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEE
Q 007982 495 VFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVC 555 (582)
Q Consensus 495 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l 555 (582)
+|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||.+++..+||+++.+
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 159 NIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 9999999999999999999999999999999998875 579999999999999999999876
No 321
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-38 Score=313.15 Aligned_cols=200 Identities=25% Similarity=0.323 Sum_probs=167.3
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEech
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFHQ 437 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~q 437 (582)
|+++|+++.|++ . +|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..+++++|
T Consensus 1 l~~~~l~~~~~~-~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~~~~~i~~~~q 78 (235)
T cd03299 1 LKVENLSKDWKE-F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPPEKRDISYVPQ 78 (235)
T ss_pred CeeEeEEEEeCC-c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCChhHcCEEEEee
Confidence 468999999964 3 899999999999999999999999999999999999999999987652 25788888
Q ss_pred hhhhhcCCcccHHHHHHhcC--C---C-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 438 HLAEKLDMDMSALQYMIKEY--P---G-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~--~---~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
... +....++.+++.... . . ...+.+.++++.+|+..... +++.+|||||+|||+||||++.+|++|||||
T Consensus 79 ~~~--~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~qrl~laral~~~p~llllDE 155 (235)
T cd03299 79 NYA--LFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLN-RKPETLSGGEQQRVAIARALVVNPKILLLDE 155 (235)
T ss_pred cCc--cCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHh-cCcccCCHHHHHHHHHHHHHHcCCCEEEECC
Confidence 742 333456766664211 1 1 12345778899999976554 5568999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 512 PTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||+|||+.++..+.+.|+++ +.|||++|||++++..+||++++|++|+++ ..|+.+++..
T Consensus 156 Pt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 219 (235)
T cd03299 156 PFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLI-QVGKPEEVFK 219 (235)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEE-EecCHHHHHh
Confidence 99999999999999988764 579999999999999999999999999997 4788776644
No 322
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-38 Score=313.14 Aligned_cols=201 Identities=27% Similarity=0.390 Sum_probs=162.4
Q ss_pred EEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 367 LQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 367 l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
|+++|++++|++. .++++++||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999643 36999999999999999999999999999999999999999999987652 23788
Q ss_pred echhhhhhcCCcccHHHHHHhcCCCChHHH---------HHHHHHhc--CCCCccccCCCCCCChhHHHHHHHHHHHccC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEYPGNEEEK---------MRAAIGRF--GLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~--gl~~~~~~~~~~~LSgGqkqrv~lAral~~~ 503 (582)
++|... + +..++.+++........... +.++++.+ ++.... ..++.+|||||+|||+|||||+.+
T Consensus 81 ~~q~~~--~-~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~LS~G~~qrv~la~al~~~ 156 (234)
T cd03251 81 VSQDVF--L-FNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVI-GERGVKLSGGQRQRIAIARALLKD 156 (234)
T ss_pred eCCCCe--e-ccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceee-ccCCCcCCHHHHHHHHHHHHHhcC
Confidence 888753 2 23577777653221111112 23444455 555443 345689999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.. ||++++|++|++. ..|+++++...
T Consensus 157 p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~v~~l~~G~i~-~~~~~~~~~~~ 226 (234)
T cd03251 157 PPILILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIEN-ADRIVVLEDGKIV-ERGTHEELLAQ 226 (234)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhh-CCEEEEecCCeEe-eeCCHHHHHHc
Confidence 9999999999999999999999999876 5689999999999976 9999999999997 58888877543
No 323
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.1e-38 Score=309.76 Aligned_cols=197 Identities=25% Similarity=0.368 Sum_probs=152.3
Q ss_pred eEEeeeEEEECC-eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------HHHHH
Q 007982 73 IRIESLSVTFHG-HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------KLEKE 145 (582)
Q Consensus 73 i~v~nls~~y~~-~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~~~~~ 145 (582)
|+++|+++.|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... .....
T Consensus 1 l~~~~l~~~~~~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~----~~g~~i~~~~~~~~~~~ 76 (214)
T cd03292 1 IEFINVTKTYPNGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIR----VNGQDVSDLRGRAIPYL 76 (214)
T ss_pred CEEEEEEEEeCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEE----ECCEEcccCCHHHHHHH
Confidence 468999999965 6899999999999999999999999999999999999888765432 221110 00111
Q ss_pred HHHhcc--ccCC---CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 146 AEILGA--QEDG---GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 146 ~~~~~~--~~~~---~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
...+.+ +... .....+++..... .........++.++++.+|+.. ..++++.+||||||||++|||||+.+|
T Consensus 77 ~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~laral~~~p 155 (214)
T cd03292 77 RRKIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSH-KHRALPAELSGGEQQRVAIARAIVNSP 155 (214)
T ss_pred HHheEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHH-HhhCChhhcCHHHHHHHHHHHHHHcCC
Confidence 122222 2111 1123333322211 2233444567889999999974 567899999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeE
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQL 274 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i 274 (582)
++|||||||++||+.++..+.+.|+++ +.|+|+||||++++..+||++++|++|++
T Consensus 156 ~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 156 TILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999998765 57999999999999999999999999874
No 324
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-38 Score=319.55 Aligned_cols=204 Identities=21% Similarity=0.300 Sum_probs=168.2
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~--------- 429 (582)
.++|.++|++++|+ ++++|+|+||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+.+.
T Consensus 19 ~~~l~i~nl~~~~~-~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 19 APAMAAVNLTLGFA-GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred CcEEEEeeEEEEEC-CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 56899999999996 46899999999999999999999999999999999999986 6999987542
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhcC---CC-Ch---HHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKEY---PG-NE---EEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~~---~~-~~---~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|... +. ..++.+++.... .. .. ...+.++++.+++... ....++.+|||||+|||+|
T Consensus 98 ~~~~~i~~v~q~~~--l~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~L 174 (276)
T PRK14271 98 EFRRRVGMLFQRPN--PF-PMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCL 174 (276)
T ss_pred HHhhheEEeccCCc--cC-CccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHH
Confidence 24788888753 22 257777664221 11 11 2235677899998642 1235568999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||+|+.+|+||||||||++||+.++..+.+.|+++ ..|||+||||++++..+||++++|++|+++. .|+.+++..
T Consensus 175 Aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~-~g~~~~~~~ 251 (276)
T PRK14271 175 ARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVE-EGPTEQLFS 251 (276)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHHh
Confidence 99999999999999999999999999999998876 4799999999999999999999999999974 788887754
No 325
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.9e-38 Score=315.97 Aligned_cols=208 Identities=23% Similarity=0.327 Sum_probs=160.1
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHH-HH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKE-AE 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~-~~ 147 (582)
+|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ..... ..
T Consensus 2 ~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~----~~g~~~~~~~~~~~~~~ 77 (242)
T TIGR03411 2 ILYLEGLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVL----FGGTDLTGLPEHQIARA 77 (242)
T ss_pred eEEEEeeEEEcCCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEE----ECCeecCCCCHHHHHhc
Confidence 58999999999988999999999999999999999999999999999999888766432 222111 00111 11
Q ss_pred Hhcc--ccCC---CcchHHHHHHHHHc----------CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHH
Q 007982 148 ILGA--QEDG---GGEQLERVYERLEA----------LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALAR 212 (582)
Q Consensus 148 ~~~~--~~~~---~~~~~~~~~~~l~~----------~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 212 (582)
.+++ +... .....+++...... ......+.++.++++.+|+.. ..++++.+|||||+|||+|||
T Consensus 78 ~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 78 GIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLAD-EADRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred CeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCch-hhcCChhhCCHHHHHHHHHHH
Confidence 1221 1111 11223333211110 011234567889999999974 568899999999999999999
Q ss_pred HHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 213 ALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 213 aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||+.+|++|||||||++||+.++.++.++|+++ +.|||++||+++++..+||++++|++|+++ ..|+.+++.
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~-~~~~~~~~~ 230 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVL-AEGSLDQVQ 230 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEE-eeCCHHHHh
Confidence 999999999999999999999999999999876 469999999999999999999999999997 456766553
No 326
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.8e-38 Score=318.86 Aligned_cols=210 Identities=28% Similarity=0.411 Sum_probs=159.8
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH--------HHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL--------KLE 143 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~--------~~~ 143 (582)
+|+++||++.|+++.+|+++||+|.+|++++|+||||||||||+++|+|+.+|+.+. .|.+.+++... ...
T Consensus 4 ~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~-~G~i~~~g~~~~~~~~~~~~~~ 82 (262)
T PRK09984 4 IIRVEKLAKTFNQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSA-GSHIELLGRTVQREGRLARDIR 82 (262)
T ss_pred EEEEeeEEEEeCCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCC-ceEEEECCEecccccccchhHH
Confidence 799999999999999999999999999999999999999999999999998765310 12222222111 011
Q ss_pred HHHHHhcc--ccCC---CcchHHHHHHHHH----------cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHH
Q 007982 144 KEAEILGA--QEDG---GGEQLERVYERLE----------ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRI 208 (582)
Q Consensus 144 ~~~~~~~~--~~~~---~~~~~~~~~~~l~----------~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv 208 (582)
.....+++ +... .....+++..... .......+.++.++++.+|+.+ ..++++.+|||||||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv 161 (262)
T PRK09984 83 KSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVH-FAHQRVSTLSGGQQQRV 161 (262)
T ss_pred HHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHH-HHhCCccccCHHHHHHH
Confidence 11122222 2111 1122333321110 0011234567899999999964 56889999999999999
Q ss_pred HHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 209 ALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 209 ~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
+|||||+.+|+||||||||++||+.++.++.+.|+++ +.|||++|||++++..+||++++|++|+++ +.|+++++
T Consensus 162 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~-~~g~~~~~ 240 (262)
T PRK09984 162 AIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVF-YDGSSQQF 240 (262)
T ss_pred HHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHh
Confidence 9999999999999999999999999999999999765 579999999999999999999999999996 56777765
No 327
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-39 Score=292.90 Aligned_cols=204 Identities=23% Similarity=0.387 Sum_probs=172.9
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc--------------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-------------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-------------- 429 (582)
.+.|.++|+.++|+ ...+|++|||+-+.|+++.|+|.+||||||+|+||.=+..|+.|.|..++.
T Consensus 4 ~~~l~v~dlHK~~G-~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 4 ENALEVEDLHKRYG-EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred ccceehhHHHhhcc-cchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeee
Confidence 35689999999996 467999999999999999999999999999999999999999999976542
Q ss_pred ----------eeEEEechhhhhhcCCcccHHHHHHhcC------CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHH
Q 007982 430 ----------LRIAQFHQHLAEKLDMDMSALQYMIKEY------PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRS 492 (582)
Q Consensus 430 ----------~~~~~~~q~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkq 492 (582)
.+.++++|++. +-..+|+++++.... ++ ...++++.+|..+|+.+.....| ..|||||+|
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FN--LWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-~~LSGGQQQ 159 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFN--LWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYP-AHLSGGQQQ 159 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcc--hhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCc-cccCchHHH
Confidence 12455666653 223467888776431 11 23567889999999988776666 699999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHH
Q 007982 493 RVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMD 569 (582)
Q Consensus 493 rv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 569 (582)
|++|||||+.+|+++|+|||||+|||+-..++...++++ +.|+++|||.|.|+.+++..|+++++|.|- -+|++++
T Consensus 160 R~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iE-E~G~P~q 238 (256)
T COG4598 160 RVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIE-EEGPPEQ 238 (256)
T ss_pred HHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceec-ccCChHH
Confidence 999999999999999999999999999999888887765 789999999999999999999999999995 5999998
Q ss_pred HHH
Q 007982 570 FKL 572 (582)
Q Consensus 570 ~~~ 572 (582)
+..
T Consensus 239 vf~ 241 (256)
T COG4598 239 VFG 241 (256)
T ss_pred Hhc
Confidence 865
No 328
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-38 Score=323.71 Aligned_cols=213 Identities=18% Similarity=0.266 Sum_probs=158.7
Q ss_pred ceEEeeeEEEECCe-----eeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechH--HHH-HH
Q 007982 72 DIRIESLSVTFHGH-----DLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDE--ERL-KL 142 (582)
Q Consensus 72 ~i~v~nls~~y~~~-----~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~--~~~-~~ 142 (582)
.|+++|++++|+++ .+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+... ..+.. ... ..
T Consensus 6 ~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 85 (289)
T PRK13645 6 DIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKEV 85 (289)
T ss_pred eEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccccH
Confidence 69999999999764 49999999999999999999999999999999999998876643210 00100 000 01
Q ss_pred HHHHHHhcc--ccCC----CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHH
Q 007982 143 EKEAEILGA--QEDG----GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARAL 214 (582)
Q Consensus 143 ~~~~~~~~~--~~~~----~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 214 (582)
......+++ +... .....+++..... .........++.++++.+++.....++++.+|||||||||+|||||
T Consensus 86 ~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~~~~LS~Gq~qrv~laral 165 (289)
T PRK13645 86 KRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRSPFELSGGQKRRVALAGII 165 (289)
T ss_pred HHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCChhhCCHHHHHHHHHHHHH
Confidence 111122322 2211 0112222221111 1223344466788999999954456889999999999999999999
Q ss_pred hcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 215 FINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 215 ~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+.+|++|||||||++||+.++..+.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 166 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 239 (289)
T PRK13645 166 AMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVIS-IGSPFEIF 239 (289)
T ss_pred HhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999999988754 6799999999999999999999999999974 46666543
No 329
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-38 Score=328.75 Aligned_cols=213 Identities=21% Similarity=0.259 Sum_probs=158.0
Q ss_pred ceEEeeeEEEE----CCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------H
Q 007982 72 DIRIESLSVTF----HGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------K 141 (582)
Q Consensus 72 ~i~v~nls~~y----~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~ 141 (582)
+|+++||++.| +...+|+|+||+|.+||+++|+|+||||||||+++|+|+.++......|.+.+++..+ .
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 68999999999 3467999999999999999999999999999999999998642111123333322211 0
Q ss_pred HHHHH-HHhc--cccCCC-----cchHHHHHHHHHcC--------ChhHHHHHHHHHHHhCCCCh--hhhhccCCCCChh
Q 007982 142 LEKEA-EILG--AQEDGG-----GEQLERVYERLEAL--------DASTAEKRAAEILYGLGFNK--TMQAKKTRDFSGG 203 (582)
Q Consensus 142 ~~~~~-~~~~--~~~~~~-----~~~~~~~~~~l~~~--------~~~~~~~~~~~~l~~lgl~~--~~~~~~~~~LSGG 203 (582)
..... ..++ +|.... ......+.+.+... .....+.++.++|+.+||.+ ...++++.+||||
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p~~LSgG 162 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELTEG 162 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCchhCCHH
Confidence 11100 1122 222211 11222332222111 11234567899999999974 2457899999999
Q ss_pred HHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcC
Q 007982 204 WRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTG 279 (582)
Q Consensus 204 qrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g 279 (582)
|||||+|||||+.+|+||||||||++||+.++.++.++|+++ +.|+|+||||++++..+||+|++|++|+|+. .|
T Consensus 163 ~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ive-~g 241 (330)
T PRK15093 163 ECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQTVE-TA 241 (330)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-EC
Confidence 999999999999999999999999999999999999998764 6799999999999999999999999999974 56
Q ss_pred ChhHHH
Q 007982 280 NFDQYV 285 (582)
Q Consensus 280 ~~~~~~ 285 (582)
+.+++.
T Consensus 242 ~~~~i~ 247 (330)
T PRK15093 242 PSKELV 247 (330)
T ss_pred CHHHHH
Confidence 666554
No 330
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.6e-38 Score=303.42 Aligned_cols=174 Identities=31% Similarity=0.487 Sum_probs=144.2
Q ss_pred EEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCcc
Q 007982 368 QFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMDM 447 (582)
Q Consensus 368 ~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~~ 447 (582)
+++|+++.|++ .++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.. +..... ..
T Consensus 1 ~~~~l~~~~~~-~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~-~~~~~~---~~----- 70 (180)
T cd03214 1 EVENLSVGYGG-RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKD-LASLSP---KE----- 70 (180)
T ss_pred CeeEEEEEECC-eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEE-CCcCCH---HH-----
Confidence 47899999964 679999999999999999999999999999999999999999999886531 111000 00
Q ss_pred cHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHH
Q 007982 448 SALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEA 527 (582)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~ 527 (582)
.... ...+.++++.+|+.+.. +.++.+|||||+||++||||++.+|++|||||||++||+.++..+.+.
T Consensus 71 -~~~~---------i~~~~q~l~~~gl~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~ 139 (180)
T cd03214 71 -LARK---------IAYVPQALELLGLAHLA-DRPFNELSGGERQRVLLARALAQEPPILLLDEPTSHLDIAHQIELLEL 139 (180)
T ss_pred -HHHH---------HhHHHHHHHHcCCHhHh-cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH
Confidence 0000 01112288899998654 456689999999999999999999999999999999999999999999
Q ss_pred HHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 528 LNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 528 l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
|.++ +.|+|++|||++++.++||++++|++|++..
T Consensus 140 l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 178 (180)
T cd03214 140 LRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVA 178 (180)
T ss_pred HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 8765 5699999999999999999999999999863
No 331
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=7.8e-38 Score=314.96 Aligned_cols=209 Identities=24% Similarity=0.335 Sum_probs=159.6
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHH-----H---HHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEER-----L---KLE 143 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~-----~---~~~ 143 (582)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++.. . ...
T Consensus 3 ~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~----~~g~~~~~~~~~~~~~~ 78 (253)
T TIGR02323 3 LLQVSGLSKSYGGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTAT----YIMRSGAELELYQLSEA 78 (253)
T ss_pred eEEEeeeEEEeCCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE----EecccccccccccCCHH
Confidence 69999999999988899999999999999999999999999999999999988765432 22111 1 000
Q ss_pred HH----HHHhcc--ccCC-----CcchHHHHHHHHHcC---ChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHH
Q 007982 144 KE----AEILGA--QEDG-----GGEQLERVYERLEAL---DASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIA 209 (582)
Q Consensus 144 ~~----~~~~~~--~~~~-----~~~~~~~~~~~l~~~---~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~ 209 (582)
.. ...+++ +... .....+++...+... .....+..+.++++.+|+.....++.+.+|||||||||+
T Consensus 79 ~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~qrv~ 158 (253)
T TIGR02323 79 ERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQRLQ 158 (253)
T ss_pred HHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcCchhcCHHHHHHHH
Confidence 00 111222 2211 011222332221111 112345678899999999644568899999999999999
Q ss_pred HHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 210 LARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 210 LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||||+.+|++|||||||++||+.++.++.++|.++ +.|+|+|||+++++..+||++++|++|+++. .|+.+++.
T Consensus 159 laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~-~~~~~~~~ 237 (253)
T TIGR02323 159 IARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVE-SGLTDQVL 237 (253)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-ECCHHHHh
Confidence 999999999999999999999999999999988653 6799999999999999999999999999974 46655543
No 332
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-38 Score=315.49 Aligned_cols=202 Identities=23% Similarity=0.301 Sum_probs=165.6
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc-----------
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH----------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~----------- 429 (582)
.|+++|+++.|++ +++++|+||+|.+||+++|+||||||||||+++|+|+++| ++|+|.+.+.
T Consensus 3 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 81 (250)
T PRK14240 3 KISVKDLDLFYGD-FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQ 81 (250)
T ss_pred eEEEEEEEEEECC-ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHH
Confidence 5889999999964 5799999999999999999999999999999999999763 6999987542
Q ss_pred --eeEEEechhhhhhcCCcccHHHHHHhc--CCC-----ChHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHHHH
Q 007982 430 --LRIAQFHQHLAEKLDMDMSALQYMIKE--YPG-----NEEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 430 --~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~lA 497 (582)
..++|++|... +. ..++.+++... ... ...+.+.++++.+++.. ...+.++.+|||||+|||+||
T Consensus 82 ~~~~i~~~~q~~~--~~-~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la 158 (250)
T PRK14240 82 LRKRVGMVFQQPN--PF-PMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCIA 158 (250)
T ss_pred HhccEEEEecCCc--cC-cccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHHH
Confidence 24788888743 22 25677666421 111 12345677888888742 123456789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|+|+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||++++|++|+++ ..|+.+++..
T Consensus 159 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~~ 234 (250)
T PRK14240 159 RALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIV-EFGDTVDLFT 234 (250)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 9999999999999999999999999999999876 469999999999999999999999999997 4788777653
No 333
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.8e-38 Score=313.36 Aligned_cols=201 Identities=27% Similarity=0.333 Sum_probs=168.5
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------eeEEEech
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------LRIAQFHQ 437 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------~~~~~~~q 437 (582)
|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..++|++|
T Consensus 1 i~i~~l~~~~~~-~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~~~~~i~~~~q 79 (237)
T TIGR00968 1 IEIANISKRFGS-FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHARDRKIGFVFQ 79 (237)
T ss_pred CEEEEEEEEECC-eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCChhhcCEEEEec
Confidence 468999999974 67999999999999999999999999999999999999999999976542 24788888
Q ss_pred hhhhhcCCcccHHHHHHhcC---C-C--ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 438 HLAEKLDMDMSALQYMIKEY---P-G--NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~---~-~--~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
... +....++.+++.... . . ...+.+.++++.+++.... +.++..||+||+||++|||+|+.+|++|||||
T Consensus 80 ~~~--~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~lS~G~~qrl~laral~~~p~llllDE 156 (237)
T TIGR00968 80 HYA--LFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLG-DRYPNQLSGGQRQRVALARALAVEPQVLLLDE 156 (237)
T ss_pred Chh--hccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 753 333456776664221 1 1 1234578899999997554 45668999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 512 PTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||+|||+.++..+.+.|.+. +.|||++||+++++..+||++++|++|+++ +.|+.+++..
T Consensus 157 P~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~-~~~~~~~~~~ 220 (237)
T TIGR00968 157 PFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIE-QIGSPDEVYD 220 (237)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEE-EecCHHHHHc
Confidence 99999999999999998764 579999999999999999999999999997 4788887754
No 334
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-38 Score=322.22 Aligned_cols=209 Identities=24% Similarity=0.347 Sum_probs=159.9
Q ss_pred ceEEeeeEEEECC-----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------
Q 007982 72 DIRIESLSVTFHG-----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------ 140 (582)
Q Consensus 72 ~i~v~nls~~y~~-----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------ 140 (582)
.|+++||+++|++ +++|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++...
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~----~~g~~i~~~~~~ 77 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVR----VDDTLITSTSKN 77 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEEccccccc
Confidence 3889999999975 3699999999999999999999999999999999999888765432 221110
Q ss_pred -HHHHHHHHhc--cccC----CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHH
Q 007982 141 -KLEKEAEILG--AQED----GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 141 -~~~~~~~~~~--~~~~----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LA 211 (582)
........++ ++.. ......+++..... .........++.++++.+|+.....++++.+|||||||||+||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la 157 (280)
T PRK13649 78 KDIKQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKNPFELSGGQMRRVAIA 157 (280)
T ss_pred cCHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCCcccCCHHHHHHHHHH
Confidence 0011112222 2211 01122333321111 2233445567888999999974456889999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 233 (280)
T PRK13649 158 GILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVL-SGKPKDIF 233 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999999999998765 5799999999999999999999999999974 46666554
No 335
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=348.74 Aligned_cols=202 Identities=24% Similarity=0.307 Sum_probs=171.1
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC--CCcEEEEcCc------------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP--LDGMVRRHNH------------ 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p--~~G~i~~~~~------------ 429 (582)
.++|+++|++++|+ ++.+|+|+||+|.+|++++|+||||||||||+|+|+|+++| ++|+|.+.+.
T Consensus 3 ~~~l~~~nl~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 3 EYLLEMKNITKTFG-GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred CceEEEeeeEEEeC-CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 46899999999996 46799999999999999999999999999999999999996 8999987542
Q ss_pred eeEEEechhhhhhcCCcccHHHHHHhcC-----C--CC--hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHH
Q 007982 430 LRIAQFHQHLAEKLDMDMSALQYMIKEY-----P--GN--EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 430 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~--~~--~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 500 (582)
..++|++|.+. +....++.+++.... . .. ..+++.++++.+|+.... ++++.+|||||||||+|||||
T Consensus 82 ~~i~~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGqkqrv~la~al 158 (506)
T PRK13549 82 AGIAIIHQELA--LVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINP-ATPVGNLGLGQQQLVEIAKAL 158 (506)
T ss_pred CCeEEEEeccc--cCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCc-ccchhhCCHHHHHHHHHHHHH
Confidence 24889999753 444567877764321 0 11 134678899999997654 467799999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
+.+|+||||||||++||+.++..+.+.|.++ +.|||+||||++++..+||+|++|++|+++ ++|+.+++
T Consensus 159 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~ 230 (506)
T PRK13549 159 NKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHI-GTRPAAGM 230 (506)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEe-eecccccC
Confidence 9999999999999999999999999998775 579999999999999999999999999996 56776654
No 336
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-38 Score=316.48 Aligned_cols=206 Identities=22% Similarity=0.322 Sum_probs=168.7
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcC--------------
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHN-------------- 428 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~-------------- 428 (582)
..|+|.++|++++|+ ++.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+
T Consensus 7 ~~~~i~~~~~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~ 85 (257)
T PRK14246 7 AEDVFNISRLYLYIN-DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDA 85 (257)
T ss_pred hhhheeeeeEEEecC-CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCH
Confidence 457899999999996 46799999999999999999999999999999999999999997665432
Q ss_pred ---ceeEEEechhhhhhcCCcccHHHHHHhc-----CCCC-h-HHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHH
Q 007982 429 ---HLRIAQFHQHLAEKLDMDMSALQYMIKE-----YPGN-E-EEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 429 ---~~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~-~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 495 (582)
...++|++|... +....++.+++... .... + .+.+.++++.+++.. .....++..||+|||||++
T Consensus 86 ~~~~~~i~~~~q~~~--~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl~ 163 (257)
T PRK14246 86 IKLRKEVGMVFQQPN--PFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLT 163 (257)
T ss_pred HHHhcceEEEccCCc--cCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHHHHHH
Confidence 124678887753 33445777666421 1111 1 245678899999853 1223456899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||++.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++..+||++++|++|++.. .|+.+++..
T Consensus 164 laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~-~g~~~~~~~ 241 (257)
T PRK14246 164 IARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVE-WGSSNEIFT 241 (257)
T ss_pred HHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEE-ECCHHHHHh
Confidence 999999999999999999999999999999999876 4799999999999999999999999999975 677777764
No 337
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.5e-38 Score=311.17 Aligned_cols=206 Identities=19% Similarity=0.298 Sum_probs=154.9
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHH-HHH
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKE-AEI 148 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~-~~~ 148 (582)
|+++||+++|+++.+|+++||+|.+|++++|+||||||||||+++|+|+.+++.|.+. +++... ..... ...
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~----~~g~~~~~~~~~~~~~~~ 76 (222)
T cd03224 1 LEVENLNAGYGKSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIR----FDGRDITGLPPHERARAG 76 (222)
T ss_pred CEEeeEEeecCCeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEE----ECCEEcCCCCHHHHHhcC
Confidence 5789999999988999999999999999999999999999999999999988766432 221110 00000 111
Q ss_pred hcc--ccCC---CcchHHHHHHHHHcCChhHHHHHHHHHHHhC-CCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 149 LGA--QEDG---GGEQLERVYERLEALDASTAEKRAAEILYGL-GFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l-gl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
+++ +... .....+++..............++.++++.+ ++.. ..++++.+|||||||||+|||||+.+|++||
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~~~~LS~G~~qrv~laral~~~p~lll 155 (222)
T cd03224 77 IGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFPRLKE-RRKQLAGTLSGGEQQMLAIARALMSRPKLLL 155 (222)
T ss_pred eEEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhhh-hhhCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 221 2111 1122233322111111223345667788887 4653 5678999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 223 LDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||||++||+.++..+.++|+++ +.|||++|||++++..+||++++|++|+++. .|+.+++
T Consensus 156 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 219 (222)
T cd03224 156 LDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVL-EGTAAEL 219 (222)
T ss_pred ECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEE-eCCHHHH
Confidence 99999999999999999999765 5799999999999999999999999999964 4655443
No 338
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.7e-38 Score=326.11 Aligned_cols=199 Identities=21% Similarity=0.342 Sum_probs=154.0
Q ss_pred EEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH--HHHHHHHHhcc--ccCC
Q 007982 80 VTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL--KLEKEAEILGA--QEDG 155 (582)
Q Consensus 80 ~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~--~~~~ 155 (582)
++|+++.+|+|+||+|++|+++||+||||||||||+++|+|+.+|+.|.+. +++... ........+++ +...
T Consensus 1 k~y~~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~----~~g~~~~~~~~~~~~~i~~~~q~~~ 76 (302)
T TIGR01188 1 KVYGDFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTAR----VAGYDVVREPRKVRRSIGIVPQYAS 76 (302)
T ss_pred CeeCCeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEEcccCHHHHHhhcEEecCCCC
Confidence 468888999999999999999999999999999999999999988766432 221111 00111122332 2211
Q ss_pred ---CcchHHHHHH--HHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCCCCCC
Q 007982 156 ---GGEQLERVYE--RLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHL 230 (582)
Q Consensus 156 ---~~~~~~~~~~--~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~~L 230 (582)
.....+++.. .+..........++.++++.+|+.. ..++++.+|||||||||+|||||+.+|++|||||||+||
T Consensus 77 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gL 155 (302)
T TIGR01188 77 VDEDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGE-AADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGL 155 (302)
T ss_pred CCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-HhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 1123333321 1222334455667899999999975 568899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 231 DLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 231 D~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|+.++.++.++|+++ +.|||++||+++++..+||+|++|++|+++. .|+++++
T Consensus 156 D~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~l 211 (302)
T TIGR01188 156 DPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIA-EGTPEEL 211 (302)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEE-ECCHHHH
Confidence 999999999999775 5799999999999999999999999999974 5666554
No 339
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.7e-38 Score=308.08 Aligned_cols=186 Identities=23% Similarity=0.387 Sum_probs=157.4
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEe
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQF 435 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~ 435 (582)
+|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|+
T Consensus 1 ~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~~~~~~~~~~~ 79 (204)
T PRK13538 1 MLEARNLACERDE-RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQRDEYHQDLLYL 79 (204)
T ss_pred CeEEEEEEEEECC-EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccchHHhhhheEEe
Confidence 4789999999964 67999999999999999999999999999999999999999999987653 136677
Q ss_pred chhhhhhcCCcccHHHHHHhc--C-CCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCC
Q 007982 436 HQHLAEKLDMDMSALQYMIKE--Y-PGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEP 512 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 512 (582)
+|... +....++.+++... . .....++++++++.+|+.+.. ++++.+|||||+|||+||||++.+|++||||||
T Consensus 80 ~~~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrl~la~al~~~p~llllDEP 156 (204)
T PRK13538 80 GHQPG--IKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFE-DVPVRQLSAGQQRRVALARLWLTRAPLWILDEP 156 (204)
T ss_pred CCccc--cCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHh-hCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 76542 33446777776432 1 113446788999999997654 456789999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEE
Q 007982 513 TNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVC 555 (582)
Q Consensus 513 t~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l 555 (582)
|++||+.++..+.+.|+++ +.|||+||||++++..+.+|++++
T Consensus 157 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 157 FTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 9999999999999999876 579999999999999988888877
No 340
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.2e-38 Score=303.06 Aligned_cols=206 Identities=21% Similarity=0.360 Sum_probs=171.2
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhcc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILGA 151 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 151 (582)
++++++|+|+|+++.+++|+||++++|++.|++|+|||||||++|+|.|+..++.| .|.|++...... ....+++
T Consensus 2 ~L~ie~vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~~G----~I~~~g~~~~~~-~~~rIGy 76 (300)
T COG4152 2 ALEIEGVTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPTEG----EITWNGGPLSQE-IKNRIGY 76 (300)
T ss_pred ceEEecchhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCccCc----eEEEcCcchhhh-hhhhccc
Confidence 58999999999999999999999999999999999999999999999999998855 445555433221 1122332
Q ss_pred ccCC-----CcchHHH--HHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeec
Q 007982 152 QEDG-----GGEQLER--VYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLD 224 (582)
Q Consensus 152 ~~~~-----~~~~~~~--~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLD 224 (582)
-+.. ...+.+. .+..+.+++..+++.++..||+++++... ..+++.+||-|++|++.+..+++++|+++|||
T Consensus 77 LPEERGLy~k~tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~-~~~kIk~LSKGnqQKIQfisaviHePeLlILD 155 (300)
T COG4152 77 LPEERGLYPKMTVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGK-KTKKIKELSKGNQQKIQFISAVIHEPELLILD 155 (300)
T ss_pred ChhhhccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcccccc-ccchHHHhhhhhhHHHHHHHHHhcCCCEEEec
Confidence 2211 1222222 35567789999999999999999999864 57899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhh---cCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 225 EPTNHLDLEACVWLEETLKK---FDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 225 EPt~~LD~~~~~~l~~~l~~---~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
||+|||||.+.+.|.+.+.+ .|.|||++||.|+-++++||+++.|++|+.+.+ |+..+.
T Consensus 156 EPFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me~vEeLCD~llmL~kG~~V~~-G~v~~i 217 (300)
T COG4152 156 EPFSGLDPVNVELLKDAIFELKEEGATIIFSSHRMEHVEELCDRLLMLKKGQTVLY-GTVEDI 217 (300)
T ss_pred CCccCCChhhHHHHHHHHHHHHhcCCEEEEecchHHHHHHHhhhhheecCCceEEe-ccHHHH
Confidence 99999999999999998765 478999999999999999999999999999864 665544
No 341
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.8e-38 Score=320.28 Aligned_cols=209 Identities=25% Similarity=0.391 Sum_probs=160.3
Q ss_pred ceEEeeeEEEEC---------CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH--
Q 007982 72 DIRIESLSVTFH---------GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-- 140 (582)
Q Consensus 72 ~i~v~nls~~y~---------~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-- 140 (582)
+|+++||++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++...
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~i~~ 77 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVS----FRGQDLYQ 77 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE----ECCEEccc
Confidence 689999999995 36799999999999999999999999999999999999988766432 221111
Q ss_pred ----HHHHHHHHhcc--ccC-----CCcchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHH
Q 007982 141 ----KLEKEAEILGA--QED-----GGGEQLERVYERLE---ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRM 206 (582)
Q Consensus 141 ----~~~~~~~~~~~--~~~-----~~~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrq 206 (582)
........+++ +.. ......+++...+. .+.......++.++++.+|+.....++++.+|||||||
T Consensus 78 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~q 157 (265)
T TIGR02769 78 LDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKLPRQLSGGQLQ 157 (265)
T ss_pred cCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCChhhCCHHHHH
Confidence 00011122222 211 11222333322111 23333445678899999999644568899999999999
Q ss_pred HHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChh
Q 007982 207 RIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFD 282 (582)
Q Consensus 207 Rv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~ 282 (582)
||+|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ +.|+.+
T Consensus 158 rv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~ 236 (265)
T TIGR02769 158 RINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIV-EECDVA 236 (265)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEE-EECCHH
Confidence 999999999999999999999999999999999988764 679999999999999999999999999997 457766
Q ss_pred HHH
Q 007982 283 QYV 285 (582)
Q Consensus 283 ~~~ 285 (582)
++.
T Consensus 237 ~~~ 239 (265)
T TIGR02769 237 QLL 239 (265)
T ss_pred HHc
Confidence 543
No 342
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-38 Score=313.73 Aligned_cols=208 Identities=25% Similarity=0.394 Sum_probs=160.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HH-HHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KL-EKEAE 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~-~~~~~ 147 (582)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... .. .....
T Consensus 3 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~----~~g~~~~~~~~~~~~~~ 78 (241)
T PRK10895 3 TLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNII----IDDEDISLLPLHARARR 78 (241)
T ss_pred eEEEeCcEEEeCCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE----ECCEECCCCCHHHHHHh
Confidence 69999999999988999999999999999999999999999999999999888766432 211110 00 00111
Q ss_pred Hhcc--ccCC---CcchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCC
Q 007982 148 ILGA--QEDG---GGEQLERVYERLE---ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPT 219 (582)
Q Consensus 148 ~~~~--~~~~---~~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~ 219 (582)
.+++ +... .....+++..... .......+.++.++++.+|+.. ..++++.+|||||+|||+|||||+.+|+
T Consensus 79 ~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~laral~~~p~ 157 (241)
T PRK10895 79 GIGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEH-LRDSMGQSLSGGERRRVEIARALAANPK 157 (241)
T ss_pred CeEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHH-HhhcchhhCCHHHHHHHHHHHHHhcCCC
Confidence 2222 2111 1122333321111 1223344567889999999974 5678999999999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 220 ILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 220 lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+|||||||++||+.++.++.+.|.++ +.|+|++||+++++..+||++++|++|+++. .|+++++.
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~ 225 (241)
T PRK10895 158 FILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIA-HGTPTEIL 225 (241)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEe-eCCHHHHh
Confidence 99999999999999999998887653 6799999999999999999999999999974 57776654
No 343
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.4e-38 Score=313.54 Aligned_cols=207 Identities=23% Similarity=0.357 Sum_probs=158.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH--HHHHHHHh
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK--LEKEAEIL 149 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~ 149 (582)
+|+++|++++|+++.+|+++||+|.+|++++|+||||||||||+++|+|+.+|+.|.+. +++.... .......+
T Consensus 1 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~----~~g~~i~~~~~~~~~~i 76 (236)
T TIGR03864 1 ALEVAGLSFAYGARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQIS----VAGHDLRRAPRAALARL 76 (236)
T ss_pred CEEEEeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEE----ECCEEcccCChhhhhhE
Confidence 47899999999988999999999999999999999999999999999999988765432 2211110 00111122
Q ss_pred cc--ccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 150 GA--QEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 150 ~~--~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
++ +... .....+++.... ...........+.++++.+|+.. ..++++.+|||||+|||+|||||+.+|++||
T Consensus 77 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G~~qrl~laral~~~p~lll 155 (236)
T TIGR03864 77 GVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAE-RADDKVRELNGGHRRRVEIARALLHRPALLL 155 (236)
T ss_pred EEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-hhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 22 2211 122233332211 12223334567889999999974 5678999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 223 LDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||||++||+.++..+.+.|+++ +.|+|++|||++++.. ||++++|++|+++. .|+.+++.
T Consensus 156 lDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~-~d~i~~l~~G~i~~-~~~~~~~~ 220 (236)
T TIGR03864 156 LDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEA-DDRLVVLHRGRVLA-DGAAAELR 220 (236)
T ss_pred EcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhh-CCEEEEEeCCeEEE-eCCHHHHH
Confidence 99999999999999999998764 5799999999999975 99999999999974 56665543
No 344
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-38 Score=316.67 Aligned_cols=209 Identities=19% Similarity=0.304 Sum_probs=158.8
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS-----DMSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~-----~~~~~~~~i~~~~~~~-----~ 141 (582)
+|+++|+++.|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+.++ +.|. +.+++... .
T Consensus 12 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~----i~~~g~~i~~~~~~ 87 (258)
T PRK14268 12 QIKVENLNLWYGEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGK----VSIEGEDIYEPDVD 87 (258)
T ss_pred eEEEeeeEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceE----EEECCEEcccccch
Confidence 79999999999988999999999999999999999999999999999998764 3333 22222111 0
Q ss_pred HHHHHHHhcc--ccCC--CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCC---hhhhhccCCCCChhHHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDG--GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFN---KTMQAKKTRDFSGGWRMRIALAR 212 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~--~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~---~~~~~~~~~~LSGGqrqRv~LAr 212 (582)
.......+++ +... .....+++..... .........++.++++.+|+. ....++++.+|||||+|||+|||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~lar 167 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLKSPALSLSGGQQQRLCIAR 167 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHHHH
Confidence 0111122332 2111 1223333322111 223333455688899999884 23457889999999999999999
Q ss_pred HHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 213 ALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 213 aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|.++++.
T Consensus 168 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 241 (258)
T PRK14268 168 TLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIE-FGQTRQIF 241 (258)
T ss_pred HHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999999999875 4799999999999999999999999999974 56666543
No 345
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=313.68 Aligned_cols=203 Identities=21% Similarity=0.269 Sum_probs=166.3
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCC-----CcEEEEcCc----------
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPL-----DGMVRRHNH---------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~-----~G~i~~~~~---------- 429 (582)
++|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++|+ +|+|...+.
T Consensus 3 ~~l~~~~l~~~~~~-~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 3 PKIKIRGVNFFYHK-HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred ceEEEEEEEEEECC-eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 57899999999964 67999999999999999999999999999999999999997 699876431
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc--C---CCC--hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE--Y---PGN--EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~--~---~~~--~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|... +. ..++.+++... + ... ..+.+..+++.+++... ....++.+|||||+|||+|
T Consensus 82 ~~~~~i~~v~q~~~--~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~l 158 (251)
T PRK14249 82 NLRKRVGMVFQQPN--PF-PKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCI 158 (251)
T ss_pred HhhceEEEEecCCc--cC-cCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 24788888753 22 23777766421 1 111 12446667888887421 2345678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||+.+|++|||||||+|||+.++..+.++|.++ +.|||+||||++++..+||++++|++|++.. .|++++...
T Consensus 159 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~~ 235 (251)
T PRK14249 159 ARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVE-YGRTGEIFS 235 (251)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEE-eCCHHHHHh
Confidence 99999999999999999999999999999998876 4799999999999999999999999999974 788877654
No 346
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=313.98 Aligned_cols=203 Identities=21% Similarity=0.287 Sum_probs=164.8
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC--C---CCcEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV--P---LDGMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~--p---~~G~i~~~~~--------- 429 (582)
+++|+++|+++.|+. +.+|+|+||+|.+|++++|+||||||||||+++|+|+++ | ++|+|...+.
T Consensus 3 ~~~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 3 KKIITSSDVHLFYGK-FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred cceEEEEeEEEEECC-eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 568999999999974 679999999999999999999999999999999999875 5 5899976542
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhc--C---CCCh--HHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKE--Y---PGNE--EEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~---~~~~--~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~ 495 (582)
..++|++|... +.. .++.+++... . .... .+.+.++++.+++.. .....++.+|||||+|||+
T Consensus 82 ~~~~~~i~~~~q~~~--~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~ 158 (252)
T PRK14255 82 VQLRKQVGMVFQQPN--PFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRVC 158 (252)
T ss_pred HHhcCeEEEEECCCc--cCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHHH
Confidence 24788888753 222 4666665421 1 1111 234567788887642 1234567899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|||+|+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|+++. .|+..+..
T Consensus 159 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 235 (252)
T PRK14255 159 IARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIE-FADTKQMF 235 (252)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999999999999999876 4799999999999999999999999999975 66666654
No 347
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-38 Score=314.91 Aligned_cols=201 Identities=18% Similarity=0.243 Sum_probs=164.3
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc------------
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH------------ 429 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~------------ 429 (582)
-+++|+++.|+ ++++|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+.+.
T Consensus 6 ~~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 84 (251)
T PRK14244 6 ASVKNLNLWYG-SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLL 84 (251)
T ss_pred EEeeeEEEEEC-CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHH
Confidence 36899999996 4679999999999999999999999999999999999986 47999987542
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc--C-C---C--ChHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHHH
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE--Y-P---G--NEEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~--~-~---~--~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~lA 497 (582)
..++|++|... +.. .++.+++... . . . ...+.+.++++.+|+... ....++.+|||||||||+||
T Consensus 85 ~~~i~~v~q~~~--~~~-~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~la 161 (251)
T PRK14244 85 RAKVGMVFQKPN--PFP-KSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIA 161 (251)
T ss_pred hhhEEEEecCcc--ccc-CCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHH
Confidence 24788888753 222 3666665321 1 1 1 122456788999999642 22345689999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|+|+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++|+++ +.|+..++..
T Consensus 162 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 237 (251)
T PRK14244 162 RAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIV-EYNTTQEIFK 237 (251)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999999999999999876 479999999999999999999999999996 5788877754
No 348
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=316.86 Aligned_cols=204 Identities=23% Similarity=0.268 Sum_probs=167.9
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~--------- 429 (582)
.++|+++|++++|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+.+.
T Consensus 23 ~~~l~~~nl~~~~~~-~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~ 101 (272)
T PRK14236 23 QTALEVRNLNLFYGD-KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDV 101 (272)
T ss_pred CcEEEEEEEEEEECC-eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCH
Confidence 568999999999964 5799999999999999999999999999999999999874 8999976542
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhc--CCC--C---hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKE--YPG--N---EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~--~---~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~ 495 (582)
..++|++|... +.. .++.+++... ... . ..+.+.++++.+++... ..+.++.+|||||+|||+
T Consensus 102 ~~~~~~i~~v~q~~~--l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 178 (272)
T PRK14236 102 AELRRRVGMVFQRPN--PFP-KSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLSGGQQQRLV 178 (272)
T ss_pred HHHhccEEEEecCCc--cCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCCHHHHHHHH
Confidence 24778888743 222 3777766421 111 1 12457778888988531 223566899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++.++||+|++|++|++. ..|+++++..
T Consensus 179 laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 256 (272)
T PRK14236 179 IARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLV-EYGDTDTLFT 256 (272)
T ss_pred HHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEE-ecCCHHHHhc
Confidence 999999999999999999999999999999998876 479999999999999999999999999996 5788887753
No 349
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=4.3e-38 Score=310.97 Aligned_cols=191 Identities=25% Similarity=0.322 Sum_probs=156.7
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCc
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMD 446 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~ 446 (582)
+.++++++.|++ +++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.. +...... ..+...
T Consensus 23 l~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~-~~~~~~~--~~~~~~ 98 (224)
T cd03220 23 LGILGRKGEVGE-FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRV-SSLLGLG--GGFNPE 98 (224)
T ss_pred hhhhhhhhhcCC-eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEE-chhhccc--ccCCCC
Confidence 778999999964 679999999999999999999999999999999999999999999987642 1111111 122344
Q ss_pred ccHHHHHHhc---CC-CC--hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHH
Q 007982 447 MSALQYMIKE---YP-GN--EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIET 520 (582)
Q Consensus 447 ~~~~~~~~~~---~~-~~--~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~ 520 (582)
.|+.+++... .. .. ..+.+.++++.+|+.+.. ++++.+|||||||||+|||+++.+|++|||||||+|||+.+
T Consensus 99 ~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~gLD~~~ 177 (224)
T cd03220 99 LTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFI-DLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAF 177 (224)
T ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 5676665321 11 11 123567888999997654 45678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 521 IDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 521 ~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
+..+.+.|.++ +.|||+||||++++..+||++++|++|++..
T Consensus 178 ~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 222 (224)
T cd03220 178 QEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRF 222 (224)
T ss_pred HHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999988765 4799999999999999999999999999864
No 350
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.3e-37 Score=312.43 Aligned_cols=201 Identities=22% Similarity=0.332 Sum_probs=159.1
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCC--CCCCcEEEEcCc------------ee
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDL--VPLDGMVRRHNH------------LR 431 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~--~p~~G~i~~~~~------------~~ 431 (582)
+|+++|+++.|++ +++|+|+||+|.+|++++|+||||||||||+++|+|++ +|++|+|.+.+. ..
T Consensus 1 ~i~~~nl~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 1 MLSIKDLHVSVED-KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred CeEEEEEEEEeCC-eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 4789999999974 57999999999999999999999999999999999995 699999987652 13
Q ss_pred EEEechhhhhhcCCcccHHHHHH---h---cCCC----C---hHHHHHHHHHhcCCCCccccCCCC-CCChhHHHHHHHH
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMI---K---EYPG----N---EEEKMRAAIGRFGLTGKAQVMPMK-NLSDGQRSRVVFA 497 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~---~---~~~~----~---~~~~~~~~l~~~gl~~~~~~~~~~-~LSgGqkqrv~lA 497 (582)
++|++|.... ....+...+.. . .+.. . ..+.+.++++.+++.......++. +|||||||||+||
T Consensus 80 i~~~~q~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~la 157 (248)
T PRK09580 80 IFMAFQYPVE--IPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDIL 157 (248)
T ss_pred eEEEecCchh--ccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHHH
Confidence 7777776431 11112211111 0 0000 0 134567788999996433344554 7999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhh-cCEEEEEeCCeEEEEcCCHHHH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQV-AHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~-~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
||++.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+ ||+|++|++|+++ +.|+++..
T Consensus 158 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~-~~g~~~~~ 233 (248)
T PRK09580 158 QMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIV-KSGDFTLV 233 (248)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEE-EeCCHHHH
Confidence 9999999999999999999999999999987664 57999999999999887 8999999999996 58888754
No 351
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-38 Score=313.84 Aligned_cols=203 Identities=20% Similarity=0.262 Sum_probs=166.2
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc----------
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH---------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~---------- 429 (582)
++|+++|+++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+.+.
T Consensus 2 ~~l~~~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 2 NKFNIENLDLFYGE-NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred CeEEEeccEEEECC-eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 36899999999964 6799999999999999999999999999999999999986 5999987542
Q ss_pred --eeEEEechhhhhhcCCcccHHHHHHhc--CCC---C--hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHHH
Q 007982 430 --LRIAQFHQHLAEKLDMDMSALQYMIKE--YPG---N--EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 430 --~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~---~--~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~lA 497 (582)
..++|++|... +. ..++.+++... ... . ..+++.++++.+++... ..+.++.+|||||+|||+||
T Consensus 81 ~~~~i~~~~q~~~--~~-~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 157 (249)
T PRK14253 81 LRIKVGMVFQKPN--PF-PMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIA 157 (249)
T ss_pred HHhheeEEecCCC--cC-cccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHH
Confidence 23778888743 22 25777666421 111 1 12356677888887531 22456789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||+.+|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|++. ..|+.+++..
T Consensus 158 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~~ 233 (249)
T PRK14253 158 RTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELV-EHDDTQVIFS 233 (249)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHc
Confidence 9999999999999999999999999999999876 469999999999999999999999999997 4788877643
No 352
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.7e-38 Score=334.83 Aligned_cols=209 Identities=23% Similarity=0.342 Sum_probs=178.7
Q ss_pred CeEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCC----CcEEEEcCc--------
Q 007982 365 PVLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPL----DGMVRRHNH-------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~----~G~i~~~~~-------- 429 (582)
++|+++|+++.|... ..+++||||+|.+||++||||.|||||||+++.|.|++++. +|+|.+++.
T Consensus 4 ~lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~ 83 (539)
T COG1123 4 PLLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSER 83 (539)
T ss_pred ceEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHH
Confidence 589999999999632 25899999999999999999999999999999999999987 799987653
Q ss_pred -------eeEEEechhhhhhcCCcccHHHHHHh----cCC---CChHHHHHHHHHhcCCCCcccc-CCCCCCChhHHHHH
Q 007982 430 -------LRIAQFHQHLAEKLDMDMSALQYMIK----EYP---GNEEEKMRAAIGRFGLTGKAQV-MPMKNLSDGQRSRV 494 (582)
Q Consensus 430 -------~~~~~~~q~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~l~~~gl~~~~~~-~~~~~LSgGqkqrv 494 (582)
..+++++|.+...+++-.++-..+.. ... ....+++.++|+.+||++.... +.+++|||||||||
T Consensus 84 ~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~~~yPheLSGG~rQRv 163 (539)
T COG1123 84 EMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERRDRYPHQLSGGMRQRV 163 (539)
T ss_pred HHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhhccCCcccCchHHHHH
Confidence 35899999987778776666554432 121 1134568899999999876553 34589999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 495 VFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 495 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
+||+||+.+|+|||+||||.+||+.+...|.++|+++ +.++|+||||+..+.++||||+||++|++++ .|+.+++
T Consensus 164 ~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE-~G~~~~i 242 (539)
T COG1123 164 MIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE-TGPTEEI 242 (539)
T ss_pred HHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE-ecCHHHH
Confidence 9999999999999999999999999999999998765 6799999999999999999999999999987 8999988
Q ss_pred HHHH
Q 007982 571 KLHL 574 (582)
Q Consensus 571 ~~~~ 574 (582)
....
T Consensus 243 ~~~p 246 (539)
T COG1123 243 LSNP 246 (539)
T ss_pred Hhcc
Confidence 7643
No 353
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-38 Score=319.52 Aligned_cols=207 Identities=24% Similarity=0.371 Sum_probs=159.9
Q ss_pred ceEEeeeEEEECC---eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHH
Q 007982 72 DIRIESLSVTFHG---HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~---~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~ 145 (582)
+|+++|++++|++ +.+|+|+||+|++|++++|+|+||||||||+++|+|+.+|+.|.+. +++... .....
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~i~~~~~~~~ 79 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQII----IDGDLLTEENVWDI 79 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE----ECCEECCcCcHHHH
Confidence 6999999999963 4699999999999999999999999999999999999988766432 222111 11111
Q ss_pred HHHhcc--ccC----CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 146 AEILGA--QED----GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 146 ~~~~~~--~~~----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
...+++ +.+ ......+++..... ..+......++.++++.+|+.+ ..++++.+|||||||||+|||||+.+
T Consensus 80 ~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~LSgGq~qrv~lAral~~~ 158 (279)
T PRK13650 80 RHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQD-FKEREPARLSGGQKQRVAIAGAVAMR 158 (279)
T ss_pred HhhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHh-HhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 122222 221 11122333322111 2344455678899999999974 56899999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|++|||||||++||+.++..+.++|+++ +.|||+||||++++ ..||+|++|++|+++. .|+.+++.
T Consensus 159 p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~-~~~dri~~l~~G~i~~-~g~~~~~~ 228 (279)
T PRK13650 159 PKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEV-ALSDRVLVMKNGQVES-TSTPRELF 228 (279)
T ss_pred CCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHH-HhCCEEEEEECCEEEE-ECCHHHHH
Confidence 9999999999999999999999988654 67999999999999 4899999999999964 57776654
No 354
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-38 Score=315.09 Aligned_cols=207 Identities=25% Similarity=0.357 Sum_probs=158.5
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAEI 148 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 148 (582)
+|+++|++++|+++.+|+++||+|++|++++|+|+||||||||+++|+|+.+++.|.+. +++... ........
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~----~~g~~~~~~~~~~~~~~ 77 (255)
T PRK11231 2 TLRTENLTVGYGTKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVF----LGDKPISMLSSRQLARR 77 (255)
T ss_pred EEEEEeEEEEECCEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEE----ECCEEhHHCCHHHHhhh
Confidence 58999999999998999999999999999999999999999999999999888765432 222111 11111112
Q ss_pred hcc--ccCC---CcchHHHHHHHH------HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 149 LGA--QEDG---GGEQLERVYERL------EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~~~l------~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
+++ +... .....+++.... ..........++.++++.+|+.. ..++++.+|||||+|||+|||||+.+
T Consensus 78 i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~laral~~~ 156 (255)
T PRK11231 78 LALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINH-LADRRLTDLSGGQRQRAFLAMVLAQD 156 (255)
T ss_pred eEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHH-HHcCCcccCCHHHHHHHHHHHHHhcC
Confidence 221 2111 112222221110 00111234556888999999964 56889999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|++|||||||++||+.++..+.++|+++ +.|||++|||++++.++||++++|++|+++ ..|+++++
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 225 (255)
T PRK11231 157 TPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVM-AQGTPEEV 225 (255)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEE-EEcCHHHh
Confidence 9999999999999999999999998764 579999999999999999999999999997 45666554
No 355
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-38 Score=316.95 Aligned_cols=207 Identities=22% Similarity=0.299 Sum_probs=158.7
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAEI 148 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 148 (582)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ........
T Consensus 11 ~l~i~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~----~~g~~~~~~~~~~~~~~ 86 (265)
T PRK10575 11 TFALRNVSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEIL----LDAQPLESWSSKAFARK 86 (265)
T ss_pred eEEEeeEEEEECCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEE----ECCEehhhCCHHHHhhh
Confidence 69999999999988999999999999999999999999999999999999888766432 222111 11111122
Q ss_pred hcc--ccCC---CcchHHHHHHHHHc------CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 149 LGA--QEDG---GGEQLERVYERLEA------LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~~~l~~------~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
+++ +... .....+++...... ........++.++++.+++.+ ..++++.+|||||||||+|||||+.+
T Consensus 87 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~laral~~~ 165 (265)
T PRK10575 87 VAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKP-LAHRLVDSLSGGERQRAWIAMLVAQD 165 (265)
T ss_pred eEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHH-HhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 322 2111 11222333211000 011233567889999999964 56889999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|+||||||||++||+.++..+.++|.++ +.|||+|||+++++..+||++++|++|+++ ..|+.+++
T Consensus 166 p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~-~~~~~~~~ 235 (265)
T PRK10575 166 SRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMI-AQGTPAEL 235 (265)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-EecCHHHh
Confidence 9999999999999999999999988654 679999999999999999999999999996 45665544
No 356
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-38 Score=317.80 Aligned_cols=203 Identities=19% Similarity=0.252 Sum_probs=165.7
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~--------- 429 (582)
.++|+++|+++.|++ ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++ |++|+|.+.+.
T Consensus 22 ~~~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 22 KVVFDTQNLNLWYGE-DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred ceEEEEeeeEEEECC-cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 568999999999964 579999999999999999999999999999999999997 69999987542
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhc---CCCCh----HHHHHHHHHhcCC----CCccccCCCCCCChhHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKE---YPGNE----EEKMRAAIGRFGL----TGKAQVMPMKNLSDGQRSRV 494 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~~~~l~~~gl----~~~~~~~~~~~LSgGqkqrv 494 (582)
..++|++|... +. ..++.+++... ..... .+.+.++++.+++ .... ..++.+|||||||||
T Consensus 101 ~~~~~~i~~v~q~~~--~~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~-~~~~~~LSgGe~qrv 176 (271)
T PRK14238 101 EELRTNVGMVFQKPN--PF-PKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRL-HDNAYGLSGGQQQRL 176 (271)
T ss_pred HHHhhhEEEEecCCc--cc-cccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHH-hcCcccCCHHHHHHH
Confidence 24788888753 22 24777766421 11111 2335666777754 2222 356789999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 495 VFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 495 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|||+|+.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++ +.|+..++..
T Consensus 177 ~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~~~ 255 (271)
T PRK14238 177 CIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVN-EYDDTDKIFS 255 (271)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHc
Confidence 9999999999999999999999999999999998876 479999999999999999999999999997 4788877643
No 357
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-38 Score=316.39 Aligned_cols=210 Identities=22% Similarity=0.316 Sum_probs=158.8
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCCceeeeeechHHHH-----
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA-----SDMSSLEAVISCDEERL----- 140 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~-----~~~~~~~~~i~~~~~~~----- 140 (582)
.+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+ ++.|. +.+++...
T Consensus 12 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~----i~~~g~~~~~~~~ 87 (260)
T PRK10744 12 SKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGE----ILLDGENILTPKQ 87 (260)
T ss_pred ceEEEEEEEEEeCCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceE----EEECCEEcccccc
Confidence 47999999999998889999999999999999999999999999999999975 23333 22222111
Q ss_pred HHHHHHHHhc--cccCC--CcchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHH
Q 007982 141 KLEKEAEILG--AQEDG--GGEQLERVYERLE---ALDASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 141 ~~~~~~~~~~--~~~~~--~~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~L 210 (582)
........++ ++... .....+++..... ..+......++.++++.+++.. ...++++.+|||||+|||+|
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~l 167 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLCI 167 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHHH
Confidence 0111112222 22211 1122333321111 1233444567889999999742 34578899999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||+.+|++|||||||++||+.++..+.+.|+++ +.|||++||+++++..+||++++|++|+++. .|+.+++.
T Consensus 168 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 243 (260)
T PRK10744 168 ARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIE-FGNTDTIF 243 (260)
T ss_pred HHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999876 4699999999999999999999999999975 46666554
No 358
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.8e-38 Score=310.76 Aligned_cols=197 Identities=25% Similarity=0.407 Sum_probs=151.4
Q ss_pred eEEeeeEEEECC----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------HH
Q 007982 73 IRIESLSVTFHG----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------KL 142 (582)
Q Consensus 73 i~v~nls~~y~~----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~~ 142 (582)
|+++|++++|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ..
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~----~~g~~~~~~~~~~~ 77 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVL----FNGQSLSKLSSNER 77 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE----ECCEEhhhcCHhHH
Confidence 789999999974 5799999999999999999999999999999999999988766432 221111 00
Q ss_pred HHHH-HHhcc--ccCC---CcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHH
Q 007982 143 EKEA-EILGA--QEDG---GGEQLERVYER--LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARAL 214 (582)
Q Consensus 143 ~~~~-~~~~~--~~~~---~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL 214 (582)
.... ..+++ +... .....+++... +..........++.++++.+|+.+ ..++++.+|||||||||+|||||
T Consensus 78 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~laral 156 (221)
T TIGR02211 78 AKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEH-RINHRPSELSGGERQRVAIARAL 156 (221)
T ss_pred HHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCHHHHHHHHHHHHH
Confidence 0111 12222 2211 11233333221 112333344567889999999974 56889999999999999999999
Q ss_pred hcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEE
Q 007982 215 FINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLK 275 (582)
Q Consensus 215 ~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~ 275 (582)
+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.. ||++++|++|+++
T Consensus 157 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~-~d~v~~l~~G~i~ 220 (221)
T TIGR02211 157 VNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKK-LDRVLEMKDGQLF 220 (221)
T ss_pred hCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhh-cCEEEEEeCCEec
Confidence 9999999999999999999999999998754 5799999999999965 8999999999874
No 359
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=8.2e-38 Score=312.84 Aligned_cols=207 Identities=23% Similarity=0.335 Sum_probs=154.7
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCCCceeeeeechHHHH---HHHHH-H
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIE--ASDMSSLEAVISCDEERL---KLEKE-A 146 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~--~~~~~~~~~~i~~~~~~~---~~~~~-~ 146 (582)
|+++||+++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+. +++.|.+ .+++... ..... .
T Consensus 1 l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i----~~~g~~~~~~~~~~~~~ 76 (243)
T TIGR01978 1 LKIKDLHVSVEDKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTI----LFKGQDLLELEPDERAR 76 (243)
T ss_pred CeEeeEEEEECCEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceE----EECCEecCCCCHHHhhc
Confidence 57899999999889999999999999999999999999999999999984 4554433 2222111 00011 1
Q ss_pred HHhc--cccCCC---cchHHHHHHHHH---c------CChhHHHHHHHHHHHhCCCChhhhhccCC-CCChhHHHHHHHH
Q 007982 147 EILG--AQEDGG---GEQLERVYERLE---A------LDASTAEKRAAEILYGLGFNKTMQAKKTR-DFSGGWRMRIALA 211 (582)
Q Consensus 147 ~~~~--~~~~~~---~~~~~~~~~~l~---~------~~~~~~~~~~~~~l~~lgl~~~~~~~~~~-~LSGGqrqRv~LA 211 (582)
..++ ++.... ....+.+..... . .+......++.++++.+|+.....++++. +|||||||||+||
T Consensus 77 ~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl~la 156 (243)
T TIGR01978 77 AGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVNEGFSGGEKKRNEIL 156 (243)
T ss_pred cceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccccCcCHHHHHHHHHH
Confidence 1122 122111 112222211111 0 12223346788999999997445567776 5999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhh-cCeEEEEeCCeEEEEcCChhHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGV-CTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~-~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+ ||++++|++|+++ +.|+++++
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 232 (243)
T TIGR01978 157 QMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIV-KSGDVELA 232 (243)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEE-EecCHHHh
Confidence 9999999999999999999999999999999876 57999999999999998 8999999999996 45666543
No 360
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.8e-38 Score=346.50 Aligned_cols=201 Identities=22% Similarity=0.298 Sum_probs=166.4
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
+|+++|+++.|++ ..+|+|+||+|.+|++++|+||||||||||+|+|+|+++|++|+|...+. ..+++
T Consensus 3 ~l~~~~l~~~~~~-~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~ 81 (490)
T PRK10938 3 SLQISQGTFRLSD-TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSD 81 (490)
T ss_pred eEEEEeEEEEcCC-eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhce
Confidence 6899999999964 56999999999999999999999999999999999999999999986442 12567
Q ss_pred echhhhhhc-C-----CcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 007982 435 FHQHLAEKL-D-----MDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLL 508 (582)
Q Consensus 435 ~~q~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 508 (582)
++|.....+ . ...++.+++.. .....+++.++++.+|+.+.. ++++.+|||||||||+|||||+.+|++||
T Consensus 82 ~~q~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~~p~lll 158 (490)
T PRK10938 82 EWQRNNTDMLSPGEDDTGRTTAEIIQD--EVKDPARCEQLAQQFGITALL-DRRFKYLSTGETRKTLLCQALMSEPDLLI 158 (490)
T ss_pred eccCcchhhcccchhhccccHHHhccc--chhHHHHHHHHHHHcCCHhhh-hCCcccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 777542111 0 12344444321 112345688899999997654 46779999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 509 LDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 509 LDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|||||+|||+.++..+.+.|.++ +.|||+||||++++.++||+|++|++|+++ +.|+++++.
T Consensus 159 LDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~ 223 (490)
T PRK10938 159 LDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLA-ETGEREEIL 223 (490)
T ss_pred EcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEE-EeCCHHHHh
Confidence 99999999999999999999876 579999999999999999999999999996 578887654
No 361
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=6e-38 Score=304.84 Aligned_cols=185 Identities=27% Similarity=0.391 Sum_probs=157.4
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEec
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQFH 436 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~~ 436 (582)
|+++|+++.|++ +.+|+++||+|.+|+++||+|+||||||||+++|+|+++|++|+|.+.+. ..++|++
T Consensus 1 l~i~~l~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (201)
T cd03231 1 LEADELTCERDG-RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQRDSIARGLLYLG 79 (201)
T ss_pred CEEEEEEEEeCC-ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccccHHhhhheEEec
Confidence 478999999964 67999999999999999999999999999999999999999999986542 1467777
Q ss_pred hhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCC
Q 007982 437 QHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHL 516 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~L 516 (582)
|... +....++.+++.........+++.++++.+|+.+.. ++++.+||||||||++||||++.+|++|||||||+||
T Consensus 80 q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~laral~~~p~llllDEPt~~L 156 (201)
T cd03231 80 HAPG--IKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFE-DRPVAQLSAGQQRRVALARLLLSGRPLWILDEPTTAL 156 (201)
T ss_pred cccc--cCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhh-cCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 7642 334567777764322222456788999999998654 4567899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEE
Q 007982 517 DIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVC 555 (582)
Q Consensus 517 D~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l 555 (582)
|+.++..+.+.|.++ +.|+|+||||......+|++++++
T Consensus 157 D~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 157 DKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 999999999999765 679999999999999999999876
No 362
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=314.18 Aligned_cols=203 Identities=22% Similarity=0.286 Sum_probs=166.0
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCC-----CcEEEEcCc----------
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPL-----DGMVRRHNH---------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~-----~G~i~~~~~---------- 429 (582)
++|+++|+++.|++ ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++|+ +|+|.+.+.
T Consensus 6 ~~l~~~nl~~~~~~-~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~ 84 (261)
T PRK14258 6 PAIKVNNLSFYYDT-QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLN 84 (261)
T ss_pred ceEEEeeEEEEeCC-eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchH
Confidence 47999999999964 57999999999999999999999999999999999999985 788865431
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc-----C-CCCh-HHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE-----Y-PGNE-EEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~-~~~~-~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|... +.. .++.+++... . +..+ .+.+.++++.+++... ...+++.+|||||+|||+|
T Consensus 85 ~~~~~i~~~~q~~~--l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~l 161 (261)
T PRK14258 85 RLRRQVSMVHPKPN--LFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLCI 161 (261)
T ss_pred HhhccEEEEecCCc--cCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHH
Confidence 13677777643 222 5777666421 1 1111 3456788899987431 2345678999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeC-----CeEEEEcCCH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCEN-----QAVTRWEGDI 567 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~-----G~i~~~~g~~ 567 (582)
||+|+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.++||+|++|++ |+++ ..|++
T Consensus 162 aral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~-~~~~~ 240 (261)
T PRK14258 162 ARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV-EFGLT 240 (261)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE-EeCCH
Confidence 99999999999999999999999999999988763 67999999999999999999999999 9996 57888
Q ss_pred HHHHH
Q 007982 568 MDFKL 572 (582)
Q Consensus 568 ~~~~~ 572 (582)
+++.+
T Consensus 241 ~~~~~ 245 (261)
T PRK14258 241 KKIFN 245 (261)
T ss_pred HHHHh
Confidence 88754
No 363
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=4.8e-38 Score=313.16 Aligned_cols=180 Identities=28% Similarity=0.414 Sum_probs=148.8
Q ss_pred ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEechhhhhhcCCcccH
Q 007982 380 NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQFHQHLAEKLDMDMSA 449 (582)
Q Consensus 380 ~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~~q~~~~~~~~~~~~ 449 (582)
+++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++|.. ..+....++
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~-~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRRKKFLRRIGVVFGQK-TQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccchhhcccEEEEcCCc-cccCCCCcH
Confidence 57999999999999999999999999999999999999999999987543 1467765321 123344566
Q ss_pred HHHHHh--c-CC--CC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHH
Q 007982 450 LQYMIK--E-YP--GN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDS 523 (582)
Q Consensus 450 ~~~~~~--~-~~--~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~ 523 (582)
.+++.. . .. .. ..+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|++|||||||++||+.++..
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~ 191 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELL-DTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQEN 191 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-cCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHH
Confidence 665421 1 11 11 234567889999997654 45678999999999999999999999999999999999999999
Q ss_pred HHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEE
Q 007982 524 LAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVT 561 (582)
Q Consensus 524 l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 561 (582)
+.+.|.++ +.|||+||||++++..+||++++|++|++.
T Consensus 192 l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 233 (236)
T cd03267 192 IRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLL 233 (236)
T ss_pred HHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEE
Confidence 99999875 469999999999999999999999999986
No 364
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-38 Score=319.25 Aligned_cols=209 Identities=22% Similarity=0.324 Sum_probs=162.2
Q ss_pred ceEEeeeEEEEC-CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHH
Q 007982 72 DIRIESLSVTFH-GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAE 147 (582)
Q Consensus 72 ~i~v~nls~~y~-~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~ 147 (582)
+|+++|++++|+ +..+|+|+||+|++||+++|+|+||||||||+++|+|+.+|+.|.+. +++... .......
T Consensus 3 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~~~~~~~~~~~~ 78 (277)
T PRK13652 3 LIETRDLCYSYSGSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVL----IRGEPITKENIREVRK 78 (277)
T ss_pred eEEEEEEEEEeCCCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEE----ECCEECCcCCHHHHHh
Confidence 689999999996 46799999999999999999999999999999999999888766432 221110 1111112
Q ss_pred Hhc--cccC----CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCC
Q 007982 148 ILG--AQED----GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPT 219 (582)
Q Consensus 148 ~~~--~~~~----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~ 219 (582)
.++ ++.. ......+++..... ..+......++.++++.+|+.+ ..++.+.+||||||||++|||||+.+|+
T Consensus 79 ~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~Gq~qrl~laraL~~~p~ 157 (277)
T PRK13652 79 FVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEE-LRDRVPHHLSGGEKKRVAIAGVIAMEPQ 157 (277)
T ss_pred heEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-HhcCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 222 2221 11122333321111 2344445567899999999974 5688999999999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 220 ILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 220 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
+|||||||++||+.++..+.++|+++ +.|||++|||++++..+||++++|++|+++ +.|+++++..
T Consensus 158 llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~-~~g~~~~~~~ 227 (277)
T PRK13652 158 VLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIV-AYGTVEEIFL 227 (277)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEE-EECCHHHHhc
Confidence 99999999999999999999988754 679999999999999999999999999997 4577777653
No 365
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=7e-38 Score=315.14 Aligned_cols=211 Identities=23% Similarity=0.369 Sum_probs=160.0
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechH-----------HHH
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDE-----------ERL 140 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~-----------~~~ 140 (582)
|+++||++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+... ..+.. ...
T Consensus 1 i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~ 80 (252)
T TIGR03005 1 VRFSDVTKRFGILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEK 80 (252)
T ss_pred CEEEEEEEEeCCeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchh
Confidence 578999999998899999999999999999999999999999999999998876643210 01100 000
Q ss_pred HHHHHHHHhcc--ccCC---CcchHHHHHHH-H--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHH
Q 007982 141 KLEKEAEILGA--QEDG---GGEQLERVYER-L--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALAR 212 (582)
Q Consensus 141 ~~~~~~~~~~~--~~~~---~~~~~~~~~~~-l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAr 212 (582)
........+++ +... .....+++... . ...........+.++++.+|+.+ ..++.+.+|||||+|||+|||
T Consensus 81 ~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G~~qrv~lar 159 (252)
T TIGR03005 81 HLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLAD-KADHMPAQLSGGQQQRVAIAR 159 (252)
T ss_pred HHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-HhhcChhhcCHHHHHHHHHHH
Confidence 00111122221 2111 12233333221 1 12233445567889999999974 568899999999999999999
Q ss_pred HHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 213 ALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 213 aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||+.+|++|||||||++||+.++..+.++|+++ +.|+|+||||++++..+||++++|++|+++ ..|+++++.
T Consensus 160 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 235 (252)
T TIGR03005 160 ALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV-EQGKPDEIF 235 (252)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE-EeCCHHHHh
Confidence 999999999999999999999999999988754 679999999999999999999999999997 457766654
No 366
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-38 Score=314.73 Aligned_cols=208 Identities=19% Similarity=0.271 Sum_probs=158.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHH-HH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKE-AE 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~-~~ 147 (582)
+|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ..... ..
T Consensus 5 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~----~~g~~~~~~~~~~~~~~ 80 (255)
T PRK11300 5 LLSVSGLMMRFGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTIL----LRGQHIEGLPGHQIARM 80 (255)
T ss_pred eEEEeeEEEEECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEE----ECCEECCCCCHHHHHhc
Confidence 69999999999999999999999999999999999999999999999999888766432 211110 00011 11
Q ss_pred Hhc--cccCC---CcchHHHHHHHHH---------c------CC--hhHHHHHHHHHHHhCCCChhhhhccCCCCChhHH
Q 007982 148 ILG--AQEDG---GGEQLERVYERLE---------A------LD--ASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWR 205 (582)
Q Consensus 148 ~~~--~~~~~---~~~~~~~~~~~l~---------~------~~--~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqr 205 (582)
.+. ++... .....+++..... . .. ......++.++++.+|+.. ..++++.+||||||
T Consensus 81 ~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G~~ 159 (255)
T PRK11300 81 GVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLE-HANRQAGNLAYGQQ 159 (255)
T ss_pred CeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhh-hhhCChhhCCHHHH
Confidence 122 22211 1122333321100 0 00 0123356788899999964 57899999999999
Q ss_pred HHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCCh
Q 007982 206 MRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNF 281 (582)
Q Consensus 206 qRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 281 (582)
|||+|||||+.+|++|||||||++||+.++..+.++|.++ +.|||++||+++++..+||++++|++|+++ +.|+.
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~-~~~~~ 238 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPL-ANGTP 238 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEE-ecCCH
Confidence 9999999999999999999999999999999999998754 679999999999999999999999999997 45666
Q ss_pred hHHH
Q 007982 282 DQYV 285 (582)
Q Consensus 282 ~~~~ 285 (582)
+++.
T Consensus 239 ~~~~ 242 (255)
T PRK11300 239 EEIR 242 (255)
T ss_pred HHHh
Confidence 6543
No 367
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=9.1e-38 Score=308.07 Aligned_cols=194 Identities=25% Similarity=0.354 Sum_probs=159.7
Q ss_pred EEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 367 LQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 367 l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
|+++|++++|++. +++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 3 l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 82 (221)
T cd03244 3 IEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRISI 82 (221)
T ss_pred EEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEEE
Confidence 6899999999743 47999999999999999999999999999999999999999999987652 24788
Q ss_pred echhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccc----------cCCCCCCChhHHHHHHHHHHHccCC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQ----------VMPMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~~~~LSgGqkqrv~lAral~~~p 504 (582)
++|... + +..++.+++.. +......++.++++.+++.+... ..++..|||||+|||+|||+|+.+|
T Consensus 83 ~~q~~~--l-~~~tv~enl~~-~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 83 IPQDPV--L-FSGTIRSNLDP-FGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred ECCCCc--c-ccchHHHHhCc-CCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 888753 2 23477776642 11223445666677777654321 2356899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCC
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGD 566 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~ 566 (582)
++|||||||++||+.++..+.+.|+++ +.|||++|||++++.. ||++++|++|++.. .|+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~-~d~i~~l~~g~~~~-~~~ 220 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIID-SDRILVLDKGRVVE-FDS 220 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-CCEEEEEECCeEEe-cCC
Confidence 999999999999999999999999875 4689999999999975 99999999999964 443
No 368
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=317.60 Aligned_cols=209 Identities=23% Similarity=0.325 Sum_probs=161.4
Q ss_pred ceEEeeeEEEEC-CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-----HHHHH
Q 007982 72 DIRIESLSVTFH-GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-----KLEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~-~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-----~~~~~ 145 (582)
+|+++||+++|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|+.+++.|.+. +++... .....
T Consensus 1 ~l~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~----~~g~~~~~~~~~~~~~ 76 (275)
T PRK13639 1 ILETRDLKYSYPDGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVL----IKGEPIKYDKKSLLEV 76 (275)
T ss_pred CEEEEEEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEE----ECCEECccccchHHHH
Confidence 478999999997 46799999999999999999999999999999999999988766432 222111 11111
Q ss_pred HHHhc--cccC----CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 146 AEILG--AQED----GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 146 ~~~~~--~~~~----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
...++ ++.. ......+++..... .........++.++++.+|+.+ ..++++.+|||||+||++|||||+.+
T Consensus 77 ~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~LS~Gq~qrv~laral~~~ 155 (275)
T PRK13639 77 RKTVGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEG-FENKPPHHLSGGQKKRVAIAGILAMK 155 (275)
T ss_pred HhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCch-hhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 22232 2221 11122333321111 1233344567889999999974 56889999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
|++|||||||++||+.++.++.++|+++ +.|||++|||++++..+||++++|++|+++. .|+++++..
T Consensus 156 p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~~ 226 (275)
T PRK13639 156 PEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIK-EGTPKEVFS 226 (275)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHhc
Confidence 9999999999999999999999999865 5799999999999999999999999999974 577776543
No 369
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.1e-37 Score=307.44 Aligned_cols=191 Identities=27% Similarity=0.388 Sum_probs=159.0
Q ss_pred eEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-------------
Q 007982 366 VLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------- 429 (582)
+|+++|+++.|+++ +.+|+|+||++.+|++++|+||||||||||+++|+|+++|++|+|...+.
T Consensus 1 ~l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (220)
T TIGR02982 1 VISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQL 80 (220)
T ss_pred CEEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHH
Confidence 47899999999642 57999999999999999999999999999999999999999999987542
Q ss_pred -eeEEEechhhhhhcCCcccHHHHHHhc---CCC-C---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc
Q 007982 430 -LRIAQFHQHLAEKLDMDMSALQYMIKE---YPG-N---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 430 -~~~~~~~q~~~~~~~~~~~~~~~~~~~---~~~-~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
..++|++|+.. +....++.+++... ... . ....+.++++.+|+.+... .++.+||+||+||++|||+|+
T Consensus 81 ~~~i~~~~q~~~--~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~lS~G~~qrv~laral~ 157 (220)
T TIGR02982 81 RRNIGYIFQAHN--LLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLD-YYPHNLSGGQKQRVAIARALV 157 (220)
T ss_pred HhheEEEcCChh--hcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhh-cChhhCCHHHHHHHHHHHHHh
Confidence 24788888753 33345676655321 111 1 2345788999999976554 456899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeE
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAV 560 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i 560 (582)
.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++.+ .+||+|++|++|++
T Consensus 158 ~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~-~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 158 HRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRIL-DVADRIVHMEDGKL 219 (220)
T ss_pred cCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHH-hhCCEEEEEECCEE
Confidence 999999999999999999999999888764 57999999999965 79999999999986
No 370
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=7.7e-38 Score=310.53 Aligned_cols=190 Identities=23% Similarity=0.339 Sum_probs=156.2
Q ss_pred eeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC----CCcEEEEcCc---------eeEEEechhhhhhcCCccc
Q 007982 382 IYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP----LDGMVRRHNH---------LRIAQFHQHLAEKLDMDMS 448 (582)
Q Consensus 382 ~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p----~~G~i~~~~~---------~~~~~~~q~~~~~~~~~~~ 448 (582)
+++|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+.+. ..++|++|.....+....+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 47899999999999999999999999999999999999 8999987652 2588898885323333455
Q ss_pred HHHHHHhc---C--CC-ChHHHHHHHHHhcCCCC--ccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHH
Q 007982 449 ALQYMIKE---Y--PG-NEEEKMRAAIGRFGLTG--KAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIET 520 (582)
Q Consensus 449 ~~~~~~~~---~--~~-~~~~~~~~~l~~~gl~~--~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~ 520 (582)
+.+++... . .. ...+++.++++.+|+.+ ...+.++.+|||||||||+||||++.+|+||||||||+|||+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~ 160 (230)
T TIGR02770 81 MGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVN 160 (230)
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHH
Confidence 55543211 1 11 12345788999999973 22345678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 521 IDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 521 ~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+..+.+.|.++ +.|||++|||++++..+||++++|++|++. ..|+.+++..
T Consensus 161 ~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~~ 215 (230)
T TIGR02770 161 QARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIV-ERGTVKEIFY 215 (230)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 99999888764 569999999999999999999999999996 5788887753
No 371
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-38 Score=344.75 Aligned_cols=194 Identities=27% Similarity=0.351 Sum_probs=166.1
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~ 432 (582)
|+|+++|++++|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+.+. ..+
T Consensus 3 ~~l~~~~l~~~~~~-~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 3 PYLSFDGIGKTFPG-VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred ceEEEeeeEEEECC-EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 68999999999964 67999999999999999999999999999999999999999999987542 248
Q ss_pred EEechhhhhhcCCcccHHHHHHhcC----CC-----ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccC
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEY----PG-----NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~ 503 (582)
+|++|... +....++.+++.... .. ...+++.++++.+|+.... ++++.+|||||||||+|||||+.+
T Consensus 82 ~~v~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGq~qrv~laral~~~ 158 (501)
T PRK11288 82 AIIYQELH--LVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDP-DTPLKYLSIGQRQMVEIAKALARN 158 (501)
T ss_pred EEEEechh--ccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCc-CCchhhCCHHHHHHHHHHHHHHhC
Confidence 89998753 344567777765321 01 1134678899999997544 456789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++.
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~ 220 (501)
T PRK11288 159 ARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVA 220 (501)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999988765 5799999999999999999999999999864
No 372
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=332.30 Aligned_cols=206 Identities=22% Similarity=0.287 Sum_probs=167.7
Q ss_pred CCCeEEEEEEEEEecCC--ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhh
Q 007982 363 PPPVLQFVEVTFGYTPD--NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLA 440 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~--~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~ 440 (582)
..++++++|+++.|++. +++|+|+||+|.+|+++||+||||||||||+++|+|+++|++|+|...+... +..+..
T Consensus 18 ~~~mL~lknL~~~~~~~~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P~sGeI~I~G~~~--~i~~~~- 94 (549)
T PRK13545 18 NKPFDKLKDLFFRSKDGEYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMPNKGTVDIKGSAA--LIAISS- 94 (549)
T ss_pred ccceeEEEEEEEecCCCccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCCCceEEEECCEee--eEEecc-
Confidence 35789999999999753 4699999999999999999999999999999999999999999999876431 111111
Q ss_pred hhcCCcccHHHHHHhc--CCCC----hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCC
Q 007982 441 EKLDMDMSALQYMIKE--YPGN----EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTN 514 (582)
Q Consensus 441 ~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~ 514 (582)
.+....++.+++... +... ..+.+.++++.+++.... ++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 95 -~l~~~lTV~EnL~l~~~~~~~~~~e~~e~i~elLe~lgL~~~l-d~~~~~LSGGQrQRVaLArAL~~~P~LLLLDEPTs 172 (549)
T PRK13545 95 -GLNGQLTGIENIELKGLMMGLTKEKIKEIIPEIIEFADIGKFI-YQPVKTYSSGMKSRLGFAISVHINPDILVIDEALS 172 (549)
T ss_pred -ccCCCCcHHHHHHhhhhhcCCCHHHHHHHHHHHHHHcCChhHh-hCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcc
Confidence 122345676665321 1111 123466789999997654 45678999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHH
Q 007982 515 HLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHL 574 (582)
Q Consensus 515 ~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~ 574 (582)
|||+.++..+.+.|.++ +.|||+||||++++.++||++++|++|++. +.|+++++....
T Consensus 173 gLD~~sr~~LlelL~el~~~G~TIIIVSHdl~~i~~l~DrIivL~~GkIv-~~G~~~el~~~~ 234 (549)
T PRK13545 173 VGDQTFTKKCLDKMNEFKEQGKTIFFISHSLSQVKSFCTKALWLHYGQVK-EYGDIKEVVDHY 234 (549)
T ss_pred cCCHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EECCHHHHHhhH
Confidence 99999999999998765 579999999999999999999999999997 478887766543
No 373
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-38 Score=314.71 Aligned_cols=210 Identities=23% Similarity=0.308 Sum_probs=159.0
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCC-----CCceeeeeechHHHH-----
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASD-----MSSLEAVISCDEERL----- 140 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~-----~~~~~~~i~~~~~~~----- 140 (582)
.+|+++||++.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+.+++ .|. +.+++...
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~----i~~~g~~i~~~~~ 78 (253)
T PRK14267 3 FAIETVNLRVYYGSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGE----VRLFGRNIYSPDV 78 (253)
T ss_pred ceEEEEeEEEEeCCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceE----EEECCEEcccccc
Confidence 3699999999999889999999999999999999999999999999999998763 333 22222111
Q ss_pred HHHHHHHHhcc--ccCC---CcchHHHHHHHH--HcC--ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHH
Q 007982 141 KLEKEAEILGA--QEDG---GGEQLERVYERL--EAL--DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRI 208 (582)
Q Consensus 141 ~~~~~~~~~~~--~~~~---~~~~~~~~~~~l--~~~--~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv 208 (582)
........+++ +... .....+++.... ... .......++.++++.+|+.. ...++++.+|||||||||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14267 79 DPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLNDYPSNLSGGQRQRL 158 (253)
T ss_pred ChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhccChhhCCHHHHHHH
Confidence 00111112222 2211 112333332211 111 22344556888999998742 235788999999999999
Q ss_pred HHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 209 ALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 209 ~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||++|||++++..+||+|++|++|+++. .|+.+++.
T Consensus 159 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 236 (253)
T PRK14267 159 VIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIE-VGPTRKVF 236 (253)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999999876 4799999999999999999999999999974 56665543
No 374
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-38 Score=308.63 Aligned_cols=187 Identities=24% Similarity=0.359 Sum_probs=160.4
Q ss_pred eeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------------eeEEEechhhhhhcCCc
Q 007982 382 IYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------------LRIAQFHQHLAEKLDMD 446 (582)
Q Consensus 382 ~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------------~~~~~~~q~~~~~~~~~ 446 (582)
-++|+||+|+.||+..|+|-||||||||+|+|.++++|++|+|...+. .+++.++|.|. +.+.
T Consensus 43 Gv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa--LlPh 120 (386)
T COG4175 43 GVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA--LLPH 120 (386)
T ss_pred eeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc--cccc
Confidence 468999999999999999999999999999999999999999987653 25788899886 5677
Q ss_pred ccHHHHHHhcC-----CCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHH
Q 007982 447 MSALQYMIKEY-----PGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIET 520 (582)
Q Consensus 447 ~~~~~~~~~~~-----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~ 520 (582)
.|++++..... ++. .++++.++|+.+||.++..++| .+||||+||||.|||||+.+|+|||+|||+|+|||--
T Consensus 121 rtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp-~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLI 199 (386)
T COG4175 121 RTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP-NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLI 199 (386)
T ss_pred hhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc-ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHH
Confidence 88888875432 222 3457899999999998876655 8999999999999999999999999999999999977
Q ss_pred HHHHHHHH----HhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 521 IDSLAEAL----NEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 521 ~~~l~~~l----~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+..+.+.| .++++|||+||||++++.++.|||.+|++|+|+. -|++++...
T Consensus 200 R~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~ivQ-~Gtp~eIl~ 254 (386)
T COG4175 200 RTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEIVQ-VGTPEEILL 254 (386)
T ss_pred HHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeEEE-eCCHHHHHc
Confidence 66665554 4568999999999999999999999999999975 787776543
No 375
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=313.94 Aligned_cols=213 Identities=18% Similarity=0.291 Sum_probs=159.1
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCC-ceeeeeechHHHH-----HHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMS-SLEAVISCDEERL-----KLEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~-~~~~~i~~~~~~~-----~~~~~ 145 (582)
+|+++|++++|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+.+++.+ ...|.+.+++... .....
T Consensus 7 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 86 (254)
T PRK14273 7 IIETENLNLFYTDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILEL 86 (254)
T ss_pred eEEEeeeEEEeCCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHH
Confidence 79999999999988899999999999999999999999999999999999876310 0022232222111 01111
Q ss_pred HHHhcc--ccCC--CcchHHHHHHHHH--c-CChhHHHHHHHHHHHhCCCC---hhhhhccCCCCChhHHHHHHHHHHHh
Q 007982 146 AEILGA--QEDG--GGEQLERVYERLE--A-LDASTAEKRAAEILYGLGFN---KTMQAKKTRDFSGGWRMRIALARALF 215 (582)
Q Consensus 146 ~~~~~~--~~~~--~~~~~~~~~~~l~--~-~~~~~~~~~~~~~l~~lgl~---~~~~~~~~~~LSGGqrqRv~LAraL~ 215 (582)
...+++ +... .....+++..... . ......+.++.++++.+++. ....++++.+|||||||||+|||||+
T Consensus 87 ~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgG~~qrv~laral~ 166 (254)
T PRK14273 87 RRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNTNALSLSGGQQQRLCIARTLA 166 (254)
T ss_pred hhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhCCcccCCHHHHHHHHHHHHHH
Confidence 122322 2211 1233333322211 1 12234456788889999873 13457889999999999999999999
Q ss_pred cCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 216 INPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 216 ~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 167 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 237 (254)
T PRK14273 167 IEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEE-ESSTDELF 237 (254)
T ss_pred cCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 999999999999999999999999999876 4799999999999999999999999999974 56665543
No 376
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=6e-38 Score=345.75 Aligned_cols=201 Identities=23% Similarity=0.335 Sum_probs=168.0
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC--CCcEEEEcCc------------ee
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP--LDGMVRRHNH------------LR 431 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p--~~G~i~~~~~------------~~ 431 (582)
+|+++|++++|++ +++|+|+||+|.+|++++|+||||||||||+++|+|+++| ++|+|.+.+. ..
T Consensus 1 ~l~i~~l~~~~~~-~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 1 LLEMKGIVKTFGG-VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred CEEEEeEEEEeCC-eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 4789999999964 6799999999999999999999999999999999999987 7999987652 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcC--C--C------ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEY--P--G------NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~--~--~------~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
++|++|... +....++.+++.... . . ...+++.++++.+|+.....++++.+|||||||||+|||||+
T Consensus 80 i~~v~q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~al~ 157 (500)
T TIGR02633 80 IVIIHQELT--LVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAKALN 157 (500)
T ss_pred EEEEeeccc--cCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHHHHh
Confidence 889999753 344567777664321 0 0 113457889999999765444667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
.+|++|||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++. .|+..++
T Consensus 158 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 228 (500)
T TIGR02633 158 KQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVA-TKDMSTM 228 (500)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEee-ecCcccC
Confidence 999999999999999999999999988764 5799999999999999999999999999964 5655443
No 377
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-38 Score=311.19 Aligned_cols=208 Identities=17% Similarity=0.224 Sum_probs=156.7
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHH-HHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEK-EAE 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~-~~~ 147 (582)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+.+++.|.+. +++... .... ...
T Consensus 5 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~----~~g~~~~~~~~~~~~~~ 80 (237)
T PRK11614 5 MLSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIV----FDGKDITDWQTAKIMRE 80 (237)
T ss_pred EEEEEeEEEeeCCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEE----ECCEecCCCCHHHHHHh
Confidence 69999999999988999999999999999999999999999999999999988766432 222111 0000 111
Q ss_pred Hhcc--ccCC---CcchHHHHHHHHHcCChhHHHHHHHHHHHhC-CCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 148 ILGA--QEDG---GGEQLERVYERLEALDASTAEKRAAEILYGL-GFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 148 ~~~~--~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l-gl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
.+++ +... .....+++...............+.++++.+ ++.+ ..++++.+|||||||||+|||||+.+|++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~~~~LS~G~~qrl~la~al~~~p~il 159 (237)
T PRK11614 81 AVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHE-RRIQRAGTMSGGEQQMLAIGRALMSQPRLL 159 (237)
T ss_pred CEEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHH-HHhCchhhCCHHHHHHHHHHHHHHhCCCEE
Confidence 2222 1111 1122333321111112223345567777877 4653 456789999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 222 LLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||||++||+.++..+.+.|+++ +.|||++|||++++..+||++++|++|+++ +.|++++..
T Consensus 160 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 225 (237)
T PRK11614 160 LLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVV-LEDTGDALL 225 (237)
T ss_pred EEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEE-eeCCHHHHh
Confidence 999999999999999999998754 679999999999999999999999999996 457766553
No 378
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=6.2e-38 Score=305.85 Aligned_cols=182 Identities=24% Similarity=0.368 Sum_probs=151.7
Q ss_pred EEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------------eeEE
Q 007982 369 FVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------------LRIA 433 (582)
Q Consensus 369 ~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------------~~~~ 433 (582)
++|+++.|++ +++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++
T Consensus 1 i~~l~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~ 79 (206)
T TIGR03608 1 LKNISKKFGD-KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKLG 79 (206)
T ss_pred CcceEEEECC-EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCee
Confidence 4689999964 67999999999999999999999999999999999999999999977542 1477
Q ss_pred EechhhhhhcCCcccHHHHHHhc--C---CC-ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKE--Y---PG-NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~--~---~~-~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
|++|... +....++.+++... . .. ...+++.++++.+|+..... +++.+|||||+||++|||||+.+|++|
T Consensus 80 ~~~q~~~--~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~lS~G~~qr~~laral~~~p~ll 156 (206)
T TIGR03608 80 YLFQNFA--LIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLK-QKIYELSGGEQQRVALARAILKDPPLI 156 (206)
T ss_pred EEecchh--hccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhc-CChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 8887743 33446777665421 1 11 12456788999999976544 566899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEE
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVC 555 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l 555 (582)
||||||+|||+.++..+.+.|+++ +.|||+||||++++ .+||++++|
T Consensus 157 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~~d~i~~l 206 (206)
T TIGR03608 157 LADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVA-KQADRVIEL 206 (206)
T ss_pred EEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHH-hhcCEEEeC
Confidence 999999999999999999999875 57999999999977 589999875
No 379
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-38 Score=316.62 Aligned_cols=209 Identities=22% Similarity=0.354 Sum_probs=158.8
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS-----DMSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~-----~~~~~~~~i~~~~~~~-----~ 141 (582)
.|+++||++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.++ +.|.+ .+++... .
T Consensus 19 ~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I----~~~g~~i~~~~~~ 94 (267)
T PRK14235 19 KMRARDVSVFYGEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKI----TLDGEDIYDPRLD 94 (267)
T ss_pred eEEEEeEEEEECCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEE----EECCEECcccccc
Confidence 69999999999988999999999999999999999999999999999998764 44432 2222111 0
Q ss_pred HHHHHHHhcc--ccCCC--cchHHHHHHHH--HcC--ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHH
Q 007982 142 LEKEAEILGA--QEDGG--GEQLERVYERL--EAL--DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~~--~~~~~~~~~~l--~~~--~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~L 210 (582)
.......+++ +.... ....+++.... ... .......++.++++.+|+.. ...++++.+|||||||||+|
T Consensus 95 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~l 174 (267)
T PRK14235 95 VVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLHEPGTGLSGGQQQRLCI 174 (267)
T ss_pred hHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhhCCcccCCHHHHHHHHH
Confidence 1111122222 22111 13333332211 111 22334567888999999953 23567899999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 175 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 250 (267)
T PRK14235 175 ARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVE-VGDTEKMF 250 (267)
T ss_pred HHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999876 4699999999999999999999999999974 46665543
No 380
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-38 Score=284.63 Aligned_cols=213 Identities=27% Similarity=0.428 Sum_probs=168.9
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceee---ee-----------echH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEA---VI-----------SCDE 137 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~---~i-----------~~~~ 137 (582)
.|+++|+.|+||...+|++||++-+.|+++.|||.|||||||||+||+-+..|+.|.+.. .+ ..+.
T Consensus 6 ~l~v~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ad~ 85 (256)
T COG4598 6 ALEVEDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPADK 85 (256)
T ss_pred ceehhHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeCCH
Confidence 589999999999999999999999999999999999999999999999888887664321 01 1111
Q ss_pred HHH-HHHHHHHHhccccCCC---cchHHHHHHH---HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHH
Q 007982 138 ERL-KLEKEAEILGAQEDGG---GEQLERVYER---LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 138 ~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~---l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~L 210 (582)
..+ +++.....++ |..+. .+.++++.+. .-.....++.+++..+|..+|+.+. .+.+|..|||||+||++|
T Consensus 86 ~q~~r~Rs~L~mVF-Q~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek-~~~YP~~LSGGQQQR~aI 163 (256)
T COG4598 86 RQLQRLRTRLGMVF-QHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEK-ADAYPAHLSGGQQQRVAI 163 (256)
T ss_pred HHHHHHHHHhhHhh-hhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhh-hhcCccccCchHHHHHHH
Confidence 111 1222222222 22111 2334444432 1245677888899999999999764 578999999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHh
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQT 287 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 287 (582)
||||+.+|+++|+|||||+|||+-.-+++..++++ ++|+++|||.+.|+..+++++++|++|.|. ..|++++.+.+
T Consensus 164 ARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iE-E~G~P~qvf~n 242 (256)
T COG4598 164 ARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIE-EEGPPEQVFGN 242 (256)
T ss_pred HHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceec-ccCChHHHhcC
Confidence 99999999999999999999999999988887765 899999999999999999999999999884 67888877653
No 381
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.3e-37 Score=321.93 Aligned_cols=213 Identities=23% Similarity=0.356 Sum_probs=161.2
Q ss_pred cceEEeeeEEEEC----CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------
Q 007982 71 RDIRIESLSVTFH----GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------ 140 (582)
Q Consensus 71 ~~i~v~nls~~y~----~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------ 140 (582)
.+|+++||++.|+ ...+|+|+||+|++||+++|+|+||||||||+++|+|+.+++. ...|.+.+++..+
T Consensus 11 ~~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~-~~sG~I~~~G~~i~~~~~~ 89 (330)
T PRK09473 11 ALLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANG-RIGGSATFNGREILNLPEK 89 (330)
T ss_pred ceEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCC-CCCeEEEECCEECCcCCHH
Confidence 3799999999995 3579999999999999999999999999999999999998741 0122333332211
Q ss_pred HHHHHH-HHhc--cccCC-----CcchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCCh--hhhhccCCCCChhHHHH
Q 007982 141 KLEKEA-EILG--AQEDG-----GGEQLERVYERLE---ALDASTAEKRAAEILYGLGFNK--TMQAKKTRDFSGGWRMR 207 (582)
Q Consensus 141 ~~~~~~-~~~~--~~~~~-----~~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~--~~~~~~~~~LSGGqrqR 207 (582)
...... ..++ +|... .......+.+.+. .....+...++.++|+.+||.+ ...++++++|||||+||
T Consensus 90 ~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~p~~LSgG~~QR 169 (330)
T PRK09473 90 ELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQR 169 (330)
T ss_pred HHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcCCcccCCHHHHHH
Confidence 111111 1222 22221 1122233333332 2334455678899999999964 23467999999999999
Q ss_pred HHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhH
Q 007982 208 IALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQ 283 (582)
Q Consensus 208 v~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~ 283 (582)
|+|||||+.+|++||+||||++||+.++..+.++|+++ +.|+|+||||++++..+||+|++|.+|+|+. .|+.++
T Consensus 170 v~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive-~g~~~~ 248 (330)
T PRK09473 170 VMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTME-YGNARD 248 (330)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE-ECCHHH
Confidence 99999999999999999999999999999999988654 6799999999999999999999999999974 577666
Q ss_pred HH
Q 007982 284 YV 285 (582)
Q Consensus 284 ~~ 285 (582)
+.
T Consensus 249 i~ 250 (330)
T PRK09473 249 VF 250 (330)
T ss_pred HH
Confidence 54
No 382
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.1e-37 Score=308.87 Aligned_cols=203 Identities=25% Similarity=0.346 Sum_probs=153.3
Q ss_pred cceEEeeeEEEECC----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechHHHH-HHHH
Q 007982 71 RDIRIESLSVTFHG----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDEERL-KLEK 144 (582)
Q Consensus 71 ~~i~v~nls~~y~~----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~~~~-~~~~ 144 (582)
.+|+++||+++|++ ..+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+... ........ ....
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 37999999999975 369999999999999999999999999999999999998876643210 01110000 0000
Q ss_pred -HHHHhcc--ccCC---CcchHHHHHHH--HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhc
Q 007982 145 -EAEILGA--QEDG---GGEQLERVYER--LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFI 216 (582)
Q Consensus 145 -~~~~~~~--~~~~---~~~~~~~~~~~--l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~ 216 (582)
....+++ +... .....+++... .........++++.++++.+|+.+ ..++++.+||||||||++|||||+.
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~Ge~qrl~la~al~~ 163 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGK-RLDHLPAQLSGGEQQRVALARAFNG 163 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHh-HhhCChhhCCHHHHHHHHHHHHHhc
Confidence 0112221 2211 12233333221 112233445677899999999974 5678999999999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEE
Q 007982 217 NPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLK 275 (582)
Q Consensus 217 ~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~ 275 (582)
+|++|||||||++||+.++.++.++|+++ +.|||++|||++++. .||++++|++|+++
T Consensus 164 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~-~~d~i~~l~~g~i~ 225 (228)
T PRK10584 164 RPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAA-RCDRRLRLVNGQLQ 225 (228)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEE
Confidence 99999999999999999999999998654 579999999999986 49999999999985
No 383
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-37 Score=311.35 Aligned_cols=204 Identities=17% Similarity=0.212 Sum_probs=166.3
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC--C---CCcEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV--P---LDGMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~--p---~~G~i~~~~~--------- 429 (582)
.++|+++|+++.|+ ++.+|+|+||+|.+|++++|+||||||||||+++|+|++. | ++|+|.+.+.
T Consensus 4 ~~~i~~~~l~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 4 EIILSTKNLNLWYG-EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred cceEEEeeeEEEEC-CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 46899999999996 4679999999999999999999999999999999999976 3 4899976542
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhc--C-C--C--ChHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKE--Y-P--G--NEEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVV 495 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~-~--~--~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~ 495 (582)
..++|++|... +. ..++.+++... . . . ...+.+.++++.+++... ..+.++.+|||||+|||+
T Consensus 83 ~~~~~~i~~~~q~~~--~~-~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~ 159 (253)
T PRK14261 83 VALRRKIGMVFQRPN--PF-PKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLC 159 (253)
T ss_pred hhhhceEEEEecCCc--cC-cccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHH
Confidence 23788888753 22 24777766421 1 1 1 113356778888887431 124567899999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 496 FAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 496 lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||+++.+|++|||||||+|||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++ ..|+.+++.+
T Consensus 160 laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~-~~g~~~~~~~ 237 (253)
T PRK14261 160 IARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLI-EFDKTTQIFE 237 (253)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEE-EcCCHHHHHh
Confidence 999999999999999999999999999999998876 479999999999999999999999999997 5788887753
No 384
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=312.82 Aligned_cols=203 Identities=20% Similarity=0.274 Sum_probs=166.9
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc----------
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH---------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~---------- 429 (582)
++|+++|+++.|++ ..+|+|+||+|.+|++++|+|+||||||||+++|+|+++| ++|+|.+.+.
T Consensus 6 ~~l~~~~l~~~~~~-~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (259)
T PRK14260 6 PAIKVKDLSFYYNT-SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININ 84 (259)
T ss_pred ceEEEEEEEEEECC-eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchH
Confidence 47899999999964 5799999999999999999999999999999999999985 4899987542
Q ss_pred ---eeEEEechhhhhhcCCcccHHHHHHhc------CCCCh-HHHHHHHHHhcCCCC---ccccCCCCCCChhHHHHHHH
Q 007982 430 ---LRIAQFHQHLAEKLDMDMSALQYMIKE------YPGNE-EEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSRVVF 496 (582)
Q Consensus 430 ---~~~~~~~q~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqrv~l 496 (582)
..++|++|... +. ..++.+++... ++... .+.+.++++.+|+.. .....++.+|||||+|||+|
T Consensus 85 ~~~~~i~~v~q~~~--l~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~l 161 (259)
T PRK14260 85 RLRRQIGMVFQRPN--PF-PMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLCI 161 (259)
T ss_pred hhhhheEEEecccc--cC-CccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHH
Confidence 14788888753 22 36777776421 11111 345678889998842 12345668999999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEe-----CCeEEEEcCCHHH
Q 007982 497 AWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCE-----NQAVTRWEGDIMD 569 (582)
Q Consensus 497 Aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~-----~G~i~~~~g~~~~ 569 (582)
||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++..+||++++|+ +|+++ ..|++.+
T Consensus 162 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~-~~~~~~~ 240 (259)
T PRK14260 162 ARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMV-EFGVTTQ 240 (259)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEE-EeCCHHH
Confidence 99999999999999999999999999999999876 4699999999999999999999998 59987 4788888
Q ss_pred HHH
Q 007982 570 FKL 572 (582)
Q Consensus 570 ~~~ 572 (582)
+.+
T Consensus 241 ~~~ 243 (259)
T PRK14260 241 IFS 243 (259)
T ss_pred Hhc
Confidence 753
No 385
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.6e-38 Score=340.80 Aligned_cols=203 Identities=27% Similarity=0.345 Sum_probs=172.1
Q ss_pred CeEEEEEEEEEecCC--ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------ee
Q 007982 365 PVLQFVEVTFGYTPD--NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LR 431 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~--~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~ 431 (582)
..|+|+||+|+||.. .++|+|+||+|++||++|||||||+||||++++|..+|.|++|+|..++. .+
T Consensus 464 G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~ 543 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRK 543 (716)
T ss_pred ceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHH
Confidence 469999999999843 46999999999999999999999999999999999999999999998763 35
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCcccc----------CCCCCCChhHHHHHHHHHHHc
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQV----------MPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----------~~~~~LSgGqkqrv~lAral~ 501 (582)
++++.|.+. -+.-|+.+++....+..+.++++.+.+..+-.++... ....+||||||||++|||||+
T Consensus 544 Ig~V~QEPv---LFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARALl 620 (716)
T KOG0058|consen 544 IGLVGQEPV---LFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARALL 620 (716)
T ss_pred eeeeeccce---eecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHHHHHh
Confidence 888888763 3677899999877666666677766665544322221 124699999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++|.||||||.||+||.++...+.++|.+. +.|||+|.|.+..+. -||+|+|+++|+|.+ .|+.+++.+
T Consensus 621 r~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~-~Ad~Ivvi~~G~V~E-~G~h~eLl~ 691 (716)
T KOG0058|consen 621 RNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVR-HADQIVVIDKGRVVE-MGTHDELLS 691 (716)
T ss_pred cCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhh-hccEEEEEcCCeEEe-cccHHHHhh
Confidence 999999999999999999999999999865 589999999999994 699999999999986 777776544
No 386
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1e-37 Score=356.36 Aligned_cols=201 Identities=29% Similarity=0.422 Sum_probs=175.2
Q ss_pred eEEEEEEEEEecC-CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 366 VLQFVEVTFGYTP-DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~-~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
-|+++||+|+|++ ++++|+|+||+|++|+++||+|+||||||||+|+|+|+++|++|+|..++. ..++
T Consensus 451 ~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~ 530 (686)
T TIGR03797 451 AIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLG 530 (686)
T ss_pred eEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccE
Confidence 5899999999964 467999999999999999999999999999999999999999999988763 2589
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~~ 503 (582)
|++|+.. -+..|+.+++....+ .+.+++.++++..|+.+.....| ...||||||||++||||++++
T Consensus 531 ~v~Q~~~---lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~ 606 (686)
T TIGR03797 531 VVLQNGR---LMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRK 606 (686)
T ss_pred EEccCCc---cCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999864 256788998875544 56677888999888865443322 357999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|++|||||||++||+.+.+.+.+.|++++.|+|+|||+++.+. .||+|++|++|++++ +|+.+++.+
T Consensus 607 p~iLiLDEpTS~LD~~te~~i~~~L~~~~~T~IiItHr~~~i~-~~D~Iivl~~G~iv~-~G~~~~Ll~ 673 (686)
T TIGR03797 607 PRILLFDEATSALDNRTQAIVSESLERLKVTRIVIAHRLSTIR-NADRIYVLDAGRVVQ-QGTYDELMA 673 (686)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHhCCeEEEEecChHHHH-cCCEEEEEECCEEEE-ECCHHHHHh
Confidence 9999999999999999999999999999899999999999985 599999999999975 899887653
No 387
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-37 Score=314.58 Aligned_cols=207 Identities=23% Similarity=0.314 Sum_probs=158.6
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAEI 148 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 148 (582)
+|+++||+++|+++.+|+++||+|.+|++++|+||||||||||+++|+|+.+++.|.+. +++... ........
T Consensus 7 ~l~i~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~----~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 7 RLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVW----LDGEHIQHYASKEVARR 82 (265)
T ss_pred EEEEEEEEEEECCEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEE----ECCEEhhhCCHHHHhhh
Confidence 79999999999998999999999999999999999999999999999999988766432 222111 01111112
Q ss_pred hcc--ccCC---CcchHHHHHHH-HHc---C--ChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 149 LGA--QEDG---GGEQLERVYER-LEA---L--DASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 149 ~~~--~~~~---~~~~~~~~~~~-l~~---~--~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
+++ +... .....+++... ... . .......++.++++.+|+.+ ..++++.+||||||||++|||||+.+
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~Gq~qrv~laral~~~ 161 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITH-LADQSVDTLSGGQRQRAWIAMVLAQE 161 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHH-HhcCCcccCChHHHHHHHHHHHHhcC
Confidence 222 2211 11222222111 000 0 11223457889999999964 56899999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|++|||||||++||+.++..+.+.|.++ +.|||++|||++++..+||++++|++|+++. .|..+++
T Consensus 162 p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~ 231 (265)
T PRK10253 162 TAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVA-QGAPKEI 231 (265)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHH
Confidence 9999999999999999999999998764 5799999999999999999999999999974 5665544
No 388
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=315.32 Aligned_cols=216 Identities=19% Similarity=0.273 Sum_probs=159.7
Q ss_pred CccceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCC-ceeeeeechHHHH----HHH
Q 007982 69 LSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMS-SLEAVISCDEERL----KLE 143 (582)
Q Consensus 69 ~~~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~-~~~~~i~~~~~~~----~~~ 143 (582)
.+.+|+++||+++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|..+ ...|.+.+++... ...
T Consensus 18 ~~~~l~i~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 18 AAPAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred cCcEEEEeeEEEEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 34579999999999999999999999999999999999999999999999999875210 0122233222111 001
Q ss_pred HHHHHhcc--ccCC--CcchHHHHHHHHH--c-CChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHHHH
Q 007982 144 KEAEILGA--QEDG--GGEQLERVYERLE--A-LDASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALARA 213 (582)
Q Consensus 144 ~~~~~~~~--~~~~--~~~~~~~~~~~l~--~-~~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LAra 213 (582)
.....+.+ +... .....+++..... . ........++.++++.+++.. ...++.+.+|||||+|||+||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~LAra 177 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLART 177 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHHHHH
Confidence 11122222 2111 1222333321111 1 123334456778899999863 23567899999999999999999
Q ss_pred HhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 214 LFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 214 L~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|+.+|+||||||||++||+.++.+|.+.|+++ ..|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 178 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~-~g~~~~~~ 250 (276)
T PRK14271 178 LAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVE-EGPTEQLF 250 (276)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999876 4799999999999999999999999999974 46666554
No 389
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=315.76 Aligned_cols=210 Identities=20% Similarity=0.317 Sum_probs=156.9
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCCceeeeeechHHHH-----
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA-----SDMSSLEAVISCDEERL----- 140 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~-----~~~~~~~~~i~~~~~~~----- 140 (582)
.+|+++|++++|+++.+|+++||+|++|++++|+|+||||||||+++|+|+.+ ++.|. +.+++...
T Consensus 20 ~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~----i~~~g~~i~~~~~ 95 (268)
T PRK14248 20 HILEVKDLSIYYGEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGE----ILYEGLNILDSNI 95 (268)
T ss_pred ceEEEEEEEEEeCCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceE----EEECCEEcccccc
Confidence 37999999999998899999999999999999999999999999999999753 34343 22222111
Q ss_pred HHHHHHHHhcc--ccCCC--cchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHH
Q 007982 141 KLEKEAEILGA--QEDGG--GEQLERVYERLE--AL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 141 ~~~~~~~~~~~--~~~~~--~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~L 210 (582)
........+++ +.... ....+++...+. .. ........+.++++.+++.. ...++++.+||||||||++|
T Consensus 96 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl~l 175 (268)
T PRK14248 96 NVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCI 175 (268)
T ss_pred cHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHHHH
Confidence 01111122222 22111 123333322211 11 11223456778888888742 34578899999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||+.+|++|||||||++||+.++.++.++|+++ +.|||++|||++++..+||++++|++|+++. .|+.+++.
T Consensus 176 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~~ 251 (268)
T PRK14248 176 ARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVE-YDQTEQIF 251 (268)
T ss_pred HHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999876 4799999999999999999999999999975 46666543
No 390
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-38 Score=315.61 Aligned_cols=207 Identities=26% Similarity=0.312 Sum_probs=158.2
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAEI 148 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 148 (582)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ........
T Consensus 2 ~l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~----~~g~~~~~~~~~~~~~~ 77 (258)
T PRK13548 2 MLEARNLSVRLGGRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVR----LNGRPLADWSPAELARR 77 (258)
T ss_pred eEEEEeEEEEeCCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEE----ECCEEcccCCHHHhhhh
Confidence 68999999999998999999999999999999999999999999999999888766432 211110 00111112
Q ss_pred hc--cccCC---CcchHHHHHHHHHc--CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHh------
Q 007982 149 LG--AQEDG---GGEQLERVYERLEA--LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALF------ 215 (582)
Q Consensus 149 ~~--~~~~~---~~~~~~~~~~~l~~--~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~------ 215 (582)
++ ++... .....+++...... ........++.++++.+|+.+ ..++++.+|||||||||+|||||+
T Consensus 78 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgGe~qrv~la~al~~~~~~~ 156 (258)
T PRK13548 78 RAVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAH-LAGRDYPQLSGGEQQRVQLARVLAQLWEPD 156 (258)
T ss_pred eEEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHh-HhcCCcccCCHHHHHHHHHHHHHhcccccC
Confidence 22 12211 11233333221111 112234456889999999964 568899999999999999999999
Q ss_pred cCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 216 INPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 216 ~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
.+|++|||||||++||+.++..+.++|+++ +.|||++|||++++..+||+|++|++|+++ ..|+++++
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 228 (258)
T PRK13548 157 GPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLV-ADGTPAEV 228 (258)
T ss_pred CCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEE-eeCCHHHH
Confidence 599999999999999999999999988754 579999999999999999999999999997 45666554
No 391
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-37 Score=318.77 Aligned_cols=210 Identities=20% Similarity=0.230 Sum_probs=169.9
Q ss_pred cCCCCCCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc---
Q 007982 358 DVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH--- 429 (582)
Q Consensus 358 ~~~~~~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~--- 429 (582)
+++...+++|.++|+++.|++ +.+|+++||+|.+|++++|+||||||||||+++|+|+++ |++|+|.+.+.
T Consensus 37 ~~~~~~~~~l~i~nl~~~~~~-~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~ 115 (305)
T PRK14264 37 DYEFDGDAKLSVEDLDVYYGD-DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIY 115 (305)
T ss_pred ccccCCCceEEEEEEEEEeCC-eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 333445678999999999964 679999999999999999999999999999999999986 68999987542
Q ss_pred ----------eeEEEechhhhhhcCCcccHHHHHHhcC-----------------CC--ChHHHHHHHHHhcCCCC---c
Q 007982 430 ----------LRIAQFHQHLAEKLDMDMSALQYMIKEY-----------------PG--NEEEKMRAAIGRFGLTG---K 477 (582)
Q Consensus 430 ----------~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----------------~~--~~~~~~~~~l~~~gl~~---~ 477 (582)
..++|++|... +. ..++.+++.... .. ...+.+.++++.+++.. .
T Consensus 116 ~~~~~~~~~~~~i~~v~q~~~--l~-~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 192 (305)
T PRK14264 116 QDGVNLVELRKRVGMVFQSPN--PF-PKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVND 192 (305)
T ss_pred cccccHHHHhhceEEEccCCc--cc-cccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhhH
Confidence 24788888753 22 246766654211 00 11345778889998842 1
Q ss_pred cccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEE-EE
Q 007982 478 AQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEI-WV 554 (582)
Q Consensus 478 ~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i-~~ 554 (582)
....++.+|||||+|||+|||||+.+|+||||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||++ ++
T Consensus 193 ~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~ 272 (305)
T PRK14264 193 RLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVF 272 (305)
T ss_pred HhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEE
Confidence 224556899999999999999999999999999999999999999999999876 468999999999999999996 57
Q ss_pred EeCCeEEEEcCCHHHHHH
Q 007982 555 CENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 555 l~~G~i~~~~g~~~~~~~ 572 (582)
|++|+++ +.|+++++..
T Consensus 273 l~~G~i~-~~g~~~~~~~ 289 (305)
T PRK14264 273 LTGGELV-EYDDTDKIFE 289 (305)
T ss_pred ecCCEEE-EeCCHHHHHh
Confidence 8999997 4788887754
No 392
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=316.53 Aligned_cols=207 Identities=26% Similarity=0.381 Sum_probs=158.4
Q ss_pred ceEEeeeEEEEC-CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH----HHHHHH
Q 007982 72 DIRIESLSVTFH-GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL----KLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~-~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~----~~~~~~ 146 (582)
+|+++||+++|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ......
T Consensus 1 ml~~~~l~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~----~~g~~~~~~~~~~~~~ 76 (274)
T PRK13644 1 MIRLENVSYSYPDGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVL----VSGIDTGDFSKLQGIR 76 (274)
T ss_pred CEEEEEEEEEcCCCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE----ECCEECCccccHHHHH
Confidence 478999999995 56799999999999999999999999999999999999888766432 221111 001111
Q ss_pred HHhc--cccCC----CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 147 EILG--AQEDG----GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 147 ~~~~--~~~~~----~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
..++ ++... .....+++..... ..+.....+++.++++.+|+.. ..++++.+|||||+|||+|||||+.+|
T Consensus 77 ~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LS~G~~qrv~laral~~~p 155 (274)
T PRK13644 77 KLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEK-YRHRSPKTLSGGQGQCVALAGILTMEP 155 (274)
T ss_pred hheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHH-HhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 2222 22211 1122233321111 2334455667889999999964 568899999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+||||||||++||+.++..+.+.|+++ +.|||++|||++++. .||++++|++|+++ +.|+.+++.
T Consensus 156 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~-~~d~v~~l~~G~i~-~~g~~~~~~ 223 (274)
T PRK13644 156 ECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELH-DADRIIVMDRGKIV-LEGEPENVL 223 (274)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHh-hCCEEEEEECCEEE-EECCHHHHh
Confidence 999999999999999999999998764 679999999999995 69999999999997 457766654
No 393
>cd03221 ABCF_EF-3 ABCF_EF-3 Elongation factor 3 (EF-3) is a cytosolic protein required by fungal ribosomes for in vitro protein synthesis and for in vivo growth. EF-3 stimulates the binding of the EF-1: GTP: aa-tRNA ternary complex to the ribosomal A site by facilitated release of the deacylated tRNA from the E site. The reaction requires ATP hydrolysis. EF-3 contains two ATP nucleotide binding sequence (NBS) motifs. NBSI is sufficient for the intrinsic ATPase activity. NBSII is essential for the ribosome-stimulated functions.
Probab=100.00 E-value=1.5e-37 Score=285.82 Aligned_cols=144 Identities=43% Similarity=0.724 Sum_probs=135.4
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCc
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMD 446 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~ 446 (582)
|+++|+++.|++ .++++++||++.+||+++|+||||||||||+++|+|+++|++|+|...+...++|++|
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~~~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~~~~~i~~~~~--------- 70 (144)
T cd03221 1 IELENLSKTYGG-KLLLKDISLTINPGDRIGLVGRNGAGKSTLLKLIAGELEPDEGIVTWGSTVKIGYFEQ--------- 70 (144)
T ss_pred CEEEEEEEEECC-ceEEEeeEEEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCeEEEEEEcc---------
Confidence 468999999964 5799999999999999999999999999999999999999999999887656777665
Q ss_pred ccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHH
Q 007982 447 MSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAE 526 (582)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~ 526 (582)
||+||+||++|||+++.+|++|||||||++||+.++..+.+
T Consensus 71 ---------------------------------------lS~G~~~rv~laral~~~p~illlDEP~~~LD~~~~~~l~~ 111 (144)
T cd03221 71 ---------------------------------------LSGGEKMRLALAKLLLENPNLLLLDEPTNHLDLESIEALEE 111 (144)
T ss_pred ---------------------------------------CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999
Q ss_pred HHHhcCceEEEEecCHHHHHhhcCEEEEEeCCe
Q 007982 527 ALNEWDGGLVLVSHDFRLINQVAHEIWVCENQA 559 (582)
Q Consensus 527 ~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~ 559 (582)
.+++++.|||++||+++++..+||++++|++|+
T Consensus 112 ~l~~~~~til~~th~~~~~~~~~d~v~~l~~g~ 144 (144)
T cd03221 112 ALKEYPGTVILVSHDRYFLDQVATKIIELEDGK 144 (144)
T ss_pred HHHHcCCEEEEEECCHHHHHHhCCEEEEEeCCC
Confidence 999988899999999999999999999999885
No 394
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-37 Score=295.44 Aligned_cols=160 Identities=26% Similarity=0.427 Sum_probs=136.9
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEec
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQFH 436 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~~ 436 (582)
|+++|+++.|++ .++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..++|++
T Consensus 1 l~~~~l~~~~~~-~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~~ 79 (173)
T cd03230 1 IEVRNLSKRYGK-KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEPEEVKRRIGYLP 79 (173)
T ss_pred CEEEEEEEEECC-eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccchHhhhccEEEEe
Confidence 468999999964 57999999999999999999999999999999999999999999987653 1356666
Q ss_pred hhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCC
Q 007982 437 QHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHL 516 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~L 516 (582)
|... +....++.+++. |||||+|||+|||||+.+|++|||||||++|
T Consensus 80 q~~~--~~~~~tv~~~~~-------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~L 126 (173)
T cd03230 80 EEPS--LYENLTVRENLK-------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGL 126 (173)
T ss_pred cCCc--cccCCcHHHHhh-------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCC
Confidence 6532 222233333321 9999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeE
Q 007982 517 DIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAV 560 (582)
Q Consensus 517 D~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i 560 (582)
|+.++..+.+.|+++ +.|||++|||.+++..+||++++|++|++
T Consensus 127 D~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 127 DPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 999999999999876 46899999999999999999999999864
No 395
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.5e-38 Score=310.20 Aligned_cols=208 Identities=23% Similarity=0.315 Sum_probs=153.3
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechHHHHHHHHHHHHhcc
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDEERLKLEKEAEILGA 151 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~ 151 (582)
|+++||++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+... ....... ........+++
T Consensus 1 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~~~i~~ 79 (230)
T TIGR03410 1 LEVSNLNVYYGQSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLP-PHERARAGIAY 79 (230)
T ss_pred CEEEeEEEEeCCeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCC-HHHHHHhCeEE
Confidence 578999999998899999999999999999999999999999999999998876643211 0110000 00001112222
Q ss_pred --ccCC---CcchHHHHHHHHHcCChhHHHHHHHHHHHhCC-CChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecC
Q 007982 152 --QEDG---GGEQLERVYERLEALDASTAEKRAAEILYGLG-FNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDE 225 (582)
Q Consensus 152 --~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lg-l~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDE 225 (582)
+... .....+++......... .....+.++++.++ +. ...++++.+|||||||||+|||||+.+|++|||||
T Consensus 80 ~~q~~~~~~~~tv~~~l~~~~~~~~~-~~~~~~~~~l~~~~~l~-~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDE 157 (230)
T TIGR03410 80 VPQGREIFPRLTVEENLLTGLAALPR-RSRKIPDEIYELFPVLK-EMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDE 157 (230)
T ss_pred eccCCcccCCCcHHHHHHHHHHhcCc-chHHHHHHHHHHHHhHH-HHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecC
Confidence 2111 11222333221111111 12234566777776 43 35688999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 226 PTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 226 Pt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
||++||+.++.++.++|.++ +.|+|++||+++++..+||++++|++|+++. .|+.+++
T Consensus 158 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~-~~~~~~~ 219 (230)
T TIGR03410 158 PTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVA-SGAGDEL 219 (230)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ECCHHHc
Confidence 99999999999999998764 5799999999999999999999999999964 5665543
No 396
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=9.2e-38 Score=298.80 Aligned_cols=165 Identities=24% Similarity=0.356 Sum_probs=138.7
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------ee
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LR 431 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~ 431 (582)
.++|+++|++++| +|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..
T Consensus 2 ~~~l~~~~l~~~~-----~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (182)
T cd03215 2 EPVLEVRGLSVKG-----AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAG 76 (182)
T ss_pred CcEEEEeccEEEe-----eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCC
Confidence 3589999999988 899999999999999999999999999999999999999999987652 13
Q ss_pred EEEechhhh-hhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 007982 432 IAQFHQHLA-EKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLD 510 (582)
Q Consensus 432 ~~~~~q~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLD 510 (582)
++|++|... ..+....++.+++.... .|||||+|||+||||++.+|++||||
T Consensus 77 i~~~~q~~~~~~~~~~~t~~e~l~~~~---------------------------~LS~G~~qrl~la~al~~~p~llllD 129 (182)
T cd03215 77 IAYVPEDRKREGLVLDLSVAENIALSS---------------------------LLSGGNQQKVVLARWLARDPRVLILD 129 (182)
T ss_pred eEEecCCcccCcccCCCcHHHHHHHHh---------------------------hcCHHHHHHHHHHHHHccCCCEEEEC
Confidence 566666532 11222334444432110 09999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeE
Q 007982 511 EPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAV 560 (582)
Q Consensus 511 EPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i 560 (582)
|||++||+.++..+.+.|.++ +.|+|++|||++++..+||++++|++|++
T Consensus 130 EP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 130 EPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999998875 57999999999999999999999999874
No 397
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.6e-37 Score=307.41 Aligned_cols=192 Identities=27% Similarity=0.437 Sum_probs=157.9
Q ss_pred CCeEEEEEEEEEecCC--ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------e
Q 007982 364 PPVLQFVEVTFGYTPD--NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------L 430 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~--~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~ 430 (582)
.++|+++|+++.|++. ..+|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. .
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 5789999999999642 36999999999999999999999999999999999999999999987653 2
Q ss_pred eEEEechhhhhhcCCcccHHHHHHhcCCCC-hH--------HHHHHHHHhc--CCCCccccCCCCCCChhHHHHHHHHHH
Q 007982 431 RIAQFHQHLAEKLDMDMSALQYMIKEYPGN-EE--------EKMRAAIGRF--GLTGKAQVMPMKNLSDGQRSRVVFAWL 499 (582)
Q Consensus 431 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~l~~~--gl~~~~~~~~~~~LSgGqkqrv~lAra 499 (582)
.++|++|... + +..++.+++....... .. ..+.++++.+ |+..... .++.+|||||+|||+|||+
T Consensus 89 ~i~~~~q~~~--l-~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~-~~~~~LSgG~~qrv~lara 164 (226)
T cd03248 89 KVSLVGQEPV--L-FARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVG-EKGSQLSGGQKQRVAIARA 164 (226)
T ss_pred hEEEEecccH--H-HhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhh-cCCCcCCHHHHHHHHHHHH
Confidence 4788888753 2 2347777664322111 10 1135667778 7766544 4568999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeE
Q 007982 500 AYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAV 560 (582)
Q Consensus 500 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i 560 (582)
|+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++. .||+|++|++|++
T Consensus 165 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~d~i~~l~~g~i 226 (226)
T cd03248 165 LIRNPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVE-RADQILVLDGGRI 226 (226)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHH-hCCEEEEecCCcC
Confidence 99999999999999999999999999999876 369999999999996 5999999999874
No 398
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.5e-38 Score=331.76 Aligned_cols=203 Identities=28% Similarity=0.389 Sum_probs=175.5
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
.-++++|++|.|++++++++|+||++++|+.+||||+||||||||+++|+|+++|++|+|.+++. ..++
T Consensus 319 ~ei~~~~l~~~y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~ 398 (559)
T COG4988 319 IEISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQIS 398 (559)
T ss_pred ceeeecceEEecCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHee
Confidence 34667799999987778999999999999999999999999999999999999999999998763 2488
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCcccc-----CCC----CCCChhHHHHHHHHHHHccCC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQV-----MPM----KNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----~~~----~~LSgGqkqrv~lAral~~~p 504 (582)
+++|++. -+.-|+.+++....+..+++++.+++++.|+.+.... ..+ ..|||||+|||++|||++.++
T Consensus 399 ~v~Q~p~---lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~ 475 (559)
T COG4988 399 WVSQNPY---LFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPA 475 (559)
T ss_pred eeCCCCc---cccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcCCCcccchhccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 9999864 3567888888766565667889999999888665442 222 459999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+++|+||||+|||.++...+.+.|.+. ++|||+|||++..+. -||+|++|++|++++ .|..+++.+
T Consensus 476 ~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~-~~D~I~vld~G~l~~-~g~~~~L~~ 543 (559)
T COG4988 476 SLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAA-DADRIVVLDNGRLVE-QGTHEELSE 543 (559)
T ss_pred CEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHh-cCCEEEEecCCceec-cCCHHHHhh
Confidence 999999999999999999999999886 579999999999995 599999999999986 888888743
No 399
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.7e-37 Score=291.54 Aligned_cols=158 Identities=25% Similarity=0.355 Sum_probs=132.2
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCc
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMD 446 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~ 446 (582)
|+++|+++.|++ .++++++||+|.+||+++|+||||||||||+++|+|+++|++|+|.+.+. .+...
T Consensus 1 l~~~~l~~~~~~-~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~-~~~~~----------- 67 (163)
T cd03216 1 LELRGITKRFGG-VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGK-EVSFA----------- 67 (163)
T ss_pred CEEEEEEEEECC-eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCE-ECCcC-----------
Confidence 478999999964 57999999999999999999999999999999999999999999987653 11100
Q ss_pred ccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHH
Q 007982 447 MSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAE 526 (582)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~ 526 (582)
...+ . .-..+++ +.+|||||+|||+||||++.+|++|||||||++||+.++..+.+
T Consensus 68 -~~~~------------~---~~~~i~~--------~~qLS~G~~qrl~laral~~~p~illlDEP~~~LD~~~~~~l~~ 123 (163)
T cd03216 68 -SPRD------------A---RRAGIAM--------VYQLSVGERQMVEIARALARNARLLILDEPTAALTPAEVERLFK 123 (163)
T ss_pred -CHHH------------H---HhcCeEE--------EEecCHHHHHHHHHHHHHhcCCCEEEEECCCcCCCHHHHHHHHH
Confidence 0000 0 0001111 01299999999999999999999999999999999999999999
Q ss_pred HHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEE
Q 007982 527 ALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVT 561 (582)
Q Consensus 527 ~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 561 (582)
.|+++ +.|||++|||++++.++||++++|++|++.
T Consensus 124 ~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~ 161 (163)
T cd03216 124 VIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVV 161 (163)
T ss_pred HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99876 579999999999999999999999999985
No 400
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-37 Score=311.54 Aligned_cols=209 Identities=21% Similarity=0.345 Sum_probs=158.4
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS-----DMSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~-----~~~~~~~~i~~~~~~~-----~ 141 (582)
.|+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.++ +.|. +.+++... .
T Consensus 4 ~l~i~~v~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~----I~~~g~~~~~~~~~ 79 (258)
T PRK14241 4 RIDVKDLNIYYGSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGE----VLLDGEDLYGPGVD 79 (258)
T ss_pred cEEEeeEEEEECCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceE----EEECCEeccccccC
Confidence 69999999999988999999999999999999999999999999999998753 3332 33322111 0
Q ss_pred HHHHHHHhcc--ccCC---CcchHHHHHHHHH--c-CChhHHHHHHHHHHHhCCCC---hhhhhccCCCCChhHHHHHHH
Q 007982 142 LEKEAEILGA--QEDG---GGEQLERVYERLE--A-LDASTAEKRAAEILYGLGFN---KTMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~---~~~~~~~~~~~l~--~-~~~~~~~~~~~~~l~~lgl~---~~~~~~~~~~LSGGqrqRv~L 210 (582)
.......+++ +... .....+++..... . ......++++.++++.+|+. ....++++.+|||||||||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 159 (258)
T PRK14241 80 PVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQRLCI 159 (258)
T ss_pred hHHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 0111112222 2111 1233333322221 1 12334456788899999984 134578899999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEe------CCeEEEEcCChh
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQ------NKQLKFYTGNFD 282 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~------~G~i~~~~g~~~ 282 (582)
||||+.+|++|||||||++||+.++.++.++|+++ +.|||+|||+++++..+||++++|+ +|+++. .|+.+
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~-~~~~~ 238 (258)
T PRK14241 160 ARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE-IDDTE 238 (258)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe-cCCHH
Confidence 99999999999999999999999999999999876 4799999999999999999999997 799974 56766
Q ss_pred HHH
Q 007982 283 QYV 285 (582)
Q Consensus 283 ~~~ 285 (582)
++.
T Consensus 239 ~~~ 241 (258)
T PRK14241 239 KIF 241 (258)
T ss_pred HHH
Confidence 554
No 401
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-37 Score=310.82 Aligned_cols=209 Identities=22% Similarity=0.345 Sum_probs=157.1
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC---CCCCceeeeeechHHHH---HHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA---SDMSSLEAVISCDEERL---KLEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~---~~~~~~~~~i~~~~~~~---~~~~~ 145 (582)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+ ++.|. +.+++... .....
T Consensus 2 ~~~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~----i~~~g~~i~~~~~~~~ 77 (246)
T PRK14269 2 IAKTTNLNLFYGKKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGL----VEIEGKDVKNQDVVAL 77 (246)
T ss_pred ceeeeeeEEEECCEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceE----EEECCEecccCCHHHH
Confidence 5899999999998899999999999999999999999999999999999864 34443 22222111 01111
Q ss_pred HHHhcc--ccCCC--cchHHHHHHH--HHcC--ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHHHHH
Q 007982 146 AEILGA--QEDGG--GEQLERVYER--LEAL--DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALARAL 214 (582)
Q Consensus 146 ~~~~~~--~~~~~--~~~~~~~~~~--l~~~--~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LAraL 214 (582)
...+++ +.... ....+++... .... .....+.++.++++.+++.. ...++++.+|||||||||+|||||
T Consensus 78 ~~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral 157 (246)
T PRK14269 78 RKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLKQNALALSGGQQQRLCIARAL 157 (246)
T ss_pred hhhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhcCCcccCCHHHHHHHHHHHHH
Confidence 122322 22111 1222332211 1111 12334556788999999952 235778999999999999999999
Q ss_pred hcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 215 FINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 215 ~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+.+|++|||||||++||+.++.++.+.|.++ +.|+|+|||+++++..+||++++|++|+++. .|+.+++.
T Consensus 158 ~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 229 (246)
T PRK14269 158 AIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIE-FGESKEFF 229 (246)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEE-ECCHHHHH
Confidence 9999999999999999999999999999875 6799999999999999999999999999975 46655543
No 402
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=308.98 Aligned_cols=199 Identities=24% Similarity=0.398 Sum_probs=153.4
Q ss_pred ceEEeeeEEEECC----eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------H
Q 007982 72 DIRIESLSVTFHG----HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~----~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~ 141 (582)
+|+++||++.|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++... .
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i----~~~g~~i~~~~~~~ 80 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDV----IFNGQPMSKLSSAA 80 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEE----EECCEEcCcCCHHH
Confidence 6999999999974 579999999999999999999999999999999999988875543 2222111 0
Q ss_pred HHHHH-HHhcc--ccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHH
Q 007982 142 LEKEA-EILGA--QEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARA 213 (582)
Q Consensus 142 ~~~~~-~~~~~--~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 213 (582)
..... ..+++ +... .....+++.... ........+.++.++++.+|+.+ ..++++.+|||||||||+||||
T Consensus 81 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG~~qrl~la~a 159 (233)
T PRK11629 81 KAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEH-RANHRPSELSGGERQRVAIARA 159 (233)
T ss_pred HHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCch-hhhCChhhCCHHHHHHHHHHHH
Confidence 00011 12222 2211 112333332211 12333445567899999999974 4678999999999999999999
Q ss_pred HhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 214 LFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 214 L~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
|+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+ |++++|++|+++.
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~-~~~~~l~~G~i~~ 225 (233)
T PRK11629 160 LVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRM-SRQLEMRDGRLTA 225 (233)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhh-CEEEEEECCEEEE
Confidence 99999999999999999999999999998764 57999999999999875 6999999999964
No 403
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-37 Score=310.57 Aligned_cols=209 Identities=21% Similarity=0.328 Sum_probs=157.4
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcC---CCC--CCCceeeeeechHHHHH-----
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEI---EAS--DMSSLEAVISCDEERLK----- 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~---~~~--~~~~~~~~i~~~~~~~~----- 141 (582)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+ .++ +.|. +.+++....
T Consensus 3 ~l~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~----i~~~g~~~~~~~~~ 78 (250)
T PRK14245 3 KIDARDVNFWYGDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGE----IRIDGRNIYDKGVQ 78 (250)
T ss_pred EEEEEEEEEEECCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceE----EEECCEeccccccc
Confidence 79999999999988999999999999999999999999999999999986 333 2332 222221110
Q ss_pred HHHHHHHhcc--ccCCC--cchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDGG--GEQLERVYERLE--AL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~~--~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LA 211 (582)
.......+++ +.... ....+++..... .. .....+..+.++++.+|+.+ ...++++.+|||||||||+||
T Consensus 79 ~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 158 (250)
T PRK14245 79 VDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIA 158 (250)
T ss_pred HHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHH
Confidence 1111122222 21111 122333322111 11 12234567888999999853 245788999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++ +.|+++++.
T Consensus 159 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~-~~~~~~~~~ 233 (250)
T PRK14245 159 RAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMV-EYDDTKKIF 233 (250)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEE-EECCHHHHh
Confidence 9999999999999999999999999999999876 479999999999999999999999999997 456766654
No 404
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-37 Score=312.81 Aligned_cols=211 Identities=19% Similarity=0.300 Sum_probs=159.1
Q ss_pred ccceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CCCceeeeeechHHHH----
Q 007982 70 SRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA--S---DMSSLEAVISCDEERL---- 140 (582)
Q Consensus 70 ~~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~--~---~~~~~~~~i~~~~~~~---- 140 (582)
+.+|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+ + +.|. +.+++...
T Consensus 10 ~~~l~i~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~----i~~~g~~~~~~~ 85 (259)
T PRK14274 10 QEVYQINGMNLWYGQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGE----MNYNGSNILKGK 85 (259)
T ss_pred CceEEEeeEEEEECCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceE----EEECCEEccccc
Confidence 347999999999998899999999999999999999999999999999999875 2 2332 22222111
Q ss_pred -HHHHHHHHhcc--ccCC--CcchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHH
Q 007982 141 -KLEKEAEILGA--QEDG--GGEQLERVYERLE--AL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIA 209 (582)
Q Consensus 141 -~~~~~~~~~~~--~~~~--~~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~ 209 (582)
........+++ +... .....+++..... .. .......++.++++.+++.. ...++++.+|||||||||+
T Consensus 86 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~ 165 (259)
T PRK14274 86 VDLVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLC 165 (259)
T ss_pred cCHHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHH
Confidence 01111122222 2211 1123333321111 11 22334556788899998852 2457889999999999999
Q ss_pred HHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 210 LARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 210 LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||||+.+|++|||||||++||+.++..+.++|+++ +.|+|+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 166 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 242 (259)
T PRK14274 166 IARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVE-CNDTNKMF 242 (259)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEE-ECCHHHHh
Confidence 999999999999999999999999999999999876 5799999999999999999999999999974 57776654
No 405
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.6e-37 Score=313.36 Aligned_cols=198 Identities=24% Similarity=0.359 Sum_probs=166.5
Q ss_pred EEEEEEEEEecC-CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 367 LQFVEVTFGYTP-DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 367 l~~~~l~~~y~~-~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
|+++|+++.|++ ..++|+|+||+|.+||+++|+||||||||||+++|+|+++ ++|+|.+.+. ..++|
T Consensus 3 i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i~~ 81 (275)
T cd03289 3 MTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAFGV 81 (275)
T ss_pred EEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhEEE
Confidence 789999999963 3579999999999999999999999999999999999997 7899988662 24889
Q ss_pred echhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCC-----------CChhHHHHHHHHHHHccC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKN-----------LSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~-----------LSgGqkqrv~lAral~~~ 503 (582)
++|.+. + +..|+.+++.. +.....+++.++++.+|+.......| .. |||||+|||+||||++.+
T Consensus 82 v~q~~~--l-f~~tv~~nl~~-~~~~~~~~~~~~l~~~gL~~~~~~~p-~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 82 IPQKVF--I-FSGTFRKNLDP-YGKWSDEEIWKVAEEVGLKSVIEQFP-GQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred ECCCcc--c-chhhHHHHhhh-ccCCCHHHHHHHHHHcCCHHHHHhCc-ccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 998753 2 23577777642 22223467788899999976554433 44 999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|+||||||||++||+.+...+.+.|.+. +.|||+||||++++.. ||||++|++|+++. .|+++++..
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~-~dri~vl~~G~i~~-~g~~~~l~~ 225 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLE-CQRFLVIEENKVRQ-YDSIQKLLN 225 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHh-CCEEEEecCCeEee-cCCHHHHhh
Confidence 9999999999999999999999999864 5799999999999865 99999999999975 688887755
No 406
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.3e-37 Score=349.76 Aligned_cols=201 Identities=23% Similarity=0.359 Sum_probs=171.3
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
-|+++||+|.|.+++++|+|+||+|++|+++||+||||||||||+++|+|++ |++|+|..++. ..++|
T Consensus 349 ~i~~~~vsf~~~~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~ 427 (588)
T PRK11174 349 TIEAEDLEILSPDGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSW 427 (588)
T ss_pred eEEEEeeEEeccCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEE
Confidence 4999999987755568999999999999999999999999999999999999 99999998763 25899
Q ss_pred echhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCcccc----------CCCCCCChhHHHHHHHHHHHccCC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQV----------MPMKNLSDGQRSRVVFAWLAYRQP 504 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----------~~~~~LSgGqkqrv~lAral~~~p 504 (582)
++|++. -++.|+.+++....+..+.+++.++++..++.++... .....||||||||++||||++++|
T Consensus 428 v~Q~~~---LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~ 504 (588)
T PRK11174 428 VGQNPQ---LPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPC 504 (588)
T ss_pred ecCCCc---CCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999863 3567899998765454566777888877766432221 123579999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 505 HMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 505 ~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++|||||||++||.++...+.+.|.++ +.|+|+|||+++.+. .||+|++|++|++++ .|+.+++.+
T Consensus 505 ~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~-~aD~Iivl~~G~i~e-~G~~~eL~~ 572 (588)
T PRK11174 505 QLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLA-QWDQIWVMQDGQIVQ-QGDYAELSQ 572 (588)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHH-hCCEEEEEeCCeEee-cCCHHHHHh
Confidence 999999999999999999999999886 579999999999885 599999999999975 899888764
No 407
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.2e-37 Score=357.14 Aligned_cols=203 Identities=28% Similarity=0.375 Sum_probs=174.9
Q ss_pred CeEEEEEEEEEecC-CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeE
Q 007982 365 PVLQFVEVTFGYTP-DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~-~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~ 432 (582)
..|+++||+|+|++ ++++|+|+||+|++|+.+||+||||||||||+++|+|+++|++|+|..++. ..+
T Consensus 476 ~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i 555 (710)
T TIGR03796 476 GYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSV 555 (710)
T ss_pred CeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhhe
Confidence 35899999999975 367999999999999999999999999999999999999999999998752 358
Q ss_pred EEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHcc
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~ 502 (582)
+|++|++. -++.|+.+++....+..+.+++.++++..|+.+.....| ...||||||||++||||+++
T Consensus 556 ~~v~Q~~~---lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~ 632 (710)
T TIGR03796 556 AMVDQDIF---LFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVR 632 (710)
T ss_pred eEEecCCh---hhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhh
Confidence 99999863 346788898865444456677888888877754332222 35799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|++|||||||++||+++...+.+.|.+.+.|+|+|||+++.+. .||+|++|++|++++ .|+.+++.+
T Consensus 633 ~p~iliLDEptS~LD~~te~~i~~~l~~~~~T~IiitHrl~~i~-~~D~Iivl~~G~i~~-~G~~~~Ll~ 700 (710)
T TIGR03796 633 NPSILILDEATSALDPETEKIIDDNLRRRGCTCIIVAHRLSTIR-DCDEIIVLERGKVVQ-RGTHEELWA 700 (710)
T ss_pred CCCEEEEECccccCCHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEeCCEEEE-ecCHHHHHH
Confidence 99999999999999999999999999988899999999999985 599999999999975 899888764
No 408
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-37 Score=330.00 Aligned_cols=198 Identities=26% Similarity=0.361 Sum_probs=149.4
Q ss_pred eeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee-eechH-HHHHHHHHH-HHhcc--ccCC---Cc
Q 007982 86 DLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV-ISCDE-ERLKLEKEA-EILGA--QEDG---GG 157 (582)
Q Consensus 86 ~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~-i~~~~-~~~~~~~~~-~~~~~--~~~~---~~ 157 (582)
.+|+|+||+|++||+++|+||||||||||+++|+|+.+|+.|.+... ..+.. ....+.... ..+++ |... ..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999998876643210 01100 000111111 12222 2211 12
Q ss_pred chHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCCCCCCCHHHH
Q 007982 158 EQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEAC 235 (582)
Q Consensus 158 ~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~ 235 (582)
...+++.... ..+.......++.++++.+||.+ ..++++.+|||||||||+|||||+.+|++|||||||++||+.++
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~-~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r 200 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLEN-YAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIR 200 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh-hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHH
Confidence 3344443222 22344455677899999999975 56899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 236 VWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 236 ~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
..+.+.|.++ ++|||+||||++++..+||+|++|++|+++ ..|+++++.
T Consensus 201 ~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~-~~g~~~~l~ 253 (400)
T PRK10070 201 TEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVV-QVGTPDEIL 253 (400)
T ss_pred HHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEE-ecCCHHHHH
Confidence 9999988654 679999999999999999999999999997 456666554
No 409
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-37 Score=310.52 Aligned_cols=209 Identities=23% Similarity=0.286 Sum_probs=159.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCCceeeeeechHHHH---HHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS-----DMSSLEAVISCDEERL---KLE 143 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~-----~~~~~~~~i~~~~~~~---~~~ 143 (582)
+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.++ +.|. +.+++... ...
T Consensus 3 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~----i~~~g~~i~~~~~~ 78 (250)
T PRK14247 3 KIEIRDLKVSFGQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGE----VYLDGQDIFKMDVI 78 (250)
T ss_pred eEEEEeeEEEECCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceE----EEECCEECCcCCHH
Confidence 58999999999988999999999999999999999999999999999999764 3332 22222111 011
Q ss_pred HHHHHhcc--ccCC---CcchHHHHHHHHH--cC--ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHH
Q 007982 144 KEAEILGA--QEDG---GGEQLERVYERLE--AL--DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 144 ~~~~~~~~--~~~~---~~~~~~~~~~~l~--~~--~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LA 211 (582)
.....+++ +... .....+++..... .. ......+.+.++++.+|+.. ...++++.+|||||||||+||
T Consensus 79 ~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~la 158 (250)
T PRK14247 79 ELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQRLCIA 158 (250)
T ss_pred HHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHHHHHH
Confidence 11122322 2211 1233333322111 11 22344567889999999853 245788999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||+.+|++|||||||++||+.++.++.+.|+++ +.|+|++|||++++..+||++++|++|+++ ..|+.+++.
T Consensus 159 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~~ 233 (250)
T PRK14247 159 RALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIV-EWGPTREVF 233 (250)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEE-EECCHHHHH
Confidence 9999999999999999999999999999999875 579999999999999999999999999996 457766554
No 410
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=7.5e-38 Score=309.26 Aligned_cols=195 Identities=22% Similarity=0.302 Sum_probs=154.0
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhccc
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILGAQ 152 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 152 (582)
+.++|+++.|+++++|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++....... ....+
T Consensus 23 l~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i----~~~g~~~~~~~--~~~~~- 95 (224)
T cd03220 23 LGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTV----TVRGRVSSLLG--LGGGF- 95 (224)
T ss_pred hhhhhhhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE----EECCEEchhhc--ccccC-
Confidence 788999999999999999999999999999999999999999999999988875543 22222111000 00111
Q ss_pred cCCCcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCCCCCC
Q 007982 153 EDGGGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHL 230 (582)
Q Consensus 153 ~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~~L 230 (582)
.+.....+++.... ........+.++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++|||||||++|
T Consensus 96 -~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 96 -NPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGD-FIDLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred -CCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-hhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 11222333332211 12233444567888999999964 567899999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 231 DLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 231 D~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
|+.++..+.+.|.++ +.|||+|||+++++..+||++++|++|+++.
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 222 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRF 222 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999988765 5799999999999999999999999999863
No 411
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.1e-37 Score=343.00 Aligned_cols=204 Identities=26% Similarity=0.366 Sum_probs=167.8
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCC--CCCCcEEEEcC----------------
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDL--VPLDGMVRRHN---------------- 428 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~--~p~~G~i~~~~---------------- 428 (582)
|+++|++++|+ ++.+|+|+||+|.+|++++|+||||||||||+++|+|++ +|++|+|.+.+
T Consensus 1 l~~~~l~~~~~-~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g 79 (520)
T TIGR03269 1 IEVKNLTKKFD-GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVG 79 (520)
T ss_pred CEEEEEEEEEC-CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccccc
Confidence 57899999996 467999999999999999999999999999999999997 79999997641
Q ss_pred ----------------------------ceeEEEechhhhhhcCCcccHHHHHHhc-----CCCC-hHHHHHHHHHhcCC
Q 007982 429 ----------------------------HLRIAQFHQHLAEKLDMDMSALQYMIKE-----YPGN-EEEKMRAAIGRFGL 474 (582)
Q Consensus 429 ----------------------------~~~~~~~~q~~~~~~~~~~~~~~~~~~~-----~~~~-~~~~~~~~l~~~gl 474 (582)
...++|++|... .+....++.+++... ++.. ..+++.++++.+||
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~-~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl 158 (520)
T TIGR03269 80 EPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTF-ALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQL 158 (520)
T ss_pred cccccccccccccchhhhccCHHHHHHhhhcEEEEecccc-ccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC
Confidence 013678887522 122345666665421 1111 23467889999999
Q ss_pred CCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcC
Q 007982 475 TGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAH 550 (582)
Q Consensus 475 ~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d 550 (582)
.+.. ++++.+|||||||||+|||||+.+|++|||||||++||+.++..+.+.|.++ +.|||+||||++++.++||
T Consensus 159 ~~~~-~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~~~~d 237 (520)
T TIGR03269 159 SHRI-THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIEDLSD 237 (520)
T ss_pred hhhh-hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcC
Confidence 7654 4567899999999999999999999999999999999999999998887654 5799999999999999999
Q ss_pred EEEEEeCCeEEEEcCCHHHHHHHH
Q 007982 551 EIWVCENQAVTRWEGDIMDFKLHL 574 (582)
Q Consensus 551 ~i~~l~~G~i~~~~g~~~~~~~~~ 574 (582)
+|++|++|+++ +.|+++++....
T Consensus 238 ~i~~l~~G~i~-~~g~~~~~~~~~ 260 (520)
T TIGR03269 238 KAIWLENGEIK-EEGTPDEVVAVF 260 (520)
T ss_pred EEEEEeCCEEe-eecCHHHHHHHH
Confidence 99999999997 478988886654
No 412
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-37 Score=315.62 Aligned_cols=207 Identities=23% Similarity=0.336 Sum_probs=159.8
Q ss_pred ceEEeeeEEEECC--eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHH
Q 007982 72 DIRIESLSVTFHG--HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~~--~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~ 146 (582)
+|+++||++.|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++... ......
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~----~~g~~i~~~~~~~~~ 80 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTIT----VGGMVLSEETVWDVR 80 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEE----ECCEECCcCcHHHHh
Confidence 6999999999974 5799999999999999999999999999999999999988766432 222111 011111
Q ss_pred HHhcc--ccC----CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 147 EILGA--QED----GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 147 ~~~~~--~~~----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
..+++ +.. ......+++..... .........++.++++.+||.. ..++++.+|||||||||+|||||+.+|
T Consensus 81 ~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~LS~G~~qrv~laral~~~p 159 (279)
T PRK13635 81 RQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMED-FLNREPHRLSGGQKQRVAIAGVLALQP 159 (279)
T ss_pred hheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChh-hhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 22322 211 01123333322111 2234445667899999999974 578899999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+||||||||++||+.++..+.++|+++ +.|||++|||++++. .||+|++|++|+++ +.|+.+++.
T Consensus 160 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~-~~d~i~~l~~G~i~-~~g~~~~~~ 228 (279)
T PRK13635 160 DIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAA-QADRVIVMNKGEIL-EEGTPEEIF 228 (279)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-cCCEEEEEECCEEE-EECCHHHHh
Confidence 999999999999999999999998764 579999999999997 59999999999996 457766554
No 413
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-37 Score=319.07 Aligned_cols=205 Identities=20% Similarity=0.309 Sum_probs=168.4
Q ss_pred CCeEEEEEEEEEecC-CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc--------
Q 007982 364 PPVLQFVEVTFGYTP-DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH-------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~-~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~-------- 429 (582)
..+|+++|++++|.+ ..++|+|+||+|.+|+++||+||||||||||+++|+|++. |++|+|...+.
T Consensus 78 ~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~ 157 (329)
T PRK14257 78 ANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKIS 157 (329)
T ss_pred CceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 458999999999963 3579999999999999999999999999999999999986 57999876432
Q ss_pred -----eeEEEechhhhhhcCCcccHHHHHHhc--CCCC-hH----HHHHHHHHhcCCCCc---cccCCCCCCChhHHHHH
Q 007982 430 -----LRIAQFHQHLAEKLDMDMSALQYMIKE--YPGN-EE----EKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRV 494 (582)
Q Consensus 430 -----~~~~~~~q~~~~~~~~~~~~~~~~~~~--~~~~-~~----~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv 494 (582)
..++|++|.+. .+..|+.+++... +... .. +.+..+++.+++... ....++.+|||||||||
T Consensus 158 ~~~lr~~i~~v~q~~~---~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~~~~LSgGqkqRl 234 (329)
T PRK14257 158 SLELRTRIGMVFQKPT---PFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKAGNALSGGQQQRL 234 (329)
T ss_pred hHhhhccEEEEecCCc---cCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCCcccCCHHHHHHH
Confidence 24888888753 2346777777521 1111 11 235677888887421 12345689999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 495 VFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 495 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+||||++.+|+||||||||++||+.+...+.+.|+.+ +.|||+|||+++++.++||+|++|++|++++ .|++.++..
T Consensus 235 ~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e-~g~~~~l~~ 313 (329)
T PRK14257 235 CIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEE-AGETKTIFI 313 (329)
T ss_pred HHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHhc
Confidence 9999999999999999999999999999999998876 4799999999999999999999999999975 799998754
No 414
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.6e-37 Score=305.95 Aligned_cols=194 Identities=22% Similarity=0.308 Sum_probs=160.9
Q ss_pred eEEEEEEEEEecCC---ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC---CCCcEEEEcCc--------ee
Q 007982 366 VLQFVEVTFGYTPD---NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV---PLDGMVRRHNH--------LR 431 (582)
Q Consensus 366 ~l~~~~l~~~y~~~---~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~---p~~G~i~~~~~--------~~ 431 (582)
++.++|+++.|++. +++|+|+||+|.+|++++|+||||||||||+++|+|+++ |++|+|...+. ..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKC 82 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhccc
Confidence 56799999999764 579999999999999999999999999999999999999 99999987652 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhc----CCC--C---hHHHHHH-HHHhcCCCCccccCCCCCCChhHHHHHHHHHHHc
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKE----YPG--N---EEEKMRA-AIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~----~~~--~---~~~~~~~-~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~ 501 (582)
++|++|... +....|+.+++... .+. . ....+.+ .++.+++..... +.+.+|||||+|||+|||+|+
T Consensus 83 i~~~~q~~~--~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~LS~G~~qrl~laral~ 159 (226)
T cd03234 83 VAYVRQDDI--LLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGG-NLVKGISGGERRRVSIAVQLL 159 (226)
T ss_pred EEEeCCCCc--cCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhc-ccccCcCHHHHHHHHHHHHHH
Confidence 788888743 33445777766421 111 1 1123444 789999876543 566899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCH-HHHHhhcCEEEEEeCCeEEE
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDF-RLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~-~~~~~~~d~i~~l~~G~i~~ 562 (582)
.+|++|||||||+|||+.++..+.+.|+++ +.|||++||++ +++..+||++++|++|+++.
T Consensus 160 ~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~ 224 (226)
T cd03234 160 WDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVY 224 (226)
T ss_pred hCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEe
Confidence 999999999999999999999999998765 56999999998 68889999999999999964
No 415
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-37 Score=310.13 Aligned_cols=204 Identities=23% Similarity=0.255 Sum_probs=166.0
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~--------- 429 (582)
.++|+++|++++|++ +.+|+|+||+|.+||+++|+|+||||||||+++|+|+++| ++|+|.+.+.
T Consensus 14 ~~~l~~~~l~~~~~~-~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~~~ 92 (265)
T PRK14252 14 QQKSEVNKLNFYYGG-YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSPEV 92 (265)
T ss_pred CceEEEEEEEEEECC-eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccccc
Confidence 467999999999964 5799999999999999999999999999999999999975 7999987431
Q ss_pred ------eeEEEechhhhhhcCCcccHHHHHHhcC--C---C--ChHHHHHHHHHhcCCCC---ccccCCCCCCChhHHHH
Q 007982 430 ------LRIAQFHQHLAEKLDMDMSALQYMIKEY--P---G--NEEEKMRAAIGRFGLTG---KAQVMPMKNLSDGQRSR 493 (582)
Q Consensus 430 ------~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~---~--~~~~~~~~~l~~~gl~~---~~~~~~~~~LSgGqkqr 493 (582)
..++|++|... +.. .++.+++.... . . ...+.+.++++.+++.. .....++.+|||||+||
T Consensus 93 ~~~~~~~~i~~~~q~~~--~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 169 (265)
T PRK14252 93 DPIEVRMRISMVFQKPN--PFP-KSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRLGDLAFNLSGGQQQR 169 (265)
T ss_pred CHHHHhccEEEEccCCc--CCc-chHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHHhCCcccCCHHHHHH
Confidence 23778887743 222 36666664211 1 1 11345677888887742 12235678999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 494 VVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 494 v~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|+|||||+.+|++|||||||+|||+.++..+.+.|.++ +.|||+||||++++.++||++++|++|++.. .|+.+++.
T Consensus 170 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 248 (265)
T PRK14252 170 LCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIE-FGATDTIF 248 (265)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999998876 4689999999999999999999999999974 68887765
Q ss_pred H
Q 007982 572 L 572 (582)
Q Consensus 572 ~ 572 (582)
.
T Consensus 249 ~ 249 (265)
T PRK14252 249 I 249 (265)
T ss_pred h
Confidence 3
No 416
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-37 Score=312.54 Aligned_cols=218 Identities=21% Similarity=0.286 Sum_probs=157.0
Q ss_pred CCCccceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCC-ceeeeeechHHHH-----
Q 007982 67 HPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMS-SLEAVISCDEERL----- 140 (582)
Q Consensus 67 ~~~~~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~-~~~~~i~~~~~~~----- 140 (582)
.|...+|+++|+++.|+++.+|+++||+|++||+++|+||||||||||+++|+|+..+..+ ...|.+.+++...
T Consensus 15 ~~~~~~l~~~nl~~~~~~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~ 94 (274)
T PRK14265 15 NPDHSVFEVEGVKVFYGGFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQI 94 (274)
T ss_pred CCCCceEEEeeEEEEeCCeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccc
Confidence 3445589999999999988999999999999999999999999999999999998642100 0012233322211
Q ss_pred HHHHHHHHhcc--ccCCC--cchHHHHHHHHHcC-ChhHHHHHHHHHHHhCCCC---hhhhhccCCCCChhHHHHHHHHH
Q 007982 141 KLEKEAEILGA--QEDGG--GEQLERVYERLEAL-DASTAEKRAAEILYGLGFN---KTMQAKKTRDFSGGWRMRIALAR 212 (582)
Q Consensus 141 ~~~~~~~~~~~--~~~~~--~~~~~~~~~~l~~~-~~~~~~~~~~~~l~~lgl~---~~~~~~~~~~LSGGqrqRv~LAr 212 (582)
........+++ +.... ....+++....... .....+..+.++++.+++. ....++++.+|||||||||+|||
T Consensus 95 ~~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~LAr 174 (274)
T PRK14265 95 NSVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDKLKEKGTALSGGQQQRLCIAR 174 (274)
T ss_pred hhHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHHhcCCcccCCHHHHHHHHHHH
Confidence 01111122222 21111 12222222111100 0112234566778888763 13457889999999999999999
Q ss_pred HHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEe---------CCeEEEEcCCh
Q 007982 213 ALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQ---------NKQLKFYTGNF 281 (582)
Q Consensus 213 aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~---------~G~i~~~~g~~ 281 (582)
||+.+|++|||||||++||+.++..+.++|.++ +.|||++|||++++..+||++++|+ +|+++. .|+.
T Consensus 175 aL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~-~g~~ 253 (274)
T PRK14265 175 AIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE-FSPT 253 (274)
T ss_pred HHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE-eCCH
Confidence 999999999999999999999999999999876 4799999999999999999999998 799974 5776
Q ss_pred hHHH
Q 007982 282 DQYV 285 (582)
Q Consensus 282 ~~~~ 285 (582)
+++.
T Consensus 254 ~~~~ 257 (274)
T PRK14265 254 EQMF 257 (274)
T ss_pred HHHH
Confidence 6654
No 417
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-37 Score=312.36 Aligned_cols=212 Identities=20% Similarity=0.275 Sum_probs=160.2
Q ss_pred CccceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCCceeeeeechHHHHH--
Q 007982 69 LSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS-----DMSSLEAVISCDEERLK-- 141 (582)
Q Consensus 69 ~~~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~-----~~~~~~~~i~~~~~~~~-- 141 (582)
...+|+++||+++|+++.+|+|+||+|++||+++|+||||||||||+++|+|+.++ +.|. +.+++....
T Consensus 17 ~~~~l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~----i~~~g~~~~~~ 92 (267)
T PRK14237 17 EEIALSTKDLHVYYGKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ----ILYRGIDINRK 92 (267)
T ss_pred CCeEEEEeeEEEEECCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE----EEECCEEcccc
Confidence 34579999999999989999999999999999999999999999999999998753 4333 222221110
Q ss_pred ---HHHHHHHhcc--ccCC--CcchHHHHHHHHH--c-CChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHH
Q 007982 142 ---LEKEAEILGA--QEDG--GGEQLERVYERLE--A-LDASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRI 208 (582)
Q Consensus 142 ---~~~~~~~~~~--~~~~--~~~~~~~~~~~l~--~-~~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv 208 (582)
.......+++ +... .....+++..... . ......+.++.++++.+++.. ...++++.+|||||+|||
T Consensus 93 ~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrl 172 (267)
T PRK14237 93 EINVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHKSALTLSGGQQQRL 172 (267)
T ss_pred cCChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcCCcccCCHHHHHHH
Confidence 1111122222 2111 1123333322111 1 122344567888999998842 346789999999999999
Q ss_pred HHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 209 ALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 209 ~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+|||+++++..+||++++|++|+++. .|+.+++.
T Consensus 173 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 250 (267)
T PRK14237 173 CIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIE-YDKTRNIF 250 (267)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999999999999999876 4699999999999999999999999999974 56666543
No 418
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-37 Score=316.34 Aligned_cols=206 Identities=27% Similarity=0.354 Sum_probs=158.3
Q ss_pred EEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------HHHHH-H
Q 007982 74 RIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------KLEKE-A 146 (582)
Q Consensus 74 ~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~~~~~-~ 146 (582)
.++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++... ..... .
T Consensus 26 ~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i----~i~g~~~~~~~~~~~~~~~~ 101 (269)
T cd03294 26 SKEEILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKV----LIDGQDIAAMSRKELRELRR 101 (269)
T ss_pred hhhhhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEE----EECCEEccccChhhhhhhhc
Confidence 56799999999999999999999999999999999999999999999998876543 2222111 00000 1
Q ss_pred HHhcc--ccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCC
Q 007982 147 EILGA--QEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPT 219 (582)
Q Consensus 147 ~~~~~--~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~ 219 (582)
..+++ +... .....+++.... ..........++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|+
T Consensus 102 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~Gq~qrv~lAral~~~p~ 180 (269)
T cd03294 102 KKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEG-WEHKYPDELSGGMQQRVGLARALAVDPD 180 (269)
T ss_pred CcEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHh-HhhCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 11221 2111 112333332211 12233344567889999999974 5688999999999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 220 ILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 220 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+|||||||++||+.++..+.++|.++ +.|||++|||++++..+||++++|++|+++. .|+.+++.
T Consensus 181 illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 249 (269)
T cd03294 181 ILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQ-VGTPEEIL 249 (269)
T ss_pred EEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999998765 5799999999999999999999999999974 46666553
No 419
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.9e-37 Score=311.34 Aligned_cols=206 Identities=24% Similarity=0.324 Sum_probs=158.5
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHHHh
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAEIL 149 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~ 149 (582)
|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ........+
T Consensus 2 l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~----~~g~~~~~~~~~~~~~~i 77 (256)
T TIGR03873 2 LRLSRVSWSAGGRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVD----LAGVDLHGLSRRARARRV 77 (256)
T ss_pred ceEEeEEEEECCEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEE----ECCEEcccCCHHHHhhhe
Confidence 6899999999999999999999999999999999999999999999999988766432 222111 011111122
Q ss_pred cc--ccCC---CcchHHHHHHHH-H-----cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 150 GA--QEDG---GGEQLERVYERL-E-----ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 150 ~~--~~~~---~~~~~~~~~~~l-~-----~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
++ +... .....+++.... . .........++.++++.+|+. ...++++.+|||||+|||+|||||+.+|
T Consensus 78 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 78 ALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELS-HLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcH-hhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 21 2211 122333332110 0 011223345788999999996 4578899999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
++|||||||++||+.++..+.+.|+++ +.|||++|||++++..+||+|++|++|+++ ..|+.+++
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~g~~~~~ 224 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVV-AAGPPREV 224 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEE-EecCHHHh
Confidence 999999999999999999999998765 579999999999999999999999999997 45666554
No 420
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.6e-38 Score=327.36 Aligned_cols=202 Identities=27% Similarity=0.406 Sum_probs=173.7
Q ss_pred eEEEEEEEEEecCCc-eeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCce-----------eEE
Q 007982 366 VLQFVEVTFGYTPDN-LIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHL-----------RIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~-~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~-----------~~~ 433 (582)
.++++||+|+|++.. ++|+|+||++.+||.+||+|++|||||||+.+|+|.++|++|+|+..+.. .+.
T Consensus 336 ~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~ 415 (573)
T COG4987 336 ALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETIS 415 (573)
T ss_pred eeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHh
Confidence 799999999998654 79999999999999999999999999999999999999999999987632 133
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~~ 503 (582)
.+.|... -+.-|..+++....+..+.+++.++++.+||.+.....| ...|||||+||++|||+|+++
T Consensus 416 vl~Qr~h---lF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~d 492 (573)
T COG4987 416 VLTQRVH---LFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHD 492 (573)
T ss_pred hhccchH---HHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcC
Confidence 3444322 134577788776666677888999999999976554443 468999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
.+++||||||.|||+.+...+.+.|.+. ++|+|+|||++..++ .||||+||++|++++ +|++.++..
T Consensus 493 apl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le-~~drIivl~~Gkiie-~G~~~~Ll~ 561 (573)
T COG4987 493 APLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLE-RMDRIIVLDNGKIIE-EGTHAELLA 561 (573)
T ss_pred CCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHh-hcCEEEEEECCeeee-cCCHHhhhc
Confidence 9999999999999999999999998764 689999999999995 699999999999975 999998876
No 421
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-37 Score=324.10 Aligned_cols=203 Identities=26% Similarity=0.386 Sum_probs=180.5
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeE
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRI 432 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~ 432 (582)
+.-|+|+||+|.|++++++|+++||+|++||.+||+|+|||||||++|+|.+++. .+|+|..+|. ..|
T Consensus 349 ~~~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~I 427 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSI 427 (591)
T ss_pred CCcEEEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhhe
Confidence 3459999999999887779999999999999999999999999999999999999 9999998764 248
Q ss_pred EEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHcc
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~ 502 (582)
|++||+- .-++.|++.++..+.+....+++.++.+++|+.+...+.| ...|||||||||+||||++.
T Consensus 428 g~VPQd~---~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lK 504 (591)
T KOG0057|consen 428 GVVPQDS---VLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLK 504 (591)
T ss_pred eEeCCcc---cccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhc
Confidence 9999974 3467899999987777778889999999999976444333 35799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|+|+++|||||+||.++...+.+.+.+. ++|+|+|-||++++. -||+|+++++|++.+ .|+.+++..
T Consensus 505 da~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~-~~DkI~~l~nG~v~e-~gth~ell~ 574 (591)
T KOG0057|consen 505 DAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLK-DFDKIIVLDNGTVKE-YGTHSELLA 574 (591)
T ss_pred CCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHh-cCCEEEEEECCeeEE-eccHHHHhh
Confidence 99999999999999999999999999874 689999999999995 599999999999976 789988877
No 422
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.1e-37 Score=309.35 Aligned_cols=181 Identities=27% Similarity=0.326 Sum_probs=150.6
Q ss_pred eEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCce------eEEEechhhhhhcCCcccHHHHHHhc
Q 007982 383 YKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHL------RIAQFHQHLAEKLDMDMSALQYMIKE 456 (582)
Q Consensus 383 l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~------~~~~~~q~~~~~~~~~~~~~~~~~~~ 456 (582)
|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.. ..+|++|... +....++.+++...
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~~~--l~~~~tv~e~l~~~ 78 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPDRMVVFQNYS--LLPWLTVRENIALA 78 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhheEEecCcc--cCCCCCHHHHHHHH
Confidence 478999999999999999999999999999999999999999876531 2467888643 33446777766431
Q ss_pred ----CCCC----hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 007982 457 ----YPGN----EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEAL 528 (582)
Q Consensus 457 ----~~~~----~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l 528 (582)
.... ..+.+.++++.+|+.... ++++.+|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l 157 (230)
T TIGR01184 79 VDRVLPDLSKSERRAIVEEHIALVGLTEAA-DKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEEL 157 (230)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHcCCHHHH-cCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHH
Confidence 1111 133578899999998644 4567899999999999999999999999999999999999999999988
Q ss_pred Hhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCH
Q 007982 529 NEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDI 567 (582)
Q Consensus 529 ~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 567 (582)
.++ +.|||+||||++++.++||+|++|++|+++. .|+.
T Consensus 158 ~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~-~~~~ 199 (230)
T TIGR01184 158 MQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAAN-IGQI 199 (230)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEec-ccCc
Confidence 764 5799999999999999999999999999964 4554
No 423
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-37 Score=309.62 Aligned_cols=208 Identities=21% Similarity=0.356 Sum_probs=156.4
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS-----DMSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~-----~~~~~~~~i~~~~~~~-----~ 141 (582)
.|+++||++.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+.++ +.| .+.+++... .
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G----~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 3 KISVKDLDLFYGDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEG----EVLLDGQDIYKSDID 78 (250)
T ss_pred eEEEEEEEEEECCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCce----EEEECCEEccccccc
Confidence 58999999999988999999999999999999999999999999999998642 233 233222111 0
Q ss_pred HHHHHHHhcc--ccCCC--cchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDGG--GEQLERVYERLE--AL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~~--~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LA 211 (582)
.......+++ +.... ....+++..... .. .....++++.++++.+++.. ...++++.+|||||||||+||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la 158 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDRLKKSALGLSGGQQQRLCIA 158 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHHHhcCCCCCCHHHHHHHHHH
Confidence 1111122222 22111 123333322111 11 12344567888899988742 245788999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++
T Consensus 159 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~ 232 (250)
T PRK14240 159 RALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVE-FGDTVDL 232 (250)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEE-eCCHHHH
Confidence 9999999999999999999999999999999876 4799999999999999999999999999975 4665554
No 424
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.6e-37 Score=311.33 Aligned_cols=208 Identities=19% Similarity=0.263 Sum_probs=156.7
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC----CCCceeeeeechHHHHHHHHH-H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS----DMSSLEAVISCDEERLKLEKE-A 146 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~----~~~~~~~~i~~~~~~~~~~~~-~ 146 (582)
+|+++|++++| ++.+|+|+||+|++|++++|+|+||||||||+++|+|+.++ +.|.+ .+++........ .
T Consensus 4 ~l~~~~l~~~~-~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i----~~~g~~i~~~~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRV----LLDGKPVAPCALRG 78 (254)
T ss_pred EEEEeCeEEEe-ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEE----EECCeecccccccc
Confidence 69999999999 67899999999999999999999999999999999999887 54432 222221110000 1
Q ss_pred HHhc--cccCC--C---cchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChh--hhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 147 EILG--AQEDG--G---GEQLERVYERLEALDASTAEKRAAEILYGLGFNKT--MQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 147 ~~~~--~~~~~--~---~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~--~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
..++ ++... . ......+...+........+.++.++++.+++... ..++++.+|||||+|||+|||||+.+
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~LS~Gq~qrv~laral~~~ 158 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAARVLKLYPFEMSGGMLQRMMIALALLCE 158 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChhhhhhcCCcccCHHHHHHHHHHHHHhcC
Confidence 1122 22211 0 11112222211111112234678899999999642 45789999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|++|||||||++||+.++..+.+.|+++ +.|||++||+++++..+||++++|++|+++ ..|+.+++.
T Consensus 159 p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~-~~~~~~~~~ 229 (254)
T PRK10418 159 APFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIV-EQGDVETLF 229 (254)
T ss_pred CCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEE-EecCHHHHh
Confidence 9999999999999999999999988764 579999999999999999999999999996 456666553
No 425
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-37 Score=304.94 Aligned_cols=197 Identities=20% Similarity=0.330 Sum_probs=149.4
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhcc
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILGA 151 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~ 151 (582)
|+++|++++|+++.. |+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++.... .......+++
T Consensus 1 i~~~~l~~~~~~~~~--~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~----~~g~~~~~~~~~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQPM--HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVL----INGVDVTAAPPADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCEec--ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE----ECCEEcCcCCHhHccEEE
Confidence 578999999987653 99999999999999999999999999999999988766432 2221110 0000112222
Q ss_pred --ccCC---CcchHHHHHHHHH-cCC-hhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeec
Q 007982 152 --QEDG---GGEQLERVYERLE-ALD-ASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLD 224 (582)
Q Consensus 152 --~~~~---~~~~~~~~~~~l~-~~~-~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLD 224 (582)
+... .....+++..... ... ....+.++.++++.+|+.+ ..++++.+||||||||++|||||+.+|++||||
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~ia~al~~~p~llllD 153 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAG-LEKRLPGELSGGERQRVALARVLVRDKPVLLLD 153 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHH-HHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 2211 1122233221111 011 1234557889999999974 567899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 225 EPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 225 EPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
|||++||+.++..+.++|+++ +.|+|+||||++++..+||++++|++|+++.
T Consensus 154 EP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~ 209 (211)
T cd03298 154 EPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAA 209 (211)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEee
Confidence 999999999999999998764 5799999999999999999999999999863
No 426
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-37 Score=313.55 Aligned_cols=207 Identities=23% Similarity=0.289 Sum_probs=159.7
Q ss_pred ceEEeeeEEEECC------eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH----
Q 007982 72 DIRIESLSVTFHG------HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK---- 141 (582)
Q Consensus 72 ~i~v~nls~~y~~------~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~---- 141 (582)
+|+++|++++|++ +.+|+|+||+|++|++++|+|+||||||||+++|+|+.+++.|.+. +++....
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~----i~g~~i~~~~~ 79 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVY----VDGLDTSDEEN 79 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE----ECCEecccccc
Confidence 7999999999963 4699999999999999999999999999999999999988766432 2221110
Q ss_pred HHHHHHHhcc--ccCC----CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDG----GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARA 213 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~----~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 213 (582)
.......+++ +.+. .....+++..... .........++.++++.+|+.. ..++++.+|||||||||+||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~LS~G~~qrv~lara 158 (280)
T PRK13633 80 LWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYE-YRRHAPHLLSGGQKQRVAIAGI 158 (280)
T ss_pred HHHHhhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHh-HhhCCcccCCHHHHHHHHHHHH
Confidence 0111122222 2211 0112222221111 2234455677899999999964 5788999999999999999999
Q ss_pred HhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 214 LFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 214 L~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++.. ||++++|++|+++. .|+.+++.
T Consensus 159 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~-~d~v~~l~~G~i~~-~g~~~~~~ 232 (280)
T PRK13633 159 LAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVE-ADRIIVMDSGKVVM-EGTPKEIF 232 (280)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhc-CCEEEEEECCEEEE-ecCHHHHh
Confidence 99999999999999999999999999998764 5799999999999986 99999999999974 57776654
No 427
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-37 Score=310.02 Aligned_cols=209 Identities=20% Similarity=0.349 Sum_probs=157.7
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CCCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA--S---DMSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~--~---~~~~~~~~i~~~~~~~-----~ 141 (582)
.|+++|++++|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+.+ + +.|. +.+++... .
T Consensus 4 ~l~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~----v~~~g~~i~~~~~~ 79 (252)
T PRK14256 4 KVKLEQLNVHFGKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGK----ILLDDTDIYDRGVD 79 (252)
T ss_pred EEEEEEEEEEeCCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceE----EEECCEEcccccCC
Confidence 5899999999998899999999999999999999999999999999999974 3 2332 22222111 0
Q ss_pred HHHHHHHhc--cccCC---CcchHHHHHHHHH--c-CChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHH
Q 007982 142 LEKEAEILG--AQEDG---GGEQLERVYERLE--A-LDASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 142 ~~~~~~~~~--~~~~~---~~~~~~~~~~~l~--~-~~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~L 210 (582)
.......++ ++... .....+++..... . ......+.++.++++.+++.. ...++.+.+|||||||||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl~l 159 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKSNAMELSGGQQQRLCI 159 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHHHH
Confidence 011111222 22211 1122333321111 1 223344567888999999853 23567899999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
||||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 160 aral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 235 (252)
T PRK14256 160 ARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVE-CGETKKIF 235 (252)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999876 5799999999999999999999999999974 46665543
No 428
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3e-37 Score=301.32 Aligned_cols=186 Identities=25% Similarity=0.350 Sum_probs=155.2
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCce--------eEEEech
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHL--------RIAQFHQ 437 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~--------~~~~~~q 437 (582)
+|+++|+++.|++ ..+++|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+.. .++|++|
T Consensus 2 ~l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (207)
T PRK13539 2 MLEGEDLACVRGG-RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDDPDVAEACHYLGH 80 (207)
T ss_pred EEEEEeEEEEECC-eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcchhhHhhcEEecC
Confidence 6899999999964 579999999999999999999999999999999999999999999876531 3566665
Q ss_pred hhhhhcCCcccHHHHHHhc--CCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCC
Q 007982 438 HLAEKLDMDMSALQYMIKE--YPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNH 515 (582)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~ 515 (582)
... +....++.+++... ......+.+.++++.+|+.... +.++.+|||||+||++||||++.+|++|||||||+|
T Consensus 81 ~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~ 157 (207)
T PRK13539 81 RNA--MKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAPLA-HLPFGYLSAGQKRRVALARLLVSNRPIWILDEPTAA 157 (207)
T ss_pred CCc--CCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-cCChhhcCHHHHHHHHHHHHHhcCCCEEEEeCCccc
Confidence 432 33446777765321 1122345688999999997644 567789999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeC
Q 007982 516 LDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCEN 557 (582)
Q Consensus 516 LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~ 557 (582)
||+.++..+.+.|+++ +.|||+||||.+++.. |+++.++.
T Consensus 158 LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~--~~~~~~~~ 200 (207)
T PRK13539 158 LDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG--ARELDLGP 200 (207)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc--CcEEeecC
Confidence 9999999999998865 6799999999999976 89888743
No 429
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.3e-37 Score=297.17 Aligned_cols=171 Identities=31% Similarity=0.497 Sum_probs=141.0
Q ss_pred EEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH---HHHHHHHhc
Q 007982 74 RIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK---LEKEAEILG 150 (582)
Q Consensus 74 ~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~ 150 (582)
+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++.... .......++
T Consensus 1 ~~~~l~~~~~~~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v----~~~g~~~~~~~~~~~~~~i~ 76 (180)
T cd03214 1 EVENLSVGYGGRTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEI----LLDGKDLASLSPKELARKIA 76 (180)
T ss_pred CeeEEEEEECCeeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEE----EECCEECCcCCHHHHHHHHh
Confidence 46899999998889999999999999999999999999999999999998876643 22221110 000000000
Q ss_pred cccCCCcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCCCCCC
Q 007982 151 AQEDGGGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHL 230 (582)
Q Consensus 151 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~~L 230 (582)
.+.++++.+|+.+ ..++++.+|||||+||++|||||+.+|++|||||||++|
T Consensus 77 ---------------------------~~~q~l~~~gl~~-~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~L 128 (180)
T cd03214 77 ---------------------------YVPQALELLGLAH-LADRPFNELSGGERQRVLLARALAQEPPILLLDEPTSHL 128 (180)
T ss_pred ---------------------------HHHHHHHHcCCHh-HhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCC
Confidence 0111788889974 467889999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 231 DLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 231 D~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
|+.++.++.+.|.++ +.|+|++||+++++..+||++++|++|+++.
T Consensus 129 D~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 178 (180)
T cd03214 129 DIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVA 178 (180)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999998765 5699999999999999999999999999863
No 430
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-36 Score=307.93 Aligned_cols=204 Identities=22% Similarity=0.270 Sum_probs=169.2
Q ss_pred CCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCC-----CCcEEEEcCc---------
Q 007982 364 PPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVP-----LDGMVRRHNH--------- 429 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p-----~~G~i~~~~~--------- 429 (582)
++++.++++++.|+ +..+|+|+||+|.+|++++|+|+||||||||+++|+|+++| ++|+|.+.+.
T Consensus 6 ~~~~~~~~~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 6 PIVMDCKLDKIFYG-NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred CceEEEEeEEEEeC-CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 57799999999996 46799999999999999999999999999999999999986 7999987542
Q ss_pred ----eeEEEechhhhhhcCCcccHHHHHHhcC-----CCChHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHHH
Q 007982 430 ----LRIAQFHQHLAEKLDMDMSALQYMIKEY-----PGNEEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 430 ----~~~~~~~q~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~lA 497 (582)
..++|++|... + +..++.+++.... .....+.+.++++.+++... ....++.+|||||+||++||
T Consensus 85 ~~~~~~i~~v~q~~~--~-~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~G~~qrv~la 161 (261)
T PRK14263 85 VVVRRYIGMVFQQPN--P-FSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDKLKVSGLSLSGGQQQRLCIA 161 (261)
T ss_pred HhhhhceEEEecCCc--c-ccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHH
Confidence 13788888753 2 2467777764321 11123567889999998542 12346689999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEe--------CCeEEEEcCCH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCE--------NQAVTRWEGDI 567 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~--------~G~i~~~~g~~ 567 (582)
|||+.+|++|||||||+|||+.++..+.+.|+++ +.|||++|||++++.++||+|++|+ +|+++. .|+.
T Consensus 162 ral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~-~g~~ 240 (261)
T PRK14263 162 RAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVE-MGPT 240 (261)
T ss_pred HHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEE-eCCH
Confidence 9999999999999999999999999999999876 4689999999999999999999996 899975 7888
Q ss_pred HHHHH
Q 007982 568 MDFKL 572 (582)
Q Consensus 568 ~~~~~ 572 (582)
+++.+
T Consensus 241 ~~~~~ 245 (261)
T PRK14263 241 AQIFQ 245 (261)
T ss_pred HHHHh
Confidence 87754
No 431
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-37 Score=311.47 Aligned_cols=208 Identities=19% Similarity=0.314 Sum_probs=154.2
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCCceeeeeechHHHH-----
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA-----SDMSSLEAVISCDEERL----- 140 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~-----~~~~~~~~~i~~~~~~~----- 140 (582)
.+|+++||+++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+ ++.|. +.+++...
T Consensus 12 ~~l~i~nl~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~----v~~~g~~i~~~~~ 87 (269)
T PRK14259 12 IIISLQNVTISYGTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGR----VLFDGTDLYDPRV 87 (269)
T ss_pred ceEEEEeEEEEECCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceE----EEECCEEcccccC
Confidence 37999999999999899999999999999999999999999999999999875 34333 22222111
Q ss_pred HHHHHHHHhccccCC-CcchHHHHHHHHH------cCChhHHHHHHHHHHHhCCCC---hhhhhccCCCCChhHHHHHHH
Q 007982 141 KLEKEAEILGAQEDG-GGEQLERVYERLE------ALDASTAEKRAAEILYGLGFN---KTMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 141 ~~~~~~~~~~~~~~~-~~~~~~~~~~~l~------~~~~~~~~~~~~~~l~~lgl~---~~~~~~~~~~LSGGqrqRv~L 210 (582)
........+++.++. .... ..+.+.+. ... ...+.++.++++.+++. ....++++.+|||||||||+|
T Consensus 88 ~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrl~l 165 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARINGYT-GDMDELVERSLRKAAVWDECKDKLNESGYSLSGGQQQRLCI 165 (269)
T ss_pred CHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcCCc-HHHHHHHHHHHHHhCCcchhhhhhCCCcccCCHHHHHHHHH
Confidence 011111223221111 1111 12333221 111 22345677788888763 234578899999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeC-----------CeEEEE
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQN-----------KQLKFY 277 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~-----------G~i~~~ 277 (582)
||||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++ |+++ .
T Consensus 166 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~-~ 244 (269)
T PRK14259 166 ARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLV-E 244 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEE-E
Confidence 99999999999999999999999999999999876 46999999999999999999999996 4455 4
Q ss_pred cCChhHHH
Q 007982 278 TGNFDQYV 285 (582)
Q Consensus 278 ~g~~~~~~ 285 (582)
.|+..++.
T Consensus 245 ~~~~~~~~ 252 (269)
T PRK14259 245 FNETKKIF 252 (269)
T ss_pred eCCHHHHH
Confidence 56665554
No 432
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-37 Score=309.54 Aligned_cols=208 Identities=24% Similarity=0.368 Sum_probs=156.4
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA-----SDMSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~-----~~~~~~~~~i~~~~~~~-----~ 141 (582)
+|+++|++++|+++.+|+++||+|++||+++|+|+||||||||+++|+|+.+ ++.|. +.+++... .
T Consensus 4 ~l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~----v~i~g~~~~~~~~~ 79 (251)
T PRK14251 4 IISAKDVHLSYGNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGE----IKFEGQNIYGSKMD 79 (251)
T ss_pred eEEEEeeEEEECCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceE----EEECCEEcccccch
Confidence 6899999999998899999999999999999999999999999999999975 23332 22222111 1
Q ss_pred HHHHHHHhcc--ccCC--CcchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCC---hhhhhccCCCCChhHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDG--GGEQLERVYERLE--AL-DASTAEKRAAEILYGLGFN---KTMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~--~~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~---~~~~~~~~~~LSGGqrqRv~LA 211 (582)
.......+++ +... .....+++..... .. ........+.++++.+++. ....++++.+|||||+||++||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la 159 (251)
T PRK14251 80 LVELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNLDRNAQAFSGGQQQRICIA 159 (251)
T ss_pred HHHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHhccChhhCCHHHHHHHHHH
Confidence 1111112222 2111 1123333321111 11 1223345678889999983 1335778999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++|+++. .|+.+++
T Consensus 160 ral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 233 (251)
T PRK14251 160 RALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIE-AGPTEEM 233 (251)
T ss_pred HHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEE-eCCHHHH
Confidence 9999999999999999999999999999999876 5799999999999999999999999999975 4555544
No 433
>COG1119 ModF ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.2e-38 Score=299.74 Aligned_cols=200 Identities=27% Similarity=0.417 Sum_probs=167.1
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------e
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------L 430 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~ 430 (582)
.+++|+++|+++.|. ++++|+|+||+|++||.++|+|||||||||||++++|.+.|++|.+...++ .
T Consensus 28 ~~~li~l~~v~v~r~-gk~iL~~isW~V~~ge~W~I~G~NGsGKTTLL~ll~~~~~pssg~~~~~G~~~G~~~~~~elrk 106 (257)
T COG1119 28 NEPLIELKNVSVRRN-GKKILGDLSWQVNPGEHWAIVGPNGAGKTTLLSLLTGEHPPSSGDVTLLGRRFGKGETIFELRK 106 (257)
T ss_pred CcceEEecceEEEEC-CEeeccccceeecCCCcEEEECCCCCCHHHHHHHHhcccCCCCCceeeeeeeccCCcchHHHHH
Confidence 457899999999996 478999999999999999999999999999999999999999999875443 2
Q ss_pred eEEEechhhhhhcCCcccHHHHHHhc-------CC----CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHH
Q 007982 431 RIAQFHQHLAEKLDMDMSALQYMIKE-------YP----GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWL 499 (582)
Q Consensus 431 ~~~~~~q~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAra 499 (582)
+||++...+...+....++.+.+... +. ..+.+++..+++.+|+.+. .++|+.+||-||||||.||||
T Consensus 107 ~IG~vS~~L~~~~~~~~~v~dvVlSg~~~siG~y~~~~~~~~~~~a~~lle~~g~~~l-a~r~~~~LS~Ge~rrvLiaRA 185 (257)
T COG1119 107 RIGLVSSELHERFRVRETVRDVVLSGFFASIGIYQEDLTAEDLAAAQWLLELLGAKHL-ADRPFGSLSQGEQRRVLIARA 185 (257)
T ss_pred HhCccCHHHHhhcccccccceeeeecccccccccccCCCHHHHHHHHHHHHHcchhhh-ccCchhhcCHhHHHHHHHHHH
Confidence 46776655554444444555544322 11 1234568889999999874 467899999999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHHHHHHHHHHHhcC-----ceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcC
Q 007982 500 AYRQPHMLLLDEPTNHLDIETIDSLAEALNEWD-----GGLVLVSHDFRLINQVAHEIWVCENQAVTRWEG 565 (582)
Q Consensus 500 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~-----~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g 565 (582)
|+.+|.+|||||||+|||...++.+.+.|.+.. .++|+|||..+++..+.++++.+++|+++ +.|
T Consensus 186 Lv~~P~LLiLDEP~~GLDl~~re~ll~~l~~~~~~~~~~~ll~VtHh~eEi~~~~th~lll~~g~v~-~~g 255 (257)
T COG1119 186 LVKDPELLILDEPAQGLDLIAREQLLNRLEELAASPGAPALLFVTHHAEEIPPCFTHRLLLKEGEVV-AQG 255 (257)
T ss_pred HhcCCCEEEecCccccCChHHHHHHHHHHHHHhcCCCCceEEEEEcchhhcccccceEEEeeCCcee-ecc
Confidence 999999999999999999999999999888762 46999999999999999999999999996 344
No 434
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.2e-37 Score=293.16 Aligned_cols=163 Identities=31% Similarity=0.459 Sum_probs=137.6
Q ss_pred EEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc----------eeEEEe
Q 007982 367 LQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH----------LRIAQF 435 (582)
Q Consensus 367 l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~----------~~~~~~ 435 (582)
|+++|+++.|++. .++++|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|+
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~~ 80 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISVL 80 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEEE
Confidence 4789999999753 36999999999999999999999999999999999999999999987653 124555
Q ss_pred chhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCC
Q 007982 436 HQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNH 515 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~ 515 (582)
+|.+. +. ..++.+++ +..|||||+|||+||||++.+|++|||||||++
T Consensus 81 ~q~~~--~~-~~tv~~~i-----------------------------~~~LS~G~~qrv~laral~~~p~~lllDEP~~~ 128 (178)
T cd03247 81 NQRPY--LF-DTTLRNNL-----------------------------GRRFSGGERQRLALARILLQDAPIVLLDEPTVG 128 (178)
T ss_pred ccCCe--ee-cccHHHhh-----------------------------cccCCHHHHHHHHHHHHHhcCCCEEEEECCccc
Confidence 55431 11 11222221 468999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEE
Q 007982 516 LDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 516 LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~ 562 (582)
||+.+++.+.+.|.++ +.|||++|||++++. .||++++|++|++..
T Consensus 129 LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~d~~~~l~~g~i~~ 176 (178)
T cd03247 129 LDPITERQLLSLIFEVLKDKTLIWITHHLTGIE-HMDKILFLENGKIIM 176 (178)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH-hCCEEEEEECCEEEe
Confidence 9999999999999876 578999999999996 699999999999863
No 435
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2.6e-37 Score=293.24 Aligned_cols=158 Identities=32% Similarity=0.512 Sum_probs=132.9
Q ss_pred EEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 367 LQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 367 l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
|+++|++++|++. .++++++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 4689999999642 46999999999999999999999999999999999999999999987652 12455
Q ss_pred echhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTN 514 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~ 514 (582)
++|... +. ..++.+++ |||||+|||+|||||+.+|++|||||||+
T Consensus 81 ~~q~~~--~~-~~tv~~~l--------------------------------LS~G~~qrv~la~al~~~p~~lllDEPt~ 125 (173)
T cd03246 81 LPQDDE--LF-SGSIAENI--------------------------------LSGGQRQRLGLARALYGNPRILVLDEPNS 125 (173)
T ss_pred ECCCCc--cc-cCcHHHHC--------------------------------cCHHHHHHHHHHHHHhcCCCEEEEECCcc
Confidence 554431 11 11222221 99999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeE
Q 007982 515 HLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAV 560 (582)
Q Consensus 515 ~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i 560 (582)
+||+.++..+.+.|+++ +.|||+||||++++ .+||++++|++|++
T Consensus 126 ~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~-~~~d~v~~l~~G~i 173 (173)
T cd03246 126 HLDVEGERALNQAIAALKAAGATRIVIAHRPETL-ASADRILVLEDGRV 173 (173)
T ss_pred ccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHH-HhCCEEEEEECCCC
Confidence 99999999999998765 46999999999998 58999999999874
No 436
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.4e-37 Score=303.80 Aligned_cols=199 Identities=25% Similarity=0.366 Sum_probs=148.5
Q ss_pred ceEEeeeEEEECC--eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHH
Q 007982 72 DIRIESLSVTFHG--HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~~--~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~ 146 (582)
.|+++|+++.|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ......
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~----~~g~~~~~~~~~~~~ 77 (220)
T cd03245 2 RIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVL----LDGTDIRQLDPADLR 77 (220)
T ss_pred eEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEE----ECCEEhHHCCHHHHH
Confidence 4889999999975 5799999999999999999999999999999999999888766432 222111 011111
Q ss_pred HHhccccCCCcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhcc-----------CCCCChhHHHHHHHHHHHh
Q 007982 147 EILGAQEDGGGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKK-----------TRDFSGGWRMRIALARALF 215 (582)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~-----------~~~LSGGqrqRv~LAraL~ 215 (582)
..+++..+........+.+.+...........+.++++.+++.+ ..++. +.+|||||||||+|||||+
T Consensus 78 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~ 156 (220)
T cd03245 78 RNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTD-FVNKHPNGLDLQIGERGRGLSGGQRQAVALARALL 156 (220)
T ss_pred hhEEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHH-HHHhccccccceecCCCccCCHHHHHHHHHHHHHh
Confidence 22322221111111234444321111111345667888888864 34444 4699999999999999999
Q ss_pred cCCCceeecCCCCCCCHHHHHHHHHHHhhcC--cEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 216 INPTILLLDEPTNHLDLEACVWLEETLKKFD--RILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 216 ~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~~--~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
.+|++|||||||++||+.++..+.+.|+++. .|||++|||++++ .+||++++|++|+++.
T Consensus 157 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~-~~~d~v~~l~~g~i~~ 218 (220)
T cd03245 157 NDPPILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLL-DLVDRIIVMDSGRIVA 218 (220)
T ss_pred cCCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HhCCEEEEEeCCeEee
Confidence 9999999999999999999999999998763 6999999999987 6999999999999863
No 437
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=9.6e-38 Score=308.38 Aligned_cols=200 Identities=27% Similarity=0.368 Sum_probs=154.0
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhcc-
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILGA- 151 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~- 151 (582)
|+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++....... ...+.+
T Consensus 1 l~l~~v~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i----~~~~~~~~~~~-~~~~~~~ 75 (223)
T TIGR03740 1 LETKNLSKRFGKQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEI----IFDGHPWTRKD-LHKIGSL 75 (223)
T ss_pred CEEEeEEEEECCEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE----EECCEeccccc-cccEEEE
Confidence 578999999998899999999999999999999999999999999999988876543 22221111000 111221
Q ss_pred -ccCC---CcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCCC
Q 007982 152 -QEDG---GGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPT 227 (582)
Q Consensus 152 -~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt 227 (582)
+... .....+++......... .+.++.++++.+|+.+ ..++++.+|||||+||++|||||+.+|++|||||||
T Consensus 76 ~q~~~~~~~~t~~~~~~~~~~~~~~--~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~~rv~laral~~~p~llllDEP~ 152 (223)
T TIGR03740 76 IESPPLYENLTARENLKVHTTLLGL--PDSRIDEVLNIVDLTN-TGKKKAKQFSLGMKQRLGIAIALLNHPKLLILDEPT 152 (223)
T ss_pred cCCCCccccCCHHHHHHHHHHHcCC--CHHHHHHHHHHcCCcH-HHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 1111 11223333211111111 1346788999999975 568899999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCCh
Q 007982 228 NHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNF 281 (582)
Q Consensus 228 ~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 281 (582)
++||+.++..+.++|+++ +.|||++|||++++..+||++++|++|+++. .|+.
T Consensus 153 ~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~-~~~~ 208 (223)
T TIGR03740 153 NGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGY-QGKI 208 (223)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEE-ecCh
Confidence 999999999999999765 5699999999999999999999999999975 4544
No 438
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-37 Score=307.96 Aligned_cols=189 Identities=21% Similarity=0.281 Sum_probs=154.2
Q ss_pred CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCcccHHHHHHhc--
Q 007982 379 DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMDMSALQYMIKE-- 456 (582)
Q Consensus 379 ~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~-- 456 (582)
.+++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ++++.|.. .+....++.+++...
T Consensus 36 ~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p~~G~I~~~g~--~~~~~~~~--~~~~~~tv~enl~~~~~ 111 (264)
T PRK13546 36 TFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSPTVGKVDRNGE--VSVIAISA--GLSGQLTGIENIEFKML 111 (264)
T ss_pred ceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCE--EeEEeccc--CCCCCCcHHHHHHHHHH
Confidence 346899999999999999999999999999999999999999999998764 34444442 123345666665321
Q ss_pred ---CCCC-hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc-
Q 007982 457 ---YPGN-EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW- 531 (582)
Q Consensus 457 ---~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~- 531 (582)
+... ..+.+..++..+++.... +.++.+|||||+|||+||||++.+|++|||||||+|||+.++..+.+.|.++
T Consensus 112 ~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~~~~~l~~~L~~~~ 190 (264)
T PRK13546 112 CMGFKRKEIKAMTPKIIEFSELGEFI-YQPVKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQTFAQKCLDKIYEFK 190 (264)
T ss_pred HcCCCHHHHHHHHHHHHHHcCCchhh-cCCcccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHHH
Confidence 1111 123355678888987654 4567899999999999999999999999999999999999999999988765
Q ss_pred --CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 532 --DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 532 --~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
+.|||+||||++++..+||+|++|++|++. +.|+.+++...
T Consensus 191 ~~g~tiIiisH~~~~i~~~~d~i~~l~~G~i~-~~g~~~~~~~~ 233 (264)
T PRK13546 191 EQNKTIFFVSHNLGQVRQFCTKIAWIEGGKLK-DYGELDDVLPK 233 (264)
T ss_pred HCCCEEEEEcCCHHHHHHHcCEEEEEECCEEE-EeCCHHHHHHH
Confidence 679999999999999999999999999997 57888776553
No 439
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-37 Score=308.81 Aligned_cols=209 Identities=19% Similarity=0.286 Sum_probs=157.3
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCCceeeeeechHHHH-----
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS-----DMSSLEAVISCDEERL----- 140 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~-----~~~~~~~~i~~~~~~~----- 140 (582)
.+|+++|+++.|+++.+|+|+||+|++||+++|+|+||||||||+++|+|+.++ +.|. +.+++...
T Consensus 3 ~~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~----i~~~g~~i~~~~~ 78 (251)
T PRK14270 3 IKMESKNLNLWYGEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGE----VLLDGKNIYDKDV 78 (251)
T ss_pred cEEEEEEeEEEECCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccE----EEECCEecccccc
Confidence 378999999999988999999999999999999999999999999999998754 3332 22222111
Q ss_pred HHHHHHHHhcc--ccCC--CcchHHHHHHHH--HcC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHH
Q 007982 141 KLEKEAEILGA--QEDG--GGEQLERVYERL--EAL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 141 ~~~~~~~~~~~--~~~~--~~~~~~~~~~~l--~~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~L 210 (582)
........+++ +... .....+++.... ... .......++.++++.+|+.. ...++++.+|||||||||+|
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 158 (251)
T PRK14270 79 DVVELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDLKKSALKLSGGQQQRLCI 158 (251)
T ss_pred cHHHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHhhCCcccCCHHHHHHHHH
Confidence 00111122222 2211 122233332111 111 12334556788999998742 24578899999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
||||+.+|++|||||||++||+.++.++.+.|+++ +.|+|+|||+++++..+||++++|++|+++. .|+.++.
T Consensus 159 aral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~-~~~~~~~ 233 (251)
T PRK14270 159 ARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIE-FNKTEKI 233 (251)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEE-eCCHHHH
Confidence 99999999999999999999999999999999876 4799999999999999999999999999975 4665554
No 440
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-37 Score=311.82 Aligned_cols=213 Identities=20% Similarity=0.340 Sum_probs=157.0
Q ss_pred CCccceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCCceeeeeechHHHH--
Q 007982 68 PLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA-----SDMSSLEAVISCDEERL-- 140 (582)
Q Consensus 68 ~~~~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~-----~~~~~~~~~i~~~~~~~-- 140 (582)
|...+|+++|+++.|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+.+ ++.|. +.+++...
T Consensus 20 ~~~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~----i~~~g~~~~~ 95 (271)
T PRK14238 20 PKKVVFDTQNLNLWYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGK----ILYRDQNIFD 95 (271)
T ss_pred CCceEEEEeeeEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCcee----EEECCEEccc
Confidence 34457999999999998889999999999999999999999999999999999875 34343 22222111
Q ss_pred ---HHHHHHHHhcc--ccCCC--cchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCC---hhhhhccCCCCChhHHHH
Q 007982 141 ---KLEKEAEILGA--QEDGG--GEQLERVYERLE--AL-DASTAEKRAAEILYGLGFN---KTMQAKKTRDFSGGWRMR 207 (582)
Q Consensus 141 ---~~~~~~~~~~~--~~~~~--~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~---~~~~~~~~~~LSGGqrqR 207 (582)
........+++ +.... ....+++..... .. +....+..+.++++.+++. ....++++.+||||||||
T Consensus 96 ~~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qr 175 (271)
T PRK14238 96 KSYSVEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQR 175 (271)
T ss_pred ccccHHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHH
Confidence 01111122322 22111 122333321111 11 1122345567777777532 124578899999999999
Q ss_pred HHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 208 IALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 208 v~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|+|||||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 176 v~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~-~g~~~~~~ 254 (271)
T PRK14238 176 LCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNE-YDDTDKIF 254 (271)
T ss_pred HHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 99999999999999999999999999999999999876 5799999999999999999999999999975 46665543
No 441
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-37 Score=311.90 Aligned_cols=219 Identities=23% Similarity=0.346 Sum_probs=161.6
Q ss_pred cccccCCCccceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCCceeeeeech
Q 007982 62 GVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS-----DMSSLEAVISCD 136 (582)
Q Consensus 62 g~~~~~~~~~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~-----~~~~~~~~i~~~ 136 (582)
||.-......+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.++ +.|. +.++
T Consensus 15 ~~~~~~~~~~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~----i~i~ 90 (272)
T PRK14236 15 DVLNLSDEQTALEVRNLNLFYGDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGE----IRLD 90 (272)
T ss_pred cccccCCCCcEEEEEEEEEEECCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceE----EEEC
Confidence 444444445589999999999988999999999999999999999999999999999999763 3333 2222
Q ss_pred HHHH-----HHHHHHHHhc--cccCCC--cchHHHHHHHH--HcC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCC
Q 007982 137 EERL-----KLEKEAEILG--AQEDGG--GEQLERVYERL--EAL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFS 201 (582)
Q Consensus 137 ~~~~-----~~~~~~~~~~--~~~~~~--~~~~~~~~~~l--~~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LS 201 (582)
+... ........+. ++.... ....+++.... ... .....+.++.++++.+++.. ...++++.+||
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS 170 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHENAFGLS 170 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhCCcccCC
Confidence 2111 0111111222 121111 12233332111 111 12223456788899998853 24578899999
Q ss_pred hhHHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcC
Q 007982 202 GGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTG 279 (582)
Q Consensus 202 GGqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g 279 (582)
|||||||+|||||+.+|++|||||||++||+.++.++.++|+++ +.|+|++||+++++..+||++++|++|+++. .|
T Consensus 171 ~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g 249 (272)
T PRK14236 171 GGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVE-YG 249 (272)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEe-cC
Confidence 99999999999999999999999999999999999999999876 4799999999999999999999999999974 56
Q ss_pred ChhHHH
Q 007982 280 NFDQYV 285 (582)
Q Consensus 280 ~~~~~~ 285 (582)
+.+++.
T Consensus 250 ~~~~~~ 255 (272)
T PRK14236 250 DTDTLF 255 (272)
T ss_pred CHHHHh
Confidence 666543
No 442
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.3e-37 Score=306.03 Aligned_cols=198 Identities=21% Similarity=0.304 Sum_probs=149.8
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAEI 148 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~ 148 (582)
+|+++||++.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+.+++.|.+. +++... ........
T Consensus 7 ~i~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~----~~g~~~~~~~~~~~~~~ 82 (225)
T PRK10247 7 LLQLQNVGYLAGDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLL----FEGEDISTLKPEIYRQQ 82 (225)
T ss_pred eEEEeccEEeeCCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEE----ECCEEcCcCCHHHHHhc
Confidence 69999999999988999999999999999999999999999999999999888766432 111110 01111122
Q ss_pred hcc--ccCCC--cchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeec
Q 007982 149 LGA--QEDGG--GEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLD 224 (582)
Q Consensus 149 ~~~--~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLD 224 (582)
+++ +.... ....+++............+.++.++++.+|+.....++++.+|||||+|||+|||||+.+|++||||
T Consensus 83 i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllD 162 (225)
T PRK10247 83 VSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFMPKVLLLD 162 (225)
T ss_pred cEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 222 22111 12222222111111111224567889999999644568899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEe--CCeE
Q 007982 225 EPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQ--NKQL 274 (582)
Q Consensus 225 EPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~--~G~i 274 (582)
|||++||+.++..+.++|.++ +.|||++|||++++. .||++++|+ .|++
T Consensus 163 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~-~~d~i~~l~~~~~~~ 217 (225)
T PRK10247 163 EITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEIN-HADKVITLQPHAGEM 217 (225)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHH-hCCEEEEEecccchH
Confidence 999999999999999988764 579999999999996 699999996 4554
No 443
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-37 Score=293.60 Aligned_cols=161 Identities=32% Similarity=0.450 Sum_probs=133.0
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCce-------------eEE
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHL-------------RIA 433 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~-------------~~~ 433 (582)
|+++|+++.|++ +++++++||+|.+|++++|+||||||||||+++|+|+++|++|+|...+.. .++
T Consensus 1 i~~~~l~~~~~~-~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~ 79 (178)
T cd03229 1 LELKNVSKRYGQ-KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRIG 79 (178)
T ss_pred CEEEEEEEEECC-eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcEE
Confidence 468999999964 679999999999999999999999999999999999999999999876531 233
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPT 513 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt 513 (582)
|++|... +....++.+++. + .|||||+||++|||||+.+|++|||||||
T Consensus 80 ~~~q~~~--~~~~~t~~~~l~-------------------~----------~lS~G~~qr~~la~al~~~p~llilDEP~ 128 (178)
T cd03229 80 MVFQDFA--LFPHLTVLENIA-------------------L----------GLSGGQQQRVALARALAMDPDVLLLDEPT 128 (178)
T ss_pred EEecCCc--cCCCCCHHHhee-------------------e----------cCCHHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 4443321 111122222111 0 09999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCe
Q 007982 514 NHLDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQA 559 (582)
Q Consensus 514 ~~LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~ 559 (582)
+|||+.++..+.+.|+++ +.|+|+||||++++..+||++++|++|+
T Consensus 129 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 129 SALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 999999999999988764 5799999999999999999999999884
No 444
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.9e-38 Score=291.48 Aligned_cols=210 Identities=26% Similarity=0.374 Sum_probs=165.0
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHH---HHHHHHHH-
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEER---LKLEKEAE- 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~- 147 (582)
.+.++||.|+|+.+.+++++||+|++||++||+|||||||||.+.++.|+.+++.|.+ ..+... ........
T Consensus 4 ~L~a~~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i----~ld~~diT~lPm~~RArl 79 (243)
T COG1137 4 TLVAENLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKI----LLDDEDITKLPMHKRARL 79 (243)
T ss_pred EEEehhhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceE----EECCcccccCChHHHhhc
Confidence 5889999999999999999999999999999999999999999999999999987653 222222 12222211
Q ss_pred Hhcc--ccCC---CcchHHHHHHHHHcC--Chh--HHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 148 ILGA--QEDG---GGEQLERVYERLEAL--DAS--TAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 148 ~~~~--~~~~---~~~~~~~~~~~l~~~--~~~--~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
-+++ |... ..++.+++...++.. +.+ +.+.++.++|+.|++.+ ..+.+..+||||||+|+.|||||+.+|
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~h-lr~~~a~sLSGGERRR~EIARaLa~~P 158 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITH-LRDSKAYSLSGGERRRVEIARALAANP 158 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHH-HhcCcccccccchHHHHHHHHHHhcCC
Confidence 1222 2111 123334444433322 223 33345779999999975 678999999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhh---cCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHHh
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKK---FDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQT 287 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~---~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 287 (582)
+++|||||++|+||.+...+.++++. .+..|+++.|+..+...+|||.+++.+|++. ..|+++++..+
T Consensus 159 ~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vl-a~G~p~ei~~n 229 (243)
T COG1137 159 KFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVL-AEGSPEEIVNN 229 (243)
T ss_pred CEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEE-ecCCHHHHhcC
Confidence 99999999999999998888777654 4779999999999999999999999999996 57898887653
No 445
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-37 Score=308.12 Aligned_cols=212 Identities=21% Similarity=0.327 Sum_probs=156.6
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCC-ceeeeeechHHHH----HHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMS-SLEAVISCDEERL----KLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~-~~~~~i~~~~~~~----~~~~~~ 146 (582)
+|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.+ ...|.+.+++... ......
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~ 82 (249)
T PRK14253 3 KFNIENLDLFYGENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLR 82 (249)
T ss_pred eEEEeccEEEECCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHH
Confidence 68999999999988999999999999999999999999999999999998775310 0112222222111 011111
Q ss_pred HHhcc--ccCC--CcchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHHHHHhc
Q 007982 147 EILGA--QEDG--GGEQLERVYERLE--AL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALARALFI 216 (582)
Q Consensus 147 ~~~~~--~~~~--~~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LAraL~~ 216 (582)
..+++ +... .....+++..... .. .....++++.++++.+++.. ...++++.+|||||+|||+|||||+.
T Consensus 83 ~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~ 162 (249)
T PRK14253 83 IKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIARTIAM 162 (249)
T ss_pred hheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhhcCcccCCHHHHHHHHHHHHHHc
Confidence 22222 2211 1122333321111 11 12234456778888888742 24577899999999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 217 NPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 217 ~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
+|+||||||||++||+.++.++.++|+++ +.|||+|||+++++..+||++++|++|+++. .|+.+++
T Consensus 163 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~ 231 (249)
T PRK14253 163 EPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVE-HDDTQVI 231 (249)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEE-eCCHHHH
Confidence 99999999999999999999999999876 4799999999999999999999999999974 4665544
No 446
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.7e-37 Score=298.71 Aligned_cols=185 Identities=26% Similarity=0.399 Sum_probs=150.2
Q ss_pred EEEEEEEEEecCC----ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhh
Q 007982 367 LQFVEVTFGYTPD----NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEK 442 (582)
Q Consensus 367 l~~~~l~~~y~~~----~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~ 442 (582)
|+++||+++|++. +++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|...+ .++|++|.+.
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g--~i~~~~q~~~-- 76 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG--SIAYVSQEPW-- 76 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC--EEEEEecCch--
Confidence 4789999999753 3699999999999999999999999999999999999999999999877 6899999864
Q ss_pred cCCcccHHHHHHhcCCCChHHHHHHHHHhcCC-----------CCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 007982 443 LDMDMSALQYMIKEYPGNEEEKMRAAIGRFGL-----------TGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDE 511 (582)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDE 511 (582)
+ +..|+.+++..... ...+...++++.+++ .... ..++.+||+||||||+|||+|+.+|++|||||
T Consensus 77 l-~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~lS~G~~qrv~laral~~~p~llllDE 153 (204)
T cd03250 77 I-QNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEI-GEKGINLSGGQKQRISLARAVYSDADIYLLDD 153 (204)
T ss_pred h-ccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCccccee-cCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 2 24578887754211 112233344444433 2222 23467999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHH-HHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCe
Q 007982 512 PTNHLDIETIDSLAE-ALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQA 559 (582)
Q Consensus 512 Pt~~LD~~~~~~l~~-~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~ 559 (582)
||++||+.+.+.+.+ ++..+ +.|||++||+++++.. ||++++|++|+
T Consensus 154 P~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~-~d~i~~l~~G~ 204 (204)
T cd03250 154 PLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPH-ADQIVVLDNGR 204 (204)
T ss_pred ccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhh-CCEEEEEeCCC
Confidence 999999999998887 45533 4799999999999987 99999999884
No 447
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-37 Score=301.50 Aligned_cols=192 Identities=27% Similarity=0.385 Sum_probs=147.6
Q ss_pred eeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-------HHHHHHHHh
Q 007982 77 SLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-------KLEKEAEIL 149 (582)
Q Consensus 77 nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~ 149 (582)
||+|+|+++.+ |+||+|++ ++++|+||||||||||+++|+|+.+|+.|.+. +++... ........+
T Consensus 5 ~l~~~~~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~----~~g~~~~~~~~~~~~~~~~~~i 77 (214)
T cd03297 5 DIEKRLPDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIV----LNGTVLFDSRKKINLPPQQRKI 77 (214)
T ss_pred eeeEecCCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEE----ECCEecccccchhhhhhHhhcE
Confidence 89999999876 99999999 99999999999999999999999888766432 111110 011111223
Q ss_pred cc--ccCC---CcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeec
Q 007982 150 GA--QEDG---GGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLD 224 (582)
Q Consensus 150 ~~--~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLD 224 (582)
++ +... .....+++............+.++.++++.+|+.. ..++++.+||||||||++|||||+.+|++||||
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~la~al~~~p~llllD 156 (214)
T cd03297 78 GLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDH-LLNRYPAQLSGGEKQRVALARALAAQPELLLLD 156 (214)
T ss_pred EEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHh-HhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 22 2111 11223333221111122334567889999999974 568899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEE
Q 007982 225 EPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKF 276 (582)
Q Consensus 225 EPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 276 (582)
|||++||+.++..+.++|+++ +.|||++|||++++..+||++++|++|+++.
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 212 (214)
T cd03297 157 EPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQY 212 (214)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEe
Confidence 999999999999999998764 6799999999999999999999999999863
No 448
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-37 Score=303.23 Aligned_cols=186 Identities=21% Similarity=0.307 Sum_probs=159.2
Q ss_pred CCeEEEEEEEEEecCC--------ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEe
Q 007982 364 PPVLQFVEVTFGYTPD--------NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQF 435 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~--------~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~ 435 (582)
.++++++|+++.|+-. ..+++||||+|.+||+++|||.||||||||-|+|.|+++|++|+|.+.+..- .
T Consensus 2 ~~ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i-~-- 78 (268)
T COG4608 2 EPLLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDI-T-- 78 (268)
T ss_pred CceEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcch-h--
Confidence 3689999999999632 2689999999999999999999999999999999999999999999877520 0
Q ss_pred chhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCC
Q 007982 436 HQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNH 515 (582)
Q Consensus 436 ~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~ 515 (582)
.+. .....+++.++|+.+|+......+.+++|||||+|||+|||||+.+|+++++||||++
T Consensus 79 --------~~~-----------~~~~~~~v~elL~~Vgl~~~~~~ryPhelSGGQrQRi~IARALal~P~liV~DEpvSa 139 (268)
T COG4608 79 --------KLS-----------KEERRERVLELLEKVGLPEEFLYRYPHELSGGQRQRIGIARALALNPKLIVADEPVSA 139 (268)
T ss_pred --------hcc-----------hhHHHHHHHHHHHHhCCCHHHhhcCCcccCchhhhhHHHHHHHhhCCcEEEecCchhh
Confidence 000 1123467899999999987554455689999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 516 LDIETIDSLAEALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 516 LD~~~~~~l~~~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||...+..+..++.++ +.+.++||||+..+..+||||.||..|+|++ .|+.+++..
T Consensus 140 LDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE-~g~~~~~~~ 199 (268)
T COG4608 140 LDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVE-IGPTEEVFS 199 (268)
T ss_pred cchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeE-ecCHHHHhh
Confidence 9999888888887654 6799999999999999999999999999987 677777654
No 449
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-37 Score=339.54 Aligned_cols=197 Identities=23% Similarity=0.276 Sum_probs=166.0
Q ss_pred EEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------eeEEEec
Q 007982 369 FVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------LRIAQFH 436 (582)
Q Consensus 369 ~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~~~~~~~ 436 (582)
++|++++|++ +++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..++|++
T Consensus 1 ~~nl~~~~~~-~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~ 79 (491)
T PRK10982 1 MSNISKSFPG-VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMVH 79 (491)
T ss_pred CCceEEEeCC-EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEe
Confidence 4689999964 67999999999999999999999999999999999999999999987652 2488999
Q ss_pred hhhhhhcCCcccHHHHHHhcC---CC---C---hHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 007982 437 QHLAEKLDMDMSALQYMIKEY---PG---N---EEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHML 507 (582)
Q Consensus 437 q~~~~~~~~~~~~~~~~~~~~---~~---~---~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lL 507 (582)
|... +....++.+++.... .. . ..+++.++++.+|+.... ++++.+|||||||||+|||||+.+|++|
T Consensus 80 q~~~--~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~LSgGq~qrv~lA~al~~~p~ll 156 (491)
T PRK10982 80 QELN--LVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDP-RAKVATLSVSQMQMIEIAKAFSYNAKIV 156 (491)
T ss_pred cccc--cccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCc-cCchhhCCHHHHHHHHHHHHHHhCCCEE
Confidence 8753 344567777764221 01 1 134578899999997654 4567899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHH
Q 007982 508 LLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDF 570 (582)
Q Consensus 508 lLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 570 (582)
||||||+|||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++|+++ ..|+.+++
T Consensus 157 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~ 221 (491)
T PRK10982 157 IMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWI-ATQPLAGL 221 (491)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEE-eecChhhC
Confidence 999999999999999999988765 579999999999999999999999999997 46776654
No 450
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.2e-36 Score=297.19 Aligned_cols=188 Identities=23% Similarity=0.320 Sum_probs=155.4
Q ss_pred CeEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeE
Q 007982 365 PVLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~ 432 (582)
..|+++|++++|+.. .++|+++||+|.+|++++|+||||||||||+++|+|+++|++|+|.+.+. ..+
T Consensus 5 ~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 84 (207)
T cd03369 5 GEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSSL 84 (207)
T ss_pred CeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 468999999999742 47999999999999999999999999999999999999999999987652 248
Q ss_pred EEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCC
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEP 512 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 512 (582)
+|++|.+. +. ..++.+++... .....+.+.++++ + ..++.+|||||+|||+|||+++.+|++||||||
T Consensus 85 ~~v~q~~~--~~-~~tv~~~l~~~-~~~~~~~~~~~l~---~-----~~~~~~LS~G~~qrv~laral~~~p~llllDEP 152 (207)
T cd03369 85 TIIPQDPT--LF-SGTIRSNLDPF-DEYSDEEIYGALR---V-----SEGGLNLSQGQRQLLCLARALLKRPRVLVLDEA 152 (207)
T ss_pred EEEecCCc--cc-CccHHHHhccc-CCCCHHHHHHHhh---c-----cCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCC
Confidence 89988753 22 34777776422 1122333444444 2 234689999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCC
Q 007982 513 TNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGD 566 (582)
Q Consensus 513 t~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~ 566 (582)
|++||+.++..+.+.|+++ +.|+|++|||++++.. ||++++|++|++.. .|+
T Consensus 153 ~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~-~d~v~~l~~g~i~~-~g~ 206 (207)
T cd03369 153 TASIDYATDALIQKTIREEFTNSTILTIAHRLRTIID-YDKILVMDAGEVKE-YDH 206 (207)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhh-CCEEEEEECCEEEe-cCC
Confidence 9999999999999999876 5699999999999976 99999999999864 443
No 451
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-38 Score=289.87 Aligned_cols=204 Identities=23% Similarity=0.339 Sum_probs=170.8
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhh-----
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLA----- 440 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~----- 440 (582)
|++++||+++|+ ++.+++++|++|++|.+++|+|||||||||||.+++.++++++|+|...+..-..+-.+.++
T Consensus 1 MI~i~nv~K~y~-~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~LAk~lSI 79 (252)
T COG4604 1 MITIENVSKSYG-TKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKELAKKLSI 79 (252)
T ss_pred CeeehhhhHhhC-CEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHHHHHHHHH
Confidence 578999999996 47899999999999999999999999999999999999999999999876532222222222
Q ss_pred ----hhcCCcccHHHHHHhc-CC-------CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 007982 441 ----EKLDMDMSALQYMIKE-YP-------GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLL 508 (582)
Q Consensus 441 ----~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLl 508 (582)
..+....|+.+.+..+ || ..++..+.++++.++|++.. ++...+||||||||.-+|..++++.+.++
T Consensus 80 LkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~-dryLd~LSGGQrQRAfIAMVlaQdTdyvl 158 (252)
T COG4604 80 LKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLS-DRYLDELSGGQRQRAFIAMVLAQDTDYVL 158 (252)
T ss_pred HHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccchH-HHhHHhcccchhhhhhhheeeeccCcEEE
Confidence 1234566777776532 32 12456689999999998755 45678999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHh----cCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 509 LDEPTNHLDIETIDSLAEALNE----WDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 509 LDEPt~~LD~~~~~~l~~~l~~----~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
||||.|+||+.....+++.+++ +++|||+|-||.+|+..++|.|+.|++|+++ ..|++++...
T Consensus 159 LDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv-~~G~~~eii~ 225 (252)
T COG4604 159 LDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVV-KQGSPDEIIQ 225 (252)
T ss_pred ecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEE-ecCCHHHhcC
Confidence 9999999999988888777764 5899999999999999999999999999997 5999998754
No 452
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.1e-37 Score=324.37 Aligned_cols=201 Identities=24% Similarity=0.360 Sum_probs=157.5
Q ss_pred EEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH------HHHHH-HHHhc--
Q 007982 80 VTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL------KLEKE-AEILG-- 150 (582)
Q Consensus 80 ~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~------~~~~~-~~~~~-- 150 (582)
|.|+++.+|+|+||+|++||+++|+||||||||||+++|+|+.+|+.|.+ .+++..+ .+... ...++
T Consensus 1 ~~~~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I----~i~G~~i~~~~~~~~~~~rr~~i~~v 76 (363)
T TIGR01186 1 KKTGGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQI----FIDGENIMKQSPVELREVRRKKIGMV 76 (363)
T ss_pred CccCCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEE----EECCEECCcCCHHHHHHHHhCcEEEE
Confidence 46888899999999999999999999999999999999999999886643 2222111 11110 11222
Q ss_pred cccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecC
Q 007982 151 AQEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDE 225 (582)
Q Consensus 151 ~~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDE 225 (582)
+|... ..+..+++.... ...+.....+++.++++.+||.. ..++++.+|||||||||+|||||+.+|+||||||
T Consensus 77 ~Q~~~l~~~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~-~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 77 FQQFALFPHMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEE-YEHRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred ECCCcCCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCch-hhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 22211 123444443322 23345556778999999999974 6789999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 226 PTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 226 Pt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
||++||+.++.++.+.|.++ ++|||+||||++++..+||+|++|++|+++. .|+++++..
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~-~g~~~ei~~ 219 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQ-VGTPDEILR 219 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEe-eCCHHHHHh
Confidence 99999999999999988654 6799999999999999999999999999974 577776653
No 453
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-37 Score=305.70 Aligned_cols=207 Identities=23% Similarity=0.346 Sum_probs=156.5
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhc
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILG 150 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 150 (582)
+|+++||+++|++.. .++||+|.+|++++|+||||||||||+++|+|+.+++.|.+ .+++.... .......++
T Consensus 1 ~l~~~~l~~~~~~~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i----~~~g~~~~~~~~~~~~i~ 74 (232)
T PRK10771 1 MLKLTDITWLYHHLP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSL----TLNGQDHTTTPPSRRPVS 74 (232)
T ss_pred CeEEEEEEEEECCcc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceE----EECCeecCcCChhhccEE
Confidence 478999999998654 39999999999999999999999999999999998876643 22221110 000011222
Q ss_pred c--ccCC---CcchHHHHHHHHH-cCC-hhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceee
Q 007982 151 A--QEDG---GGEQLERVYERLE-ALD-ASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLL 223 (582)
Q Consensus 151 ~--~~~~---~~~~~~~~~~~l~-~~~-~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlL 223 (582)
+ +... .....+++..... ... ....+.++.++++.+|+.. ..++++.+|||||||||+|||||+.+|++|||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~laral~~~p~lllL 153 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIED-LLARLPGQLSGGQRQRVALARCLVREQPILLL 153 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHH-HHhCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 2 1111 1122233211111 111 1233567899999999964 67899999999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 224 DEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 224 DEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
||||++||+.++..+.++|.++ +.|+|++|||++++..+||++++|++|++. +.|+++++..
T Consensus 154 DEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~-~~g~~~~~~~ 219 (232)
T PRK10771 154 DEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIA-WDGPTDELLS 219 (232)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEE-EeCCHHHHHh
Confidence 9999999999999999988754 579999999999999999999999999997 5677776653
No 454
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-37 Score=307.50 Aligned_cols=208 Identities=22% Similarity=0.319 Sum_probs=157.0
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS-----DMSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~-----~~~~~~~~i~~~~~~~-----~ 141 (582)
+|+++|+++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+.++ +.|. +.+++... .
T Consensus 3 ~l~~~~l~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~----i~i~g~~~~~~~~~ 78 (250)
T PRK14262 3 IIEIENFSAYYGEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGK----IYFKGQDIYDPQLD 78 (250)
T ss_pred eEEEEeeEEEeCCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceE----EEECCEEcccchhh
Confidence 68999999999988999999999999999999999999999999999998763 3332 32222111 0
Q ss_pred HHHHHHHhcc--ccCC--CcchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDG--GGEQLERVYERLE--AL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~--~~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LA 211 (582)
.......+++ +... .....+++..... .. .....+..+.++++.+|+.. ...++++.+|||||+||++||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qr~~la 158 (250)
T PRK14262 79 VTEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELNKPGTRLSGGQQQRLCIA 158 (250)
T ss_pred HHHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHhCChhhcCHHHHHHHHHH
Confidence 1111122322 2211 1222333321111 11 12234556788899998853 236789999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||+.+|++|||||||++||+.++.++.++|.++ +.|+|+||||++++..+||++++|++|+++. .|+.+++
T Consensus 159 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~ 232 (250)
T PRK14262 159 RALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIE-YGPTREI 232 (250)
T ss_pred HHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEE-ecCHHHH
Confidence 9999999999999999999999999999999876 4799999999999999999999999999974 4665554
No 455
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=4.3e-37 Score=351.62 Aligned_cols=206 Identities=29% Similarity=0.414 Sum_probs=176.5
Q ss_pred CeEEEEEEEEEecC-CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeE
Q 007982 365 PVLQFVEVTFGYTP-DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~-~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~ 432 (582)
.-|+++||+|+|++ .+++|+|+||+|++|+.+||+|+||||||||+++|+|+++|++|+|..++. ..+
T Consensus 462 ~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i 541 (694)
T TIGR03375 462 GEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNI 541 (694)
T ss_pred ceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhcc
Confidence 35899999999974 357999999999999999999999999999999999999999999998762 358
Q ss_pred EEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHcc
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~ 502 (582)
+|++|+.. .+..|+.+++....+..+.+++.++++.+|+.+.....| ...||||||||++||||+++
T Consensus 542 ~~v~Q~~~---lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~ 618 (694)
T TIGR03375 542 GYVPQDPR---LFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLR 618 (694)
T ss_pred EEECCChh---hhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhc
Confidence 99999864 345688998875544456677888888887754433222 35799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLHLK 575 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~~~ 575 (582)
+|++|||||||++||+++...+.+.|.+. +.|+|+|||+++.+ +.||+|++|++|++++ .|+.+++.+..+
T Consensus 619 ~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~-~~~D~iivl~~G~i~e-~G~~~eLl~~~~ 691 (694)
T TIGR03375 619 DPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLL-DLVDRIIVMDNGRIVA-DGPKDQVLEALR 691 (694)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHH-HhCCEEEEEeCCEEEe-eCCHHHHHHHhh
Confidence 99999999999999999999999999886 57999999999988 5799999999999985 899998876654
No 456
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=7.1e-37 Score=310.37 Aligned_cols=207 Identities=27% Similarity=0.405 Sum_probs=158.1
Q ss_pred ceEEeeeEEEEC---------CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH--
Q 007982 72 DIRIESLSVTFH---------GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-- 140 (582)
Q Consensus 72 ~i~v~nls~~y~---------~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-- 140 (582)
+|+++||++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++...
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~----~~g~~~~~ 78 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVS----WRGEPLAK 78 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEE----ECCEeccc
Confidence 689999999997 47899999999999999999999999999999999999888765432 221111
Q ss_pred ----HHHHHHHHhcc--ccC-----CCcchHHHHHHHHH---cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHH
Q 007982 141 ----KLEKEAEILGA--QED-----GGGEQLERVYERLE---ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRM 206 (582)
Q Consensus 141 ----~~~~~~~~~~~--~~~-----~~~~~~~~~~~~l~---~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrq 206 (582)
........+++ +.. ......+.+...+. .........++.++++.+|+.....++++.+|||||||
T Consensus 79 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~q 158 (268)
T PRK10419 79 LNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQ 158 (268)
T ss_pred cChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHH
Confidence 00111122222 111 11122222221111 22333445678999999999644568899999999999
Q ss_pred HHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChh
Q 007982 207 RIALARALFINPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFD 282 (582)
Q Consensus 207 Rv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~ 282 (582)
|++|||||+.+|++|||||||++||+.++..+.+.|+++ +.|+|++||+++++..+||++++|++|+++. .|+.+
T Consensus 159 rl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~-~g~~~ 237 (268)
T PRK10419 159 RVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVE-TQPVG 237 (268)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEee-eCChh
Confidence 999999999999999999999999999999999888654 6799999999999999999999999999964 45554
Q ss_pred H
Q 007982 283 Q 283 (582)
Q Consensus 283 ~ 283 (582)
+
T Consensus 238 ~ 238 (268)
T PRK10419 238 D 238 (268)
T ss_pred h
Confidence 4
No 457
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI's are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLI's have an N-terminal Fe-S domain and two nucleotide-binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity of more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.
Probab=100.00 E-value=4.3e-37 Score=307.51 Aligned_cols=195 Identities=19% Similarity=0.275 Sum_probs=156.0
Q ss_pred EEecCCceeeEeeeEEEe-----cCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCceeEEEechhhhhhcCCccc
Q 007982 374 FGYTPDNLIYKNLDFGVD-----LDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDMDMS 448 (582)
Q Consensus 374 ~~y~~~~~~l~~vsl~i~-----~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~~~~~~~~q~~~~~~~~~~~ 448 (582)
|+|++....+.+++|++. +|++++|+||||||||||+++|+|+++|++|+|.+.+. .++|++|.+. ..+..+
T Consensus 1 ~~y~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~NGsGKSTLlk~L~G~~~p~~G~i~~~g~-~i~~~~q~~~--~~~~~t 77 (246)
T cd03237 1 YTYPTMKKTLGEFTLEVEGGSISESEVIGILGPNGIGKTTFIKMLAGVLKPDEGDIEIELD-TVSYKPQYIK--ADYEGT 77 (246)
T ss_pred CCCcccccccCcEEEEEecCCcCCCCEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCc-eEEEeccccc--CCCCCC
Confidence 356544456777887776 68999999999999999999999999999999998765 6899998754 234567
Q ss_pred HHHHHHhcCC--CChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHHHHHHHH
Q 007982 449 ALQYMIKEYP--GNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEPTNHLDIETIDSLAE 526 (582)
Q Consensus 449 ~~~~~~~~~~--~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~ 526 (582)
+.+++..... ........++++.+|+.... ++++.+|||||+|||+|||||+.+|++|||||||++||+.++..+.+
T Consensus 78 v~e~l~~~~~~~~~~~~~~~~~l~~l~l~~~~-~~~~~~LSgGe~qrv~iaraL~~~p~llllDEPt~~LD~~~~~~l~~ 156 (246)
T cd03237 78 VRDLLSSITKDFYTHPYFKTEIAKPLQIEQIL-DREVPELSGGELQRVAIAACLSKDADIYLLDEPSAYLDVEQRLMASK 156 (246)
T ss_pred HHHHHHHHhhhccccHHHHHHHHHHcCCHHHh-hCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH
Confidence 7776643211 11123467789999997654 45678999999999999999999999999999999999999999999
Q ss_pred HHHhc----CceEEEEecCHHHHHhhcCEEEEEeCCeEE-EEcCCHHHHHH
Q 007982 527 ALNEW----DGGLVLVSHDFRLINQVAHEIWVCENQAVT-RWEGDIMDFKL 572 (582)
Q Consensus 527 ~l~~~----~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~-~~~g~~~~~~~ 572 (582)
.|+++ +.|||+||||++++..+||+|++|+++... ...+++.+..+
T Consensus 157 ~l~~~~~~~~~tiiivsHd~~~~~~~~d~i~~l~~~~~~~~~~~~~~~~~~ 207 (246)
T cd03237 157 VIRRFAENNEKTAFVVEHDIIMIDYLADRLIVFEGEPSVNGVANPPQSLRS 207 (246)
T ss_pred HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEcCCCeeEEEeCCchHHHH
Confidence 88875 579999999999999999999999765432 23455555443
No 458
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-37 Score=312.50 Aligned_cols=211 Identities=20% Similarity=0.307 Sum_probs=157.8
Q ss_pred ccceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCCceeeeeechHHHHH---
Q 007982 70 SRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA-----SDMSSLEAVISCDEERLK--- 141 (582)
Q Consensus 70 ~~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~-----~~~~~~~~~i~~~~~~~~--- 141 (582)
..+|+++|++++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.. ++.|. +.+++....
T Consensus 37 ~~~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~----I~~~g~~i~~~~ 112 (286)
T PRK14275 37 KPHVVAKNFSIYYGEFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGA----LMFDGEDIYGKF 112 (286)
T ss_pred ceEEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceE----EEECCEEhhhcc
Confidence 347999999999998889999999999999999999999999999999999753 24443 222221110
Q ss_pred --HHHHHHHhcc--ccCCC--cchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCC---hhhhhccCCCCChhHHHHHH
Q 007982 142 --LEKEAEILGA--QEDGG--GEQLERVYERLE--AL-DASTAEKRAAEILYGLGFN---KTMQAKKTRDFSGGWRMRIA 209 (582)
Q Consensus 142 --~~~~~~~~~~--~~~~~--~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~---~~~~~~~~~~LSGGqrqRv~ 209 (582)
.......+++ +.... ....+++..... .. +....+.++.++++.+|+. ....++++.+|||||||||+
T Consensus 113 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~ 192 (286)
T PRK14275 113 TDEVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRLC 192 (286)
T ss_pred cchHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhhCChhhCCHHHHHHHH
Confidence 0011122322 22111 123333322111 11 1223456677888888873 23457889999999999999
Q ss_pred HHHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 210 LARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 210 LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||||+.+|++|||||||++||+.++..+.+.|+++ +.|||++|||++++..+||++++|++|+++. .|..+++.
T Consensus 193 LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~-~g~~~~~~ 269 (286)
T PRK14275 193 VARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVE-HAPTAQLF 269 (286)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 999999999999999999999999999999999876 4699999999999999999999999999974 56665543
No 459
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-37 Score=324.63 Aligned_cols=201 Identities=21% Similarity=0.310 Sum_probs=153.9
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH-------HHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL-------KLEK 144 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~-------~~~~ 144 (582)
||++ ||+++|+++.+ |+||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ....
T Consensus 1 ~l~~-~l~k~~~~~~~--~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~----~~g~~~~~~~~~~~~~~ 73 (352)
T PRK11144 1 MLEL-NFKQQLGDLCL--TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIV----LNGRVLFDAEKGICLPP 73 (352)
T ss_pred CeEE-EEEEEeCCEEE--EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEEccccccccccch
Confidence 4778 99999988653 89999999999999999999999999999999988765432 211110 0111
Q ss_pred HHHHhcc--ccCC---CcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCC
Q 007982 145 EAEILGA--QEDG---GGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPT 219 (582)
Q Consensus 145 ~~~~~~~--~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~ 219 (582)
....+++ +... .....+++...+. .....++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|+
T Consensus 74 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~----~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgGq~qRvalaraL~~~p~ 148 (352)
T PRK11144 74 EKRRIGYVFQDARLFPHYKVRGNLRYGMA----KSMVAQFDKIVALLGIEP-LLDRYPGSLSGGEKQRVAIGRALLTAPE 148 (352)
T ss_pred hhCCEEEEcCCcccCCCCcHHHHHHhhhh----hhhHHHHHHHHHHcCCch-hhhCCcccCCHHHHHHHHHHHHHHcCCC
Confidence 1112222 2211 1122333322111 123457889999999974 5689999999999999999999999999
Q ss_pred ceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 220 ILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 220 lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+|||||||++||+.++..+.+.|+++ +.|+|+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 149 llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~-~g~~~~i~ 217 (352)
T PRK11144 149 LLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKA-FGPLEEVW 217 (352)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEE-ecCHHHHH
Confidence 99999999999999999999988754 6799999999999999999999999999974 46665543
No 460
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-37 Score=307.26 Aligned_cols=209 Identities=23% Similarity=0.302 Sum_probs=156.4
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CCCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA--S---DMSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~--~---~~~~~~~~i~~~~~~~-----~ 141 (582)
+|+++|++++|+++.+|+++||+|++||+++|+||||||||||+++|+|+.. | +.|. +.+++... .
T Consensus 5 ~l~~~~l~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~----i~~~g~~~~~~~~~ 80 (252)
T PRK14239 5 ILQVSDLSVYYNKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGS----IVYNGHNIYSPRTD 80 (252)
T ss_pred eEEEEeeEEEECCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccce----EEECCEECcCcccc
Confidence 6999999999998899999999999999999999999999999999999842 4 2333 22222111 0
Q ss_pred HHHHHHHhcc--ccCC--CcchHHHHHHHHH--cCC-hhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDG--GGEQLERVYERLE--ALD-ASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~--~~~~~~~~~~~l~--~~~-~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LA 211 (582)
.......+++ +... .....+++..... ... ......++.++++.+++.. ...++++.+|||||||||+||
T Consensus 81 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 160 (252)
T PRK14239 81 TVDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIA 160 (252)
T ss_pred hHhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHHH
Confidence 0111112222 2111 1223333322111 111 2234566788899998742 245788999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||+.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 161 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~~ 235 (252)
T PRK14239 161 RVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIE-YNDTKQMF 235 (252)
T ss_pred HHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEE-eCCHHHHH
Confidence 9999999999999999999999999999999876 4799999999999999999999999999974 46665543
No 461
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-37 Score=313.12 Aligned_cols=209 Identities=21% Similarity=0.331 Sum_probs=156.9
Q ss_pred ccceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC-----CCCCceeeeeechHHHH----
Q 007982 70 SRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA-----SDMSSLEAVISCDEERL---- 140 (582)
Q Consensus 70 ~~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~-----~~~~~~~~~i~~~~~~~---- 140 (582)
..+|+++||+++|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+ ++.|.+ .+++...
T Consensus 37 ~~~l~i~~l~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I----~i~G~~i~~~~ 112 (285)
T PRK14254 37 ETVIEARDLNVFYGDEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGEL----TFRGKNVYDAD 112 (285)
T ss_pred CceEEEEEEEEEECCEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEE----EECCEEccccc
Confidence 347999999999998899999999999999999999999999999999999975 344432 2222111
Q ss_pred -HHHHHHHHhc--cccCCC--cchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHH
Q 007982 141 -KLEKEAEILG--AQEDGG--GEQLERVYERLE--ALDASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 141 -~~~~~~~~~~--~~~~~~--~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~L 210 (582)
........++ ++.... ....+++..... ... .....++.++++.+|+.. ...++++.+|||||||||+|
T Consensus 113 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LSgGe~qrv~L 191 (285)
T PRK14254 113 VDPVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYD-GDIDERVEESLRRAALWDEVKDQLDSSGLDLSGGQQQRLCI 191 (285)
T ss_pred cchHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCc-HHHHHHHHHHHHHcCCCchhHHHHhCCcccCCHHHHHHHHH
Confidence 0011112222 222111 122333322111 122 234567889999999842 24578899999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEE-EEeCCeEEEEcCChhHH
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNII-HMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~-~l~~G~i~~~~g~~~~~ 284 (582)
||||+.+|+||||||||++||+.++..+.++|+++ +.|||++|||++++..+|||++ +|++|+++. .|+.+++
T Consensus 192 AraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~-~g~~~~~ 267 (285)
T PRK14254 192 ARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVE-FDDTDKI 267 (285)
T ss_pred HHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEE-eCCHHHH
Confidence 99999999999999999999999999999999887 4699999999999999999975 579999975 4665544
No 462
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=3.4e-37 Score=309.41 Aligned_cols=197 Identities=26% Similarity=0.379 Sum_probs=152.7
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhc-
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILG- 150 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~- 150 (582)
+|+++||++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+ .++.. ..++
T Consensus 4 ~l~~~~l~~~~~~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i----~~~~~--------~~i~~ 71 (251)
T PRK09544 4 LVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVI----KRNGK--------LRIGY 71 (251)
T ss_pred EEEEeceEEEECCceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEE----EECCc--------cCEEE
Confidence 7999999999998899999999999999999999999999999999999988876543 22210 0111
Q ss_pred -cccCCCcchH-HHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecCCCC
Q 007982 151 -AQEDGGGEQL-ERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTN 228 (582)
Q Consensus 151 -~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~ 228 (582)
++.......+ ..+.+.+. +.......++.++++.+|+.+ ..++++.+|||||||||+|||||+.+|++|||||||+
T Consensus 72 v~q~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~ 149 (251)
T PRK09544 72 VPQKLYLDTTLPLTVNRFLR-LRPGTKKEDILPALKRVQAGH-LIDAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQ 149 (251)
T ss_pred eccccccccccChhHHHHHh-ccccccHHHHHHHHHHcCChH-HHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 1111000000 12222221 111112345788999999974 5678999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 229 HLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 229 ~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
+||+.++.++.+.|+++ +.|||+||||++++..+||+|++|++ +++ ..|+++++
T Consensus 150 ~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~-~~g~~~~~ 207 (251)
T PRK09544 150 GVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HIC-CSGTPEVV 207 (251)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceE-eeCCHHHH
Confidence 99999999999988654 67999999999999999999999975 665 45666654
No 463
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-37 Score=303.14 Aligned_cols=213 Identities=25% Similarity=0.340 Sum_probs=165.9
Q ss_pred ceEEeeeEEEECCe------------------------eeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCC
Q 007982 72 DIRIESLSVTFHGH------------------------DLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMS 127 (582)
Q Consensus 72 ~i~v~nls~~y~~~------------------------~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~ 127 (582)
.|+++|++|-||.+ .-++|+||+|+.||++.|+|-||||||||+++|+++..|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 58899999999642 247899999999999999999999999999999999998866
Q ss_pred ceeee----eechHHHH-HHHHH-HHHhcccc--CCCcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccC
Q 007982 128 SLEAV----ISCDEERL-KLEKE-AEILGAQE--DGGGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKT 197 (582)
Q Consensus 128 ~~~~~----i~~~~~~~-~~~~~-~~~~~~~~--~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~ 197 (582)
.+... ...+.... .++.. ...+++++ .+..++++++...+ .+.+..+.++++.++|+.+||.. +.+++|
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~-~~~~yp 162 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEG-YADKYP 162 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchh-hhhcCc
Confidence 53210 01111111 11111 11222111 12234445554433 46788888999999999999975 678999
Q ss_pred CCCChhHHHHHHHHHHHhcCCCceeecCCCCCCCHHHHHHHHHHH----hhcCcEEEEEecCHHHHHhhcCeEEEEeCCe
Q 007982 198 RDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEETL----KKFDRILVVISHSQDFLNGVCTNIIHMQNKQ 273 (582)
Q Consensus 198 ~~LSGGqrqRv~LAraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l----~~~~~tviivsHd~~~~~~~~d~i~~l~~G~ 273 (582)
++|||||||||.|||||+.+|+|||+|||+|+|||--+..+.+.| +++++||||||||++++.++.|||.+|++|+
T Consensus 163 ~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~ 242 (386)
T COG4175 163 NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGE 242 (386)
T ss_pred ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCe
Confidence 999999999999999999999999999999999998777666655 4568999999999999999999999999999
Q ss_pred EEEEcCChhHHHH
Q 007982 274 LKFYTGNFDQYVQ 286 (582)
Q Consensus 274 i~~~~g~~~~~~~ 286 (582)
|+ ..|++++++.
T Consensus 243 iv-Q~Gtp~eIl~ 254 (386)
T COG4175 243 IV-QVGTPEEILL 254 (386)
T ss_pred EE-EeCCHHHHHc
Confidence 97 4688887764
No 464
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-37 Score=302.73 Aligned_cols=182 Identities=25% Similarity=0.389 Sum_probs=156.3
Q ss_pred ceEEeeeEEEECC---------eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHH
Q 007982 72 DIRIESLSVTFHG---------HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKL 142 (582)
Q Consensus 72 ~i~v~nls~~y~~---------~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~ 142 (582)
.++++||++.|.- ..+++||||+|++||++||||+||||||||.|+|.++..|+.|. +.+.+..+.
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~----i~f~g~~i~- 78 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGE----ILFEGKDIT- 78 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCce----EEEcCcchh-
Confidence 6899999999952 37999999999999999999999999999999999999988654 333332210
Q ss_pred HHHHHHhccccCCCcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCcee
Q 007982 143 EKEAEILGAQEDGGGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILL 222 (582)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLl 222 (582)
.+......+++.++|+.+|+.....++++++|||||+|||+|||||+.+|++++
T Consensus 79 --------------------------~~~~~~~~~~v~elL~~Vgl~~~~~~ryPhelSGGQrQRi~IARALal~P~liV 132 (268)
T COG4608 79 --------------------------KLSKEERRERVLELLEKVGLPEEFLYRYPHELSGGQRQRIGIARALALNPKLIV 132 (268)
T ss_pred --------------------------hcchhHHHHHHHHHHHHhCCCHHHhhcCCcccCchhhhhHHHHHHHhhCCcEEE
Confidence 011334557799999999999888999999999999999999999999999999
Q ss_pred ecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 223 LDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 223 LDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+|||||+||...+.++.++|.++ +.|.++||||+..+..+||||++|..|+|+. .|+.++.+
T Consensus 133 ~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE-~g~~~~~~ 198 (268)
T COG4608 133 ADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVE-IGPTEEVF 198 (268)
T ss_pred ecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeE-ecCHHHHh
Confidence 99999999999999999888654 6799999999999999999999999999985 45555544
No 465
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-37 Score=303.64 Aligned_cols=207 Identities=20% Similarity=0.366 Sum_probs=148.7
Q ss_pred ceEEeeeEEEECC-eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHHH
Q 007982 72 DIRIESLSVTFHG-HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEAE 147 (582)
Q Consensus 72 ~i~v~nls~~y~~-~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~ 147 (582)
.|+++|++++|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++... .......
T Consensus 2 ~l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i----~~~g~~~~~~~~~~~~~ 77 (229)
T cd03254 2 EIEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQI----LIDGIDIRDISRKSLRS 77 (229)
T ss_pred eEEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEE----EECCEeHHHcCHHHHhh
Confidence 4889999999975 579999999999999999999999999999999999998876643 2222111 1111112
Q ss_pred HhccccCCCcchHHHHHHHHHcCChhHHHHHHHHHH---------HhC--CCChhhhhccCCCCChhHHHHHHHHHHHhc
Q 007982 148 ILGAQEDGGGEQLERVYERLEALDASTAEKRAAEIL---------YGL--GFNKTMQAKKTRDFSGGWRMRIALARALFI 216 (582)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l---------~~l--gl~~~~~~~~~~~LSGGqrqRv~LAraL~~ 216 (582)
.+++.+.........+.+.+...........+.+++ +.+ |+.. ..++++.+|||||||||+|||||+.
T Consensus 78 ~i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~LS~G~~~rv~la~al~~ 156 (229)
T cd03254 78 MIGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDT-VLGENGGNLSQGERQLLAIARAMLR 156 (229)
T ss_pred hEEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccC-HhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 233222211111123333332111101112233333 333 4432 3456789999999999999999999
Q ss_pred CCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 217 NPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 217 ~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+|++|||||||++||+.++.++.+.|.++ +.|||+|||+++++. .||++++|++|+++. .|+++++.
T Consensus 157 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~-~~d~i~~l~~g~~~~-~~~~~~~~ 225 (229)
T cd03254 157 DPKILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIK-NADKILVLDDGKIIE-EGTHDELL 225 (229)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHh-hCCEEEEEeCCeEEE-eCCHHHHH
Confidence 99999999999999999999999999876 479999999999996 599999999999974 56666553
No 466
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-37 Score=307.40 Aligned_cols=213 Identities=22% Similarity=0.351 Sum_probs=156.5
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCC-ceeeeeechHHHH-----HHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMS-SLEAVISCDEERL-----KLEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~-~~~~~i~~~~~~~-----~~~~~ 145 (582)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.. ...|.+.+++... .....
T Consensus 4 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (252)
T PRK14272 4 LLSAQDVNIYYGDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAM 83 (252)
T ss_pred EEEEeeeEEEECCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHh
Confidence 68999999999988999999999999999999999999999999999999765310 0012222222111 00111
Q ss_pred HHHhcc--ccCC---CcchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHHHHH
Q 007982 146 AEILGA--QEDG---GGEQLERVYERLE--AL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALARAL 214 (582)
Q Consensus 146 ~~~~~~--~~~~---~~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LAraL 214 (582)
...+++ +... .....+++..... .. ......+.+.++++.+++.. ...++++.+|||||||||+|||||
T Consensus 84 ~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral 163 (252)
T PRK14272 84 RRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRLKTPATGLSGGQQQRLCIARAL 163 (252)
T ss_pred hceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhhcCCcccCCHHHHHHHHHHHHH
Confidence 112221 2111 1223333322211 11 12234456777777776531 235788999999999999999999
Q ss_pred hcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 215 FINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 215 ~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
+.+|++|||||||++||+.++.++.++|+++ +.|+|++||+++++..+||++++|++|+++ +.|+.+++.
T Consensus 164 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~-~~~~~~~~~ 235 (252)
T PRK14272 164 AVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLV-EHGPTDQLF 235 (252)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE-EeCCHHHHH
Confidence 9999999999999999999999999999876 479999999999999999999999999997 456666554
No 467
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-37 Score=312.11 Aligned_cols=207 Identities=22% Similarity=0.372 Sum_probs=158.3
Q ss_pred ceEEeeeEEEEC--CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHH
Q 007982 72 DIRIESLSVTFH--GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~--~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~ 146 (582)
+|+++|+++.|+ ++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.|.+. +++... ......
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~----~~g~~i~~~~~~~~~ 82 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIK----IDGITISKENLKEIR 82 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE----ECCEecCcCCHHHHh
Confidence 799999999995 46899999999999999999999999999999999999988765432 221111 011111
Q ss_pred HHhcc--ccC----CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 147 EILGA--QED----GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 147 ~~~~~--~~~----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
..+++ +.. ......+++..... .+.......++.++++.+|+.+ ..++++.+||||||||++|||||+.+|
T Consensus 83 ~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrl~laral~~~p 161 (271)
T PRK13632 83 KKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMED-YLDKEPQNLSGGQKQRVAIASVLALNP 161 (271)
T ss_pred cceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHH-HhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 12222 211 11122333321111 1333445567889999999974 568899999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
++|||||||++||+.++..+.++|+++ +.|+|++||+++++. .||++++|++|++.. .|+.+++.
T Consensus 162 ~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~-~~d~v~~l~~G~i~~-~g~~~~~~ 230 (271)
T PRK13632 162 EIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAI-LADKVIVFSEGKLIA-QGKPKEIL 230 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHh-hCCEEEEEECCEEEE-ecCHHHHh
Confidence 999999999999999999999999765 379999999999986 799999999999964 46655543
No 468
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-37 Score=309.49 Aligned_cols=211 Identities=24% Similarity=0.265 Sum_probs=156.6
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCC----ceeeeeechHHHH---HHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMS----SLEAVISCDEERL---KLEK 144 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~----~~~~~i~~~~~~~---~~~~ 144 (582)
+|+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.+ ...|.+.+++... ....
T Consensus 1 ml~~~nl~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (272)
T PRK13547 1 MLTADHLHVARRHRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPR 80 (272)
T ss_pred CeEEEEEEEEECCEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHH
Confidence 48899999999999999999999999999999999999999999999999877510 0122233322111 0111
Q ss_pred HHHHhc--cccCC---CcchHHHHHHHHH-c-----CChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHH
Q 007982 145 EAEILG--AQEDG---GGEQLERVYERLE-A-----LDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARA 213 (582)
Q Consensus 145 ~~~~~~--~~~~~---~~~~~~~~~~~l~-~-----~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAra 213 (582)
....+. ++... .....+++..... . ........++.++++.+|+.. ..++++.+|||||||||+||||
T Consensus 81 ~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LSgG~~qrv~lara 159 (272)
T PRK13547 81 LARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATA-LVGRDVTTLSGGELARVQFARV 159 (272)
T ss_pred HHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHh-hhcCCcccCCHHHHHHHHHHHH
Confidence 111122 22211 1222333321110 0 011223456888999999974 5688999999999999999999
Q ss_pred Hh---------cCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCC
Q 007982 214 LF---------INPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGN 280 (582)
Q Consensus 214 L~---------~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~ 280 (582)
|+ .+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|+
T Consensus 160 l~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~-~g~ 238 (272)
T PRK13547 160 LAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVA-HGA 238 (272)
T ss_pred HhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEE-ecC
Confidence 99 599999999999999999999999998754 5799999999999999999999999999974 466
Q ss_pred hhHH
Q 007982 281 FDQY 284 (582)
Q Consensus 281 ~~~~ 284 (582)
.+++
T Consensus 239 ~~~~ 242 (272)
T PRK13547 239 PADV 242 (272)
T ss_pred HHHH
Confidence 5543
No 469
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=305.12 Aligned_cols=202 Identities=19% Similarity=0.259 Sum_probs=166.4
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCC-----CCCcEEEEcCc-----------
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLV-----PLDGMVRRHNH----------- 429 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~-----p~~G~i~~~~~----------- 429 (582)
+|+++||++.|++ +.+|+|+||+|.+|++++|+||||||||||+++|+|++. |++|+|...+.
T Consensus 3 ~l~~~~v~~~~~~-~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 81 (250)
T PRK14266 3 RIEVENLNTYFDD-AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVE 81 (250)
T ss_pred EEEEEeEEEEeCC-eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHH
Confidence 5889999999964 679999999999999999999999999999999999864 48999976542
Q ss_pred --eeEEEechhhhhhcCCcccHHHHHHhcC--C---CC--hHHHHHHHHHhcCCCCc---cccCCCCCCChhHHHHHHHH
Q 007982 430 --LRIAQFHQHLAEKLDMDMSALQYMIKEY--P---GN--EEEKMRAAIGRFGLTGK---AQVMPMKNLSDGQRSRVVFA 497 (582)
Q Consensus 430 --~~~~~~~q~~~~~~~~~~~~~~~~~~~~--~---~~--~~~~~~~~l~~~gl~~~---~~~~~~~~LSgGqkqrv~lA 497 (582)
..++|++|... +. ..++.+++.... . .. ..+++.++++.+|+... ..+.++.+|||||+|||+||
T Consensus 82 ~~~~i~~~~q~~~--~~-~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~la 158 (250)
T PRK14266 82 LRKKVGMVFQKPN--PF-PKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLDKSALGLSGGQQQRLCIA 158 (250)
T ss_pred HhhheEEEecCCc--cC-cchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHhCCcccCCHHHHHHHHHH
Confidence 23788888753 22 236777664221 1 11 23456778899988431 22456789999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 498 WLAYRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 498 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|||+.+|++|||||||+|||+.++..+.++|.++ +.|||+||||++++..+||++++|++|++. +.|++.++..
T Consensus 159 ral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~-~~g~~~~~~~ 234 (250)
T PRK14266 159 RTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEII-ESGLTDQIFI 234 (250)
T ss_pred HHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEE-EeCCHHHHHh
Confidence 9999999999999999999999999999999875 468999999999999999999999999996 5789888753
No 470
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-37 Score=306.66 Aligned_cols=208 Identities=20% Similarity=0.343 Sum_probs=155.6
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CCCceeeeeechHHHHH-----H
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA--S---DMSSLEAVISCDEERLK-----L 142 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~--~---~~~~~~~~i~~~~~~~~-----~ 142 (582)
-+++|+++.|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+.+ + +.|. +.+++.... .
T Consensus 6 ~~~~~l~~~~~~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~----i~~~g~~i~~~~~~~ 81 (251)
T PRK14244 6 ASVKNLNLWYGSKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGE----LDIDGIDVYSVDTNV 81 (251)
T ss_pred EEeeeEEEEECCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceE----EEECCEehHhcccch
Confidence 468999999998899999999999999999999999999999999999875 2 3332 333222111 0
Q ss_pred HHHHHHhcc--ccCC--CcchHHHHHHH--HHcC--ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHH
Q 007982 143 EKEAEILGA--QEDG--GGEQLERVYER--LEAL--DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALA 211 (582)
Q Consensus 143 ~~~~~~~~~--~~~~--~~~~~~~~~~~--l~~~--~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LA 211 (582)
......+++ +... .....+++... .... ........+.++++.+|+.. ...++++.+|||||||||+||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~la 161 (251)
T PRK14244 82 VLLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKDSAFELSGGQQQRLCIA 161 (251)
T ss_pred HHHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhcChhhCCHHHHHHHHHH
Confidence 011122322 2211 11223333211 1111 12234456788999999853 235678999999999999999
Q ss_pred HHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 212 RALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 212 raL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
|||+.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||++++|++|+++. .|+.+++.
T Consensus 162 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~~ 236 (251)
T PRK14244 162 RAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVE-YNTTQEIF 236 (251)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEE-eCCHHHHh
Confidence 9999999999999999999999999999999876 5799999999999999999999999999974 46655543
No 471
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=307.08 Aligned_cols=213 Identities=22% Similarity=0.353 Sum_probs=161.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCcee--eeeechHHHH---HHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLE--AVISCDEERL---KLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~--~~i~~~~~~~---~~~~~~ 146 (582)
+|+++|++++|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+.+++.|.+. +.+.+++... ......
T Consensus 10 ~i~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~~~ 89 (257)
T PRK14246 10 VFNISRLYLYINDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIKLR 89 (257)
T ss_pred heeeeeEEEecCCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHHHh
Confidence 69999999999999999999999999999999999999999999999999887765431 2222221111 111111
Q ss_pred HHhc--cccCC---CcchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHHHHHh
Q 007982 147 EILG--AQEDG---GGEQLERVYERLE--AL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALARALF 215 (582)
Q Consensus 147 ~~~~--~~~~~---~~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LAraL~ 215 (582)
..++ ++... .....+++..... .. +......++.++++.+++.. ...++.+..||||||||++|||||+
T Consensus 90 ~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrl~laral~ 169 (257)
T PRK14246 90 KEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNSPASQLSGGQQQRLTIARALA 169 (257)
T ss_pred cceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcCCcccCCHHHHHHHHHHHHHH
Confidence 1222 12111 1123333322211 11 22344567889999999852 2457789999999999999999999
Q ss_pred cCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 216 INPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 216 ~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
.+|++|||||||++||+.++.++.++|.++ +.|||+|||+++++..+||++++|++|+++.+ |..+++.
T Consensus 170 ~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~-g~~~~~~ 240 (257)
T PRK14246 170 LKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEW-GSSNEIF 240 (257)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEE-CCHHHHH
Confidence 999999999999999999999999999876 47999999999999999999999999999754 5555543
No 472
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1.3e-36 Score=305.08 Aligned_cols=206 Identities=20% Similarity=0.294 Sum_probs=152.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCC--CCCCCceeeeeechHHHH---HHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIE--ASDMSSLEAVISCDEERL---KLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~--~~~~~~~~~~i~~~~~~~---~~~~~~ 146 (582)
+|+++||++.|+++.+|+++||+|++|++++|+||||||||||+++|+|+. +++.|.+ .+++... ......
T Consensus 1 ~i~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i----~~~g~~~~~~~~~~~~ 76 (248)
T PRK09580 1 MLSIKDLHVSVEDKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTV----EFKGKDLLELSPEDRA 76 (248)
T ss_pred CeEEEEEEEEeCCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEE----EECCCccccCCHHHHh
Confidence 478999999999889999999999999999999999999999999999984 4554432 2222111 000111
Q ss_pred -HHhcc--ccCCCc---chHHH---HHHHHHc------CChhHHHHHHHHHHHhCCCChhhhhccCC-CCChhHHHHHHH
Q 007982 147 -EILGA--QEDGGG---EQLER---VYERLEA------LDASTAEKRAAEILYGLGFNKTMQAKKTR-DFSGGWRMRIAL 210 (582)
Q Consensus 147 -~~~~~--~~~~~~---~~~~~---~~~~l~~------~~~~~~~~~~~~~l~~lgl~~~~~~~~~~-~LSGGqrqRv~L 210 (582)
..+++ +..... ..... +...+.. +........+.++++.+++.....++++. +|||||||||+|
T Consensus 77 ~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~l 156 (248)
T PRK09580 77 GEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDI 156 (248)
T ss_pred hcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHH
Confidence 11221 111100 00000 1111110 11223456678899999996445566675 899999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhh-cCeEEEEeCCeEEEEcCChh
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGV-CTNIIHMQNKQLKFYTGNFD 282 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~-~d~i~~l~~G~i~~~~g~~~ 282 (582)
||||+.+|++|||||||++||+.++.++.+.|+++ +.|||+||||++++..+ ||++++|++|+++ +.|+++
T Consensus 157 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~-~~g~~~ 231 (248)
T PRK09580 157 LQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIV-KSGDFT 231 (248)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEE-EeCCHH
Confidence 99999999999999999999999999999987654 57999999999999987 8999999999996 457665
No 473
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.2e-37 Score=281.19 Aligned_cols=205 Identities=21% Similarity=0.324 Sum_probs=156.2
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH----HHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL----KLEKEAE 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~ 147 (582)
+|.+++|.++|+..+. .++++|+.||+++|+|||||||||||++|+|+..|..|.+ .+++... ..++-..
T Consensus 1 ~l~L~~V~~~y~~~~~--~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i----~i~g~d~t~~~P~~RPVS 74 (231)
T COG3840 1 MLALDDVRFSYGHLPM--RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEI----LINGVDHTASPPAERPVS 74 (231)
T ss_pred CccccceEEeeCcceE--EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceE----EEcCeecCcCCcccCChh
Confidence 4678899999986543 4688999999999999999999999999999999886643 2222211 0111111
Q ss_pred HhccccCCCcchHHHHHHHHH-cC-----ChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 148 ILGAQEDGGGEQLERVYERLE-AL-----DASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~l~-~~-----~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
.+ +|..+ .+....+..++. ++ -....++++..++.++|+.. ..++.|.+|||||||||||||+|+++-+||
T Consensus 75 ml-FQEnN-LFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~-~~~RLP~~LSGGqRQRvALARclvR~~Pil 151 (231)
T COG3840 75 ML-FQENN-LFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAG-FLKRLPGELSGGQRQRVALARCLVREQPIL 151 (231)
T ss_pred hh-hhccc-cchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhh-HhhhCccccCchHHHHHHHHHHHhccCCeE
Confidence 11 22211 111122222221 11 12445678999999999975 568999999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 222 LLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
+||||+++|||.-+.++..++.++ +.|++||||.++.+..++|+++++++|+|. +.|..++++.
T Consensus 152 LLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~-~~g~~~~~~~ 219 (231)
T COG3840 152 LLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIA-AQGSTQELLS 219 (231)
T ss_pred EecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEE-eeccHHHHhc
Confidence 999999999999999998888654 679999999999999999999999999996 5677766653
No 474
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.3e-37 Score=344.60 Aligned_cols=202 Identities=26% Similarity=0.338 Sum_probs=171.2
Q ss_pred eEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 366 VLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 366 ~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
-++++||+|+|++. +++|+|+||+|++|+.+||+|+||||||||+++|+|+++|++|+|..++. ..++
T Consensus 341 ~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~ 420 (582)
T PRK11176 341 DIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVA 420 (582)
T ss_pred eEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhce
Confidence 59999999999753 67999999999999999999999999999999999999999999998763 3578
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCC-ChHHHHHHHHHhcCCCCccccCC----------CCCCChhHHHHHHHHHHHcc
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPG-NEEEKMRAAIGRFGLTGKAQVMP----------MKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gl~~~~~~~~----------~~~LSgGqkqrv~lAral~~ 502 (582)
|++|++. -++.|+.+++....+. .+.+++.++++.+|+.+.....| ...||||||||++|||||++
T Consensus 421 ~v~Q~~~---lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~ 497 (582)
T PRK11176 421 LVSQNVH---LFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLR 497 (582)
T ss_pred EEccCce---eecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHh
Confidence 9999853 3467888888654332 35677888888877654322211 25699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
+|++|||||||++||+++...+.+.|.+. ++|+|+|||+++.+. .||+|++|++|++.+ .|+.+++.+
T Consensus 498 ~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~-~~D~Ii~l~~g~i~e-~g~~~~l~~ 567 (582)
T PRK11176 498 DSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIE-KADEILVVEDGEIVE-RGTHAELLA 567 (582)
T ss_pred CCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHH-hCCEEEEEECCEEEE-eCCHHHHHh
Confidence 99999999999999999999999999886 579999999999874 699999999999986 888887754
No 475
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-37 Score=311.69 Aligned_cols=206 Identities=19% Similarity=0.303 Sum_probs=154.4
Q ss_pred ceEEeeeEEEEC-CeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhc
Q 007982 72 DIRIESLSVTFH-GHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILG 150 (582)
Q Consensus 72 ~i~v~nls~~y~-~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 150 (582)
+|+++|++++|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+.+|+.|.+ .+++...........++
T Consensus 6 ~l~~~~l~~~~~~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i----~~~g~~i~~~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKI----SILGQPTRQALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEE----EECCEEhHHhhccceEE
Confidence 589999999995 5789999999999999999999999999999999999988875543 22222111000001122
Q ss_pred c--ccCCC----c-chHHHHHHH-HH-----cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 151 A--QEDGG----G-EQLERVYER-LE-----ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 151 ~--~~~~~----~-~~~~~~~~~-l~-----~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
+ +.... . ...+.+... .. .......+.++.++++.+|+.+ ..++++.+|||||||||+|||||+.+
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~LSgG~~qrv~laraL~~~ 160 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVE-FRHRQIGELSGGQKKRVFLARAIAQQ 160 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChh-HhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 2 11110 0 111111100 00 0111233456788999999975 56889999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||+++++ +|+++. .|+.+++
T Consensus 161 p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~-~g~~~~~ 228 (272)
T PRK15056 161 GQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLA-SGPTETT 228 (272)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEe-ecCHHhc
Confidence 9999999999999999999999999765 579999999999999999999877 899864 4666543
No 476
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-37 Score=307.42 Aligned_cols=207 Identities=20% Similarity=0.332 Sum_probs=153.1
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCC--C---CCCceeeeeechHHHH-----
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEA--S---DMSSLEAVISCDEERL----- 140 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~--~---~~~~~~~~i~~~~~~~----- 140 (582)
.+|+++||+++|+++.+|+++||+|.+|++++|+|+||||||||+++|+|+.+ + +.|. +.+++...
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~----i~~~g~~~~~~~~ 79 (252)
T PRK14255 4 KIITSSDVHLFYGKFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGN----VSLRGQNIYAPNE 79 (252)
T ss_pred ceEEEEeEEEEECCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccE----EEEcCEEcccccc
Confidence 37999999999998899999999999999999999999999999999999854 3 2332 22222111
Q ss_pred HHHHHHHHhcc--ccCCC--cchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCC---hhhhhccCCCCChhHHHHHHH
Q 007982 141 KLEKEAEILGA--QEDGG--GEQLERVYERLE--AL-DASTAEKRAAEILYGLGFN---KTMQAKKTRDFSGGWRMRIAL 210 (582)
Q Consensus 141 ~~~~~~~~~~~--~~~~~--~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~---~~~~~~~~~~LSGGqrqRv~L 210 (582)
........+++ +.... ....+++..... .. .....+..+.+.++.+++. ....++++.+|||||||||+|
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~~~~LS~Gq~qrv~l 159 (252)
T PRK14255 80 DVVQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLHESALSLSGGQQQRVCI 159 (252)
T ss_pred cHHHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHhcCcccCCHHHHHHHHH
Confidence 00111112222 21111 122333322111 11 1122344567778888763 134578899999999999999
Q ss_pred HHHHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChh
Q 007982 211 ARALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFD 282 (582)
Q Consensus 211 AraL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~ 282 (582)
||||+.+|++|||||||++||+.++.++.++|+++ +.|+|+||||++++..+||+|++|++|+++.+ |+..
T Consensus 160 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~-~~~~ 232 (252)
T PRK14255 160 ARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEF-ADTK 232 (252)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEe-CCHH
Confidence 99999999999999999999999999999999876 47999999999999999999999999999764 4443
No 477
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.8e-37 Score=323.72 Aligned_cols=199 Identities=26% Similarity=0.361 Sum_probs=173.8
Q ss_pred CCCeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc------------e
Q 007982 363 PPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH------------L 430 (582)
Q Consensus 363 ~~~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~------------~ 430 (582)
.+++++++|++++|++ ..+|+++||+|++||++||+|.||||||||+|+|+|.++|++|+|.+++. .
T Consensus 5 ~~~ll~~~~i~K~Fgg-V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~ 83 (500)
T COG1129 5 TPPLLELRGISKSFGG-VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAA 83 (500)
T ss_pred ccceeeeecceEEcCC-ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhC
Confidence 3578999999999975 68999999999999999999999999999999999999999999998764 2
Q ss_pred eEEEechhhhhhcCCcccHHHHHHhcC-CC---------ChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHH
Q 007982 431 RIAQFHQHLAEKLDMDMSALQYMIKEY-PG---------NEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 431 ~~~~~~q~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral 500 (582)
-|..++|.+. +.+++|+.+++.... +. ...++++++|+++|+... .+.++.+||.||||.|.||||+
T Consensus 84 GI~~V~QEl~--L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-~~~~v~~LsiaqrQ~VeIArAl 160 (500)
T COG1129 84 GIATVHQELS--LVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-PDTLVGDLSIAQRQMVEIARAL 160 (500)
T ss_pred CcEEEeechh--ccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-hhhhhhhCCHHHHHHHHHHHHH
Confidence 3778899875 667889999885321 11 124568889999999644 5678999999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCC
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGD 566 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~ 566 (582)
..+++||||||||+.|+....+.|.+.++++ |.+||+|||.++++.++||||.||.+|+++. +.+
T Consensus 161 ~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~-~~~ 228 (500)
T COG1129 161 SFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVG-TRP 228 (500)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEee-ecc
Confidence 9999999999999999999999999988776 6799999999999999999999999999863 444
No 478
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.3e-37 Score=302.62 Aligned_cols=195 Identities=20% Similarity=0.272 Sum_probs=149.9
Q ss_pred cceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHHHHHHHHHhc
Q 007982 71 RDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLKLEKEAEILG 150 (582)
Q Consensus 71 ~~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 150 (582)
.+|+++|++++|+++.+|+++||+|++|++++|+|+||||||||+++|+|+.+++.|.+ .+++...........+.
T Consensus 10 ~~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i----~~~g~~i~~~~~~~~i~ 85 (214)
T PRK13543 10 PLLAAHALAFSRNEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQI----QIDGKTATRGDRSRFMA 85 (214)
T ss_pred ceEEEeeEEEecCCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeE----EECCEEccchhhhhceE
Confidence 37999999999998899999999999999999999999999999999999998876543 22221110000111122
Q ss_pred c--ccCC---CcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeecC
Q 007982 151 A--QEDG---GGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLDE 225 (582)
Q Consensus 151 ~--~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLDE 225 (582)
+ +... .....+++..... ......+..+.++++.+++.. ..++++.+|||||||||+||||++.+|++|||||
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~-~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~laral~~~p~llllDE 163 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCG-LHGRRAKQMPGSALAIVGLAG-YEDTLVRQLSAGQKKRLALARLWLSPAPLWLLDE 163 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHH-hcCCcHHHHHHHHHHHcCChh-hccCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 1 1111 1122233221111 111223456788999999975 4688999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeC
Q 007982 226 PTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQN 271 (582)
Q Consensus 226 Pt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~ 271 (582)
||++||+.++.++.++|.++ +.|+|++|||++++.++||++++|+.
T Consensus 164 Pt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 164 PYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 99999999999999999765 68999999999999999999999864
No 479
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-37 Score=312.24 Aligned_cols=210 Identities=24% Similarity=0.331 Sum_probs=159.3
Q ss_pred ceEEeeeEEEECC--eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHH
Q 007982 72 DIRIESLSVTFHG--HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~~--~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~ 146 (582)
+|+++|+++.|++ +.+|+++||+|++|++++|+||||||||||+++|+|+.+++.+. .|.+.+++... ......
T Consensus 5 ~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~-~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 5 IVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNP-NSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred eEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCC-CcEEEECCEECCcCCHHHHH
Confidence 6999999999975 46999999999999999999999999999999999998776410 01222222111 011111
Q ss_pred HHhc--cccC----CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 147 EILG--AQED----GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 147 ~~~~--~~~~----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
..++ ++.. ......+++..... ........+++.++++.+|+.+ ..++++.+|||||+|||+|||||+.+|
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-~~~~~~~~LS~G~~qrv~laral~~~P 162 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLD-YIDSEPANLSGGQKQRVAIAGILAVEP 162 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChh-HhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 2222 2211 11233333322111 2334455677899999999974 578999999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
++|||||||++||+.++..+.+.|+++ +.|||++||+++++. .||++++|++|+++. .|+.+++.
T Consensus 163 ~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~-~~d~i~~l~~G~i~~-~g~~~~~~ 231 (282)
T PRK13640 163 KIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEAN-MADQVLVLDDGKLLA-QGSPVEIF 231 (282)
T ss_pred CEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHH-hCCEEEEEECCEEEE-eCCHHHHh
Confidence 999999999999999999999998764 579999999999995 799999999999974 56666654
No 480
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-37 Score=304.09 Aligned_cols=206 Identities=27% Similarity=0.398 Sum_probs=157.8
Q ss_pred eEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-HHHHHHHhcc
Q 007982 73 IRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-LEKEAEILGA 151 (582)
Q Consensus 73 i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~ 151 (582)
|+++|++++|+++.+|+++||+|.+|++++|+|+||||||||+++|+|+.+++.|.+. +++.... .......+++
T Consensus 1 l~~~~l~~~~~~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~----~~g~~~~~~~~~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGGFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEIL----LDGKDITNLPPHKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEE----ECCEEcCcCChhhcceEE
Confidence 4689999999999999999999999999999999999999999999999988765432 2211110 0000111221
Q ss_pred --ccCC---CcchHHHHHHHH--HcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeec
Q 007982 152 --QEDG---GGEQLERVYERL--EALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLD 224 (582)
Q Consensus 152 --~~~~---~~~~~~~~~~~l--~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLD 224 (582)
+... .....+++.... ..........++.++++.+|+.+ ..++.+.+|||||+|||+|||||+.+|++||||
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~lS~G~~qrl~laral~~~p~llllD 155 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEG-YANRKPSQLSGGQQQRVAIARALVNEPKVLLLD 155 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCch-hhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 1111 112223322111 11223445567889999999974 568899999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 225 EPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 225 EPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||++||+.++.++.+.|+++ +.|||++||+++++..+||++++|++|++.. .|+.+++
T Consensus 156 EP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~-~~~~~~~ 218 (232)
T cd03300 156 EPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQ-IGTPEEI 218 (232)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEe-cCCHHHH
Confidence 999999999999999998764 6799999999999999999999999999974 4555443
No 481
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=9.4e-37 Score=343.05 Aligned_cols=201 Identities=27% Similarity=0.371 Sum_probs=172.0
Q ss_pred CeEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEE
Q 007982 365 PVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIA 433 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~ 433 (582)
.-++++|++|+|++++++|+|+||+|++|+++||+|+||||||||+++|+|+++|++|+|..++. ..++
T Consensus 339 ~~i~~~~v~f~y~~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~ 418 (592)
T PRK10790 339 GRIDIDNVSFAYRDDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVA 418 (592)
T ss_pred CeEEEEEEEEEeCCCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheE
Confidence 35899999999975567999999999999999999999999999999999999999999988763 3589
Q ss_pred EechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccC----------CCCCCChhHHHHHHHHHHHccC
Q 007982 434 QFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVM----------PMKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 434 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~----------~~~~LSgGqkqrv~lAral~~~ 503 (582)
|++|++. -++.|+.+++.... ..+.+++.++++.+|+.+..... ....||||||||++|||||+.+
T Consensus 419 ~v~Q~~~---lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~ 494 (592)
T PRK10790 419 MVQQDPV---VLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQT 494 (592)
T ss_pred EEccCCc---cccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhC
Confidence 9999864 35568888886543 34566788888888865433221 2357999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFK 571 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 571 (582)
|+||||||||++||+++...+.+.|.++ ++|+|+|||+++.+. .||+|++|++|++++ .|+.+++.
T Consensus 495 ~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~-~~D~ii~l~~G~i~~-~G~~~~L~ 562 (592)
T PRK10790 495 PQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIV-EADTILVLHRGQAVE-QGTHQQLL 562 (592)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHH-hCCEEEEEECCEEEE-EcCHHHHH
Confidence 9999999999999999999999999876 579999999999885 599999999999975 88888765
No 482
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.5e-37 Score=272.91 Aligned_cols=212 Identities=24% Similarity=0.385 Sum_probs=168.6
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee---eech--HHHH---HHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV---ISCD--EERL---KLE 143 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~---i~~~--~~~~---~~~ 143 (582)
.|+++|+++.||...+|-|++|+.+.||.+.|+||||+|||||++.|.-+..|..|.+... +.+. ..+. .++
T Consensus 2 sirv~~in~~yg~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p~sg~l~ia~~~fd~s~~~~~k~i~~lr 81 (242)
T COG4161 2 SIQLNGINCFYGAHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRDLR 81 (242)
T ss_pred ceEEcccccccccchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCCCCCeEEecccccccccCccHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999998887776654311 1111 1111 222
Q ss_pred HHHHHhccccC--CCcchHHHHHHH---HHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 144 KEAEILGAQED--GGGEQLERVYER---LEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 144 ~~~~~~~~~~~--~~~~~~~~~~~~---l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
+....++.+.. +...+.+++.+. ..++..++...++.++|+++.+.+ ..++.|-.|||||+|||+|||||+++|
T Consensus 82 ~~vgmvfqqy~lwphltv~enlieap~kv~gl~~~qa~~~a~ellkrlrl~~-~adr~plhlsggqqqrvaiaralmmkp 160 (242)
T COG4161 82 RNVGMVFQQYNLWPHLTVQENLIEAPCRVLGLSKDQALARAEKLLKRLRLKP-YADRYPLHLSGGQQQRVAIARALMMEP 160 (242)
T ss_pred HhhhhhhhhhccCchhHHHHHHHhhhHHHhCCCHHHHHHHHHHHHHHhcccc-ccccCceecccchhhhHHHHHHHhcCC
Confidence 22222222211 222344444432 235677888899999999999975 679999999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc---CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF---DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
++|++||||++|||+-...+.++|+++ |.|-++|||..+++..++.+|+.|++|+|+. .|+.+.|.
T Consensus 161 qvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~va~k~as~vvyme~g~ive-~g~a~~ft 229 (242)
T COG4161 161 QVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEVARKTASRVVYMENGHIVE-QGDASCFT 229 (242)
T ss_pred cEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhHHHhhhhheEeeecCeeEe-ecchhhcc
Confidence 999999999999999999999998876 6789999999999999999999999999974 57766554
No 483
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.7e-37 Score=290.25 Aligned_cols=210 Identities=22% Similarity=0.282 Sum_probs=159.0
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH---HHHHH-H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK---LEKEA-E 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~---~~~~~-~ 147 (582)
+++++||+..|+...+|.+|||++++||+++|+|+||+||||||++|+|+.++..|. +.+.+.++. ..+.. .
T Consensus 3 mL~v~~l~~~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~----I~~~G~dit~~p~~~r~r~ 78 (237)
T COG0410 3 MLEVENLSAGYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGR----IIFDGEDITGLPPHERARL 78 (237)
T ss_pred ceeEEeEeecccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCee----EEECCeecCCCCHHHHHhC
Confidence 799999999999999999999999999999999999999999999999999987543 333333221 11111 1
Q ss_pred HhccccC-----CCcchHHHHHHHHHcCChhHHHH-HHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 148 ILGAQED-----GGGEQLERVYERLEALDASTAEK-RAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 148 ~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~-~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
-+.+.+. +..++.+++.-............ ..+++.+.|---....+++..+|||||||.++|||||+.+|++|
T Consensus 79 Gi~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~PklL 158 (237)
T COG0410 79 GIAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQERDLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPKLL 158 (237)
T ss_pred CeEeCcccccchhhCcHHHHHhhhhhcccccccccccHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCCEE
Confidence 1222111 11223333321111111111222 26667777753345678899999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 222 LLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
+|||||.||-|.-++.|.+.|+++ +.||++|.++..++..++||.++|++|+++ +.|+.++...
T Consensus 159 LLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv-~~G~~~eL~~ 226 (237)
T COG0410 159 LLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIV-LSGTAAELLA 226 (237)
T ss_pred EecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEE-EecCHHHHhc
Confidence 999999999999999999998765 349999999999999999999999999997 5688777654
No 484
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=7.8e-37 Score=350.29 Aligned_cols=202 Identities=21% Similarity=0.320 Sum_probs=172.8
Q ss_pred eEEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeEEE
Q 007982 366 VLQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRIAQ 434 (582)
Q Consensus 366 ~l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~~~ 434 (582)
-|+++||+|+|++++++|+|+||+|++|+.+||+||||||||||+++|+|+++|++|+|..++. ..++|
T Consensus 473 ~I~~~~vsf~y~~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~ 552 (708)
T TIGR01193 473 DIVINDVSYSYGYGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDIDRHTLRQFINY 552 (708)
T ss_pred cEEEEEEEEEcCCCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcCHHHHHHheEE
Confidence 5899999999975568999999999999999999999999999999999999999999998763 25899
Q ss_pred echhhhhhcCCcccHHHHHHhc-CCCChHHHHHHHHHhcCCCCccccC----------CCCCCChhHHHHHHHHHHHccC
Q 007982 435 FHQHLAEKLDMDMSALQYMIKE-YPGNEEEKMRAAIGRFGLTGKAQVM----------PMKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 435 ~~q~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gl~~~~~~~----------~~~~LSgGqkqrv~lAral~~~ 503 (582)
++|+.. -+..|+.+++... .+..+.+++.++++.+|+.+..... ....||||||||++||||++++
T Consensus 553 v~Q~~~---lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRialARall~~ 629 (708)
T TIGR01193 553 LPQEPY---IFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIALARALLTD 629 (708)
T ss_pred EecCce---ehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHHHHHHhhC
Confidence 999863 3566889988754 2444566778888877765432211 2357999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc-CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW-DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~-~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|++|||||||++||+++...+.+.|.++ +.|+|+|||+++.+ ..||+|++|++|++++ .|+.+++.+
T Consensus 630 p~iliLDE~Ts~LD~~te~~i~~~L~~~~~~T~IiitHr~~~~-~~~D~i~~l~~G~i~~-~G~~~~L~~ 697 (708)
T TIGR01193 630 SKVLILDESTSNLDTITEKKIVNNLLNLQDKTIIFVAHRLSVA-KQSDKIIVLDHGKIIE-QGSHDELLD 697 (708)
T ss_pred CCEEEEeCccccCCHHHHHHHHHHHHHhcCCEEEEEecchHHH-HcCCEEEEEECCEEEE-ECCHHHHHh
Confidence 9999999999999999999999999876 57999999999988 5799999999999975 899888754
No 485
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=305.47 Aligned_cols=212 Identities=21% Similarity=0.335 Sum_probs=156.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCC-ceeeeeechHHHH-----HHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMS-SLEAVISCDEERL-----KLEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~-~~~~~i~~~~~~~-----~~~~~ 145 (582)
+|+++|++++|+++.+|+++||+|++|++++|+||||||||||+++|+|+.+++.+ ...|.+.+++... .....
T Consensus 4 ~l~~~~l~~~~~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~ 83 (251)
T PRK14249 4 KIKIRGVNFFYHKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNL 83 (251)
T ss_pred eEEEEEEEEEECCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHh
Confidence 68999999999988899999999999999999999999999999999999887520 0012222222111 00111
Q ss_pred HHHhcc--ccCCC--cchHHHHHHHHH--cCC-hhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHHHHHh
Q 007982 146 AEILGA--QEDGG--GEQLERVYERLE--ALD-ASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALARALF 215 (582)
Q Consensus 146 ~~~~~~--~~~~~--~~~~~~~~~~l~--~~~-~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LAraL~ 215 (582)
...+++ +.... ....+++..... ... ....+..+.++++.+++.. ...++++.+|||||||||+|||||+
T Consensus 84 ~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~Gq~qrv~laral~ 163 (251)
T PRK14249 84 RKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLHKSGLALSGGQQQRLCIARVLA 163 (251)
T ss_pred hceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhhCCcccCCHHHHHHHHHHHHHh
Confidence 122222 22111 122233321111 111 1223456777788888642 3457899999999999999999999
Q ss_pred cCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 216 INPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 216 ~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
.+|++|||||||++||+.++.++.++|+++ +.|||+||||++++..+||++++|++|+++. .|+.++.
T Consensus 164 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~-~~~~~~~ 233 (251)
T PRK14249 164 IEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVE-YGRTGEI 233 (251)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEE-eCCHHHH
Confidence 999999999999999999999999999876 4799999999999999999999999999974 4665554
No 486
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=306.63 Aligned_cols=213 Identities=23% Similarity=0.347 Sum_probs=157.9
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCc-eeeeeechHHHH-----HHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSS-LEAVISCDEERL-----KLEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~-~~~~i~~~~~~~-----~~~~~ 145 (582)
.|+++|+++.|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+.+++... ..|.+.+++... .....
T Consensus 7 ~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 86 (259)
T PRK14260 7 AIKVKDLSFYYNTSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRL 86 (259)
T ss_pred eEEEEEEEEEECCeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhh
Confidence 689999999999889999999999999999999999999999999999987642100 122233332211 00111
Q ss_pred HHHhcc--ccCC--CcchHHHHHHHHH--c-CChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHHHHHh
Q 007982 146 AEILGA--QEDG--GGEQLERVYERLE--A-LDASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALARALF 215 (582)
Q Consensus 146 ~~~~~~--~~~~--~~~~~~~~~~~l~--~-~~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LAraL~ 215 (582)
...+++ +... .....+++..... . .+......++.++++.+|+.. ...++++.+|||||||||+|||||+
T Consensus 87 ~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~ 166 (259)
T PRK14260 87 RRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKLNKSALGLSGGQQQRLCIARALA 166 (259)
T ss_pred hhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHHHHh
Confidence 112222 2211 1223333322111 1 122344566788899998742 3457889999999999999999999
Q ss_pred cCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEe-----CCeEEEEcCChhHHH
Q 007982 216 INPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQ-----NKQLKFYTGNFDQYV 285 (582)
Q Consensus 216 ~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~-----~G~i~~~~g~~~~~~ 285 (582)
.+|++|||||||++||+.++.++.++|+++ +.|||++||+++++..+||++++|+ +|+++. .|+.+++.
T Consensus 167 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~-~~~~~~~~ 242 (259)
T PRK14260 167 IKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVE-FGVTTQIF 242 (259)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEE-eCCHHHHh
Confidence 999999999999999999999999999876 4799999999999999999999998 599874 56766553
No 487
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1.9e-36 Score=294.12 Aligned_cols=172 Identities=23% Similarity=0.336 Sum_probs=140.8
Q ss_pred EEEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCC--CCCCCcEEEEcCce------------eE
Q 007982 367 LQFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGD--LVPLDGMVRRHNHL------------RI 432 (582)
Q Consensus 367 l~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl--~~p~~G~i~~~~~~------------~~ 432 (582)
|+++|+++.|++ +.+|+|+||+|.+|++++|+|+||||||||+++|+|+ ++|++|+|.+++.. .+
T Consensus 1 l~~~~l~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (200)
T cd03217 1 LEIKDLHVSVGG-KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLGI 79 (200)
T ss_pred CeEEEEEEEeCC-EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCcE
Confidence 468999999974 6799999999999999999999999999999999999 57999999876531 25
Q ss_pred EEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCC
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLLDEP 512 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlLDEP 512 (582)
+|++|... +....++ .+.+ .....+|||||+|||+|||+++.+|++||||||
T Consensus 80 ~~v~q~~~--~~~~~~~----------------~~~l----------~~~~~~LS~G~~qrv~laral~~~p~illlDEP 131 (200)
T cd03217 80 FLAFQYPP--EIPGVKN----------------ADFL----------RYVNEGFSGGEKKRNEILQLLLLEPDLAILDEP 131 (200)
T ss_pred EEeecChh--hccCccH----------------HHHH----------hhccccCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 55555432 1111111 1122 122258999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHhc---CceEEEEecCHHHHHh-hcCEEEEEeCCeEEEEcCCHH
Q 007982 513 TNHLDIETIDSLAEALNEW---DGGLVLVSHDFRLINQ-VAHEIWVCENQAVTRWEGDIM 568 (582)
Q Consensus 513 t~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~~~~~-~~d~i~~l~~G~i~~~~g~~~ 568 (582)
|++||+.++..+.+.|.++ +.|||++|||++++.. +||++++|++|++.. .|+.+
T Consensus 132 t~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~-~~~~~ 190 (200)
T cd03217 132 DSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVK-SGDKE 190 (200)
T ss_pred CccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEE-EccHH
Confidence 9999999999999998875 5799999999999988 799999999999974 66444
No 488
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=308.94 Aligned_cols=207 Identities=23% Similarity=0.323 Sum_probs=158.0
Q ss_pred ceEEeeeEEEECC--eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHHH
Q 007982 72 DIRIESLSVTFHG--HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKEA 146 (582)
Q Consensus 72 ~i~v~nls~~y~~--~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~~ 146 (582)
+|+++|+++.|++ +.+|+|+||+|++|++++|+||||||||||+++|+|+.+++.|.+ .+++... ......
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i----~~~g~~~~~~~~~~~~ 82 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEI----FYNNQAITDDNFEKLR 82 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEE----EECCEECCcCCHHHHH
Confidence 6999999999975 459999999999999999999999999999999999998876543 2222111 111111
Q ss_pred HHhcc--ccCC----CcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCC
Q 007982 147 EILGA--QEDG----GGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINP 218 (582)
Q Consensus 147 ~~~~~--~~~~----~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P 218 (582)
..+++ +... ......++..... .........++.++++.+|+.+ ..++++.+||||||||++|||||+.+|
T Consensus 83 ~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrl~laral~~~p 161 (269)
T PRK13648 83 KHIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLE-RADYEPNALSGGQKQRVAIAGVLALNP 161 (269)
T ss_pred hheeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCch-hhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 22222 2111 1112222222111 1233444567889999999974 567899999999999999999999999
Q ss_pred CceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 219 TILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 219 ~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
++|||||||++||+.++..+.++|+++ +.|||+|||+++++.. ||+|++|++|+++. .|+.+++.
T Consensus 162 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~-~d~i~~l~~G~i~~-~g~~~~~~ 230 (269)
T PRK13648 162 SVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAME-ADHVIVMNKGTVYK-EGTPTEIF 230 (269)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhc-CCEEEEEECCEEEE-ecCHHHHh
Confidence 999999999999999999999998764 5799999999999985 99999999999974 56666553
No 489
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-38 Score=288.91 Aligned_cols=211 Identities=24% Similarity=0.350 Sum_probs=163.9
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeee---e-echHHHHHHHHHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAV---I-SCDEERLKLEKEAE 147 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~---i-~~~~~~~~~~~~~~ 147 (582)
||+++||+|+|+++.+++++|++|++|.+++|||||||||||||.+++.+.+.+.|.+... + .++... +.+...
T Consensus 1 MI~i~nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d~G~i~i~g~~~~~~~s~~--LAk~lS 78 (252)
T COG4604 1 MITIENVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKDSGEITIDGLELTSTPSKE--LAKKLS 78 (252)
T ss_pred CeeehhhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccccCceEEEeeeecccCChHH--HHHHHH
Confidence 5899999999999999999999999999999999999999999999999998887654211 0 122211 111111
Q ss_pred HhccccC--CCcchHHHHHH----HHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCce
Q 007982 148 ILGAQED--GGGEQLERVYE----RLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTIL 221 (582)
Q Consensus 148 ~~~~~~~--~~~~~~~~~~~----~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lL 221 (582)
.+.+... ...++.+-+.+ .-.+....+.+..+.+.++.|+|.+ +.+++..+||||||||..||..++++.+++
T Consensus 79 ILkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~-l~dryLd~LSGGQrQRAfIAMVlaQdTdyv 157 (252)
T COG4604 79 ILKQENHINSRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLED-LSDRYLDELSGGQRQRAFIAMVLAQDTDYV 157 (252)
T ss_pred HHHhhchhhheeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccc-hHHHhHHhcccchhhhhhhheeeeccCcEE
Confidence 1111100 00111111100 0112234566778999999999974 789999999999999999999999999999
Q ss_pred eecCCCCCCCHHHHHHHHHHHhh----cCcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 222 LLDEPTNHLDLEACVWLEETLKK----FDRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 222 lLDEPt~~LD~~~~~~l~~~l~~----~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
+||||.|+||......+++.|++ +++||++|-||.+|+..++|+|+-|++|+++ ..|++++...
T Consensus 158 lLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINfAS~YsD~IVAlK~G~vv-~~G~~~eii~ 225 (252)
T COG4604 158 LLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINFASCYSDHIVALKNGKVV-KQGSPDEIIQ 225 (252)
T ss_pred EecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccHHHhhhhheeeecCCEEE-ecCCHHHhcC
Confidence 99999999999999999988865 5899999999999999999999999999997 5788887663
No 490
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.4e-36 Score=304.77 Aligned_cols=203 Identities=19% Similarity=0.226 Sum_probs=161.3
Q ss_pred CCeEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------ee
Q 007982 364 PPVLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LR 431 (582)
Q Consensus 364 ~~~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~ 431 (582)
...|+++|+++.|+.. ..+|+++||+|.+|++++|+|+||||||||+++|+|+++|++|+|.+.+. ..
T Consensus 17 ~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~ 96 (257)
T cd03288 17 GGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSR 96 (257)
T ss_pred CceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhhh
Confidence 4579999999999642 46999999999999999999999999999999999999999999987542 24
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHH---------Hhc--CCCCccccCCCCCCChhHHHHHHHHHHH
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAI---------GRF--GLTGKAQVMPMKNLSDGQRSRVVFAWLA 500 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~--gl~~~~~~~~~~~LSgGqkqrv~lAral 500 (582)
++|++|... + +..++.+++.... ......+..++ +.+ |+..... .++..|||||+|||+|||||
T Consensus 97 i~~v~q~~~--l-~~~tv~~nl~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~-~~~~~LS~G~~qrl~laral 171 (257)
T cd03288 97 LSIILQDPI--L-FSGSIRFNLDPEC-KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVT-EGGENFSVGQRQLFCLARAF 171 (257)
T ss_pred EEEECCCCc--c-cccHHHHhcCcCC-CCCHHHHHHHHHHhCcHHHHhhcccccCcEec-cCCCcCCHHHHHHHHHHHHH
Confidence 788888753 2 2345555543211 11122233333 333 4443332 34579999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHHH
Q 007982 501 YRQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKLH 573 (582)
Q Consensus 501 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~~ 573 (582)
+.+|++|||||||+|||+.++..+.+.+.++ +.|||++||+++.+.. ||+|++|++|+++ ..|+.+++...
T Consensus 172 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~-~dri~~l~~G~i~-~~g~~~~~~~~ 244 (257)
T cd03288 172 VRKSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILD-ADLVLVLSRGILV-ECDTPENLLAQ 244 (257)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHh-CCEEEEEECCEEE-EeCCHHHHHhc
Confidence 9999999999999999999999999998774 5799999999999975 9999999999997 57888877653
No 491
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-36 Score=340.55 Aligned_cols=203 Identities=25% Similarity=0.383 Sum_probs=175.1
Q ss_pred CeEEEEEEEEEecCC-ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------eeE
Q 007982 365 PVLQFVEVTFGYTPD-NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LRI 432 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~-~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~~ 432 (582)
+.|+++||+|+|+++ +++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|..++. ..+
T Consensus 337 ~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i 416 (574)
T PRK11160 337 VSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAI 416 (574)
T ss_pred CeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhhe
Confidence 469999999999753 57999999999999999999999999999999999999999999988753 248
Q ss_pred EEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCcccc---------CCCCCCChhHHHHHHHHHHHccC
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQV---------MPMKNLSDGQRSRVVFAWLAYRQ 503 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~---------~~~~~LSgGqkqrv~lAral~~~ 503 (582)
+|++|++. -++.|+.+++....+..+.+++.++++.+++.+.... .....||||||||++||||++++
T Consensus 417 ~~v~Q~~~---lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~p~GldT~vge~g~~LSgGqrqRialARall~~ 493 (574)
T PRK11160 417 SVVSQRVH---LFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLEDDKGLNAWLGEGGRQLSGGEQRRLGIARALLHD 493 (574)
T ss_pred eEEcccch---hhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcCccccCchhcCCCCCCCHHHHHHHHHHHHHhcC
Confidence 89999863 2456888888655454567788999999998765433 12457999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 504 PHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 504 p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
|++|||||||++||+++...+.+.|.++ +.|+|+|||+++.+. .||+|++|++|++++ .|+.+++.+
T Consensus 494 ~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~-~~d~i~~l~~G~i~~-~g~~~~l~~ 562 (574)
T PRK11160 494 APLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLE-QFDRICVMDNGQIIE-QGTHQELLA 562 (574)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHH-hCCEEEEEeCCeEEE-eCCHHHHHh
Confidence 9999999999999999999999999876 579999999999985 599999999999975 788887754
No 492
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-36 Score=306.05 Aligned_cols=213 Identities=21% Similarity=0.283 Sum_probs=156.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCC-ceeeeeechHHHHH-----HHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMS-SLEAVISCDEERLK-----LEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~-~~~~~i~~~~~~~~-----~~~~ 145 (582)
+|+++|+++.|+++.+|+|+||+|++|++++|+||||||||||+++|+|+..+... ...|.+.+++.... ....
T Consensus 6 ~i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (253)
T PRK14261 6 ILSTKNLNLWYGEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVAL 85 (253)
T ss_pred eEEEeeeEEEECCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhh
Confidence 79999999999999999999999999999999999999999999999998642100 00122333222110 1111
Q ss_pred HHHhcc--ccCCC--cchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHHHHHh
Q 007982 146 AEILGA--QEDGG--GEQLERVYERLE--AL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALARALF 215 (582)
Q Consensus 146 ~~~~~~--~~~~~--~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LAraL~ 215 (582)
...+++ +.... ....+++..... .. .....+..+.++++.+++.+ ...++++.+||||||||++|||||+
T Consensus 86 ~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~laral~ 165 (253)
T PRK14261 86 RRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLCIARTLA 165 (253)
T ss_pred hceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHHHHHHHh
Confidence 122222 22111 122233321111 11 12234556788888888742 2357889999999999999999999
Q ss_pred cCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHH
Q 007982 216 INPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYV 285 (582)
Q Consensus 216 ~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 285 (582)
.+|++|||||||++||+.++.++.++|+++ +.|||++||+++++..+||++++|++|+++. .|+.+++.
T Consensus 166 ~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~-~g~~~~~~ 236 (253)
T PRK14261 166 VNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIE-FDKTTQIF 236 (253)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEE-cCCHHHHH
Confidence 999999999999999999999999999876 4799999999999999999999999999974 56665543
No 493
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=9.6e-37 Score=320.90 Aligned_cols=200 Identities=21% Similarity=0.297 Sum_probs=152.8
Q ss_pred eeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHHH-------HHHHHHHh
Q 007982 77 SLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERLK-------LEKEAEIL 149 (582)
Q Consensus 77 nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~ 149 (582)
||+++|+++.+ ++||+|++|++++|+||||||||||+++|+|+.+|+.|.+. +++.... .......+
T Consensus 4 ~l~~~~~~~~~--~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~----~~g~~i~~~~~~~~~~~~~~~i 77 (354)
T TIGR02142 4 RFSKRLGDFSL--DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIV----LNGRTLFDSRKGIFLPPEKRRI 77 (354)
T ss_pred EEEEEECCEEE--EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEE----ECCEECccCccccccchhhCCe
Confidence 89999988764 99999999999999999999999999999999988765432 2221110 00111112
Q ss_pred c--cccCC---CcchHHHHHHHHHcCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcCCCceeec
Q 007982 150 G--AQEDG---GGEQLERVYERLEALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFINPTILLLD 224 (582)
Q Consensus 150 ~--~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~P~lLlLD 224 (582)
+ ++... .....+++...+........+.++.++++.+||.+ ..++++.+|||||||||+|||||+.+|++||||
T Consensus 78 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~-~~~~~~~~LSgGqkqRvalAraL~~~p~lllLD 156 (354)
T TIGR02142 78 GYVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGH-LLGRLPGRLSGGEKQRVAIGRALLSSPRLLLMD 156 (354)
T ss_pred EEEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChh-HhcCChhhCCHHHHHHHHHHHHHHcCCCEEEEc
Confidence 2 22211 12333343322222222334567899999999974 578999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHH
Q 007982 225 EPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQY 284 (582)
Q Consensus 225 EPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 284 (582)
|||++||+.++..+.+.|+++ +.|+|+||||++++..+||++++|++|+++. .|+.+++
T Consensus 157 EPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~-~g~~~~~ 219 (354)
T TIGR02142 157 EPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAA-AGPIAEV 219 (354)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEE-ECCHHHH
Confidence 999999999999999988764 6799999999999999999999999999974 4665543
No 494
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1e-36 Score=348.41 Aligned_cols=203 Identities=27% Similarity=0.350 Sum_probs=171.0
Q ss_pred CeEEEEEEEEEecC--CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------ee
Q 007982 365 PVLQFVEVTFGYTP--DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LR 431 (582)
Q Consensus 365 ~~l~~~~l~~~y~~--~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~ 431 (582)
..|+++||+|+|++ ++++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|..++. ..
T Consensus 477 ~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 556 (711)
T TIGR00958 477 GLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQ 556 (711)
T ss_pred CeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhh
Confidence 35999999999974 357999999999999999999999999999999999999999999988763 25
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccC----------CCCCCChhHHHHHHHHHHHc
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVM----------PMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~----------~~~~LSgGqkqrv~lAral~ 501 (582)
++|++|++. -+..|+.+++....+..+++++.++++..++.+..... ...+||||||||++||||++
T Consensus 557 i~~v~Q~~~---lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl 633 (711)
T TIGR00958 557 VALVGQEPV---LFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALV 633 (711)
T ss_pred ceEEecCcc---ccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHh
Confidence 899999863 35678899887554444567788888888775433221 13579999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhcCceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++|+||||||||++||+++...+.+.....+.|+|+|||+++.+. .||+|++|++|+|++ .|+.+++.+
T Consensus 634 ~~p~ILILDEpTSaLD~~te~~i~~~~~~~~~TvIiItHrl~~i~-~aD~IivL~~G~ive-~Gt~~eL~~ 702 (711)
T TIGR00958 634 RKPRVLILDEATSALDAECEQLLQESRSRASRTVLLIAHRLSTVE-RADQILVLKKGSVVE-MGTHKQLME 702 (711)
T ss_pred cCCCEEEEEccccccCHHHHHHHHHhhccCCCeEEEEeccHHHHH-hCCEEEEEECCEEEE-eeCHHHHHh
Confidence 999999999999999999999998833334689999999999884 699999999999975 899888765
No 495
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.9e-37 Score=349.96 Aligned_cols=203 Identities=27% Similarity=0.352 Sum_probs=172.7
Q ss_pred CeEEEEEEEEEecCC--ceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc-----------ee
Q 007982 365 PVLQFVEVTFGYTPD--NLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH-----------LR 431 (582)
Q Consensus 365 ~~l~~~~l~~~y~~~--~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~-----------~~ 431 (582)
..++++||+|+||.. ..+|+|+||.|++|+.+||||||||||||++++|.++|.|++|+|..++. ..
T Consensus 349 g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~ 428 (1228)
T KOG0055|consen 349 GEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQ 428 (1228)
T ss_pred cceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhh
Confidence 469999999999854 36999999999999999999999999999999999999999999998764 25
Q ss_pred EEEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCcccc----------CCCCCCChhHHHHHHHHHHHc
Q 007982 432 IAQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQV----------MPMKNLSDGQRSRVVFAWLAY 501 (582)
Q Consensus 432 ~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----------~~~~~LSgGqkqrv~lAral~ 501 (582)
+|.+.|.+ .-+..|+.+++....+....+++.++++..+..++... ..-.+|||||||||+|||||+
T Consensus 429 iglV~QeP---vlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv 505 (1228)
T KOG0055|consen 429 IGLVSQEP---VLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALV 505 (1228)
T ss_pred cCeeeech---hhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHH
Confidence 78888886 34678999999877666666666666655443222111 112479999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHhc--CceEEEEecCHHHHHhhcCEEEEEeCCeEEEEcCCHHHHHH
Q 007982 502 RQPHMLLLDEPTNHLDIETIDSLAEALNEW--DGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKL 572 (582)
Q Consensus 502 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 572 (582)
++|+||||||||++||+++...+.++|.+. +.|.|+|+|++..+.. ||+|++|++|+|++ .|+.+++.+
T Consensus 506 ~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrn-aD~I~v~~~G~IvE-~G~h~ELi~ 576 (1228)
T KOG0055|consen 506 RNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRN-ADKIAVMEEGKIVE-QGTHDELIA 576 (1228)
T ss_pred hCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhc-cCEEEEEECCEEEE-ecCHHHHHh
Confidence 999999999999999999999999999886 6799999999999976 99999999999975 899988765
No 496
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=310.52 Aligned_cols=208 Identities=20% Similarity=0.288 Sum_probs=159.9
Q ss_pred ceEEeeeEEEECC---eeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCceeeeeechHHHH---HHHHH
Q 007982 72 DIRIESLSVTFHG---HDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSSLEAVISCDEERL---KLEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~---~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~~~~~i~~~~~~~---~~~~~ 145 (582)
+|+++||+++|++ ..+|+|+||+|++|++++|+|+||||||||+++|+|+.+++.|.+. +++... .....
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~----~~g~~i~~~~~~~~ 79 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVK----IDGELLTAENVWNL 79 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEE----ECCEECCcCCHHHH
Confidence 6999999999974 3599999999999999999999999999999999999988766432 221111 01111
Q ss_pred HHHhc--cccC----CCcchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCChhhhhccCCCCChhHHHHHHHHHHHhcC
Q 007982 146 AEILG--AQED----GGGEQLERVYERLE--ALDASTAEKRAAEILYGLGFNKTMQAKKTRDFSGGWRMRIALARALFIN 217 (582)
Q Consensus 146 ~~~~~--~~~~----~~~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~~LSGGqrqRv~LAraL~~~ 217 (582)
...++ ++.. ......+++..... ........+++.++++.+|+.. ..++++.+|||||+|||+|||||+.+
T Consensus 80 ~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-~~~~~~~~LS~G~~qrv~lAraL~~~ 158 (277)
T PRK13642 80 RRKIGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLD-FKTREPARLSGGQKQRVAVAGIIALR 158 (277)
T ss_pred hcceEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHh-HhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 12222 2221 11223333322111 2233444567889999999964 57889999999999999999999999
Q ss_pred CCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeCCeEEEEcCChhHHHH
Q 007982 218 PTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQNKQLKFYTGNFDQYVQ 286 (582)
Q Consensus 218 P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 286 (582)
|++|||||||++||+.++..+.+.|+++ +.|||+||||++++. .||+|++|++|+++ ..|+++++..
T Consensus 159 p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~-~~d~i~~l~~G~i~-~~g~~~~~~~ 229 (277)
T PRK13642 159 PEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAA-SSDRILVMKAGEII-KEAAPSELFA 229 (277)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH-hCCEEEEEECCEEE-EeCCHHHHhc
Confidence 9999999999999999999999998654 679999999999997 69999999999996 4577776653
No 497
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.6e-36 Score=298.53 Aligned_cols=187 Identities=25% Similarity=0.348 Sum_probs=150.0
Q ss_pred EEEEEEEEecCCceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCCCCCCcEEEEcCc---------------eeE
Q 007982 368 QFVEVTFGYTPDNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNH---------------LRI 432 (582)
Q Consensus 368 ~~~~l~~~y~~~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~~p~~G~i~~~~~---------------~~~ 432 (582)
.+.|+.|+|+++.++|+|+||+|.+|++++|+||||||||||+++|+|+++|++|+|...+. ..+
T Consensus 2 ~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 81 (218)
T cd03290 2 QVTNGYFSWGSGLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYSV 81 (218)
T ss_pred eeeeeEEecCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcceE
Confidence 57899999976567999999999999999999999999999999999999999999987542 247
Q ss_pred EEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCcc----------ccCCCCCCChhHHHHHHHHHHHcc
Q 007982 433 AQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKA----------QVMPMKNLSDGQRSRVVFAWLAYR 502 (582)
Q Consensus 433 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~~~LSgGqkqrv~lAral~~ 502 (582)
+|++|.+. + +..++.+++...... ....+.++++.+++.... ...++..|||||+|||+|||+++.
T Consensus 82 ~~~~q~~~--~-~~~t~~~nl~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~ 157 (218)
T cd03290 82 AYAAQKPW--L-LNATVEENITFGSPF-NKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQ 157 (218)
T ss_pred EEEcCCCc--c-ccccHHHHHhhcCcC-CHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhh
Confidence 78888753 2 245777776542221 223345666666664321 123568999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHH--HHH---hcCceEEEEecCHHHHHhhcCEEEEEeCCe
Q 007982 503 QPHMLLLDEPTNHLDIETIDSLAE--ALN---EWDGGLVLVSHDFRLINQVAHEIWVCENQA 559 (582)
Q Consensus 503 ~p~lLlLDEPt~~LD~~~~~~l~~--~l~---~~~~tvi~vsHd~~~~~~~~d~i~~l~~G~ 559 (582)
+|++|||||||++||+.++..+.+ +++ +.+.|||++|||++++. .||++++|++|.
T Consensus 158 ~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~-~~d~i~~l~~G~ 218 (218)
T cd03290 158 NTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLP-HADWIIAMKDGS 218 (218)
T ss_pred CCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHh-hCCEEEEecCCC
Confidence 999999999999999999988776 343 44689999999999985 699999998873
No 498
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.6e-36 Score=293.06 Aligned_cols=172 Identities=24% Similarity=0.327 Sum_probs=143.6
Q ss_pred CeEEEEEEEEEecC-----CceeeEeeeEEEecCCEEEEEcCCCCcHHHHHHHHhCCC--CCCCcEEEEcCc--------
Q 007982 365 PVLQFVEVTFGYTP-----DNLIYKNLDFGVDLDSRVALVGPNGAGKSTLLKLMTGDL--VPLDGMVRRHNH-------- 429 (582)
Q Consensus 365 ~~l~~~~l~~~y~~-----~~~~l~~vsl~i~~Ge~~aivG~NGsGKSTLl~ll~Gl~--~p~~G~i~~~~~-------- 429 (582)
+.|+++|+++.|++ .+++|+++||+|.+|++++|+||||||||||+++|+|++ +|++|+|.+.+.
T Consensus 2 ~~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~ 81 (194)
T cd03213 2 VTLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDKRSFR 81 (194)
T ss_pred cEEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCchHhhh
Confidence 35899999999975 257999999999999999999999999999999999999 999999987653
Q ss_pred eeEEEechhhhhhcCCcccHHHHHHhcCCCChHHHHHHHHHhcCCCCccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 007982 430 LRIAQFHQHLAEKLDMDMSALQYMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVVFAWLAYRQPHMLLL 509 (582)
Q Consensus 430 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LSgGqkqrv~lAral~~~p~lLlL 509 (582)
..++|++|... +....++.+++... ..+ .+|||||+|||+|||||+.+|++|||
T Consensus 82 ~~i~~~~q~~~--~~~~~t~~~~i~~~-------------~~~-----------~~LS~G~~qrv~laral~~~p~illl 135 (194)
T cd03213 82 KIIGYVPQDDI--LHPTLTVRETLMFA-------------AKL-----------RGLSGGERKRVSIALELVSNPSLLFL 135 (194)
T ss_pred heEEEccCccc--CCCCCcHHHHHHHH-------------HHh-----------ccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 23667776632 22334555443210 000 17999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHhc---CceEEEEecCHH-HHHhhcCEEEEEeCCeEEE
Q 007982 510 DEPTNHLDIETIDSLAEALNEW---DGGLVLVSHDFR-LINQVAHEIWVCENQAVTR 562 (582)
Q Consensus 510 DEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~G~i~~ 562 (582)
||||++||+.++..+.+.|+++ +.|||++|||++ ++..+||++++|++|++..
T Consensus 136 DEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~ 192 (194)
T cd03213 136 DEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIY 192 (194)
T ss_pred eCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEe
Confidence 9999999999999999998875 569999999996 7888999999999999863
No 499
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-36 Score=305.79 Aligned_cols=213 Identities=20% Similarity=0.313 Sum_probs=157.9
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCCCCCc-eeeeeechHHHHH-----HHHH
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEASDMSS-LEAVISCDEERLK-----LEKE 145 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~~~~~-~~~~i~~~~~~~~-----~~~~ 145 (582)
.|+++|++++|++..+|+|+||+|++|++++|+|+||||||||+++|+|+.++++.. ..+.+.+++.... ....
T Consensus 7 ~l~~~nl~~~~~~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~ 86 (261)
T PRK14258 7 AIKVNNLSFYYDTQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRL 86 (261)
T ss_pred eEEEeeEEEEeCCeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHh
Confidence 699999999999888999999999999999999999999999999999998874110 1122333222110 0111
Q ss_pred HHHhcc--ccCCC--cchHHHHHHHHH--cC-ChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHHHHHh
Q 007982 146 AEILGA--QEDGG--GEQLERVYERLE--AL-DASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALARALF 215 (582)
Q Consensus 146 ~~~~~~--~~~~~--~~~~~~~~~~l~--~~-~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LAraL~ 215 (582)
...+++ +.... ....+++..... .. +......++.++++.+++.. ...++++.+|||||+|||+|||||+
T Consensus 87 ~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrv~laral~ 166 (261)
T PRK14258 87 RRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHKSALDLSGGQQQRLCIARALA 166 (261)
T ss_pred hccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcCCcccCCHHHHHHHHHHHHHh
Confidence 112222 21111 122222221111 11 22233456788999998742 2457889999999999999999999
Q ss_pred cCCCceeecCCCCCCCHHHHHHHHHHHhhc----CcEEEEEecCHHHHHhhcCeEEEEeC-----CeEEEEcCChhHHH
Q 007982 216 INPTILLLDEPTNHLDLEACVWLEETLKKF----DRILVVISHSQDFLNGVCTNIIHMQN-----KQLKFYTGNFDQYV 285 (582)
Q Consensus 216 ~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~----~~tviivsHd~~~~~~~~d~i~~l~~-----G~i~~~~g~~~~~~ 285 (582)
.+|++|||||||++||+.++..+.+.|+++ +.|||+||||++++..+||+|++|++ |+++ +.|+.+++.
T Consensus 167 ~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~-~~~~~~~~~ 244 (261)
T PRK14258 167 VKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV-EFGLTKKIF 244 (261)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE-EeCCHHHHH
Confidence 999999999999999999999999988763 67999999999999999999999999 9987 457766553
No 500
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-36 Score=306.90 Aligned_cols=208 Identities=17% Similarity=0.284 Sum_probs=154.3
Q ss_pred ceEEeeeEEEECCeeeeEeeeEEEeCCcEEEEECCCCCcHHHHHHHHhcCCCC-----CCCceeeeeechHHHH-----H
Q 007982 72 DIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGEIEAS-----DMSSLEAVISCDEERL-----K 141 (582)
Q Consensus 72 ~i~v~nls~~y~~~~il~~vsl~i~~Ge~~~LvG~NGsGKSTLl~~l~~~~~~-----~~~~~~~~i~~~~~~~-----~ 141 (582)
+|+++||+++|+++.+|+|+||+|++|++++|+|+||||||||+++|+|+..+ +.|. +.+++... .
T Consensus 10 ~l~i~~v~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~----i~~~g~~i~~~~~~ 85 (264)
T PRK14243 10 VLRTENLNVYYGSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGK----VTFHGKNLYAPDVD 85 (264)
T ss_pred EEEEeeeEEEECCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceE----EEECCEEccccccC
Confidence 79999999999988999999999999999999999999999999999998642 3332 22222111 0
Q ss_pred HHHHHHHhcc--ccCCC--cchHHHHHHHHH--cCChhHHHHHHHHHHHhCCCCh---hhhhccCCCCChhHHHHHHHHH
Q 007982 142 LEKEAEILGA--QEDGG--GEQLERVYERLE--ALDASTAEKRAAEILYGLGFNK---TMQAKKTRDFSGGWRMRIALAR 212 (582)
Q Consensus 142 ~~~~~~~~~~--~~~~~--~~~~~~~~~~l~--~~~~~~~~~~~~~~l~~lgl~~---~~~~~~~~~LSGGqrqRv~LAr 212 (582)
.......+++ +.... ....+++..... ... ....+++.++++.+++.. ...++++.+|||||||||+|||
T Consensus 86 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~LSgGq~qrv~lar 164 (264)
T PRK14243 86 PVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYK-GDMDELVERSLRQAALWDEVKDKLKQSGLSLSGGQQQRLCIAR 164 (264)
T ss_pred hHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcc-hHHHHHHHHHHHHhCchhhHHHHhcCCcccCCHHHHHHHHHHH
Confidence 1111122322 22111 122222221111 111 123455677788887742 2356789999999999999999
Q ss_pred HHhcCCCceeecCCCCCCCHHHHHHHHHHHhhc--CcEEEEEecCHHHHHhhcCeEEEEe---------CCeEEEEcCCh
Q 007982 213 ALFINPTILLLDEPTNHLDLEACVWLEETLKKF--DRILVVISHSQDFLNGVCTNIIHMQ---------NKQLKFYTGNF 281 (582)
Q Consensus 213 aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tviivsHd~~~~~~~~d~i~~l~---------~G~i~~~~g~~ 281 (582)
||+.+|++|||||||++||+.++.++.++|.++ +.|||++|||++++..+||++++|+ +|+++ ..|+.
T Consensus 165 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~-~~~~~ 243 (264)
T PRK14243 165 AIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLV-EFDRT 243 (264)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEE-EeCCH
Confidence 999999999999999999999999999999876 4699999999999999999999998 79987 45666
Q ss_pred hHHH
Q 007982 282 DQYV 285 (582)
Q Consensus 282 ~~~~ 285 (582)
+++.
T Consensus 244 ~~~~ 247 (264)
T PRK14243 244 EKIF 247 (264)
T ss_pred HHHH
Confidence 6654
Done!