Citrus Sinensis ID: 007983
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 582 | ||||||
| 255578664 | 617 | ETHYLENE-INSENSITIVE3 protein, putative | 0.987 | 0.931 | 0.739 | 0.0 | |
| 224131746 | 617 | ethylene-insensitive 3b [Populus trichoc | 0.993 | 0.936 | 0.727 | 0.0 | |
| 224102883 | 631 | ethylene-insensitive 3a [Populus trichoc | 0.991 | 0.914 | 0.711 | 0.0 | |
| 356549557 | 621 | PREDICTED: protein ETHYLENE INSENSITIVE | 0.991 | 0.929 | 0.700 | 0.0 | |
| 449452725 | 622 | PREDICTED: protein ETHYLENE INSENSITIVE | 0.993 | 0.929 | 0.705 | 0.0 | |
| 449529347 | 632 | PREDICTED: protein ETHYLENE INSENSITIVE | 0.994 | 0.916 | 0.697 | 0.0 | |
| 388890587 | 635 | ethylene-insensitive 3 [Cucumis sativus] | 0.994 | 0.911 | 0.693 | 0.0 | |
| 356575060 | 624 | PREDICTED: protein ETHYLENE INSENSITIVE | 0.986 | 0.919 | 0.684 | 0.0 | |
| 15425733 | 693 | EIN3-like protein [Cucumis melo] | 0.979 | 0.822 | 0.707 | 0.0 | |
| 356554294 | 610 | PREDICTED: protein ETHYLENE INSENSITIVE | 0.970 | 0.926 | 0.668 | 0.0 |
| >gi|255578664|ref|XP_002530192.1| ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis] gi|223530285|gb|EEF32182.1| ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/622 (73%), Positives = 518/622 (83%), Gaps = 47/622 (7%)
Query: 2 MMSFDEMGFCGDMNFFSAPLGDADMAVQPSEPEATVEDDYTDEEMDVDELERRMWKDKMR 61
MM FDE+GFCGDM+FFS+ LG+ D+A Q +E E TVEDDY+DEE+DVDELERRMW+DKMR
Sbjct: 1 MMMFDEIGFCGDMDFFSSSLGE-DVAAQQAEHEPTVEDDYSDEEIDVDELERRMWRDKMR 59
Query: 62 LKRLKEQSRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIP 121
LK+LKEQ++ KEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIP
Sbjct: 60 LKKLKEQNKSKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIP 119
Query: 122 EKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSVPGKNEGINAIGPTPHTLQEL 181
EKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNS+PGKNEG N+IGPTPHTLQEL
Sbjct: 120 EKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSIPGKNEGCNSIGPTPHTLQEL 179
Query: 182 QDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKDQGAPPYKKPH 241
QDTTLGSLLSALMQHCDPPQRRFPLEKGV PPWWP G EEWWPQLGLPKDQG PPYKKPH
Sbjct: 180 QDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGNEEWWPQLGLPKDQGPPPYKKPH 239
Query: 242 DLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARE 301
DLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARE
Sbjct: 240 DLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARE 299
Query: 302 LYPESCTVLSSSAGSGSLVINDCNEYDVEGAEDEPNFDVQECKPQNLISSSLGMERMRER 361
LYP+SC L SSAGSGSL+I+DC+EYDVEG EDEPNFDVQECKP++L SS LGMERMRER
Sbjct: 300 LYPDSCPPL-SSAGSGSLIIHDCSEYDVEGIEDEPNFDVQECKPEHLNSSGLGMERMRER 358
Query: 362 LPNQQPPYAIKGEVVSNFDFVRKRKPSNDLSMKMDQHIYTCEYLQCPYSDPRLGYRDRTS 421
LP +QP Y IKGE++S DF+RKRKPS+D++M +DQ +YTCE++QCPYS RLG+ DRTS
Sbjct: 359 LPLRQPSYPIKGELISTVDFIRKRKPSSDINMMVDQKVYTCEFVQCPYSQLRLGFHDRTS 418
Query: 422 RDNHQLTCPYKSGASEFG-------------------------------------LGVPE 444
RDNHQLTCPY+S + EFG GVPE
Sbjct: 419 RDNHQLTCPYRSSSLEFGGSNFHVNEVKPVIFPQPCAQPKPAASMVNNAPPAFDLSGVPE 478
Query: 445 DGQKMISELMSIYDNNIQGNRNVNPGNNAVVTEGQNTLQPRAQHQQE-YYHGQGAVMDGN 503
DGQKMISELMSIYD N+QGN+N GNN VTEG N QP+ HQQ+ Y+ Q VMD N
Sbjct: 479 DGQKMISELMSIYDTNVQGNKNS--GNNQ-VTEGHNLFQPKIHHQQDNYFRSQSNVMDAN 535
Query: 504 LFEGSNMHENNHLMFTREENQFDRFKIMNSPFE--NNSSGSNNNFSLMFESPFDLGSFDY 561
+FE SN+H NNH MF+++ +QFDRFK +NSPFE N + +N++F+LMF SPFDL SFDY
Sbjct: 536 IFEDSNIH-NNHQMFSQDGSQFDRFKALNSPFESSNQHNNNNSSFNLMFGSPFDLSSFDY 594
Query: 562 KEDFQAAGVDTMPK-HDSSVWF 582
KED Q ++++PK D+++WF
Sbjct: 595 KEDLQGLAMESLPKQQDAAIWF 616
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224131746|ref|XP_002328098.1| ethylene-insensitive 3b [Populus trichocarpa] gi|222837613|gb|EEE75978.1| ethylene-insensitive 3b [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224102883|ref|XP_002312841.1| ethylene-insensitive 3a [Populus trichocarpa] gi|222849249|gb|EEE86796.1| ethylene-insensitive 3a [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356549557|ref|XP_003543159.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449452725|ref|XP_004144109.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449529347|ref|XP_004171661.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|388890587|gb|AFK80347.1| ethylene-insensitive 3 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356575060|ref|XP_003555660.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|15425733|dbj|BAB64344.1| EIN3-like protein [Cucumis melo] | Back alignment and taxonomy information |
|---|
| >gi|356554294|ref|XP_003545483.1| PREDICTED: protein ETHYLENE INSENSITIVE 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 582 | ||||||
| TAIR|locus:2091906 | 628 | EIN3 "ETHYLENE-INSENSITIVE3" [ | 0.738 | 0.684 | 0.718 | 1.7e-191 | |
| TAIR|locus:2059247 | 584 | EIL1 "ETHYLENE-INSENSITIVE3-li | 0.948 | 0.945 | 0.572 | 1.9e-170 | |
| TAIR|locus:2027754 | 567 | EIL3 "ETHYLENE-INSENSITIVE3-li | 0.544 | 0.559 | 0.584 | 2.3e-101 | |
| TAIR|locus:2178988 | 518 | EIL2 "ETHYLENE-INSENSITIVE3-li | 0.460 | 0.517 | 0.591 | 2e-100 | |
| TAIR|locus:2184088 | 471 | AT5G10120 [Arabidopsis thalian | 0.460 | 0.569 | 0.581 | 1.8e-95 | |
| TAIR|locus:2171815 | 557 | AT5G65100 [Arabidopsis thalian | 0.697 | 0.728 | 0.427 | 2.7e-84 |
| TAIR|locus:2091906 EIN3 "ETHYLENE-INSENSITIVE3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1685 (598.2 bits), Expect = 1.7e-191, Sum P(2) = 1.7e-191
Identities = 317/441 (71%), Positives = 361/441 (81%)
Query: 3 MSFDEMGFCGDMNFFSA-PLGDADMAVQP-SEPEATVEDDYTDEEMDVDELERRMWKDKM 60
M F+EMG CG+M+FFS+ LG+ D P +EP++ VEDDYTD+E+DVDELERRMW+DKM
Sbjct: 1 MMFNEMGMCGNMDFFSSGSLGEVDFCPVPQAEPDSIVEDDYTDDEIDVDELERRMWRDKM 60
Query: 61 RLKRLKEQSRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGII 120
RLKRLKEQ +GKEG+D AKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGII
Sbjct: 61 RLKRLKEQDKGKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGII 120
Query: 121 PEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSVPGKNEGINAIGPTPHTLQE 180
PE GKPVTGASDNLREWWKDKVRFDRNGPAAI KYQA+N++PG +EG N IGPTPHTLQE
Sbjct: 121 PENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPGIHEGNNPIGPTPHTLQE 180
Query: 181 LQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKDQGAPPYKKP 240
LQDTTLGSLLSALMQHCDPPQRRFPLEKGV PPWWP GKE+WWPQLGLPKDQG PYKKP
Sbjct: 181 LQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGKEDWWPQLGLPKDQGPAPYKKP 240
Query: 241 HDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALAR 300
HDLKKAWKVGVLTAVIKHM PDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEE+LAR
Sbjct: 241 HDLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLAR 300
Query: 301 ELYPESCTXXXXXXXXXXXXINDCNEYDVEGAEDEPNFDVQECKPQNLISSS-LGMERMR 359
ELYPESC +NDC++YDVEG E E +++V+E KP+ +++SS GM
Sbjct: 301 ELYPESCPPLSLSGGSCSLLMNDCSQYDVEGFEKESHYEVEELKPEKVMNSSNFGMVAKM 360
Query: 360 ERLPNQQPPYAIKGEV-VSNFDFVRKRKPSNDLSMKMDQHIYTCEYLQCPYSDPRLGYRD 418
P +K EV N +F+RKRKP+ DL+ MD+ ++TCE L C +S+ G+ D
Sbjct: 361 HDFP-------VKEEVPAGNSEFMRKRKPNRDLNTIMDRTVFTCENLGCAHSEISRGFLD 413
Query: 419 RTSRDNHQLTCPYKSGASEFG 439
R SRDNHQL CP++ +G
Sbjct: 414 RNSRDNHQLACPHRDSRLPYG 434
|
|
| TAIR|locus:2059247 EIL1 "ETHYLENE-INSENSITIVE3-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2027754 EIL3 "ETHYLENE-INSENSITIVE3-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178988 EIL2 "ETHYLENE-INSENSITIVE3-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2184088 AT5G10120 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2171815 AT5G65100 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| EIN3B | ethylene-insensitive 3b (617 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 582 | |||
| PLN03109 | 599 | PLN03109, PLN03109, ETHYLENE-INSENSITIVE3-like3 pr | 1e-164 | |
| pfam04873 | 332 | pfam04873, EIN3, Ethylene insensitive 3 | 1e-111 |
| >gnl|CDD|215581 PLN03109, PLN03109, ETHYLENE-INSENSITIVE3-like3 protein; Provisional | Back alignment and domain information |
|---|
Score = 481 bits (1240), Expect = e-164
Identities = 210/374 (56%), Positives = 268/374 (71%), Gaps = 16/374 (4%)
Query: 12 GDMNFFSAPLGDA-DMAVQPSEPEATVEDDYTDEEMDVDELERRMWKDKMRLKRLKE-QS 69
G + +A LGD+ D V + E+D +DEE++ ++LERRMWKD+++LKR+KE Q
Sbjct: 2 GHLAILAAELGDSSDFEVDGIRCDNLTENDVSDEEIEAEDLERRMWKDRIKLKRIKERQK 61
Query: 70 RGKEG-IDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVT 128
+ ++ ++ +K ++ +QARRKKMSRAQDGILKYMLK+MEVCKA+GFVYGIIPEKGKPV+
Sbjct: 62 KLQQAALEKSKPKKISDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVS 121
Query: 129 GASDNLREWWKDKVRFDRNGPAAIAKYQADNSVPGKNEGINAIGPTPHTLQELQDTTLGS 188
GASDN+R WWK+KV+FD+NGPAAIAKY+A+ G+ E + H+LQ+LQD TLGS
Sbjct: 122 GASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMGEAESSGNN--SQHSLQDLQDATLGS 179
Query: 189 LLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKDQGAPPYKKPHDLKKAWK 248
LLS+LMQHCDPPQR++PLEKGV PPWWP+G E+WW +LGLPK Q +PPYKKPHDLKK WK
Sbjct: 180 LLSSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWVKLGLPKGQ-SPPYKKPHDLKKMWK 238
Query: 249 VGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPESCT 308
VGVLTAVIKHMSPD KIR+ VRQSKCLQDKMTAKES WL ++N+EE+L R+ P S
Sbjct: 239 VGVLTAVIKHMSPDFDKIRRHVRQSKCLQDKMTAKESLIWLGVLNREESLIRQ--PSSDN 296
Query: 309 VLS--------SSAGSGSLVINDCNEYDVEGAEDEPNFDVQECKPQNLISSSLGMERMRE 360
S I+ ++YDV+G ED P + +NL + ER R+
Sbjct: 297 GTSGITETPRGGHEDRNKDAISSDSDYDVDGLEDAPGSVSSKDDRRNLQPVAQEPERARD 356
Query: 361 RLPNQQPPYAIKGE 374
PNQ P K +
Sbjct: 357 DAPNQVVPDKEKTK 370
|
Length = 599 |
| >gnl|CDD|218302 pfam04873, EIN3, Ethylene insensitive 3 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 582 | |||
| PLN03109 | 599 | ETHYLENE-INSENSITIVE3-like3 protein; Provisional | 100.0 | |
| PF04873 | 354 | EIN3: Ethylene insensitive 3; InterPro: IPR006957 | 100.0 | |
| PF11001 | 126 | DUF2841: Protein of unknown function (DUF2841); In | 97.07 |
| >PLN03109 ETHYLENE-INSENSITIVE3-like3 protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-149 Score=1161.38 Aligned_cols=303 Identities=63% Similarity=1.096 Sum_probs=284.3
Q ss_pred CCcCCCCCCccccCCHHHHHHhhhhhhHHHHHHhhhccCCccch--hhhccccHHHHHHhhhhhhhhhHHHHHHHHHHHH
Q 007983 33 PEATVEDDYTDEEMDVDELERRMWKDKMRLKRLKEQSRGKEGID--MAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVC 110 (582)
Q Consensus 33 ~~~~~e~~~sdeei~~~eLe~rmWkDr~~lkrlke~~~~~~~~~--~~k~~~~~e~~rrKkMsRAQdgiLkyMlKmMEvC 110 (582)
.++++|+|+||||||+||||||||||||+||||||++|..+..+ ..|+++++||||||||+|||||||||||||||||
T Consensus 24 c~~~~~~~~sdeei~~~el~rrmwkd~~~l~rlke~~~~~~~~~~e~~~~~~~~~~arrkkm~raqdgilkymlk~me~c 103 (599)
T PLN03109 24 CDNLTENDVSDEEIEAEDLERRMWKDRIKLKRIKERQKKLQQAALEKSKPKKISDQARRKKMSRAQDGILKYMLKLMEVC 103 (599)
T ss_pred cCCCcccccccccCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46888999999999999999999999999999999988755443 6788999999999999999999999999999999
Q ss_pred hhccceeeeccCCCccccCCCchhHHHhhhhccccccchhhhhhhcccCCCCCCCCCCCCCCCCcchhhhcchhhhhhHH
Q 007983 111 KAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNSVPGKNEGINAIGPTPHTLQELQDTTLGSLL 190 (582)
Q Consensus 111 ~aqGFVYGiipekGkPvsGaSdnlR~WWKekV~FdrngPaAiaky~~~~~~~~~~~~~~~~~~~~h~L~~LqDtTLgsll 190 (582)
|||||||||||||||||||||||||+|||||||||||||||||||++||++++.++.... +++|+|+|||||||||||
T Consensus 104 ~a~gfvygiipekgkpvsg~sd~lr~wwk~~v~fd~~gp~ai~ky~~~~~~~~~~~~~~~--~~~~~l~~lqd~tLgsll 181 (599)
T PLN03109 104 KARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMGEAESSGN--NSQHSLQDLQDATLGSLL 181 (599)
T ss_pred hhcceeEEeccCCCCCCCCCchHHHHHHHHhcccccccHHHHHHhhhhcccccccccCCc--ccHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999888765553 899999999999999999
Q ss_pred HHhhhcCCCCccCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCchhhhhhhhhhhhhhhhccCcCHHHHHHHH
Q 007983 191 SALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKDQGAPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLV 270 (582)
Q Consensus 191 SaLmqhC~PPQrr~pLekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkkphdLkKawKv~vLtavIKHmsPd~~kir~lV 270 (582)
|||||||+|||||||||||+||||||||+|+||++||+|++++ |||||||||||||||+|||||||||||||+|||+||
T Consensus 182 salmqhC~Ppqr~~plekg~~PPWWPtg~E~WW~~~g~~~~~~-pPykkphdLkK~wKv~vl~avikhmsPd~~kir~~v 260 (599)
T PLN03109 182 SSLMQHCDPPQRKYPLEKGVPPPWWPSGNEDWWVKLGLPKGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDFDKIRRHV 260 (599)
T ss_pred HHHHhhcCChhhcCCCCCCCCCCCCCCCCcchhhhcCCCCCCC-CCCCCchhhhhHHHHHHHHHHHHHhCccHHHHHHHH
Confidence 9999999999999999999999999999999999999999865 999999999999999999999999999999999999
Q ss_pred hhhcccccchhHHHHHHHHHHHHHHHHHHHhhCCCCCC------CcCCCCCCCCccccCCCCccccCCCCCCCc
Q 007983 271 RQSKCLQDKMTAKESATWLAIINQEEALARELYPESCT------VLSSSAGSGSLVINDCNEYDVEGAEDEPNF 338 (582)
Q Consensus 271 rqSkcLQdKmTakEs~~W~~vl~~Ee~l~~~l~p~~~~------~~s~~~~~~~~~~~~~~eYDVeg~e~~~~~ 338 (582)
|||||||||||||||+||++||+|||+|++++..++.. |.++.++....++|+++||||||+||.+.+
T Consensus 261 r~Sk~lqdkmtakEs~~W~~vl~~Ee~~~~~~s~DNGtS~ITe~P~g~~~~rk~~~~SSdsdYDVDg~eD~~gS 334 (599)
T PLN03109 261 RQSKCLQDKMTAKESLIWLGVLNREESLIRQPSSDNGTSGITETPRGGHEDRNKDAISSDSDYDVDGLEDAPGS 334 (599)
T ss_pred HhchhHHhhhhHHHHHHHHHHHHHHHHHhcccCCCCCccccccCCCCccccCCCCCcCCCcccccccccCCCCC
Confidence 99999999999999999999999999999998877653 344555666778999999999999998865
|
|
| >PF04873 EIN3: Ethylene insensitive 3; InterPro: IPR006957 Ethylene insensitive 3 (EIN3) proteins are a family of plant DNA-binding proteins that regulate transcription in response to the gaseous plant hormone ethylene, and are essential for ethylene-mediated responses | Back alignment and domain information |
|---|
| >PF11001 DUF2841: Protein of unknown function (DUF2841); InterPro: IPR021264 This family of proteins with unknown function are all present in yeast | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 582 | ||||
| 1wij_A | 140 | Solution Structure Of The Dna-Binding Domain Of Eth | 7e-55 |
| >pdb|1WIJ|A Chain A, Solution Structure Of The Dna-Binding Domain Of Ethylene- Insensitive3-Like3 Length = 140 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 582 | |||
| 1wij_A | 140 | Ethylene-insensitive3-like 3 protein; DNA-binding | 4e-79 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-04 |
| >1wij_A Ethylene-insensitive3-like 3 protein; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.140.5.1 Length = 140 | Back alignment and structure |
|---|
Score = 245 bits (625), Expect = 4e-79
Identities = 100/140 (71%), Positives = 115/140 (82%), Gaps = 1/140 (0%)
Query: 167 GINAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQL 226
G + + LQ+LQD TLGSLLS+LMQHCDPPQR++PLEKG PPWWPTG EEWW +L
Sbjct: 1 GSSGSSGSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKL 60
Query: 227 GLPKDQGAPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESA 286
GLPK Q PPY+KPHDLKK WKVGVLTAVI HM PDIAKI++ VRQSKCLQDKMTAKESA
Sbjct: 61 GLPKSQS-PPYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESA 119
Query: 287 TWLAIINQEEALARELYPES 306
WLA++NQEE+L ++ P S
Sbjct: 120 IWLAVLNQEESLIQQSGPSS 139
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 582 | |||
| 1wij_A | 140 | Ethylene-insensitive3-like 3 protein; DNA-binding | 100.0 |
| >1wij_A Ethylene-insensitive3-like 3 protein; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.140.5.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-81 Score=565.99 Aligned_cols=138 Identities=72% Similarity=1.246 Sum_probs=126.5
Q ss_pred CCCCCCCcchhhhcchhhhhhHHHHhhhcCCCCccCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCchhhhhh
Q 007983 168 INAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKDQGAPPYKKPHDLKKAW 247 (582)
Q Consensus 168 ~~~~~~~~h~L~~LqDtTLgsllSaLmqhC~PPQrr~pLekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkkphdLkKaw 247 (582)
+++.++++|+|+||||||||||||||||||+|||||||||||+||||||||+|+||+++|+|++|+ |||||||||||||
T Consensus 2 ~~~~~~~~h~L~~Lqd~TLgsllsaLmqhC~PPQR~~Plekg~~PPWWPtG~E~WW~~lGl~~~~~-PPYkkPhdLkKaw 80 (140)
T 1wij_A 2 SSGSSGSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQS-PPYRKPHDLKKMW 80 (140)
T ss_dssp ------CCCCSTTSCHHHHHHHHHHHSSSSSSCTTSCCTTTCCHHHHCCCSCCHHHHHHTCCTTCC-CCCCCGGGCCHHH
T ss_pred CccccccHHHHHHHHHHhHHHHHHHHHhhCCCchhcCCCCCCCCcCCCCCCCchhHHhcCCCCCCC-CCCCCchhhhHHH
Confidence 456789999999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred hhhhhhhhhhccCcCHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHhhCCCC
Q 007983 248 KVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPES 306 (582)
Q Consensus 248 Kv~vLtavIKHmsPd~~kir~lVrqSkcLQdKmTakEs~~W~~vl~~Ee~l~~~l~p~~ 306 (582)
||+|||||||||||||+|||+|||||||||||||||||+||++||||||+++++++|++
T Consensus 81 KV~VLtAVIKHmsPd~~kir~lVrqSk~lqdKmTakEs~~W~~vl~~Ee~~~~~~~p~~ 139 (140)
T 1wij_A 81 KVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQSGPSS 139 (140)
T ss_dssp HHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTTCCSHHHHHHHHHHTTTTTCSCC-----
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhhhhHHhhhhHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999975
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 582 | ||||
| d1wija_ | 127 | a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like | 1e-83 |
| >d1wija_ a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 127 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: LEM/SAP HeH motif superfamily: DNA-binding domain of EIN3-like family: DNA-binding domain of EIN3-like domain: Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 254 bits (651), Expect = 1e-83
Identities = 97/126 (76%), Positives = 110/126 (87%), Gaps = 1/126 (0%)
Query: 176 HTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKDQGAP 235
LQ+LQD TLGSLLS+LMQHCDPPQR++PLEKG PPWWPTG EEWW +LGLPK Q P
Sbjct: 3 FVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQS-P 61
Query: 236 PYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQE 295
PY+KPHDLKK WKVGVLTAVI HM PDIAKI++ VRQSKCLQDKMTAKESA WLA++NQE
Sbjct: 62 PYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQE 121
Query: 296 EALARE 301
E+L ++
Sbjct: 122 ESLIQQ 127
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 582 | |||
| d1wija_ | 127 | Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 | 100.0 |
| >d1wija_ a.140.5.1 (A:) Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: LEM/SAP HeH motif superfamily: DNA-binding domain of EIN3-like family: DNA-binding domain of EIN3-like domain: Ethylene insensitive 3 (EIN3)-like protein 3, EIL3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.9e-79 Score=541.66 Aligned_cols=127 Identities=76% Similarity=1.352 Sum_probs=124.1
Q ss_pred CcchhhhcchhhhhhHHHHhhhcCCCCccCCCCCCCCCCCCCCCCCCccccccCCCCCCCCCCCCCCchhhhhhhhhhhh
Q 007983 174 TPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKDQGAPPYKKPHDLKKAWKVGVLT 253 (582)
Q Consensus 174 ~~h~L~~LqDtTLgsllSaLmqhC~PPQrr~pLekG~~PPWWPtG~E~WW~~~g~~~~~gpPPYkkphdLkKawKv~vLt 253 (582)
++|.|+||||||||||||||||||+|||||||||||+||||||||+|+||++||++++++ |||||||||||||||+|||
T Consensus 1 ~~~~L~~LqD~TLgsllsaLmqhC~PPQR~~Plekg~pPPWWPtG~E~WW~~lg~~~~~~-PPYkkPhdLkKawKv~vL~ 79 (127)
T d1wija_ 1 SQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQS-PPYRKPHDLKKMWKVGVLT 79 (127)
T ss_dssp CCCCSTTSCHHHHHHHHHHHSSSSSSCTTSCCTTTCCHHHHCCCSCCHHHHHHTCCTTCC-CCCCCGGGCCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCCCccccCCCCCCCCcCCCCCCCchhHHhcCCCCCCC-CCCCChHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999998 7999999999999999999
Q ss_pred hhhhccCcCHHHHHHHHhhhcccccchhHHHHHHHHHHHHHHHHHHHh
Q 007983 254 AVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARE 301 (582)
Q Consensus 254 avIKHmsPd~~kir~lVrqSkcLQdKmTakEs~~W~~vl~~Ee~l~~~ 301 (582)
||||||||||+|||+|||||||||||||||||+||++||+|||+|+++
T Consensus 80 aVIKHmsPd~~kir~lVr~sk~lqdkmTakEs~~W~~vl~~Ee~l~~~ 127 (127)
T d1wija_ 80 AVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQ 127 (127)
T ss_dssp HHHHHTGGGHHHHHHTTTTSSSSTTTCCSHHHHHHHHHHTTTTTCSCC
T ss_pred HHHHHhCCcHHHHHHHHHHhHHHHHHHhHHHHHHHHHHHHhHHHHhcC
Confidence 999999999999999999999999999999999999999999998763
|