Query 007985
Match_columns 582
No_of_seqs 158 out of 1478
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 15:20:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007985.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007985hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 1E-121 4E-126 1013.2 55.3 528 43-572 1-529 (547)
2 1we3_A CPN60(groel); chaperoni 100.0 6E-121 2E-125 1008.8 58.9 527 43-571 1-530 (543)
3 3rtk_A 60 kDa chaperonin 2; he 100.0 2E-122 6E-127 1017.3 46.6 526 43-572 1-527 (546)
4 1iok_A Chaperonin 60; chaperon 100.0 2E-121 8E-126 1011.3 47.0 528 43-572 2-531 (545)
5 3p9d_C T-complex protein 1 sub 100.0 4E-102 1E-106 864.0 39.1 499 37-569 4-589 (590)
6 3ko1_A Chaperonin; 9-fold symm 100.0 3E-99 1E-103 838.0 47.5 472 36-571 14-538 (553)
7 3ruv_A Chaperonin, CPN; double 100.0 5.9E-99 2E-103 835.3 47.8 470 37-571 5-524 (543)
8 3p9d_A T-complex protein 1 sub 100.0 1.4E-99 5E-104 842.4 38.7 471 43-572 15-554 (559)
9 3iyg_B T-complex protein 1 sub 100.0 5.6E-98 2E-102 823.0 51.0 460 44-568 2-513 (513)
10 1q3q_A Thermosome alpha subuni 100.0 3.7E-98 1E-102 829.8 48.8 464 43-570 14-529 (548)
11 1a6d_B Thermosome (beta subuni 100.0 3E-98 1E-102 830.4 47.7 471 44-578 13-535 (543)
12 3iyg_H T-complex protein 1 sub 100.0 1.9E-97 7E-102 818.5 50.2 462 44-566 3-514 (515)
13 1a6d_A Thermosome (alpha subun 100.0 8.1E-98 3E-102 826.6 46.2 461 44-569 14-525 (545)
14 3iyg_A T-complex protein 1 sub 100.0 6.3E-97 2E-101 817.4 48.6 464 45-567 3-529 (529)
15 3p9d_D T-complex protein 1 sub 100.0 2.7E-98 9E-103 827.5 36.6 463 44-566 11-528 (528)
16 3iyg_E T-complex protein 1 sub 100.0 4.2E-96 1E-100 809.0 50.4 458 44-565 2-514 (515)
17 3p9d_G T-complex protein 1 sub 100.0 2E-98 7E-103 831.5 31.9 468 43-572 15-533 (550)
18 3iyg_D T-complex protein 1 sub 100.0 3.8E-96 1E-100 809.3 49.2 458 45-566 4-518 (518)
19 3p9d_E T-complex protein 1 sub 100.0 1.3E-96 5E-101 818.9 41.9 476 35-568 26-560 (562)
20 3p9d_B T-complex protein 1 sub 100.0 1.3E-97 4E-102 823.1 32.8 465 44-573 9-525 (527)
21 3iyg_G T-complex protein 1 sub 100.0 5.2E-95 1.8E-99 799.7 49.2 457 46-566 3-514 (515)
22 3iyg_Q T-complex protein 1 sub 100.0 6.9E-95 2.3E-99 798.7 49.4 458 44-566 2-512 (512)
23 3iyg_Z T-complex protein 1 sub 100.0 1.5E-93 5E-98 787.9 47.1 455 46-565 4-516 (517)
24 3p9d_H T-complex protein 1 sub 100.0 1.6E-94 5.6E-99 803.0 31.2 466 44-573 17-555 (568)
25 3p9d_F T-complex protein 1 sub 100.0 4.6E-94 1.6E-98 797.2 31.4 461 44-568 9-539 (546)
26 3aq1_B Thermosome subunit; gro 100.0 2.2E-88 7.6E-93 744.4 40.4 429 80-572 1-482 (500)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 3E-48 1E-52 364.0 18.5 193 227-419 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 7.1E-47 2.4E-51 355.3 19.5 190 229-418 11-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 4.3E-36 1.5E-40 269.3 16.2 144 232-375 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.8 6E-21 2E-25 181.7 13.4 146 223-427 1-174 (178)
31 1ass_A Thermosome; chaperonin, 99.7 1.2E-17 4.2E-22 155.8 12.9 127 230-379 1-154 (159)
32 1gtz_A 3-dehydroquinate dehydr 28.7 2.6E+02 0.0089 25.0 8.7 86 254-341 3-103 (156)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.2e-121 Score=1013.15 Aligned_cols=528 Identities=51% Similarity=0.818 Sum_probs=513.3
Q ss_pred cchhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhc
Q 007985 43 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT 121 (582)
Q Consensus 43 ~~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~ 121 (582)
++|++.||.++|.+|++||..|+++|++||||+||||||++ +|+|+|||||+||+|+|+++||+||+||+|++++|++|
T Consensus 1 ~~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 80 (547)
T 1kp8_A 1 AAKDVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKA 80 (547)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhh
Confidence 36899999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHhhhcCCchhHHHH
Q 007985 122 NDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTM 201 (582)
Q Consensus 122 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 201 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.+++.|+++++|++++++|.++|++|++++++|+++
T Consensus 81 d~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~l 160 (547)
T 1kp8_A 81 NDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKL 160 (547)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHH
T ss_pred ccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred HHHHHHHhCCCCcEEEecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEeccCcCCHHHHHHHHHHHH
Q 007985 202 IADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTT 281 (582)
Q Consensus 202 i~~ai~~v~~~g~I~i~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~ 281 (582)
+++|+.+++++|.|++++|++++||+++++||+|+++|+||||+++|++|+++++||+||++|++|+++++++++++++.
T Consensus 161 iadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~ 240 (547)
T 1kp8_A 161 IAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVA 240 (547)
T ss_dssp HHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHH
T ss_pred HHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeE
Q 007985 282 QLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTAR 361 (582)
Q Consensus 282 ~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~ 361 (582)
+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+|+++++++|+|||++|||++++++.|+++++++.++||+|+
T Consensus 241 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~ 320 (547)
T 1kp8_A 241 KAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAK 320 (547)
T ss_dssp GGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEE
T ss_pred hcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHH
Q 007985 362 KVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKN 441 (582)
Q Consensus 362 ~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~ 441 (582)
.|+++++++++|++|++++.+++|++||+.+++.++++|+||+|+||+++|+|++|||+|||+|+.+++|+||+++||+|
T Consensus 321 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~ 400 (547)
T 1kp8_A 321 RVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALH 400 (547)
T ss_dssp EEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccCcchhHHHHHHhhHhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcCCCceeEE
Q 007985 442 ATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDSEWTTGYN 521 (582)
Q Consensus 442 ~~~~al~~gvVpGGGa~e~~l~~~L~~~~~~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~~~~~G~d 521 (582)
++++++++|+|||||++|++++.+|++++. .. .++++++++|++||+.||++||+|||+|+.+++.+|++.++++|||
T Consensus 401 ~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~-g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~~~~~G~d 478 (547)
T 1kp8_A 401 ATRAAVEEGVVAGGGVALIRVASKLADLRG-QN-ADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYN 478 (547)
T ss_dssp HHHHHHHHCEEETTTHHHHHHHHHTTTCCC-SS-HHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHSCTTEEEE
T ss_pred HHHHhccCCEEeCCcHHHHHHHHHHHHHhc-cC-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCEeEe
Confidence 999999999999999999999999998875 44 4568999999999999999999999999999999999887899999
Q ss_pred ccCCcccccccCCccccHHHHHHHHHHHHHHHHHHhchhhhhccCCCCCCC
Q 007985 522 AMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTP 572 (582)
Q Consensus 522 ~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~p~~~~~ 572 (582)
+.+|++.||++.|||||+.||+++|++|+|+|++||++|++|..+|++++|
T Consensus 479 ~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~~ 529 (547)
T 1kp8_A 479 AATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAA 529 (547)
T ss_dssp TTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC----
T ss_pred CCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCccCCC
Confidence 999999999999999999999999999999999999999999999886633
No 2
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=6e-121 Score=1008.77 Aligned_cols=527 Identities=55% Similarity=0.851 Sum_probs=512.7
Q ss_pred cchhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhc
Q 007985 43 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT 121 (582)
Q Consensus 43 ~~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~ 121 (582)
|+|++.||.++|.+|++||..|+++|++||||+||+|||++ +|+|+|||||+||+|+|+++||+||+||+|++++|++|
T Consensus 1 ~~k~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 80 (543)
T 1we3_A 1 MAKILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKT 80 (543)
T ss_dssp -CEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhh
Confidence 47899999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHhhhcCCchhHHHH
Q 007985 122 NDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTM 201 (582)
Q Consensus 122 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 201 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++++++|.++|++|++ +++++++
T Consensus 81 d~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~l 159 (543)
T 1we3_A 81 NDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKL 159 (543)
T ss_dssp HHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred heecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997 8999999
Q ss_pred HHHHHHHhCCCCcEEEecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEeccCcCCHHHHHHHHHHHH
Q 007985 202 IADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTT 281 (582)
Q Consensus 202 i~~ai~~v~~~g~I~i~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~ 281 (582)
+++|+.+++++|.|++++|++++||+++++||+|++||+||||+++|++|+++++||+||++|++|+++++++++++++.
T Consensus 160 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~ 239 (543)
T 1we3_A 160 IADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVA 239 (543)
T ss_dssp HHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeE
Q 007985 282 QLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTAR 361 (582)
Q Consensus 282 ~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~ 361 (582)
+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+|+++++++|+|||++|||++++++.|+++++++.++||+|+
T Consensus 240 ~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~ 319 (543)
T 1we3_A 240 QTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAE 319 (543)
T ss_dssp TTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEE
T ss_pred hcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred EEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHH
Q 007985 362 KVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKN 441 (582)
Q Consensus 362 ~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~ 441 (582)
.|+++++++++|++|++++.+.+|++||+.+++.++++|++++|+||+++|+|++|||+|||+|+.+++|+||+++||+|
T Consensus 320 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~ 399 (543)
T 1we3_A 320 RVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALN 399 (543)
T ss_dssp EEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccCcchhHHHHHHhhHhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhc--CCCcee
Q 007985 442 ATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD--SEWTTG 519 (582)
Q Consensus 442 ~~~~al~~gvVpGGGa~e~~l~~~L~~~~~~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~--~~~~~G 519 (582)
++++++++|+|||||++|++++.+|++++.+..+ ++++++++|++||+.||++||+|||+|+.+++.+|++ .++++|
T Consensus 400 ~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g-~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G 478 (543)
T 1we3_A 400 ATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEG-DEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYG 478 (543)
T ss_dssp HHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCH-HHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEE
T ss_pred HHHHHhccCcCCCccHHHHHHHHHHHHHhhccCc-hHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEE
Confidence 9999999999999999999999999999876554 4679999999999999999999999999999999998 567899
Q ss_pred EEccCCcccccccCCccccHHHHHHHHHHHHHHHHHHhchhhhhccCCCCCC
Q 007985 520 YNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKT 571 (582)
Q Consensus 520 ~d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~p~~~~ 571 (582)
||+.+|++.||++.|||||+.||+++|++|+|+|++||++|++|..+|++++
T Consensus 479 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~ 530 (543)
T 1we3_A 479 FNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKKE 530 (543)
T ss_dssp EETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC--
T ss_pred EeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCC
Confidence 9999999999999999999999999999999999999999999999987654
No 3
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.9e-122 Score=1017.31 Aligned_cols=526 Identities=53% Similarity=0.835 Sum_probs=435.2
Q ss_pred cchhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhc
Q 007985 43 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT 121 (582)
Q Consensus 43 ~~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~ 121 (582)
|+|++.||.++|..|+.|+..|+++|++||||+||||||++ +|+|+|||||+||+|+|+++||++|+||+|++++|++|
T Consensus 1 ~~k~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~q 80 (546)
T 3rtk_A 1 MAKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKT 80 (546)
T ss_dssp ------------------------------------------------------------CCCHHHHHHHHHHHHHHTSC
T ss_pred CCceeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhh
Confidence 68999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHhhhcCCchhHHHH
Q 007985 122 NDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTM 201 (582)
Q Consensus 122 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 201 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++++++|.++|++|++ +++++++
T Consensus 81 d~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~l 159 (546)
T 3rtk_A 81 DDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDL 159 (546)
T ss_dssp C-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHH
T ss_pred hhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997 8999999
Q ss_pred HHHHHHHhCCCCcEEEecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEeccCcCCHHHHHHHHHHHH
Q 007985 202 IADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTT 281 (582)
Q Consensus 202 i~~ai~~v~~~g~I~i~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~ 281 (582)
+++|+.+++.+|+|+++.+.+..+..++++||+|+++|+||||++++++|+++++||+|+++|++|+++++++++++++.
T Consensus 160 iadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~ 239 (546)
T 3rtk_A 160 IAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVI 239 (546)
T ss_dssp HHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHH
T ss_pred HHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHH
Confidence 99999999999999998887765444999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeE
Q 007985 282 QLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTAR 361 (582)
Q Consensus 282 ~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~ 361 (582)
+.|+||||++++|+++|+++|+.|+++|++++++||+|+|++.++++|+|||++|||+++++++|+++++++.++||+|+
T Consensus 240 ~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~ 319 (546)
T 3rtk_A 240 GAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKAR 319 (546)
T ss_dssp TTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEE
T ss_pred hcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHH
Q 007985 362 KVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKN 441 (582)
Q Consensus 362 ~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~ 441 (582)
+|+++++++++|++|++++.+++|++||+.++++++++|++|+|+||+++|+|++|||+|||+|+.+++|+||+++||+|
T Consensus 320 ~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~ 399 (546)
T 3rtk_A 320 KVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVR 399 (546)
T ss_dssp EEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHH
T ss_pred EEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccCcchhHHHHHHhhHhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcCCCceeEE
Q 007985 442 ATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDSEWTTGYN 521 (582)
Q Consensus 442 ~~~~al~~gvVpGGGa~e~~l~~~L~~~~~~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~~~~~G~d 521 (582)
++|+++++|+|||||++|++++.+|++++ .++ ++++++++|++||+.||++||+|||+|+.+++.+|++....+|||
T Consensus 400 a~r~av~~giVpGGGa~e~~~s~~L~~~~--~~g-~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~G~d 476 (546)
T 3rtk_A 400 NAKAAVEEGIVAGGGVTLLQAAPTLDELK--LEG-DEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLN 476 (546)
T ss_dssp HHHHHHHHCEEETTTHHHHTTGGGSTTSC--CCT-THHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSCTTEECC
T ss_pred HHHHHHhCCcccCCcHHHHHHHHHHHHhc--ccc-HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCEeEc
Confidence 99999999999999999999999999886 444 467999999999999999999999999999999999876679999
Q ss_pred ccCCcccccccCCccccHHHHHHHHHHHHHHHHHHhchhhhhccCCCCCCC
Q 007985 522 AMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTP 572 (582)
Q Consensus 522 ~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~p~~~~~ 572 (582)
+.+|++.||++.|||||+.||+++|++|+|+|++|||+|++|..+|+++++
T Consensus 477 ~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~~~~ 527 (546)
T 3rtk_A 477 AQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKEKA 527 (546)
T ss_dssp SSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC------------
T ss_pred CCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999999999999999999999999999887643
No 4
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=2.4e-121 Score=1011.34 Aligned_cols=528 Identities=53% Similarity=0.862 Sum_probs=470.3
Q ss_pred cchhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhc
Q 007985 43 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT 121 (582)
Q Consensus 43 ~~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~ 121 (582)
|+|++.||.++|.+|++||..|+++|++||||+||||||++ +|+|+|||||+||+|+|+++||+||+||+|++++|++|
T Consensus 2 ~~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~q 81 (545)
T 1iok_A 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRT 81 (545)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHG
T ss_pred CchhhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhh
Confidence 68999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccCCHHHHHHHHhhhcCCchhHHHH
Q 007985 122 NDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGRDDIKAVATISAGNDDLIGTM 201 (582)
Q Consensus 122 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~l 201 (582)
|+++||||||+||||++||+++.+++.+|+||..|++||++|++.+++.|+++++|++++++|.++|++|++++++|+++
T Consensus 82 d~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~l 161 (545)
T 1iok_A 82 NDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQ 161 (545)
T ss_dssp GGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHH
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998899999999999889999999
Q ss_pred HHHHHHHhCCCCcEEEecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEeccCcCCHHHHHHHHHHHH
Q 007985 202 IADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTT 281 (582)
Q Consensus 202 i~~ai~~v~~~g~I~i~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~ 281 (582)
+++|+.+++++|.|++++|++++||+++++||+|+++|+||||+++|++|+.+++||+||++|++|+++++++++++++.
T Consensus 162 i~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~ 241 (545)
T 1iok_A 162 IAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVI 241 (545)
T ss_dssp HHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC---------
T ss_pred HHHHHHHhccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeE
Q 007985 282 QLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTAR 361 (582)
Q Consensus 282 ~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~ 361 (582)
+.|+||||++++|+++|+++|+.|+++|.++|+|||+|+|+++++++|+|||++|||+++++++|++++++++++||+|+
T Consensus 242 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~ 321 (545)
T 1iok_A 242 QSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAK 321 (545)
T ss_dssp --CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC---------------CTTSEEEE
T ss_pred hcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecceEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHH
Q 007985 362 KVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKN 441 (582)
Q Consensus 362 ~v~i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~ 441 (582)
+|++++++|++|++|++++.+++|++|++.+++.++++|++|+|+||+++|+|++|||+|||+|+.+++|+||+++||+|
T Consensus 322 ~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~ 401 (545)
T 1iok_A 322 KVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALN 401 (545)
T ss_dssp EEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHH
T ss_pred EEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCcccCcchhHHHHHHhhHhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC-CCceeE
Q 007985 442 ATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS-EWTTGY 520 (582)
Q Consensus 442 ~~~~al~~gvVpGGGa~e~~l~~~L~~~~~~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~-~~~~G~ 520 (582)
++++++++|+|||||++|++++.+|++++. .. .++++++++|++||+.||++||+|||+|+.+++.+|++. ++++||
T Consensus 402 ~~r~av~~giVpGGGa~e~~~s~~L~~~~~-~~-g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~ 479 (545)
T 1iok_A 402 ATRAAVQEGIVVGGGVALVQGAKVLEGLSG-AN-SDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGF 479 (545)
T ss_dssp HHHHHHHHCEEETTTHHHHHHGGGGGSCCC-SS-HHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEE
T ss_pred HHHHHhhcCCCCCchHHHHHHHHHHHHHhc-cC-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeE
Confidence 999999999999999999999999998875 44 456799999999999999999999999999999999987 778999
Q ss_pred EccCCcccccccCCccccHHHHHHHHHHHHHHHHHHhchhhhhccCCCCCCC
Q 007985 521 NAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTP 572 (582)
Q Consensus 521 d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~p~~~~~ 572 (582)
|+.+|++.||++.|||||+.||+++|++|+|+|++||++|++|..+|+++++
T Consensus 480 d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~~~~ 531 (545)
T 1iok_A 480 NAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEPKAP 531 (545)
T ss_dssp ETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC-----
T ss_pred eCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCccCCC
Confidence 9999999999999999999999999999999999999999999999876543
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=3.5e-102 Score=863.99 Aligned_cols=499 Identities=20% Similarity=0.295 Sum_probs=426.9
Q ss_pred cceecccchhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHH
Q 007985 37 RFAVRASAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIR 115 (582)
Q Consensus 37 ~~~~~~~~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~ 115 (582)
|+.+-....+..+|.++|..|+.||..|+++|++||||+||||||++ +|+|+|||||+||+|+|+++||+ |+|++
T Consensus 4 ~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~----Akll~ 79 (590)
T 3p9d_C 4 PVVFMNASQERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPA----AKSML 79 (590)
T ss_dssp --CCSCTTCCBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHH----HHTHH
T ss_pred CeEeecCCcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHH----HHHHH
Confidence 44333335678899999999999999999999999999999999999 99999999999999999999999 99999
Q ss_pred HHHhhcccccCCCcchHHHHHHHHHHHHHhh-hhCCCChHHHHHHHHHHHHHHHHHHhhcccccCC--HHHHHHHHhhhc
Q 007985 116 EVASKTNDSAGDGTTTASVLAREIIKLGLLS-VTSGANPVSLKRGIDKTVHGLVEELEKRARPIEG--RDDIKAVATISA 192 (582)
Q Consensus 116 e~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~l-i~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~~~l~~va~ts~ 192 (582)
++|++||+++||||||+||||++||+++.++ +.+|+||+.|++||++|++.++++|+++++|++. ++.|.++|+|++
T Consensus 80 e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tsl 159 (590)
T 3p9d_C 80 ELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASI 159 (590)
T ss_dssp HHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTS
T ss_pred HHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 9999999999999999999999999999999873 688999999986
Q ss_pred C------CchhHHHHHHHHHHHhCCCCc------------------EEEecCCCccccceeeeeeEEeeecccCCCccCc
Q 007985 193 G------NDDLIGTMIADAIDKVGPDGV------------------LSIESSSSFETTVEVEEGMEIDRGYISPQFVTNP 248 (582)
Q Consensus 193 ~------~~~~l~~li~~ai~~v~~~g~------------------I~i~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~ 248 (582)
+ ++++|++|+++|+.++++++. |....|+++.|| ++++||+|++++.+|
T Consensus 160 sSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds-~lv~Gmvfdk~~~~~------ 232 (590)
T 3p9d_C 160 GTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDS-RVLKGVLLNKDVVHP------ 232 (590)
T ss_dssp TTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGC-BCCSSEEECCCCSCT------
T ss_pred hcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccc-eeeeEEEEecccCCC------
Confidence 4 368999999999999987642 233579999999 999999999998776
Q ss_pred ccCceeecCeeEEEeccC-------------cCCHHHHHHHH-----------HHHHhcCCCEEEEecCccHHHHHHHHH
Q 007985 249 EKLIVEFENARVLVTDQK-------------ISAIKDIIPLL-----------EKTTQLRAPLLIIAEDVTGEALATLVV 304 (582)
Q Consensus 249 ~~~~~~~~n~~Ill~d~~-------------i~~~~~i~~~l-----------e~i~~~~~~lvii~~~i~~~al~~L~~ 304 (582)
+|+++++||||+++|++ +++++++.+++ +++.+.|++|||+.++|+++|+++|++
T Consensus 233 -~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k 311 (590)
T 3p9d_C 233 -KMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLK 311 (590)
T ss_dssp -TSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHH
T ss_pred -CCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHh
Confidence 47889999999999995 34566665544 688899999999999999999999998
Q ss_pred hhhcCCceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcce-eEEEE---EecceEEEEeCCCChH
Q 007985 305 NKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGT-ARKVT---IRKDSTTIIADAASKD 380 (582)
Q Consensus 305 n~~~g~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~-~~~v~---i~~~~~~~~~~~~~~~ 380 (582)
|++ ++|+++++.+|+|||++|||++++ +++++++++||+ |+.|+ +++++|++|++|+++.
T Consensus 312 ~~I-----------~av~~~~k~~le~ia~~TGa~iis-----~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~ 375 (590)
T 3p9d_C 312 GGC-----------SVLRRVKKSDNNRIARVTGATIVN-----RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPG 375 (590)
T ss_dssp TTC-----------CCCCCCCHHHHHHHHHHHTCCCCS-----CSTTCCTTSCBCCCSEEECCEETTEECEEECC-----
T ss_pred ccc-----------eeeccCCHHHHHHHHHHhCCceee-----cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCcc
Confidence 753 367899999999999999999999 699999999999 99997 5789999999999888
Q ss_pred H--------------------------HHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHh
Q 007985 381 E--------------------------IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKL 434 (582)
Q Consensus 381 ~--------------------------i~~ri~~l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~ 434 (582)
. +++|+++|+.+++.++++|+++ +++|+|++|||+|||+|+.+++|+||
T Consensus 376 ~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr 450 (590)
T 3p9d_C 376 SGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDILNEIDR 450 (590)
T ss_dssp ---------------------------------------------------------CCCSCCCEEEECSSTTTHHHHHH
T ss_pred ccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHHHHHHH
Confidence 7 9999999999999999999966 57899999999999999999999999
Q ss_pred hHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhc
Q 007985 435 RIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD 513 (582)
Q Consensus 435 ~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~ 513 (582)
+++||++++|+++++| +|||||++|++++.+|++++.+..+. +++|+++|++||+.||++||+|||+|+.+++.+|++
T Consensus 451 ~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 529 (590)
T 3p9d_C 451 NLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGI-QQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRA 529 (590)
T ss_dssp HHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCST-THHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999999999999995 99999999999999999988766655 579999999999999999999999999999999987
Q ss_pred C----CCceeEEccCCcccccccCCccccHHHHHHHHHHHHHHHHHHhchhhhhccCCCC
Q 007985 514 S----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKP 569 (582)
Q Consensus 514 ~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~p~~ 569 (582)
. ++++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..+|++
T Consensus 530 ~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 589 (590)
T 3p9d_C 530 KHAQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVRKQ 589 (590)
T ss_dssp HHTTSCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC--
T ss_pred HHhcCCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3 5789999999999999999999999999999999999999999999999988764
No 6
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=3e-99 Score=838.00 Aligned_cols=472 Identities=22% Similarity=0.344 Sum_probs=423.1
Q ss_pred ccceecccchhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHH
Q 007985 36 RRFAVRASAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALI 114 (582)
Q Consensus 36 ~~~~~~~~~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll 114 (582)
+|+.+-..+.+..||.++|..|+.||..|+++|++||||+||+|||++ +|+|+|||||+||||+|+++||. |+|+
T Consensus 14 ~~~~~l~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll 89 (553)
T 3ko1_A 14 IPVIILKEGSSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPA----AKLL 89 (553)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHH----HHHH
T ss_pred CeEEEEecCcccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChh----HHHH
Confidence 455433336789999999999999999999999999999999999999 99999999999999999999998 9999
Q ss_pred HHHHhhcccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccC--CHHHHHHHHhhhc
Q 007985 115 REVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVATISA 192 (582)
Q Consensus 115 ~e~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~ 192 (582)
+++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+
T Consensus 90 ~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl 169 (553)
T 3ko1_A 90 VQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSL 169 (553)
T ss_dssp HHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHH
T ss_pred HHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999997 7899999999998
Q ss_pred CC------chhHHHHHHHHHHHhCCC--Cc-------EEEe--cCCCccccceeeeeeEEeeecccCCCccCcccCceee
Q 007985 193 GN------DDLIGTMIADAIDKVGPD--GV-------LSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEF 255 (582)
Q Consensus 193 ~~------~~~l~~li~~ai~~v~~~--g~-------I~i~--~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~ 255 (582)
++ +++|++|+++|+.+++++ |. |+++ .|+++.|| ++++||+|+++|.|||| ++++
T Consensus 170 ~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~i 241 (553)
T 3ko1_A 170 SSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDT-QLVYGIVVDKEVVHPGM-------PKRL 241 (553)
T ss_dssp TTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGC-EEESEEEECSCBSCTTS-------CSCC
T ss_pred hHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccc-eeeEEEEecccccCCCC-------cccc
Confidence 75 789999999999999875 65 7764 78899998 99999999999999984 6689
Q ss_pred cCeeEEEeccC-------------cCCHHH-----------HHHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCc
Q 007985 256 ENARVLVTDQK-------------ISAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGIL 311 (582)
Q Consensus 256 ~n~~Ill~d~~-------------i~~~~~-----------i~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~ 311 (582)
+||||+++|++ |+++++ +.++++++.+.|+||||++++|+++++++|.+++ +
T Consensus 242 en~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~g---I- 317 (553)
T 3ko1_A 242 ENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKG---V- 317 (553)
T ss_dssp BSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHT---C-
T ss_pred ccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcc---h-
Confidence 99999999994 567776 4577899999999999999999999999998653 3
Q ss_pred eEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEEe---cceEEEEeCCCChHHHHHHHHH
Q 007985 312 NVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKDEIQARIAQ 388 (582)
Q Consensus 312 ~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~ri~~ 388 (582)
++|+ ++++++|+|||++|||++++ +++++++++||+|+.|++. +++|+||++|+++
T Consensus 318 --~~v~-----~v~k~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~--------- 376 (553)
T 3ko1_A 318 --LAVR-----RAKKSDLEKLARATGGRVVS-----NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNP--------- 376 (553)
T ss_dssp --EEEC-----CCCHHHHHHHHTTTTCCEES-----CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSS---------
T ss_pred --hhhh-----hhhhhhHHHHHHhhCCeeec-----ccccCChhhcchHHHHHHhhcCcceEEEeccCCCC---------
Confidence 4553 66899999999999999999 7999999999999999964 8999999999775
Q ss_pred HHHHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhH
Q 007985 389 LKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVP 467 (582)
Q Consensus 389 l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~ 467 (582)
..|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++.+|+
T Consensus 377 --------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~ 430 (553)
T 3ko1_A 377 --------------------------KSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLR 430 (553)
T ss_dssp --------------------------SCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHH
T ss_pred --------------------------ceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHH
Confidence 479999999999999999999999999999999999 99999999999999999
Q ss_pred hhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcCC-----CceeEEccCCcccccccCCccccHHHH
Q 007985 468 AIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDSE-----WTTGYNAMTDKYENMLQAGVIDPAKVT 542 (582)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~~-----~~~G~d~~~g~i~d~~~~gI~dp~~vk 542 (582)
+++.++.+. +++++++|++||+.||++||+|||+|+.+++.+|+..+ +++|||+.+|++.||++.|||||+.||
T Consensus 431 ~~~~~~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk 509 (553)
T 3ko1_A 431 KYAPQVGGK-EQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVK 509 (553)
T ss_dssp HHHHHHCSH-HHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHH
T ss_pred HhccccCCh-hHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhh
Confidence 998766665 57999999999999999999999999999999998752 679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhchhhhhccCCCCCC
Q 007985 543 RCALQNAASVAGMVLTTQAIVVEKPKPKT 571 (582)
Q Consensus 543 ~~~l~~A~e~a~~lL~id~iI~~~p~~~~ 571 (582)
+++|++|+|+|++|||||++|..+|++++
T Consensus 510 ~~al~~A~e~a~~iL~iD~ii~~~~~~~~ 538 (553)
T 3ko1_A 510 MNAIKAATEAATLVLRIDDVVSAGKKSGG 538 (553)
T ss_dssp HHHHHHHHHHHHHHHHEEEECCC------
T ss_pred hhhhhhcchhheEEEehHHHHHhhhhccC
Confidence 99999999999999999999998887654
No 7
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=5.9e-99 Score=835.34 Aligned_cols=470 Identities=25% Similarity=0.365 Sum_probs=430.3
Q ss_pred cceecccchhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHH
Q 007985 37 RFAVRASAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIR 115 (582)
Q Consensus 37 ~~~~~~~~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~ 115 (582)
|+.++. +.+..+|.++|..|+.||..|+++|++||||+||||||++ +|+|+|||||+||||+|+++||. |+|++
T Consensus 5 p~~l~~-~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~ 79 (543)
T 3ruv_A 5 PGVLPE-NMKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPA----AKMLI 79 (543)
T ss_dssp CCSSCS-SEEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHH----HHHHH
T ss_pred CeeecC-CcchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHH
Confidence 443444 5678899999999999999999999999999999999999 99999999999999999999998 99999
Q ss_pred HHHhhcccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccC--CHHHHHHHHhhhcC
Q 007985 116 EVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVATISAG 193 (582)
Q Consensus 116 e~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~ 193 (582)
++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||++
T Consensus 80 e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~ 159 (543)
T 3ruv_A 80 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSIT 159 (543)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999997 78999999999986
Q ss_pred C------chhHHHHHHHHHHHhCCC-Cc-----EEEe--cCCCccccceeeeeeEEeeecccCCCccCcccCceeecCee
Q 007985 194 N------DDLIGTMIADAIDKVGPD-GV-----LSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENAR 259 (582)
Q Consensus 194 ~------~~~l~~li~~ai~~v~~~-g~-----I~i~--~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~ 259 (582)
+ +++|++++++|+.+++++ |. |+++ .|+++.|| ++++||+|+++|.|||| +++++|||
T Consensus 160 sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~~~ds-~lv~G~v~dk~~~~~~m-------~~~~~n~k 231 (543)
T 3ruv_A 160 GKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGASIDDT-ELIKGVLVDKERVSAQM-------PKKVTDAK 231 (543)
T ss_dssp HTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSCGGGC-EEESSEEESCCCSCTTS-------CSEEEEEE
T ss_pred ccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCCcccc-eeecceEEeccccCccc-------cccccCcE
Confidence 4 799999999999999987 65 6664 78899998 99999999999999985 67899999
Q ss_pred EEEeccC-------------cCCHHH-----------HHHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEE
Q 007985 260 VLVTDQK-------------ISAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAA 315 (582)
Q Consensus 260 Ill~d~~-------------i~~~~~-----------i~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~a 315 (582)
|+++|++ |+++++ +.++++++.+.|+||||++++|+++|+++|+++ |+ ++
T Consensus 232 Ill~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~---gI---~~ 305 (543)
T 3ruv_A 232 IALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKE---GI---VA 305 (543)
T ss_dssp EEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHT---TC---EE
T ss_pred EEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHc---Cc---EE
Confidence 9999995 456655 567789999999999999999999999999864 33 45
Q ss_pred eeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHH
Q 007985 316 IKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKDEIQARIAQLKKE 392 (582)
Q Consensus 316 Vk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~ri~~l~~~ 392 (582)
|+ ++++.+|+|||++|||++++ +++++++++||+|+.|++. +++|+||++|+++
T Consensus 306 v~-----~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------- 362 (543)
T 3ruv_A 306 AR-----RVKKSDMEKLAKATGANVIA-----AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHP------------- 362 (543)
T ss_dssp EC-----SCCHHHHHHHHHHHCCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSC-------------
T ss_pred Ee-----eCCHHHHHHHHHHhCCceec-----ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCC-------------
Confidence 54 66899999999999999999 7999999999999999864 8899999999775
Q ss_pred HhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhh
Q 007985 393 LAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKD 471 (582)
Q Consensus 393 l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~ 471 (582)
..|||+|||+|+.+++|+||+++||+|++++++++| +|||||++|++++.+|++++.
T Consensus 363 ----------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~ 420 (543)
T 3ruv_A 363 ----------------------KAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAE 420 (543)
T ss_dssp ----------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHH
T ss_pred ----------------------ceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhh
Confidence 469999999999999999999999999999999999 999999999999999999987
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC-----CCceeEEccCCcccccccCCccccHHHHHHHH
Q 007985 472 KLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS-----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCAL 546 (582)
Q Consensus 472 ~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~-----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l 546 (582)
++.+. +++++++|++||+.||++||+|||+|+.+++.+|+.. ++++|||+.+|++.||++.|||||+.||+++|
T Consensus 421 ~~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al 499 (543)
T 3ruv_A 421 GISGR-EQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAI 499 (543)
T ss_dssp TCCTT-HHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHH
T ss_pred cCChH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHH
Confidence 76665 5699999999999999999999999999999999763 36899999999999999999999999999999
Q ss_pred HHHHHHHHHHhchhhhhccCCCCCC
Q 007985 547 QNAASVAGMVLTTQAIVVEKPKPKT 571 (582)
Q Consensus 547 ~~A~e~a~~lL~id~iI~~~p~~~~ 571 (582)
++|+|+|++|||||++|..+|+..+
T Consensus 500 ~~A~~~a~~iL~id~ii~~~~~~~~ 524 (543)
T 3ruv_A 500 QSAAESTEMLLRIDDVIAAEKLRGA 524 (543)
T ss_dssp HHHHHHHHHHHTCCEEEEEC-----
T ss_pred HHHHHHHHHHHhHHhheecCccCCC
Confidence 9999999999999999999887654
No 8
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.4e-99 Score=842.38 Aligned_cols=471 Identities=19% Similarity=0.307 Sum_probs=434.2
Q ss_pred cchhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhc
Q 007985 43 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT 121 (582)
Q Consensus 43 ~~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~ 121 (582)
.++++.||.++|..|+.||..|+++|++||||+||+|||++ +|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 15 ~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 90 (559)
T 3p9d_A 15 LGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPA----GKILVELAQQQ 90 (559)
T ss_dssp SSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHH----HHHHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHH----HHHHHHHHHHH
Confidence 37889999999999999999999999999999999999999 99999999999999999999999 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhh-cccccCC--HHHHHHHHhhhcCC----
Q 007985 122 NDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEK-RARPIEG--RDDIKAVATISAGN---- 194 (582)
Q Consensus 122 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~-~s~~v~~--~~~l~~va~ts~~~---- 194 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|++ +++|++. ++.|.++|+||+++
T Consensus 91 d~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~ 170 (559)
T 3p9d_A 91 DREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIG 170 (559)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGG
T ss_pred HHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCccc
Confidence 9999999999999999999999999999999999999999999999999999 9999974 78899999999875
Q ss_pred --chhHHHHHHHHHHHhCC-----CCc-----EEE--ecCCCccccceeeeeeEEeeecccCCCccCcccCceeec--Ce
Q 007985 195 --DDLIGTMIADAIDKVGP-----DGV-----LSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFE--NA 258 (582)
Q Consensus 195 --~~~l~~li~~ai~~v~~-----~g~-----I~i--~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~--n~ 258 (582)
+++|++|+++|+.++++ +|. |++ ..|++++|| ++++||+|+++|.|||| +++++ ||
T Consensus 171 ~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds-~lv~G~v~dk~~~~~~m-------~~~ie~~n~ 242 (559)
T 3p9d_A 171 ADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATES-LLVPGYALNCTVASQAM-------PKRIAGGNV 242 (559)
T ss_dssp TTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCC-BCCSEECCCCCCSSTTS-------CSEECSSSB
T ss_pred chhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccce-eEeccEEEeecccCCCc-------ceeeccCCc
Confidence 79999999999999984 243 333 459999998 99999999999999984 56788 99
Q ss_pred eEEEeccCc-------------CCHHH-----------HHHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEE
Q 007985 259 RVLVTDQKI-------------SAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVA 314 (582)
Q Consensus 259 ~Ill~d~~i-------------~~~~~-----------i~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~ 314 (582)
||+++|++| +++++ +.++++++.+.|+||||++++|+++|+++|+.|++ +
T Consensus 243 kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I------~ 316 (559)
T 3p9d_A 243 KIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKI------M 316 (559)
T ss_dssp CEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTC------E
T ss_pred eEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCC------c
Confidence 999999986 34443 67889999999999999999999999999999864 5
Q ss_pred EeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcc-cCCCcCCcceeEEEE---EecceEEEEeCCCChHHHHHHHHHHH
Q 007985 315 AIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLI-ENTSVEQLGTARKVT---IRKDSTTIIADAASKDEIQARIAQLK 390 (582)
Q Consensus 315 aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~-~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~ri~~l~ 390 (582)
+| +++++.+|+|||++|||+++++..++.. +++++++||+|+.|+ +++++|++|.+|++
T Consensus 317 av-----~~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------ 379 (559)
T 3p9d_A 317 GV-----RRCKKEDLRRIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK------------ 379 (559)
T ss_dssp EE-----SSCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS------------
T ss_pred eE-----ccCCHHHHHHHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC------------
Confidence 44 5789999999999999999997666655 889999999999998 57999999999876
Q ss_pred HHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhh
Q 007985 391 KELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAI 469 (582)
Q Consensus 391 ~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~ 469 (582)
+++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++.+|+++
T Consensus 380 -----------------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~ 436 (559)
T 3p9d_A 380 -----------------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNF 436 (559)
T ss_dssp -----------------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHH
T ss_pred -----------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHH
Confidence 3689999999999999999999999999999999999 9999999999999999999
Q ss_pred hhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC----CC------------ceeEEccCCcccccccC
Q 007985 470 KDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EW------------TTGYNAMTDKYENMLQA 533 (582)
Q Consensus 470 ~~~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~----~~------------~~G~d~~~g~i~d~~~~ 533 (582)
+.+..+. +++++++|++||+.||++||+|||+|+.+++.+|+.. ++ ++|||+.+|++.||++.
T Consensus 437 ~~~~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~ 515 (559)
T 3p9d_A 437 ATTVGSR-EQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHA 515 (559)
T ss_dssp HTTSCTT-HHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTS
T ss_pred hcccChH-HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhc
Confidence 8776665 5799999999999999999999999999999999873 23 79999999999999999
Q ss_pred CccccHHHHHHHHHHHHHHHHHHhchhhhhccCCCCCCC
Q 007985 534 GVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTP 572 (582)
Q Consensus 534 gI~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~p~~~~~ 572 (582)
|||||+.||+++|++|+|+|++|||||++|...|++++.
T Consensus 516 gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~~~~ 554 (559)
T 3p9d_A 516 GVLEPTISKVKSLKSALEACVAILRIDTMITVDPEPPKE 554 (559)
T ss_dssp SCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCCCCC
T ss_pred cCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCccccc
Confidence 999999999999999999999999999999998877643
No 9
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=5.6e-98 Score=822.96 Aligned_cols=460 Identities=21% Similarity=0.312 Sum_probs=427.5
Q ss_pred chhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-C--CCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhh
Q 007985 44 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-F--GSPKVVNDGVTIARAIELADPMENAGAALIREVASK 120 (582)
Q Consensus 44 ~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~--g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~ 120 (582)
+.+..||.++|.+|+.||..|+++|++||||+||||||++ + |+|+|||||+||||+|+++||. |+|++++|++
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~----Akll~e~a~~ 77 (513)
T 3iyg_B 2 GADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPA----AKVLVDMSRV 77 (513)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHH----HHHHHHHHHH
Confidence 4578899999999999999999999999999999999999 8 9999999999999999999997 9999999999
Q ss_pred cccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccC-----CHHHHHHHHhhhcC--
Q 007985 121 TNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE-----GRDDIKAVATISAG-- 193 (582)
Q Consensus 121 ~d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-----~~~~l~~va~ts~~-- 193 (582)
||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+|+++
T Consensus 78 qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK 157 (513)
T 3iyg_B 78 QDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSK 157 (513)
T ss_pred hhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999997 57889999998875
Q ss_pred ----CchhHHHHHHHHHHHhCCC---CcEEEe--cCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEec
Q 007985 194 ----NDDLIGTMIADAIDKVGPD---GVLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTD 264 (582)
Q Consensus 194 ----~~~~l~~li~~ai~~v~~~---g~I~i~--~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d 264 (582)
++++|++|+++|+.+++++ +.|+++ .|+++.|| ++++||+|+++|.+| |+++++||||+++|
T Consensus 158 ~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~~~ds-~lv~G~v~dk~~~~~--------m~~~~en~kIll~~ 228 (513)
T 3iyg_B 158 LLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGSLADS-YLDEGFLLDKKIGVN--------QPKRIENAKILIAN 228 (513)
T ss_pred ccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCCccce-eEEeeEEEeccccCC--------CceeecCceEEEEc
Confidence 4689999999999999987 777774 69999999 999999999999886 67889999999999
Q ss_pred cC--------------cCCHHHHH-----------HHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCC
Q 007985 265 QK--------------ISAIKDII-----------PLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAP 319 (582)
Q Consensus 265 ~~--------------i~~~~~i~-----------~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~ 319 (582)
++ +++++++. ++++++.+.|+||||++++|+++++++|..++ |+||+.|
T Consensus 229 ~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~------I~av~~~ 302 (513)
T 3iyg_B 229 TGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAG------VMAIEHA 302 (513)
T ss_pred CCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcC------ceEEecC
Confidence 83 56777665 47889999999999999999999999998754 5888877
Q ss_pred CcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhhc
Q 007985 320 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVT---IRKDSTTIIADAASKDEIQARIAQLKKELAET 396 (582)
Q Consensus 320 ~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~ 396 (582)
+ +.+|+|||++|||++++ +++++++++||+|++|+ ++++++++|.+|++
T Consensus 303 ~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------ 354 (513)
T 3iyg_B 303 D-----FVGVERLALVTGGEIAS-----TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL------------------ 354 (513)
T ss_pred C-----HHHHHHHHHHhCCEEec-----ccccCCHhHCCcccEEEEEEECCeEEEEEecCCC------------------
Confidence 5 46899999999999999 79999999999999998 67899999999865
Q ss_pred cchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhc-CcccCcchhHHHHHHhhHhhhhcccc
Q 007985 397 DSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEE-GIVPGGGAALVHLSDHVPAIKDKLED 475 (582)
Q Consensus 397 ~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~-gvVpGGGa~e~~l~~~L~~~~~~~~~ 475 (582)
+++|||+|||+|+.+++|+||+++||++++|+++++ ++|||||++|++++.+|++++.+..+
T Consensus 355 -----------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g 417 (513)
T 3iyg_B 355 -----------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPG 417 (513)
T ss_pred -----------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCc
Confidence 368999999999999999999999999999999999 59999999999999999999877666
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC----CCceeEEccCCcccccccCCccccHHHHHHHHHHHHH
Q 007985 476 ADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAAS 551 (582)
Q Consensus 476 ~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e 551 (582)
. +++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+|
T Consensus 418 ~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~ 496 (513)
T 3iyg_B 418 K-EAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAE 496 (513)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHH
Confidence 5 5799999999999999999999999999999999874 5689999999999999999999999999999999999
Q ss_pred HHHHHhchhhhhccCCC
Q 007985 552 VAGMVLTTQAIVVEKPK 568 (582)
Q Consensus 552 ~a~~lL~id~iI~~~p~ 568 (582)
+|++|||+|++|..+|+
T Consensus 497 ~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 497 AAEVILRVDNIIKAAPR 513 (513)
T ss_pred HHHHHHHHHHHHhcCCC
Confidence 99999999999998874
No 10
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=3.7e-98 Score=829.80 Aligned_cols=464 Identities=23% Similarity=0.374 Sum_probs=432.4
Q ss_pred cchhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhc
Q 007985 43 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT 121 (582)
Q Consensus 43 ~~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~ 121 (582)
.++++.||.++|..|+.||..|+++|++||||+||+|||++ +|+|+|||||+||||+|+++||. |+|++++|++|
T Consensus 14 ~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 89 (548)
T 1q3q_A 14 EGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPA----AKMMVEVAKTQ 89 (548)
T ss_dssp TTCEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHH----HHHHHHHHHHH
T ss_pred CCcceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchH----HHHHHHHHHhc
Confidence 36789999999999999999999999999999999999999 99999999999999999999998 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccC--CHHHHHHHHhhhcC------
Q 007985 122 NDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVATISAG------ 193 (582)
Q Consensus 122 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~------ 193 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ ++++|.++|+|+++
T Consensus 90 d~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~ 169 (548)
T 1q3q_A 90 DKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAES 169 (548)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGG
T ss_pred CCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhcccccc
Confidence 9999999999999999999999999999999999999999999999999999999987 48899999998864
Q ss_pred CchhHHHHHHHHHHHhCCC--C-------cEEEe--cCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEE
Q 007985 194 NDDLIGTMIADAIDKVGPD--G-------VLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLV 262 (582)
Q Consensus 194 ~~~~l~~li~~ai~~v~~~--g-------~I~i~--~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill 262 (582)
++++|++++++|+.+++++ | .|+++ +|++++|| ++++|++|+++|.|||| +++++||||++
T Consensus 170 ~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll 241 (548)
T 1q3q_A 170 HKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRM-------PKRVENAKIAL 241 (548)
T ss_dssp GHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTTS-------CSEESSEEEEE
T ss_pred chHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccce-EEEeeEEEeccCCCCCC-------cceecCCEEEE
Confidence 4689999999999999865 4 67775 99999999 99999999999999986 46799999999
Q ss_pred eccC-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeC
Q 007985 263 TDQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKA 318 (582)
Q Consensus 263 ~d~~-------------i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~ 318 (582)
+|++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |+||
T Consensus 242 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av-- 313 (548)
T 1q3q_A 242 INEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAV-- 313 (548)
T ss_dssp ECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEE--
T ss_pred EecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEE--
Confidence 9998 7778775 788999999999999999999999999999985 4666
Q ss_pred CCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHHHhh
Q 007985 319 PGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKDEIQARIAQLKKELAE 395 (582)
Q Consensus 319 ~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~ri~~l~~~l~~ 395 (582)
+++++++|+|||++||+++++ +++++++++||+|+.|++. +++|++|++|+++
T Consensus 314 ---~~~~k~~le~ia~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~---------------- 369 (548)
T 1q3q_A 314 ---RRVKKSDMEKLAKATGAKIVT-----NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKNP---------------- 369 (548)
T ss_dssp ---CSCCHHHHHHHHHHHCCCCBS-----SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSSC----------------
T ss_pred ---ccCCHHHHHHHHHHhCCeEec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC----------------
Confidence 577999999999999999999 7999999999999999864 8999999999763
Q ss_pred ccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhccc
Q 007985 396 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLE 474 (582)
Q Consensus 396 ~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~~ 474 (582)
++|||+|||+|+.+++|+||+++||++++++++++| +|||||++|++++.+|++++.+..
T Consensus 370 -------------------~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~ 430 (548)
T 1q3q_A 370 -------------------KAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVG 430 (548)
T ss_dssp -------------------SSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHC
T ss_pred -------------------CeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcC
Confidence 689999999999999999999999999999999999 999999999999999999987665
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC----CCceeEEccCCcccccccCCccccHHHHHHHHHHHH
Q 007985 475 DADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAA 550 (582)
Q Consensus 475 ~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~ 550 (582)
+. +++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 431 g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 509 (548)
T 1q3q_A 431 GK-EALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSAS 509 (548)
T ss_dssp HH-HHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHH
T ss_pred Cc-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHH
Confidence 54 5799999999999999999999999999999999863 468999999999999999999999999999999999
Q ss_pred HHHHHHhchhhhhccCCCCC
Q 007985 551 SVAGMVLTTQAIVVEKPKPK 570 (582)
Q Consensus 551 e~a~~lL~id~iI~~~p~~~ 570 (582)
|+|++||+||++|..+|+++
T Consensus 510 e~a~~iL~iD~iI~~~~~~~ 529 (548)
T 1q3q_A 510 EAAIMILRIDDVIAAKATKP 529 (548)
T ss_dssp HHHHHHHTCCEEEECCC---
T ss_pred HHHHHHHHHHHHHhcCCcCC
Confidence 99999999999999988764
No 11
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=3e-98 Score=830.37 Aligned_cols=471 Identities=22% Similarity=0.342 Sum_probs=422.5
Q ss_pred chhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhcc
Q 007985 44 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTN 122 (582)
Q Consensus 44 ~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~d 122 (582)
+.++.||.++|..|+.||..|+++|++||||+||+|||++ +|+|+|||||+||||+|+++||. |+|++++|++||
T Consensus 13 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 88 (543)
T 1a6d_B 13 GTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPA----AKMMVEVSKTQD 88 (543)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHH----HHHHHHHHTCTT
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchH----HHHHHHHHHhcC
Confidence 5678999999999999999999999999999999999999 99999999999999999999998 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccCC--HHHHHHHHhhhcC------C
Q 007985 123 DSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEG--RDDIKAVATISAG------N 194 (582)
Q Consensus 123 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~--~~~l~~va~ts~~------~ 194 (582)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. +++|.++|+|+++ +
T Consensus 89 ~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~ 168 (543)
T 1a6d_B 89 SFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVA 168 (543)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGG
T ss_pred CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhcccccccc
Confidence 9999999999999999999999999999999999999999999999999999999974 7889999998754 4
Q ss_pred chhHHHHHHHHHHHhCCC--Cc-------EEEe--cCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEe
Q 007985 195 DDLIGTMIADAIDKVGPD--GV-------LSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVT 263 (582)
Q Consensus 195 ~~~l~~li~~ai~~v~~~--g~-------I~i~--~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~ 263 (582)
+++|++|+++|+.+++++ |. |+++ +|++++|| ++++||+|+++|.|||| +++++||||+++
T Consensus 169 ~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll~ 240 (543)
T 1a6d_B 169 KDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGM-------PDVVKDAKIALL 240 (543)
T ss_dssp HHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccce-eEEccEEEecCCCCCCC-------cceecCCeEEEE
Confidence 689999999999999875 53 7765 99999999 99999999999999985 567999999999
Q ss_pred ccC-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCC
Q 007985 264 DQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAP 319 (582)
Q Consensus 264 d~~-------------i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~ 319 (582)
|++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |+||
T Consensus 241 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av--- 311 (543)
T 1a6d_B 241 DAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAV--- 311 (543)
T ss_dssp SSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEE---
T ss_pred ecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEe---
Confidence 998 6777665 789999999999999999999999999999975 4666
Q ss_pred CcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhc
Q 007985 320 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDEIQARIAQLKKELAET 396 (582)
Q Consensus 320 ~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~ 396 (582)
+++++++|+|||++|||++++ +++++++++||+|+.|++ ++++|++|++|+++
T Consensus 312 --~~v~k~~le~ia~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~----------------- 367 (543)
T 1a6d_B 312 --RRVKKSDMDKLAKATGASIVS-----TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKNP----------------- 367 (543)
T ss_dssp --CSCCHHHHHHHHHHHTCCEES-----CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESSS-----------------
T ss_pred --ccCCHHHHHHHHHHhCCceec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC-----------------
Confidence 577999999999999999999 799999999999999986 48999999998763
Q ss_pred cchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhcccc
Q 007985 397 DSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLED 475 (582)
Q Consensus 397 ~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~~~ 475 (582)
++|||+|||+|+.+++|+||+++||++++++++++| +|||||++|++++.+|++++.+..+
T Consensus 368 ------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g 429 (543)
T 1a6d_B 368 ------------------KAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGG 429 (543)
T ss_dssp ------------------SCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCS
T ss_pred ------------------ceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCC
Confidence 689999999999999999999999999999999999 9999999999999999999876666
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC----CCceeEEccCCcccccccCCccccHHHHHHHHHHHHH
Q 007985 476 ADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAAS 551 (582)
Q Consensus 476 ~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e 551 (582)
. +++++++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.||+++|++|+|
T Consensus 430 ~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e 508 (543)
T 1a6d_B 430 R-QQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATE 508 (543)
T ss_dssp S-HHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHH
T ss_pred h-HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHH
Confidence 5 5799999999999999999999999999999999863 4689999999999999999999999999999999999
Q ss_pred HHHHHhchhhhhccCCCCCCCCCCCCC
Q 007985 552 VAGMVLTTQAIVVEKPKPKTPVAAPPQ 578 (582)
Q Consensus 552 ~a~~lL~id~iI~~~p~~~~~~~~~~~ 578 (582)
+|++||++|++|..+|++.+++++.++
T Consensus 509 ~a~~iL~id~iI~~~~~~~~~~~~~~~ 535 (543)
T 1a6d_B 509 AAIMILRIDDVIATKSSSSSSNPPKSG 535 (543)
T ss_dssp HHHHHHHEEEEEC--------------
T ss_pred HHHHHHHHHHHHhcCccCCCCCCCCCC
Confidence 999999999999999876654443333
No 12
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.9e-97 Score=818.48 Aligned_cols=462 Identities=19% Similarity=0.287 Sum_probs=424.7
Q ss_pred chhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhcc
Q 007985 44 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTN 122 (582)
Q Consensus 44 ~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~d 122 (582)
+.+...|.+++..|+.||..|+++|++||||+||||||++ +|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 3 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 78 (515)
T 3iyg_H 3 GTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPA----AKTLVDIAKSQD 78 (515)
T ss_pred CccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHhh
Confidence 3456778999999999999999999999999999999999 99999999999999999999999 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccC--C----HHHHHHHHhhhcC---
Q 007985 123 DSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--G----RDDIKAVATISAG--- 193 (582)
Q Consensus 123 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~----~~~l~~va~ts~~--- 193 (582)
+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++ + ++.|.++|+|+++
T Consensus 79 ~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~ 158 (515)
T 3iyg_H 79 AEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKL 158 (515)
T ss_pred ceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999999985 5 5667999999874
Q ss_pred ---CchhHHHHHHHHHHHhCCC---CcEEEe--cCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEecc
Q 007985 194 ---NDDLIGTMIADAIDKVGPD---GVLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQ 265 (582)
Q Consensus 194 ---~~~~l~~li~~ai~~v~~~---g~I~i~--~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~ 265 (582)
++++|++++++|+.+++.+ ++|+++ .|++..|| ++++||+|+++|.||||+++ +.+++||||+++|+
T Consensus 159 ~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~p~~~~~----p~~~en~kIll~~~ 233 (515)
T 3iyg_H 159 ISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGGALEES-QLVAGVAFKKTFSYAGFEMQ----PKKYHNPMIALLNV 233 (515)
T ss_pred ccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCCCccce-EEEeeeEEecCccCcccccC----CccccccEEEEEcc
Confidence 5789999999999999876 677664 68899999 99999999999999999754 45899999999999
Q ss_pred C-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCCCc
Q 007985 266 K-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGF 321 (582)
Q Consensus 266 ~-------------i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~~~ 321 (582)
+ |++++++ .++++++.+.|++|||++++|++.++++|..+ |+ + ++
T Consensus 234 ~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~---gI---~-----~v 302 (515)
T 3iyg_H 234 ELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADR---DM---F-----CA 302 (515)
T ss_pred cccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHc---CC---c-----cc
Confidence 5 6777765 56799999999999999999999999988653 43 2 45
Q ss_pred chhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhccc
Q 007985 322 GERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDEIQARIAQLKKELAETDS 398 (582)
Q Consensus 322 ~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~ 398 (582)
+++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|+++
T Consensus 303 ~~~~k~~leria~~tGa~ii~-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------------------- 358 (515)
T 3iyg_H 303 GRVPEEDLKRTMMACGGSIQT-----SVNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA------------------- 358 (515)
T ss_pred ccccHHHHHHHHHHhCCEEee-----ccccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC-------------------
Confidence 788999999999999999999 689999999999999985 47899999999764
Q ss_pred hhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhcccchh
Q 007985 399 VYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLEDAD 477 (582)
Q Consensus 399 ~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~~~~~ 477 (582)
..|||+|||+|+.+++|+||+++||+|++|++++++ +|||||++|++++.+|++++.+.++.
T Consensus 359 ----------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~- 421 (515)
T 3iyg_H 359 ----------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGK- 421 (515)
T ss_pred ----------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChH-
Confidence 479999999999999999999999999999999985 99999999999999999998777665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC----CCceeEEccCCcccccccCCccccHHHHHHHHHHHHHHH
Q 007985 478 ERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVA 553 (582)
Q Consensus 478 ~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a 553 (582)
+++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+|+|
T Consensus 422 eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a 501 (515)
T 3iyg_H 422 QQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAA 501 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHH
Confidence 5699999999999999999999999999999999874 457999999999999999999999999999999999999
Q ss_pred HHHhchhhhhccC
Q 007985 554 GMVLTTQAIVVEK 566 (582)
Q Consensus 554 ~~lL~id~iI~~~ 566 (582)
++|||||++|..+
T Consensus 502 ~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 502 CLIVSVDETIKNP 514 (515)
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999643
No 13
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=8.1e-98 Score=826.60 Aligned_cols=461 Identities=23% Similarity=0.361 Sum_probs=425.2
Q ss_pred chhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhcc
Q 007985 44 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTN 122 (582)
Q Consensus 44 ~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~d 122 (582)
+.++.||.++|..|+.||..|+++|++||||+||+|||++ +|+|+|||||+||||+|+++||. |+|++++|++||
T Consensus 14 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd 89 (545)
T 1a6d_A 14 GTQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPT----AKMIVEVSKAQD 89 (545)
T ss_dssp ---CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHH----HHHHHGGGGCTT
T ss_pred cchhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchH----HHHHHHHHHhcC
Confidence 5779999999999999999999999999999999999999 99999999999999999999998 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccC-CHHHHHHHHhhhcC------Cc
Q 007985 123 DSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE-GRDDIKAVATISAG------ND 195 (582)
Q Consensus 123 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~~~l~~va~ts~~------~~ 195 (582)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++| + ++++|.++|+|+++ ++
T Consensus 90 ~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~ 168 (545)
T 1a6d_A 90 TAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSN 168 (545)
T ss_dssp TCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTH
T ss_pred CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccH
Confidence 9999999999999999999999999999999999999999999999999999999 7 78999999998854 46
Q ss_pred hhHHHHHHHHHHHhCCC---------CcEEEe--cCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEec
Q 007985 196 DLIGTMIADAIDKVGPD---------GVLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTD 264 (582)
Q Consensus 196 ~~l~~li~~ai~~v~~~---------g~I~i~--~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d 264 (582)
++|++|+++|+.+++++ +.|+++ +|++++|| ++++||+|+++|.|||| +++++||||+++|
T Consensus 169 ~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~ 240 (545)
T 1a6d_A 169 DFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKM-------PDVVKNAKIALID 240 (545)
T ss_dssp HHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTC-EEESEEEESCCCSCTTS-------CSEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceee-EEEeeEEEeccCCCCCC-------cceecCCEEEEEe
Confidence 89999999999999865 367776 99999999 99999999999999986 4679999999999
Q ss_pred cC-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCCC
Q 007985 265 QK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPG 320 (582)
Q Consensus 265 ~~-------------i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~~ 320 (582)
++ |++++++ .++++++.+.|+||||++++|+++|+++|+.|+ |+||
T Consensus 241 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av---- 310 (545)
T 1a6d_A 241 SALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAV---- 310 (545)
T ss_dssp SCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEE----
T ss_pred cCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEe----
Confidence 98 6677665 789999999999999999999999999999986 4666
Q ss_pred cchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHHHhhcc
Q 007985 321 FGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIR---KDSTTIIADAASKDEIQARIAQLKKELAETD 397 (582)
Q Consensus 321 ~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~ 397 (582)
+++++++|+|||++||+++++ +++++++++||+|+.|++. +++|++|++|+++
T Consensus 311 -~~~~k~~le~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~------------------ 366 (545)
T 1a6d_A 311 -RRVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKNP------------------ 366 (545)
T ss_dssp -CSCCHHHHHHHHHHHCCCEES-----SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESCS------------------
T ss_pred -ccCCHHHHHHHHHHhCCeeec-----ccccCCHHHCCCceEEEEEEecCceEEEEecCCCC------------------
Confidence 477999999999999999999 7999999999999999864 7899999998763
Q ss_pred chhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhcccch
Q 007985 398 SVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLEDA 476 (582)
Q Consensus 398 ~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~~~~ 476 (582)
++|||+|||+|+.+++|+||+++||++++++++++| +|||||++|++++.+|++++.+.++.
T Consensus 367 -----------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~ 429 (545)
T 1a6d_A 367 -----------------KAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGR 429 (545)
T ss_dssp -----------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHH
T ss_pred -----------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCcc
Confidence 689999999999999999999999999999999999 99999999999999999998766654
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC----CCceeEEccCCcccccccCCccccHHHHHHHHHHHHHH
Q 007985 477 DERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASV 552 (582)
Q Consensus 477 ~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~ 552 (582)
+++++++|++||+.||++||+|||+|+.+++.+|++. +.++|||+.+|++.||++.|||||+.||+++|++|+|+
T Consensus 430 -~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~ 508 (545)
T 1a6d_A 430 -EQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEV 508 (545)
T ss_dssp -HHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHH
Confidence 5799999999999999999999999999999999853 46899999999999999999999999999999999999
Q ss_pred HHHHhchhhhhccCCCC
Q 007985 553 AGMVLTTQAIVVEKPKP 569 (582)
Q Consensus 553 a~~lL~id~iI~~~p~~ 569 (582)
|++||+||++|..+|++
T Consensus 509 a~~iL~id~iI~~~~~~ 525 (545)
T 1a6d_A 509 ATMILRIDDVIASKKST 525 (545)
T ss_dssp HHHHHTCCEEC------
T ss_pred HHHHHHHHHHHhcccCC
Confidence 99999999999998876
No 14
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.3e-97 Score=817.39 Aligned_cols=464 Identities=22% Similarity=0.285 Sum_probs=424.9
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhccc
Q 007985 45 KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTND 123 (582)
Q Consensus 45 ~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~d~ 123 (582)
.+..+|.++|..|+.||..|+++|++||||+||+|||++ +|+|+|||||+||||+|+++||. |+|++++|++||+
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~ 78 (529)
T 3iyg_A 3 GDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPA----AKVLCELADLQDK 78 (529)
T ss_pred cchhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChH----HHHHHHHHHHhhh
Confidence 467899999999999999999999999999999999999 99999999999999999999998 9999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhh-cccccC--CHHHHHHHHhhhcC------C
Q 007985 124 SAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEK-RARPIE--GRDDIKAVATISAG------N 194 (582)
Q Consensus 124 ~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~-~s~~v~--~~~~l~~va~ts~~------~ 194 (582)
++||||||+||||++||+++.+++++|+||..|++||++|++.++++|++ +++|++ +++.|.++|+||++ +
T Consensus 79 e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~ 158 (529)
T 3iyg_A 79 EVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGIN 158 (529)
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCccccc
Confidence 99999999999999999999999999999999999999999999999999 999987 78899999999975 4
Q ss_pred chhHHHHHHHHHHHhC---CCC-----c--EEE--ecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEE
Q 007985 195 DDLIGTMIADAIDKVG---PDG-----V--LSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLV 262 (582)
Q Consensus 195 ~~~l~~li~~ai~~v~---~~g-----~--I~i--~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill 262 (582)
+++|++|+++|+.+++ ++| . |++ ..|+++.|| ++++||+|+++|.|||| ++.++||||++
T Consensus 159 ~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~ien~kIll 230 (529)
T 3iyg_A 159 GDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMES-MLINGYALNCVVGSQGM-------PKRIVNAKIAC 230 (529)
T ss_pred HHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccce-EEEeeeEEecCcccccC-------CcccCCceEEE
Confidence 7899999999999997 344 2 544 589999999 99999999999999974 56789999999
Q ss_pred eccCc-------------CCHHH-----------HHHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeC
Q 007985 263 TDQKI-------------SAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKA 318 (582)
Q Consensus 263 ~d~~i-------------~~~~~-----------i~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~ 318 (582)
+|+++ +++++ +.++++++.+.|++|||++++|+++|+++|+.|+ |++|
T Consensus 231 l~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av-- 302 (529)
T 3iyg_A 231 LDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAV-- 302 (529)
T ss_pred ecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Ccee--
Confidence 99974 33433 5578899999999999999999999999999985 3555
Q ss_pred CCcchhhhHHHHHHHHHhCCeEeccccCCc-ccCCCcCCcceeEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHh
Q 007985 319 PGFGERRKALLQDIAIVTGAEFQAGDLGLL-IENTSVEQLGTARKVT---IRKDSTTIIADAASKDEIQARIAQLKKELA 394 (582)
Q Consensus 319 ~~~~~~~~~~l~~ia~~tG~~iis~~~~~~-~~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~ 394 (582)
+++++++|+|||++|||+++++..+++ .+++++++||+|+.|+ ++++++++|++|+++
T Consensus 303 ---~~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~--------------- 364 (529)
T 3iyg_A 303 ---RRVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR--------------- 364 (529)
T ss_pred ---ccCCHHHHHHHHHHhCCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC---------------
Confidence 467899999999999999999654444 2456688999999998 789999999999764
Q ss_pred hccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhcc
Q 007985 395 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKL 473 (582)
Q Consensus 395 ~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~ 473 (582)
++|||+|||+|+.+++|.||++|||++++++++++| +|||||++|++++.+|++++.+.
T Consensus 365 --------------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~ 424 (529)
T 3iyg_A 365 --------------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSM 424 (529)
T ss_pred --------------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhc
Confidence 579999999999999999999999999999999999 99999999999999999998877
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC----C--------CceeEEccCCcccccccCCccccHHH
Q 007985 474 EDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----E--------WTTGYNAMTDKYENMLQAGVIDPAKV 541 (582)
Q Consensus 474 ~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~----~--------~~~G~d~~~g~i~d~~~~gI~dp~~v 541 (582)
++. +++++++|++||+.||++||+|||+|+.+++.+|++. + .++|||+.+|++.||++.|||||+.|
T Consensus 425 ~g~-eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~v 503 (529)
T 3iyg_A 425 GSR-EQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIV 503 (529)
T ss_pred CCh-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHH
Confidence 666 4699999999999999999999999999999999874 2 57999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhchhhhhccCC
Q 007985 542 TRCALQNAASVAGMVLTTQAIVVEKP 567 (582)
Q Consensus 542 k~~~l~~A~e~a~~lL~id~iI~~~p 567 (582)
|+++|++|+|+|++|||||++|...|
T Consensus 504 k~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 504 KVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 99999999999999999999998754
No 15
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=2.7e-98 Score=827.48 Aligned_cols=463 Identities=18% Similarity=0.287 Sum_probs=426.7
Q ss_pred chhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhcc
Q 007985 44 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTN 122 (582)
Q Consensus 44 ~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~d 122 (582)
.+++.||.++|..|+.||..|+++|++||||+||||||++ +|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 11 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd 86 (528)
T 3p9d_D 11 FKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPV----ARMLVEVSAAQD 86 (528)
T ss_dssp SCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTT----HHHHHHHHHHHH
T ss_pred cchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHH----HHHHHHHHHHhh
Confidence 5778899999999999999999999999999999999999 99999999999999999999999 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccC--CHHHHHHHHhhhcCC------
Q 007985 123 DSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVATISAGN------ 194 (582)
Q Consensus 123 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~------ 194 (582)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++
T Consensus 87 ~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~ 166 (528)
T 3p9d_D 87 SEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQY 166 (528)
T ss_dssp HHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTT
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchh
Confidence 999999999999999999999999999999999999999999999999999999998 789999999999875
Q ss_pred chhHHHHHHHHHHHhCC--CCcEEE-------ecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEecc
Q 007985 195 DDLIGTMIADAIDKVGP--DGVLSI-------ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQ 265 (582)
Q Consensus 195 ~~~l~~li~~ai~~v~~--~g~I~i-------~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~ 265 (582)
+++|++|+++|+.++++ +|.|.+ ..|++++|| ++++||+|+++|.|||| |+++++||||+++|+
T Consensus 167 ~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~~ 239 (528)
T 3p9d_D 167 SSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDT-EMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQF 239 (528)
T ss_dssp HHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCC-EEESSCBCCCCCCCSSS------CCSEESSEEEEEECC
T ss_pred HHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccce-EEEeeeEEeecccCccc------CcccccCceEEEEec
Confidence 68999999999999987 454332 359999998 99999999999999986 788999999999999
Q ss_pred CcC-------------CHHH-----------HHHHHHHHHhcCCCEEEEecCc-----cHHHHHHHHHhhhcCCceEEEe
Q 007985 266 KIS-------------AIKD-----------IIPLLEKTTQLRAPLLIIAEDV-----TGEALATLVVNKLRGILNVAAI 316 (582)
Q Consensus 266 ~i~-------------~~~~-----------i~~~le~i~~~~~~lvii~~~i-----~~~al~~L~~n~~~g~~~v~aV 316 (582)
+++ ++++ +.++++++.+.|+||||++++| +++++++|..|+ +++|
T Consensus 240 ~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~av 313 (528)
T 3p9d_D 240 QISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IMVV 313 (528)
T ss_dssp CSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CCEE
T ss_pred cccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cEEE
Confidence 865 4433 6789999999999999999999 999999998765 3566
Q ss_pred eCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHH
Q 007985 317 KAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDEIQARIAQLKKEL 393 (582)
Q Consensus 317 k~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~ri~~l~~~l 393 (582)
+ ++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|.+|....
T Consensus 314 ~-----~~~k~~le~ia~~tGa~ii~-----~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~------------- 370 (528)
T 3p9d_D 314 K-----DIEREEIEFLSKGLGCKPIA-----DIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN------------- 370 (528)
T ss_dssp E-----CCCTHHHHHHHHHHTCCCCS-----CSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGG-------------
T ss_pred E-----eCCHHHHHHHHHHHCCEEec-----ccccCCHHHCCcccEEEEEEECCEEEEEEEcccccC-------------
Confidence 5 66889999999999999999 688999999999999984 577889999886310
Q ss_pred hhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhc
Q 007985 394 AETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDK 472 (582)
Q Consensus 394 ~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~ 472 (582)
.+++|||+|||+|+.+++|+||+++||++++++++++| +|||||++|++++.+|++++.+
T Consensus 371 -------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~ 431 (528)
T 3p9d_D 371 -------------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARS 431 (528)
T ss_dssp -------------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTT
T ss_pred -------------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhc
Confidence 15789999999999999999999999999999999999 9999999999999999998876
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC----CCceeEEccCCcccccccCCccccHHHHHHHHHH
Q 007985 473 LEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQN 548 (582)
Q Consensus 473 ~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~ 548 (582)
..+. +++++++|++||+.||++||+|||+|+.+++.+|+.. ++++|||+.+|++.||++.|||||+.||+++|++
T Consensus 432 ~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~ 510 (528)
T 3p9d_D 432 MEGV-QAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITL 510 (528)
T ss_dssp SCHH-HHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHH
T ss_pred cChH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHHH
Confidence 6554 5799999999999999999999999999999999884 4689999999999999999999999999999999
Q ss_pred HHHHHHHHhchhhhhccC
Q 007985 549 AASVAGMVLTTQAIVVEK 566 (582)
Q Consensus 549 A~e~a~~lL~id~iI~~~ 566 (582)
|+|+|++|||||++|..+
T Consensus 511 A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 511 ASECVKSILRIDDIAFSR 528 (528)
T ss_dssp HHHHHHHHHHCSCCCBCC
T ss_pred HHHHHHHHHhhhHheecC
Confidence 999999999999998754
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.2e-96 Score=808.98 Aligned_cols=458 Identities=21% Similarity=0.299 Sum_probs=420.0
Q ss_pred chhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhcc
Q 007985 44 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTN 122 (582)
Q Consensus 44 ~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~d 122 (582)
.++..||.++|..|+.||..|+++|++||||+||+|||++ +|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 2 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~----Akll~~~a~~qd 77 (515)
T 3iyg_E 2 RKSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQI----AKLMVELSKSQD 77 (515)
T ss_pred cchhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHH----HHHHHHHHHHhh
Confidence 3567899999999999999999999999999999999999 99999999999999999999999 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccCC----HHHHHHHHhhhcCC----
Q 007985 123 DSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEG----RDDIKAVATISAGN---- 194 (582)
Q Consensus 123 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~----~~~l~~va~ts~~~---- 194 (582)
+++||||||+||||++||+++.+++.+|+||+.|++||++|++.++++|+++++|++. ++.|.++|+||+++
T Consensus 78 ~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~ 157 (515)
T 3iyg_E 78 DEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVN 157 (515)
T ss_pred hhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchh
Confidence 9999999999999999999999999999999999999999999999999999998853 68899999999875
Q ss_pred --chhHHHHHHHHHHHhCCC-------CcEEE--ecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEe
Q 007985 195 --DDLIGTMIADAIDKVGPD-------GVLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVT 263 (582)
Q Consensus 195 --~~~l~~li~~ai~~v~~~-------g~I~i--~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~ 263 (582)
.+.|++++++|+..+.+. +.|++ ..|+++.|| ++++||+|+++|.|||| +..++||+|+++
T Consensus 158 ~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lv~G~~~dk~~~~~~m-------~~~~~~~kIall 229 (515)
T 3iyg_E 158 SCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDT-KLIKGVIVDKDFSHPQM-------PKQVEDAKIAIL 229 (515)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccc-eEEeeEEEecccccccc-------cccCCCceEEEE
Confidence 478999999999988642 23544 579999999 99999999999999986 446778889888
Q ss_pred ccC-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCC
Q 007985 264 DQK-------------ISAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAP 319 (582)
Q Consensus 264 d~~-------------i~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~ 319 (582)
+++ +++++++ .++++++.+.|+||||++++|+++|+++|+.|++ .+++
T Consensus 230 ~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I------~~v~-- 301 (515)
T 3iyg_E 230 TCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDL------PAVR-- 301 (515)
T ss_pred cCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCC------EEEe--
Confidence 876 4566665 6789999999999999999999999999999875 4443
Q ss_pred CcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEE-----ecceEEEEeCCCChHHHHHHHHHHHHHHh
Q 007985 320 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI-----RKDSTTIIADAASKDEIQARIAQLKKELA 394 (582)
Q Consensus 320 ~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i-----~~~~~~~~~~~~~~~~i~~ri~~l~~~l~ 394 (582)
++++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|+++
T Consensus 302 ---~v~k~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~--------------- 358 (515)
T 3iyg_E 302 ---WVGGPEIELIAIATGGRIVP-----RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS--------------- 358 (515)
T ss_pred ---ccCHHHHHHHHHHhCCEEec-----ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC---------------
Confidence 55789999999999999999 799999999999999986 34899999999774
Q ss_pred hccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhcc
Q 007985 395 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKL 473 (582)
Q Consensus 395 ~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~ 473 (582)
..|||+|||+|+.+++|+||+++||++++++++++| +|||||++|++++.+|++++.+.
T Consensus 359 --------------------~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~ 418 (515)
T 3iyg_E 359 --------------------RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKC 418 (515)
T ss_pred --------------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccC
Confidence 468999999999999999999999999999999999 99999999999999999998776
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhc-----CCCceeEEccCCcccccccCCccccHHHHHHHHHH
Q 007985 474 EDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD-----SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQN 548 (582)
Q Consensus 474 ~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~-----~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~ 548 (582)
++. +++++++|++||+.||++||+|||+|+.+++.+|+. .++++|||+.+|++.||++.|||||+.||+++|++
T Consensus 419 ~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~ 497 (515)
T 3iyg_E 419 PTL-EQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISL 497 (515)
T ss_pred CcH-HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHH
Confidence 665 569999999999999999999999999999999986 25689999999999999999999999999999999
Q ss_pred HHHHHHHHhchhhhhcc
Q 007985 549 AASVAGMVLTTQAIVVE 565 (582)
Q Consensus 549 A~e~a~~lL~id~iI~~ 565 (582)
|+|+|++|||||++|..
T Consensus 498 A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 498 ATQMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHHHHHhHHHhhcC
Confidence 99999999999999864
No 17
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=2e-98 Score=831.53 Aligned_cols=468 Identities=19% Similarity=0.269 Sum_probs=425.8
Q ss_pred cchhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhc
Q 007985 43 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT 121 (582)
Q Consensus 43 ~~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~ 121 (582)
.+.+..+|.++|..|+.||..|+++|++||||+||||||++ +|+|+|||||+||||+|+++||. |+|++++|++|
T Consensus 15 ~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~q 90 (550)
T 3p9d_G 15 EGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPA----AKTLVDISRAQ 90 (550)
T ss_dssp -CCCEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHH----HHHHHHHHHHH
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHH----HHHHHHHHHHh
Confidence 35678899999999999999999999999999999999999 99999999999999999999998 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccCC-----HHHHHHHHhhhcC---
Q 007985 122 NDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEG-----RDDIKAVATISAG--- 193 (582)
Q Consensus 122 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~l~~va~ts~~--- 193 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++. ++.|.++|+||++
T Consensus 91 d~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~ 170 (550)
T 3p9d_G 91 DAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKL 170 (550)
T ss_dssp HTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTT
T ss_pred hhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCcc
Confidence 99999999999999999999999999999999999999999999999999999999863 6789999999864
Q ss_pred ---CchhHHHHHHHHHHHhCCC-------CcEEEecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEe
Q 007985 194 ---NDDLIGTMIADAIDKVGPD-------GVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVT 263 (582)
Q Consensus 194 ---~~~~l~~li~~ai~~v~~~-------g~I~i~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~ 263 (582)
++++|++|+++|+.+++++ ++++ ++|++++|| ++++||+|+++|.||||.+ |+..++||||+++
T Consensus 171 ~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vik-v~Gg~~~ds-~lv~G~~~dk~~~s~yf~~----~~~~~en~kIll~ 244 (550)
T 3p9d_G 171 IHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKK-IPGGAMEES-LFINGVAFKKTFSYAGFEQ----QPKKFNNPKILSL 244 (550)
T ss_dssp TGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCB-CCSSCGGGC-CCCSSEEECCCSSCTTCSC----SCSCCSSCCEEEE
T ss_pred ccccHhHHHHHHHHHHHHhCccccCchheeEEE-ecCCCccce-eEEeeEEEecccccccccc----CcccccCceEEEe
Confidence 4789999999999999843 3444 459999999 9999999999999999965 5556999999999
Q ss_pred ccC-------------cCCHHHHH-----------HHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCC
Q 007985 264 DQK-------------ISAIKDII-----------PLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAP 319 (582)
Q Consensus 264 d~~-------------i~~~~~i~-----------~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~ 319 (582)
|++ +++++++. ++++++.+.|++|||++++|++.++++|..+ |+ .
T Consensus 245 ~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~---gI---~----- 313 (550)
T 3p9d_G 245 NVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADR---NI---F----- 313 (550)
T ss_dssp CSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGG---TC---E-----
T ss_pred ccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHc---CC---c-----
Confidence 998 45665554 4678899999999999999999999988754 33 3
Q ss_pred CcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhc
Q 007985 320 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDEIQARIAQLKKELAET 396 (582)
Q Consensus 320 ~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~ 396 (582)
+++++++.+|++||++||+++++ +++++++++||+|+.|++ +++++++|++|+++
T Consensus 314 ~v~~v~k~~lerIa~~tGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~~----------------- 371 (550)
T 3p9d_G 314 CAGRVSADDMNRVIQAVGGSIQS-----TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQA----------------- 371 (550)
T ss_dssp EEECCCTTHHHHHHHHTCCCCBS-----SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTTC-----------------
T ss_pred cccCcCHHHHHHHHHHhCCceec-----chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCCC-----------------
Confidence 34678899999999999999999 799999999999999985 68899999999763
Q ss_pred cchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhcccc
Q 007985 397 DSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLED 475 (582)
Q Consensus 397 ~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~~~ 475 (582)
++|||+|||+|+.+++|+||+++||||++|+++++| +|||||++|++++.+|++++.+.++
T Consensus 372 ------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g 433 (550)
T 3p9d_G 372 ------------------KTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAG 433 (550)
T ss_dssp ------------------CCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCS
T ss_pred ------------------ceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCCh
Confidence 579999999999999999999999999999999999 9999999999999999999877666
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC----CCceeEEccCCcccccccCCccccHHHHHHHHHHHHH
Q 007985 476 ADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAAS 551 (582)
Q Consensus 476 ~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e 551 (582)
. +++++++|++||+.||++||+|||+|+.+++.+|+.. ++++|||+.+|++.||++.|||||+.||+++|++|+|
T Consensus 434 ~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~ 512 (550)
T 3p9d_G 434 K-QQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATE 512 (550)
T ss_dssp T-THHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHH
Confidence 5 5699999999999999999999999999999999873 5689999999999999999999999999999999999
Q ss_pred HHHHHhchhhhhccCCCCCCC
Q 007985 552 VAGMVLTTQAIVVEKPKPKTP 572 (582)
Q Consensus 552 ~a~~lL~id~iI~~~p~~~~~ 572 (582)
+|++|||||++|..+|+++.+
T Consensus 513 ~a~~iL~id~ii~~~~~~~~~ 533 (550)
T 3p9d_G 513 ATNLILSVDETITNKGSESAN 533 (550)
T ss_dssp HHHHHHTEEEEECCCCCC---
T ss_pred HHHHHHhHHHHhhCCCccccc
Confidence 999999999999999877654
No 18
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.8e-96 Score=809.26 Aligned_cols=458 Identities=22% Similarity=0.322 Sum_probs=421.4
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhccc
Q 007985 45 KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTND 123 (582)
Q Consensus 45 ~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~d~ 123 (582)
++..+|.++|..|+.||..|+++|++||||+||+|||++ +|+|+|||||+||||+|+++||+ |+|++++|++||+
T Consensus 4 ~~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~~~a~~qd~ 79 (518)
T 3iyg_D 4 QDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPA----ARMLVELSKAQDI 79 (518)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHH----HHHHHHHHHHhhh
Confidence 456689999999999999999999999999999999999 99999999999999999999999 9999999999999
Q ss_pred ccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccC--CHHHHHHHHhhhcCCc------
Q 007985 124 SAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVATISAGND------ 195 (582)
Q Consensus 124 ~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~~------ 195 (582)
++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||++++
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~ 159 (518)
T 3iyg_D 80 EAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYS 159 (518)
T ss_pred hhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhH
Confidence 99999999999999999999999999999999999999999999999999999998 7889999999999864
Q ss_pred hhHHHHHHHHHHHhCC---CCc-----EEEe--cCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEecc
Q 007985 196 DLIGTMIADAIDKVGP---DGV-----LSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQ 265 (582)
Q Consensus 196 ~~l~~li~~ai~~v~~---~g~-----I~i~--~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~ 265 (582)
++|++|+++|+.++++ +|. |+++ .|++..|+ ++++||+|+++|.| . |+..++||+|+++++
T Consensus 160 ~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds-~lv~G~~~dk~~~~-~-------mp~~i~n~kIlll~~ 230 (518)
T 3iyg_D 160 SLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDC-ELVEGLVLTQKVAN-S-------GITRVEKAKIGLIQF 230 (518)
T ss_pred HHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhh-eEeccEEEeccccc-C-------CCccccCceEEEEEe
Confidence 8999999999999985 554 6554 78899998 99999999999987 2 556789999999988
Q ss_pred Cc-------------CCHH-----------HHHHHHHHHHhcCCCEEEE-----ecCccHHHHHHHHHhhhcCCceEEEe
Q 007985 266 KI-------------SAIK-----------DIIPLLEKTTQLRAPLLII-----AEDVTGEALATLVVNKLRGILNVAAI 316 (582)
Q Consensus 266 ~i-------------~~~~-----------~i~~~le~i~~~~~~lvii-----~~~i~~~al~~L~~n~~~g~~~v~aV 316 (582)
++ ++++ .+.++++++.+.|+||||+ +++|+++|+++|+.|+ |+||
T Consensus 231 ~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~------I~av 304 (518)
T 3iyg_D 231 CLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMK------IMVV 304 (518)
T ss_pred eccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcC------cEEE
Confidence 75 4444 3678899999999999999 8999999999999875 5888
Q ss_pred eCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEE---ec-ceEEEEeCCCChHHHHHHHHHHHHH
Q 007985 317 KAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RK-DSTTIIADAASKDEIQARIAQLKKE 392 (582)
Q Consensus 317 k~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i---~~-~~~~~~~~~~~~~~i~~ri~~l~~~ 392 (582)
++|. +.+|+|||++|||++++ +++++++++||+|+.|++ ++ +++++|++|++
T Consensus 305 ~~~~-----~~~le~ia~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~-------------- 360 (518)
T 3iyg_D 305 KDIE-----REDIEFICKTIGTKPVA-----HVDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS-------------- 360 (518)
T ss_pred ecCC-----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC--------------
Confidence 8774 56899999999999999 699999999999999985 35 68899999864
Q ss_pred HhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhh
Q 007985 393 LAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKD 471 (582)
Q Consensus 393 l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~ 471 (582)
++++|||+|||+|+.+++|+||+++||++++++++++| +|||||++|++++.+|++++.
T Consensus 361 --------------------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~ 420 (518)
T 3iyg_D 361 --------------------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSR 420 (518)
T ss_pred --------------------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhh
Confidence 24789999999999999999999999999999999999 999999999999999999987
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhc----CCCceeEEccCCcccccccCCccccHHHHHHHHH
Q 007985 472 KLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD----SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQ 547 (582)
Q Consensus 472 ~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~----~~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~ 547 (582)
+.++. +++++++|++||+.||++||+|||+|+.+++.+|++ .++++|||+.+|++.||++.|||||+.||+++|+
T Consensus 421 ~~~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 499 (518)
T 3iyg_D 421 TLSGM-ESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALT 499 (518)
T ss_pred cCChH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHH
Confidence 76665 579999999999999999999999999999999988 3568999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhhhhccC
Q 007985 548 NAASVAGMVLTTQAIVVEK 566 (582)
Q Consensus 548 ~A~e~a~~lL~id~iI~~~ 566 (582)
+|+|+|++|||||++|..+
T Consensus 500 ~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 500 LATETVRSILKIDDVVNTR 518 (518)
T ss_pred HHHHHHHHHHhhcceEecC
Confidence 9999999999999998753
No 19
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=1.3e-96 Score=818.94 Aligned_cols=476 Identities=21% Similarity=0.299 Sum_probs=425.8
Q ss_pred Cccc-eecccc-hhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHH
Q 007985 35 YRRF-AVRASA-KDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGA 111 (582)
Q Consensus 35 ~~~~-~~~~~~-~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga 111 (582)
++|+ .++..+ +++.||.++|..|+.||..|+++|++||||+||+|||++ +|+|+|||||+||||+|+++||+ |
T Consensus 26 ~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----A 101 (562)
T 3p9d_E 26 GRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEI----A 101 (562)
T ss_dssp ----CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHH----H
T ss_pred CCCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHH----H
Confidence 4555 456544 789999999999999999999999999999999999999 99999999999999999999999 9
Q ss_pred HHHHHHHhhcccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccCCH------HHHH
Q 007985 112 ALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIEGR------DDIK 185 (582)
Q Consensus 112 ~Ll~e~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~------~~l~ 185 (582)
+|++++|++||+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|+++. +.|.
T Consensus 102 kll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~ 181 (562)
T 3p9d_E 102 KLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLL 181 (562)
T ss_dssp HHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998632 6899
Q ss_pred HHHhhhcCC------chhHHHHHHHHHHHhCCC-------CcEEE--ecCCCccccceeeeeeEEeeecccCCCccCccc
Q 007985 186 AVATISAGN------DDLIGTMIADAIDKVGPD-------GVLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEK 250 (582)
Q Consensus 186 ~va~ts~~~------~~~l~~li~~ai~~v~~~-------g~I~i--~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~ 250 (582)
++|+||+++ .++|++++++|+..+.+. +.|++ ..|++++|| ++++||+|+++|.||||.++.+
T Consensus 182 ~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~- 259 (562)
T 3p9d_E 182 RAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVL- 259 (562)
T ss_dssp HHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC----
T ss_pred HHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccc-
Confidence 999999874 478999999999988652 23444 579999999 9999999999999999865432
Q ss_pred CceeecCeeEEEeccCc-------------CCHHH-----------HHHHHHHHHhcCCCEEEEecCccHHHHHHHHHhh
Q 007985 251 LIVEFENARVLVTDQKI-------------SAIKD-----------IIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNK 306 (582)
Q Consensus 251 ~~~~~~n~~Ill~d~~i-------------~~~~~-----------i~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~ 306 (582)
....++|++|+++++++ +++++ +.++++++.+.|+||||++++|+++|+++|+.|+
T Consensus 260 ~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~ 339 (562)
T 3p9d_E 260 PKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQND 339 (562)
T ss_dssp --TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTT
T ss_pred cccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCC
Confidence 12234899999998863 44444 5689999999999999999999999999999987
Q ss_pred hcCCceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEE-----ecceEEEEeCCCChHH
Q 007985 307 LRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI-----RKDSTTIIADAASKDE 381 (582)
Q Consensus 307 ~~g~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i-----~~~~~~~~~~~~~~~~ 381 (582)
+ .+| +++++++|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|+++
T Consensus 340 I------~~v-----~~v~k~~le~ia~~TGa~iis-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~-- 401 (562)
T 3p9d_E 340 L------PAV-----RWVGGQELEHIAISTNGRIVP-----RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET-- 401 (562)
T ss_dssp C------CCE-----ECCCTTTHHHHHHHHCCCEEE-----SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC--
T ss_pred C------EEE-----eccCHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC--
Confidence 5 334 455788999999999999999 699999999999999997 35899999999764
Q ss_pred HHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHH
Q 007985 382 IQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALV 460 (582)
Q Consensus 382 i~~ri~~l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~ 460 (582)
..|||+|||+|+.+++|+||+++||++++|+++++| +|||||++|+
T Consensus 402 ---------------------------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~ 448 (562)
T 3p9d_E 402 ---------------------------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEV 448 (562)
T ss_dssp ---------------------------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHH
T ss_pred ---------------------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHH
Confidence 478999999999999999999999999999999999 9999999999
Q ss_pred HHHHhhHhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhc-----CCCceeEEccCCcccccccCCc
Q 007985 461 HLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD-----SEWTTGYNAMTDKYENMLQAGV 535 (582)
Q Consensus 461 ~l~~~L~~~~~~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~-----~~~~~G~d~~~g~i~d~~~~gI 535 (582)
+++.+|++++.+..+. +++++++|++||+.||++||+|||+|+.+++.+|++ .++++|||+.+|++.||++.||
T Consensus 449 ~~s~~L~~~~~~~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI 527 (562)
T 3p9d_E 449 TMSLAVSEEADKQRGI-DQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFV 527 (562)
T ss_dssp HHHHHHHHHHHTTCTT-HHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTC
T ss_pred HHHHHHHHHhccCccH-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccC
Confidence 9999999998876665 569999999999999999999999999999999986 3578999999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHhchhhhhccCCC
Q 007985 536 IDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 568 (582)
Q Consensus 536 ~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~p~ 568 (582)
|||+.||+++|++|+|+|++|||||++|..++.
T Consensus 528 ~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 528 VDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp EEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999999999999987654
No 20
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.3e-97 Score=823.14 Aligned_cols=465 Identities=21% Similarity=0.332 Sum_probs=423.6
Q ss_pred chhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec--CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhc
Q 007985 44 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE--FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT 121 (582)
Q Consensus 44 ~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~--~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~ 121 (582)
.+++.||.++|..|+.||..|+++|++||||+||||||++ +|+|+|||||+||+|+|+++||. |+|++++|++|
T Consensus 9 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~----Akll~e~a~~q 84 (527)
T 3p9d_B 9 QVTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPA----AKVLVNISKVQ 84 (527)
T ss_dssp CEEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHH----HHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHH----HHHHHHHHHHh
Confidence 6789999999999999999999999999999999999998 79999999999999999999997 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHhhhhC-CCChHHHHHHHHHHHHHHHHHHhhcccccCC-----HHHHHHHHhhhcCC-
Q 007985 122 NDSAGDGTTTASVLAREIIKLGLLSVTS-GANPVSLKRGIDKTVHGLVEELEKRARPIEG-----RDDIKAVATISAGN- 194 (582)
Q Consensus 122 d~~~GDGTTt~vvLa~~Ll~~~~~li~~-g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~~-----~~~l~~va~ts~~~- 194 (582)
|+++||||||+||||++||+++.+++.+ |+||+.|++||++|++.++++|+++++|+++ +++|.++|+||+++
T Consensus 85 d~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK 164 (527)
T 3p9d_B 85 DDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSK 164 (527)
T ss_dssp HHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred HhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccC
Confidence 9999999999999999999999999999 9999999999999999999999999999985 78999999999976
Q ss_pred -----chhHHHHHHHHHHHhCCCC---cEEEe--cCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEec
Q 007985 195 -----DDLIGTMIADAIDKVGPDG---VLSIE--SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTD 264 (582)
Q Consensus 195 -----~~~l~~li~~ai~~v~~~g---~I~i~--~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d 264 (582)
+++|++|+++|+.++++++ +|+++ .|+++.|+ ++++||+|+++|.||| | ..++||+|++++
T Consensus 165 ~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg~~~ds-~lv~G~~~dk~~~~~~----p----~~~~n~kIlll~ 235 (527)
T 3p9d_B 165 ILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGGKLSDS-FLDEGFILAKKFGNNQ----P----KRIENAKILIAN 235 (527)
T ss_dssp GGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCSSSSCC-CEESSCCCSCCCSSSC----C----SCCSSCEEEEEC
T ss_pred cccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCCCcccc-EEEEeEEEecccCCCC----C----eeeecceEEEec
Confidence 6899999999999999887 67665 69999998 9999999999999996 2 357899999998
Q ss_pred cCc--------------CCHHHH-----------HHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCC
Q 007985 265 QKI--------------SAIKDI-----------IPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAP 319 (582)
Q Consensus 265 ~~i--------------~~~~~i-----------~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~ 319 (582)
+++ ++++++ .+.++++.+.|++|||++++|+++++++|..|+ +++|+.
T Consensus 236 ~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~- 308 (527)
T 3p9d_B 236 TTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIEH- 308 (527)
T ss_dssp SCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCC-
T ss_pred cccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEec-
Confidence 763 445554 578899999999999999999999999999875 366654
Q ss_pred CcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhhc
Q 007985 320 GFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVT---IRKDSTTIIADAASKDEIQARIAQLKKELAET 396 (582)
Q Consensus 320 ~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~ 396 (582)
.++.+|+|||++||+++++ +++++++++||+|+.|+ ++++++++|.+|++
T Consensus 309 ----~~~~dle~ia~~tGa~iv~-----~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------ 361 (527)
T 3p9d_B 309 ----ADFEGVERLALVTGGEVVS-----TFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKA------------------ 361 (527)
T ss_dssp ----CHHHHHHHHHHHTCCCCCS-----TTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSCC------------------
T ss_pred ----CCHHHHHHHHHHhCCEEec-----chhhCCHHHCCCCcEEEEEEecceEEEEEECCCC------------------
Confidence 4677899999999999999 68999999999999998 57899999999875
Q ss_pred cchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhcccc
Q 007985 397 DSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLED 475 (582)
Q Consensus 397 ~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~~~ 475 (582)
+++|||+|||+|+.+++|+||+++||+|++++++++| +|||||++|++++.+|++++.+.++
T Consensus 362 -----------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g 424 (527)
T 3p9d_B 362 -----------------GEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDG 424 (527)
T ss_dssp -----------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCS
T ss_pred -----------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCc
Confidence 3689999999999999999999999999999999999 9999999999999999999876665
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC----CCceeEEccCCcccccccCCccccHHHHHHHHHHHHH
Q 007985 476 ADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAAS 551 (582)
Q Consensus 476 ~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e 551 (582)
. +++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+|
T Consensus 425 ~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e 503 (527)
T 3p9d_B 425 K-KSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASE 503 (527)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHH
Confidence 5 5799999999999999999999999999999999874 5789999999999999999999999999999999999
Q ss_pred HHHHHhchhhhhccCCCCCCCC
Q 007985 552 VAGMVLTTQAIVVEKPKPKTPV 573 (582)
Q Consensus 552 ~a~~lL~id~iI~~~p~~~~~~ 573 (582)
+|++|||||++|..+|+++.++
T Consensus 504 ~a~~iL~id~ii~~~~~~~~~~ 525 (527)
T 3p9d_B 504 AAEVLLRVDNIIRARPRTANRQ 525 (527)
T ss_dssp HHHHHHHCCEEEEEC-------
T ss_pred HHHHHHhHHHHHhcCCcccCCC
Confidence 9999999999999999876543
No 21
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.2e-95 Score=799.70 Aligned_cols=457 Identities=21% Similarity=0.315 Sum_probs=419.2
Q ss_pred hhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhcccc
Q 007985 46 DIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDS 124 (582)
Q Consensus 46 ~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~d~~ 124 (582)
+...|.++|..|+.||..|+++|+|||||+||+|||++ +|+|+|||||+||||+|+++||+ |+|++++|++||++
T Consensus 3 ~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e 78 (515)
T 3iyg_G 3 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPA----AKSMIEISRTQDEE 78 (515)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHH----HHHHHHHHHHhhhh
Confidence 46678999999999999999999999999999999999 99999999999999999999999 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccC--CHHHHHHHHhhhcCC------ch
Q 007985 125 AGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE--GRDDIKAVATISAGN------DD 196 (582)
Q Consensus 125 ~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~~------~~ 196 (582)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++ .+
T Consensus 79 ~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~ 158 (515)
T 3iyg_G 79 VGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSS 158 (515)
T ss_pred hCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHH
Confidence 9999999999999999999999999999999999999999999999999999987 368899999999864 35
Q ss_pred hHHHHHHHHHHHhCCC--C--------cEEE--ecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEec
Q 007985 197 LIGTMIADAIDKVGPD--G--------VLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTD 264 (582)
Q Consensus 197 ~l~~li~~ai~~v~~~--g--------~I~i--~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d 264 (582)
.+++++++|+..+.++ + .|++ .+|++++|| ++++||+|+++|.||. |+++++||||+++|
T Consensus 159 ~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds-~lv~G~v~dk~~~~~~-------m~~~ien~kIll~~ 230 (515)
T 3iyg_G 159 LACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDS-CVLRGVMINKDVTHPR-------MRRYIKNPRIVLLD 230 (515)
T ss_pred HHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccc-eEEeeEEEeCCCCCCC-------CcceeeeeEEEEEc
Confidence 6788999999988622 2 1333 589999999 9999999999999984 67899999999999
Q ss_pred c-------------CcCCHHHHHHHHH-----------HHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCCC
Q 007985 265 Q-------------KISAIKDIIPLLE-----------KTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPG 320 (582)
Q Consensus 265 ~-------------~i~~~~~i~~~le-----------~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~~ 320 (582)
+ .+++++++.++++ ++.+.|++|||++++|++.++++|..++ ++|
T Consensus 231 ~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~------I~a----- 299 (515)
T 3iyg_G 231 SSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRAN------ITA----- 299 (515)
T ss_pred ccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCC------cee-----
Confidence 9 4678888887776 8899999999999999999999998754 344
Q ss_pred cchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcce-eEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhc
Q 007985 321 FGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGT-ARKVTI---RKDSTTIIADAASKDEIQARIAQLKKELAET 396 (582)
Q Consensus 321 ~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~-~~~v~i---~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~ 396 (582)
++++++++|+|||++|||++++ +++++++++||+ |+.|++ ++++++||++|+++
T Consensus 300 v~~~~k~~leria~~tGa~ii~-----~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~----------------- 357 (515)
T 3iyg_G 300 IRRVRKTDNNRIARACGARIVS-----RPEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP----------------- 357 (515)
T ss_pred eccCCHHHHHHHHHHhCCeeec-----cccccChhhcCCcccEEEEEEECCceEEEEeCCCCC-----------------
Confidence 4788999999999999999999 699999999999 999985 46789999999775
Q ss_pred cchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhcccc
Q 007985 397 DSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLED 475 (582)
Q Consensus 397 ~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~~~ 475 (582)
..|||+|||+|+.+++|.||+++||++++|++++++ +|||||++|++++.+|++++.+.++
T Consensus 358 ------------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g 419 (515)
T 3iyg_G 358 ------------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTG 419 (515)
T ss_pred ------------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCc
Confidence 479999999999999999999999999999999765 9999999999999999999877776
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC-----CCceeEEccCCcccccccCCccccHHHHHHHHHHHH
Q 007985 476 ADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS-----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAA 550 (582)
Q Consensus 476 ~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~-----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~ 550 (582)
. +++++++|++||+.||++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|++|+
T Consensus 420 ~-eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~ 498 (515)
T 3iyg_G 420 V-EQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAV 498 (515)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHH
Confidence 6 4699999999999999999999999999999999873 357999999999999999999999999999999999
Q ss_pred HHHHHHhchhhhhccC
Q 007985 551 SVAGMVLTTQAIVVEK 566 (582)
Q Consensus 551 e~a~~lL~id~iI~~~ 566 (582)
|+|++|||||++|...
T Consensus 499 e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 499 ETAVLLLRIDDIVSGH 514 (515)
T ss_pred HHHHHHHHHHheeecC
Confidence 9999999999999754
No 22
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=6.9e-95 Score=798.75 Aligned_cols=458 Identities=20% Similarity=0.289 Sum_probs=416.9
Q ss_pred chhhhch-HHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhc
Q 007985 44 AKDIAFD-QRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT 121 (582)
Q Consensus 44 ~~~~~~g-~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~ 121 (582)
+.+...| +++|..|+.||..|+++|++||||+||||||++ +|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 2 ~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~q 77 (512)
T 3iyg_Q 2 GAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPA----AKMIVMASHMQ 77 (512)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHHh
Confidence 3456678 799999999999999999999999999999999 99999999999999999999999 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhc----ccccCCHHHHHHHHhhhcCC---
Q 007985 122 NDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKR----ARPIEGRDDIKAVATISAGN--- 194 (582)
Q Consensus 122 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~----s~~v~~~~~l~~va~ts~~~--- 194 (582)
|+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++ +++++++++|.++|+||+++
T Consensus 78 d~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~ 157 (512)
T 3iyg_Q 78 EQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQY 157 (512)
T ss_pred hhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999998 56777899999999999976
Q ss_pred --chhHHHHHHHHHHHhCCC-CcEE-------EecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEec
Q 007985 195 --DDLIGTMIADAIDKVGPD-GVLS-------IESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTD 264 (582)
Q Consensus 195 --~~~l~~li~~ai~~v~~~-g~I~-------i~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d 264 (582)
+++|++|+++|+.+++++ +.|. ...|+++.|+ ++++||+|+++|.+ |+..++||+|++++
T Consensus 158 ~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~~ds-~lv~G~~~dk~~~~---------~~~~~~n~kI~ll~ 227 (512)
T 3iyg_Q 158 GNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGVHSS-SVLHGMVFKKETEG---------DVTSVKDAKIAVYS 227 (512)
T ss_pred cchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCcccc-eEEeeEEEecCcCC---------CCcccccCceEEEe
Confidence 789999999999999876 4432 2469999888 99999999999865 35568899999988
Q ss_pred cC-------------cCCHHHHHHH-------HH----HHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCCC
Q 007985 265 QK-------------ISAIKDIIPL-------LE----KTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPG 320 (582)
Q Consensus 265 ~~-------------i~~~~~i~~~-------le----~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~~ 320 (582)
++ |++++++.++ ++ ++.+.|+||||++++|++.++++|..+ +|+||+.|+
T Consensus 228 ~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~------~I~av~~~~ 301 (512)
T 3iyg_Q 228 CPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKY------NIMLVRLNS 301 (512)
T ss_pred cccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHC------CeEEEEeCC
Confidence 76 4667777665 54 888999999999999999999988653 368888765
Q ss_pred cchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEE---ecceEEEEeCCCChHHHHHHHHHHHHHHhhcc
Q 007985 321 FGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDEIQARIAQLKKELAETD 397 (582)
Q Consensus 321 ~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~ 397 (582)
+.+|+|||++|||++++ +++++++++||+|++|++ +++++++|.+|..
T Consensus 302 -----~~dle~ia~~tGa~iis-----~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~------------------- 352 (512)
T 3iyg_Q 302 -----KWDLRRLCKTVGATALP-----RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKE------------------- 352 (512)
T ss_pred -----HHHHHHHHHHhCCEEec-----ccccCCHHHCCcccEEEEEEeCCeEEEEEEcccC-------------------
Confidence 56799999999999999 799999999999999985 4678999998743
Q ss_pred chhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhcccch
Q 007985 398 SVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLEDA 476 (582)
Q Consensus 398 ~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~~~~ 476 (582)
++++|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++.+|++++.+..+.
T Consensus 353 ---------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~ 417 (512)
T 3iyg_Q 353 ---------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGL 417 (512)
T ss_pred ---------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcH
Confidence 25789999999999999999999999999999999999 99999999999999999998777665
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhc----CCCceeEEccCC--cccccccCCccccHHHHHHHHHHHH
Q 007985 477 DERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD----SEWTTGYNAMTD--KYENMLQAGVIDPAKVTRCALQNAA 550 (582)
Q Consensus 477 ~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~----~~~~~G~d~~~g--~i~d~~~~gI~dp~~vk~~~l~~A~ 550 (582)
+++++++|++||+.||++||+|||+|+.+++.+|+. .++++|||+.+| ++.||++.|||||+.||+++|++|+
T Consensus 418 -eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~ 496 (512)
T 3iyg_Q 418 -EQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLAT 496 (512)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHH
Confidence 569999999999999999999999999999999987 367899999965 9999999999999999999999999
Q ss_pred HHHHHHhchhhhhccC
Q 007985 551 SVAGMVLTTQAIVVEK 566 (582)
Q Consensus 551 e~a~~lL~id~iI~~~ 566 (582)
|+|++|||+|++|..+
T Consensus 497 ~~a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 497 NAAVTVLRVDQIIMAK 512 (512)
T ss_pred HHHHHHHhHhHheecC
Confidence 9999999999999753
No 23
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-93 Score=787.92 Aligned_cols=455 Identities=22% Similarity=0.328 Sum_probs=411.1
Q ss_pred hhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhcccc
Q 007985 46 DIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDS 124 (582)
Q Consensus 46 ~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~d~~ 124 (582)
++..|.+++..|+.||..|+++|++||||+||+|||++ +|+|+|||||+||||+|+++||. |+|++++|++||++
T Consensus 4 ~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~----akll~~~a~~qd~e 79 (517)
T 3iyg_Z 4 EVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPT----ASLIAKVATAQDDI 79 (517)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999 99999999999999999999998 99999999999999
Q ss_pred cCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccC-CHHHHHHHHhhhcCC------chh
Q 007985 125 AGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE-GRDDIKAVATISAGN------DDL 197 (582)
Q Consensus 125 ~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~-~~~~l~~va~ts~~~------~~~ 197 (582)
+||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++ .+.
T Consensus 80 ~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~ 159 (517)
T 3iyg_Z 80 TGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADV 159 (517)
T ss_pred hCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHH
Confidence 9999999999999999999999999999999999999999999999999999988 888999999999864 478
Q ss_pred HHHHHHHHHHHhCCCC--------cEEEecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEeccCc--
Q 007985 198 IGTMIADAIDKVGPDG--------VLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKI-- 267 (582)
Q Consensus 198 l~~li~~ai~~v~~~g--------~I~i~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i-- 267 (582)
|++++++|+..+.+.+ .|....|++..|| ++++||+|+++|.||| |+++++||+|+++|+++
T Consensus 160 la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~~ds-~lv~G~v~dk~~~~p~-------m~~~ien~kIll~~~~le~ 231 (517)
T 3iyg_Z 160 LTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSETDT-SLIRGLVLDHGARHPD-------MKKRVEDAYILTCNVSLEY 231 (517)
T ss_pred HHHHHHHHhheeccCCCcCChhHheeeeecCCCcccc-ceEeeEEEeccCCCCC-------ccccccCCeEEEecccccc
Confidence 9999999998885432 1445689999999 9999999999999997 67899999999999975
Q ss_pred -----------CCHHHHH-----------HHHHHHHhcC--------CCEE-EEecCccHHHHHHHHHhhhcCCceEEEe
Q 007985 268 -----------SAIKDII-----------PLLEKTTQLR--------APLL-IIAEDVTGEALATLVVNKLRGILNVAAI 316 (582)
Q Consensus 268 -----------~~~~~i~-----------~~le~i~~~~--------~~lv-ii~~~i~~~al~~L~~n~~~g~~~v~aV 316 (582)
++++++. ..++++...+ +|+| |++++|+++++++|..++ +++|
T Consensus 232 ~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~g------I~~v 305 (517)
T 3iyg_Z 232 EKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEG------IIAL 305 (517)
T ss_pred cccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCC------CEEE
Confidence 3343332 3455555444 4445 556999999999998863 3555
Q ss_pred eCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCC-cceeEEE---EEecceEEEEeCCCChHHHHHHHHHHHHH
Q 007985 317 KAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQ-LGTARKV---TIRKDSTTIIADAASKDEIQARIAQLKKE 392 (582)
Q Consensus 317 k~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~-lG~~~~v---~i~~~~~~~~~~~~~~~~i~~ri~~l~~~ 392 (582)
+ ++++.+|+|||++|||++++ +++++++++ ||+|+ | .+++++++||++|+++
T Consensus 306 ~-----~v~~~~leria~~tGa~iv~-----~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~------------- 361 (517)
T 3iyg_Z 306 R-----RAKRRNMERLTLACGGIALN-----SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNP------------- 361 (517)
T ss_pred E-----ecCHHHHHHHHHHhCCEEec-----chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCc-------------
Confidence 4 45789999999999999999 799999999 99999 9 4689999999999775
Q ss_pred HhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhh
Q 007985 393 LAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKD 471 (582)
Q Consensus 393 l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~ 471 (582)
..|||+|||+|+.+++|.||+++||+|++|+++++| +|||||++|++++.+|++++.
T Consensus 362 ----------------------~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~ 419 (517)
T 3iyg_Z 362 ----------------------RSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKP 419 (517)
T ss_pred ----------------------hhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhc
Confidence 258999999999999999999999999999999999 999999999999999999987
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC----CCceeEEccCCcccccccCCccccHHHHHHHHH
Q 007985 472 KLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQ 547 (582)
Q Consensus 472 ~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~ 547 (582)
+..+. +++++++|++||+.+|++||+|||+|+.+++.+|++. ++++|||+.+|++.||++.|||||+.||+++|+
T Consensus 420 ~~~g~-eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~ 498 (517)
T 3iyg_Z 420 SVKGR-AQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLH 498 (517)
T ss_pred cCCHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHH
Confidence 66655 5799999999999999999999999999999999874 568999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhhhhcc
Q 007985 548 NAASVAGMVLTTQAIVVE 565 (582)
Q Consensus 548 ~A~e~a~~lL~id~iI~~ 565 (582)
+|+|+|++||+||++|..
T Consensus 499 ~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 499 SCTVIATNILLVDEIMRA 516 (517)
T ss_pred HHHHHHHHHHHHHHHhhC
Confidence 999999999999999864
No 24
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.6e-94 Score=803.04 Aligned_cols=466 Identities=18% Similarity=0.280 Sum_probs=409.3
Q ss_pred chhhhch-HHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhc
Q 007985 44 AKDIAFD-QRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKT 121 (582)
Q Consensus 44 ~~~~~~g-~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~ 121 (582)
+.+...| +++|..|+.||..|+++|+|||||+||+|||++ +|+|+|||||+||||+|+++||+ |+|++++|++|
T Consensus 17 ~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~----Akll~e~a~~q 92 (568)
T 3p9d_H 17 GYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPA----VKVLVMATEQQ 92 (568)
T ss_dssp SCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCHH----HHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHH----HHHHHHHHHhh
Confidence 4455566 679999999999999999999999999999999 99999999999999999999999 99999999999
Q ss_pred ccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhccccc----CCHHHHHHHHhhhcC----
Q 007985 122 NDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPI----EGRDDIKAVATISAG---- 193 (582)
Q Consensus 122 d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v----~~~~~l~~va~ts~~---- 193 (582)
|+++||||||+||||++||+++.+++.+|+||..|++||++|++.++++|+++++++ ++++.|.++|+||++
T Consensus 93 d~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~ 172 (568)
T 3p9d_H 93 KIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKY 172 (568)
T ss_dssp HTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTST
T ss_pred hceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCc
Confidence 999999999999999999999999999999999999999999999999999999887 578899999999974
Q ss_pred -CchhHHHHHHHHHHHhCCC-----C-------cEEE--ecCCCccccceeeeeeEEeeecccCCCccCcccCceeec--
Q 007985 194 -NDDLIGTMIADAIDKVGPD-----G-------VLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFE-- 256 (582)
Q Consensus 194 -~~~~l~~li~~ai~~v~~~-----g-------~I~i--~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~-- 256 (582)
++++|++|+++|+.+++++ + .|++ ..|++++|| ++++|++|+++|. +|+++++
T Consensus 173 ~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~ 242 (568)
T 3p9d_H 173 GSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSED 242 (568)
T ss_dssp TCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCC
T ss_pred chHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecC
Confidence 3689999999999999874 3 4555 469999999 9999999999873 3778888
Q ss_pred -CeeEEEeccC-------------cCCHHHHHH-----------HHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCc
Q 007985 257 -NARVLVTDQK-------------ISAIKDIIP-----------LLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGIL 311 (582)
Q Consensus 257 -n~~Ill~d~~-------------i~~~~~i~~-----------~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~ 311 (582)
||||+++|++ +++++++.+ +++++.+.|++|||++++|+++++++|.+++
T Consensus 243 ~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~g----- 317 (568)
T 3p9d_H 243 KKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYG----- 317 (568)
T ss_dssp SSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHT-----
T ss_pred CcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCC-----
Confidence 9999999998 667777654 7889999999999999999999999999875
Q ss_pred eEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEE---ecceEEEEeCCCChHHHHHHHHH
Q 007985 312 NVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTI---RKDSTTIIADAASKDEIQARIAQ 388 (582)
Q Consensus 312 ~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i---~~~~~~~~~~~~~~~~i~~ri~~ 388 (582)
|+||+.| ++.+|+|||++|||++++ +++++++++||+|+.|++ +++++++|++|+.
T Consensus 318 -I~av~~v-----~~~~leria~~tGa~ivs-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~---------- 376 (568)
T 3p9d_H 318 -ILVLKVP-----SKFELRRLCRVCGATPLP-----RLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQG---------- 376 (568)
T ss_dssp -CEEECCC-----CHHHHHHHHHHHSCCCCS-----SSSCCCGGGCEECSCCCCCEETTEECBCCCCCSS----------
T ss_pred -eEEEecC-----CHHHHHHHHHHhCCEEEe-----ccccCCHHHCCcceEEEEEEecCceEEEEecCCC----------
Confidence 5788765 578999999999999999 689999999999999974 5689999999862
Q ss_pred HHHHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHh--cC-cccCcchhHHHHHHh
Q 007985 389 LKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIE--EG-IVPGGGAALVHLSDH 465 (582)
Q Consensus 389 l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~--~g-vVpGGGa~e~~l~~~ 465 (582)
|++++|||+|||+|+.+++|.||++|||++++|++++ ++ +|||||++|++++.+
T Consensus 377 -----------------------l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~ 433 (568)
T 3p9d_H 377 -----------------------EISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISR 433 (568)
T ss_dssp -----------------------SCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHH
T ss_pred -----------------------CCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHH
Confidence 1247899999999999999999999999999999999 65 999999999999999
Q ss_pred hHhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhcC------------CCceeEEccCCc---cccc
Q 007985 466 VPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKDS------------EWTTGYNAMTDK---YENM 530 (582)
Q Consensus 466 L~~~~~~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~~------------~~~~G~d~~~g~---i~d~ 530 (582)
|++++.+..+. +++++++|++||+.||++||+|||+|+.+++.+|+.. ++++|||+.+|+ +.||
T Consensus 434 L~~~a~~~~g~-eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~ 512 (568)
T 3p9d_H 434 ITKYGERTPGL-LQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDI 512 (568)
T ss_dssp HHHHHHTCCST-HHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHH
T ss_pred HHHHhccCCcH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccCh
Confidence 99998877665 5699999999999999999999999999999999874 247899999997 9999
Q ss_pred ccCCccccHHHHHHHHHHHHHHHHHHhchhhhhccCCCCCCCC
Q 007985 531 LQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTPV 573 (582)
Q Consensus 531 ~~~gI~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~p~~~~~~ 573 (582)
++.|||||+.||+++|++|+|+|++|||||++|..+|...+.+
T Consensus 513 ~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~ 555 (568)
T 3p9d_H 513 REENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPRA 555 (568)
T ss_dssp HHHHHHHHHHHHHHHHHCCEECBCCC-----------------
T ss_pred HHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCCC
Confidence 9999999999999999999999999999999999988654433
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=4.6e-94 Score=797.24 Aligned_cols=461 Identities=20% Similarity=0.289 Sum_probs=412.1
Q ss_pred chhhhchHHHHHHHHHHHHHHHHHhhccCCCCCCceeEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhcc
Q 007985 44 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTN 122 (582)
Q Consensus 44 ~~~~~~g~~~~~~~~~~i~~la~~v~stlGP~G~~kmi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~d 122 (582)
..+..+|.+++..|+.||..|+++|++||||+||||||++ +|+|+|||||+||||+|+++||+ |+|++++|++||
T Consensus 9 ~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~----akll~e~a~~qd 84 (546)
T 3p9d_F 9 KAESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPT----AVLIARAAAAQD 84 (546)
T ss_dssp TEEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHH----HHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHH----HHHHHHHHHHHH
Confidence 4567889999999999999999999999999999999999 99999999999999999999999 999999999999
Q ss_pred cccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHHHHHHHHHHHHHHHhhcccccC----CHHHHHHHHhhhcCC----
Q 007985 123 DSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVEELEKRARPIE----GRDDIKAVATISAGN---- 194 (582)
Q Consensus 123 ~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~g~~~a~~~~~~~L~~~s~~v~----~~~~l~~va~ts~~~---- 194 (582)
+++||||||+||||++||+++.+++++|+||+.|++||++|++.++++|+++++|++ +++.|.++|+||+++
T Consensus 85 ~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~ 164 (546)
T 3p9d_F 85 EITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDA 164 (546)
T ss_dssp HHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHH
T ss_pred HHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcch
Confidence 999999999999999999999999999999999999999999999999999999984 678999999999874
Q ss_pred --chhHHHHHHHHHHHhCCC-------CcEEE--ecCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEe
Q 007985 195 --DDLIGTMIADAIDKVGPD-------GVLSI--ESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVT 263 (582)
Q Consensus 195 --~~~l~~li~~ai~~v~~~-------g~I~i--~~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~ 263 (582)
.+.|++++++|+..+.+. ..|.+ ..|++..|| ++++||+|+++|.||+ |+++++||||+++
T Consensus 165 ~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds-~lv~G~v~dk~~~~~~-------m~~~~en~kIll~ 236 (546)
T 3p9d_F 165 DLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDT-TFIKGLVLDHGGRHPD-------MPTRVKNAYVLIL 236 (546)
T ss_dssp HHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTC-CCCSSCEESCCCCSSS-------SCSSBCSCCCCEE
T ss_pred hHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCcccc-EEEeeEEEeccccccc-------CcceecCceEEEe
Confidence 478999999999987521 23444 579999999 9999999999999984 7889999999999
Q ss_pred ccCcC-------------CHHH-----------HHHHHHHHHh---------cCCC-EEEEecCccHHHHHHHHHhhhcC
Q 007985 264 DQKIS-------------AIKD-----------IIPLLEKTTQ---------LRAP-LLIIAEDVTGEALATLVVNKLRG 309 (582)
Q Consensus 264 d~~i~-------------~~~~-----------i~~~le~i~~---------~~~~-lvii~~~i~~~al~~L~~n~~~g 309 (582)
|++++ ++++ +...++.+.. .|+| |||++++|+++|+++|+.|++
T Consensus 237 ~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI-- 314 (546)
T 3p9d_F 237 NVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNI-- 314 (546)
T ss_dssp CCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTC--
T ss_pred cCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCC--
Confidence 98753 2221 1234555554 3455 666678999999999998863
Q ss_pred CceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEE---EecceEEEEeCCCChHHHHHHH
Q 007985 310 ILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVT---IRKDSTTIIADAASKDEIQARI 386 (582)
Q Consensus 310 ~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~---i~~~~~~~~~~~~~~~~i~~ri 386 (582)
++|+ ++++.+|+|||++|||++++ +++++++++||+|+.|+ +++++|+||++|+++
T Consensus 315 ----~~vr-----~v~~~~leria~~tGa~ii~-----~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~------- 373 (546)
T 3p9d_F 315 ----LALR-----RAKRRNMERLQLVTGGEAQN-----SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDP------- 373 (546)
T ss_dssp ----EEEC-----CCCHHHHHHHHHTTTBCCCC-----CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCC-------
T ss_pred ----eeEe-----cCCHHHHHHHHHHhCCEEec-----chhhCCHhHCCcccEEEEEEecCceEEEEecCCCC-------
Confidence 5554 56788999999999999999 79999999999999994 688999999999875
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHHHHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHh
Q 007985 387 AQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDH 465 (582)
Q Consensus 387 ~~l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~ 465 (582)
..|||+|||+|+.+++|+||+++||+|++|+++++| +|||||++|++++.+
T Consensus 374 ----------------------------~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~ 425 (546)
T 3p9d_F 374 ----------------------------KSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRY 425 (546)
T ss_dssp ----------------------------SCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHH
T ss_pred ----------------------------ceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHH
Confidence 469999999999999999999999999999999999 999999999999999
Q ss_pred hHh---hhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHhhc---------CCCceeEEccCCcccccccC
Q 007985 466 VPA---IKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEKVKD---------SEWTTGYNAMTDKYENMLQA 533 (582)
Q Consensus 466 L~~---~~~~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~l~~---------~~~~~G~d~~~g~i~d~~~~ 533 (582)
|++ ++.+..+. +++++++|++||+.||++||+|||+|+.+++.+|++ .++++|||+.+|++.||++.
T Consensus 426 L~~~~~~~~~~~g~-eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~ 504 (546)
T 3p9d_F 426 LRSANMNKLGAKGK-TKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIE 504 (546)
T ss_dssp HHHHHTTTTTTTSH-HHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGG
T ss_pred HHhhhhhhhcCchH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhc
Confidence 998 46666555 579999999999999999999999999999999975 34679999999999999999
Q ss_pred CccccHHHHHHHHHHHHHHHHHHhchhhhhccCCC
Q 007985 534 GVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 568 (582)
Q Consensus 534 gI~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~p~ 568 (582)
|||||+.||+++|++|+|+|++|||||++|..+|.
T Consensus 505 gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~ 539 (546)
T 3p9d_F 505 GIWDSYRVLRNAITGATGIASNLLLCDELLRAGRS 539 (546)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCS
T ss_pred cCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999987754
No 26
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=2.2e-88 Score=744.43 Aligned_cols=429 Identities=22% Similarity=0.336 Sum_probs=342.9
Q ss_pred eEec-CCCeEEecChHHHhhhcccCCcchhhHHHHHHHHHhhcccccCCCcchHHHHHHHHHHHHHhhhhCCCChHHHHH
Q 007985 80 VLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKR 158 (582)
Q Consensus 80 mi~~-~g~~~iTnDG~tIlk~i~l~hP~~~~ga~Ll~e~a~~~d~~~GDGTTt~vvLa~~Ll~~~~~li~~g~~p~~I~~ 158 (582)
||++ +|+|+|||||+||||+|+++||. |+|++++|++||+++||||||+||||++||+++.+++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~----Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPA----AKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHH----HHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6778 99999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccccC--CHHHHHHHHhhhcC------CchhHHHHHHHHHHHhCCC--Cc--------EEEe--
Q 007985 159 GIDKTVHGLVEELEKRARPIE--GRDDIKAVATISAG------NDDLIGTMIADAIDKVGPD--GV--------LSIE-- 218 (582)
Q Consensus 159 g~~~a~~~~~~~L~~~s~~v~--~~~~l~~va~ts~~------~~~~l~~li~~ai~~v~~~--g~--------I~i~-- 218 (582)
||++|++.++++|+++++|++ ++++|.++|+|+++ ++++|++++++|+.+++++ |. |+++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 999999999999999999986 48899999998854 5789999999999999765 43 5554
Q ss_pred cCCCccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEeccC-------------cCCHHHH-----------H
Q 007985 219 SSSSFETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQK-------------ISAIKDI-----------I 274 (582)
Q Consensus 219 ~G~~~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~-------------i~~~~~i-----------~ 274 (582)
+|++++|| ++++||+|+++|.|||| +++++||||+++|++ +++++++ .
T Consensus 157 ~G~~~~ds-~lv~G~v~dk~~~~~~m-------~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~ 228 (500)
T 3aq1_B 157 AGGSIDDS-ELIDGLVIDKERSHPNM-------PEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMR 228 (500)
T ss_dssp ESSCGGGC-EEESEEEESCCCSSTTS-------CSEEEEEEEEEESSCBCC-------------------------CHHH
T ss_pred cCCCccce-EEEeeeEEeecCCCCCC-------cccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHH
Confidence 89999998 99999999999999985 568999999999998 6666665 7
Q ss_pred HHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCc
Q 007985 275 PLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSV 354 (582)
Q Consensus 275 ~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~ 354 (582)
++++++.+.|+||||++++|+++|+++|+.|+ ++|| +++++++|+|||++|||++++ +++++++
T Consensus 229 ~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av-----~~~~k~~le~ia~~tGa~iis-----~l~~~~~ 292 (500)
T 3aq1_B 229 EMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAV-----RRVKKSDLKRLSKVTGATIIQ-----DLDQITT 292 (500)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEE-----CSCCHHHHHHHHHHHCCCCBS-----CTTCCCS
T ss_pred HHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEE-----EeCCHHHHHHHHHHhCCeEec-----ccccCCH
Confidence 99999999999999999999999999999976 4666 577999999999999999999 7999999
Q ss_pred CCcceeEEEEEe---cceEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHHHHHH
Q 007985 355 EQLGTARKVTIR---KDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELED 431 (582)
Q Consensus 355 ~~lG~~~~v~i~---~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~~l~E 431 (582)
++||+|+.|++. +++|++|++|+++ ++|||+|||+|+.+++|
T Consensus 293 ~~LG~a~~v~~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E 337 (500)
T 3aq1_B 293 EDVGTAGLVEEKEVRGGKMTYVTGCQNS-----------------------------------KAVTVLLHGGTEHVVDS 337 (500)
T ss_dssp TTCEEEEEEEEEECSSSEEEEEEEETTC-----------------------------------CCEEEEEEESSHHHHHH
T ss_pred hHCCCceEEEEEEecCeEEEEEECCCCC-----------------------------------ceEEEEecCCcHHHHHH
Confidence 999999999974 8999999998753 68999999999999999
Q ss_pred HHhhHHhHHHHHHHHHhcC-cccCcchhHHHHHHhhHhhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 007985 432 RKLRIEDAKNATFAAIEEG-IVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAGVEGEVVVEK 510 (582)
Q Consensus 432 ~~~~l~DAl~~~~~al~~g-vVpGGGa~e~~l~~~L~~~~~~~~~~~~~~~~~~~a~AL~~i~~~L~~NaG~d~~~vi~~ 510 (582)
+||+++||++++++++++| +|||||++|++++.+|++++.+.++. +++++++|++||+.||++||+|||+|+.+++.+
T Consensus 338 ~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~-~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~ 416 (500)
T 3aq1_B 338 LDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGR-EQLAVSKFAEALEVIPVALAENAGLDPIDIMVE 416 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSH-HHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCch-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 9999999999999999999 99999999999999999998776665 579999999999999999999999999999999
Q ss_pred hhcC----CCceeEEccCCcccccccCCccccHHHHHHHHHHHHHHHHHHhchhhhhccCCCCCCC
Q 007985 511 VKDS----EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKTP 572 (582)
Q Consensus 511 l~~~----~~~~G~d~~~g~i~d~~~~gI~dp~~vk~~~l~~A~e~a~~lL~id~iI~~~p~~~~~ 572 (582)
|++. +.++|||+.+|++.||++.|||||+.||+++|++|+|+|++|||||++|..+|+++++
T Consensus 417 l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~~~ 482 (500)
T 3aq1_B 417 LRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSANQG 482 (500)
T ss_dssp HHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC-------------
T ss_pred HHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCC
Confidence 9863 3589999999999999999999999999999999999999999999999998876543
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3e-48 Score=363.98 Aligned_cols=193 Identities=46% Similarity=0.758 Sum_probs=189.7
Q ss_pred ceeeeeeEEeeecccCCCccCcccCceeecCeeEEEeccCcCCHHHHHHHHHHHHhcCCCEEEEecCccHHHHHHHHHhh
Q 007985 227 VEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNK 306 (582)
Q Consensus 227 ~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~ 306 (582)
+++++||.||+||+||||+|++++|..+++||+||++|.+|+++++++|+||.+.+.++||+|++++|+++||++|+.|+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEEecceEEEEeCCCChHHHHHHH
Q 007985 307 LRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARI 386 (582)
Q Consensus 307 ~~g~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~ri 386 (582)
++|.++|+|||+|+||+.++..|+|||++|||+++++++|+++++++.++||+|++|.+++++|+++.|.++++.+++|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccchhhHHHHHHHHHHhcCCeEEE
Q 007985 387 AQLKKELAETDSVYDSEKLAERIAKLSGGVAVI 419 (582)
Q Consensus 387 ~~l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI 419 (582)
+||+.+++.++|+|+||+|+||+|||+||+|+|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999999864
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=7.1e-47 Score=355.28 Aligned_cols=190 Identities=52% Similarity=0.857 Sum_probs=185.9
Q ss_pred eeeeeEEeeecccCCCccCcccCceeecCeeEEEeccCcCCHHHHHHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhc
Q 007985 229 VEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLR 308 (582)
Q Consensus 229 ~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~ 308 (582)
=.+||.||+||+||||+|++++|..+++||+||++|.+|+++++++|+||.+.+.++||+|++++|+++||++|+.|+++
T Consensus 11 ~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklr 90 (201)
T 3osx_A 11 GSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMR 90 (201)
T ss_dssp -CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHH
T ss_pred CccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhcc
Confidence 35799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEEecceEEEEeCCCChHHHHHHHHH
Q 007985 309 GILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQ 388 (582)
Q Consensus 309 g~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~~~~~~~i~~ri~~ 388 (582)
|.++|+|||+|+||+.++..|+|||++|||++++++.|+++++++.++||+|++|.+++++|+++.|.+++++|++||+|
T Consensus 91 g~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~q 170 (201)
T 3osx_A 91 GIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQ 170 (201)
T ss_dssp TSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccchhhHHHHHHHHHHhcCCeEE
Q 007985 389 LKKELAETDSVYDSEKLAERIAKLSGGVAV 418 (582)
Q Consensus 389 l~~~l~~~~~~~~~~~l~~ri~~l~g~~~t 418 (582)
|+.+++.++|+||||+|+||+|||+||+|+
T Consensus 171 Ir~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 171 IRQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 999999999999999999999999999874
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=4.3e-36 Score=269.32 Aligned_cols=144 Identities=55% Similarity=0.902 Sum_probs=141.9
Q ss_pred eeEEeeecccCCCccCcccCceeecCeeEEEeccCcCCHHHHHHHHHHHHhcCCCEEEEecCccHHHHHHHHHhhhcCCc
Q 007985 232 GMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGIL 311 (582)
Q Consensus 232 G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~le~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~ 311 (582)
||.|||||+||||+|++++|..+++||+||++|++|+++++++|+||++.+.++||+|++++++++||++|+.|+++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEEEecceEEEEeC
Q 007985 312 NVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIAD 375 (582)
Q Consensus 312 ~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~i~~~~~~~~~~ 375 (582)
+++|||+|+||+.+++.|+|||++|||++++++.|+++++++.++||+|++|.+++++|+++.|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999999999999999999999999999999999999876
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.85 E-value=6e-21 Score=181.69 Aligned_cols=146 Identities=24% Similarity=0.309 Sum_probs=120.6
Q ss_pred ccccceeeeeeEEeeecccCCCccCcccCceeecCeeEEEeccCcC-------------CHHH-----------HHHHHH
Q 007985 223 FETTVEVEEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKIS-------------AIKD-----------IIPLLE 278 (582)
Q Consensus 223 ~~ds~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~-------------~~~~-----------i~~~le 278 (582)
++|| ++++|++|++++.+| +||++++||||++++++++ ++++ +...++
T Consensus 1 ~~dS-~lv~Gvvl~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~ 72 (178)
T 1gml_A 1 MEDS-CVLRGVMINKDVTHP-------RMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCE 72 (178)
T ss_dssp --CC-SEEEEEEESCCCSST-------TSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHH
T ss_pred CCCc-EEEEEEEEeccccCC-------CCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHH
Confidence 3688 899999999998876 4788999999999999753 2222 346788
Q ss_pred HHHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcc
Q 007985 279 KTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLG 358 (582)
Q Consensus 279 ~i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG 358 (582)
++.+.|+++||++++|++.|+++|.++++ +|| +++++++|++||++|||++++ ++++++++.||
T Consensus 73 kI~~~g~nVVl~~k~I~d~a~~~l~k~gI------~~v-----r~v~~~dleria~atGa~iv~-----~~~~l~~~~LG 136 (178)
T 1gml_A 73 DIIQLKPDVVITEKGISDLAQHYLMRANV------TAI-----RRVRKTDNNRIARACGARIVS-----RPEELREDDVG 136 (178)
T ss_dssp HHHTTCCSEEEESSCBCHHHHHHHHHTTC------EEE-----CCCCHHHHHHHHHHHCCCEES-----CGGGCCGGGSB
T ss_pred HHhhcCCcEEEECCcccHHHHHHHHHCCC------EEE-----ecCCHHHHHHHHHHhCCeEeC-----ChhhCChhhhC
Confidence 99999999999999999999999998753 554 577999999999999999999 79999999999
Q ss_pred e-eEEEE---EecceEEEEeCCCChHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEEcCCCHH
Q 007985 359 T-ARKVT---IRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATET 427 (582)
Q Consensus 359 ~-~~~v~---i~~~~~~~~~~~~~~~~i~~ri~~l~~~l~~~~~~~~~~~l~~ri~~l~g~~~tI~v~G~t~~ 427 (582)
+ |+.|+ ++++++++|+||.++ ..|||+|||+|..
T Consensus 137 ~~~~~v~~~~ig~~~~~~~~gc~~~-----------------------------------~~~TIllRG~~~~ 174 (178)
T 1gml_A 137 TGAGLLEIKKIGDEYFTFITDCKDP-----------------------------------KACTILLRGASHH 174 (178)
T ss_dssp CCEEEEEEEEETTEEEEEEEEESST-----------------------------------TSCEEEEEC----
T ss_pred CcccEEEEEEECCeEEEEEECCCCC-----------------------------------CEEEEEEECCCcc
Confidence 9 99998 468899999999764 4799999999864
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.74 E-value=1.2e-17 Score=155.84 Aligned_cols=127 Identities=20% Similarity=0.295 Sum_probs=108.7
Q ss_pred eeeeEEeeecccCCCccCcccCceeecCeeEEEeccCcC-------------CHHH-----------HHHHHHHHHhcCC
Q 007985 230 EEGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKIS-------------AIKD-----------IIPLLEKTTQLRA 285 (582)
Q Consensus 230 ~~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~-------------~~~~-----------i~~~le~i~~~~~ 285 (582)
++|++|++++.+| +|+++++||||+++|++++ ++++ +...++++.++|+
T Consensus 1 i~Gvv~~k~~~~~-------~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHS-------KMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCT-------TSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCC-------CCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 4799999998886 4788999999999999853 3333 3467889999999
Q ss_pred CEEEEecCccHHHHHHHHHhhhcCCceEEEeeCCCcchhhhHHHHHHHHHhCCeEeccccCCcccCCCcCCcceeEEEE-
Q 007985 286 PLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVT- 364 (582)
Q Consensus 286 ~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~~~~~~~~~~~l~~ia~~tG~~iis~~~~~~~~~~~~~~lG~~~~v~- 364 (582)
++||++++|++.|+++|.++++ +|| +++++++|++||++|||++++ ++++++++.||+|+.|+
T Consensus 74 nVVl~~k~I~d~a~~~l~k~gI------~~v-----~~v~~~dleria~atGa~iv~-----~~~~l~~~~LG~~~~v~e 137 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEGI------YAV-----RRVKKSDMEKLAKATGAKIVT-----DLDDLTPSVLGEAETVEE 137 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTTC------EEE-----CSCCHHHHHHHHHHHTCCCBS-----STTSCCTTSCEEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCCC------EEE-----ccCCHHHHHHHHHHhCCeeeC-----ccccCCcccCccceEEEE
Confidence 9999999999999999998753 554 577999999999999999999 79999999999999998
Q ss_pred --EecceEEEEeCCCCh
Q 007985 365 --IRKDSTTIIADAASK 379 (582)
Q Consensus 365 --i~~~~~~~~~~~~~~ 379 (582)
++++++++|++|.+.
T Consensus 138 ~~ig~~~~~~~~g~~~~ 154 (159)
T 1ass_A 138 RKIGDDRMTFVMGCKNH 154 (159)
T ss_dssp EEETTEEEEEEESCC--
T ss_pred EEECCeEEEEEECCCCc
Confidence 468899999999874
No 32
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=28.69 E-value=2.6e+02 Score=25.04 Aligned_cols=86 Identities=14% Similarity=0.190 Sum_probs=60.6
Q ss_pred eecCeeEEEeccC------c--------CCHHHHHHHHHH-HHhcCCCEEEEecCccHHHHHHHHHhhhcCCceEEEeeC
Q 007985 254 EFENARVLVTDQK------I--------SAIKDIIPLLEK-TTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKA 318 (582)
Q Consensus 254 ~~~n~~Ill~d~~------i--------~~~~~i~~~le~-i~~~~~~lvii~~~i~~~al~~L~~n~~~g~~~v~aVk~ 318 (582)
.+.+.+|+++++| . .+.+++...|+. ..+.|..+-+.+.+..++.++.+-...- ...-++|.+
T Consensus 3 ~~~~m~IlvlNGPNLNlLG~REP~iYG~~Tl~di~~~l~~~a~~~g~~v~~~QSN~EGeLId~Ih~a~~--~~dgiIINp 80 (156)
T 1gtz_A 3 SLANAPIMILNGPNLNLLGQAQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEARL--NHCGIVINP 80 (156)
T ss_dssp CTTTSCEEEEECTTGGGTTTSCHHHHCSCCHHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHHHHHHHH--HCSEEEEEC
T ss_pred CccCceEEEEeCCCccccCCCCCCcCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCCHHHHHHHHHHhhh--cCcEEEECc
Confidence 3456679999997 1 345566666654 4567899999999999999998876542 245578888
Q ss_pred CCcchhhhHHHHHHHHHhCCeEe
Q 007985 319 PGFGERRKALLQDIAIVTGAEFQ 341 (582)
Q Consensus 319 ~~~~~~~~~~l~~ia~~tG~~ii 341 (582)
-+|-+.+-...+-|+.+.+..++
T Consensus 81 gA~THtSvAlrDAl~~v~~~P~V 103 (156)
T 1gtz_A 81 AAYSHTSVAILDALNTCDGLPVV 103 (156)
T ss_dssp TTHHHHCHHHHHHHHTSTTCCEE
T ss_pred hhhccccHHHHHHHHhcCCCCEE
Confidence 77777776666666655446666
Done!