Query 007986
Match_columns 582
No_of_seqs 200 out of 448
Neff 4.8
Searched_HMMs 46136
Date Thu Mar 28 17:58:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007986.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007986hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12899 Glyco_hydro_100: Alka 100.0 3E-117 6E-122 928.8 27.4 377 194-577 1-377 (436)
2 PLN02703 beta-fructofuranosida 100.0 3E-115 7E-120 933.2 31.9 397 179-577 120-518 (618)
3 PLN02973 beta-fructofuranosida 100.0 3E-114 7E-119 921.0 29.7 388 184-577 99-486 (571)
4 PLN03005 beta-fructofuranosida 100.0 8E-114 2E-118 917.1 30.0 388 185-577 78-465 (550)
5 TIGR01561 gde_arch glycogen de 100.0 5.2E-54 1.1E-58 474.5 25.6 277 208-575 278-575 (575)
6 PF06202 GDE_C: Amylo-alpha-1, 100.0 2.7E-52 5.9E-57 440.0 26.0 280 210-578 16-314 (370)
7 TIGR01531 glyc_debranch glycog 100.0 2.2E-44 4.8E-49 419.6 21.5 295 213-577 1022-1397(1464)
8 COG3408 GDB1 Glycogen debranch 100.0 2.4E-39 5.2E-44 362.0 26.2 293 190-578 249-552 (641)
9 PRK10137 alpha-glucosidase; Pr 99.9 1.7E-21 3.7E-26 221.5 27.2 322 185-578 303-727 (786)
10 KOG3625 Alpha amylase [Carbohy 99.9 1.6E-22 3.4E-27 226.3 15.5 293 224-578 1076-1450(1521)
11 TIGR01577 oligosac_amyl oligos 99.7 9.4E-15 2E-19 164.1 27.0 203 190-434 256-461 (616)
12 PF05592 Bac_rhamnosid: Bacter 99.4 4.6E-12 1E-16 138.5 13.6 175 225-435 143-323 (509)
13 PRK13271 treA trehalase; Provi 99.2 5.9E-10 1.3E-14 124.7 21.8 256 224-577 154-471 (569)
14 PF04685 DUF608: Protein of un 99.2 4E-11 8.8E-16 127.7 10.6 199 310-570 95-305 (365)
15 PLN02567 alpha,alpha-trehalase 99.0 2E-08 4.3E-13 112.5 22.1 272 224-578 147-477 (554)
16 COG3459 Cellobiose phosphoryla 99.0 6.5E-09 1.4E-13 119.8 18.2 261 230-563 611-901 (1056)
17 PF01204 Trehalase: Trehalase; 98.9 1E-07 2.3E-12 105.9 19.2 259 225-577 124-445 (512)
18 PRK13272 treA trehalase; Provi 98.8 3.2E-07 6.9E-12 102.5 21.3 253 224-577 155-471 (542)
19 COG3387 SGA1 Glucoamylase and 98.8 5.8E-07 1.3E-11 102.0 23.6 211 191-433 245-463 (612)
20 PRK13270 treF trehalase; Provi 98.7 2.8E-06 6E-11 95.3 23.4 250 225-577 167-480 (549)
21 TIGR01535 glucan_glucosid gluc 98.6 2.5E-05 5.3E-10 89.5 27.0 197 186-434 247-450 (648)
22 PF03200 Glyco_hydro_63: Manno 98.1 5.5E-05 1.2E-09 88.5 14.9 171 383-578 558-734 (801)
23 COG1626 TreA Neutral trehalase 97.7 0.0027 5.9E-08 70.9 18.8 135 381-577 352-486 (558)
24 PF00723 Glyco_hydro_15: Glyco 97.4 0.018 3.9E-07 63.0 21.5 184 211-427 23-225 (448)
25 PF06824 DUF1237: Protein of u 97.3 0.0023 4.9E-08 70.1 11.9 224 208-450 30-296 (424)
26 COG4354 Predicted bile acid be 97.0 0.029 6.3E-07 63.3 17.8 80 319-405 447-531 (721)
27 KOG0602 Neutral trehalase [Car 96.4 0.17 3.7E-06 57.8 18.3 184 215-436 171-407 (600)
28 COG3538 Uncharacterized conser 95.0 1.7 3.7E-05 47.3 17.9 207 229-450 60-294 (434)
29 KOG2161 Glucosidase I [Carbohy 94.9 0.46 1E-05 55.3 14.1 183 365-575 580-776 (849)
30 KOG2119 Predicted bile acid be 87.1 0.69 1.5E-05 53.8 4.4 97 327-433 570-671 (879)
31 PF03632 Glyco_hydro_65m: Glyc 83.1 6 0.00013 43.2 9.2 86 316-405 107-196 (370)
32 TIGR01507 hopene_cyclase squal 37.6 2.6E+02 0.0056 32.9 11.0 125 187-351 284-415 (635)
33 cd00249 AGE AGE domain; N-acyl 36.4 2.4E+02 0.0051 29.8 9.8 98 316-431 55-152 (384)
34 cd02892 SQCY_1 Squalene cyclas 36.4 3.3E+02 0.0072 31.8 11.7 133 187-351 275-412 (634)
35 PF06051 DUF928: Domain of Unk 24.9 78 0.0017 31.4 3.5 31 385-417 143-173 (189)
36 TIGR01507 hopene_cyclase squal 22.3 9.4E+02 0.02 28.4 12.1 72 187-264 333-418 (635)
No 1
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases. This is a unique enzyme that hydrolyses core 1-type O-glycan from glycoproteins. The proteins are produced in the gut-flora bacteria from Actinobacteria and Firmicutes [].; GO: 0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
Probab=100.00 E-value=2.7e-117 Score=928.79 Aligned_cols=377 Identities=70% Similarity=1.281 Sum_probs=368.5
Q ss_pred HHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCC
Q 007986 194 EAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSP 273 (582)
Q Consensus 194 ~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~ 273 (582)
+||++|++++|+|+++|+||+||.|++..+++||++||.||+++|++++|+.|++|+|||||..+++||++++++|+|++
T Consensus 1 ~a~~~l~~s~v~~~g~pvGtvAa~d~~~~~~lNY~qvF~RDfvps~l~fL~~g~~eIVrnFL~~tl~Lq~~~~~~d~~~~ 80 (436)
T PF12899_consen 1 EAWELLERSIVYYQGQPVGTVAALDPSAEEALNYDQVFVRDFVPSALAFLMKGEPEIVRNFLLETLQLQSWEKQVDCFKP 80 (436)
T ss_pred ChHHHHhhheEeeCCceeeeeeecCCcccccccccceEeecChHHHHHHHHcCCHHHHHHHHHHHHhhhhhhhhcccccc
Confidence 59999999999999999999999999777899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhh
Q 007986 274 GQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCL 353 (582)
Q Consensus 274 ~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l 353 (582)
++|+||+||||.|++ +++++.||||+.+|||+.+|||+|||||+|++|.++|||.+|.++|++|++|++||+.|+
T Consensus 81 g~G~mPaSFkv~~~~-----~~e~l~aDfGe~AIgRv~pVDs~~WWiillraY~k~tgD~s~~~~~~~Q~gi~liL~lcL 155 (436)
T PF12899_consen 81 GRGVMPASFKVLHEN-----EEETLIADFGERAIGRVAPVDSGLWWIILLRAYVKATGDYSLAESPEVQRGIRLILDLCL 155 (436)
T ss_pred CCCcccceEEEecCC-----CCceEecCcchhhhccccCcccccHHHHHHHHHHHHhcchhhhhcHHHHHHHHHHHHHHc
Confidence 999999999999743 788999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcc
Q 007986 354 ADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVD 433 (582)
Q Consensus 354 ~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld 433 (582)
+++||++|+|+||||++|+|||||++|||+|||||+|+||||+.+|+...++ .+++.+++.+|+.+|++|++++||+|
T Consensus 156 ~~~Fd~~PtLlvpDg~~MiDRrMgv~G~PlEiQ~Lf~~aLr~a~~ll~~~~~--~~~~~~~i~~rl~~L~~h~r~~yWld 233 (436)
T PF12899_consen 156 ADGFDMFPTLLVPDGACMIDRRMGVYGHPLEIQALFYMALRCARELLKPDEE--GKDLIERIDKRLHALSFHIREYYWLD 233 (436)
T ss_pred ccccCCCceEEecCCceeecccccccCCcchHHHHHHHHHHHHHHhcCcccc--hhHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999999987644 57899999999999999999999999
Q ss_pred hhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHHHHHHH
Q 007986 434 MKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESI 513 (582)
Q Consensus 434 ~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~I 513 (582)
.++||+||||+||||+++|+|||||+|++||+||+|||+++|||++||++|++||||||++||+||+++||+|++|+++|
T Consensus 234 ~~~ln~iyr~~teey~~~a~N~fNi~p~~ip~wl~dwlp~~gGY~ignv~P~~~dfRff~lGNlLAiLsgLat~~qa~~I 313 (436)
T PF12899_consen 234 LKRLNEIYRYKTEEYGHTAVNKFNIYPDSIPDWLFDWLPEKGGYFIGNVSPARMDFRFFSLGNLLAILSGLATPEQAEAI 313 (436)
T ss_pred HHHHHHHHhccHhhhhhhhhhcccCCcccchHHHHHhcccCCceeEeeccccccceeehhhhhHHHHHhcCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHH
Q 007986 514 LNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTY 577 (582)
Q Consensus 514 ld~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~ 577 (582)
+++|+++|++|.++||||+|+|||++++||++|++||+|+||||||||+||+|+|+|++|++|.
T Consensus 314 ~~lIe~~~~~L~g~mPlki~yPale~~eWri~tg~dpKN~PwsYHNGG~WP~LlW~~~aA~ik~ 377 (436)
T PF12899_consen 314 MDLIEERWEDLVGPMPLKICYPALEGEEWRIYTGCDPKNTPWSYHNGGSWPVLLWFLTAALIKM 377 (436)
T ss_pred HHHHHHHHhhhccccchhhccCCCCCCCCccccCcCcCccccccccCCCcHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999999984
No 2
>PLN02703 beta-fructofuranosidase
Probab=100.00 E-value=3.1e-115 Score=933.23 Aligned_cols=397 Identities=76% Similarity=1.321 Sum_probs=383.9
Q ss_pred ccCccCCCcchHHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHH
Q 007986 179 LEGVRTKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHT 258 (582)
Q Consensus 179 ~~~~~~~~~~~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~l 258 (582)
++|...+.+.++|+++||++||+++|+||++|+||+||.++...++.||++||+||++||++++|+.|++|++|+||.++
T Consensus 120 ~~~~~~~~~~~~~~~eA~elL~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~t 199 (618)
T PLN02703 120 SNGNAQSVGTKSIEDEAWDLLRQSVVFYCGSPIGTIAANDPSSTSVLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILYT 199 (618)
T ss_pred CCCcccccCCChHHHHHHHHHHHhhhhhcCccceeEeccCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHH
Confidence 45555788899999999999999999999999999999987544679999999999999999999999999999999999
Q ss_pred HhhhhhhhhcccCCCCCCCCCCceeeccccCCCc--cccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHH
Q 007986 259 LQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESN--KFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQ 336 (582)
Q Consensus 259 a~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~--~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl 336 (582)
++||++|+++|+|++++|+||++|||.|+++|.+ .+|++++||||+++|+|+++|||+|||||+|++|.+.|||.+|+
T Consensus 200 L~lq~~ektld~~q~g~G~mPaSfkv~~~~~~~~~~~~ee~l~aDfGe~AIgRV~pVDS~LWWIIllraY~k~TgD~sf~ 279 (618)
T PLN02703 200 LQLQSWEKTMDCHSPGQGLMPCSFKVKTVPLDGDDSMTEEVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCTGDLSVQ 279 (618)
T ss_pred HhhhhhHHHHHhccCCCCCcCceeeecccccccccccccccccCCcCccceeeeccccchhHHHHHHHHHHHhhccHHHh
Confidence 9999999999999999999999999999988876 37889999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHH
Q 007986 337 ERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAIN 416 (582)
Q Consensus 337 ~~p~vq~~L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~ 416 (582)
++|++|++|++||++|++++||++|+|+||||++|||+|||++|||+|||||||+||||+.+|+...++ .+++++++.
T Consensus 280 e~~~~Q~gI~liL~LcLa~~Fd~fPtLlVpDgs~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~--~~e~i~~i~ 357 (618)
T PLN02703 280 ERVDVQTGIKMILKLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDG--SVDLIRALN 357 (618)
T ss_pred hhhhHHHHHHHHHHHHccCcCCCCceEeccCCCchhccccCcCCccHHHHHHHHHHHHHHHHhcCccch--HHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999998877654 689999999
Q ss_pred HHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccc
Q 007986 417 NRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGN 496 (582)
Q Consensus 417 ~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGN 496 (582)
.|+.+|+++++++||+|.+++|+||||+||+|+++|+|+|||||++||+||.|||+++||||+|||+|++||||||++||
T Consensus 358 ~rl~~L~~hir~~yWld~~~ln~iyRykteey~~~A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfRffsLGN 437 (618)
T PLN02703 358 NRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYDAVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGN 437 (618)
T ss_pred hhhhhhHHHHHHHHhhcHHHhhHHHhhhhhhcchhhhhhcccCCCCcchHhhhhccccCceeeeeecccccccchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHH
Q 007986 497 LWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVT 576 (582)
Q Consensus 497 lLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk 576 (582)
+||++++|++++|+++||++|+++|++|++.||||+|+|||++++||++|++||||.||||||||+||+|+|+|++||+|
T Consensus 438 lLAILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkIcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~~aA~iK 517 (618)
T PLN02703 438 LWSIVSSLATNDQSHAILDLIEAKWAELVADMPLKICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIK 517 (618)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCccccccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred H
Q 007986 577 Y 577 (582)
Q Consensus 577 ~ 577 (582)
.
T Consensus 518 ~ 518 (618)
T PLN02703 518 M 518 (618)
T ss_pred c
Confidence 5
No 3
>PLN02973 beta-fructofuranosidase
Probab=100.00 E-value=3.4e-114 Score=921.00 Aligned_cols=388 Identities=58% Similarity=1.099 Sum_probs=376.8
Q ss_pred CCCcchHHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhh
Q 007986 184 TKREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQS 263 (582)
Q Consensus 184 ~~~~~~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs 263 (582)
.+++.++|+++||++|++++|+|||+|+||+||.|++ +++.||++||+||++||++++|+.|++|++|+||..+++||+
T Consensus 99 ~~~~~~~~~~~aw~~l~~s~v~~~g~pvgtvAa~d~~-~~~lNY~qVFiRDfVpsaLafLl~Ge~eIVrnFl~~TL~lq~ 177 (571)
T PLN02973 99 PGFESHPMVGEAWDALRRSMVYFRGQPVGTIAAVDNS-EEKLNYDQVFVRDFVPSALAFLMNGEPDIVKNFLLKTLRLQS 177 (571)
T ss_pred ccCCCCcHHHHHHHHHHhheEEECCeeeeeeeccCCc-cccccCcchhhhccHHHHHHHHHCCCHHHHHHHHHHHHhhhh
Confidence 4678899999999999999999999999999999874 478999999999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHH
Q 007986 264 WEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQT 343 (582)
Q Consensus 264 ~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~ 343 (582)
+|+++|+|++++|+||++|||.|++++ +|+++.+|||+.+||++.+|||+|||||+|++|.+.|||.+|++.|++|+
T Consensus 178 ~ektld~~q~g~G~mPaSfkv~~~p~~---~~e~l~aDfG~~aIGRV~pVDS~LWWIIllraY~k~TgD~s~~e~pevQr 254 (571)
T PLN02973 178 WEKKIDRFQLGEGVMPASFKVFHDPVR---NHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLADMPECQK 254 (571)
T ss_pred hHHHHHhcccCCCCcCceeeecccccC---ccccccccccccccccccccchhhHHHHHHHHHHHhccchhhhhcHHHHH
Confidence 999999999999999999999997655 67889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Q 007986 344 GIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALS 423 (582)
Q Consensus 344 ~L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk 423 (582)
+|++|++.|++++||++|+|+||||++|+|+|||++|||+|||||||+||||+.+|+...++ .+++++++.+|+.+|+
T Consensus 255 gi~lil~lcL~~~Fd~~ptLlVpDgs~miDrrMgv~G~pLeiQaLfy~ALR~a~~~L~~~~~--~~~~i~~i~~rl~~L~ 332 (571)
T PLN02973 255 GIRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALLLLKHDGE--GKEMVEQIVKRLHALS 332 (571)
T ss_pred HHHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccch--hHHHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998877644 6899999999999999
Q ss_pred HHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcC
Q 007986 424 FHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSS 503 (582)
Q Consensus 424 ~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~g 503 (582)
++++++||+|.+++|+||||+||+|+++|+|||||||++||+||+|||+++|||++|||+|++||||||++||+||++++
T Consensus 333 ~hir~~ywld~~~ln~iyRykteey~~~a~NkfNi~p~sip~wl~dwlp~~gGY~igNv~Pa~~DfRffslGNllAILs~ 412 (571)
T PLN02973 333 YHMRSYFWLDLKQLNDIYRYKTEEYSHTAVNKFNVIPDSLPEWVFDFMPPHGGFFIGNVSPARMDFRWFALGNCIAILSS 412 (571)
T ss_pred HHHHHHHhcCHHHhhhHhhcchhhcchhhhhhccCCccccchhhhhhccCCCceeeeecccccCCcchhhhhhHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHH
Q 007986 504 LGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTY 577 (582)
Q Consensus 504 Ll~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~ 577 (582)
|++++|+++|+++|+++|+||++.||||+|+|||++++||++|++||||.||||||||+||+|+|+|++||+|.
T Consensus 413 Lat~~Qs~aIm~lIe~~w~~Lvg~MPlkicyPaie~~EWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~ 486 (571)
T PLN02973 413 LATPEQSTAIMDLIESRWEELVGEMPLKVCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKT 486 (571)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCCcceeccCcCCccceehhccCCCCCccceecCCCccHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999985
No 4
>PLN03005 beta-fructofuranosidase
Probab=100.00 E-value=7.8e-114 Score=917.09 Aligned_cols=388 Identities=58% Similarity=1.075 Sum_probs=375.5
Q ss_pred CCcchHHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhh
Q 007986 185 KREETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSW 264 (582)
Q Consensus 185 ~~~~~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~ 264 (582)
.++.++|+++||++|++++|+|||+|+||+||.++...++.||++||+||++||++++|+.|++|++|+||.++++||++
T Consensus 78 ~~~~~~~~~~a~~~l~~s~v~~~g~pvGtvAA~d~~~~~~lNY~qvF~RDfvpsaLafLl~Ge~eIVrnFl~~~L~Lq~~ 157 (550)
T PLN03005 78 SFEPHPMMAEAWEALRRSMVFFRGQPVGTLAAVDNTTDEVLNYDQVFVRDFVPSALAFLMNGEPDIVKHFLLKTLQLQGW 157 (550)
T ss_pred CCCCCcHHHHHHHHHHhheEEECCccceeeeecCCccccccCCCceeecccHHHHHHHHHCCCHHHHHHHHHHHHHHhhh
Confidence 47889999999999999999999999999999987544679999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHH
Q 007986 265 EKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTG 344 (582)
Q Consensus 265 ~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~ 344 (582)
|+++|+|++++|+||++|||.|++++ +++++++|||+.+||++.+|||+|||||+|++|.+.|||.+|+++|++|++
T Consensus 158 ek~~d~~q~g~G~mPaSfkv~~~p~~---~~~~l~aDfG~~aIGRv~pVDS~LWWIIllraY~k~tgD~s~~e~pevQrg 234 (550)
T PLN03005 158 EKRVDRFKLGEGVMPASFKVLHDPIR---ETDNIVADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLTLSETPECQKG 234 (550)
T ss_pred hhhhhcccCCCCCcCceeeecccccC---CCccccccccccccccccccchhhHHHHHHHHHHhhccchhhhhChHHHHH
Confidence 99999999999999999999997654 567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHH
Q 007986 345 IKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSF 424 (582)
Q Consensus 345 L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~ 424 (582)
|++||+.|++++||++|+|+||||++|+|||||++|||+|||||||+||||+.+|+...++ .+++++++.+|+.+|++
T Consensus 235 i~lil~lcLa~~Fd~~ptLlvpDgs~miDRrMgv~G~pLeiQaLfy~ALR~~~~~L~~~~~--~~~~i~~i~~rl~~L~~ 312 (550)
T PLN03005 235 MKLILSLCLAEGFDTFPTLLCADGCSMIDRRMGVYGYPIEIQALFFMALRSALSMLKPDGD--GREFIERIVKRLHALSF 312 (550)
T ss_pred HHHHHHHhcccccCCCceEeccCCccccccccccCCccHHHHHHHHHHHHHHHHhcCccch--hHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998877654 68999999999999999
Q ss_pred HHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCC
Q 007986 425 HIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSL 504 (582)
Q Consensus 425 ~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gL 504 (582)
|++++||+|.+++|+||||+||+|+++|+|||||+|++||+||+|||+++|||++|||+|++||||||++||+||+++||
T Consensus 313 h~r~yyWld~~~ln~iyr~kteey~~~a~NkfNi~pd~ip~wl~dwlp~~gGY~igNv~pa~~dfRffslGNllAILs~L 392 (550)
T PLN03005 313 HMRNYFWLDHQNLNDIYRFKTEEYSHTAVNKFNVMPDSIPEWVFDFMPLRGGYFVGNVGPAHMDFRWFALGNCVSILSSL 392 (550)
T ss_pred HHHHheecchhhhhhhhhccHhhhchhhhhccccCCccchhhhhhhcccCCceeeeecccccCCceehhhhhHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHH
Q 007986 505 GTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTY 577 (582)
Q Consensus 505 l~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~ 577 (582)
++++|+++|+++|+++|++|++.||||+|+|++++++||++|++||||.||||||||+||+|+|+|++||+|.
T Consensus 393 at~~Qs~aIm~lIe~~w~~Lv~~MPlkIcyPa~e~~eWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~ 465 (550)
T PLN03005 393 ATPDQSMAIMDLLEHRWEELVGEMPLKICYPCLEGHEWRIVTGCDPKNTRWSYHNGGSWPVLLWQLTAACIKT 465 (550)
T ss_pred CCHHHHHHHHHHHHHHHHHHhccCCcceeecccCCccceecccCCCCCCCccccCCCcchHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999889999999999999999999999999999999999985
No 5
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative. The seed for this model is composed of two uncharacterized archaeal proteins from Methanosarcina acetivorans and Sulfolobus solfataricus. Trusted cutoff is set so that essentially only archaeal members hit the model. The notable exceptions to archaeal membership are the Gram positive Clostridium perfringens which scores much better than some other archaea and the Cyanobacterium Nostoc sp. which scores just above the trusted cutoff. Noise cutoff is set to exclude the characterized eukaryotic glycogen debranching enzyme in S. cerevisiae. These cutoffs leave the prokaryotes Porphyromonas gingivalis and Deinococcus radiodurans below trusted but above noise. Multiple alignments including these last two species exhibit sequence divergence which may suggest a subtly different function for these prokaryotic proteins.
Probab=100.00 E-value=5.2e-54 Score=474.47 Aligned_cols=277 Identities=19% Similarity=0.211 Sum_probs=218.1
Q ss_pred cccCeeEeccCCCCCCCCCCCCcccchhHHHHHHH-HhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeecc
Q 007986 208 ESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAF-LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRN 286 (582)
Q Consensus 208 ~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lgl-L~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h 286 (582)
.+..-||.|+. +||.. ||||+|||++|+ |++|+++.||++|+++++ ++ .+|+|||.|
T Consensus 278 ~~~~~tiiAGy------pwF~~-WGRDt~Isl~Gl~l~tgr~~~A~~iL~~fa~----------~~-~~GliPN~~---- 335 (575)
T TIGR01561 278 AKDENAIIAGY------HWFDD-WGRDSFISLEGLLLIDKQFDEAKEAILKFAN----------LC-KRGLIPNNF---- 335 (575)
T ss_pred CCCCcEEEecC------chhcc-chhHHHHHHHHHHhcCCcHHHHHHHHHHHHH----------Hh-HCCCCCCcc----
Confidence 34455688887 58875 999999999997 679999999999997764 44 489999977
Q ss_pred ccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhh-cCCCCC----CC
Q 007986 287 VPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCL-ADGFDM----FP 361 (582)
Q Consensus 287 ~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l-~~gfd~----~p 361 (582)
++.|..| +|++||||||||+++++|+++|||.+++++ +...++.|++++. +.+|.. ..
T Consensus 336 -------------~~~g~~p--~YntvDAtLWfi~al~~Y~~~tgD~~~l~~--l~p~l~~ii~~y~~G~~~~i~~d~dG 398 (575)
T TIGR01561 336 -------------IAFGGDP--IYNGVDASLWAIHAIDKTFAYSQDFLFIRD--VVDKVLDIIDNYCAGNDFAIGMDNDL 398 (575)
T ss_pred -------------CCCCCCc--cCCCchHHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHhcCCCcEEEECCCc
Confidence 4444443 789999999999999999999999999988 4444555555443 334431 12
Q ss_pred ceeccCCCcccccc------ccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchh
Q 007986 362 SLLVTDGSCMIDRR------MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMK 435 (582)
Q Consensus 362 ~Llv~Dg~~WmD~r------~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~ 435 (582)
++......||||.+ +||.|+|||||||||+||+.+++|++..|+ . +..+++.++.||++|++.||++..
T Consensus 399 Li~~g~~lTWMDa~~g~~~~tPR~G~~VEInALwYnAL~~~a~la~~~g~--~---a~~y~~~A~~lk~~F~~~FW~~~~ 473 (575)
T TIGR01561 399 IFHKGAPLTWMDAKVDERAVTPRAGAACEINALWYNALKTAEFLGNELGE--D---AESLEEKAAGVAKNFAEKFINPDG 473 (575)
T ss_pred cEeCCCCCCCCCCCCCCccCCCCCCccHHHHHHHHHHHHHHHHHHHHhCc--c---HHHHHHHHHHHHHHHHHhcCCCCC
Confidence 33335567999975 589999999999999999999999998875 1 334667788899999999998532
Q ss_pred hhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCcc-----ccccccccch-hhh--hcCCCCH
Q 007986 436 KINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHM-----DFRFFTLGNL-WSI--VSSLGTP 507 (582)
Q Consensus 436 ~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~-----D~R~~alGNl-LAI--~~gLl~~ 507 (582)
||+++.+++... | ..+.+|. +|+ +++++++
T Consensus 474 ----------------------------------------g~l~D~v~~d~~~~~~~d--~s~RPNql~A~sL~~~ll~~ 511 (575)
T TIGR01561 474 ----------------------------------------NCLFDLIHQDEAGNQVKD--KAIRPNQIFAISLPFPIIDD 511 (575)
T ss_pred ----------------------------------------CeeEEEEecCCCCCcccc--cccCCCceeHhhCCCCCCCH
Confidence 233332222111 2 2344443 344 7899999
Q ss_pred H-HHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHH
Q 007986 508 K-QNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIV 575 (582)
Q Consensus 508 e-qa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~l 575 (582)
+ ++++|++++++ +|+||+|||||+| .|+.|+++|.|++..|+.|||||+|||||+|+|+.|++
T Consensus 512 ~~~~~~vl~~v~~---~Lltp~GlRTLsp--~d~~Y~p~Y~g~~~~Rd~aYHqGtvWpwl~G~y~~A~l 575 (575)
T TIGR01561 512 ESIAKAILDLIEK---DLLRPFGLKSLSR--DDPLYKGQYKGDALSRDTAYHNGSLPPWLHGALVKARL 575 (575)
T ss_pred HHHHHHHHHHHHh---hccCCcccccCCC--CCCCcCCCCCCCccccCCcCcCCCcCccchhhHHhhcC
Confidence 9 99999999998 9999999999999 99999999999999999999999999999999999985
No 6
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=100.00 E-value=2.7e-52 Score=440.02 Aligned_cols=280 Identities=26% Similarity=0.349 Sum_probs=222.9
Q ss_pred cCee-EeccCCCCCCCCCCCCcccchhHHHHHHH-HhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccc
Q 007986 210 PIGT-VAANDPGDKQPLNYDQVFIRDFVPSALAF-LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNV 287 (582)
Q Consensus 210 p~Gt-lAA~~~~~~~a~nY~~vfGRD~~IS~lgl-L~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~ 287 (582)
+.|+ ++|+. |||.. ||||++||++|+ |..|+++.++++|.+++..| ..|+||+.+
T Consensus 16 ~~~~~i~AG~------PWF~~-~GRDt~Isl~gl~l~~~~~~~a~~~L~~~~~~~-----------~~G~ipn~~----- 72 (370)
T PF06202_consen 16 EGGPSIAAGY------PWFST-WGRDTFISLPGLLLSPGRFEEARNILATFAGTQ-----------RHGLIPNEL----- 72 (370)
T ss_pred CCCceEeccC------ccccc-cccHHHHHHHHHHhCCCcHHHHHHHHHHHHHhh-----------hcCcccCcc-----
Confidence 4444 46765 79999 999999999996 78899999999999777432 279999965
Q ss_pred cCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHHHHHHHhh-cCCCC-CCCce
Q 007986 288 PLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCL-ADGFD-MFPSL 363 (582)
Q Consensus 288 ~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~~IL~~~l-~~gfd-~~p~L 363 (582)
++ |+.+ +||+||+|||||+++++|.++|||.+|+++ |.++++|+++.+... ....| ...++
T Consensus 73 ------------~~-~~~~--~Y~s~Dat~wfl~~l~~Y~~~t~D~~~l~~~~~~i~~il~~~~~g~~~~~~~d~~~gl~ 137 (370)
T PF06202_consen 73 ------------RD-GEEP--RYNSVDATLWFLIALQEYYRWTGDYSFLRELYPAIEEILEWYADGTDFGIRVDPEDGLI 137 (370)
T ss_pred ------------cC-CCCC--CCCCCccHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCCCccccccCCCee
Confidence 12 3333 689999999999999999999999999988 666666666544332 11223 12223
Q ss_pred eccC---CCcccccc------ccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcch
Q 007986 364 LVTD---GSCMIDRR------MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDM 434 (582)
Q Consensus 364 lv~D---g~~WmD~r------~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~ 434 (582)
...+ ..+|||.. .||.|++||||||||+||+++++|++..++ +.+.++++.++.||++|+++||++.
T Consensus 138 ~~~~~~~~~tWmD~~~~g~~~tpr~g~~vEIqal~y~AL~~~~~la~~~~~----~~a~~~~~~A~~lk~~F~~~FW~~~ 213 (370)
T PF06202_consen 138 YSGNGLNNQTWMDARNDGRPVTPRDGAAVEIQALWYNALRFAAELAEKFGD----ELAARYREWAERLKESFEKRFWDED 213 (370)
T ss_pred ecCCCCCCCCccccccCCccccCCCCcchHHHHHHHHHHHHHHHHHhhcCC----chHHHHHHHHHHHHHHHHHHHcCCC
Confidence 2233 57999976 378999999999999999999999997765 2677788889999999999999743
Q ss_pred hhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCC-ccccccccccch---hhhhcCCCCHHHH
Q 007986 435 KKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPA-HMDFRFFTLGNL---WSIVSSLGTPKQN 510 (582)
Q Consensus 435 ~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~-~~D~R~~alGNl---LAI~~gLl~~eqa 510 (582)
.||+.+.+++. ..| ..+..|. +++++++++++|+
T Consensus 214 ----------------------------------------~g~~~d~ld~~~~~d--~~irpN~~~a~~L~~~~l~~~~a 251 (370)
T PF06202_consen 214 ----------------------------------------RGYYADALDGDKEPD--DSIRPNQLIALSLPPGLLDPEQA 251 (370)
T ss_pred ----------------------------------------CCEEEEEecCCCCCC--cccccCchhHHhcCCccCCHHHH
Confidence 34555555543 233 2344453 2568999999999
Q ss_pred HHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHHh
Q 007986 511 ESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTYI 578 (582)
Q Consensus 511 ~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~~ 578 (582)
++|++.+++ +|++|+|||||+| .++.|+++|.|++..+++|||||+||||++|+|+.|++|+-
T Consensus 252 ~~vl~~~~~---~L~tp~GlRTLs~--~~~~Y~p~y~g~~~~rd~sYHnGsvWpw~~g~~~~al~r~g 314 (370)
T PF06202_consen 252 KKVLDRVEE---ELLTPWGLRTLSP--SDPRYNPIYEGDQDSRDMSYHNGSVWPWDNGIYAEALLRYG 314 (370)
T ss_pred HHHHHHHHH---HcCCCCchhcccC--CCCCcCCCCCCccccCcccccCCCcCcCcHHHHHHHHHHhC
Confidence 999999977 9999999999999 99999999999999999999999999999999999999974
No 7
>TIGR01531 glyc_debranch glycogen debranching enzymye. glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground.
Probab=100.00 E-value=2.2e-44 Score=419.63 Aligned_cols=295 Identities=16% Similarity=0.229 Sum_probs=209.1
Q ss_pred eEeccCCCCCCCCCCC----CcccchhHHHHHHH-HhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccc
Q 007986 213 TVAANDPGDKQPLNYD----QVFIRDFVPSALAF-LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNV 287 (582)
Q Consensus 213 tlAA~~~~~~~a~nY~----~vfGRD~~IS~lgl-L~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~ 287 (582)
+++|+. |||. .+||||+|||++|+ |++|+++.||++|+.++. +. .+|+|||.+
T Consensus 1022 si~AGy------PwF~tg~mr~WGRDTfISLrGLlL~tGR~~eAk~ii~~fa~----------~l-r~GLIPNll----- 1079 (1464)
T TIGR01531 1022 SLAAGL------PHFSVGYMRCWGRDTFIALRGMLLTTGRFDEARAIILAFAG----------TL-RHGLIPNLL----- 1079 (1464)
T ss_pred eEEecC------CccccCcccccchhheeecCcceeccCCHHHHHHHHHHHHH----------HH-HcCCCCCCC-----
Confidence 777776 5776 89999999999995 799999999999997763 33 489999966
Q ss_pred cCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCC-hhHHhhh--------------------hHHHHHH
Q 007986 288 PLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGD-YALQERV--------------------DVQTGIK 346 (582)
Q Consensus 288 ~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD-~~fl~~p--------------------~vq~~L~ 346 (582)
++ |..| +|+++||+||||.|+++|+++++| .++++++ .+.+.|+
T Consensus 1080 ------------~~-G~~p--rYNt~DA~lWfi~AIqdY~~~~~dg~~iL~~~v~R~fp~Ddt~~~~~~~~~~~l~~~iq 1144 (1464)
T TIGR01531 1080 ------------DE-GINP--RYNCRDAAWFWLQCIQDYVEIVPNGEKILKDPVRRIYPDDDSIPVDDGRADQYLFEVIY 1144 (1464)
T ss_pred ------------CC-CCcc--cccCccHHHHHHHHHHHHHHHcCCHHHhhhccccccccccccccccchhHHHHHHHHHH
Confidence 34 5444 689999999999999999999999 4553221 2344555
Q ss_pred HHHHHhhc-------------------CCCCC----C-Cceec--c---CCCcccc-------cc------ccCCCccee
Q 007986 347 LIMNLCLA-------------------DGFDM----F-PSLLV--T---DGSCMID-------RR------MGIHGHPLE 384 (582)
Q Consensus 347 ~IL~~~l~-------------------~gfd~----~-p~Llv--~---Dg~~WmD-------~r------~gr~G~pVE 384 (582)
.|+..... .||+. . .+.++ . +..|||| ++ +||.|+|||
T Consensus 1145 eIl~~h~~G~~fRE~NAGp~iD~~M~deGfn~~I~vD~~~GLI~gGn~~ncgTWMDkmg~SekA~~~G~p~TPRdG~aVE 1224 (1464)
T TIGR01531 1145 EALQKHFQGIQFRERNAGPQIDRVMTDEGFNVTIGVDWETGFIYGGNRFNCGTWMDKMGESEKAGNKGIPATPRDGAAVE 1224 (1464)
T ss_pred HHHHHHHcCCccccccccccchhhhccccccceEEEcCCCCcEecCCCCCCCCCcCCCCcccccccCCcccCCCCCCcee
Confidence 55544431 23321 0 12222 1 2469999 22 589999999
Q ss_pred hhHHHHHHHHHHHHHHHhc-----CCCCchHHHHHHHHHHHHHHHHHHHhhhcch--hhhhhhhhccccccccccccccC
Q 007986 385 IQALFYTALRCSREMLTVS-----DGSGSNNLVRAINNRLSALSFHIREYYWVDM--KKINEIYRYKTEEYSTDATNKFN 457 (582)
Q Consensus 385 IQALwYnALr~aaeLa~~~-----g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~--~~l~~iyr~~te~y~~~a~n~fn 457 (582)
||||||+||+++++|++.. |. +.....+.+-++.++..|++.||++. ..++++- ..-+|.-.
T Consensus 1225 InaLwynAL~~~~~l~~~~~~~~~g~---~~~~~~~~~wa~~ik~~Fe~~F~~~~~~~~lyDv~--------~~~vnrrg 1293 (1464)
T TIGR01531 1225 IVGLLKSALRFLIELKEKGVFKRSGV---ETQKWSYIEWNQKIQDNFEKRFFVDESQDADYDVA--------KLGVNRRG 1293 (1464)
T ss_pred HHHHHHHHHHHHHHHHHhcCcCcCCc---ccchhhHHHHHHHHHHHHhhhcCCCcccCcccccc--------chhhcccc
Confidence 9999999999999999865 33 11112244445567999999999842 2222110 00111111
Q ss_pred CCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCC
Q 007986 458 IYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPAL 537 (582)
Q Consensus 458 i~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l 537 (582)
||-+. ..+..+|-...+||++ .+ .++++..|+++++++++++.+ + +|+||+|||||+|
T Consensus 1294 IykD~--------~~s~~~~~D~qlRPN~----~i----A~sla~~l~~~~~a~~~L~~v-~---~LltP~GlRTLdP-- 1351 (1464)
T TIGR01531 1294 IYKDS--------YGSTKPWTDYQLRPNF----AI----AMTVAPELFVPEKAWKALTIA-E---VLLGPLGMKTLDP-- 1351 (1464)
T ss_pred ccccc--------cCCCCCCCCcccCCCc----eE----EEeCCcccCCHHHHHHHHHHH-H---HhccCCccccCCC--
Confidence 22111 0111222222344442 11 114478999999999999999 6 8999999999999
Q ss_pred CCCCceeeeCCCCCCCCC------CCccCCCCccchHHHHHHHHHH
Q 007986 538 ESEDWRIITGSDPKNTPW------SYHNGGSWPTLLWQVSSDIVTY 577 (582)
Q Consensus 538 ~d~~Wr~~~~gd~~nrp~------SYHNGgvWPwLLg~y~~A~lk~ 577 (582)
.|++|+++|.|++.+|+. +||||++||||+|+|+.|++|+
T Consensus 1352 ~D~~Y~g~Y~g~~dsrD~~t~kg~aYHqG~eW~WllG~fl~A~lk~ 1397 (1464)
T TIGR01531 1352 SDWNYRGYYNNGEDSDDFATAKGRNYHQGPEWVWPIGYFLRARLHF 1397 (1464)
T ss_pred CCcCCCCccCCchhhccccccccccccCCCcCccchhHHHHHHHHh
Confidence 999999999999999998 9999999999999999999986
No 8
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-39 Score=362.04 Aligned_cols=293 Identities=23% Similarity=0.296 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcc
Q 007986 190 EIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVD 269 (582)
Q Consensus 190 ~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld 269 (582)
+...+|..+|-.+.+....+..+.+|. .| .++||. +||||++||++|+|+.|++|+||+.|++++++
T Consensus 249 ~~~~~a~~dl~~~~~~~~~~g~~~~Ag-~P---~~~WF~-~fGRD~lIS~lgll~~g~~elArg~L~~~a~~-------- 315 (641)
T COG3408 249 EAFRRAKADLLELTTSTGETGPGLYAG-LP---IAHWFS-PFGRDTLISALGLLLVGRFELARGTLNTLARY-------- 315 (641)
T ss_pred HHHHHHHHHHHHHHhhccccCcceEec-CC---cchhcc-ccchHHHHHHHHHHhcCCHHHHHHHHHHHHhh--------
Confidence 344455555555433221123444444 43 237999 99999999999997669999999999988843
Q ss_pred cCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHHH
Q 007986 270 CYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKL 347 (582)
Q Consensus 270 ~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~~ 347 (582)
+ ..|.||+.+ . ...+.. .+||+||+|+||++++.+|+++|+|.+|+++ +.++.+++|
T Consensus 316 --~-~~GkIPhe~--~--------------~~~~~~--~~Y~tvD~t~~~i~~~~~y~~~t~d~~~i~e~~~~v~~a~d~ 374 (641)
T COG3408 316 --S-EPGKIPHEI--L--------------LSIPGE--PYYNTVDATPLFIYLLGAYLKYTGDTEFIRELWPSVGAALDW 374 (641)
T ss_pred --c-cCCCCcchh--h--------------hcCCCc--ceeccCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 3 478888854 1 111111 3799999999999999999999999999998 777777777
Q ss_pred HHHHhhcCCCCCCCceecc--CCCcccccc------ccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHH
Q 007986 348 IMNLCLADGFDMFPSLLVT--DGSCMIDRR------MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRL 419 (582)
Q Consensus 348 IL~~~l~~gfd~~p~Llv~--Dg~~WmD~r------~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra 419 (582)
++..-..+ |+.+...+.. +..+|||.. +||.|.|||||||||+|++.+..++..+++ .+.++++.+++
T Consensus 375 ~~~~~~~~-~~~~~~~l~~~~~~~tW~Ds~~~~~~~~~~~g~pi~i~al~~~~~~a~~~~a~ll~~---~~~~~~~~~~a 450 (641)
T COG3408 375 ILKGFDFG-FDTYGDGLLEGGSNQTWMDSGDDIFAVTPRAGKPVAINALQYYALKAALRLANLLGD---EEDAARLEKIA 450 (641)
T ss_pred HHhcCCcc-ceecCcccccCCCCCCCeecCCccccccCCCCCceeHHHHHHHHHHHHHHHHHHhcc---cccHHHHHHHH
Confidence 66554333 5555444443 468999976 468899999999999999999999998873 34566677888
Q ss_pred HHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhh
Q 007986 420 SALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWS 499 (582)
Q Consensus 420 ~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLA 499 (582)
+.|+++|++.||++ .+++++.- .+.++ -++|+. . |.+.
T Consensus 451 ~~l~~~F~~~fw~~-~~f~dl~~------------------------------~~~~~---~~r~~~-----~---~a~~ 488 (641)
T COG3408 451 RRLKESFEAKFWNP-TGFYDLAL------------------------------DDKDV---PIRPNF-----S---NAIH 488 (641)
T ss_pred HHHHHHHHHHhhCc-cchHhhhc------------------------------cCCCc---ccCccc-----e---eccc
Confidence 88999999999986 44443321 00011 122222 1 1223
Q ss_pred h-hcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHHh
Q 007986 500 I-VSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTYI 578 (582)
Q Consensus 500 I-~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~~ 578 (582)
+ ..++.+++.+ .|++++++ +|+||+|||+|+| .++ .++|+.||||+||||++|.|+.++.|+-
T Consensus 489 l~~~gi~~~~~~-~~~~l~e~---~lltp~GlRTLS~--~dp----------~Y~p~yYH~GtVWP~~~gifv~g~~r~G 552 (641)
T COG3408 489 LLYTGIVDPERA-VIIRLAEE---DLLTPWGLRTLSP--DDP----------RYNPMYYHNGTVWPHDTGIFVLGLRRYG 552 (641)
T ss_pred ccccccCchHHH-HHHHHHHH---hccCCccccccCC--CCC----------CcCCCcccCCCcccchHHHHHHHHHHcC
Confidence 3 5555566555 88888888 9999999999999 554 4555559999999999999999999874
No 9
>PRK10137 alpha-glucosidase; Provisional
Probab=99.89 E-value=1.7e-21 Score=221.52 Aligned_cols=322 Identities=12% Similarity=0.098 Sum_probs=219.5
Q ss_pred CCcchHHHHHHHHHHHHHhhhcccccCe------eEeccCCCCCCCCCCCC--cccchhHHHHHHHHhcCChHHHHHHHH
Q 007986 185 KREETEIEKEAWRLLQEAVVTYCESPIG------TVAANDPGDKQPLNYDQ--VFIRDFVPSALAFLLKGEGEIVRNFLL 256 (582)
Q Consensus 185 ~~~~~~~~~~A~~~Lr~~~v~~~~~p~G------tlAA~~~~~~~a~nY~~--vfGRD~~IS~lglL~~G~pEiar~~L~ 256 (582)
..+..++..+|.+-|+.. .-.+.| |+++ +..+||.. .|+||+.+.++|++.. +||+|++.|+
T Consensus 303 ~~~~~~l~~kA~~~L~~N----wr~~~g~~~~~~t~Ps-----~gl~Wf~~~~~W~WDS~~~A~~la~f-dpelA~~~lr 372 (786)
T PRK10137 303 TPEQTRVAVKAMETLNGN----WRSPAGAVKFNTVTPS-----VTARWFSGNQTWPWDTWKQAYAMAHF-NPDVAKENIR 372 (786)
T ss_pred CHHHHHHHHHHHHHHHHh----ccccccccccCceEeC-----CCCCCCCCCCccchHHHHHHHHHhhc-CHHHHHHHHH
Confidence 456667888999999886 233443 4433 45699999 9999999999998877 8999999999
Q ss_pred HHHhhhhhhhhcccCCC-CCCCCCCceeeccccCCCccccccccCCC-CCCccCccCC-CCcHHHHHHHHHHHHHHhCCh
Q 007986 257 HTLQLQSWEKTVDCYSP-GQGLMPASFKVRNVPLESNKFEEVLDPDF-GESAIGRVAP-VDSGLWWIILLRAYGKITGDY 333 (582)
Q Consensus 257 ~la~lQs~~~tld~~~~-~~GliP~sfKI~h~~~r~~~ge~~l~pd~-Ge~~i~~ygs-VDAtLWfIIaL~~Y~k~TGD~ 333 (582)
+|+.+|.+.. |++++ ..|+||- -|.|.+ -|+. |+.. ..++ .--.+.+.|++++++++|+|.
T Consensus 373 ~Lf~~Q~~~~--d~~r~~~~G~Iph--~vf~~~----------~p~R~g~~~--~~ne~~tqPPL~a~av~~vy~~t~d~ 436 (786)
T PRK10137 373 AVFSWQIQPD--DSVRPQDVGFVPD--LIAYNL----------SPERGGDGG--NWNERNTKPSLAAWSVMEVYNVTQDK 436 (786)
T ss_pred HHHHhhcccc--CCCCcCCCCeeeE--EeccCC----------Ccccccccc--cccCCCcCcCHHHHHHHHHHHHhCCH
Confidence 9999998876 67765 4688887 334421 1222 2221 1121 222488999999999999999
Q ss_pred hHHhh--hhHHHHHHHHHHHhh--cCCCCCCC------------------------------------------------
Q 007986 334 ALQER--VDVQTGIKLIMNLCL--ADGFDMFP------------------------------------------------ 361 (582)
Q Consensus 334 ~fl~~--p~vq~~L~~IL~~~l--~~gfd~~p------------------------------------------------ 361 (582)
+|+++ |++.+..+|++..-. ++|+-.|.
T Consensus 437 ~fl~~lyPkL~a~h~Ww~~~RD~dg~Gl~eY~~~~~~~h~~~~g~~~~~i~~~~~~~~~~G~~n~~~~~~~~~~~~~~~~ 516 (786)
T PRK10137 437 AWLAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIP 516 (786)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceeEeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999 888888888776543 22332211
Q ss_pred ceec-c--CCC----ccc------------------------------cccccCC-Cc--ceehhHHHHHHHHHHHHHHH
Q 007986 362 SLLV-T--DGS----CMI------------------------------DRRMGIH-GH--PLEIQALFYTALRCSREMLT 401 (582)
Q Consensus 362 ~Llv-~--Dg~----~Wm------------------------------D~r~gr~-G~--pVEIQALwYnALr~aaeLa~ 401 (582)
.+.. + +|. .|- |.++... -. +|++|+|.|.|.+.+++|++
T Consensus 517 ~~~~~~WESGmDNap~f~~i~~~~~~~y~r~~y~r~~~~V~~~~~~~~dg~l~~~p~~~e~VDLNsyLy~a~~~LA~LAe 596 (786)
T PRK10137 517 AQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMAT 596 (786)
T ss_pred ccccCCCCCCCCCccccccccccccchhhhccccccceeeeehhcccCCCCccCCCCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 0001 1 111 121 1100000 12 78999999999999999999
Q ss_pred hcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecc
Q 007986 402 VSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGN 481 (582)
Q Consensus 402 ~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~ 481 (582)
.+|+ .+.+++++++++.|+..|++.||.+..+++.=| ..+.... ..-..|-+
T Consensus 597 ~LG~---~e~A~~~~~~A~~Lr~aIn~~~WDee~GfY~Dy--dL~~~~~--------------------~~~~~g~~--- 648 (786)
T PRK10137 597 ILGK---PEEAKRYRQLAQQLADYINTCMFDETTGFYYDV--RIEDKPL--------------------ANGCAGKP--- 648 (786)
T ss_pred HhCC---hHHHHHHHHHHHHHHHHHHHHccCCcCCeEEEE--ecCcccc--------------------cccccCcc---
Confidence 9987 577788899999999999999999776542111 0000000 00000001
Q ss_pred cCCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCC
Q 007986 482 LQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGG 561 (582)
Q Consensus 482 v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGg 561 (582)
.+.+....++.+.+++++++++|+++|++.+... ..+.+++|+++++| .+ +.+.|..||+|.
T Consensus 649 -----i~~~~~~~agf~PLwaGia~~eqA~~VV~~L~~p-~~F~t~~GipTlS~--s~----------p~ydp~~YWRGp 710 (786)
T PRK10137 649 -----IVERGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNTFVPLGTAAL--TN----------PAFGADIYWRGR 710 (786)
T ss_pred -----eeeeccCccchhhccCCCCCHHHHHHHHHHhcCh-hhcCCCCCccCcCC--Cc----------cccCCCCCCCCC
Confidence 0111233445567899999999999999999854 25667889999998 44 445566899999
Q ss_pred CCccchHHHHHHHHHHh
Q 007986 562 SWPTLLWQVSSDIVTYI 578 (582)
Q Consensus 562 vWPwLLg~y~~A~lk~~ 578 (582)
|||.+.|+.+.++.||-
T Consensus 711 VWpp~N~Li~~GL~rYG 727 (786)
T PRK10137 711 VWVDQFYFGLKGMERYG 727 (786)
T ss_pred cCHhHHHHHHHHHHHcC
Confidence 99999999999988763
No 10
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]
Probab=99.88 E-value=1.6e-22 Score=226.34 Aligned_cols=293 Identities=19% Similarity=0.257 Sum_probs=193.6
Q ss_pred CCCCCCcccchhHHHHHHH-HhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCC
Q 007986 224 PLNYDQVFIRDFVPSALAF-LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDF 302 (582)
Q Consensus 224 a~nY~~vfGRD~~IS~lgl-L~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~ 302 (582)
..+|..|||||+|||+.|+ |.+|++..||+++..++. |+ ..|+|||.. |-
T Consensus 1076 svg~mRcWGRDtFIaLrG~ll~TGRy~EAr~iIlaFa~------tl-----rHGLIPNLL------------------d~ 1126 (1521)
T KOG3625|consen 1076 SVGIMRCWGRDTFIALRGILLITGRYVEARNIILAFAG------TL-----RHGLIPNLL------------------DE 1126 (1521)
T ss_pred hhhhhhhcccceeeecccceEeecchHHHHHHHHHHHH------Hh-----hccccchhh------------------hc
Confidence 4689999999999999996 699999999999987763 22 479999943 22
Q ss_pred CCCccCccCCCCcHHHHHHHHHHHHHHhCC----------------hhHH------hh---hhHHHHHHHHHHHhh----
Q 007986 303 GESAIGRVAPVDSGLWWIILLRAYGKITGD----------------YALQ------ER---VDVQTGIKLIMNLCL---- 353 (582)
Q Consensus 303 Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD----------------~~fl------~~---p~vq~~L~~IL~~~l---- 353 (582)
|-- .+|++=||+.||+.++++|+....+ .+.+ .+ ..+|++|+.....+.
T Consensus 1127 G~~--~RyNcRDA~W~wl~~Iq~Yve~vPnG~~ILkd~VsRiyP~DDs~v~~pgaf~q~L~evi~Eal~kH~qGiqfREr 1204 (1521)
T KOG3625|consen 1127 GIY--ARYNCRDAVWWWLQCIQDYVEMVPNGLDILKDPVSRIYPTDDSAVLPPGAFDQPLFEVIQEALQKHFQGIQFRER 1204 (1521)
T ss_pred ccc--ccccchHHHHHHHHHHHHHHHhCCChhhhhhCchheeCCCCCcccCCCchhhHHHHHHHHHHHHHHhccccchhc
Confidence 322 3899999999999999999875422 1111 11 123444433322211
Q ss_pred -----------cCCCCCC-----Cceecc-----CCCccccccc--------------cCCCcceehhHHHHHHHHHHHH
Q 007986 354 -----------ADGFDMF-----PSLLVT-----DGSCMIDRRM--------------GIHGHPLEIQALFYTALRCSRE 398 (582)
Q Consensus 354 -----------~~gfd~~-----p~Llv~-----Dg~~WmD~r~--------------gr~G~pVEIQALwYnALr~aae 398 (582)
..||+.. -+.++- +..||||- | ||.|..||||+|-|.|||++.+
T Consensus 1205 nAGpqiD~~M~DeGFnv~~gV~~~TGfv~GGn~~NCGTWMDK-MGeSerAgnkG~PaTPRDGsAVEi~GL~~salrfl~e 1283 (1521)
T KOG3625|consen 1205 NAGPQIDRNMKDEGFNVTAGVDEETGFVYGGNRFNCGTWMDK-MGESERAGNKGIPATPRDGSAVEIVGLSKSALRFLLE 1283 (1521)
T ss_pred cCCcccchhhhccCcceeeccccccceeecCCccccchhhhh-cccchhccCCCCCCCCCCCceeehhhhHHHHHHHHHH
Confidence 2355432 134442 45899995 5 5889999999999999999999
Q ss_pred HHHhc-----CC--CC---c-hHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccc
Q 007986 399 MLTVS-----DG--SG---S-NNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWL 467 (582)
Q Consensus 399 La~~~-----g~--~~---~-~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l 467 (582)
|.+.. |- .+ . +---..|++ .+++.|.+.|.++..--... +....-+|+=-||-++..
T Consensus 1284 lkek~ifpy~~Ve~k~~g~~~k~s~~eW~q---kiqdNFeK~ffV~ed~s~~~------~~~~~~vnkr~IykDsyg--- 1351 (1521)
T KOG3625|consen 1284 LKEKNIFPYHGVEVKRHGKAIKWSYDEWNQ---KIQDNFEKLFFVSEDPSDLN------EKHPNLVNKRGIYKDSYG--- 1351 (1521)
T ss_pred HHhcCCccccceEEecccccceecHHHHHH---HHHhhhhheecccCCcchhh------hhcccccchhheeccccc---
Confidence 98861 10 00 0 001122333 35889999999865421000 001123344444444411
Q ss_pred cccccCCCceeecccCCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeC
Q 007986 468 MDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITG 547 (582)
Q Consensus 468 ~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~ 547 (582)
...+|..--++|++ +=.|++.-.|.+++.+-+.++..++ -|++|.|||+|.| +|=.||++|.
T Consensus 1352 -----at~~~tDyQLR~NF--------~IamtVAPeL~~pe~A~kAle~Aek---vLlGPlGMkTlDP--~D~nYr~yYd 1413 (1521)
T KOG3625|consen 1352 -----ATSPWTDYQLRPNF--------TIAMTVAPELFTPEKAWKALEIAEK---VLLGPLGMKTLDP--DDWNYRGYYD 1413 (1521)
T ss_pred -----CCCCccceeccCCc--------eeEEEechhhcChHHHHHHHHHHHH---HhcCcccccccCh--hhcccccccC
Confidence 11122221233432 1123445667899999999999998 8999999999999 9999999997
Q ss_pred CCCCCC------CCCCccCCCCccchHHHHHHHHHHh
Q 007986 548 SDPKNT------PWSYHNGGSWPTLLWQVSSDIVTYI 578 (582)
Q Consensus 548 gd~~nr------p~SYHNGgvWPwLLg~y~~A~lk~~ 578 (582)
-+..+. -+.||||.-|-|+.|.|..|-+.+-
T Consensus 1414 N~~Ds~d~~takG~NYHQGPEWlw~~GyfLrArl~f~ 1450 (1521)
T KOG3625|consen 1414 NALDSDDYNTAKGFNYHQGPEWLWPIGYFLRARLYFS 1450 (1521)
T ss_pred CCccccchhhhccccccCCCceeehhHHHHHHHHHHH
Confidence 443332 4689999999999999999988653
No 11
>TIGR01577 oligosac_amyl oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (PubMed: 11549021), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Probab=99.68 E-value=9.4e-15 Score=164.14 Aligned_cols=203 Identities=13% Similarity=0.091 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHHhhhccccc-CeeEeccCCCCCCCC--CCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhh
Q 007986 190 EIEKEAWRLLQEAVVTYCESP-IGTVAANDPGDKQPL--NYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEK 266 (582)
Q Consensus 190 ~~~~~A~~~Lr~~~v~~~~~p-~GtlAA~~~~~~~a~--nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~ 266 (582)
.++++++-.|+.+ ...+ .+.+||...+..... -|.-+|.||+..++.+++..|.++.++.++.+|+..|.
T Consensus 256 ~~~~~Sll~Lk~~----~~~~~GaiiAs~s~~~~~~~~~~Y~y~W~RD~~~~a~Al~~~G~~~~a~~~l~~l~~~q~--- 328 (616)
T TIGR01577 256 SLYRRSLAVLRLL----TDGEYGSMIAAPEFDEDFVRCGGYAYCWGRDASYIATALDRAGYHDRVDRFFRWAMQTQS--- 328 (616)
T ss_pred HHHHHHHHHHHhc----cCCCCCcEEEcCCCCcccccCCCCceeccccHHHHHHHHHHCCCHHHHHHHHHHHHHhhC---
Confidence 3455554444442 1223 345566542211112 39999999999999999999999999999999996654
Q ss_pred hcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHHH
Q 007986 267 TVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIK 346 (582)
Q Consensus 267 tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~ 346 (582)
.+|..|..+.+ +|+. .| ...-...|.+-..++++++|++.|+|.+|+++ +.+.++
T Consensus 329 -------~~G~~~~~~~~--------dG~~--~~------~~~~~Q~D~~g~~l~al~~y~~~t~d~~~~~~--~~~~v~ 383 (616)
T TIGR01577 329 -------RDGSWQQRYYL--------NGRL--AP------LQWGLQIDETGSILWAMDQHYRLTNDRAFLEE--IWESVQ 383 (616)
T ss_pred -------cCCCcceEEec--------CCCC--CC------CCCCccccchhHHHHHHHHHHHHHCCHHHHHH--HHHHHH
Confidence 25555543321 1221 11 11124566666678899999999999999988 333444
Q ss_pred HHHHHhhcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH
Q 007986 347 LIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHI 426 (582)
Q Consensus 347 ~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f 426 (582)
.+++++...+-.. +..++-..|-. |.|+.++.+|++|.||+++++|++.+|+ .+.++++++.++.+++.|
T Consensus 384 ~a~~fl~~~~~~~---l~~~~~~lWEe----r~G~~~~t~a~~~aAL~~aa~lA~~lGd---~~~a~~~~~~Ad~ik~~i 453 (616)
T TIGR01577 384 KAAQYLILFIDPE---TPLPCRDLWEE----REGVFTYTASAVYGGLDAAAAVADKLGE---KRLAQNWKKAAEFIKRAV 453 (616)
T ss_pred HHHHHHHHhccCC---CCCCCCcccee----cCCccCccHHHHHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHHHHH
Confidence 4444444321111 33355557853 5688999999999999999999999987 467888999999999999
Q ss_pred HHhhhcch
Q 007986 427 REYYWVDM 434 (582)
Q Consensus 427 ~~~FWld~ 434 (582)
+++||.+.
T Consensus 454 ~~~~w~~~ 461 (616)
T TIGR01577 454 EERFWLPE 461 (616)
T ss_pred HHhccCCC
Confidence 99999753
No 12
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [].; PDB: 2OKX_B 3CIH_A.
Probab=99.36 E-value=4.6e-12 Score=138.47 Aligned_cols=175 Identities=23% Similarity=0.231 Sum_probs=115.9
Q ss_pred CC-CCCcccchhHHHHHHH-HhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCC
Q 007986 225 LN-YDQVFIRDFVPSALAF-LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDF 302 (582)
Q Consensus 225 ~n-Y~~vfGRD~~IS~lgl-L~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~ 302 (582)
.+ -+..|+-|+.++++.. ...|+.+.+|+.|+.++.. |..+|.+|... |..
T Consensus 143 ~RdER~~w~GD~~~~~~~~~~~~~~~~l~~~~l~~~~~~----------q~~~G~~p~~~-----------------P~~ 195 (509)
T PF05592_consen 143 KRDERLGWTGDARVSALTAYYSFGDAALYRKWLRDFADS----------QRPDGLLPSVA-----------------PSY 195 (509)
T ss_dssp TT-T---BHHHHHHHHHHHHCCT--HHHHHHHHHHHHGG----------TTTSTT-SSBS-----------------S--
T ss_pred chhhhcCCcchHHHHHHHHHHhCCcHHHHHHHHHHHHHh----------hcccCCceEEe-----------------ccc
Confidence 45 6788999999999995 5889999999999977732 23478999733 332
Q ss_pred CCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhhcCCCCCCCceeccCCCccc----cccccC
Q 007986 303 GESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMI----DRRMGI 378 (582)
Q Consensus 303 Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l~~gfd~~p~Llv~Dg~~Wm----D~r~gr 378 (582)
+ ....+..|-+++||+.+++|++.|||.+++++ +-..|+..|+++....-+....+....-.+|. +. ...
T Consensus 196 ~---~~~~~~~~w~l~~i~~~~~~y~~tGD~~~l~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DW~~~~~~~-~~~ 269 (509)
T PF05592_consen 196 G---GGGFGIPDWSLAWIIIPWDYYLYTGDREFLEE--YYPAMKRYLDYLERRVDDGLDGLPGWGFGDWLAPGNDG-DGP 269 (509)
T ss_dssp ----SSGGGBHHHHHHHHHHHHHHHHHHT-HHHHHH--HHHHHHHHHHHHHTTB-TSSB-CCSB--S-SS----TT----
T ss_pred C---CCCCCCccHHHHHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHHHHhCCccccCCCCCceeecCCccCcc-ccc
Confidence 1 11345677789999999999999999999998 44455555555553211100011111224665 22 223
Q ss_pred CCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchh
Q 007986 379 HGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMK 435 (582)
Q Consensus 379 ~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~ 435 (582)
.+..+-.|+++|.||+.+++|++.+|+ .+.+++++++++.||+.|++.||.+.+
T Consensus 270 ~~~~~~~~~~~~~~l~~~a~lA~~lg~---~~~a~~y~~~a~~lk~a~~~~~~d~~~ 323 (509)
T PF05592_consen 270 TPGATITNALYYYALRAAAELAEALGK---DEDAAEYRARAERLKAAINRHFWDPEK 323 (509)
T ss_dssp SCCEEHHHHHHHHHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHHHHHHCEETTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHhccCccc
Confidence 344555899999999999999999987 566889999999999999999997543
No 13
>PRK13271 treA trehalase; Provisional
Probab=99.24 E-value=5.9e-10 Score=124.67 Aligned_cols=256 Identities=15% Similarity=0.220 Sum_probs=169.3
Q ss_pred CCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCC
Q 007986 224 PLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFG 303 (582)
Q Consensus 224 a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~G 303 (582)
.-+|+..+.=|+.-.++|+|.+|..++||+.++.++-+ + ..-|.|||.-++
T Consensus 154 GGRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~Nf~~~------i----~~yG~IPNg~R~------------------- 204 (569)
T PRK13271 154 GGRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHE------I----DTWGHIPNGNRS------------------- 204 (569)
T ss_pred CCCcchhhhhHHHHHHHhhHhcCCHHHHHHHHHHHHHH------H----HHhCcCcCCchh-------------------
Confidence 34799999999999999999999999999999988742 1 236899994322
Q ss_pred CCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHHHHHHHh--------------hcCCCC--CC-----
Q 007986 304 ESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLC--------------LADGFD--MF----- 360 (582)
Q Consensus 304 e~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~~IL~~~--------------l~~gfd--~~----- 360 (582)
||-+=-=.+.|.--+..|+..|+| +++++ |.+++-.+.=++.- +.++.. -|
T Consensus 205 -----YYl~RSQPP~l~~Mv~~~~~~~~~-~~l~~~lp~l~kEy~~Wm~~~~~~~~~~~~~r~v~~~~~~~L~rY~~~~~ 278 (569)
T PRK13271 205 -----YYLSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMEGVENLQPGQQEKRVVKLQDGTLLNRYWDDRD 278 (569)
T ss_pred -----hcccCCCChhHHHHHHHHHhcCcH-HHHHHHHHHHHHHHHHHhCCCcccCccccccceEEeCCCCcccccccCCC
Confidence 222222235566677888888888 46655 55555444322110 000100 00
Q ss_pred -C---------------------ceec----c-----C-CCcccccc--c----cCCCcceehhHHHHHHHHHHHHHHHh
Q 007986 361 -P---------------------SLLV----T-----D-GSCMIDRR--M----GIHGHPLEIQALFYTALRCSREMLTV 402 (582)
Q Consensus 361 -p---------------------~Llv----~-----D-g~~WmD~r--~----gr~G~pVEIQALwYnALr~aaeLa~~ 402 (582)
| .++. . | .+-|+.-+ + -+.=.||++|||||++.+.++++++.
T Consensus 279 ~PRpEsy~eD~~~a~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~~i~t~~IiPVDLNALLy~ae~~LA~la~~ 358 (569)
T PRK13271 279 TPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTIRTTSIVPVDLNALMFKMEKILARASKA 358 (569)
T ss_pred CCCCCcHHHHHHHHhhCCcchHHHHHHHHHHHhhcCCcchhhhccCCccccccccccccCchHHHHHHHHHHHHHHHHHH
Confidence 0 0000 0 1 12244211 0 01227899999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeeccc
Q 007986 403 SDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNL 482 (582)
Q Consensus 403 ~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v 482 (582)
+|+ .+.++.++++++.++..|++.||.+..+. ++|+.
T Consensus 359 lGd---~~~A~~y~~~A~~rr~AI~~~LWnee~G~----------------------------------------f~DYD 395 (569)
T PRK13271 359 AGD---NAMANQYETLANARQKAIEKYLWNDKEGW----------------------------------------YADYD 395 (569)
T ss_pred hCC---hhhHHHHHHHHHHHHHHHHHhcccCCCCE----------------------------------------EEEEE
Confidence 987 45666788888889999999999754322 22211
Q ss_pred CCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCC
Q 007986 483 QPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGS 562 (582)
Q Consensus 483 ~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgv 562 (582)
-..+.-...+...|++-++.++++++|+++|++.+.+ +|+++.||++..| ++ ..|=.|.+
T Consensus 396 l~~~~~r~~~saa~f~PLwag~a~~~qA~~Vv~~l~~---~Ll~pgGLpTt~~--~S---------------gqQWD~Pn 455 (569)
T PRK13271 396 LKSHKVRNQLTAAALFPLYVNAAAKDRANKVAAATKT---HLLQPGGLNTTSV--KS---------------GQQWDAPN 455 (569)
T ss_pred CCCCCEeechhHHHHHhhhcCCCCHHHHHHHHHHHHH---hcCCCCCccCCCC--CC---------------CCCCcCcc
Confidence 1010000023445666778899999999999999886 7899999999887 21 24667777
Q ss_pred -CccchHHHHHHHHHH
Q 007986 563 -WPTLLWQVSSDIVTY 577 (582)
Q Consensus 563 -WPwLLg~y~~A~lk~ 577 (582)
||-+.|..+.++.++
T Consensus 456 gWaPlq~iiieGL~~y 471 (569)
T PRK13271 456 GWAPLQWVATEGLQNY 471 (569)
T ss_pred cCHhHHHHHHHHHHHc
Confidence 999999999998875
No 14
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []. It is involved in sphingomyelin generation and prevention of glycolipid accumulation and may also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo []. ; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0016021 integral to membrane; PDB: 1V7V_A 1V7W_A 1V7X_A.
Probab=99.22 E-value=4e-11 Score=127.72 Aligned_cols=199 Identities=19% Similarity=0.198 Sum_probs=89.6
Q ss_pred cCCCCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHHHHHHHhhcCCCCCCCceeccCC--CccccccccCCCcceeh
Q 007986 310 VAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCLADGFDMFPSLLVTDG--SCMIDRRMGIHGHPLEI 385 (582)
Q Consensus 310 ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~~IL~~~l~~gfd~~p~Llv~Dg--~~WmD~r~gr~G~pVEI 385 (582)
....|..++||+.+++|+++|||.+|+++ |.++++|++.+.+- .|... |.-..+ ..+.|. ....|...+.
T Consensus 95 ~~~~D~~~~fVL~vyr~~~~TGD~~fL~~~wp~v~~a~~~~~~~D----~d~dG-l~e~~g~~D~TyD~-~~~~G~say~ 168 (365)
T PF04685_consen 95 YAWKDLNPKFVLQVYRDYKWTGDRDFLKEMWPAVKKAMDYLLSWD----RDGDG-LPENPGHPDQTYDD-WSMYGPSAYC 168 (365)
T ss_dssp ----------------------------EHHHHHHHHHHHHHHSB------TTS--BEEET---SSSTT--EEEEEEHHH
T ss_pred cccccccccccccccccccccccchhhhhHHHHHHHHHHHHHhhC----CCCCC-CCCCCCCCcccccc-CCeeCCCHHH
Confidence 46899999999999999999999999998 77777777766521 11111 111122 145565 3467899999
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhcccc-ccccccccccCCCCCCcc
Q 007986 386 QALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTE-EYSTDATNKFNIYPEQIP 464 (582)
Q Consensus 386 QALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te-~y~~~a~n~fni~p~~ip 464 (582)
++||+.||+++++|++.+|+ .+.+++.++.++..+..|++.+|+.. .|+...+ .+.
T Consensus 169 ~~L~laAL~A~~emA~~lgd---~~~a~~y~~~~~~~~~~~~~~LWnGe-----yy~~~~d~~~~--------------- 225 (365)
T PF04685_consen 169 GGLWLAALRAAAEMAKILGD---PELAAKYRELAEKAKKAFNKKLWNGE-----YYRQWYDSKYQ--------------- 225 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHT----HHHHHHHHHHHHHHHHHHHHHSEETT-----EE--EE---TT---------------
T ss_pred HHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHhhCHh-----heeeeeccCCC---------------
Confidence 99999999999999999987 78899999999999999999999753 1220000 000
Q ss_pred ccccccccCCCceeecccCCCccccccccccchhhh---hcCCCCHHHHHHHHHHHHhhhhhhc----cCCCceecCCCC
Q 007986 465 SWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSI---VSSLGTPKQNESILNLIEAKWDDLV----GHMPLKICYPAL 537 (582)
Q Consensus 465 ~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI---~~gLl~~eqa~~Ild~i~~~w~eLl----tp~gLR~l~P~l 537 (582)
...+-+ .| -.+|.-+|- +-.++++++.++.|+.|.+- ... +++|+..+.=|
T Consensus 226 --------~~~~~~--------aD---Ql~Gqw~a~~~gl~~v~~~e~v~sAL~sI~~~--N~~~~~~~~~G~~n~~~p- 283 (365)
T PF04685_consen 226 --------NGDGCM--------AD---QLCGQWWARLLGLGDVLDEEKVKSALRSIYEY--NVKYFLGGEMGAVNGVWP- 283 (365)
T ss_dssp --------S-EES---------TT----SS--EEHHHHHHTT-S-HHHHHHHHHHHHHH--HEE-S-BTTTBGGGGS-T-
T ss_pred --------CCCeEE--------eC---hhhHHHHHHHcCCcCCCCHHHHHHHHHHHHHh--cCeEccCCCCcEEEeeec-
Confidence 000011 11 123443332 56679999999999999984 444 57777664432
Q ss_pred CCCCceeeeCCCCCCCCCCCccCCCCccchHHH
Q 007986 538 ESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQV 570 (582)
Q Consensus 538 ~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y 570 (582)
+-+...-+.|...|||=+--..
T Consensus 284 -----------~g~~~~~~~q~~evW~G~~y~~ 305 (365)
T PF04685_consen 284 -----------DGKPDTSSPQSNEVWTGVEYAV 305 (365)
T ss_dssp ---------------------------------
T ss_pred -----------cccccccccccccccccccccc
Confidence 1113444677788999554333
No 15
>PLN02567 alpha,alpha-trehalase
Probab=99.04 E-value=2e-08 Score=112.50 Aligned_cols=272 Identities=13% Similarity=0.087 Sum_probs=176.1
Q ss_pred CCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCC
Q 007986 224 PLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFG 303 (582)
Q Consensus 224 a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~G 303 (582)
.-+|+..|.=|+.-.++|+|..|..+.||+.++.++.+|- ..|.|||.-.
T Consensus 147 GgRFrE~yyWDSy~i~~GLl~s~~~~~A~~mi~Nf~~~i~----------~~GfIPNg~R-------------------- 196 (554)
T PLN02567 147 GSRFREVYYWDSYWVIRGLLASKMYETAKGVVENLLYLVD----------TYGFVPNGAR-------------------- 196 (554)
T ss_pred CCCcCccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH----------HcCcCCCCCc--------------------
Confidence 3579999999999999999999999999999999986533 3799998321
Q ss_pred CCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHHHHHHH--h--hcC--CCCCC----------C----
Q 007986 304 ESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNL--C--LAD--GFDMF----------P---- 361 (582)
Q Consensus 304 e~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~~IL~~--~--l~~--gfd~~----------p---- 361 (582)
.||-..-=.+.+...+..|++.|+|.+|+++ |.+.+-.++-++. . ..+ |-+.. |
T Consensus 197 ----~Yyl~RSQPPlla~mV~~~~~~t~d~~~l~~~lp~L~~E~~~W~~~~~~v~i~~~~g~~~~L~rY~~~~~~PrpEs 272 (554)
T PLN02567 197 ----AYYTNRSQPPLLSAMVLAVYAATKDVELVRRALPALLKEHAFWTSGRHTVTIRDANGVVHVLSRYYAMWDKPRPES 272 (554)
T ss_pred ----ccccCCCCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhcCCcceeeecCCCCcCCCcccccCCCCCCCcc
Confidence 1455555668899999999999999999987 5555544442221 0 000 11100 0
Q ss_pred ----c--------------eec-----c----C-CCcccccc--c--cC--CCcceehhHHHHHHHHHHHHHHHhcCCCC
Q 007986 362 ----S--------------LLV-----T----D-GSCMIDRR--M--GI--HGHPLEIQALFYTALRCSREMLTVSDGSG 407 (582)
Q Consensus 362 ----~--------------Llv-----~----D-g~~WmD~r--~--gr--~G~pVEIQALwYnALr~aaeLa~~~g~~~ 407 (582)
. ++. . | .+-|+.-. + -+ .=.||..||+.|.+-+.+++|++.+|+
T Consensus 273 yreD~~~a~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~ti~t~~i~pVDLNa~L~~~e~~LA~la~~lG~-- 350 (554)
T PLN02567 273 SRIDKEVASKFSSSSEKQQLYRDIASAAESGWDFSSRWMRDGSNLTTLRTTSILPVDLNAFLLKMELDIAFFAKLLGD-- 350 (554)
T ss_pred ccccHHHHhcCCCchHHHHHHHHHHHHHHcCCCchhhhccccccccccccccccCccHHHHHHHHHHHHHHHHHHhCC--
Confidence 0 000 0 0 11232100 0 00 015799999999999999999999987
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCcc
Q 007986 408 SNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHM 487 (582)
Q Consensus 408 ~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~ 487 (582)
.+.++.+++++..++..|++.+|.+..++.-=| . +.... . ..+.-|- +.+...
T Consensus 351 -~~~a~~~~~~A~~~~~aI~~~lWdee~G~y~Dy--d-------------l~~~~----~----~~~~~~~---~~~~~~ 403 (554)
T PLN02567 351 -KATAERFLKAAKARKRAINAVLWNEEMGQWLDY--W-------------LPPNG----A----TCQESYT---WDAENQ 403 (554)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhcCcccCeEEee--c-------------ccccc----c----ccccccc---cccccc
Confidence 466777888899999999999998766542110 0 00000 0 0000000 001100
Q ss_pred ccccccccchhhhhcCCCCHH--HHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCC-CCc
Q 007986 488 DFRFFTLGNLWSIVSSLGTPK--QNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGG-SWP 564 (582)
Q Consensus 488 D~R~~alGNlLAI~~gLl~~e--qa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGg-vWP 564 (582)
. +.+...|.+-++.++++++ +++++++.+.+. .+..|.||.+- ...+..|=.|. +||
T Consensus 404 ~-~~~~~s~f~PLw~g~~~~~~~~a~~v~~~l~~~--~l~~pgGipts-----------------l~~sg~qWdgPn~W~ 463 (554)
T PLN02567 404 N-TNVYASNFVPLWCGVVPPGDAKVEKVVESLKSS--GLVLPAGIATS-----------------LRNTGQQWDFPNAWA 463 (554)
T ss_pred c-cCccHHHHHHHHcCCCChhhHHHHHHHHHHHhc--cCccCCcccCC-----------------CCCccccCCCCCcCH
Confidence 0 1334457777899999875 678899988763 67778888431 12234578899 999
Q ss_pred cchHHHHHHHHHHh
Q 007986 565 TLLWQVSSDIVTYI 578 (582)
Q Consensus 565 wLLg~y~~A~lk~~ 578 (582)
=+.|..+.++.++-
T Consensus 464 pl~~l~i~GL~~yG 477 (554)
T PLN02567 464 PLQHMIVEGLAASG 477 (554)
T ss_pred hHHHHHHHHHHHcC
Confidence 99999999988763
No 16
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]
Probab=99.04 E-value=6.5e-09 Score=119.80 Aligned_cols=261 Identities=20% Similarity=0.290 Sum_probs=178.9
Q ss_pred ccc-chhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccC
Q 007986 230 VFI-RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIG 308 (582)
Q Consensus 230 vfG-RD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~ 308 (582)
-|| ||..=-.+.+++. +|+.+|..+..++..|=. .|-.|.-| +|+.+..---
T Consensus 611 A~GfRD~~Qd~l~f~~~-~p~~aR~qIl~~as~Qf~----------eGd~~hWf----------------~p~t~ag~qi 663 (1056)
T COG3459 611 AFGFRDQLQDTLEFLLA-RPALARKQILDAASRQFV----------EGDVQHWF----------------LPDTYAGVQI 663 (1056)
T ss_pred eeccccccccchhhhhc-CHHHHHHHHHHHHhhccc----------CCCccccc----------------cccccccchh
Confidence 455 8988888888766 599999999877765433 34444444 2333211000
Q ss_pred ccCCCCcHHHHHHHHHHHHHHhCChhHHhh-------h--------------hHHHHHHHHHHHhhcCCCCCCCceeccC
Q 007986 309 RVAPVDSGLWWIILLRAYGKITGDYALQER-------V--------------DVQTGIKLIMNLCLADGFDMFPSLLVTD 367 (582)
Q Consensus 309 ~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~-------p--------------~vq~~L~~IL~~~l~~gfd~~p~Llv~D 367 (582)
+-..-|-.+|.+.++..|.+.|||.+++++ | +++++|+.++...-. ...|+++
T Consensus 664 r~~~sDdvvWl~~a~~~Yl~~TGD~aILdE~iPf~~~~~l~~~s~e~~TLyEH~~rAld~av~r~g~---~glpli~--- 737 (1056)
T COG3459 664 RTSISDDVVWLLKAIADYLKETGDAAILDEVIPFIDGPALPEFSKEQATLYEHCARALDLAVARLGP---HGLPLIL--- 737 (1056)
T ss_pred hcccCCceeeeHHHHHHHHHhcCcHhhhhccccccCCCccccccccchhHHHHHHHHHHHHHHhcCC---CCccccc---
Confidence 335678889999999999999999999876 2 344444544433321 2334333
Q ss_pred CCcccccc--cc--CCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhc
Q 007986 368 GSCMIDRR--MG--IHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRY 443 (582)
Q Consensus 368 g~~WmD~r--~g--r~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~ 443 (582)
|.+|=|.- ++ ..|.-|=+--+.+.+|+...+|++..++ .+.+.++.+-++++++.+..+=|.. +.||+
T Consensus 738 gGDWND~ln~vg~~g~geSv~lgW~l~~tlq~F~~lak~r~d---~~r~~~~~~~~ea~~~~~~~~~wDg-----~wy~r 809 (1056)
T COG3459 738 GGDWNDGLNLVGNGGKGESVWLGWFLALTLQTFKELAKARGD---EARADTWAKHVEALREALETNGWDG-----EWYRR 809 (1056)
T ss_pred CCcccccccccccCCccceeehhhHHHHHHHHHHHHHHhcCc---HHHHHHHHHHHHHHHHHHHhcCCCc-----ceEEe
Confidence 35565541 22 3356788888999999999999999877 6777888888889999988888862 12221
Q ss_pred cccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhh
Q 007986 444 KTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDD 523 (582)
Q Consensus 444 ~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~e 523 (582)
+|+ .+|-+| ..|..--++++++++.++++++..+++++++-|+.|++ .
T Consensus 810 ---~~~-----------------------d~g~~l---gs~e~~E~qI~~i~qs~sVlSg~gd~~ra~kaMd~v~k---~ 857 (1056)
T COG3459 810 ---GYG-----------------------DDGTPL---GSPEDEECQIDSIPQSWSVLSGEGDKERAEKAMDSVMK---Y 857 (1056)
T ss_pred ---ccc-----------------------cCCCcc---cCCCCcccceeeeccchhhhhCCCChHHHHHHHHHHHH---h
Confidence 111 122222 23555667789999999999999999999999999999 9
Q ss_pred hccCCCceecCCCC----CCCCceeeeCCCCCCCCCCCccCCCC
Q 007986 524 LVGHMPLKICYPAL----ESEDWRIITGSDPKNTPWSYHNGGSW 563 (582)
Q Consensus 524 Lltp~gLR~l~P~l----~d~~Wr~~~~gd~~nrp~SYHNGgvW 563 (582)
|+.|.|||.+.||. .+++|-..|.-.-+++-..|--.-.|
T Consensus 858 L~~pdgvrL~tppf~~~~~~~gyiK~y~pgvREnGgQYtHa~~w 901 (1056)
T COG3459 858 LVDPDGVRLFTPPFSYTKGDPGYIKRYPPGVRENGGQYTHAATW 901 (1056)
T ss_pred ccCccccEecCCcccccCCCCCeeecCCcccccccceeecccHH
Confidence 99999999999997 36777655553334444444333334
No 17
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 37 GH37 from CAZY comprises enzymes with only one known activity; trehalase (3.2.1.28 from EC). Trehalase is the enzyme responsible for the degradation of the disaccharide alpha,alpha-trehalose yielding two glucose subunits []. It is an enzyme found in a wide variety of organisms and whose sequence has been highly conserved throughout evolution.; GO: 0004555 alpha,alpha-trehalase activity, 0005991 trehalose metabolic process; PDB: 2JJB_B 2WYN_B 2JG0_A 2JF4_A 3C67_A 3D3I_B 3C69_A 3C68_A 2Z07_B.
Probab=98.86 E-value=1e-07 Score=105.89 Aligned_cols=259 Identities=15% Similarity=0.230 Sum_probs=158.4
Q ss_pred CCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCC
Q 007986 225 LNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGE 304 (582)
Q Consensus 225 ~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge 304 (582)
-+|+..+.=|+.-.++|+|..|..+.||+.++.++.+ ++ .-|.|||.-++
T Consensus 124 GRF~E~YyWDSYfi~~GLl~s~~~~~a~~mi~Nf~~~------i~----~yGfipNg~R~-------------------- 173 (512)
T PF01204_consen 124 GRFREMYYWDSYFIILGLLASGMYETAKGMIENFLYL------ID----RYGFIPNGNRT-------------------- 173 (512)
T ss_dssp TTB-S-BHHHHHHHHHHHHHTT-HHHHHHHHHHHHHH------HH----HHSS--SBSBG--------------------
T ss_pred CCcccchhHhHHHHHHHHHHcCCHHHHHHHHHHHHHH------HH----HhCcCCCCccH--------------------
Confidence 3799999999999999999999999999999988843 21 35899994422
Q ss_pred CccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHHHHHHHhhcC----------CC--------------C
Q 007986 305 SAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCLAD----------GF--------------D 358 (582)
Q Consensus 305 ~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~~IL~~~l~~----------gf--------------d 358 (582)
||-+=-=.+.+...+.+|++.|+|.+++++ |.+.+-..+ |+... ++ +
T Consensus 174 ----Yyl~RSQPPlla~mV~~~y~~t~d~~~l~~~lp~L~ke~~f---W~~~~r~~~~~~~~~~~~l~ry~~~~~~prpE 246 (512)
T PF01204_consen 174 ----YYLNRSQPPLLAQMVREYYEATKDKAFLREALPALEKEYEF---WMDNNRDVRVTGLGKGYGLNRYGDPWNSPRPE 246 (512)
T ss_dssp ----GGTT---S--HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH---HCCCEEETTEEEECTSEECCHHHHCHHCT-CC
T ss_pred ----HhccCCCCchHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH---HCCCCcceeecCCCccCCcccccCCCCCCcch
Confidence 233333347789999999999999999987 444443333 33100 00 0
Q ss_pred CCC--------------------ceec--cC----CCcccccc---------c-cCCCcceehhHHHHHHHHHHHHHHHh
Q 007986 359 MFP--------------------SLLV--TD----GSCMIDRR---------M-GIHGHPLEIQALFYTALRCSREMLTV 402 (582)
Q Consensus 359 ~~p--------------------~Llv--~D----g~~WmD~r---------~-gr~G~pVEIQALwYnALr~aaeLa~~ 402 (582)
.+. .+.- .+ .+-|+... + ...-.||..||+.|.+.+.+++|++.
T Consensus 247 sy~eD~~~a~~~~~~~~~~~~y~~i~saaESGwDfssRw~~~sg~d~~~l~~~~t~~iipVDLNa~L~~~e~~LA~~a~~ 326 (512)
T PF01204_consen 247 SYREDVETAENFPSERDKEELYRDIASAAESGWDFSSRWFRDSGFDNSNLFTIRTTDIIPVDLNAILYRNEKDLAEFAEL 326 (512)
T ss_dssp CCCHHHHHHHCHCHTSTCHHHHCHHHHHHHCCHHCTGGGBSSECCEE-TCHHCECCCEE-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHhhcccchHHHHhhcccchhhhhhhccceeeecCCCchhhhhccceeeecCchHHHHHHHHHHHHHHHHHH
Confidence 000 0000 01 13343110 0 01125899999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeeccc
Q 007986 403 SDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNL 482 (582)
Q Consensus 403 ~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v 482 (582)
+|+ .+.++.+.++++.+++.|++.||.+.+++.-=| +..
T Consensus 327 lG~---~~~a~~~~~~A~~~~~aI~~~lWdee~g~~~Dy--------------------------------------d~~ 365 (512)
T PF01204_consen 327 LGD---QEKAEEYRQRAEERKEAINQYLWDEEDGFYYDY--------------------------------------DLR 365 (512)
T ss_dssp TT----HHHHHHHHHHHHHHHHHHHHHTEETTTTEE--E--------------------------------------ETT
T ss_pred cCc---hhHHHHHHHHHHHHHHHHHHhCccCCCCeEEee--------------------------------------eCC
Confidence 987 678888999999999999999998765442100 011
Q ss_pred CCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCC-
Q 007986 483 QPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGG- 561 (582)
Q Consensus 483 ~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGg- 561 (582)
.... .+.+..-|.+-+++++++++|++++++.+.. .+.....+.. | .+.- .....+..|=.|.
T Consensus 366 ~~~~--~~~~~~a~f~PL~ag~a~~~qa~~~~~~~l~---~~~~~~~l~~--~-------~g~~--ts~~~~~~qWD~Pn 429 (512)
T PF01204_consen 366 TGKR--SPVFSPANFLPLWAGIASPEQAERLVARALD---YLERSGLLTF--P-------GGIP--TSLYDTGQQWDGPN 429 (512)
T ss_dssp TTEE--GG--BGGGGHHHHTT-S-HHHHHHHHHHHHH---HCTTCCSSC---C-------SECT--TCTTTTTSTTSTTE
T ss_pred CCCC--cccccHHHHHHHHHhhcCHhhhhhHHHHHHH---HHHhcCCccc--C-------CCCC--CccccccccCCCCC
Confidence 0111 1134556777889999999998888777776 4444333321 2 0111 1122255666677
Q ss_pred CCccchHHHHHHHHHH
Q 007986 562 SWPTLLWQVSSDIVTY 577 (582)
Q Consensus 562 vWPwLLg~y~~A~lk~ 577 (582)
+||=+.|+.+.++.|+
T Consensus 430 ~WaPlq~~~i~GL~~y 445 (512)
T PF01204_consen 430 VWAPLQWMAIEGLRRY 445 (512)
T ss_dssp EEHHHHHHHHHHHHHT
T ss_pred ccHhHHHHHHHHHHhC
Confidence 7999999999998886
No 18
>PRK13272 treA trehalase; Provisional
Probab=98.82 E-value=3.2e-07 Score=102.46 Aligned_cols=253 Identities=15% Similarity=0.190 Sum_probs=168.5
Q ss_pred CCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCC
Q 007986 224 PLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFG 303 (582)
Q Consensus 224 a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~G 303 (582)
.-+|+..+.=|+.-.++|+|.+|..++||+.++.++-+ + ..-|.|||.-++
T Consensus 155 GGRFrE~YYWDSY~i~~GLl~s~~~~~a~~mi~Nf~~~------i----~~yGfIPNG~R~------------------- 205 (542)
T PRK13272 155 GGRFREVYYWDSYFTMLGLVKSGQTTLSRQMLDNFAYL------I----DTYGHIPNGNRT------------------- 205 (542)
T ss_pred CCCccchhhhHHHHHHHhhhhcCcHHHHHHHHHHHHHH------H----HHcCcCcCCchh-------------------
Confidence 35799999999999999999999999999999988742 1 236899994322
Q ss_pred CCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh-hhHHHHHHHHHHHhhcC-----------------CCC--CC---
Q 007986 304 ESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER-VDVQTGIKLIMNLCLAD-----------------GFD--MF--- 360 (582)
Q Consensus 304 e~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~-p~vq~~L~~IL~~~l~~-----------------gfd--~~--- 360 (582)
||-+=-=.+.|.--+..|+..|||..+.+- |.+++-.+. |+... +.. .|
T Consensus 206 -----YYl~RSQPP~l~~Mv~~~~~~t~d~~~~~~lp~l~kEy~~---Wm~~~~~~~~~~~~~~~v~~~~g~~L~rY~~~ 277 (542)
T PRK13272 206 -----YYLSRSQPPFFSYMVELQAGVEGDAAYQRYLPQLQKEYAY---WMQGSDDLQPGQAARHVVRLADGSLLNRYWDE 277 (542)
T ss_pred -----ccccCCCchhHHHHHHHHHHhcChHHHHHHHHHHHHHHHH---HcCCCCCCCCccccceeEecCCCcchhhhcCC
Confidence 222222336677788999999999887432 444444432 22210 000 00
Q ss_pred ---C-------------------------ceecc-----C-CCcccc-cc-c----cCCCcceehhHHHHHHHHHHHHHH
Q 007986 361 ---P-------------------------SLLVT-----D-GSCMID-RR-M----GIHGHPLEIQALFYTALRCSREML 400 (582)
Q Consensus 361 ---p-------------------------~Llv~-----D-g~~WmD-~r-~----gr~G~pVEIQALwYnALr~aaeLa 400 (582)
| -|... | .+-|+. .. + ...=.||..|||.|.+-+..++++
T Consensus 278 ~~~PRpEsy~eD~~~a~~~~~~~~~~~Y~~l~a~aESGWDfSsRw~~~~~~L~~i~t~~IvpVDLNalL~~~e~~LA~~~ 357 (542)
T PRK13272 278 RDTPRPEAWLHDTRTAAEAKDRPAAEVYRDLRAGAESGWDYSSRWLADGKTLASIRTTAIVPVDLNSLLYHLERTLAQAC 357 (542)
T ss_pred CCCCCChHHHHHHHHhcCcccCcHHHHHHHHHHHHhcCCCchhhhccccccccccCcccccCccHHHHHHHHHHHHHHHH
Confidence 0 00000 0 012321 00 0 011148999999999999999999
Q ss_pred HhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeec
Q 007986 401 TVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIG 480 (582)
Q Consensus 401 ~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~ 480 (582)
+.+|+ .+.++.++++++.++..|++.+|.+ .++ |.+ ++
T Consensus 358 ~~lG~---~~~a~~~~~~A~~r~~aI~~~lWde-~G~---~~D-----------------------------------YD 395 (542)
T PRK13272 358 ASSGL---AACSQDYAALAQQRKQAIDAHLWNP-AGY---YAD-----------------------------------YD 395 (542)
T ss_pred HHhCC---hHHHHHHHHHHHHHHHHHHHhccCc-Cce---EEe-----------------------------------ec
Confidence 99886 4666778888889999999999975 332 110 01
Q ss_pred ccCCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccC
Q 007986 481 NLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNG 560 (582)
Q Consensus 481 ~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNG 560 (582)
.......+ .++..|.+-++.++++++|++++++.+.. .++.+.||-+..| .+..|=.|
T Consensus 396 ~~~~~~~~--~~s~a~f~PLwag~a~~~~a~~l~~~l~~---~~l~~gGlpTt~~-----------------~sgqQWD~ 453 (542)
T PRK13272 396 WQTRTLSE--QVTAAALYPLFAGLASDDRAKRTADSVRA---QLLRPGGLATTAL-----------------KTGQQWDE 453 (542)
T ss_pred cCCCCccc--cccHHHHHHHHcCCCCHHHHHHHHHHHHH---hccCCCCcCCCCC-----------------CccccCCC
Confidence 11111111 34566777889999999999999999986 5667888865554 12356777
Q ss_pred C-CCccchHHHHHHHHHH
Q 007986 561 G-SWPTLLWQVSSDIVTY 577 (582)
Q Consensus 561 g-vWPwLLg~y~~A~lk~ 577 (582)
. +||=+.|..+.++.++
T Consensus 454 PN~WaPlq~i~i~GL~~y 471 (542)
T PRK13272 454 PNGWAPLQWVAVDGLRRY 471 (542)
T ss_pred CCccHhHHHHHHHHHHHc
Confidence 8 8999999999998875
No 19
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=98.82 E-value=5.8e-07 Score=102.00 Aligned_cols=211 Identities=16% Similarity=0.069 Sum_probs=135.2
Q ss_pred HHHHHHHHHHHHhhhcccccCeeE-eccCCCCCC---CC-CCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhh
Q 007986 191 IEKEAWRLLQEAVVTYCESPIGTV-AANDPGDKQ---PL-NYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWE 265 (582)
Q Consensus 191 ~~~~A~~~Lr~~~v~~~~~p~Gtl-AA~~~~~~~---a~-nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~ 265 (582)
++.+....|+.. .-.|-|.+ ||.+.+-.+ .. -|+-+|+||+.++++|++..|..+.++.++.++...|...
T Consensus 245 ~~~rS~l~l~~~----~~~~~G~ivAs~t~~l~~~~~g~~dY~y~W~RD~~~~~~AL~~~G~~~~a~~~f~~l~~~~~~~ 320 (612)
T COG3387 245 ALYRSALVLKAL----NYNPTGAIVASPTTSLPELIGGTRDYRYVWPRDASYAALALLAIGYKKEALRFFEFLPDVQTPN 320 (612)
T ss_pred HHHHHHHHHHHc----ccCCCCcEEEcCCCCccccCCCCCCceEEccCcHHHHHHHHHHcCCHHHHHHHHHHHHHhhCCC
Confidence 455544444443 22344555 554322222 11 2889999999999999999999999999999999888765
Q ss_pred hhcc-cCCCCCCC-CCCceeeccccCCCccccccccCC-CCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHH
Q 007986 266 KTVD-CYSPGQGL-MPASFKVRNVPLESNKFEEVLDPD-FGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQ 342 (582)
Q Consensus 266 ~tld-~~~~~~Gl-iP~sfKI~h~~~r~~~ge~~l~pd-~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq 342 (582)
..+. .|. .+|- ++. .. .+- .++. .+---+|-+.|-.+++..|.+..+|.-+..+- .+
T Consensus 321 ~~~~~~y~-~~g~~~~~---------------~w-~~~~~~~~--~~pv~~~~~a~~~~~ld~~~~~~~~~~~~~~~-~~ 380 (612)
T COG3387 321 GKLYHKYS-IDGSDLAE---------------SW-LPVSGYYN--SFPVRIGNTALVQGALDVYGSIMNDIYFYAKY-YA 380 (612)
T ss_pred CceeeEEe-cCCCcccc---------------cc-ccccCCCC--CCceEEcchhhHHHHHHHHHHHHHHHHHHHhh-cc
Confidence 4211 111 1221 111 00 110 0111 12345788899999999999999997776551 12
Q ss_pred HHHHHHHHHhhcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 007986 343 TGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSAL 422 (582)
Q Consensus 343 ~~L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aL 422 (582)
..+....+++.. .-+....+..|+...|- .|.|+-.+..+--|.||.+++.||+..|+ .+.++.+.+.+..+
T Consensus 381 ~~~~~~~~~~~~-~~~~~~~~~~p~~~~WE----er~g~~~yt~~~~~agLd~A~~lA~~~gd---~~~a~~~~~~ad~i 452 (612)
T COG3387 381 IYILPAADYLRR-MEKIKANLPTPDFDLWE----ERGGHFTYTKATVYAGLDAAADLAEEFGD---KGSAEHWRKTADEL 452 (612)
T ss_pred hhhHHHHHHHHH-HHhhhcCCCCCccceec----ccCCcccchHHHHHHHHHHHHHHHHHhCC---cHHHHHHHHHHHHH
Confidence 222222222222 00111123346777884 45678889999999999999999999987 67888899999999
Q ss_pred HHHHHHhhhcc
Q 007986 423 SFHIREYYWVD 433 (582)
Q Consensus 423 k~~f~~~FWld 433 (582)
++.+.+.++..
T Consensus 453 k~~v~~~~~~~ 463 (612)
T COG3387 453 KEAVLRRGYAE 463 (612)
T ss_pred HHHHHHhcccc
Confidence 99988887653
No 20
>PRK13270 treF trehalase; Provisional
Probab=98.69 E-value=2.8e-06 Score=95.26 Aligned_cols=250 Identities=12% Similarity=0.216 Sum_probs=161.8
Q ss_pred CCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCC
Q 007986 225 LNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGE 304 (582)
Q Consensus 225 ~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge 304 (582)
-+|+..+.=|+.-.++|+|.+|..++||+.++-++-+ + ..-|.|||.-++
T Consensus 167 GRFrE~YYWDSYwi~~GLl~sg~~~~a~~mi~Nf~~l------i----~~yGfIPNG~R~-------------------- 216 (549)
T PRK13270 167 GRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWM------I----ENYGHIPNGNRT-------------------- 216 (549)
T ss_pred CCcccchhhhHHHHHHHhhhcCcHHHHHHHHHHHHHH------H----HHcCcCcCCchh--------------------
Confidence 4799999999999999999999999999999988742 1 236899994322
Q ss_pred CccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHHHHHHHhhc-----------------CCC--CCC---
Q 007986 305 SAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCLA-----------------DGF--DMF--- 360 (582)
Q Consensus 305 ~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~~IL~~~l~-----------------~gf--d~~--- 360 (582)
||-+=-=.+.|...+..|.+ .|.+++++ |.+++-... |+.. ++. .-|
T Consensus 217 ----YYl~RSQPP~l~~Mv~~y~~--~~~~~~~~~lp~l~~E~~f---Wm~~~~~~~~~~~~~~~v~~~~g~~L~rY~~~ 287 (549)
T PRK13270 217 ----YYLSRSQPPVFALMVELFEE--DGVRGARRYLDHLKMEYAF---WMDGAESLIPNQAYRHVVRMPDGSLLNRYWDD 287 (549)
T ss_pred ----ccccCCCCHhHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH---HcCCCCccCcccccceeEecCCCCccccccCC
Confidence 22222222445566777766 45677665 444443332 2211 000 000
Q ss_pred ---C--------c----------------eecc-----C-CCcccccc--c--c--CCCcceehhHHHHHHHHHHHHHHH
Q 007986 361 ---P--------S----------------LLVT-----D-GSCMIDRR--M--G--IHGHPLEIQALFYTALRCSREMLT 401 (582)
Q Consensus 361 ---p--------~----------------Llv~-----D-g~~WmD~r--~--g--r~G~pVEIQALwYnALr~aaeLa~ 401 (582)
| . +... | .+-|+.-. + - ..=.||..||+.|.+-+..++|++
T Consensus 288 ~~~PRpEsyreD~~~a~~~~rp~~~~Y~~lra~aESGWDfSsRW~~~~~~L~~i~T~~iipVDLNaiL~~~e~~LA~~a~ 367 (549)
T PRK13270 288 RDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRDTGRLASIRTTQFIPIDLNAFLYKLESAIANISA 367 (549)
T ss_pred CCCCCCchhHHHHHhhcccCCchHHHHHHHHHHHHcCCCchhhcccCCcccccccccCcchhhHHHHHHHHHHHHHHHHH
Confidence 0 0 0000 0 01122100 0 0 011589999999999999999999
Q ss_pred hcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecc
Q 007986 402 VSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGN 481 (582)
Q Consensus 402 ~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~ 481 (582)
.+|+ .+-++.++++++.+++.|++.+|.+..++ |+.=+
T Consensus 368 ~lG~---~~~a~~~~~~A~~r~~AI~~~LWnee~G~---------------------------------------~~DYD 405 (549)
T PRK13270 368 LKGE---KETEALFRQKASARRDAVNRYLWDDENGI---------------------------------------YRDYD 405 (549)
T ss_pred HhCC---hHHHHHHHHHHHHHHHHHHHhccCcccCe---------------------------------------EEecc
Confidence 9987 46677788899999999999999765433 11111
Q ss_pred cCCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCC
Q 007986 482 LQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGG 561 (582)
Q Consensus 482 v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGg 561 (582)
++.... +.++..|.+-++.++++++|++++++.+.. .++.+-|+-+. ...+..|=.|.
T Consensus 406 ~~~~~~--~~~s~a~f~PLwaG~a~~~qa~~l~~~l~~---~ll~pGGl~tS-----------------~~~sgqQWD~P 463 (549)
T PRK13270 406 WRREQL--ALFSAAAIVPLYVGMANHEQADRLANAVRS---RLLTPGGILAS-----------------EYETGEQWDKP 463 (549)
T ss_pred cccCcc--ccccHHHHHHHHhCCCCHHHHHHHHHHHHH---hcccCCCcCCC-----------------CCCCcccCCCC
Confidence 111111 235667788889999999999999999876 56666666221 12234566777
Q ss_pred -CCccchHHHHHHHHHH
Q 007986 562 -SWPTLLWQVSSDIVTY 577 (582)
Q Consensus 562 -vWPwLLg~y~~A~lk~ 577 (582)
+||=+.|..+.++.++
T Consensus 464 N~WaPlqwmiieGL~ry 480 (549)
T PRK13270 464 NGWAPLQWMAIQGFKMY 480 (549)
T ss_pred CCCccHHHHHHHHHHHc
Confidence 7999999999998876
No 21
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well.
Probab=98.57 E-value=2.5e-05 Score=89.47 Aligned_cols=197 Identities=16% Similarity=0.157 Sum_probs=130.3
Q ss_pred CcchHHHHHHHHHHHHHhhhcccccCee-EeccCCC---C-CCCCC--CCCcccchhHHHHHHHHhcCChHHHHHHHHHH
Q 007986 186 REETEIEKEAWRLLQEAVVTYCESPIGT-VAANDPG---D-KQPLN--YDQVFIRDFVPSALAFLLKGEGEIVRNFLLHT 258 (582)
Q Consensus 186 ~~~~~~~~~A~~~Lr~~~v~~~~~p~Gt-lAA~~~~---~-~~a~n--Y~~vfGRD~~IS~lglL~~G~pEiar~~L~~l 258 (582)
.+-.+++.++.-.|+...- .++-|- |||...+ . .+..| |.-||.||+..++.+|+..|..+.++.++.+|
T Consensus 247 ~~~~~~~~rS~lvLK~~~d---~~~~GAiIAA~Tts~pe~~g~~~n~dYryvW~RD~a~~a~AL~~~G~~~~a~~~~~~l 323 (648)
T TIGR01535 247 GKGNSLYYVSMMILKAHED---KTNPGAYIASLSIPWGDGQADDNTGGYHLVWPRDLYQVANAFLAAGDVDSALRSLDYL 323 (648)
T ss_pred chHHHHHHHHHHHHHHhcC---CCCCCcEEEecCCCCCccCCCCCCCceEEEehhhHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3455677777777777521 324454 5665221 1 22233 99999999999999999999999999999999
Q ss_pred HhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh
Q 007986 259 LQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER 338 (582)
Q Consensus 259 a~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~ 338 (582)
.+.|.. .|..|....| +|+ +.-.+ -..|-+=..|++++.+.+. +..+
T Consensus 324 ~~~~~~----------~G~~lq~y~v--------dG~----~~~~~------iQlD~~g~~i~~~~~l~~~--~~~~--- 370 (648)
T TIGR01535 324 AKVQQD----------NGMFPQNSWV--------DGK----PYWTG------IQLDETAFPILLAYRLHRY--DHAF--- 370 (648)
T ss_pred HHHhcc----------CCCcCceecc--------CCC----CCCCC------ccccHHHHHHHHHHHHHHc--CcHH---
Confidence 987662 3433332211 133 11111 4567666677778766653 2211
Q ss_pred hhHHHHHHHHHHHhhcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 007986 339 VDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNR 418 (582)
Q Consensus 339 p~vq~~L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~r 418 (582)
+.+.++.+.+++...| | .++-..|- -|.|+--..-|-.|.||.++++|++..|+ .+.++++.+.
T Consensus 371 --~~~~vk~aadfl~~~~----p---~p~~d~WE----er~g~~~~T~a~v~aaL~~Aa~iA~~~g~---~~~a~~w~~~ 434 (648)
T TIGR01535 371 --YDKMLKPAADFIVKNG----P---KTGQERWE----EIGGYSPSTLAAEIAGLTAAADIAEQNGD---AGSAQKYRET 434 (648)
T ss_pred --HHHHHHHHHHHHHHcC----C---CCCCCccc----ccCCcCchhHHHHHHHHHHHHHHHHHcCC---cHHHHHHHHH
Confidence 2333444444444322 2 34555674 25576667777778999999999999987 4678889999
Q ss_pred HHHHHHHHHHhhhcch
Q 007986 419 LSALSFHIREYYWVDM 434 (582)
Q Consensus 419 a~aLk~~f~~~FWld~ 434 (582)
++.+++.+.+..|.+.
T Consensus 435 Ad~i~~~i~~~~~~~~ 450 (648)
T TIGR01535 435 ADNWQKLIENWTFTTN 450 (648)
T ss_pred HHHHHHHHHHhCcCCC
Confidence 9999999999999865
No 22
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63 (GH63 from CAZY). They catalyse the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase 3.2.1.106 from EC is the first enzyme in the N-linked oligosaccharide processing pathway. ; GO: 0004573 mannosyl-oligosaccharide glucosidase activity, 0009311 oligosaccharide metabolic process
Probab=98.06 E-value=5.5e-05 Score=88.55 Aligned_cols=171 Identities=9% Similarity=0.107 Sum_probs=96.6
Q ss_pred eehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhh-hhhhccccccccccccccCCCCC
Q 007986 383 LEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKIN-EIYRYKTEEYSTDATNKFNIYPE 461 (582)
Q Consensus 383 VEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~-~iyr~~te~y~~~a~n~fni~p~ 461 (582)
|.-.+..+.+-+.|++||..++.. +-+....+.+..|+..+++.-|.+..+++ ++-++ ++ .-.+......+.
T Consensus 558 vDl~sWMa~~a~~M~~IA~~L~~~---d~~~ef~~~~~~i~~~l~~~hWdeedgfYyD~~~~-~~---~v~l~~~~~~~~ 630 (801)
T PF03200_consen 558 VDLTSWMAFFALNMARIALELGKE---DDAYEFFEHFEYISDALNKLHWDEEDGFYYDVGLH-PD---AVRLEWKEVLEN 630 (801)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCc---ccHHHHHHHHHHHHHHHHHhcCCcccCceeeeccc-cc---cceecccccccc
Confidence 445566667778889999988762 11222445666778888999999887642 22111 11 000000000000
Q ss_pred C-ccccccccccCCCceeecccCCCcccccccccc--chhhhhcCCCCH--HHHHHHHHHHHhhhhhhccCCCceecCCC
Q 007986 462 Q-IPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLG--NLWSIVSSLGTP--KQNESILNLIEAKWDDLVGHMPLKICYPA 536 (582)
Q Consensus 462 ~-ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alG--NlLAI~~gLl~~--eqa~~Ild~i~~~w~eLltp~gLR~l~P~ 536 (582)
. .+.-+.......+-. ..| ...| ++.-++.+++++ ++.++|++.+... +++.+|+|||+|+.
T Consensus 631 ~~~~~~~~r~~~~~~~~--~~v---------~~~Gyvsl~Plll~ll~~ds~~L~~~L~~l~D~-~ef~s~yGirSLSk- 697 (801)
T PF03200_consen 631 GQFRRELVRVVRGEPQL--QLV---------CHFGYVSLFPLLLGLLPPDSERLERLLERLLDE-DEFWSPYGIRSLSK- 697 (801)
T ss_pred cccchhheecccCCccc--cce---------eeecccCCCchhhccCCCCHHHHHHHHHHhcCh-hhccCCCCCccccC-
Confidence 0 000000000000000 000 1111 333356677654 5778899998843 49999999999998
Q ss_pred CCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHHh
Q 007986 537 LESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTYI 578 (582)
Q Consensus 537 l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~~ 578 (582)
.++-|.. +....+.+|=.|.||.=+....+.|+.+|-
T Consensus 698 -~~~~y~~----~~~e~d~~YWRGpIW~~~NyL~i~aL~~y~ 734 (801)
T PF03200_consen 698 -SDPFYGP----GENEHDPSYWRGPIWIPINYLLIEALRRYG 734 (801)
T ss_pred -CCccccc----cCCccCCCcccCccchhhHHHHHHHHHHHh
Confidence 6665432 112234589999999999999999998874
No 23
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]
Probab=97.66 E-value=0.0027 Score=70.93 Aligned_cols=135 Identities=21% Similarity=0.431 Sum_probs=97.9
Q ss_pred cceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCC
Q 007986 381 HPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYP 460 (582)
Q Consensus 381 ~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p 460 (582)
.|++-|++.|.-....+.+....++ .+.++.+++++.+-+.+|++++|.++.+.+.=|-.+
T Consensus 352 ~p~dlna~~y~~e~~~~~~~~~~~~---~~~~e~~~~~A~~R~~aI~~ylW~~e~G~~~DYd~k---------------- 412 (558)
T COG1626 352 LPVDLNALLYKLEEIIANISAIKGD---KETAERYQRKAEARRCAINKYLWDDEAGQYNDYDWK---------------- 412 (558)
T ss_pred chhhhhhHHHHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHccccccceeehhhhh----------------
Confidence 5799999999999999999888765 677788888888889999999999866542111100
Q ss_pred CCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCC
Q 007986 461 EQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESE 540 (582)
Q Consensus 461 ~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~ 540 (582)
++. ..+ .....+..+++.|+++++|++.+++.+.. .|..|=||-++.| ++
T Consensus 413 --------------~~~--------~~~--y~~a~~~~plw~G~a~~era~~~a~~~~~---~l~~pGGl~ast~--~s- 462 (558)
T COG1626 413 --------------LKK--------RRA--YLSAAALWPLWVGLATPERAQRLADAALS---MLEQPGGLSASTP--RS- 462 (558)
T ss_pred --------------ccc--------ccc--ccchhhhhhccCCCCCHHHHHHHHHHHHH---HhcCCCceecccc--cc-
Confidence 000 000 13334667899999999999999999998 8999999988887 22
Q ss_pred CceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHH
Q 007986 541 DWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTY 577 (582)
Q Consensus 541 ~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~ 577 (582)
-+-|=|=|| |+=|.|.-+...-||
T Consensus 463 -----------~~QWD~PNg--WaPlq~ia~~gL~ry 486 (558)
T COG1626 463 -----------GQQWDYPNG--WAPLQWIATQGLKRY 486 (558)
T ss_pred -----------cccccCCCC--CccHHHHHHHHHHHH
Confidence 445666676 766666555555544
No 24
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 15 GH15 from CAZY comprises enzymes with several known activities; glucoamylase (3.2.1.3 from EC); alpha-glucosidase (3.2.1.20 from EC); glucodextranase (3.2.1.70 from EC). Glucoamylase (GA) catalyses the release of D-glucose from the non-reducing ends of starch and other oligo- or poly-saccharides. Studies of fungal GA have indicated 3 closely-clustered acidic residues that play a role in the catalytic mechanism []. This region is also conserved in a recently sequenced bacterial GA []. The 3D structure of the pseudo-tetrasaccharide acarbose complexed with glucoamylase II(471) from Aspergillus awamori var. X100 has been determined to 2.4A resolution []. The protein belongs to the mainly-alpha class, and contains 19 helices and 9 strands. This protein is found in higher organisms, and is represented by phosphorylase kinase subunits.; GO: 0004339 glucan 1,4-alpha-glucosidase activity, 0005976 polysaccharide metabolic process; PDB: 1GAI_A 1GAH_A 1LF6_B 1LF9_A 3EQA_A 1AYX_A 2F6D_A 2FBA_A 1DOG_A 1GLM_A ....
Probab=97.44 E-value=0.018 Score=62.95 Aligned_cols=184 Identities=15% Similarity=0.089 Sum_probs=98.3
Q ss_pred CeeE-eccCCCCCCCCCCCCcccchhHHHHHHHHhcCChHHHH---------------HHHHHHHhhhhhhhhcccCCCC
Q 007986 211 IGTV-AANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVR---------------NFLLHTLQLQSWEKTVDCYSPG 274 (582)
Q Consensus 211 ~Gtl-AA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~pEiar---------------~~L~~la~lQs~~~tld~~~~~ 274 (582)
-|.+ ||... ..+.|.-+|.||+.+++-+++..|..+.++ ++|..+..+|+....+...+
T Consensus 23 ~GaiiAsps~---s~pdY~y~W~RD~a~~~~al~~~g~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-- 97 (448)
T PF00723_consen 23 TGAIIASPST---SLPDYRYCWVRDAAYTAYALWALGYRDEARAFFYELEQSLVKLMRGYLQPMYRQQGKVNPSGEFQ-- 97 (448)
T ss_dssp TT-B-S-SSB---SSSBTCSEEHHHHHHHHHHHHHHT-H--HHHHHTTT-HHHHHHHHHHHHHHHHHHTS-BTTB-TT--
T ss_pred CCeEEeeccc---CCCCCceeecccHHHHHHHHHHhhhhHHHHHHHhhhhHhhhhhhhhhhhhhhhhcCccCCCcccc--
Confidence 5666 55432 335899999999999999988666433332 34444444444422111111
Q ss_pred CCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh-hhHHHHHHHHHHHhh
Q 007986 275 QGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER-VDVQTGIKLIMNLCL 353 (582)
Q Consensus 275 ~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~-p~vq~~L~~IL~~~l 353 (582)
.|. -+|++--...|. +-.|..+ +.---.|.+-.+++++.+|.+ .| ..+... ..+ +.|+..++++.
T Consensus 98 ---~~~---~L~~~~~~~~~~----~~~g~~~-w~~~Q~D~~gl~l~~l~~~~~-~g-~~~~~~~~~~-~~I~~~~~yi~ 163 (448)
T PF00723_consen 98 ---SPE---GLHEPGYNVSGP----VRVGNPA-WGRPQNDGPGLRLLALWQYID-SG-LQIIYTYWEV-SFIKNDLDYIE 163 (448)
T ss_dssp ---TTG---GGGTTEEETTSE----BTTS-B--ES--BTHHHHHHHHHHHHHHH-TT-HHHHHTHHHH-HTHHHHHHHHH
T ss_pred ---Ccc---ccccceecCCCC----cccCchh-ccCcCCCchHHHHHHHHHHHH-cC-CCcccccchh-HHHHHHHHHHH
Confidence 110 022110000011 1112211 112478999999999999932 23 344333 111 23555555554
Q ss_pred cCCCCCCCceeccCCCccccccccCCCccee--hhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHH
Q 007986 354 ADGFDMFPSLLVTDGSCMIDRRMGIHGHPLE--IQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIR 427 (582)
Q Consensus 354 ~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVE--IQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~ 427 (582)
..+ + .||-..|- -+.|..-. -.+--+.||..++++++..|+ ...++++.+.+..+++.+.
T Consensus 164 ~~w----~---~pd~dlWE----e~~g~~~f~~S~~~~~~AL~~a~~~a~~~g~---~~~~~~~~~~a~~i~~~l~ 225 (448)
T PF00723_consen 164 RNW----R---EPDFDLWE----ERNGIHFFTASSAMQWAALLRAANLAELFGD---PGDAERWRETADEIRERLE 225 (448)
T ss_dssp HHT----T---SBEE-TTS----S-EEEEHH--HHHHHHHHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHH
T ss_pred HHc----C---CcCCcccc----ccCCCCccchhHHHHHHHHHHHHHHHHHcCC---chHHHHHHHHHHHHHHHhh
Confidence 322 1 12333553 24454444 677789999999999999986 6677788888888888884
No 25
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2P0V_B 3QSP_B 3QPF_A 3QRY_A 3ON6_A 3QT9_A 3QT3_A 2NVP_A 3P2C_B.
Probab=97.27 E-value=0.0023 Score=70.09 Aligned_cols=224 Identities=19% Similarity=0.228 Sum_probs=134.7
Q ss_pred cccCeeEeccCCCCCCCCCCCCcccchhHHHHHHH--HhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCC-----
Q 007986 208 ESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAF--LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPA----- 280 (582)
Q Consensus 208 ~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lgl--L~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~----- 280 (582)
..+.-+|..+| =..-|-||+.--+.-. |+..+++++ ..++-+.+.|..--..|+|. +...|.
T Consensus 30 ~~~~tFViTGD--------IpAmWLRDS~~Q~~pYl~l~~~d~~l~-~li~G~I~rQa~~I~~dPYa--NAF~~~~~s~~ 98 (424)
T PF06824_consen 30 EDPDTFVITGD--------IPAMWLRDSAAQLRPYLPLAKEDPSLA-RLIRGVINRQARYILIDPYA--NAFNPPPESGI 98 (424)
T ss_dssp STSEEEE-SBS--------SSSEEHHHHHHHCGGGGGGGCC-HHHH-HHHHHHHHHHHHHHHH-TT---SEEESS-----
T ss_pred CCCCeEEEecC--------chhhhccccHhHHHHHHHHhcCCHHHH-HHHHHHHHHHHHHHhcchhh--cccCCcccccc
Confidence 44555667776 2378999987665554 456566554 46777888899888888886 332222
Q ss_pred --ceeeccccCCCccccccccCCC-CCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhhcC-C
Q 007986 281 --SFKVRNVPLESNKFEEVLDPDF-GESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLAD-G 356 (582)
Q Consensus 281 --sfKI~h~~~r~~~ge~~l~pd~-Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l~~-g 356 (582)
+.. .|. ..+.+.+.+ +...+.+=--+||.-.||-+.+.|++.|||.+++.+. +.+|++.|++-...+ .
T Consensus 99 ~~~~~-~~~------~~D~~~~~~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~~-~~~A~~~il~~~~~eq~ 170 (424)
T PF06824_consen 99 PPNGN-GHW------QSDTTEMPYDPPWVWERKYELDSLCYFLQLAYQYWKATGDTSFFDED-WLRAVRLILDTWRTEQR 170 (424)
T ss_dssp TSS-T-SGC------CGSBS------TTEEE----HHHHHHHHHHHHHHHHHH--GTTSSHH-HHHHHHHHHHHHHHTTG
T ss_pred ccccc-CCC------CCCccCCCcCCCceeeecchhhhhhHHHHHHHHHHHhhCChhhhhHH-HHHHHHHHHHHHHHHHH
Confidence 100 000 011111111 1111223346999999999999999999999999875 899999998765521 1
Q ss_pred --CCC----------C--------Ccee-------c-cCCCcccccc----ccCCCcceehhHHHHHHHHHHHHHHHhcC
Q 007986 357 --FDM----------F--------PSLL-------V-TDGSCMIDRR----MGIHGHPLEIQALFYTALRCSREMLTVSD 404 (582)
Q Consensus 357 --fd~----------~--------p~Ll-------v-~Dg~~WmD~r----~gr~G~pVEIQALwYnALr~aaeLa~~~g 404 (582)
++. | ++|. + .-|..|--=| --.+||.+--|++.--+|+.+++|+....
T Consensus 171 ~t~~~~~~~~~s~Y~F~R~~~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~y~yliPsNm~a~v~L~~laei~~~~~ 250 (424)
T PF06824_consen 171 PTYDEDHEGLPSPYRFQRPTCRPTDTLPNDGRGNPVAYTGLIWSGFRPSDDACIYPYLIPSNMFAVVALEYLAEILRALG 250 (424)
T ss_dssp ------SSSCS-S---BESBSSGGGS-HHHHT-S----SSS-B-SB-TTSSB-SSSEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhccccccCCCcceeeccCCCCCccccCCCcCCcCCCCCceecCcCCCCcchhcCcCChHHHHHHHHHHHHHHHHHHhc
Confidence 110 0 0111 0 1123332111 12678999999999999999999999875
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhcccccccc
Q 007986 405 GSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYST 450 (582)
Q Consensus 405 ~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~ 450 (582)
..+..++++++++-++.++..|.++--++..+...||.|..+.||.
T Consensus 251 ~~~~~~la~~~~~la~eI~~gI~~~giv~h~~~g~iyAYEVDG~G~ 296 (424)
T PF06824_consen 251 WDDSAELAERARALADEIRAGIEKHGIVEHPKFGKIYAYEVDGFGN 296 (424)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEE-SEE-SSS-
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHheEEeCCCCCeEEEEEecCCCC
Confidence 4111368888888888889999999888877777888888888876
No 26
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=97.05 E-value=0.029 Score=63.35 Aligned_cols=80 Identities=23% Similarity=0.202 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhh--cCCCCCCCceeccCCCcccccc---ccCCCcceehhHHHHHHH
Q 007986 319 WIILLRAYGKITGDYALQERVDVQTGIKLIMNLCL--ADGFDMFPSLLVTDGSCMIDRR---MGIHGHPLEIQALFYTAL 393 (582)
Q Consensus 319 fIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l--~~gfd~~p~Llv~Dg~~WmD~r---~gr~G~pVEIQALwYnAL 393 (582)
|+.+++++++.|+|.+|+++ +-..+..+++|+. .+..|.-|-+ +.-||-. .-..||--+.-.||-.||
T Consensus 447 fVLlvYrdf~~T~D~eFL~e--~y~~iv~~iD~~~~~d~d~DgiP~~-----~g~~d~~fDa~~i~G~ssy~~sl~iaal 519 (721)
T COG4354 447 FVLLVYRDFKFTNDREFLKE--VYPVIVEAIDWLKRFDQDNDGIPEN-----SGAMDNTFDATRIQGHSSYCGSLFIAAL 519 (721)
T ss_pred EEeeehhhhhhcccHHHHHH--HHHHHHHHHHHHHhhcccCCCCCcc-----cCCcccccccceeechhhhhhHHHHHHH
Confidence 68899999999999999999 4444444444442 1111222211 1112221 235699999999999999
Q ss_pred HHHHHHHHhcCC
Q 007986 394 RCSREMLTVSDG 405 (582)
Q Consensus 394 r~aaeLa~~~g~ 405 (582)
-++.+|++.+++
T Consensus 520 ~A~l~is~~l~~ 531 (721)
T COG4354 520 IAALEISKYLLD 531 (721)
T ss_pred HHHHHHHHHHhh
Confidence 999999988765
No 27
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]
Probab=96.43 E-value=0.17 Score=57.82 Aligned_cols=184 Identities=14% Similarity=0.131 Sum_probs=116.6
Q ss_pred eccCCCCCCCCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccc
Q 007986 215 AANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKF 294 (582)
Q Consensus 215 AA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~g 294 (582)
-..-|-....-+|...++=|+.--..|+|.++..+.||+.++.+..+ ++ ..|.|||.-++
T Consensus 171 ~v~~PfiVPGgRF~E~YyWDsywii~GLl~S~m~~takGmieNf~~l------V~----~yG~ipNg~R~---------- 230 (600)
T KOG0602|consen 171 PVPNPFIVPGGRFRELYYWDSYWIIKGLLASQMFDTAKGMIENFISL------VD----TYGFIPNGGRV---------- 230 (600)
T ss_pred cCCCceeccCCceeeeecccHHHHHHhHHhhcccHHHHHHHHHHHHH------HH----hcCcccCCCee----------
Confidence 34433334456899999999999999999999999999998876632 22 35789984321
Q ss_pred cccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHH-HHHHHhh--cCC---CC--------
Q 007986 295 EEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIK-LIMNLCL--ADG---FD-------- 358 (582)
Q Consensus 295 e~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~-~IL~~~l--~~g---fd-------- 358 (582)
||-+=-=.+.+..-+.+|++.|+|.+|+.+ +.++.-+. |.-+-++ .++ +.
T Consensus 231 --------------YYl~RSQPPllt~Mv~~~y~~t~~~~~~~~~l~tl~kEy~fw~~~~~~~~~~~~~~l~~y~~~~~~ 296 (600)
T KOG0602|consen 231 --------------YYLNRSQPPLLTGMVYEYYEATNDEQFLKRALPTLIKEYEFWTNNRTEDVKDEGKVLSRYRVMGSG 296 (600)
T ss_pred --------------eeeccCCCchhhhhHHHhhhccCcHHHHHHHHHHHhhheecccCCCccccccCCceeEEEeccCCC
Confidence 222222235577778999999999999877 33333333 1111011 000 00
Q ss_pred ----CC----------Cc----------eeccC--C----Ccccccccc--CC-----CcceehhHHHHHHHHHHHHHHH
Q 007986 359 ----MF----------PS----------LLVTD--G----SCMIDRRMG--IH-----GHPLEIQALFYTALRCSREMLT 401 (582)
Q Consensus 359 ----~~----------p~----------Llv~D--g----~~WmD~r~g--r~-----G~pVEIQALwYnALr~aaeLa~ 401 (582)
++ ++ +..+. | +-|+-.+ + .. =.||-.|+|.++.++.++.+..
T Consensus 297 prPEsy~~d~e~~e~~~t~~~~~~~~~~l~~~aesg~DfSsrw~~~~-~t~~~~~t~~~vpvDLN~~~~~~~~i~~y~~~ 375 (600)
T KOG0602|consen 297 PRPESYREDFETAEHLKTEKEKQQLYQDLAAAAESGWDFSSRWFAVN-GTLSSIGTTDLVPVDLNLLYKWNADIMKYFYV 375 (600)
T ss_pred CCCcchHHHHHHHhcccchHHHHHHHHHHhhcCcccchhHHHhhccC-CcccccccccccccchHHHHHhhHHHHhhhcc
Confidence 00 00 00100 1 1232110 1 01 1689999999999999999988
Q ss_pred hcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhh
Q 007986 402 VSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKK 436 (582)
Q Consensus 402 ~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~ 436 (582)
..|+ .+-++.++++.++++..|++.+|.|..+
T Consensus 376 ~~Gd---~~~s~~~~~k~~~r~~~i~~vlWde~~g 407 (600)
T KOG0602|consen 376 VDGD---PKDSAQFEKKSEQRRAAIQEVLWDEEDG 407 (600)
T ss_pred cCCC---hhHHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 8886 4566777888888999999999987543
No 28
>COG3538 Uncharacterized conserved protein [Function unknown]
Probab=95.03 E-value=1.7 Score=47.25 Aligned_cols=207 Identities=18% Similarity=0.222 Sum_probs=131.0
Q ss_pred CcccchhHHHHHHH--HhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCc
Q 007986 229 QVFIRDFVPSALAF--LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESA 306 (582)
Q Consensus 229 ~vfGRD~~IS~lgl--L~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~ 306 (582)
+-|-||+.--+.-. |+.-++++ |..+.-+.+.|..--..|+|. +..-+..+.-.|+. + ...+-|-.+|
T Consensus 60 AmWLRDStaQvrPYL~lAkeD~~l-~~li~GlvkrQ~~~i~~DPYA--NAFn~~~n~~Ghq~-D----~T~m~~~vwE-- 129 (434)
T COG3538 60 AMWLRDSTAQVRPYLPLAKEDEEL-RRLIAGLVKRQARYILLDPYA--NAFNETANGAGHQT-D----HTEMNPWVWE-- 129 (434)
T ss_pred HHHHhcchhhhccceeecccCHHH-HHHHHHHHHHHHHHhhcChhh--hhcccccccCCccc-C----cccccchhhe--
Confidence 78999998766664 35545555 456667888888877778885 33333322222311 0 0001111122
Q ss_pred cCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhh-cCCCC--C-----------CCcee--------
Q 007986 307 IGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCL-ADGFD--M-----------FPSLL-------- 364 (582)
Q Consensus 307 i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l-~~gfd--~-----------~p~Ll-------- 364 (582)
+---+|+--..|-+.+.|++.|||.+-..+ .+.++++.|++... .+... . .++|.
T Consensus 130 --RKYEiDSLCYPiqLAYl~wk~Tg~t~~Fde-~f~~a~~~il~~~~~eQ~h~~~spY~F~R~t~r~~dTL~~~G~G~~~ 206 (434)
T COG3538 130 --RKYEIDSLCYPIQLAYLYWKATGDTSQFDE-DFRQAVETILRVWKVEQDHETDSPYRFERDTDRKSDTLGRAGKGAPT 206 (434)
T ss_pred --eeeeccchhhHHHHHHHHHHhcCCccccCH-HHHHHHHHHHHHHhHhhccCCCCCeeeeccccccchhhhhCCCCCCc
Confidence 445699999999999999999999876553 47788888876433 11111 0 01111
Q ss_pred ccCCCcccccc----ccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhh
Q 007986 365 VTDGSCMIDRR----MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEI 440 (582)
Q Consensus 365 v~Dg~~WmD~r----~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~i 440 (582)
.+.|.+|--=| -=.+||.|=-|..--=.|..+.+|+...-. .+++++....-..++++-|.++=-++.-+...|
T Consensus 207 a~tGM~wSgFRPSDDAC~YgYliPsNmFaVVvl~y~~ei~~~~~~--~~~~a~~a~~L~~eIq~Gi~~~g~~~~~~~~~i 284 (434)
T COG3538 207 APTGMTWSGFRPSDDACEYGYLIPSNMFAVVVLSYLQEILEALPH--DAEIARQAKELANEIQQGIEQFGKMDHPKGGEI 284 (434)
T ss_pred CcccceecCcCCCccchhcccccccchhhhhhHHHHHHHHHHccc--cHHHHHHHHHHHHHHHHHHHHhceecCCCCCee
Confidence 23345554211 125789999999999999999999986533 367776655555556667766655666677889
Q ss_pred hhcccccccc
Q 007986 441 YRYKTEEYST 450 (582)
Q Consensus 441 yr~~te~y~~ 450 (582)
|.|..+.+|+
T Consensus 285 yAyEVDG~Gn 294 (434)
T COG3538 285 YAYEVDGLGN 294 (434)
T ss_pred EEEEecCCCc
Confidence 9999999886
No 29
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]
Probab=94.86 E-value=0.46 Score=55.34 Aligned_cols=183 Identities=15% Similarity=0.199 Sum_probs=98.6
Q ss_pred ccCCCccccccccCCCcc------eehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhh
Q 007986 365 VTDGSCMIDRRMGIHGHP------LEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKIN 438 (582)
Q Consensus 365 v~Dg~~WmD~r~gr~G~p------VEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~ 438 (582)
..+-+.|||- +||.-+| |+--+.-+-|=|++.++++.+|.. ..+.+.++.. .+.++.+.+.-|.++.+.+
T Consensus 580 p~~L~SGlDD-yPRAs~Ps~~ElhvDl~~W~~lasrsl~~iae~lg~~-~~E~~~a~~e--~~~~e~L~~~HW~ee~~~y 655 (849)
T KOG2161|consen 580 PHCLSSGLDD-YPRASHPSVLELHVDLRCWVGLASRSLNRIAEFLGET-EAEYATAITE--LECKENLVQNHWSEEDQAY 655 (849)
T ss_pred cccccccccc-cccccCchHHHHhhhhHHHHHHHHHHHHHHHHHhcch-hhhhhhhhhH--HHHHHHHHHhccChhhCee
Confidence 3445678885 8888776 555677777889999999988862 2333332222 2357778888998776542
Q ss_pred hhhhcccccccccc-ccccCCCCCCccccccccccCCCceeecccCCCccccc-cc-ccc--chhhhhcCC--CCHHHHH
Q 007986 439 EIYRYKTEEYSTDA-TNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFR-FF-TLG--NLWSIVSSL--GTPKQNE 511 (582)
Q Consensus 439 ~iyr~~te~y~~~a-~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R-~~-alG--NlLAI~~gL--l~~eqa~ 511 (582)
.+ ++... --.-++.|.++-. ...+... .+...|+. + ++ .+| +++-+...| ++.++-.
T Consensus 656 ---~D----~g~h~~dv~~~~~p~~g~~--~r~~~r~----v~~~~p~~---e~v~~h~GYvSl~P~mlrLlp~~S~rL~ 719 (849)
T KOG2161|consen 656 ---CD----FGNHTEDVSITPEPSIGKQ--FRGLVRR----VDWFVPNL---ELVDRHIGYVSLFPFMLRLLPATSPRLT 719 (849)
T ss_pred ---ee----ccCChhhccccccCCcccc--hhhhhee----ccccCCcc---eeeecccceeehhhhHHhhcCCCchHHH
Confidence 21 11100 0011223322100 0000000 00000111 0 11 222 111122222 5778889
Q ss_pred HHHHHHHhhhhhhccCCCceecCCCCCCCCceeee-CCCCCCCCCCCccCCCCccchHHHHHHHH
Q 007986 512 SILNLIEAKWDDLVGHMPLKICYPALESEDWRIIT-GSDPKNTPWSYHNGGSWPTLLWQVSSDIV 575 (582)
Q Consensus 512 ~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~-~gd~~nrp~SYHNGgvWPwLLg~y~~A~l 575 (582)
+++++|... .+|.+|||||+|+- .++-|..+- +.|+ +|-.|.||==+.-.-..|.-
T Consensus 720 ~~Ldli~D~-~~lwSpYGlrSLS~--~s~yym~~Nte~d~-----pYWRGpIW~N~NYLiLsaL~ 776 (849)
T KOG2161|consen 720 KLLDLISDE-NELWSPYGLRSLSR--SSPYYMKRNTEHDP-----PYWRGPIWMNVNYLILSALR 776 (849)
T ss_pred HHHHHhcCc-ccccCcchhhhhhh--cCCccccccCCCCC-----cccccceeeehHHHHHHHHH
Confidence 999999875 69999999999995 566554332 2222 79999999544444344433
No 30
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=87.10 E-value=0.69 Score=53.84 Aligned_cols=97 Identities=18% Similarity=0.157 Sum_probs=64.2
Q ss_pred HHHhCChhHHhh--hhHHHHHHHHHHHhhcCCCCCCCceeccCCCcccccccc---CCCcceehhHHHHHHHHHHHHHHH
Q 007986 327 GKITGDYALQER--VDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMG---IHGHPLEIQALFYTALRCSREMLT 401 (582)
Q Consensus 327 ~k~TGD~~fl~~--p~vq~~L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~g---r~G~pVEIQALwYnALr~aaeLa~ 401 (582)
+..|||+.|++. |.+..+|+. +.+...|.- .|.-++| +.|-.+. ..|---+--+||-.||+.|.+||.
T Consensus 570 ~~~tgd~~flk~~wpsv~~ime~----l~~fDKD~D-GmIEN~G--fpDQTYD~W~~tGvSAYCGgLWlAALqa~~amA~ 642 (879)
T KOG2119|consen 570 YVATGDEKFLKAVWPSVYAIMEY----LEQFDKDND-GMIENEG--FPDQTYDAWSMTGVSAYCGGLWLAALQAASAMAR 642 (879)
T ss_pred eEEeccHHHHHHHHHHHHHHHHH----HHhhcccCC-cccccCC--CCCccccceEEecchhhhhHHHHHHHHHHHHHHH
Confidence 456899999988 777776644 332222222 1222222 1122111 346566778999999999999999
Q ss_pred hcCCCCchHHHHHHHHHHHHHHHHHHHhhhcc
Q 007986 402 VSDGSGSNNLVRAINNRLSALSFHIREYYWVD 433 (582)
Q Consensus 402 ~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld 433 (582)
+.|+ .+........++.-+..+.+..|..
T Consensus 643 ~~g~---~~~~~~f~~klekak~~ye~kLWNG 671 (879)
T KOG2119|consen 643 QIGD---PNTQDYFNNKLEKAKDVYEKKLWNG 671 (879)
T ss_pred HhCC---hhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9987 5666667777777788889999974
No 31
>PF03632 Glyco_hydro_65m: Glycosyl hydrolase family 65 central catalytic domain; InterPro: IPR005195 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The family of glycosyl hydrolases (GH65 from CAZY) which contains this domain includes vacuolar acid trehalase and maltose phosphorylase. Maltose phosphorylase (MP) is a dimeric enzyme that catalyzes the conversion of maltose and inorganic phosphate into beta-D-glucose-1-phosphate and glucose. The central domain is the catalytic domain, which binds a phosphate ion that is proximal the the highly conserved Glu. The arrangement of the phosphate and the glutamate is thought to cause nucelophilic attack on the anomeric carbon atom []. The catalytic domain also forms the majority of the dimerisation interface.; GO: 0003824 catalytic activity, 0005975 carbohydrate metabolic process; PDB: 1H54_A.
Probab=83.09 E-value=6 Score=43.17 Aligned_cols=86 Identities=12% Similarity=-0.067 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHhCChhHHhh---hhHHHHHHHHHHHhhcCC-CCCCCceeccCCCccccccccCCCcceehhHHHHH
Q 007986 316 GLWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLADG-FDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYT 391 (582)
Q Consensus 316 tLWfIIaL~~Y~k~TGD~~fl~~---p~vq~~L~~IL~~~l~~g-fd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYn 391 (582)
+.-...++++|+..|||.+|+++ |-+.++-+.-.+....+. .+.+...-|.++.-+- ..---....|+..=.
T Consensus 107 ~adIa~a~~~Y~~~TgD~~~l~~~g~eil~etArfw~sr~~~~~~~g~y~i~~V~GPDEY~----~~V~NnayTN~ma~~ 182 (370)
T PF03632_consen 107 NADIAYAIWQYYQATGDEEFLREYGAEILFETARFWASRVEYNEDTGRYEIRNVTGPDEYH----ENVDNNAYTNAMAKW 182 (370)
T ss_dssp HHHHHHHHHHHHHHH---TTTTTHHHHHHHHHHHHHHHH-EEETTTTEEE--SB--SSTTS-----SBS--HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCcHHHHHccCHHHHHHHHHHHHHheEEcCCCCeEEecccCchhccc----CCCCCcHHHHHHHHH
Confidence 44567899999999999999987 222221121112111110 0112111111110110 011145799999999
Q ss_pred HHHHHHHHHHhcCC
Q 007986 392 ALRCSREMLTVSDG 405 (582)
Q Consensus 392 ALr~aaeLa~~~g~ 405 (582)
.|+.+.++++.++.
T Consensus 183 ~L~~A~~~~~~~~~ 196 (370)
T PF03632_consen 183 NLRLAAEAAERLGE 196 (370)
T ss_dssp HHHHHHHHHTTS-H
T ss_pred HHHHHHHHHHHCch
Confidence 99999999998864
No 32
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=37.58 E-value=2.6e+02 Score=32.90 Aligned_cols=125 Identities=15% Similarity=0.075 Sum_probs=68.3
Q ss_pred cchHHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcC---ChHHHHHHHHHHHhhhh
Q 007986 187 EETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKG---EGEIVRNFLLHTLQLQS 263 (582)
Q Consensus 187 ~~~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G---~pEiar~~L~~la~lQs 263 (582)
.++++++++++.|++.++.- ..| ..... .=.++| |+..+..+++..| +...++..+..|...|-
T Consensus 284 ~~~~~~~~~l~~l~~~~~~~---~~g-~~~~~-------~~s~vW--DTa~ai~AL~~ag~~~~~p~l~kA~~~L~~~Qi 350 (635)
T TIGR01507 284 QHDAFIKLGWEGIDLYGVEL---DDS-WMFQA-------CVSPVW--DTALAVLALREAGLPADHDALVKAGEWLLDKQI 350 (635)
T ss_pred CCCHHHHHHHHHHHHheEec---CCc-eEecC-------CCCcHH--HHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhcc
Confidence 56789999999998876642 223 21110 012444 8888888876555 34456667777776554
Q ss_pred hhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccC----ccCCCCcHHHHHHHHHHHHHHhCChhHHhhh
Q 007986 264 WEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIG----RVAPVDSGLWWIILLRAYGKITGDYALQERV 339 (582)
Q Consensus 264 ~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~----~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p 339 (582)
... +.++ +.. .| ..-|--++. +|-.+|-|..-+.||..- .+.+.. ..+.
T Consensus 351 ~~~--~~w~-----~~~----~~-------------~~~GGW~f~~~~~~~pd~ddTa~~L~AL~~~--~~~~~~-~~~~ 403 (635)
T TIGR01507 351 TVP--GDWA-----VKR----PN-------------LEPGGWAFQFDNVYYPDVDDTAVVVWALNGL--RLPDER-RRRD 403 (635)
T ss_pred cCC--CCcc-----ccC----CC-------------CCCCccCCCCCCCCCCCchhHHHHHHHHHHc--CCCccc-cchH
Confidence 322 1111 110 00 111222222 367899999999998764 122221 1123
Q ss_pred hHHHHHHHHHHH
Q 007986 340 DVQTGIKLIMNL 351 (582)
Q Consensus 340 ~vq~~L~~IL~~ 351 (582)
.++++++|++..
T Consensus 404 ~i~ra~~wLl~~ 415 (635)
T TIGR01507 404 AMTKAFRWIAGM 415 (635)
T ss_pred HHHHHHHHHHHh
Confidence 577777776654
No 33
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=36.42 E-value=2.4e+02 Score=29.77 Aligned_cols=98 Identities=10% Similarity=-0.029 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhhcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHH
Q 007986 316 GLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRC 395 (582)
Q Consensus 316 tLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~ 395 (582)
.-=.|.++..+++.+||.++++. ..++++.+.+.+....+..+--.+-++|. ....++-++.||+.-.||..
T Consensus 55 ~ar~i~~~a~a~~~~~~~~~l~~--A~~~~~fl~~~~~d~~~Gg~~~~~~~~g~------~~~~~~~l~~~a~~l~ala~ 126 (384)
T cd00249 55 QARQVYCFAVAYLLGWRPEWLEA--AEHGLEYLDRHGRDPDHGGWYFALDQDGR------PVDATKDLYSHAFALLAAAQ 126 (384)
T ss_pred ecHHHHHHHHHHHhcCChhHHHH--HHHHHHHHHHhCcCCCCCCEEEEEcCCCC------CcccccchHHHHHHHHHHHH
Confidence 33468889999999999888765 67777776665542211111100001221 11223458888887777665
Q ss_pred HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhh
Q 007986 396 SREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYW 431 (582)
Q Consensus 396 aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FW 431 (582)
+. +..++ .+.. ..+..+-+.+.++||
T Consensus 127 ~~---~at~d---~~~l----~~A~~~~~~l~~~~~ 152 (384)
T cd00249 127 AA---KVGGD---PEAR----ALAEETIDLLERRFW 152 (384)
T ss_pred HH---HhcCC---HHHH----HHHHHHHHHHHHHhc
Confidence 54 44444 3333 334445556677787
No 34
>cd02892 SQCY_1 Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization cascade converting linear triterpenes to fused ring compounds. This group contains bacterial SQCY which catalyzes the convertion of squalene to hopene or diplopterol and eukaryotic OSQCY which transforms the 2,3-epoxide of squalene to compounds such as, lanosterol in mammals and fungi or, cycloartenol in plants. Deletion of a single glycine residue of Alicyclobacillus acidocaldarius SQCY alters its substrate specificity into that of eukaryotic OSQCY. Both enzymes have a second minor domain, which forms an alpha-alpha barrel that is inserted into the major domain.
Probab=36.40 E-value=3.3e+02 Score=31.78 Aligned_cols=133 Identities=14% Similarity=0.113 Sum_probs=72.0
Q ss_pred cchHHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcCCh----HHHHHHHHHHHhhh
Q 007986 187 EETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEG----EIVRNFLLHTLQLQ 262 (582)
Q Consensus 187 ~~~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~p----Eiar~~L~~la~lQ 262 (582)
.+++.++++++.+++.+.. .+.|.+.... +-.++| |+.+++.++...|.. +.++..+..|+..|
T Consensus 275 ~~~~~~~~~l~~l~~~~~~---~~~g~~~~~~-------~~s~~w--DTala~~AL~~ag~~~~~~~~l~ka~~wL~~~Q 342 (634)
T cd02892 275 PDSPAFKRHLERIDDFLWL---GPEGMKMCQT-------NGSQVW--DTALAVQALLEAGLAPEFDPALKKALDWLLESQ 342 (634)
T ss_pred CCCHHHHHHHHHHHhcEEE---ecCCcEEEcC-------CCCchH--HHHHHHHHHHHcCCCccchHHHHHHHHHHHHHH
Confidence 5789999999999997653 3566664431 233566 899999998655532 35666777787776
Q ss_pred hhhhhcccCCCC-CCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhH
Q 007986 263 SWEKTVDCYSPG-QGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDV 341 (582)
Q Consensus 263 s~~~tld~~~~~-~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~v 341 (582)
-.... ..|+.. ...-|+.. .|..... .+..+|.|---+.++....+..+...-.....+
T Consensus 343 ~~~~~-gdw~~~~~~~~~GGW------------------~fs~~~~-~~pd~d~Ta~~l~AL~~~~~~~~~~~~~~~~~i 402 (634)
T cd02892 343 ILDNP-GDWKVKYRHLRKGGW------------------AFSTANQ-GYPDSDDTAEALKALLRLQELPPFGEKVSRERL 402 (634)
T ss_pred cCCCC-CchhhhCCCCCCCCC------------------CCCCCCC-CCCCcCchHHHHHHHHHhhccCCcchhhHHHHH
Confidence 51110 111100 00112211 0111111 245678887788888776544321011122447
Q ss_pred HHHHHHHHHH
Q 007986 342 QTGIKLIMNL 351 (582)
Q Consensus 342 q~~L~~IL~~ 351 (582)
+++++++++.
T Consensus 403 ~~Av~wLl~~ 412 (634)
T cd02892 403 YDAVDWLLGM 412 (634)
T ss_pred HHHHHHHHhc
Confidence 7777776644
No 35
>PF06051 DUF928: Domain of Unknown Function (DUF928); InterPro: IPR010328 This is a family of uncharacterised bacterial proteins.
Probab=24.88 E-value=78 Score=31.41 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=21.5
Q ss_pred hhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 007986 385 IQALFYTALRCSREMLTVSDGSGSNNLVRAINN 417 (582)
Q Consensus 385 IQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ 417 (582)
-|+|||.||...+++.+..-. ...+...|..
T Consensus 143 e~GiWyDaL~~La~lr~~~p~--d~~l~~~W~~ 173 (189)
T PF06051_consen 143 ENGIWYDALATLAELRRSQPN--DPQLAQDWQE 173 (189)
T ss_pred HhCchHHHHHHHHHHHHcCCC--ChHHHHHHHH
Confidence 378999999999999776432 3455544444
No 36
>TIGR01507 hopene_cyclase squalene-hopene cyclase. SHC is an essential prokaryotic gene in hopanoid (triterpenoid) biosynthesis. Squalene hopene cyclase, an integral membrane protein, directly cyclizes squalene into hopanoid products.
Probab=22.30 E-value=9.4e+02 Score=28.38 Aligned_cols=72 Identities=17% Similarity=0.100 Sum_probs=42.2
Q ss_pred cchHHHHHHHHHHHHHhhhcccccCeeEe--ccCCCCC------CCCCCCCcccchhHHHHHHHHhcC--C----hHHHH
Q 007986 187 EETEIEKEAWRLLQEAVVTYCESPIGTVA--ANDPGDK------QPLNYDQVFIRDFVPSALAFLLKG--E----GEIVR 252 (582)
Q Consensus 187 ~~~~~~~~A~~~Lr~~~v~~~~~p~GtlA--A~~~~~~------~a~nY~~vfGRD~~IS~lglL~~G--~----pEiar 252 (582)
++++.+++|.+-|++..+.- | |... ..+.... ...+|..++ ||..++.+++..+ + .+.++
T Consensus 333 ~~~p~l~kA~~~L~~~Qi~~---~-~~w~~~~~~~~~GGW~f~~~~~~~pd~d--dTa~~L~AL~~~~~~~~~~~~~~i~ 406 (635)
T TIGR01507 333 ADHDALVKAGEWLLDKQITV---P-GDWAVKRPNLEPGGWAFQFDNVYYPDVD--DTAVVVWALNGLRLPDERRRRDAMT 406 (635)
T ss_pred CCCHHHHHHHHHHHhhcccC---C-CCccccCCCCCCCccCCCCCCCCCCCch--hHHHHHHHHHHcCCCccccchHHHH
Confidence 35789999999898886642 2 2211 0000000 012354554 8888888775433 1 25778
Q ss_pred HHHHHHHhhhhh
Q 007986 253 NFLLHTLQLQSW 264 (582)
Q Consensus 253 ~~L~~la~lQs~ 264 (582)
..++.|+.+|..
T Consensus 407 ra~~wLl~~Qn~ 418 (635)
T TIGR01507 407 KAFRWIAGMQSS 418 (635)
T ss_pred HHHHHHHHhcCC
Confidence 888888877764
Done!