Query 007986
Match_columns 582
No_of_seqs 200 out of 448
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 15:21:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007986.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007986hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v7w_A Chitobiose phosphorylas 99.9 1.8E-27 6E-32 269.6 16.4 288 229-577 344-656 (807)
2 3qde_A Cellobiose phosphorylas 99.9 3E-26 1E-30 261.8 21.9 276 230-577 356-665 (811)
3 3rrs_A Cellobiose phosphorylas 99.9 9.1E-26 3.1E-30 258.2 22.7 272 230-577 363-678 (822)
4 3c68_A Uncharacterized protein 99.9 2.5E-24 8.5E-29 244.6 25.1 324 187-577 279-700 (761)
5 2z07_A Putative uncharacterize 99.9 1E-23 3.4E-28 221.8 23.1 293 190-577 3-369 (420)
6 2jg0_A Periplasmic trehalase; 99.9 2.6E-23 8.9E-28 227.9 20.7 254 225-577 121-437 (535)
7 2okx_A Rhamnosidase B; alpha b 99.8 9.3E-18 3.2E-22 194.5 23.5 262 188-576 546-813 (956)
8 3cih_A Putative alpha-rhamnosi 99.8 3.3E-17 1.1E-21 185.1 22.1 203 227-519 337-547 (739)
9 1ulv_A Glucodextranase; GH fam 99.4 2.7E-12 9.3E-17 150.2 22.0 196 189-434 283-485 (1020)
10 1lf6_A Glucoamylase; (alpha/al 99.3 2.8E-11 9.7E-16 136.0 20.8 193 187-434 293-493 (684)
11 2p0v_A Hypothetical protein BT 98.6 1.1E-06 3.6E-11 95.6 18.5 222 203-448 87-338 (489)
12 3qry_B Putative uncharacterize 98.5 4.2E-06 1.4E-10 89.6 19.8 239 188-449 25-293 (426)
13 3qt9_A Putative uncharacterize 98.4 1.2E-05 4.1E-10 86.2 20.2 238 188-449 28-293 (427)
14 2fba_A Glucoamylase Glu1; (alp 98.4 1.4E-05 4.9E-10 87.1 19.7 195 208-433 46-267 (492)
15 3p2c_A Putative glycosyl hydro 98.3 1.8E-05 6.2E-10 85.5 18.3 217 209-449 75-321 (463)
16 2vn4_A Glucoamylase; hydrolase 98.2 6.6E-05 2.3E-09 83.7 21.7 187 208-434 30-231 (599)
17 1gai_A Glucoamylase-471; hydro 98.2 0.00011 3.7E-09 79.9 20.9 181 208-432 31-228 (472)
18 1h54_A Maltose phosphorylase; 93.7 0.35 1.2E-05 55.2 12.0 81 316-400 429-513 (754)
19 2rdy_A BH0842 protein; PSI-II, 90.8 0.71 2.4E-05 53.0 9.8 175 229-418 363-556 (803)
20 2eab_A Alpha-fucosidase; glyco 63.9 9.5 0.00032 44.6 6.8 84 315-405 507-599 (899)
21 3k7x_A LIN0763 protein; Q92DQ0 39.9 2E+02 0.007 29.3 11.5 98 310-431 147-250 (349)
22 1w6k_A Lanosterol synthase; cy 38.9 2.9E+02 0.0099 31.3 13.5 131 187-351 353-493 (732)
23 2zzr_A Unsaturated glucuronyl 36.9 3.9E+02 0.013 28.0 14.6 40 311-353 171-210 (397)
24 2zzr_A Unsaturated glucuronyl 31.9 4.7E+02 0.016 27.4 16.3 136 190-351 134-281 (397)
25 2gz6_A N-acetyl-D-glucosamine 24.4 1.5E+02 0.0052 29.7 7.4 95 318-436 119-214 (388)
26 1dl2_A Class I alpha-1,2-manno 23.5 2.8E+02 0.0095 30.3 9.5 143 187-354 122-277 (511)
27 2sqc_A Squalene-hopene cyclase 21.2 1.3E+02 0.0046 33.1 6.6 126 188-350 279-409 (631)
28 2ooa_A E3 ubiquitin-protein li 20.6 92 0.0032 24.2 3.6 27 231-258 23-49 (52)
No 1
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.95 E-value=1.8e-27 Score=269.55 Aligned_cols=288 Identities=14% Similarity=0.095 Sum_probs=196.9
Q ss_pred Cccc-chhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCC-CCCCceeeccccCCCccccc------cccC
Q 007986 229 QVFI-RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQG-LMPASFKVRNVPLESNKFEE------VLDP 300 (582)
Q Consensus 229 ~vfG-RD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~G-liP~sfKI~h~~~r~~~ge~------~l~p 300 (582)
..|| ||+++++++++ .++|+++|++|+.++..|.. +| .+|.-+.-.+++ +.|+. .+.+
T Consensus 344 ~~~G~RD~~~~~~~l~-~~~p~~ar~~l~~~~~~Q~~----------~G~~~p~~~p~~~~~---~~g~~~~~~~~~~~g 409 (807)
T 1v7w_A 344 TGLGYRDTAQDAISVP-HANPEMTRKRIVDLLRGQVK----------AGYGLHLFDPDWFDP---EKEDVAPSKSPTVVP 409 (807)
T ss_dssp CSEEHHHHHHHTTSCT-TTCHHHHHHHHHHHHHTBCT----------TSCBCSEECGGGGCC------------------
T ss_pred CccCchHHhHHHHHHh-hcCHHHHHHHHHHHHhcccc----------CCCcceeeeeccccc---cccccCCcccccccc
Confidence 5799 99999999976 88999999999999876643 34 344422101110 00110 0001
Q ss_pred CCCCCc--cC-ccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hh-----------HHHHHHHHHHHhhcCCCCCCCcee
Q 007986 301 DFGESA--IG-RVAPVDSGLWWIILLRAYGKITGDYALQER--VD-----------VQTGIKLIMNLCLADGFDMFPSLL 364 (582)
Q Consensus 301 d~Ge~~--i~-~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~-----------vq~~L~~IL~~~l~~gfd~~p~Ll 364 (582)
+.|+.. ++ .....|++|||++++++|+++|||.+|+++ |. +++++++++..+..+ ..+
T Consensus 410 ~~~~~~~~~g~~~~~~D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~~~~---GL~--- 483 (807)
T 1v7w_A 410 TPSDEDKIHGIKDTCSDDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVGQT---GIC--- 483 (807)
T ss_dssp -------CCCGGGCBSSGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBCTT---SCB---
T ss_pred CCCcchhhcCCCCCccchhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcCCCC---CCc---
Confidence 111111 11 123349999999999999999999999998 64 777777766543222 111
Q ss_pred ccCCCcccccccc-CCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhc
Q 007986 365 VTDGSCMIDRRMG-IHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRY 443 (582)
Q Consensus 365 v~Dg~~WmD~r~g-r~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~ 443 (582)
.....+|.|. +. ..|+++|+|||||.||+.+++|++.+|+ .+.+++++++++.|++.|+++||.++.+.+ .
T Consensus 484 ~~~~~DW~D~-~~~~~g~~v~~~a~~y~al~~~a~la~~lG~---~~~a~~~~~~A~~lk~~~~~~~w~~~~~~f---~- 555 (807)
T 1v7w_A 484 KGLRADWNDC-LNLGGGESSMVSFLHFWALQEFIDLAKFLGK---DQDVNTYTEMAANVREACETHLWDDEGGWY---I- 555 (807)
T ss_dssp EEETCSSSTT-CCCEEEEEHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHSEETTTTEE---C-
T ss_pred ccCCCCCCCc-CCCCCCeehhHHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHhccCCCCCee---e-
Confidence 2233578664 32 2789999999999999999999999987 677889999999999999999998643211 0
Q ss_pred cccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhh
Q 007986 444 KTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDD 523 (582)
Q Consensus 444 ~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~e 523 (582)
..+..++-.+ +.. ...+.++++.+|.+|+++++++++|++++++.|.+ .
T Consensus 556 -------------------------~~~~~d~~~~-g~~--~~~~~~~~~~~~~~al~~g~~~~e~a~~~l~~v~~---~ 604 (807)
T 1v7w_A 556 -------------------------RGLTKNGDKI-GTA--QQQEGRVHLESNTLAVLSGLASQERGEQAMDAVDE---H 604 (807)
T ss_dssp -------------------------CEECTTSCEE-SCT--TCSSCCEEHHHHHHHHHTTCSCHHHHHHHHHHHHH---H
T ss_pred -------------------------eeeccCCCCc-CCc--cCCCCcCcccchHHHHhhCCCCHHHHHHHHHHHHH---h
Confidence 0000011000 110 11234577888999999999999999999999998 8
Q ss_pred hccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHH
Q 007986 524 LVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTY 577 (582)
Q Consensus 524 Lltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~ 577 (582)
|.+++|+|+++|+... +....++-..+.|..||||++||+....++.|+.|+
T Consensus 605 L~~~~G~~~~~p~~~~--~~~~~g~~~~y~~~~~enG~~~~~~~~w~~~al~~~ 656 (807)
T 1v7w_A 605 LFSPYGLHLNAPSFST--PNDDIGFVTRVYQGVKENGAIFSHPNPWAWVAETKL 656 (807)
T ss_dssp HEETTEECSEESCCCS--CCTTTCGGGGSCTTBTTBTSEESTTHHHHHHHHHHT
T ss_pred cCCCCceeecCCcccc--cCcCCceeeccCCccccccccccchHHHHHHHHHHc
Confidence 9999999999996531 111112224567788999999999988888888775
No 2
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=99.94 E-value=3e-26 Score=261.83 Aligned_cols=276 Identities=16% Similarity=0.136 Sum_probs=195.1
Q ss_pred ccc-chhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCC--Cc
Q 007986 230 VFI-RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGE--SA 306 (582)
Q Consensus 230 vfG-RD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge--~~ 306 (582)
-|| ||.+.-+++++.. +||++|..|+.++.. |-.+|.+|..+ . |..|+ ..
T Consensus 356 ~~G~RD~~qd~~~~~~~-~p~~~r~~il~~~~~----------Q~~dG~~~h~~--~--------------p~~~~g~~~ 408 (811)
T 3qde_A 356 GMGFRDSNQDLLGFVHQ-IPERARERLLDLAAT----------QLEDGSAYHQY--Q--------------PLTKKGNNE 408 (811)
T ss_dssp CEEHHHHHHHHHTTTTT-CHHHHHHHHHHHHTT----------BCTTSCBCSEE--C--------------TTTCCEECT
T ss_pred CCccHHHHHHHHHHHhc-CHHHHHHHHHHHHhh----------cccCCCcccee--c--------------CCCCCCCCC
Confidence 577 9999999998755 799999999977743 23589999855 1 11111 11
Q ss_pred cCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--h---------hHHHHHHHHHHHhhcCCCCCCCceeccCCCcccccc
Q 007986 307 IGRVAPVDSGLWWIILLRAYGKITGDYALQER--V---------DVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRR 375 (582)
Q Consensus 307 i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p---------~vq~~L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r 375 (582)
++ ...+|.+||+|+++++|++.|||.+|+++ | .+-+.++..+++++.. ++.+. |......+|+|.-
T Consensus 409 ~~-~~~~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~-~g~~G-L~~~g~~DWnD~l 485 (811)
T 3qde_A 409 IG-SNFNDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNN-LGPHG-LPLIGRADWNDCL 485 (811)
T ss_dssp TC-CCBTTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTC-BCTTS-SBBCBTCSSSTTC
T ss_pred CC-CCcccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhc-CCCCC-CcccccCCchhhc
Confidence 11 35799999999999999999999999986 3 1222333333443311 12222 2223345777742
Q ss_pred --------c-----------cCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhh
Q 007986 376 --------M-----------GIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKK 436 (582)
Q Consensus 376 --------~-----------gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~ 436 (582)
+ ++.|..||+++|||+||+.+++|++.+|+ .+.+++++++++.|+++|+++||.. +.
T Consensus 486 n~~~~~~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~lGd---~~~A~~~~~~A~~lk~a~~~~~Wdg-~~ 561 (811)
T 3qde_A 486 NLNCFSTVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEYMGL---EEEARKAQQHIDAMKEAILKYGYDG-EW 561 (811)
T ss_dssp CSSCCCCCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHHHSBCS-SS
T ss_pred cccccccccCccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHHHHHHHhccCc-Ce
Confidence 1 25799999999999999999999999987 7888999999999999999999953 11
Q ss_pred hhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHH-HHHHHHH
Q 007986 437 INEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPK-QNESILN 515 (582)
Q Consensus 437 l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~e-qa~~Ild 515 (582)
|+ ..+..+| -.++.. .....|+++.++.+|+++++++++ |++++|+
T Consensus 562 ----y~--------------------------ra~~~dg-~~~gs~--~~~~~qi~~~~q~~avlsGia~~e~ra~~~m~ 608 (811)
T 3qde_A 562 ----FL--------------------------RAYDDFG-RKVGSK--ENEEGKIFIESQGFCVMAEIGLEDGKALKALD 608 (811)
T ss_dssp ----BC--------------------------CEECTTS-CEESST--TSSSCCEESHHHHHHHHTTCSSSSSHHHHHHH
T ss_pred ----EE--------------------------EEEcCCC-CCCCcc--CCCCceEEecchhHHHHhCCCCchHHHHHHHH
Confidence 11 1111111 111111 112345788888899999999999 9999999
Q ss_pred HHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHH
Q 007986 516 LIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTY 577 (582)
Q Consensus 516 ~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~ 577 (582)
.|.+ +|++|+|||+++|+.....+. -+.-..+.|.+||||++||+-..-.+.|..|+
T Consensus 609 ~v~~---~L~t~~Glrll~p~f~~~~~d--~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~ 665 (811)
T 3qde_A 609 SVKK---YLDTPYGLVLQNPAFTRYYIE--YGEISTYPPGYKENAGIFCHNNAWIICAETVV 665 (811)
T ss_dssp HHHH---HHCCTTCCCSEESCCCSCCTT--TGGGGTSCTTSTTTTCEEHHHHHHHHHHHHHT
T ss_pred HHHH---HhCCCcceEeecCCccccCCC--CCceeccCCCccccccccchHHHHHHHHHHHc
Confidence 9998 999999999999975422211 11223468899999999999877777776664
No 3
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=99.94 E-value=9.1e-26 Score=258.23 Aligned_cols=272 Identities=17% Similarity=0.149 Sum_probs=196.2
Q ss_pred ccc-chhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCC--CCCc
Q 007986 230 VFI-RDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDF--GESA 306 (582)
Q Consensus 230 vfG-RD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~--Ge~~ 306 (582)
-|| ||.+.-+++++.. +||++|..|+.++.. |-.+|.+|..+ . |.. |...
T Consensus 363 ~~G~RD~~qd~~~~~~~-~pe~ar~~il~~~~~----------Q~~dG~v~h~~--~--------------p~~~~g~~~ 415 (822)
T 3rrs_A 363 GMGFRDSNQDLLGFVHL-IPERARERIIDIAST----------QFADGSAYHQY--Q--------------PLTKRGNND 415 (822)
T ss_dssp CEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHTT----------CCTTSCCCSEE--E--------------TTTTEECTT
T ss_pred CCchHHHHHHHHHHHhc-CHHHHHHHHHHHHHh----------hcccCccccee--c--------------CcCCCCccC
Confidence 577 9999999998755 799999999977743 23589999855 2 111 2111
Q ss_pred cCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--h-------------hHHHHHHHHHHHhhcCCCCCCCceeccCCCcc
Q 007986 307 IGRVAPVDSGLWWIILLRAYGKITGDYALQER--V-------------DVQTGIKLIMNLCLADGFDMFPSLLVTDGSCM 371 (582)
Q Consensus 307 i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p-------------~vq~~L~~IL~~~l~~gfd~~p~Llv~Dg~~W 371 (582)
++ ...+|.+||+++++++|++.|||.+|+++ | ++.++++++++.. +.+. |......+|
T Consensus 416 ~~-~~~~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~-----g~~G-Lp~~g~gDW 488 (822)
T 3rrs_A 416 IG-SGFNDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHR-----GPHG-LPLIGRADW 488 (822)
T ss_dssp TC-SCBTTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSB-----CTTS-SBBCBTCSS
T ss_pred CC-CcccchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcC-----CCCC-CcccCCCcc
Confidence 11 35699999999999999999999999986 4 3444444444322 1222 222224467
Q ss_pred cccc--------c-----------cCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhc
Q 007986 372 IDRR--------M-----------GIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWV 432 (582)
Q Consensus 372 mD~r--------~-----------gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWl 432 (582)
+|.- + ++.|..||+++|||+||+.+++|++.+|+ .+.+++++++++.|+++|+++||.
T Consensus 489 nD~ln~~~~~~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~G~---~~~A~~~~~~A~~lk~a~~~~~Wd 565 (822)
T 3rrs_A 489 NDCLNLNCFSTTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAARRGL---ADVADRARGHVAEMRDALLTDGWD 565 (822)
T ss_dssp STTCCTTCCCCSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHTTTBC
T ss_pred hhhcccccccccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHHHHHHHhccC
Confidence 7742 1 26799999999999999999999999987 678899999999999999999994
Q ss_pred chhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHH----
Q 007986 433 DMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPK---- 508 (582)
Q Consensus 433 d~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~e---- 508 (582)
. + .|+.. +..+| -.++.. .....|+++.++.+++++++++++
T Consensus 566 g-~----~y~ra--------------------------~d~dg-~~~gs~--~~~~~~i~~~~q~~avlsGia~~e~~~~ 611 (822)
T 3rrs_A 566 G-S----WFLRA--------------------------YDYYG-NPIGTD--AHDEGKIWIEPQGFAVMAGVGVGEGPQD 611 (822)
T ss_dssp S-S----SBCCE--------------------------ECTTS-CEESCT--TSSSCCEEHHHHHHHHHTTTTCCSSTTC
T ss_pred c-c----eeEEE--------------------------EcCCC-CCcccc--CCCCceEEeccchhHhhcCCCCcccccc
Confidence 2 1 12111 11111 111111 112345778888889999999999
Q ss_pred ---HHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHH
Q 007986 509 ---QNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTY 577 (582)
Q Consensus 509 ---qa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~ 577 (582)
|++++|+.|.+ +|++|+|||+++|+.. .+..-.+.-..+.|.+||||++||+-..-.+.|..|+
T Consensus 612 ~~~~a~~al~~v~~---~L~t~~Girll~p~f~--~~~~~~g~~~~Y~pg~~enG~iy~H~~~w~~~a~a~~ 678 (822)
T 3rrs_A 612 TDAPAIKALDSVNE---MLATDHGMVLQYPAYT--TYQVHMGEVSTYPPGYKENGGIFCHNNPWVIIAETVV 678 (822)
T ss_dssp TTSHHHHHHHHHHH---HTEETTEEBSEESCCS--SCCTTSTTGGGSCTTBTTBTCEETTTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH---HcCCCCeEEEcCCCcc--cccCCCCcccccCCCccccccccccHHHHHHHHHHHc
Confidence 99999999998 9999999999999753 1122233445678899999999999887777777665
No 4
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=99.92 E-value=2.5e-24 Score=244.62 Aligned_cols=324 Identities=14% Similarity=0.112 Sum_probs=211.6
Q ss_pred cchHHHHHHHHHHHHHhhhcccccCeeEecc--CCCCCCCCCCCC--cccchhHHHHHHHHhcCChHHHHHHHHHHHhhh
Q 007986 187 EETEIEKEAWRLLQEAVVTYCESPIGTVAAN--DPGDKQPLNYDQ--VFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQ 262 (582)
Q Consensus 187 ~~~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~--~~~~~~a~nY~~--vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQ 262 (582)
+..+|..+|+..|+... ..+.|.+.+. .|. +..+||.. +|+||+.+.++|++.. +++++|+.|+.++.+|
T Consensus 279 ~~~~l~~~a~~tL~~n~----~~~~g~v~~~~v~P~-~g~~wF~~~~~w~wDs~~~a~gL~~~-~~elAr~~L~~l~~~Q 352 (761)
T 3c68_A 279 EQTRVAVKAIETLNGNW----RSPGGAVKFNTVTPS-VTGRWFSGNQTWPWDTWKQAFAMAHF-NPDIAKENIRAVFSWQ 352 (761)
T ss_dssp HHHHHHHHHHHHHHHTE----ECCBTTBCSCEECSC-TTCTTTCTTCBCHHHHHHHHHHHTTT-CHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhc----cCccCcCCCCeEEec-CCCCCCCcCCeeccHHHHHHHHHHHc-CHHHHHHHHHHHHHhh
Confidence 34567778877777752 2344555321 121 34589988 9999999999997644 8999999999999888
Q ss_pred hhhhhcccCCC-CCCCCCCceeeccccCCCccccccccCC-CCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--
Q 007986 263 SWEKTVDCYSP-GQGLMPASFKVRNVPLESNKFEEVLDPD-FGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER-- 338 (582)
Q Consensus 263 s~~~tld~~~~-~~GliP~sfKI~h~~~r~~~ge~~l~pd-~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~-- 338 (582)
.+.. |++++ ..|.||+.+ .+.+ .|+ .|+.+. ++....-.+||++++++|+++|||.+|+++
T Consensus 353 ~~~~--d~~r~~~~G~IP~~~--~~~~----------~p~r~g~~~~-~~~~~sqPPl~~~av~~yy~~tgD~~fL~e~~ 417 (761)
T 3c68_A 353 IQPG--DSVRPQDVGFVPDLI--AWNL----------SPERGGDGGN-WNERNTKPSLAAWSVMEVYNVTQDKTWVAEMY 417 (761)
T ss_dssp CCTT--CSSCGGGTTCCCSBB--CSSC----------CGGGTSCCSS-CBCSCCCCCCHHHHHHHHHHHHCCHHHHHHHH
T ss_pred hhcc--cCCccCCCCEeeeee--ccCC----------cccccCcccc-ccCCCCCcHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 6544 34432 479999844 2210 011 122221 112223347899999999999999999998
Q ss_pred hhHHHHHHHHHHHhh--cCCCCCCCce-----eccCC-------------------------------------------
Q 007986 339 VDVQTGIKLIMNLCL--ADGFDMFPSL-----LVTDG------------------------------------------- 368 (582)
Q Consensus 339 p~vq~~L~~IL~~~l--~~gfd~~p~L-----lv~Dg------------------------------------------- 368 (582)
|.+++.++|..+... .+|+-.+... ..|+|
T Consensus 418 P~L~~~~~w~~~~rd~d~~GL~~y~~~~~~~~~~prge~~~~d~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~a~w 497 (761)
T 3c68_A 418 PKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLFTVKKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASW 497 (761)
T ss_dssp HHHHHHHHHHHHHSCTTCSSCCCCEEECCTTTBCTTSCBEEEEEETTEEEEEECHHHHHHHHHHTCSSEEECHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcCccEEecccccccccCCCcchhccccccccchhcccccccchhccccccccchhhhhhhccc
Confidence 777777777665432 2232221000 00111
Q ss_pred Cccccc--c-----------------------------ccCCCc---------ceehhHHHHHHHHHHHHHHHhcCCCCc
Q 007986 369 SCMIDR--R-----------------------------MGIHGH---------PLEIQALFYTALRCSREMLTVSDGSGS 408 (582)
Q Consensus 369 ~~WmD~--r-----------------------------~gr~G~---------pVEIQALwYnALr~aaeLa~~~g~~~~ 408 (582)
.++||- | .+..|. +|++|||||.|++.+++|++.+|+
T Consensus 498 eSG~D~s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n~~~~G~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~LG~--- 574 (761)
T 3c68_A 498 ESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGK--- 574 (761)
T ss_dssp HHTCTTCGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEEECTTCCEEEEEESEECHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred cCCCCcchhccccccccccccccccccccchhhhhccccccccccccCcccccCHHHHHHHHHHHHHHHHHHHHhCC---
Confidence 122221 0 022243 789999999999999999999987
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCccc
Q 007986 409 NNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMD 488 (582)
Q Consensus 409 ~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D 488 (582)
.+.+++++++++.+++.|+++||.+..+.+.-|. .+. ++++ ....|.. .+
T Consensus 575 ~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~~--~~~-------------~~~~-------~~~~g~~----~s---- 624 (761)
T 3c68_A 575 PEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVR--IED-------------KPLA-------NGCAGKP----IV---- 624 (761)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTEETTTTEECCEE--CCS-------------SCCT-------TSCSSCB----CG----
T ss_pred hHHHHHHHHHHHHHHHHHHHhCcCccCCEEEEEe--cCC-------------Cccc-------cccccce----ee----
Confidence 6778889999999999999999987654321110 000 0000 0000011 01
Q ss_pred cccccccchhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchH
Q 007986 489 FRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLW 568 (582)
Q Consensus 489 ~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg 568 (582)
.+.+...|.+++++++++++|+++|++.|.+. ..|.+++|||+++| .++ .++|.+||||++||.+.|
T Consensus 625 n~~~~~s~~~pL~~Gl~~~e~a~~vl~~L~~~-~~l~t~~Girtls~--~~p----------~y~p~~yw~GpvW~~~~~ 691 (761)
T 3c68_A 625 ERGKGPEGWSPLFNGAATQANADAVVKVMLDP-KEFNTFVPLGTAAL--TNP----------AFGADIYWRGRVWVDQFW 691 (761)
T ss_dssp GGCCCGGGGHHHHTTCSCHHHHHHHHHHHTCT-TTTCCSSCSCSSCT--TCT----------TCCTTCTTTTCEEHHHHH
T ss_pred cchhhHHHHHHHHcCCCCHHHHHHHHHHHhCh-hhhcCCCCccccCC--CCc----------ccCCCccccCCcccchHH
Confidence 12245668889999999999999999999852 15889999999999 444 455789999999996666
Q ss_pred HHHHHHHHH
Q 007986 569 QVSSDIVTY 577 (582)
Q Consensus 569 ~y~~A~lk~ 577 (582)
..+.|+.++
T Consensus 692 lli~aL~~~ 700 (761)
T 3c68_A 692 FGLKGMERY 700 (761)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 667777654
No 5
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=99.92 E-value=1e-23 Score=221.77 Aligned_cols=293 Identities=15% Similarity=0.122 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHh-hhhhhhhc
Q 007986 190 EIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQ-LQSWEKTV 268 (582)
Q Consensus 190 ~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~-lQs~~~tl 268 (582)
+|.++|++.|+.. .++..++++. .+|..+|+||+.+.++|++.. +++.++..|..++. +|
T Consensus 3 ~l~~~a~~~l~~n-----~~~~~~vP~~-------~~f~~~~~wDs~~~~~gl~~~-~~~~a~~~l~~~~~~~q------ 63 (420)
T 2z07_A 3 PLRTKAVEVLQRN-----SRGAFTVPAH-------GLYPYQWLWDSAFIALGWTQV-DWERAWQELLCLFDYGQ------ 63 (420)
T ss_dssp CHHHHHHHHHHHH-----BCSSCBCSST-------TCCSCEEHHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHHHHHHHc-----CCCCCcCCCC-------CCCCCccHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH------
Confidence 4778999999974 3343444442 389999999999999998866 67888877776653 33
Q ss_pred ccCCCCCCCCCCceeeccccCCCccccccc-cCCC-CC-CccC-ccCCCCcHHHHHHHHHHHHHHhCC----hhHHhh--
Q 007986 269 DCYSPGQGLMPASFKVRNVPLESNKFEEVL-DPDF-GE-SAIG-RVAPVDSGLWWIILLRAYGKITGD----YALQER-- 338 (582)
Q Consensus 269 d~~~~~~GliP~sfKI~h~~~r~~~ge~~l-~pd~-Ge-~~i~-~ygsVDAtLWfIIaL~~Y~k~TGD----~~fl~~-- 338 (582)
...|.||. .|.|.+.|. +- .++. |. .+.. ++.+.|.++++++++++|++.||| .+|+++
T Consensus 64 ----~~~G~ip~--~v~~~~~~~-----y~p~~~~w~~~~~~~~~~~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~~~ 132 (420)
T 2z07_A 64 ----GPDGMLPH--IVFHEQSRD-----YFPGPDVWGREARAQPATSGITQPPVVATVVRYLYEKDPDRDRARERARYLF 132 (420)
T ss_dssp ----CTTCCCCS--EEECCSCCC-----CC-----------CCCEECSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred ----hhCCCcce--ecccCCCcc-----cCcchhhhcccccccCCCCCCcCCcHHHHHHHHHHHhCccchhHHHHHHHHH
Confidence 35899998 333322110 00 0010 11 1222 357889999999999999999999 899998
Q ss_pred hhHHHHHHHHHHHhhc--CCCCCCCceec--cCCC----cccccc----cc------C----------------------
Q 007986 339 VDVQTGIKLIMNLCLA--DGFDMFPSLLV--TDGS----CMIDRR----MG------I---------------------- 378 (582)
Q Consensus 339 p~vq~~L~~IL~~~l~--~gfd~~p~Llv--~Dg~----~WmD~r----~g------r---------------------- 378 (582)
|.+++.+++..+.... +|+-. ... .+|. .|+|.. .+ |
T Consensus 133 p~l~~~~~~~~~~~d~~~~Gl~~---~~~~we~G~~~~~~w~~~~~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~~~ 209 (420)
T 2z07_A 133 PKLLAFHRWLYHARDPYRTGLVV---IVHPWESGMDNSPAWDKPLSRVPVENLPPYERRDVKHVNPEERPRKEDYDRYLS 209 (420)
T ss_dssp HHHHHHHHHHHHHHCTTCCSCCC---BSSGGGGTCTTCGGGHHHHHTCCC-----------CCSCC-------CHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCcee---eecCCCcCCCCCccccccccccCCCCcchhhhhhhhccccccCCcHHHHHHHHH
Confidence 7777777776654321 12110 000 1222 555531 01 1
Q ss_pred ---------------------CCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhh
Q 007986 379 ---------------------HGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKI 437 (582)
Q Consensus 379 ---------------------~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l 437 (582)
.+.+|++||++|.|++.+++|++.+|+ . +++++++++.+++.|++ ||.+.++.
T Consensus 210 ~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~lg~---~--a~~~~~~a~~~~~ai~~-~Wd~~~g~ 283 (420)
T 2z07_A 210 LLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVLLQE---D--PYEIEEWIVRGEVGLEA-LWDREAGF 283 (420)
T ss_dssp HHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHHTTC---C--CHHHHHHHHHHHHHHHH-TEETTTTE
T ss_pred HHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHHhCc---c--HHHHHHHHHHHHHHHHH-hhCcccCe
Confidence 134788999999999999999999987 2 56677888889999999 99865433
Q ss_pred hhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHHHHHHHHHHH
Q 007986 438 NEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLI 517 (582)
Q Consensus 438 ~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i 517 (582)
+. |+...++ - ..+ .....+.+++++++++++|+++|++.+
T Consensus 284 ~~-----------------------------d~~~~~g-~--------~~~--~~~~~~~~pL~~g~~~~~~a~~v~~~l 323 (420)
T 2z07_A 284 YF-----------------------------SWDLVAG-E--------PIA--VKTSAGFLPLFAGTPHQGRASLLAQEA 323 (420)
T ss_dssp EC-----------------------------CEETTTT-E--------ECC--CCBGGGGTHHHHTCSCHHHHHHHHHHH
T ss_pred eE-----------------------------eeeCCCC-C--------eec--cccHHhHHHHHcCCCCHHHHHHHHHHH
Confidence 10 0000000 0 011 134456778899999999999999998
Q ss_pred Hhhhhhhc--cCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCCCCccchHHHHHHHHHH
Q 007986 518 EAKWDDLV--GHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGGSWPTLLWQVSSDIVTY 577 (582)
Q Consensus 518 ~~~w~eLl--tp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGgvWPwLLg~y~~A~lk~ 577 (582)
. +++ +++||++++| .++ .++|.+||+|++||++.+.++.|+.|+
T Consensus 324 ~----~~~~~~~~gi~t~~~--~~~----------~y~~~~yw~gpvW~~~~~~~~~gL~~~ 369 (420)
T 2z07_A 324 E----RWGEKARYLLPSVDP--TSP----------FFEPGRYWRGPVWINVNWMVAEGFRDY 369 (420)
T ss_dssp H----HHTTTCSSSCBSBCT--TST----------TCCTTSTTSSCBCHHHHHHHHHHHHHT
T ss_pred H----HHhccCCCCcCcCCC--cCc----------ccCCcCCCCCCcchhHHHHHHHHHHHc
Confidence 6 677 9999999998 444 555679999999999999999998765
No 6
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=99.91 E-value=2.6e-23 Score=227.94 Aligned_cols=254 Identities=13% Similarity=0.153 Sum_probs=185.0
Q ss_pred CCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCC
Q 007986 225 LNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGE 304 (582)
Q Consensus 225 ~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge 304 (582)
-||..+|+||+.++++|++..|++++||++|+.++.+|. ..|.||+..
T Consensus 121 g~F~~~~~WDs~f~~~gLl~~~~~~~A~~~l~~~~~~~~----------~~G~IPng~---------------------- 168 (535)
T 2jg0_A 121 GRFREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEID----------TYGHIPNGN---------------------- 168 (535)
T ss_dssp TTBCSCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----------HHSSCCSBS----------------------
T ss_pred ccccccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhc----------cCCcccCCC----------------------
Confidence 599999999999999999999999999999999997763 268899821
Q ss_pred CccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHHHHHHHhhcCC-----------CCCCCceec-c----
Q 007986 305 SAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCLADG-----------FDMFPSLLV-T---- 366 (582)
Q Consensus 305 ~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~~IL~~~l~~g-----------fd~~p~Llv-~---- 366 (582)
. .+|.+++.++.|++++++|+++|+| +|+++ |.+.+.++|.++.-...+ -+.+. |.. -
T Consensus 169 r--~yY~~~sqPPl~~~~v~~~~~~~~~-~fL~~~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G~~-l~~y~~~~~ 244 (535)
T 2jg0_A 169 R--SYYLSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTL-LNRYWDDRD 244 (535)
T ss_dssp B--GGGTTCCCSCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSCE-EECCCCSCC
T ss_pred C--ccCCCCCCccHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHhCCcccCccccccceeecCCCCc-ceeeccCCC
Confidence 1 2678888888899999999999986 89888 555555554322111000 00100 100 0
Q ss_pred ------------------C---CCcccccc---------ccCC----C----------cceehhHHHHHHHHHHHHHHHh
Q 007986 367 ------------------D---GSCMIDRR---------MGIH----G----------HPLEIQALFYTALRCSREMLTV 402 (582)
Q Consensus 367 ------------------D---g~~WmD~r---------~gr~----G----------~pVEIQALwYnALr~aaeLa~~ 402 (582)
+ ..+|+|.+ .+|. | .+||+|||||+|++.+++|++.
T Consensus 245 ~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~la~lA~~ 324 (535)
T 2jg0_A 245 TPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKA 324 (535)
T ss_dssp SCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHHHHHHHH
Confidence 0 01233211 1231 2 6799999999999999999999
Q ss_pred cCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeeccc
Q 007986 403 SDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNL 482 (582)
Q Consensus 403 ~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v 482 (582)
+|+ .+.+++++++++.+++.|+++||.+..+. +++..
T Consensus 325 lG~---~~~a~~~~~~A~~lk~ai~~~fWdee~G~----------------------------------------y~D~~ 361 (535)
T 2jg0_A 325 AGD---NAMANQYETLANARQKGIEKYLWNDQQGW----------------------------------------YADYD 361 (535)
T ss_dssp HTC---HHHHHHHHHHHHHHHHHHHHHSEETTTTE----------------------------------------ECCEE
T ss_pred hCC---hHHHHHHHHHHHHHHHHHHHhCcCCCCCE----------------------------------------EEEEe
Confidence 987 67788899999999999999999865432 11100
Q ss_pred CCCccccccccccchhhhhcCCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCccCC-
Q 007986 483 QPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHNGG- 561 (582)
Q Consensus 483 ~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHNGg- 561 (582)
-..+.-.+.....+.+.+++++++++|+++|++.+.+ +|.+++|||++++ + +.+||+|+
T Consensus 362 ~~~~~~~~~~~~s~~~PL~~gi~~~e~a~~v~~~l~~---~l~t~~GlrT~s~--~---------------s~~yW~GpN 421 (535)
T 2jg0_A 362 LKSHKVRNQLTAAALFPLYVNAAAKDRANKMATATKT---HLLQPGGLNTTSV--K---------------SGQQWDAPN 421 (535)
T ss_dssp TTTTEECCCCBGGGGHHHHTTCSCHHHHHHHHHHHHH---HTEETTEECSBSC--C---------------CSSSSSTTE
T ss_pred CCCCCEeeeehhhhHHHHhcCCCCHHHHHHHHHHHHH---HhccCCCCCCCcC--C---------------CccccCCCC
Confidence 0000000134455667889999999999999999986 9999999999985 1 35899999
Q ss_pred CCccchHHHHHHHHHH
Q 007986 562 SWPTLLWQVSSDIVTY 577 (582)
Q Consensus 562 vWPwLLg~y~~A~lk~ 577 (582)
+||++.++++.|+.|+
T Consensus 422 vW~~~~~l~i~gL~~y 437 (535)
T 2jg0_A 422 GWAPLQWVATEGLQNY 437 (535)
T ss_dssp ECHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHc
Confidence 9999999999998775
No 7
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.78 E-value=9.3e-18 Score=194.52 Aligned_cols=262 Identities=16% Similarity=0.154 Sum_probs=178.9
Q ss_pred chHHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHH-hcCChHHHHHHHHHHHhhhhhhh
Q 007986 188 ETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFL-LKGEGEIVRNFLLHTLQLQSWEK 266 (582)
Q Consensus 188 ~~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL-~~G~pEiar~~L~~la~lQs~~~ 266 (582)
-+++.+.++..|+..+..+ |. .+ +...+..|.||+.+++++++ ..|+++++|+.|+.++..|
T Consensus 546 lN~l~~~a~~tl~~n~~~~---~t---D~-------p~REr~~W~gD~~~~a~~~l~~~g~~~lar~~L~~l~~~Q---- 608 (956)
T 2okx_A 546 LNATWEISRHTTRLCMEDT---FV---DC-------PSYEQVFWVGDSRNEALVNYYVFGETEIVERCLNLVPGSA---- 608 (956)
T ss_dssp HHHHHHHHHHHHHHTBSSS---BC---SC-------TTTTCCCBHHHHHHHHHHHHHHTCCCHHHHHHHHHGGGGT----
T ss_pred HHHHHHHHHHHHHHhcccC---cc---CC-------CcccCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc----
Confidence 4566666666777653321 21 11 12356799999999999974 6789999999999777433
Q ss_pred hcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHH
Q 007986 267 TVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQER--VDVQTG 344 (582)
Q Consensus 267 tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~ 344 (582)
..+|.+|..+ |+.. .....|.++||++++++|+++|||.+|+++ |.++++
T Consensus 609 ------~~dG~ip~~~-----------------p~~~-----~~~~~~~~~~~i~~~~~yy~~tGD~~~L~e~yp~lk~~ 660 (956)
T 2okx_A 609 ------DETPLYLDQV-----------------PSAW-----SSVIPNWTFFWILACREYAAHTGNEAFAARIWPAVKHT 660 (956)
T ss_dssp ------TTCTTCCSBS-----------------SCSS-----CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred ------ccCCCcCccc-----------------cccc-----cCCCcChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 2478999843 2211 125678999999999999999999999998 767776
Q ss_pred HHHHHHHhhcCCCCCCCceecc--CCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHH
Q 007986 345 IKLIMNLCLADGFDMFPSLLVT--DGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSAL 422 (582)
Q Consensus 345 L~~IL~~~l~~gfd~~p~Llv~--Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aL 422 (582)
++++.+....+| ++..+ .-.+|.|..-++.|.++..|+|+|.||+.+++|++.+|+ .+.+++++++++.|
T Consensus 661 l~~~~~~~d~~G-----Ll~~~~~~~~DW~d~~~~~~G~~~~~~a~~~~al~~~a~lA~~LG~---~~~a~~y~~~A~~l 732 (956)
T 2okx_A 661 LTHYLEHIDDSG-----LLNMAGWNLLDWAPIDQPNEGIVTHQNLFLVKALRDSRALAAAAGA---TEEADAFAARADLL 732 (956)
T ss_dssp HHHHHTTBCTTS-----SBCCSSCCCCCSSSCCCCSSSEEHHHHHHHHHHHHHHHHHHHHTTC---GGGGHHHHHHHHHH
T ss_pred HHHHHhcCCCCC-----CEEeCCCCccCccCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHhCC---hHHHHHHHHHHHHH
Confidence 666554332222 12112 125788752257889999999999999999999999987 45567788889999
Q ss_pred HHHHHHhhhcchhhhhhhhhccccccccccccccCCCCCCccccccccccCCCceeecccCCCccccccccccchhhhhc
Q 007986 423 SFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNIYPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVS 502 (582)
Q Consensus 423 k~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~ 502 (582)
++.|+++||.+..+.+ . +.+..++ +|. + .....+|++|+++
T Consensus 733 k~ai~~~~wd~~~g~y---~--------------------------d~~~~~g-------~~~--~-~~~~~s~~lall~ 773 (956)
T 2okx_A 733 AETINAVLWDEEKRAY---I--------------------------DCIHADG-------RRS--D-VYSMQTQVVAYLC 773 (956)
T ss_dssp HHHHHHHSEETTTTEE---C--------------------------SEECTTS-------CBC--C-CCBHHHHHHHHHT
T ss_pred HHHHHHHhcCCCCCEE---E--------------------------eeecCCC-------Ccc--c-ccccHHHHHHHHh
Confidence 9999999998654331 0 0000000 011 0 0124578889999
Q ss_pred CCCCHHHHHHHHHHHHhhhhhhccCCCceecCCCCCCCCceeeeCCCCCCCCCCCcc-CCCCccchHHHHHHHHH
Q 007986 503 SLGTPKQNESILNLIEAKWDDLVGHMPLKICYPALESEDWRIITGSDPKNTPWSYHN-GGSWPTLLWQVSSDIVT 576 (582)
Q Consensus 503 gLl~~eqa~~Ild~i~~~w~eLltp~gLR~l~P~l~d~~Wr~~~~gd~~nrp~SYHN-GgvWPwLLg~y~~A~lk 576 (582)
++++++|+++| +.+.+ +. |..||+ |++||+ +.++.|+.|
T Consensus 774 Gl~p~~~~~av-~~Ll~-------~~-------------------------~~gy~~~Gt~w~~--~~li~aLar 813 (956)
T 2okx_A 774 GVAQGEREAVI-EGYLS-------SP-------------------------PPAFVQIGSPFMS--FFYYEALEK 813 (956)
T ss_dssp TCSCHHHHHHH-HHHHH-------SC-------------------------CTTSBCCCSHHHH--HHHHHHHHH
T ss_pred CCCCHHHHHHH-HHHhc-------CC-------------------------CcccccCCChhHH--HHHHHHHHH
Confidence 99999998887 33332 10 457998 999986 555555554
No 8
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.75 E-value=3.3e-17 Score=185.09 Aligned_cols=203 Identities=16% Similarity=0.193 Sum_probs=146.2
Q ss_pred CCCcccchhHHHHHHHH-hcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCC
Q 007986 227 YDQVFIRDFVPSALAFL-LKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGES 305 (582)
Q Consensus 227 Y~~vfGRD~~IS~lglL-~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~ 305 (582)
-+..|..|+.|+++..+ ..++++++++.|..+ | |..|.. +
T Consensus 337 ER~~W~GD~~~~~~~~~~~~~~~~~~~~~l~~~---~-------------g~~p~~------------------~----- 377 (739)
T 3cih_A 337 DRWVWSGDAIQSYLMNYYLFFDSESVKRTIWLL---R-------------GKDPVT------------------S----- 377 (739)
T ss_dssp CCCCCHHHHHHHHHHHHTTTCCHHHHHHHHHHH---H-------------CCSSCC------------------S-----
T ss_pred ccceecCchHHHHHHHHHHhCCHHHHHHHHHHh---c-------------cCCCCc------------------c-----
Confidence 47899999999998854 567899888877532 1 334431 0
Q ss_pred ccCccCC-CCcHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHHHHHHHhhcCCCCCCCceeccC----CCccccccccC
Q 007986 306 AIGRVAP-VDSGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMNLCLADGFDMFPSLLVTD----GSCMIDRRMGI 378 (582)
Q Consensus 306 ~i~~ygs-VDAtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~~IL~~~l~~gfd~~p~Llv~D----g~~WmD~r~gr 378 (582)
++++ +|.++||++++++|+++|||.+++++ |.+++.++++++....+|+ +.... ..+|+|..+++
T Consensus 378 ---~~~~~~d~~l~wi~~~~~yy~~tGD~~~L~e~~p~l~~~ld~~~~~~d~~GL-----~~~~~G~W~~~dW~d~~~~~ 449 (739)
T 3cih_A 378 ---HSNTIMDYTFYWFLSVYDYYMYSGDRHFVNQLYPRMQTMMDYVLGRTNKNGM-----VEGMSGDWVFVDWADGYLDK 449 (739)
T ss_dssp ---SGGGBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTBCTTSC-----BCCCTTCBCCSCCCTTCCCC
T ss_pred ---ccCCccchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCC-----cccCCCCcccCCCcccccCC
Confidence 1233 79999999999999999999999998 6666666555443221221 12222 25898865788
Q ss_pred CCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccccccccccCC
Q 007986 379 HGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSTDATNKFNI 458 (582)
Q Consensus 379 ~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~~~a~n~fni 458 (582)
.|.++++|||||.||+.+++|++.+|+ .+.+++++++++.|++.|+++||.+.++.
T Consensus 450 ~G~~~~~~a~~y~al~~~a~lA~~lG~---~~~A~~y~~~A~~lk~a~~~~~wd~~~G~--------------------- 505 (739)
T 3cih_A 450 KGELSFEQVLFCRSLETMALCADLVGD---KDGQQKYEKLASALKAKLEPTFWNNQKQA--------------------- 505 (739)
T ss_dssp SSEEHHHHHHHHHHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHHHHHHHHEETTTTE---------------------
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHcCC---hHHHHHHHHHHHHHHHHHHHhccCcccCe---------------------
Confidence 999999999999999999999999987 67788899999999999999999864322
Q ss_pred CCCCccccccccccCCCceeecccCCCccccccccccchhhhhcCCCCHHHHHHHHHHHHh
Q 007986 459 YPEQIPSWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPKQNESILNLIEA 519 (582)
Q Consensus 459 ~p~~ip~~l~d~l~~~gGYL~~~v~P~~~D~R~~alGNlLAI~~gLl~~eqa~~Ild~i~~ 519 (582)
|..+..+....| ..+...|++|+++++++++++++|++.+..
T Consensus 506 ------------------y~~~~~~G~~~d-~~~~~s~~laL~~Gl~~~e~~~~v~~~L~~ 547 (739)
T 3cih_A 506 ------------------FVHNCVDGRQSD-AVTRYANMFSVFFDYLNADKQQAIKQSVLL 547 (739)
T ss_dssp ------------------ECSEEETTEECS-CCCHHHHHHHHHTTCSCHHHHHHHHHHTTT
T ss_pred ------------------eEeecCCCCcCc-ccchHHhHHHHHHCCCCHHHHHHHHHHHhc
Confidence 111111111111 123346788999999999999988877643
No 9
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.45 E-value=2.7e-12 Score=150.23 Aligned_cols=196 Identities=14% Similarity=0.120 Sum_probs=136.8
Q ss_pred hHHHHHHHHHHHHHhhhcccccCeeEeccCCCCC-----C-CC-CCCCcccchhHHHHHHHHhcCChHHHHHHHHHHHhh
Q 007986 189 TEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDK-----Q-PL-NYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTLQL 261 (582)
Q Consensus 189 ~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~-----~-a~-nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la~l 261 (582)
++++.++...|+.+. +..++.+.+||...+-- . .+ .|.-+|+||+.+++.+++..|.+++++.+|++|+.+
T Consensus 283 ~~~~~rSl~~Lk~l~--~~~t~GaiiAS~t~p~~e~~gg~rn~dgYry~W~RDaa~t~~all~~G~~e~A~~~l~~L~~~ 360 (1020)
T 1ulv_A 283 RTQYDVSLMTVKSHE--DKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEAAARGVEWLFTY 360 (1020)
T ss_dssp HHHHHHHHHHHHTTB--CSSSTTCBCSCSSCTTGGGSBCSSCCCTTCSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc--CCCCCCeEEEeCCCCcccccCCccCCCCCceEccchHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 456666666666642 22224566666432100 0 11 288899999999999999999999999999999987
Q ss_pred hhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhH
Q 007986 262 QSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDV 341 (582)
Q Consensus 262 Qs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~v 341 (582)
|.. ..|.++..+.+ .|+ +..+ . -..|.+.++++++++|.+ + |.+++. ..+
T Consensus 361 Q~~---------~~G~~~~~y~i--------~G~----~~w~-----~-~Q~D~~g~~l~~~~~~~~-~-d~~~w~-~~v 410 (1020)
T 1ulv_A 361 QQQ---------PDGHFPQTSRV--------DGT----IGQN-----G-IQLDETAFPILLANQIGR-T-DAGFYR-NEL 410 (1020)
T ss_dssp TCC---------TTSCCCSCBCT--------TSC----BCCC-----C-CBTHHHHHHHHHHHHHTC-C-CHHHHH-HTH
T ss_pred hcC---------CCCCeeeEEec--------CCC----cCCC-----C-ccCccchHHHHHHHHHHh-c-CHHHHH-HHH
Confidence 741 24555543311 021 1111 1 278999999999999975 4 533332 146
Q ss_pred HHHHHHHHHHhhcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHH
Q 007986 342 QTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSA 421 (582)
Q Consensus 342 q~~L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~a 421 (582)
+++++++.+. | + .++-..|-|+ .|+-....++.|.||+++++|++.+|+ .+.++++++.++.
T Consensus 411 ~~al~~i~~~----g----~---~~~~~~WEe~----~g~~~~t~~~~~~AL~~aa~lA~~~G~---~~~a~~w~~~Ad~ 472 (1020)
T 1ulv_A 411 KPAADYLVAA----G----P---KTPQERWEET----GGYSTSTLASQIAALAAAADIAGKNGD---AGSAAVYRATADE 472 (1020)
T ss_dssp HHHHHHHHHH----C----S---CBSBCTTSSC----CBEEHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHh----C----C---CCChhhhccc----CCcCHHHHHHHHHHHHHHHHHHHHcCC---hhHHHHHHHHHHH
Confidence 7777766554 2 1 3344568763 567788899999999999999999987 6788899999999
Q ss_pred HHHHHHHhhhcch
Q 007986 422 LSFHIREYYWVDM 434 (582)
Q Consensus 422 Lk~~f~~~FWld~ 434 (582)
|++.|+++||.++
T Consensus 473 i~~~i~~~~w~~~ 485 (1020)
T 1ulv_A 473 WQRSTEKWMFTTN 485 (1020)
T ss_dssp HHHTHHHHHEESS
T ss_pred HHHHHHHhCCCCc
Confidence 9999999999864
No 10
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=99.35 E-value=2.8e-11 Score=136.02 Aligned_cols=193 Identities=16% Similarity=0.124 Sum_probs=135.7
Q ss_pred cchHHHHHHHHHHHHHhhhcccccCeeE-eccCCC------CCCCCCCCCcccchhHHHHHHHHhcCChHHHHHHHHHHH
Q 007986 187 EETEIEKEAWRLLQEAVVTYCESPIGTV-AANDPG------DKQPLNYDQVFIRDFVPSALAFLLKGEGEIVRNFLLHTL 259 (582)
Q Consensus 187 ~~~~~~~~A~~~Lr~~~v~~~~~p~Gtl-AA~~~~------~~~a~nY~~vfGRD~~IS~lglL~~G~pEiar~~L~~la 259 (582)
+-+.++.+++..|+.+.. .+|-|.+ ||...+ ......|.-+|+||+.+++.+++..|+++.++.++++++
T Consensus 293 ~~~~~~~rs~~~Lk~l~~---~~~~G~iiAs~t~~~~e~~~~~~~~dY~~~W~RD~~~~~~al~~~G~~~~a~~~l~~l~ 369 (684)
T 1lf6_A 293 KANSLYYNSMMILKASED---KTNKGAYIASLSIPWGDGQRDDNTGGYHLVWSRDLYHVANAFIAAGDVDSANRSLDYLA 369 (684)
T ss_dssp TCCHHHHHHHHHHHTTBC---SSSTTCBCSCSSCTTGGGSBSBSCCGGGSBCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccC---CCCCccEEeecCCCCccccCCCCCCCCEEEeccHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345666666666666421 2456777 443110 001235899999999999999999999999999999999
Q ss_pred hhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhh
Q 007986 260 QLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERV 339 (582)
Q Consensus 260 ~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p 339 (582)
..|.. .|-++..+ | . +|+ |..| -...|++.+++++++.|. .+| + -+
T Consensus 370 ~~q~~----------~G~~~~~~---~----~-~G~----p~w~------~~Q~D~~g~~l~~~~~~~-~~g---~--~~ 415 (684)
T 1lf6_A 370 KVVKD----------NGMIPQNT---W----I-SGK----PYWT------GIQLDEQADPIILSYRLK-RYD---L--YD 415 (684)
T ss_dssp HHHHH----------HSSCCSCB---C----T-TSC----BCCC------CCCHHHHHHHHHHHHHTT-CGG---G--TT
T ss_pred hhcCC----------CCCcccce---e----C-CCC----cccC------CccccchHHHHHHHHHHH-HcC---c--hH
Confidence 87752 23344322 1 0 122 2211 135899999999998554 455 2 25
Q ss_pred h-HHHHHHHHHHHhhcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 007986 340 D-VQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNR 418 (582)
Q Consensus 340 ~-vq~~L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~r 418 (582)
. ++++++++++.- + .++...|-++ .|.-....+..|.||+++++|++.+|+ .+.+++++..
T Consensus 416 ~~v~~al~~i~~~~--------~---~~~~g~WE~~----~g~~~~t~~~~~~aL~~~a~lA~~~g~---~~~a~~~~~~ 477 (684)
T 1lf6_A 416 SLVKPLADFIIKIG--------P---KTGQERWEEI----GGYSPATMAAEVAGLTCAAYIAEQNKD---YESAQKYQEK 477 (684)
T ss_dssp TTHHHHHHHHHHHC--------S---SBSSCTTSSC----CBBCHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--------C---CCCccccccc----CCcCHHHHHHHHHHHHHHHHHHHHcCC---hHHHHHHHHH
Confidence 4 888888877642 1 2455568764 467678899999999999999999987 6788899999
Q ss_pred HHHHHHHHHHhhhcch
Q 007986 419 LSALSFHIREYYWVDM 434 (582)
Q Consensus 419 a~aLk~~f~~~FWld~ 434 (582)
+++|++.|+++||.++
T Consensus 478 a~~i~~~i~~~~w~~~ 493 (684)
T 1lf6_A 478 ADNWQKLIDNLTYTEN 493 (684)
T ss_dssp HHHHHHHHHHHHEESS
T ss_pred HHHHHHHHHHhccCCC
Confidence 9999999999999864
No 11
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=98.61 E-value=1.1e-06 Score=95.62 Aligned_cols=222 Identities=17% Similarity=0.182 Sum_probs=148.9
Q ss_pred hhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHH--HhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCC
Q 007986 203 VVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAF--LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPA 280 (582)
Q Consensus 203 ~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lgl--L~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~ 280 (582)
.|.+.+.|.-+|..+| -.+-|-||+.-=+.-. |+..++++ +..++-+...|..-...|+|. +...|.
T Consensus 87 tv~~~~~~~tfViTGD--------I~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~i~rq~~~i~~dPYa--NAF~~~ 155 (489)
T 2p0v_A 87 TVHFDGKEDTFVYTGD--------IHAMWLRDSGAQVWPYVQLANKDPEL-KKMLAGVINRQFKCINIDPYA--NAFNMN 155 (489)
T ss_dssp TEEECSSSCEEECCBS--------SSSEEHHHHHHHSGGGGGGGGGCHHH-HHHHHHHHHHHHHHHHHCTTC--SEECSS
T ss_pred heeeCCCCCEEEEeCC--------ccchhhcccHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHhccCccc--cccCCC
Confidence 4556677777777876 3478999987655543 46668877 778888888999888888886 333322
Q ss_pred -ceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhhc-CCCC
Q 007986 281 -SFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA-DGFD 358 (582)
Q Consensus 281 -sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l~-~gfd 358 (582)
... .|. ...+.+.|-. +.+=--+|+.=.+|.++++|++.|||.+++.+ .+.++++.|++.+.. +..+
T Consensus 156 ~~~~-~~~-----~d~t~~~P~v----~E~KyElDSla~~L~la~~Yy~~TgD~~~f~~-~w~~av~~il~~l~~eq~~~ 224 (489)
T 2p0v_A 156 SEGG-EWM-----SDLTDMKPEL----HERKWEIDSLCYPIRLAYHYWKTTGDASVFSD-EWLQAIANVLKTFKEQQRKD 224 (489)
T ss_dssp SCCC-GGG-----GSSSCCCTTE----EECCCCHHHHHHHHHHHHHHHHHHCCCTTSSH-HHHHHHHHHHHHHHHTTCSS
T ss_pred CCCC-CCC-----CCCCCCCccc----ccccchhhhhHHHHHHHHHHHHHhCCchhhHH-HHHHHHHHHHHHHHHHhccc
Confidence 111 110 0111122221 11112799999999999999999999999875 577888888887764 2211
Q ss_pred C------C--------Ccee-------c-cCCCcccccc----ccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHH
Q 007986 359 M------F--------PSLL-------V-TDGSCMIDRR----MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLV 412 (582)
Q Consensus 359 ~------~--------p~Ll-------v-~Dg~~WmD~r----~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a 412 (582)
. | ++|. | +-|+.|---| --++|+.+--|+..|.+|+.+++|++..+. ..+++
T Consensus 225 ~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa~~yg~~ipSN~~a~v~L~~aaeia~~v~~--d~~la 302 (489)
T 2p0v_A 225 DAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNR--KPALA 302 (489)
T ss_dssp CSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSC--CHHHH
T ss_pred CCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcchhcCcchHHHHHHHHHHHHHHHHHHHhcc--CHHHH
Confidence 1 1 0110 0 1133333222 136899999999999999999999999875 36889
Q ss_pred HHHHHHHHHHHHHHHHhhhcchhhhhhhhhcccccc
Q 007986 413 RAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEY 448 (582)
Q Consensus 413 ~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y 448 (582)
+++++.+..+++.|.++.|.+..+...+|.|..+.|
T Consensus 303 ~~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEVDG~ 338 (489)
T 2p0v_A 303 KECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGF 338 (489)
T ss_dssp HHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSS
T ss_pred HHHHHHHHHHHHHHHHhCEecCCCCccEEEEEecCC
Confidence 999999999999999999887543333555544444
No 12
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=98.52 E-value=4.2e-06 Score=89.58 Aligned_cols=239 Identities=15% Similarity=0.120 Sum_probs=158.5
Q ss_pred chHHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhH--HHHHHHHhcCChHHHHHHHHHHHhhhhhh
Q 007986 188 ETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFV--PSALAFLLKGEGEIVRNFLLHTLQLQSWE 265 (582)
Q Consensus 188 ~~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~--IS~lglL~~G~pEiar~~L~~la~lQs~~ 265 (582)
-..|.+.++--=-...|++.+.+.-+|..+| =.+-|-||+. +.-..-|+..++++ +..++-+...|..-
T Consensus 25 l~~lF~n~~pnTldTtv~~~~~~~tFviTGD--------I~AmWLRDS~~Ql~pY~~l~~~d~~l-~~li~G~I~rQ~~~ 95 (426)
T 3qry_B 25 WVDVFERCYTDTLDNTVEILEDGSTFVLTGD--------IPAMWLRDSTAQLRPYLHVAKRDALL-RQTIAGLVKRQMTL 95 (426)
T ss_dssp HHHHHHHHHHHHHHHSEEECTTSCEEECSSS--------SSEEEHHHHHHHHGGGHHHHTTCHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHHhccchhhheeEecCCCCEEEEeCC--------CcchhhccCHHHHHHhHHHhccCHHH-HHHHHHHHHHHHHH
Confidence 3456666654333445777777777888886 3378999998 44444467778887 66777888899988
Q ss_pred hhcccCCCCCCCCCCc-eeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHH
Q 007986 266 KTVDCYSPGQGLMPAS-FKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTG 344 (582)
Q Consensus 266 ~tld~~~~~~GliP~s-fKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~ 344 (582)
...|+|. +...|.. .. .|.. .. .++.....+.+=--+|+--.||-+.+.|++.|||.+++.+ .+.+|
T Consensus 96 i~~dPYa--NAF~~~~~~~-~~~~-----~d---~t~~~~~v~E~KyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a 163 (426)
T 3qry_B 96 VLKDPYA--NSFNIEENWK-GHHE-----TD---HTDLNGWIWERKYEVDSLCYPLQLAYLLWKETGETSQFDE-IFVAA 163 (426)
T ss_dssp HHHCTTC--SEEESSSCCC-SSTT-----TE---ESCCCTTEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHH
T ss_pred hccCccc--ccCCCCCCCC-CccC-----CC---CCCCCCeeEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHHH
Confidence 8888886 3333221 10 1100 00 0111112222334699999999999999999999999876 68899
Q ss_pred HHHHHHHhhc-CCCCCC------------Cceec--------cCCCcccccc----ccCCCcceehhHHHHHHHHHHHHH
Q 007986 345 IKLIMNLCLA-DGFDMF------------PSLLV--------TDGSCMIDRR----MGIHGHPLEIQALFYTALRCSREM 399 (582)
Q Consensus 345 L~~IL~~~l~-~gfd~~------------p~Llv--------~Dg~~WmD~r----~gr~G~pVEIQALwYnALr~aaeL 399 (582)
++.|++-+.. +..... ++|.- +-|..|--=| --.+||.+--|++..-||+.+++|
T Consensus 164 ~~~il~~~~~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~~~v~L~~~aei 243 (426)
T 3qry_B 164 TKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMTWSAFRPSDDCCQYSYLIPSNMFAVVVLGYVQEI 243 (426)
T ss_dssp HHHHHHHHHHTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSSBCSSSEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCceeeecCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHH
Confidence 9999876553 211110 01110 1233332111 126789999999999999999999
Q ss_pred HHh--cCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccc
Q 007986 400 LTV--SDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYS 449 (582)
Q Consensus 400 a~~--~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~ 449 (582)
+.. ..+ ..++++++++.+..+++.|.++..++..+.-.||.|..+.|+
T Consensus 244 ~~~~~v~~--d~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~G 293 (426)
T 3qry_B 244 FAALNLAD--SQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGLG 293 (426)
T ss_dssp HHHHTCTT--HHHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEECSEECSSS
T ss_pred HHhccccC--cHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCC
Confidence 984 322 368899999999999999999998876655566766666654
No 13
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=98.43 E-value=1.2e-05 Score=86.17 Aligned_cols=238 Identities=16% Similarity=0.121 Sum_probs=156.5
Q ss_pred chHHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhH--HHHHHHHhcCChHHHHHHHHHHHhhhhhh
Q 007986 188 ETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFV--PSALAFLLKGEGEIVRNFLLHTLQLQSWE 265 (582)
Q Consensus 188 ~~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~--IS~lglL~~G~pEiar~~L~~la~lQs~~ 265 (582)
-..|.+.++--=-...|++ +.|.-+|..+| =.+-|-||+. +.-..-|+..+++++ ..++-+...|..-
T Consensus 28 l~~lF~n~~pnTldTtv~~-~~~~tFviTGD--------I~AmWLRDS~~Ql~pY~~l~~~d~~l~-~li~G~I~rQ~~~ 97 (427)
T 3qt9_A 28 LQELFYNCFINTMDTTVEV-SEGDAFVITGD--------IPAMWLRDSTSQVEHYLPFVKEYPELK-AIFTGLINRQVKC 97 (427)
T ss_dssp HHHHHHHHHHHHHHHTEEE-ETTEEEECCBS--------SCSEEHHHHHHHTGGGGGGTTTCGGGH-HHHHHHHHHHHHH
T ss_pred HHHHHHHhcccchhheeEe-CCCCEEEEeCC--------CcchhhccCHHHHhhhHHHhccCHHHH-HHHHHHHHHHHHH
Confidence 3456666654333445666 66677778886 2378999998 333334677788877 6777888889988
Q ss_pred hhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHH
Q 007986 266 KTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGI 345 (582)
Q Consensus 266 ~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L 345 (582)
...|+|. +...|..-.=.|. .+ .++.....+.+=--+|+--.+|-+.+.|++.|||.+++.+ .+.+|+
T Consensus 98 i~~dPYa--NAF~~~~~~~~~~-------~d--~t~~~~~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~ 165 (427)
T 3qt9_A 98 IFIDPYA--NAFNKEPNGQKWD-------ND--ITKDSPWVWERKYEIDSLCYPVRLIHKYWKESGDETFFNY-DIKKAF 165 (427)
T ss_dssp HHHCTTC--SEECSSSCCCCSS-------CC--BSCCCTTEEECCCCTHHHHHHHHHHHHHHHHHCCCTTCCH-HHHHHH
T ss_pred hccCccc--ccCCCCCCCcCcC-------CC--CCCCCCceEeeccHHhhhHHHHHHHHHHHHhhCChhhhhH-HHHHHH
Confidence 8888886 3333321000010 00 0111112222334699999999999999999999999875 688999
Q ss_pred HHHHHHhhcCC---------CC---C--CCceec--------cCCCcccccc----ccCCCcceehhHHHHHHHHHHHHH
Q 007986 346 KLIMNLCLADG---------FD---M--FPSLLV--------TDGSCMIDRR----MGIHGHPLEIQALFYTALRCSREM 399 (582)
Q Consensus 346 ~~IL~~~l~~g---------fd---~--~p~Llv--------~Dg~~WmD~r----~gr~G~pVEIQALwYnALr~aaeL 399 (582)
+.|++-+..+. |. . .++|.- +-|..|--=| --.+||.+--|++..-||+.+++|
T Consensus 166 ~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~vaL~~~aei 245 (427)
T 3qt9_A 166 NMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGFRPSDDACEYGYLIPANMFAVVALRYISEI 245 (427)
T ss_dssp HHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCCCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHH
Confidence 99986544211 11 0 011110 1233332111 126789999999999999999999
Q ss_pred HHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhhhhhhhhccccccc
Q 007986 400 LTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYS 449 (582)
Q Consensus 400 a~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~l~~iyr~~te~y~ 449 (582)
+...+. ..++++++++.+..+++.|.++..++..+.-.||.|..+.|+
T Consensus 246 ~~~l~~--d~~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAyEVDG~G 293 (427)
T 3qt9_A 246 AEKVYK--DEELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGMG 293 (427)
T ss_dssp HHHTSC--CHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSSS
T ss_pred HHHhcc--CHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccCC
Confidence 998853 368999999999999999999998876555566666666554
No 14
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=98.37 E-value=1.4e-05 Score=87.06 Aligned_cols=195 Identities=15% Similarity=0.058 Sum_probs=120.4
Q ss_pred cccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcCC--------hHHHHHHHHHHHhhhhhhhhcccCCCCCCCCC
Q 007986 208 ESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGE--------GEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMP 279 (582)
Q Consensus 208 ~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~--------pEiar~~L~~la~lQs~~~tld~~~~~~GliP 279 (582)
+.|-|.|.|+.+. .-+.|.-+|.||+.+++.+++..|. .+.++.++...+.+|.... ..|-++
T Consensus 46 ~~~~GaiIASptt--snpDYrY~W~RDaa~t~~aL~~~g~~~~~~~~l~~~a~~y~~~~~~lq~~~~-------~~G~~~ 116 (492)
T 2fba_A 46 NGVPGTVIASPST--SNPDYYYQWTRDSAITFLTVLSELEDNNFNTTLAKAVEYYINTSYNLQRTSN-------PSGSFD 116 (492)
T ss_dssp TSCTTCBCSCSCB--SSSBCCSEEHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTSCB-------TTBCTT
T ss_pred CCCCCeEEEeCCC--CCCCCeEEccchHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHhcccC-------CCCCcC
Confidence 4456777444321 2367999999999999999886665 8889999987666664321 134343
Q ss_pred C-ceeeccccCCCc-cccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHH--------h------hhhHHH
Q 007986 280 A-SFKVRNVPLESN-KFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQ--------E------RVDVQT 343 (582)
Q Consensus 280 ~-sfKI~h~~~r~~-~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl--------~------~p~vq~ 343 (582)
. ...++- |.+.. +|+ +..+ + +.----|.+-+.++++.+|.+...+.... . +..+.+
T Consensus 117 ~~~~~glg-ep~y~vdG~----~~~~--~-w~~~Q~D~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (492)
T 2fba_A 117 DENHKGLG-EPKFNTDGS----AYTG--A-WGRPQNDGPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKN 188 (492)
T ss_dssp SGGGGGGG-CCEECTTSC----BCCS--C-CSCCBTTHHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHHH
T ss_pred cccccccC-ceeeccCCC----cCCc--c-cCCccccchhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHHH
Confidence 1 111110 00000 122 1101 1 11245799999999999987665433321 0 111234
Q ss_pred HHHHHHHHhhcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHH
Q 007986 344 GIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALS 423 (582)
Q Consensus 344 ~L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk 423 (582)
.|+..++++...|-. +|-..|-. |.|+=....+--+.||.++++|++..++ .+.++++.+.++.++
T Consensus 189 ~i~~~l~~v~~~w~~-------pd~dlWEe----r~g~~~~T~~~~~~AL~~aa~lA~~~g~---~~~a~~w~~~ad~i~ 254 (492)
T 2fba_A 189 IIKPDLEYVIGYWDS-------TGFDLWEE----NQGRHFFTSLVQQKALAYAVDIAKSFDD---GDFANTLSSTASTLE 254 (492)
T ss_dssp THHHHHHHHHHHTTS-------CEECTTSC----CEECCHHHHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-------CCCCCcCc----cCCCChHHHHHHHHHHHHHHHHHHHcCC---chHHHHHHHHHHHHH
Confidence 555566665543211 33346643 3366667889999999999999999886 677888888888899
Q ss_pred HHHHHh---hhcc
Q 007986 424 FHIREY---YWVD 433 (582)
Q Consensus 424 ~~f~~~---FWld 433 (582)
..+.+. ||.+
T Consensus 255 ~~I~~~~~~~w~~ 267 (492)
T 2fba_A 255 SYLSGSDGGFVNT 267 (492)
T ss_dssp HHHHSTTTCCEET
T ss_pred HHHHHhhhcCCCC
Confidence 988887 8864
No 15
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=98.31 E-value=1.8e-05 Score=85.54 Aligned_cols=217 Identities=16% Similarity=0.175 Sum_probs=144.6
Q ss_pred ccCeeEeccCCCCCCCCCCCCcccchhHHHHHHH--HhcCChHHHHHHHHHHHhhhhhhhhcccCCCCCCCCCC--ceee
Q 007986 209 SPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAF--LLKGEGEIVRNFLLHTLQLQSWEKTVDCYSPGQGLMPA--SFKV 284 (582)
Q Consensus 209 ~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lgl--L~~G~pEiar~~L~~la~lQs~~~tld~~~~~~GliP~--sfKI 284 (582)
.|.-+|..+| =.+-|-||+.-=+.-. |+..++++ +..++-+...|..--..|+|. +...|. +. -
T Consensus 75 ~~~tFviTGD--------I~AmWLRDS~~Q~~pYl~l~~~d~~l-~~li~G~I~rQ~~~i~~dPYa--NAF~~~~~sg-~ 142 (463)
T 3p2c_A 75 KPDTFVYTGD--------IHAMWLRDSGAQVWPYVQLANSDPEL-KEMLAGVILRQFKCINIDPYA--NAFNDGAIPD-G 142 (463)
T ss_dssp CEEEEECCBS--------SCSEEHHHHHHHTGGGGGGGGGCHHH-HHHHHHHHHHHHHHHHHCTTC--SEECSSCCTT-C
T ss_pred CCCEEEEeCC--------CcchhcccCHHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHhccCccc--cccCCCCCCC-C
Confidence 3555667776 2378999987655543 46678877 667888888999888778886 333322 11 0
Q ss_pred ccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhhc-CCCCC---C
Q 007986 285 RNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLA-DGFDM---F 360 (582)
Q Consensus 285 ~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l~-~gfd~---~ 360 (582)
.|. ...+ +.....+.+=--+|+--.+|-+.++|++.|||.+++.+ .+.+|++.|++-+.. +..+. |
T Consensus 143 ~~~------~d~t---~~~p~v~ErKyElDSL~~~l~La~~y~~~Tgd~~~f~~-~w~~a~~~il~~~~~~q~~~~~s~Y 212 (463)
T 3p2c_A 143 HWM------SDLT---DMKPELHERKWEIDSLCYPLRLAYHYWKTTGDASIFNE-EWIQAITNVLKTFKEQQRKDGVGPY 212 (463)
T ss_dssp TTT------TSBS---CCCTTEEECCCCHHHHHHHHHHHHHHHHHHCCCTTCSH-HHHHHHHHHHHHHHHTTCSSSSCSC
T ss_pred ccc------CCCC---CCCCcEEEEecHhhhhhHHHHHHHHHHHhhCChhhhcH-HHHHHHHHHHHHHHHHhccCCCCCc
Confidence 010 0001 01111112334699999999999999999999999865 688999999876553 22221 1
Q ss_pred ----------Cceec--------cCCCcccccc----ccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 007986 361 ----------PSLLV--------TDGSCMIDRR----MGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNR 418 (582)
Q Consensus 361 ----------p~Llv--------~Dg~~WmD~r----~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~r 418 (582)
++|.- +-|..|--=| --.+||.+--|++..-+|+.+++|+..++. ..++++++++.
T Consensus 213 ~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~--d~~la~~~~~l 290 (463)
T 3p2c_A 213 KFQRKTERALDTVSNDGLGAPVKPVGLIVSSFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNK--KTALSKECKDL 290 (463)
T ss_dssp CCBCCBSCGGGSCHHHHTCSCCCCSSCCBCSBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSC--CHHHHHHHHHH
T ss_pred eEeecCCCCCcccCCCCcCCCcCCCCceecCCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhcc--CHHHHHHHHHH
Confidence 01110 1233332111 126789999999999999999999998754 37899999999
Q ss_pred HHHHHHHHHHhhhcchhhhhhhhhccccccc
Q 007986 419 LSALSFHIREYYWVDMKKINEIYRYKTEEYS 449 (582)
Q Consensus 419 a~aLk~~f~~~FWld~~~l~~iyr~~te~y~ 449 (582)
+..+++.|.++.+++..+.-.||.|..+.|+
T Consensus 291 A~eIr~gI~k~gvv~~p~~G~iyAyEVDG~G 321 (463)
T 3p2c_A 291 AQEVETALKKYAVYNHPKYGKIYAFEVDGFG 321 (463)
T ss_dssp HHHHHHHHHHHSEEEETTTEEEECSEECSSS
T ss_pred HHHHHHHHHHhCEecCCCCceEEEEEEecCC
Confidence 9999999999998875555456666555554
No 16
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=98.24 E-value=6.6e-05 Score=83.67 Aligned_cols=187 Identities=13% Similarity=0.010 Sum_probs=113.8
Q ss_pred cccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHH----hcCChHHHHHHHHHHHh---hhhhhhhcccCCCCCCCCCC
Q 007986 208 ESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFL----LKGEGEIVRNFLLHTLQ---LQSWEKTVDCYSPGQGLMPA 280 (582)
Q Consensus 208 ~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL----~~G~pEiar~~L~~la~---lQs~~~tld~~~~~~GliP~ 280 (582)
+.|-|.+.|+.+. .-+.|+-+|.||+.+++.+++ ..|..++++.++.++.. +|.+ +. ..|..|.
T Consensus 30 ~~~tGaiIAsptt--s~pDYrY~W~RDaa~t~~aL~~~~~~~G~~~~a~~~~~~l~~~~~lQ~~------y~-~~G~~~~ 100 (599)
T 2vn4_A 30 GTSAGAVIASPST--IDPDYYYMWTRDSALVFKNLIDRFTETYDAGLQRRIEQYITAQVTLQGL------SN-PSGSLAD 100 (599)
T ss_dssp TSCTTCBCSCSCC--SSSCCCSEEHHHHHHHHHHHHHHHHHSBCHHHHHHHHHHHHHHHHHHHC------CB-TTBCSTT
T ss_pred CCCCceEEEECCC--CCCCCeEEchhhHHHHHHHHHHHHHhCCCHHHHHHHHHHHhcccceeee------eC-CCCCccc
Confidence 4456666443221 236799999999999999998 89999999999999974 5532 22 2455442
Q ss_pred ceeeccccCCCccccccccCCCCCC---ccCccCCCCc-----HHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHh
Q 007986 281 SFKVRNVPLESNKFEEVLDPDFGES---AIGRVAPVDS-----GLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLC 352 (582)
Q Consensus 281 sfKI~h~~~r~~~ge~~l~pd~Ge~---~i~~ygsVDA-----tLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~ 352 (582)
. +.+ ||.....| |.. +.++ ---|. +-..+++++ +..+|+.++++. .+.+.|+.+++++
T Consensus 101 ~-~~l--------~E~~~~ld-G~~~~~~w~~-~Q~D~~glr~~~~~~~~~~--~~~~g~~~~~~~-~~w~~v~~~l~~v 166 (599)
T 2vn4_A 101 G-SGL--------GEPKFELT-LKPFTGNWGR-PQRDGPALRAIALIGYSKW--LINNNYQSTVSN-VIWPIVRNDLNYV 166 (599)
T ss_dssp S-GGG--------GCCEECTT-SCBCCSCCSC-CCTHHHHHHHHHHHHHHHH--HHHTTCHHHHHH-HTHHHHHHHHHHH
T ss_pred c-cCc--------CceEEecC-CccccCcCCC-eeccccchhHHHHHHHHHH--HHHhCCcccccH-HHHHHHHHHHHHH
Confidence 1 011 11101111 111 1111 23444 334555554 457898877654 1234455555555
Q ss_pred hcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhc
Q 007986 353 LADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWV 432 (582)
Q Consensus 353 l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWl 432 (582)
...+-. +|-..|-. |.|+-....+--+.||.++++|++.+|+ . +.++.+.+..++..+ ++||.
T Consensus 167 ~~~w~~-------~d~dlWEe----r~g~~~~T~~~~~~aL~~aa~lA~~~g~--~---~~~w~~~ad~i~~~i-~~~w~ 229 (599)
T 2vn4_A 167 AQYWNQ-------TGFDLWEE----VNGSSFFTVANQHRALVEGATLAATLGQ--S---GSAYSSVAPQVLCFL-QRFWV 229 (599)
T ss_dssp HHHTTS-------CEECTTSC----CEEEEHHHHHHHHHHHHHHHHHHHHHTC--C---CHHHHHHHHHHHHHH-GGGEE
T ss_pred HHhCCC-------CCCCeeee----cCCcchHHHHHHHHHHHHHHHHHHHcCC--C---HHHHHHHHHHHHHHH-HhhcC
Confidence 432211 23346643 3455566788999999999999999886 2 456677777888888 88997
Q ss_pred ch
Q 007986 433 DM 434 (582)
Q Consensus 433 d~ 434 (582)
+.
T Consensus 230 ~~ 231 (599)
T 2vn4_A 230 SS 231 (599)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 17
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=98.17 E-value=0.00011 Score=79.94 Aligned_cols=181 Identities=12% Similarity=0.059 Sum_probs=111.1
Q ss_pred cccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHH---hcCChHHHHHHHHHHHh---hhhhhhhcccCCCCCCCCC--
Q 007986 208 ESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFL---LKGEGEIVRNFLLHTLQ---LQSWEKTVDCYSPGQGLMP-- 279 (582)
Q Consensus 208 ~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL---~~G~pEiar~~L~~la~---lQs~~~tld~~~~~~GliP-- 279 (582)
++|-|.+.|+.+. .-+.|+-+|.||+.+++.+++ ..|..++++.++.++.. +|.... ..|-++
T Consensus 31 ~~~tGaiIASptt--snpDYrY~W~RDaa~t~~aL~~~~~~G~~~~a~~~~~~l~~~~~lQ~~~~-------~~G~l~~~ 101 (472)
T 1gai_A 31 GADSGIVVASPST--DNPDYFYTWTRDSGLVIKTLVDLFRNGDTDLLSTIEHYISSQAIIQGVSN-------PSGDLSSG 101 (472)
T ss_dssp TCCTTCBCSCSCB--SSSBCCSEEHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHCCB-------TTBCTTTT
T ss_pred CCCCceEEeeCCC--CCCCCeEEchhhHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhcccC-------CCCccccC
Confidence 4455666443221 236799999999999999998 88998888888887765 442211 134343
Q ss_pred ----CceeeccccCCCccccccccCCCCCCccCccCCCCc-----HHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHH
Q 007986 280 ----ASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDS-----GLWWIILLRAYGKITGDYALQERVDVQTGIKLIMN 350 (582)
Q Consensus 280 ----~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDA-----tLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~ 350 (582)
-.+. + +|+... ++.| ----|. +-..+++.+ +..+|+.++++. .+.+.++..++
T Consensus 102 glgE~~y~-----v---dG~~~~-~~w~------~~Q~D~~g~ra~~~~~~~~~--l~~~g~~~~~~~-~~w~~i~~~l~ 163 (472)
T 1gai_A 102 GLGEPKFN-----V---DETAYT-GSWG------RPQRDGPALRATAMIGFGQW--LLDNGYTSAATE-IVWPLVRNDLS 163 (472)
T ss_dssp GGGCCEEC-----T---TSCBCC-SCCS------CCCTHHHHHHHHHHHHHHHH--HHHTTCHHHHHH-THHHHHHHHHH
T ss_pred CCCCceEc-----c---CCCccC-CcCC------CccccccchhHHHHHHHHHH--HHHcCCccccch-hHHHHHHHHHH
Confidence 2221 1 122100 1111 123565 334455654 566788776543 24445555666
Q ss_pred HhhcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhh
Q 007986 351 LCLADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYY 430 (582)
Q Consensus 351 ~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~F 430 (582)
++...|-. +|-..|-. |.|+=..-.+--+.||.++++|++.+++ . +.++.+.+..++..+ ++|
T Consensus 164 ~v~~~w~~-------pd~dlWEe----r~g~~~~T~~~~~~AL~~aa~lA~~~g~---~--~~~w~~~ad~I~~~i-~~~ 226 (472)
T 1gai_A 164 YVAQYWNQ-------TGYDLWEE----VNGSSFFTIAVQHRALVEGSAFATAVGS---S--CSWCDSQAPQILCYL-QSF 226 (472)
T ss_dssp HHHHHTTS-------CEECTTSC----CEEEEHHHHHHHHHHHHHHHHHHHHTTC---C--CHHHHHHHHHHHHHH-GGG
T ss_pred HHHHhcCC-------CCCCCCcc----cCCCCHHHHHHHHHHHHHHHHHHHHcCC---c--HHHHHHHHHHHHHHH-Hhh
Confidence 65533211 23346643 3466677889999999999999999886 2 456777778888888 888
Q ss_pred hc
Q 007986 431 WV 432 (582)
Q Consensus 431 Wl 432 (582)
|.
T Consensus 227 w~ 228 (472)
T 1gai_A 227 WT 228 (472)
T ss_dssp BC
T ss_pred cC
Confidence 84
No 18
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=93.67 E-value=0.35 Score=55.24 Aligned_cols=81 Identities=12% Similarity=0.035 Sum_probs=48.8
Q ss_pred HHHHHHHHHHHHHHhCChhHHhh---hhHHHHHHHHHHHhhcCC-CCCCCceeccCCCccccccccCCCcceehhHHHHH
Q 007986 316 GLWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLADG-FDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYT 391 (582)
Q Consensus 316 tLWfIIaL~~Y~k~TGD~~fl~~---p~vq~~L~~IL~~~l~~g-fd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYn 391 (582)
+.|...++++|+++|||.+|+++ |-+..+.+...+.+..+. ...+...-|..+..+-+. . --+...|+++..
T Consensus 429 ~a~ia~a~~~yy~~T~D~~fL~~~g~~~l~e~A~Fw~s~~~~~~~~g~y~i~~VtgPdEy~e~---v-~nn~ytn~~a~~ 504 (754)
T 1h54_A 429 NGDIAFAIYNYTRYTGDDSYVLHEGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADEYENN---V-DNNWDTNMLAQW 504 (754)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTTTHHHHHHHHHHHHHHHHCEEETTTTEEECCSBCCSSTTSCS---B-SCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCHHHHHhCChHHHHHHHHHHHHheEEeCCCCEEEEccccCcccccCC---C-CCcHHHHHHHHH
Confidence 58889999999999999999986 555555555455543221 011110001111111100 1 134678999999
Q ss_pred HHHHHHHHH
Q 007986 392 ALRCSREML 400 (582)
Q Consensus 392 ALr~aaeLa 400 (582)
.|+.+.+++
T Consensus 505 ~l~~a~~~~ 513 (754)
T 1h54_A 505 TLKYTLEIL 513 (754)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999987
No 19
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=90.76 E-value=0.71 Score=53.04 Aligned_cols=175 Identities=10% Similarity=0.076 Sum_probs=93.7
Q ss_pred CcccchhHH------HHHHHHhcCChHHHHHHHHHHHhhhhhhhhcccC-CCCCC-CCCCceeeccccCCCccccccccC
Q 007986 229 QVFIRDFVP------SALAFLLKGEGEIVRNFLLHTLQLQSWEKTVDCY-SPGQG-LMPASFKVRNVPLESNKFEEVLDP 300 (582)
Q Consensus 229 ~vfGRD~~I------S~lglL~~G~pEiar~~L~~la~lQs~~~tld~~-~~~~G-liP~sfKI~h~~~r~~~ge~~l~p 300 (582)
..|+-|..+ ..+-++..+.||+++.+|.....+...-+.-++. .--+| +.|.+- +.. +. ..|
T Consensus 363 ~~W~g~y~~n~N~em~ywP~~~~n~pE~~~~ll~y~~~~l~~ar~~A~~~~G~~Ga~~p~~t----d~w----~~--~~p 432 (803)
T 2rdy_A 363 APWSSNYTLNINAEMNYWPAETCNLAELHKPLIHFIERLAANGKKTAEINYGARGWVAHHNA----DLW----GQ--TAP 432 (803)
T ss_dssp CGGGGCEETTTHHHHHTTTTTTTTCGGGGHHHHHHHHHHHHHHHHHHHHHHCCSSCCCCSEE----CTT----CC--CSC
T ss_pred CCCCccceeehhhhhhHhhhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEeecc----ccc----cc--cCC
Confidence 377777662 2222346779999999998776554432211221 11234 444311 000 00 001
Q ss_pred C--CCCC-ccCccCCCCcHHHHHHHHHHHHHHhCChhHHhh---hhHHHHHHHHHHHhhcCC---CCCCCceeccCCCcc
Q 007986 301 D--FGES-AIGRVAPVDSGLWWIILLRAYGKITGDYALQER---VDVQTGIKLIMNLCLADG---FDMFPSLLVTDGSCM 371 (582)
Q Consensus 301 d--~Ge~-~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~---p~vq~~L~~IL~~~l~~g---fd~~p~Llv~Dg~~W 371 (582)
. +|.. +-..+.+. .+.|...++++|+++|||.+|+++ |-+..+.+..++++..+. +...|.. -||-. .
T Consensus 433 ~g~~G~~~~~~~~w~~-~~awla~~lw~yy~~TgD~~fL~~~~~p~l~e~A~F~~~~l~~~~~g~y~i~p~~-sPE~~-~ 509 (803)
T 2rdy_A 433 VGDFGHGDPVWAFWPM-GGVWLTQHLWEHYTFGEDEAYLRDTAYPIMKEAALFCLDWLIENEAGYLVTSPST-SPEQR-F 509 (803)
T ss_dssp CSGGGTSCHHHHCCCC-HHHHHHHHHHHHHHHHCCHHHHHHTHHHHHHHHHHHHHHHCEECTTSCEECSSBC-BTTBC-E
T ss_pred ccccCCCCcccccccc-hHHHHHHHHHHHHHhhCCHHHHHhhchHHHHHHHHHHHHhhEECCCCcEEECCCC-ccccc-c
Confidence 1 0010 10001111 257889999999999999999987 767777777677665432 1111111 12210 0
Q ss_pred ccc--cccCCCcceehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 007986 372 IDR--RMGIHGHPLEIQALFYTALRCSREMLTVSDGSGSNNLVRAINNR 418 (582)
Q Consensus 372 mD~--r~gr~G~pVEIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~r 418 (582)
..+ .....--+...|+++...|+.+.++++.++. ..+..++|++.
T Consensus 510 ~~~g~~~~~~~n~tytn~~~~~~l~~a~~a~~~Lg~--~~~~~~~w~~~ 556 (803)
T 2rdy_A 510 RIGEKGYAVSSATTMDLSLIAECFDNCIQAAKRLSI--DEDFVKALSDA 556 (803)
T ss_dssp EETTEEECCBSCCHHHHHHHHHHHHHHHHHHHHTTC--CHHHHHHHHHH
T ss_pred cCCCcccccccChHHHHHHHHHHHHHHHHHHHHHCc--CHHHHHHHHHH
Confidence 000 0000112678899999999999999999875 34555555554
No 20
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=63.91 E-value=9.5 Score=44.57 Aligned_cols=84 Identities=14% Similarity=0.110 Sum_probs=50.9
Q ss_pred cHHHHHHHHHHHHHHhCChhHHhh--hhHHHHHHHHHH-HhhcCCCCCCCceeccCCCccccccc-cCCC-----cceeh
Q 007986 315 SGLWWIILLRAYGKITGDYALQER--VDVQTGIKLIMN-LCLADGFDMFPSLLVTDGSCMIDRRM-GIHG-----HPLEI 385 (582)
Q Consensus 315 AtLWfIIaL~~Y~k~TGD~~fl~~--p~vq~~L~~IL~-~~l~~gfd~~p~Llv~Dg~~WmD~r~-gr~G-----~pVEI 385 (582)
...|....+++|+++|||.+|+++ |-+..+.+..++ ++..+.. + .+|...+.+-+ |-++ -+...
T Consensus 507 ~~aWla~~lweyy~yTgD~~fL~~~yPlLkeaA~F~~d~~l~~~~~--~-----~~G~~vi~ps~SPE~~~~~~~~~tyd 579 (899)
T 2eab_A 507 AVPWILQNVYEAYEYSGDPALLDRVYALLKEESHFYVNYMLHKAGS--S-----SGDRLTTGVAYSPEQGPLGTDGNTYE 579 (899)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCEECCG--G-----GCSSEECSEEEETTEEEEEEECCHHH
T ss_pred hHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhheEecCc--C-----CCCeEEEccccCCCCCCCCCCCcHHH
Confidence 457888999999999999999944 666666666666 3322210 0 01111111101 1111 13467
Q ss_pred hHHHHHHHHHHHHHHHhcCC
Q 007986 386 QALFYTALRCSREMLTVSDG 405 (582)
Q Consensus 386 QALwYnALr~aaeLa~~~g~ 405 (582)
|++....|..+.+.++.++.
T Consensus 580 n~l~~~ll~~~i~aa~~Lg~ 599 (899)
T 2eab_A 580 SSLVWQMLNDAIEAAKAKGD 599 (899)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhCc
Confidence 88888888888888876653
No 21
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=39.86 E-value=2e+02 Score=29.32 Aligned_cols=98 Identities=10% Similarity=-0.027 Sum_probs=55.1
Q ss_pred cCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhhcCCCCCCCceeccCCCccccccccCCCc------ce
Q 007986 310 VAPVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCLADGFDMFPSLLVTDGSCMIDRRMGIHGH------PL 383 (582)
Q Consensus 310 ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~------pV 383 (582)
-++++-++ +++++.++++.|||..+++. .+++.+|+.+.+.... ..+-||.+- ...|. -.
T Consensus 147 knaisN~~-~~~~la~l~~~tgd~~Yl~~--A~~~~~w~~~~l~d~~------g~v~Dg~~~-----~~~g~~~~~~~~t 212 (349)
T 3k7x_A 147 KNTPVNAP-FIILSCWLYNELNETKYLEW--AMKTYEWQTKVLVRED------GFVEDGINR-----LEDGTIDYEWKFT 212 (349)
T ss_dssp EEHHHHHH-HHHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHBCTT------SCBCCEECT-----TSSSCBCTTCCCH
T ss_pred cchhhHHH-HHHHHHHHHHHhCCHHHHHH--HHHHHHHHHhcCCCCC------CeEecCCcc-----CCCCccCCcCeee
Confidence 35564444 77788888899999998887 6777888777543221 112232110 01122 23
Q ss_pred ehhHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhh
Q 007986 384 EIQALFYTALRCSREMLTVSDGSGSNNLVRAINNRLSALSFHIREYYW 431 (582)
Q Consensus 384 EIQALwYnALr~aaeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FW 431 (582)
+-|+. .|-.+++|.+..++ +.+. +++..|-..+.++||
T Consensus 213 Ynqg~---~l~g~~~LY~~T~d---~~yl----~~a~~l~~~~~~~f~ 250 (349)
T 3k7x_A 213 YNQGV---YIGANLELYRITKE---AIYL----DTANKTAAISLKELT 250 (349)
T ss_dssp HHHHH---HHHHHHHHHHHHCC---HHHH----HHHHHHHHHHHHHHE
T ss_pred HHHHH---HHHHHHHHHHhhCc---HHHH----HHHHHHHHHHHHHhc
Confidence 35555 34445556666665 3343 444555556666776
No 22
>1w6k_A Lanosterol synthase; cyclase, cholesterol, monotopic membrane protein, B-octyl-glucoside, isomerase, steroid biosynthesis; HET: BOG LAN; 2.1A {Homo sapiens} SCOP: a.102.4.2 a.102.4.2 PDB: 1w6j_A*
Probab=38.89 E-value=2.9e+02 Score=31.27 Aligned_cols=131 Identities=12% Similarity=0.054 Sum_probs=74.6
Q ss_pred cchHHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcCC------hHHHHHHHHHHHh
Q 007986 187 EETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGE------GEIVRNFLLHTLQ 260 (582)
Q Consensus 187 ~~~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~------pEiar~~L~~la~ 260 (582)
.+++.++++++.|++.+. ..+.|...-+. +=.++| |+..++.++...|. .+.++..+.+|..
T Consensus 353 ~~~~~~~~~l~~l~~~l~---~~~dG~~~q~~-------~gs~vw--dTalal~AL~~ag~~~~~~~~~~l~ka~~~L~~ 420 (732)
T 1w6k_A 353 PASTAFQEHVSRIPDYLW---MGLDGMKMQGT-------NGSQIW--DTAFAIQALLEAGGHHRPEFSSCLQKAHEFLRL 420 (732)
T ss_dssp TTSHHHHHHHHTSGGGEE---EETTEEEECSS-------SCCHHH--HHHHHHHHHHHTTGGGCGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhe---eCCCCceeCCC-------CCCchH--HHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHH
Confidence 567788888887777655 24677653321 114677 99999999876553 3467778888877
Q ss_pred hhhhhhhcc---cCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChh-HH
Q 007986 261 LQSWEKTVD---CYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYA-LQ 336 (582)
Q Consensus 261 lQs~~~tld---~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~-fl 336 (582)
.|..+..-+ .|+. .-|+.+ .|+.... .+..+|.|..-+.+|..+.+..++.. -.
T Consensus 421 ~Q~~~~~~d~~~~~r~---~~~GGW------------------~f~~~~~-~~pd~d~TA~vl~aL~~~~~~~~~~g~~~ 478 (732)
T 1w6k_A 421 SQVPDNPPDYQKYYRQ---MRKGGF------------------SFSTLDC-GWIVSDCTAEALKAVLLLQEKCPHVTEHI 478 (732)
T ss_dssp HSCCCCCTTGGGGTCC---CCTTCC------------------BSSCTTT-CCBCHHHHHHHHHHHHHHHHHCTTCCSCC
T ss_pred hcccccCCcccccccC---CCCCee------------------cCCCCCC-CCCccccHHHHHHHHHHHhcccccccchh
Confidence 665431000 1111 011211 0111111 25688999999999999887654210 01
Q ss_pred hhhhHHHHHHHHHHH
Q 007986 337 ERVDVQTGIKLIMNL 351 (582)
Q Consensus 337 ~~p~vq~~L~~IL~~ 351 (582)
.+..+++++++++..
T Consensus 479 ~~~~i~~av~wLls~ 493 (732)
T 1w6k_A 479 PRERLCDAVAVLLNM 493 (732)
T ss_dssp CHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHh
Confidence 113366777766543
No 23
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=36.95 E-value=3.9e+02 Score=28.03 Aligned_cols=40 Identities=23% Similarity=0.046 Sum_probs=29.4
Q ss_pred CCCCcHHHHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHhh
Q 007986 311 APVDSGLWWIILLRAYGKITGDYALQERVDVQTGIKLIMNLCL 353 (582)
Q Consensus 311 gsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~l 353 (582)
--||+.+ -|-+|..-.+.+||..+++. ..+..+.+++.+.
T Consensus 171 ~iID~~m-ni~~L~~A~~~~gd~~y~~~--A~~ha~~~l~~~~ 210 (397)
T 2zzr_A 171 LIIDCLL-NIQLLFFAYEQTGDEKYRQV--AVNHFYASANNVV 210 (397)
T ss_dssp EETTHHH-HTHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHTB
T ss_pred eeechHh-HHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHhCc
Confidence 4578888 88888888999999999875 4445555555554
No 24
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=31.93 E-value=4.7e+02 Score=27.43 Aligned_cols=136 Identities=13% Similarity=0.085 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcccchhHHHHHHHH----hcCChHHHHHHHHHHHhhhhhh
Q 007986 190 EIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVFIRDFVPSALAFL----LKGEGEIVRNFLLHTLQLQSWE 265 (582)
Q Consensus 190 ~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL----~~G~pEiar~~L~~la~lQs~~ 265 (582)
.-.+.+++.-+.++.+| ...+|.+.+-++. ..++-..+|. |.+..+.++. .+|+++..+...++...+- +
T Consensus 134 ~~~~~~~~aA~~L~~r~-~~~~g~iqsw~~~--~~~~~~~~iI-D~~mni~~L~~A~~~~gd~~y~~~A~~ha~~~l--~ 207 (397)
T 2zzr_A 134 KALEATIKAADKLMERY-QEKGGFIQAWGEL--GYKEHYRLII-DCLLNIQLLFFAYEQTGDEKYRQVAVNHFYASA--N 207 (397)
T ss_dssp HHHHHHHHHHHHHHTTE-ETTTTEECCSSST--TCGGGCEEET-THHHHTHHHHHHHHHHCCHHHHHHHHHHHHHHH--H
T ss_pred HHHHHHHHHHHHHHHHh-CcCCCEEEecccC--CCCCCCceee-chHhHHHHHHHHHHHhCCHHHHHHHHHHHHHHH--H
Confidence 34444455555556667 4457888775421 1223335554 8888776642 5788876665544332110 1
Q ss_pred hhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCcc--CccCCC-Cc-----HHHHHHHHHHHHHHhCChhHHh
Q 007986 266 KTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAI--GRVAPV-DS-----GLWWIILLRAYGKITGDYALQE 337 (582)
Q Consensus 266 ~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i--~~ygsV-DA-----tLWfIIaL~~Y~k~TGD~~fl~ 337 (582)
. .++ .+|-. .|. .+. .|..|+... ..-|-. |+ --|.|.++-+.+++|+|..+++
T Consensus 208 ~---~~r-~dgs~------~h~-~~~-------d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~ 269 (397)
T 2zzr_A 208 N---VVR-DDSSA------FHT-FYF-------DPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQII 269 (397)
T ss_dssp H---TBC-TTSCB------CSE-EEE-------CTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred h---CcC-CCCCe------EEE-EEe-------eCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 1 111 12322 231 111 233444321 112333 43 4899999999999999999988
Q ss_pred hhhHHHHHHHHHHH
Q 007986 338 RVDVQTGIKLIMNL 351 (582)
Q Consensus 338 ~p~vq~~L~~IL~~ 351 (582)
. .++..+.+++.
T Consensus 270 ~--A~~la~~~l~~ 281 (397)
T 2zzr_A 270 L--FKGMTNYFLNR 281 (397)
T ss_dssp H--HHHHHHHHHHT
T ss_pred H--HHHHHHHHHHh
Confidence 6 34444444443
No 25
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=24.39 E-value=1.5e+02 Score=29.69 Aligned_cols=95 Identities=11% Similarity=0.064 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCChhHHhhhhHHHHHHHHHHHh-hcCCCCCCCceeccCCCccccccccCCCcceehhHHHHHHHHHH
Q 007986 318 WWIILLRAYGKITGDYALQERVDVQTGIKLIMNLC-LADGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYTALRCS 396 (582)
Q Consensus 318 WfIIaL~~Y~k~TGD~~fl~~p~vq~~L~~IL~~~-l~~gfd~~p~Llv~Dg~~WmD~r~gr~G~pVEIQALwYnALr~a 396 (582)
++|.++.++++.|||..+++. ..+.++.+++.+ ...++-.. .+-+.+ +..| .+.++ .+...+
T Consensus 119 f~i~al~~~y~~tg~~~~l~~--A~~~~~~i~~~~~d~~g~~~~---------~~~~~~-~~~~--~~~~~---~~~~al 181 (388)
T 2gz6_A 119 FAAMAFSQYALASGEEWAKDV--AMQAYNNVLRRKDNPKGKYTK---------TYPGTR-PMKA--LAVPM---ILANLT 181 (388)
T ss_dssp HHHHHHHHHHHHHCCHHHHHH--HHHHHHHHHTC-----------------------CC-CCEE--THHHH---HHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHH--HHHHHHHHHHHhcCCCcccCc---------ccCCCC-CCCC--CCHHH---HHHHHH
Q ss_pred HHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHhhhcchhh
Q 007986 397 REMLTVSDGSGSNNLVRAINNRLSALSFHIREYYWVDMKK 436 (582)
Q Consensus 397 aeLa~~~g~~~~~~~a~~~~~ra~aLk~~f~~~FWld~~~ 436 (582)
.+|.+..++ .++.+++..+-+.+.+.||....+
T Consensus 182 l~l~~~t~d-------~~~~~~A~~~~~~~~~~~~~~~~g 214 (388)
T 2gz6_A 182 LEMEWLLPQ-------ETLENVLAATVQEVMGDFLDQEQG 214 (388)
T ss_dssp HHTGGGSCH-------HHHHHHHHHHHHHHHHTTEETTTT
T ss_pred HHHHHHcCC-------HHHHHHHHHHHHHHHHHHhccCCC
No 26
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=23.46 E-value=2.8e+02 Score=30.34 Aligned_cols=143 Identities=13% Similarity=0.019 Sum_probs=78.7
Q ss_pred cchHHHHHHHHHHHHHhhhcccccCeeEeccCCCCCCCCCCCCcc-cchhHHHHHHH-------H--hcCChHHHH---H
Q 007986 187 EETEIEKEAWRLLQEAVVTYCESPIGTVAANDPGDKQPLNYDQVF-IRDFVPSALAF-------L--LKGEGEIVR---N 253 (582)
Q Consensus 187 ~~~~~~~~A~~~Lr~~~v~~~~~p~GtlAA~~~~~~~a~nY~~vf-GRD~~IS~lgl-------L--~~G~pEiar---~ 253 (582)
.+..++++|.++=.+++--|++||-|.=-+..+-..... -..-| ++.+.+|..|. | .+|++.-.+ .
T Consensus 122 ~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~-~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r 200 (511)
T 1dl2_A 122 NKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQA-VKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVER 200 (511)
T ss_dssp CHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCE-ECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCC-CCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHH
Confidence 467899999999999999997677764322110000000 00012 34556666652 2 578876544 4
Q ss_pred HHHHHHhhhhhhhhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCCh
Q 007986 254 FLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDY 333 (582)
Q Consensus 254 ~L~~la~lQs~~~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~ 333 (582)
+...+...|.... ...|++|..+-+. .|+ -. .+...+| +..||- +=.++.+|... +|.
T Consensus 201 ~~~~l~~~~~~~~------~~~GL~p~~i~~~-------tg~-~~---~~~~~lG--a~~DS~--YEYLlK~~il~-~d~ 258 (511)
T 1dl2_A 201 VYEPLYKNNDLLN------TYDGLVPIYTFPD-------TGK-FG---ASTIRFG--SRGDSF--YEYLLKQYLLT-HET 258 (511)
T ss_dssp THHHHHHHHTHHH------HHTTCCBSEECTT-------TCC-BC---SCCBCSS--TTTHHH--HHHHHHHHHHH-CCH
T ss_pred HHHHHHhcccccC------CCCCCcceEEcCC-------CCC-cc---CCeeeec--CCCCcH--HHHHHHHHHhc-CCH
Confidence 4444443331101 1379999854211 121 00 0111222 556654 45666666654 888
Q ss_pred hHHhhhhHHHHHHHHHHHhhc
Q 007986 334 ALQERVDVQTGIKLIMNLCLA 354 (582)
Q Consensus 334 ~fl~~p~vq~~L~~IL~~~l~ 354 (582)
.+.+. +.++++.|.+.++.
T Consensus 259 ~y~~m--~~~a~~~i~~~L~~ 277 (511)
T 1dl2_A 259 LYYDL--YRKSMEGMKKHLLA 277 (511)
T ss_dssp HHHHH--HHHHHHHHHHHTEE
T ss_pred HHHHH--HHHHHHHHHHHhcc
Confidence 88776 88888888887764
No 27
>2sqc_A Squalene-hopene cyclase; isomerase, triterpene cyclase, monotopic membrane protein, QW-sequence, repeat; HET: C8E; 2.00A {Alicyclobacillus acidocaldarius} SCOP: a.102.4.2 a.102.4.2 PDB: 3sqc_A 1ump_A* 1h35_A* 1h36_A* 1h37_A* 1h39_A* 1h3a_A* 1h3b_A* 1h3c_A* 1o6h_A* 1o6q_A* 1gsz_A* 1o79_A* 1sqc_A* 1o6r_A*
Probab=21.17 E-value=1.3e+02 Score=33.15 Aligned_cols=126 Identities=15% Similarity=0.078 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHHHHhhhcccccC-eeEeccCCCCCCCCCCCCcccchhHHHHHHHHhcCCh---HHHHHHHHHHHhhhh
Q 007986 188 ETEIEKEAWRLLQEAVVTYCESPI-GTVAANDPGDKQPLNYDQVFIRDFVPSALAFLLKGEG---EIVRNFLLHTLQLQS 263 (582)
Q Consensus 188 ~~~~~~~A~~~Lr~~~v~~~~~p~-GtlAA~~~~~~~a~nY~~vfGRD~~IS~lglL~~G~p---Eiar~~L~~la~lQs 263 (582)
+++.++++++.+++.+.. .+. |......++ ++| |+..++.++...|.+ +.++..++.|...|-
T Consensus 279 ~~~~~~~~~~~~~~~~~~---~~dGg~~~~~~~s--------~vw--dta~~l~AL~~~G~~~~~~~~~ka~~~L~~~q~ 345 (631)
T 2sqc_A 279 QHPAFIKGWEGLELYGVE---LDYGGWMFQASIS--------PVW--DTGLAVLALRAAGLPADHDRLVKAGEWLLDRQI 345 (631)
T ss_dssp TSHHHHHHHHGGGGGEEE---CTTSCEEECSSCC--------HHH--HHHHHHHHHHHTTCCTTCHHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHhceEE---cCCCceeeCCCCC--------hHH--HHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhcC
Q ss_pred hh-hhcccCCCCCCCCCCceeeccccCCCccccccccCCCCCCccCccCCCCcHHHHHHHHHHHHHHhCChhHHhhhhHH
Q 007986 264 WE-KTVDCYSPGQGLMPASFKVRNVPLESNKFEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKITGDYALQERVDVQ 342 (582)
Q Consensus 264 ~~-~tld~~~~~~GliP~sfKI~h~~~r~~~ge~~l~pd~Ge~~i~~ygsVDAtLWfIIaL~~Y~k~TGD~~fl~~p~vq 342 (582)
.. ......+ ...-|+.+ .|+....+ +..+|.|-+-+.+|.+... ..+....+. ++
T Consensus 346 ~~~g~~~~~~--~~~s~GgW------------------~f~~~~~~-~p~v~dTA~al~AL~~~~~-~~~~~~~~~--l~ 401 (631)
T 2sqc_A 346 TVPGDWAVKR--PNLKPGGF------------------AFQFDNVY-YPDVCDTAVVVWALNTLRL-PDERRRRDA--MT 401 (631)
T ss_dssp CSCCGGGGTC--TTSCCCCB------------------CSSSSCTT-CCBHHHHHHHHHHHTTCCC-SCHHHHHHH--HH
T ss_pred CCCCChhhhc--CCCCCCCC------------------ccccCCCC-CCchHHHHHHHHHHHHcCC-CccchhHHH--HH
Q ss_pred HHHHHHHH
Q 007986 343 TGIKLIMN 350 (582)
Q Consensus 343 ~~L~~IL~ 350 (582)
++++|+++
T Consensus 402 ~a~~wLls 409 (631)
T 2sqc_A 402 KGFRWIVG 409 (631)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
No 28
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=20.63 E-value=92 Score=24.20 Aligned_cols=27 Identities=22% Similarity=0.290 Sum_probs=23.0
Q ss_pred ccchhHHHHHHHHhcCChHHHHHHHHHH
Q 007986 231 FIRDFVPSALAFLLKGEGEIVRNFLLHT 258 (582)
Q Consensus 231 fGRD~~IS~lglL~~G~pEiar~~L~~l 258 (582)
|.|+.+|-+|. .+.|+.+.|.++|+.+
T Consensus 23 Fsr~~ai~AL~-~a~nnve~AaniLlef 49 (52)
T 2ooa_A 23 YAFEEVKRALE-IAQNNVEVARSILREF 49 (52)
T ss_dssp CCHHHHHHHHH-HTTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHHH-HhCCCHHHHHHHHHHh
Confidence 66999999988 4578999999999855
Done!