Query 007987
Match_columns 582
No_of_seqs 532 out of 1964
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 15:23:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007987.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007987hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fr7_A Putative ketol-acid red 100.0 5E-154 2E-158 1243.6 38.1 514 68-581 11-525 (525)
2 3ulk_A Ketol-acid reductoisome 100.0 4.3E-94 1.5E-98 765.7 26.1 440 71-559 2-478 (491)
3 1np3_A Ketol-acid reductoisome 100.0 1.5E-44 5E-49 374.6 22.9 309 106-442 12-329 (338)
4 3tri_A Pyrroline-5-carboxylate 100.0 3.9E-29 1.3E-33 252.6 18.9 220 112-365 4-235 (280)
5 3gt0_A Pyrroline-5-carboxylate 99.9 6.8E-27 2.3E-31 230.3 16.7 220 112-365 3-233 (247)
6 3ulk_A Ketol-acid reductoisome 99.9 9.1E-25 3.1E-29 233.6 2.6 128 303-441 355-485 (491)
7 2izz_A Pyrroline-5-carboxylate 99.9 1.7E-21 5.7E-26 199.8 21.3 217 112-363 23-255 (322)
8 2rcy_A Pyrroline carboxylate r 99.8 1.1E-19 3.7E-24 178.7 20.6 201 112-353 5-213 (262)
9 2ahr_A Putative pyrroline carb 99.8 1.6E-19 5.3E-24 177.9 18.9 215 111-363 3-224 (259)
10 1yqg_A Pyrroline-5-carboxylate 99.8 2E-19 6.7E-24 177.0 19.4 214 112-363 1-223 (263)
11 3c24_A Putative oxidoreductase 99.8 2.1E-18 7.2E-23 172.9 18.5 209 111-349 11-239 (286)
12 3b1f_A Putative prephenate deh 99.8 2.5E-18 8.6E-23 171.9 13.6 215 111-349 6-231 (290)
13 3ggo_A Prephenate dehydrogenas 99.7 2.5E-18 8.5E-23 176.8 11.4 207 112-340 34-247 (314)
14 2g5c_A Prephenate dehydrogenas 99.7 2.3E-18 7.8E-23 171.5 10.5 210 111-349 1-223 (281)
15 2pv7_A T-protein [includes: ch 99.7 1.5E-16 5.3E-21 161.3 18.1 188 112-343 22-211 (298)
16 3ktd_A Prephenate dehydrogenas 99.7 7.2E-17 2.5E-21 168.5 15.0 187 112-322 9-211 (341)
17 2f1k_A Prephenate dehydrogenas 99.7 3.3E-16 1.1E-20 155.5 17.1 222 112-362 1-231 (279)
18 3d1l_A Putative NADP oxidoredu 99.6 2.4E-14 8.2E-19 141.4 16.9 205 108-343 8-216 (266)
19 2dpo_A L-gulonate 3-dehydrogen 99.6 1.1E-13 3.9E-18 142.9 19.1 193 111-336 6-223 (319)
20 4e12_A Diketoreductase; oxidor 99.5 1.7E-13 5.9E-18 137.8 18.1 189 111-335 4-220 (283)
21 2i76_A Hypothetical protein; N 99.5 6.6E-15 2.3E-19 147.4 7.6 211 112-364 3-217 (276)
22 3dtt_A NADP oxidoreductase; st 99.5 1.2E-13 4.1E-18 136.2 13.7 161 104-287 13-206 (245)
23 4huj_A Uncharacterized protein 99.5 1.4E-13 4.9E-18 133.5 13.4 154 111-287 23-192 (220)
24 1f0y_A HCDH, L-3-hydroxyacyl-C 99.5 1E-12 3.4E-17 132.9 19.9 192 111-335 15-234 (302)
25 2h78_A Hibadh, 3-hydroxyisobut 99.5 1.1E-13 3.7E-18 139.3 11.8 194 111-336 3-207 (302)
26 3qsg_A NAD-binding phosphogluc 99.4 6.5E-13 2.2E-17 135.7 14.7 95 111-215 24-120 (312)
27 3pef_A 6-phosphogluconate dehy 99.4 7.4E-13 2.5E-17 132.7 14.1 195 112-336 2-205 (287)
28 3obb_A Probable 3-hydroxyisobu 99.4 1E-12 3.5E-17 134.5 15.1 150 111-287 3-159 (300)
29 3k6j_A Protein F01G10.3, confi 99.4 6.9E-12 2.4E-16 135.9 21.4 194 110-336 53-265 (460)
30 2ew2_A 2-dehydropantoate 2-red 99.4 2.3E-12 7.9E-17 128.4 16.2 153 111-287 3-177 (316)
31 3pdu_A 3-hydroxyisobutyrate de 99.4 1E-12 3.6E-17 131.6 13.4 196 111-338 1-207 (287)
32 3doj_A AT3G25530, dehydrogenas 99.4 1.5E-12 5.3E-17 132.5 14.6 194 111-336 21-225 (310)
33 1zej_A HBD-9, 3-hydroxyacyl-CO 99.4 9.3E-12 3.2E-16 127.5 20.1 204 112-360 13-232 (293)
34 3mog_A Probable 3-hydroxybutyr 99.4 7.6E-12 2.6E-16 136.1 19.0 214 111-359 5-244 (483)
35 2uyy_A N-PAC protein; long-cha 99.4 2.5E-12 8.6E-17 130.2 13.6 197 112-340 31-238 (316)
36 3dfu_A Uncharacterized protein 99.4 1.7E-12 5.8E-17 129.3 12.1 152 112-323 7-160 (232)
37 3g0o_A 3-hydroxyisobutyrate de 99.4 2.9E-12 9.9E-17 129.7 13.6 193 112-336 8-213 (303)
38 3qha_A Putative oxidoreductase 99.3 7.9E-12 2.7E-16 126.4 14.4 187 112-333 16-212 (296)
39 2gf2_A Hibadh, 3-hydroxyisobut 99.3 1.9E-12 6.6E-17 129.2 9.4 194 112-336 1-204 (296)
40 4gbj_A 6-phosphogluconate dehy 99.3 4.5E-12 1.5E-16 129.3 12.1 151 112-287 6-159 (297)
41 1vpd_A Tartronate semialdehyde 99.3 7.4E-12 2.5E-16 125.1 13.4 196 112-339 6-212 (299)
42 1jay_A Coenzyme F420H2:NADP+ o 99.3 5.1E-12 1.7E-16 120.2 11.4 176 112-321 1-201 (212)
43 2p4q_A 6-phosphogluconate dehy 99.3 9.6E-12 3.3E-16 135.7 14.8 147 112-286 11-169 (497)
44 2zyd_A 6-phosphogluconate dehy 99.3 1.3E-11 4.6E-16 133.9 15.7 149 112-287 16-174 (480)
45 1txg_A Glycerol-3-phosphate de 99.3 1.7E-11 5.6E-16 124.1 14.9 154 112-286 1-174 (335)
46 3l6d_A Putative oxidoreductase 99.3 5E-11 1.7E-15 121.3 18.4 198 112-340 10-214 (306)
47 1z82_A Glycerol-3-phosphate de 99.3 9.9E-12 3.4E-16 127.3 13.2 143 112-286 15-173 (335)
48 1evy_A Glycerol-3-phosphate de 99.3 2.1E-11 7.1E-16 126.0 15.0 149 112-284 16-188 (366)
49 2cvz_A Dehydrogenase, 3-hydrox 99.3 1.1E-11 3.8E-16 122.8 11.7 190 111-338 1-201 (289)
50 3k96_A Glycerol-3-phosphate de 99.3 7.4E-11 2.5E-15 123.5 18.1 171 112-314 30-217 (356)
51 4dll_A 2-hydroxy-3-oxopropiona 99.3 2.4E-11 8.3E-16 124.3 14.1 191 112-335 32-232 (320)
52 1yb4_A Tartronic semialdehyde 99.3 2.7E-11 9.1E-16 120.7 13.9 194 111-337 3-207 (295)
53 1x0v_A GPD-C, GPDH-C, glycerol 99.3 1.1E-10 3.7E-15 119.6 18.8 148 112-286 9-191 (354)
54 4ezb_A Uncharacterized conserv 99.3 2.9E-11 9.8E-16 124.0 14.5 186 112-331 25-224 (317)
55 1yj8_A Glycerol-3-phosphate de 99.3 1.3E-10 4.4E-15 121.0 19.1 149 111-286 21-208 (375)
56 1i36_A Conserved hypothetical 99.3 5.7E-11 2E-15 116.8 15.2 183 112-339 1-195 (264)
57 3cky_A 2-hydroxymethyl glutara 99.3 7.4E-11 2.5E-15 118.0 15.9 194 112-338 5-210 (301)
58 4e21_A 6-phosphogluconate dehy 99.3 9.8E-11 3.4E-15 122.8 17.1 153 105-286 17-175 (358)
59 2iz1_A 6-phosphogluconate dehy 99.2 1.6E-10 5.5E-15 124.9 19.0 149 112-287 6-164 (474)
60 1ygy_A PGDH, D-3-phosphoglycer 99.2 8.4E-12 2.9E-16 136.9 7.4 167 94-287 125-307 (529)
61 1wdk_A Fatty oxidation complex 99.2 2.3E-10 7.9E-15 129.8 19.2 148 111-287 314-488 (715)
62 2pgd_A 6-phosphogluconate dehy 99.2 4.6E-11 1.6E-15 129.4 12.8 148 112-287 3-162 (482)
63 2yjz_A Metalloreductase steap4 98.8 1.2E-12 4E-17 126.5 0.0 151 108-287 17-176 (201)
64 2ekl_A D-3-phosphoglycerate de 99.2 4.4E-11 1.5E-15 123.1 10.5 159 94-277 127-295 (313)
65 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.2 2.9E-10 9.9E-15 123.2 16.6 149 112-287 2-164 (478)
66 4gwg_A 6-phosphogluconate dehy 99.2 1.7E-10 5.7E-15 125.8 14.7 152 112-287 5-164 (484)
67 1wwk_A Phosphoglycerate dehydr 99.2 8E-11 2.7E-15 120.9 11.4 158 94-277 125-293 (307)
68 1zcj_A Peroxisomal bifunctiona 99.2 8.6E-10 3E-14 119.0 20.0 191 111-336 37-248 (463)
69 2qyt_A 2-dehydropantoate 2-red 99.2 3.7E-11 1.3E-15 120.4 8.4 165 112-287 9-187 (317)
70 1ks9_A KPA reductase;, 2-dehyd 99.2 1.6E-10 5.4E-15 114.0 12.0 149 112-287 1-162 (291)
71 1gdh_A D-glycerate dehydrogena 99.1 7.2E-11 2.5E-15 121.9 9.1 148 105-278 141-299 (320)
72 2g76_A 3-PGDH, D-3-phosphoglyc 99.1 1.5E-10 5.1E-15 120.6 10.9 156 94-276 148-314 (335)
73 2raf_A Putative dinucleotide-b 99.1 8.6E-11 2.9E-15 113.4 8.4 137 107-286 16-169 (209)
74 2wtb_A MFP2, fatty acid multif 99.1 2.5E-09 8.4E-14 121.6 19.7 191 111-337 312-526 (725)
75 3hn2_A 2-dehydropantoate 2-red 99.1 1.4E-09 4.6E-14 110.7 15.1 163 112-306 3-183 (312)
76 2vns_A Metalloreductase steap3 99.1 3.2E-10 1.1E-14 109.8 9.7 149 112-287 29-188 (215)
77 1mv8_A GMD, GDP-mannose 6-dehy 99.1 3.4E-09 1.2E-13 113.1 17.6 195 112-335 1-243 (436)
78 3gg9_A D-3-phosphoglycerate de 99.0 5.3E-10 1.8E-14 117.2 11.1 145 105-274 155-309 (352)
79 4hy3_A Phosphoglycerate oxidor 99.0 9E-10 3.1E-14 116.2 11.7 145 105-276 171-325 (365)
80 3gvx_A Glycerate dehydrogenase 99.0 2.9E-10 1E-14 116.3 7.2 151 94-277 107-268 (290)
81 4e5n_A Thermostable phosphite 99.0 8.2E-10 2.8E-14 114.7 9.8 148 105-277 140-304 (330)
82 1qp8_A Formate dehydrogenase; 99.0 9.4E-10 3.2E-14 112.9 10.0 152 95-275 109-272 (303)
83 3gg2_A Sugar dehydrogenase, UD 99.0 5.8E-09 2E-13 112.4 16.2 201 112-336 3-246 (450)
84 3ba1_A HPPR, hydroxyphenylpyru 99.0 8.4E-10 2.9E-14 114.8 9.2 152 94-275 146-309 (333)
85 4dgs_A Dehydrogenase; structur 99.0 1.1E-09 3.7E-14 114.5 10.0 154 94-277 152-318 (340)
86 2cuk_A Glycerate dehydrogenase 99.0 1.2E-09 3.9E-14 112.5 9.5 140 105-276 139-288 (311)
87 3jtm_A Formate dehydrogenase, 99.0 8.1E-10 2.8E-14 115.8 8.0 159 94-276 145-316 (351)
88 4g2n_A D-isomer specific 2-hyd 99.0 8.8E-10 3E-14 115.4 8.1 145 105-276 168-322 (345)
89 2o3j_A UDP-glucose 6-dehydroge 98.9 5.9E-09 2E-13 113.0 14.8 203 111-335 9-260 (481)
90 2pi1_A D-lactate dehydrogenase 98.9 9.7E-10 3.3E-14 114.4 7.9 103 95-212 124-230 (334)
91 3i83_A 2-dehydropantoate 2-red 98.9 3.1E-09 1.1E-13 108.4 10.9 164 112-306 3-185 (320)
92 2dbq_A Glyoxylate reductase; D 98.9 1.1E-09 3.7E-14 113.5 7.5 143 105-274 145-297 (334)
93 3evt_A Phosphoglycerate dehydr 98.9 1.4E-09 4.7E-14 112.9 7.7 147 95-267 122-277 (324)
94 3hwr_A 2-dehydropantoate 2-red 98.9 9.4E-09 3.2E-13 105.0 13.5 101 112-221 20-131 (318)
95 1mx3_A CTBP1, C-terminal bindi 98.9 1.4E-09 4.9E-14 113.7 7.5 144 106-274 164-318 (347)
96 2nac_A NAD-dependent formate d 98.9 2.2E-09 7.4E-14 114.3 8.7 158 94-275 172-342 (393)
97 2q3e_A UDP-glucose 6-dehydroge 98.9 3.7E-08 1.3E-12 106.1 18.4 204 111-335 5-254 (467)
98 2j6i_A Formate dehydrogenase; 98.9 1.5E-09 5.3E-14 114.0 7.4 163 94-275 145-321 (364)
99 4a7p_A UDP-glucose dehydrogena 98.9 5.3E-08 1.8E-12 105.1 19.1 201 110-336 7-250 (446)
100 3ghy_A Ketopantoate reductase 98.9 8E-09 2.7E-13 106.0 12.0 94 112-214 4-107 (335)
101 2gcg_A Glyoxylate reductase/hy 98.9 3.3E-09 1.1E-13 109.6 8.5 95 105-212 150-246 (330)
102 2d0i_A Dehydrogenase; structur 98.9 1.7E-09 5.7E-14 112.3 6.2 92 106-212 142-235 (333)
103 1sc6_A PGDH, D-3-phosphoglycer 98.9 3.8E-09 1.3E-13 112.7 9.1 157 94-275 128-296 (404)
104 2w2k_A D-mandelate dehydrogena 98.9 3.4E-09 1.2E-13 110.5 8.5 97 105-213 158-257 (348)
105 3ado_A Lambda-crystallin; L-gu 98.8 7.8E-08 2.7E-12 99.7 18.2 152 112-287 7-182 (319)
106 3pid_A UDP-glucose 6-dehydroge 98.8 5.2E-08 1.8E-12 104.9 17.0 196 112-335 37-266 (432)
107 3pp8_A Glyoxylate/hydroxypyruv 98.8 1.4E-09 4.8E-14 112.4 3.4 146 95-267 125-279 (315)
108 1bg6_A N-(1-D-carboxylethyl)-L 98.8 1.6E-08 5.4E-13 103.0 11.2 96 112-214 5-111 (359)
109 3hg7_A D-isomer specific 2-hyd 98.8 1.6E-09 5.3E-14 112.6 3.4 147 94-267 125-280 (324)
110 2y0c_A BCEC, UDP-glucose dehyd 98.8 6.9E-08 2.4E-12 104.7 16.3 196 110-334 7-254 (478)
111 1j4a_A D-LDH, D-lactate dehydr 98.8 1.2E-08 3.9E-13 106.0 8.3 147 105-275 141-307 (333)
112 2yq5_A D-isomer specific 2-hyd 98.7 1.1E-08 3.7E-13 107.1 7.4 148 104-276 142-309 (343)
113 3k5p_A D-3-phosphoglycerate de 98.7 1.6E-08 5.5E-13 108.4 8.2 158 94-276 139-308 (416)
114 1xdw_A NAD+-dependent (R)-2-hy 98.7 1.3E-08 4.4E-13 105.5 7.0 116 105-237 141-265 (331)
115 1dxy_A D-2-hydroxyisocaproate 98.7 1.3E-08 4.4E-13 105.7 6.5 92 105-212 140-233 (333)
116 1dlj_A UDP-glucose dehydrogena 98.7 3.7E-07 1.3E-11 96.6 17.7 92 112-212 1-117 (402)
117 3ego_A Probable 2-dehydropanto 98.7 2.1E-08 7.1E-13 102.1 7.2 119 112-243 3-134 (307)
118 3g79_A NDP-N-acetyl-D-galactos 98.6 1E-06 3.5E-11 95.9 19.9 202 111-335 18-268 (478)
119 3c7a_A Octopine dehydrogenase; 98.6 4.5E-08 1.5E-12 102.5 7.9 94 112-211 3-115 (404)
120 1y81_A Conserved hypothetical 98.6 7.2E-08 2.5E-12 88.2 8.2 113 108-243 12-128 (138)
121 3ojo_A CAP5O; rossmann fold, c 98.6 1.5E-06 5.2E-11 93.5 19.0 202 109-335 10-248 (431)
122 2o4c_A Erythronate-4-phosphate 98.6 2.6E-08 8.7E-13 105.7 3.9 138 106-274 112-263 (380)
123 2hk9_A Shikimate dehydrogenase 98.5 3.6E-08 1.2E-12 98.9 4.4 96 107-213 126-222 (275)
124 3oet_A Erythronate-4-phosphate 98.5 5.2E-08 1.8E-12 103.4 5.7 150 106-286 115-283 (381)
125 3g17_A Similar to 2-dehydropan 98.5 3.6E-08 1.2E-12 99.4 3.5 97 112-216 3-101 (294)
126 2duw_A Putative COA-binding pr 98.5 1.9E-07 6.4E-12 85.9 7.2 111 112-243 14-129 (145)
127 3d4o_A Dipicolinate synthase s 98.5 2.4E-07 8.3E-12 93.6 8.7 94 106-212 151-244 (293)
128 1lss_A TRK system potassium up 98.5 1.1E-06 3.8E-11 76.7 11.4 96 112-214 5-105 (140)
129 2rir_A Dipicolinate synthase, 98.5 3.3E-07 1.1E-11 92.9 8.9 94 106-212 153-246 (300)
130 4fgw_A Glycerol-3-phosphate de 98.5 1.4E-06 4.9E-11 92.7 14.0 98 112-215 35-155 (391)
131 2b0j_A 5,10-methenyltetrahydro 98.4 1E-05 3.4E-10 82.9 18.9 174 159-363 126-311 (358)
132 3kb6_A D-lactate dehydrogenase 98.4 3.1E-07 1.1E-11 95.5 7.8 117 105-237 136-261 (334)
133 3oj0_A Glutr, glutamyl-tRNA re 98.4 1.2E-07 4E-12 85.4 3.5 90 110-212 21-110 (144)
134 2i99_A MU-crystallin homolog; 98.4 3.2E-07 1.1E-11 93.9 7.0 91 112-215 136-229 (312)
135 3zwc_A Peroxisomal bifunctiona 98.4 8.9E-06 3.1E-10 92.9 19.5 191 109-335 314-526 (742)
136 1v8b_A Adenosylhomocysteinase; 98.4 2.6E-07 9E-12 100.6 6.5 94 106-215 253-347 (479)
137 3h9u_A Adenosylhomocysteinase; 98.4 4E-07 1.4E-11 98.1 7.6 92 106-213 207-299 (436)
138 3d64_A Adenosylhomocysteinase; 98.4 2.6E-07 8.7E-12 101.1 5.7 93 106-214 273-366 (494)
139 3n58_A Adenosylhomocysteinase; 98.3 1.2E-06 4.1E-11 94.8 9.7 94 106-215 243-337 (464)
140 2d5c_A AROE, shikimate 5-dehyd 98.3 3.3E-07 1.1E-11 90.9 4.9 89 108-212 115-206 (263)
141 3fr7_A Putative ketol-acid red 98.3 5.7E-07 1.9E-11 98.3 6.7 115 450-564 253-386 (525)
142 3p2y_A Alanine dehydrogenase/p 98.2 1.5E-06 5.2E-11 92.2 7.2 97 108-212 182-302 (381)
143 2fp4_A Succinyl-COA ligase [GD 98.2 2.1E-06 7.2E-11 88.3 8.0 119 112-245 14-137 (305)
144 1hyh_A L-hicdh, L-2-hydroxyiso 98.2 4E-06 1.4E-10 85.2 9.5 94 111-215 1-126 (309)
145 3gvp_A Adenosylhomocysteinase 98.2 1.3E-06 4.4E-11 94.1 6.1 92 106-213 216-308 (435)
146 3ce6_A Adenosylhomocysteinase; 98.2 3.2E-06 1.1E-10 92.4 8.9 92 107-214 271-363 (494)
147 2dc1_A L-aspartate dehydrogena 98.1 4.2E-06 1.4E-10 81.6 8.2 79 112-212 1-81 (236)
148 2nu8_A Succinyl-COA ligase [AD 98.1 4.2E-06 1.4E-10 85.2 8.2 117 112-243 8-127 (288)
149 2d59_A Hypothetical protein PH 98.1 1.2E-05 4E-10 73.7 10.1 120 106-248 17-141 (144)
150 1oi7_A Succinyl-COA synthetase 98.1 4E-06 1.4E-10 85.4 7.7 118 112-244 8-128 (288)
151 3euw_A MYO-inositol dehydrogen 98.1 7.8E-06 2.7E-10 83.6 9.2 79 112-199 5-86 (344)
152 1x7d_A Ornithine cyclodeaminas 98.1 2.8E-06 9.4E-11 88.9 5.5 95 112-215 130-229 (350)
153 3uuw_A Putative oxidoreductase 98.0 7.1E-06 2.4E-10 82.6 7.7 86 112-209 7-94 (308)
154 3llv_A Exopolyphosphatase-rela 98.0 2.7E-05 9.3E-10 69.1 10.6 95 112-213 7-105 (141)
155 4hkt_A Inositol 2-dehydrogenas 98.0 1E-05 3.5E-10 82.2 8.9 84 112-208 4-90 (331)
156 3q2i_A Dehydrogenase; rossmann 98.0 1.1E-05 3.7E-10 83.0 9.0 87 112-209 14-103 (354)
157 2g1u_A Hypothetical protein TM 98.0 2.1E-05 7.3E-10 71.4 9.9 102 104-213 13-120 (155)
158 2ho3_A Oxidoreductase, GFO/IDH 98.0 1.4E-05 4.8E-10 81.1 9.5 87 111-208 1-89 (325)
159 1iuk_A Hypothetical protein TT 98.0 1.6E-05 5.5E-10 72.6 8.5 117 112-248 14-134 (140)
160 3e9m_A Oxidoreductase, GFO/IDH 98.0 1.4E-05 4.8E-10 81.6 8.8 79 112-198 6-87 (330)
161 3fwz_A Inner membrane protein 98.0 3.2E-05 1.1E-09 69.3 10.1 94 112-212 8-106 (140)
162 3mz0_A Inositol 2-dehydrogenas 98.0 1.5E-05 5.1E-10 81.6 8.6 86 112-209 3-94 (344)
163 2glx_A 1,5-anhydro-D-fructose 98.0 2.5E-05 8.7E-10 79.0 10.1 86 112-209 1-90 (332)
164 3ezy_A Dehydrogenase; structur 98.0 1.1E-05 3.9E-10 82.5 7.5 87 112-209 3-92 (344)
165 3hdj_A Probable ornithine cycl 98.0 1.1E-05 3.7E-10 83.2 7.3 90 112-215 122-216 (313)
166 3u62_A Shikimate dehydrogenase 97.9 2.5E-07 8.6E-12 92.7 -5.1 116 108-243 107-226 (253)
167 4dio_A NAD(P) transhydrogenase 97.9 1.1E-05 3.6E-10 86.4 6.7 97 108-212 188-312 (405)
168 3db2_A Putative NADPH-dependen 97.9 1.6E-05 5.6E-10 81.6 7.7 86 112-209 6-94 (354)
169 1a5z_A L-lactate dehydrogenase 97.9 2.3E-05 7.8E-10 80.4 8.7 93 112-215 1-120 (319)
170 3e18_A Oxidoreductase; dehydro 97.9 4.4E-05 1.5E-09 79.0 10.7 86 112-209 6-93 (359)
171 2hmt_A YUAA protein; RCK, KTN, 97.9 3.7E-05 1.3E-09 67.2 8.4 99 108-214 4-107 (144)
172 1tlt_A Putative oxidoreductase 97.9 5.4E-05 1.8E-09 76.6 10.8 86 112-209 6-93 (319)
173 3c85_A Putative glutathione-re 97.9 7.6E-05 2.6E-09 69.2 10.8 93 106-205 35-132 (183)
174 3cea_A MYO-inositol 2-dehydrog 97.9 4.2E-05 1.4E-09 77.9 9.6 86 112-209 9-99 (346)
175 3ic5_A Putative saccharopine d 97.8 0.0001 3.6E-09 62.2 10.2 92 112-213 6-101 (118)
176 3ec7_A Putative dehydrogenase; 97.8 5E-05 1.7E-09 78.5 9.5 86 112-209 24-115 (357)
177 3vtf_A UDP-glucose 6-dehydroge 97.8 0.0005 1.7E-08 74.3 17.4 190 111-332 21-258 (444)
178 3rc1_A Sugar 3-ketoreductase; 97.8 3.9E-05 1.3E-09 79.1 8.2 85 112-208 28-116 (350)
179 3l4b_C TRKA K+ channel protien 97.8 8.1E-05 2.8E-09 71.2 9.9 95 112-212 1-100 (218)
180 3evn_A Oxidoreductase, GFO/IDH 97.8 3.8E-05 1.3E-09 78.2 7.9 87 112-209 6-95 (329)
181 2vhw_A Alanine dehydrogenase; 97.8 2.6E-05 8.9E-10 81.9 6.5 98 107-212 165-268 (377)
182 3qy9_A DHPR, dihydrodipicolina 97.7 9.4E-05 3.2E-09 73.9 9.8 151 111-286 3-162 (243)
183 1omo_A Alanine dehydrogenase; 97.7 2.4E-05 8.2E-10 80.6 5.7 92 112-215 126-220 (322)
184 1x13_A NAD(P) transhydrogenase 97.7 3.5E-05 1.2E-09 81.8 7.1 98 107-212 169-292 (401)
185 1xea_A Oxidoreductase, GFO/IDH 97.7 5E-05 1.7E-09 77.0 7.9 85 112-207 3-89 (323)
186 2ewd_A Lactate dehydrogenase,; 97.7 8.8E-05 3E-09 75.6 9.7 93 112-214 5-124 (317)
187 1lld_A L-lactate dehydrogenase 97.7 5.8E-05 2E-09 76.2 8.0 98 112-216 8-129 (319)
188 4had_A Probable oxidoreductase 97.7 6.6E-05 2.3E-09 76.6 8.5 91 108-209 20-114 (350)
189 1ydw_A AX110P-like protein; st 97.7 0.00013 4.3E-09 75.3 9.9 90 112-209 7-99 (362)
190 1l7d_A Nicotinamide nucleotide 97.7 7.3E-05 2.5E-09 78.5 8.1 98 107-212 169-294 (384)
191 1gpj_A Glutamyl-tRNA reductase 97.7 8.9E-05 3E-09 78.4 8.7 74 108-190 165-239 (404)
192 3ohs_X Trans-1,2-dihydrobenzen 97.6 6.9E-05 2.4E-09 76.3 7.4 89 112-209 3-94 (334)
193 3c1a_A Putative oxidoreductase 97.6 3.9E-05 1.3E-09 77.6 5.1 84 112-208 11-96 (315)
194 3ond_A Adenosylhomocysteinase; 97.6 8.8E-05 3E-09 81.0 8.1 92 107-214 262-354 (488)
195 3don_A Shikimate dehydrogenase 97.6 9.3E-06 3.2E-10 82.5 0.5 94 107-211 114-209 (277)
196 1f06_A MESO-diaminopimelate D- 97.6 6.3E-05 2.2E-09 77.1 5.9 84 112-211 4-88 (320)
197 1id1_A Putative potassium chan 97.6 0.00043 1.5E-08 62.5 10.8 97 112-214 4-108 (153)
198 2v6b_A L-LDH, L-lactate dehydr 97.6 0.00016 5.4E-09 73.7 8.6 93 112-215 1-120 (304)
199 2p2s_A Putative oxidoreductase 97.5 0.00049 1.7E-08 70.0 12.1 84 112-208 5-93 (336)
200 3moi_A Probable dehydrogenase; 97.5 0.0001 3.5E-09 76.9 7.1 86 112-209 3-92 (387)
201 3bio_A Oxidoreductase, GFO/IDH 97.5 0.00023 7.9E-09 72.4 9.3 86 112-211 10-95 (304)
202 3dty_A Oxidoreductase, GFO/IDH 97.5 0.00022 7.4E-09 74.7 9.1 89 112-209 13-113 (398)
203 2z2v_A Hypothetical protein PH 97.5 5.8E-05 2E-09 79.1 4.6 92 112-213 17-109 (365)
204 4fb5_A Probable oxidoreductase 97.5 0.00019 6.5E-09 73.3 8.3 98 106-209 18-122 (393)
205 2egg_A AROE, shikimate 5-dehyd 97.5 0.00012 4E-09 74.6 6.4 76 107-191 138-217 (297)
206 1guz_A Malate dehydrogenase; o 97.5 0.00054 1.9E-08 69.9 11.3 70 112-188 1-79 (310)
207 2eez_A Alanine dehydrogenase; 97.5 0.00016 5.4E-09 75.5 7.2 99 106-212 162-266 (369)
208 2hjr_A Malate dehydrogenase; m 97.4 0.00058 2E-08 70.4 11.2 88 112-211 15-130 (328)
209 3o8q_A Shikimate 5-dehydrogena 97.4 3.9E-05 1.3E-09 78.0 2.3 73 107-191 123-200 (281)
210 2yv1_A Succinyl-COA ligase [AD 97.4 0.00018 6E-09 73.5 6.7 117 112-243 14-133 (294)
211 3v5n_A Oxidoreductase; structu 97.4 0.00035 1.2E-08 73.9 8.7 88 112-209 38-138 (417)
212 1pzg_A LDH, lactate dehydrogen 97.4 0.00073 2.5E-08 69.8 11.0 69 112-186 10-86 (331)
213 4h3v_A Oxidoreductase domain p 97.4 0.00037 1.3E-08 71.1 8.7 91 113-209 8-103 (390)
214 1h6d_A Precursor form of gluco 97.4 0.00034 1.2E-08 74.5 8.6 89 112-208 84-177 (433)
215 2yv2_A Succinyl-COA synthetase 97.4 0.00028 9.6E-09 72.1 7.5 117 112-243 14-134 (297)
216 3pwz_A Shikimate dehydrogenase 97.3 0.00014 4.9E-09 73.5 4.7 92 107-211 117-214 (272)
217 2aef_A Calcium-gated potassium 97.3 0.00057 2E-08 65.8 8.8 93 112-213 10-107 (234)
218 3i23_A Oxidoreductase, GFO/IDH 97.3 0.0007 2.4E-08 69.5 9.8 85 112-209 3-93 (349)
219 1leh_A Leucine dehydrogenase; 97.3 0.00029 1E-08 74.2 7.1 68 107-186 170-238 (364)
220 1ldn_A L-lactate dehydrogenase 97.3 0.00051 1.8E-08 70.4 8.7 70 112-189 7-85 (316)
221 1zh8_A Oxidoreductase; TM0312, 97.3 0.00049 1.7E-08 70.5 8.2 87 112-209 19-110 (340)
222 3o9z_A Lipopolysaccaride biosy 97.3 0.00058 2E-08 69.5 8.6 86 111-209 3-100 (312)
223 1p77_A Shikimate 5-dehydrogena 97.3 0.0001 3.4E-09 73.9 2.9 76 107-192 116-194 (272)
224 4gqa_A NAD binding oxidoreduct 97.3 0.00045 1.5E-08 72.4 8.0 92 112-209 27-124 (412)
225 2czc_A Glyceraldehyde-3-phosph 97.3 0.00067 2.3E-08 70.1 9.2 94 112-213 3-111 (334)
226 3oa2_A WBPB; oxidoreductase, s 97.2 0.00063 2.1E-08 69.5 8.5 86 111-209 3-101 (318)
227 1nyt_A Shikimate 5-dehydrogena 97.2 0.00026 8.9E-09 70.7 5.5 77 107-191 116-193 (271)
228 3e82_A Putative oxidoreductase 97.2 0.0012 4E-08 68.4 10.5 84 112-209 8-95 (364)
229 3f4l_A Putative oxidoreductase 97.2 0.00033 1.1E-08 71.7 6.3 85 112-209 3-93 (345)
230 3m2t_A Probable dehydrogenase; 97.2 0.00063 2.2E-08 70.3 8.3 87 112-209 6-96 (359)
231 1t2d_A LDH-P, L-lactate dehydr 97.2 0.0013 4.3E-08 67.8 10.4 66 112-186 5-80 (322)
232 3phh_A Shikimate dehydrogenase 97.2 0.00041 1.4E-08 70.3 6.4 88 110-211 118-208 (269)
233 2ixa_A Alpha-N-acetylgalactosa 97.2 0.0017 5.8E-08 69.1 11.1 89 112-209 21-119 (444)
234 2i6t_A Ubiquitin-conjugating e 97.1 0.0026 8.9E-08 65.1 11.4 65 111-186 14-85 (303)
235 3gdo_A Uncharacterized oxidore 97.1 0.0013 4.4E-08 67.8 9.2 84 112-209 6-93 (358)
236 3l9w_A Glutathione-regulated p 97.1 0.0019 6.4E-08 68.9 10.5 94 112-212 5-103 (413)
237 3kux_A Putative oxidoreductase 97.0 0.001 3.5E-08 68.3 7.7 83 112-209 8-95 (352)
238 3u3x_A Oxidoreductase; structu 97.0 0.0013 4.4E-08 68.1 8.5 86 112-209 27-116 (361)
239 4f3y_A DHPR, dihydrodipicolina 97.0 0.0033 1.1E-07 63.6 11.1 161 112-286 8-185 (272)
240 2vt3_A REX, redox-sensing tran 97.0 0.00038 1.3E-08 68.3 4.0 107 112-237 86-194 (215)
241 1ur5_A Malate dehydrogenase; o 97.0 0.0035 1.2E-07 63.9 11.3 67 112-187 3-79 (309)
242 3fhl_A Putative oxidoreductase 97.0 0.00092 3.1E-08 69.0 6.9 84 112-209 6-93 (362)
243 2nvw_A Galactose/lactose metab 97.0 0.0011 3.9E-08 71.6 7.6 82 112-198 40-128 (479)
244 4gmf_A Yersiniabactin biosynth 97.0 0.00052 1.8E-08 72.2 4.8 89 112-209 8-98 (372)
245 3oqb_A Oxidoreductase; structu 96.9 0.0012 4.1E-08 68.3 7.3 86 112-209 7-111 (383)
246 1nvm_B Acetaldehyde dehydrogen 96.9 0.0029 1E-07 65.0 10.0 94 112-213 5-105 (312)
247 3btv_A Galactose/lactose metab 96.9 0.001 3.5E-08 70.8 6.5 82 112-198 21-109 (438)
248 3keo_A Redox-sensing transcrip 96.9 0.0007 2.4E-08 66.5 4.6 110 112-237 85-197 (212)
249 1y6j_A L-lactate dehydrogenase 96.9 0.0031 1.1E-07 64.8 9.6 89 112-211 8-122 (318)
250 3jyo_A Quinate/shikimate dehyd 96.9 0.0013 4.3E-08 66.8 6.5 77 107-190 124-206 (283)
251 1oju_A MDH, malate dehydrogena 96.8 0.0042 1.4E-07 63.4 10.3 67 112-187 1-78 (294)
252 3ip3_A Oxidoreductase, putativ 96.8 0.0014 4.8E-08 66.8 6.5 86 112-209 3-95 (337)
253 1edz_A 5,10-methylenetetrahydr 96.8 0.00058 2E-08 70.9 3.5 96 107-213 174-276 (320)
254 1lc0_A Biliverdin reductase A; 96.8 0.001 3.5E-08 67.0 5.1 84 112-209 8-93 (294)
255 1pjc_A Protein (L-alanine dehy 96.8 0.0011 3.6E-08 69.1 5.2 98 107-212 164-267 (361)
256 3p7m_A Malate dehydrogenase; p 96.8 0.006 2E-07 63.0 10.7 70 108-187 3-82 (321)
257 4ew6_A D-galactose-1-dehydroge 96.7 0.0033 1.1E-07 64.4 8.6 80 112-209 26-109 (330)
258 3ijp_A DHPR, dihydrodipicolina 96.7 0.007 2.4E-07 62.0 10.9 161 112-286 22-200 (288)
259 3gvi_A Malate dehydrogenase; N 96.7 0.0066 2.3E-07 62.8 10.6 72 106-187 3-84 (324)
260 3fbt_A Chorismate mutase and s 96.7 0.00086 2.9E-08 68.3 3.9 69 108-189 120-189 (282)
261 1c1d_A L-phenylalanine dehydro 96.7 0.0027 9.2E-08 66.8 7.7 66 107-185 172-238 (355)
262 3ngx_A Bifunctional protein fo 96.7 0.0025 8.6E-08 65.0 7.2 74 108-212 148-222 (276)
263 3d0o_A L-LDH 1, L-lactate dehy 96.7 0.0067 2.3E-07 62.1 10.2 71 112-188 7-84 (317)
264 3nep_X Malate dehydrogenase; h 96.7 0.0039 1.3E-07 64.3 8.5 68 112-188 1-79 (314)
265 3pqe_A L-LDH, L-lactate dehydr 96.7 0.0046 1.6E-07 64.1 9.0 70 112-187 6-82 (326)
266 2d4a_B Malate dehydrogenase; a 96.6 0.005 1.7E-07 63.0 9.2 68 113-189 1-78 (308)
267 3l07_A Bifunctional protein fo 96.6 0.0039 1.3E-07 63.8 8.0 76 106-212 157-233 (285)
268 3abi_A Putative uncharacterize 96.6 0.0038 1.3E-07 64.6 8.0 95 106-213 10-109 (365)
269 3fef_A Putative glucosidase LP 96.6 0.0029 9.9E-08 68.5 7.3 76 112-195 6-92 (450)
270 1b7g_O Protein (glyceraldehyde 96.6 0.0082 2.8E-07 62.4 10.3 94 112-213 2-109 (340)
271 1npy_A Hypothetical shikimate 96.6 0.0026 8.8E-08 64.2 6.2 69 109-190 118-187 (271)
272 3ldh_A Lactate dehydrogenase; 96.6 0.0053 1.8E-07 63.9 8.7 69 112-187 22-98 (330)
273 2axq_A Saccharopine dehydrogen 96.5 0.0032 1.1E-07 68.2 7.0 97 106-211 19-118 (467)
274 1ez4_A Lactate dehydrogenase; 96.5 0.0069 2.3E-07 62.3 9.2 68 112-189 6-83 (318)
275 2zqz_A L-LDH, L-lactate dehydr 96.5 0.0072 2.5E-07 62.4 9.4 68 112-189 10-87 (326)
276 3p2o_A Bifunctional protein fo 96.5 0.0031 1.1E-07 64.6 6.5 76 106-212 156-232 (285)
277 4a26_A Putative C-1-tetrahydro 96.5 0.0031 1.1E-07 65.0 6.5 76 106-212 161-239 (300)
278 3do5_A HOM, homoserine dehydro 96.4 0.0086 2.9E-07 62.0 9.4 98 111-211 2-114 (327)
279 1cf2_P Protein (glyceraldehyde 96.4 0.0082 2.8E-07 62.3 9.2 96 111-214 1-111 (337)
280 3tnl_A Shikimate dehydrogenase 96.3 0.0059 2E-07 63.1 7.4 78 107-191 151-239 (315)
281 3t4e_A Quinate/shikimate dehyd 96.3 0.0052 1.8E-07 63.4 6.8 77 107-190 145-232 (312)
282 1ff9_A Saccharopine reductase; 96.3 0.006 2E-07 65.6 7.4 80 109-195 2-85 (450)
283 2xxj_A L-LDH, L-lactate dehydr 96.2 0.0072 2.5E-07 61.8 7.4 67 112-188 1-77 (310)
284 2yyy_A Glyceraldehyde-3-phosph 96.2 0.023 7.9E-07 59.3 11.2 92 112-214 3-115 (343)
285 3vku_A L-LDH, L-lactate dehydr 96.2 0.014 4.7E-07 60.6 9.3 70 112-187 10-85 (326)
286 4a5o_A Bifunctional protein fo 96.2 0.0097 3.3E-07 60.9 8.0 76 106-212 157-233 (286)
287 1jw9_B Molybdopterin biosynthe 96.2 0.013 4.3E-07 58.0 8.6 87 105-198 26-141 (249)
288 4ina_A Saccharopine dehydrogen 96.2 0.0064 2.2E-07 64.2 6.8 95 111-214 1-109 (405)
289 3tl2_A Malate dehydrogenase; c 96.1 0.011 3.8E-07 60.8 8.2 66 112-186 9-86 (315)
290 3upl_A Oxidoreductase; rossman 96.1 0.013 4.3E-07 63.5 8.8 86 112-209 24-136 (446)
291 1dih_A Dihydrodipicolinate red 96.1 0.011 3.7E-07 59.6 7.8 161 112-286 6-184 (273)
292 1b0a_A Protein (fold bifunctio 96.1 0.0095 3.3E-07 61.1 7.2 76 106-212 155-231 (288)
293 2dt5_A AT-rich DNA-binding pro 96.1 0.0022 7.4E-08 62.7 2.3 81 112-200 81-162 (211)
294 1nvt_A Shikimate 5'-dehydrogen 96.0 0.0038 1.3E-07 62.7 3.8 73 107-190 125-205 (287)
295 1a4i_A Methylenetetrahydrofola 96.0 0.014 4.6E-07 60.3 7.8 76 106-212 161-237 (301)
296 1mld_A Malate dehydrogenase; o 95.9 0.024 8.3E-07 58.0 9.6 68 112-187 1-77 (314)
297 4aj2_A L-lactate dehydrogenase 95.9 0.017 6E-07 59.9 8.4 71 108-186 17-95 (331)
298 3ff4_A Uncharacterized protein 95.7 0.02 6.7E-07 51.4 7.0 109 112-244 5-117 (122)
299 3tum_A Shikimate dehydrogenase 95.7 0.0068 2.3E-07 61.2 4.3 98 107-211 122-224 (269)
300 3ius_A Uncharacterized conserv 95.6 0.056 1.9E-06 52.4 10.4 68 112-188 6-73 (286)
301 1ys4_A Aspartate-semialdehyde 95.6 0.027 9.2E-07 58.5 8.5 93 112-214 9-116 (354)
302 4g65_A TRK system potassium up 95.5 0.019 6.4E-07 61.9 7.2 74 112-192 4-82 (461)
303 1vl6_A Malate oxidoreductase; 95.5 0.035 1.2E-06 59.0 9.1 89 107-209 189-291 (388)
304 1lnq_A MTHK channels, potassiu 95.5 0.032 1.1E-06 56.7 8.4 91 112-211 116-211 (336)
305 1obb_A Maltase, alpha-glucosid 95.5 0.038 1.3E-06 60.3 9.3 73 112-188 4-87 (480)
306 3e8x_A Putative NAD-dependent 95.4 0.051 1.7E-06 51.5 9.2 75 105-188 16-94 (236)
307 3dfz_A SIRC, precorrin-2 dehyd 95.4 0.053 1.8E-06 53.4 9.1 89 100-198 22-111 (223)
308 3ing_A Homoserine dehydrogenas 95.3 0.039 1.3E-06 57.1 8.3 98 112-211 5-116 (325)
309 2c2x_A Methylenetetrahydrofola 95.3 0.029 9.9E-07 57.3 7.1 77 107-212 155-232 (281)
310 3fi9_A Malate dehydrogenase; s 95.2 0.042 1.4E-06 57.3 8.5 74 106-186 4-84 (343)
311 2ozp_A N-acetyl-gamma-glutamyl 95.1 0.038 1.3E-06 57.4 7.8 93 112-213 5-100 (345)
312 1j5p_A Aspartate dehydrogenase 95.1 0.024 8.1E-07 57.1 6.0 80 112-213 13-93 (253)
313 2dvm_A Malic enzyme, 439AA lon 95.1 0.042 1.4E-06 59.3 8.3 93 106-211 182-295 (439)
314 1xyg_A Putative N-acetyl-gamma 95.1 0.041 1.4E-06 57.5 7.8 92 112-213 17-113 (359)
315 2csu_A 457AA long hypothetical 94.8 0.045 1.6E-06 58.9 7.6 91 108-215 6-100 (457)
316 3dr3_A N-acetyl-gamma-glutamyl 94.8 0.069 2.4E-06 55.6 8.7 93 111-213 4-107 (337)
317 3eag_A UDP-N-acetylmuramate:L- 94.7 0.083 2.8E-06 53.9 8.9 70 111-188 4-78 (326)
318 3mtj_A Homoserine dehydrogenas 94.7 0.11 3.8E-06 56.1 10.2 92 112-211 11-109 (444)
319 1zud_1 Adenylyltransferase THI 94.6 0.078 2.7E-06 52.4 8.0 87 105-198 23-138 (251)
320 3r6d_A NAD-dependent epimerase 94.5 0.12 4E-06 48.5 8.6 72 112-189 6-84 (221)
321 3ew7_A LMO0794 protein; Q8Y8U8 94.5 0.12 4.3E-06 47.6 8.7 69 112-188 1-71 (221)
322 2ep5_A 350AA long hypothetical 94.4 0.072 2.5E-06 55.3 7.7 91 112-213 5-109 (350)
323 1ebf_A Homoserine dehydrogenas 94.4 0.036 1.2E-06 58.0 5.3 22 112-133 5-26 (358)
324 1u8f_O GAPDH, glyceraldehyde-3 94.4 0.13 4.3E-06 53.4 9.3 93 112-213 4-124 (335)
325 1smk_A Malate dehydrogenase, g 94.3 0.15 5.1E-06 52.3 9.6 67 112-187 9-85 (326)
326 3qvo_A NMRA family protein; st 94.3 0.062 2.1E-06 51.2 6.3 94 112-212 24-125 (236)
327 2x0j_A Malate dehydrogenase; o 94.3 0.044 1.5E-06 56.1 5.5 69 112-186 1-77 (294)
328 1duv_G Octase-1, ornithine tra 94.2 0.23 8E-06 51.7 11.0 70 107-187 152-233 (333)
329 1dxh_A Ornithine carbamoyltran 94.2 0.24 8.2E-06 51.7 11.0 70 107-187 152-233 (335)
330 1np3_A Ketol-acid reductoisome 94.1 0.041 1.4E-06 56.6 5.0 111 451-563 200-328 (338)
331 1qyc_A Phenylcoumaran benzylic 94.1 0.14 4.7E-06 50.1 8.6 73 111-189 4-88 (308)
332 1pvv_A Otcase, ornithine carba 94.1 0.31 1.1E-05 50.4 11.5 69 107-186 152-231 (315)
333 1u8x_X Maltose-6'-phosphate gl 94.0 0.12 4E-06 56.2 8.4 78 112-191 29-115 (472)
334 2ejw_A HDH, homoserine dehydro 93.9 0.051 1.8E-06 56.4 5.4 88 112-210 4-96 (332)
335 1s6y_A 6-phospho-beta-glucosid 93.9 0.14 4.7E-06 55.3 8.8 75 112-190 8-95 (450)
336 1p9l_A Dihydrodipicolinate red 93.8 0.22 7.6E-06 49.5 9.5 144 112-285 1-156 (245)
337 1lu9_A Methylene tetrahydromet 93.7 0.067 2.3E-06 53.3 5.6 74 108-188 117-198 (287)
338 3lk7_A UDP-N-acetylmuramoylala 93.7 0.083 2.8E-06 56.3 6.5 70 107-185 6-79 (451)
339 2r6j_A Eugenol synthase 1; phe 93.6 0.21 7.3E-06 49.3 8.9 72 112-189 12-90 (318)
340 1o6z_A MDH, malate dehydrogena 93.6 0.16 5.5E-06 51.5 8.2 66 112-187 1-79 (303)
341 1hdo_A Biliverdin IX beta redu 93.5 0.25 8.6E-06 44.9 8.6 70 112-188 4-77 (206)
342 1p0f_A NADP-dependent alcohol 93.4 0.47 1.6E-05 48.6 11.5 91 109-210 191-291 (373)
343 3ip1_A Alcohol dehydrogenase, 93.4 0.52 1.8E-05 49.1 12.0 95 109-211 213-317 (404)
344 1b8p_A Protein (malate dehydro 93.3 0.17 5.7E-06 51.9 7.8 70 112-187 6-92 (329)
345 3c8m_A Homoserine dehydrogenas 93.3 0.2 7E-06 51.6 8.5 94 112-211 7-120 (331)
346 1p3d_A UDP-N-acetylmuramate--a 93.2 0.17 5.8E-06 54.2 8.1 68 109-185 16-84 (475)
347 4hv4_A UDP-N-acetylmuramate--L 93.2 0.15 5.2E-06 55.1 7.7 69 111-188 22-93 (494)
348 3tpf_A Otcase, ornithine carba 93.2 0.36 1.2E-05 49.8 10.0 71 107-186 142-222 (307)
349 2cdc_A Glucose dehydrogenase g 93.1 0.15 5.1E-06 52.3 7.2 92 107-210 178-276 (366)
350 1e3i_A Alcohol dehydrogenase, 93.1 0.52 1.8E-05 48.3 11.2 91 109-210 195-295 (376)
351 3two_A Mannitol dehydrogenase; 93.1 0.17 5.8E-06 51.4 7.4 89 109-211 176-264 (348)
352 2d8a_A PH0655, probable L-thre 93.1 0.17 5.8E-06 51.4 7.4 92 109-211 167-266 (348)
353 4gx0_A TRKA domain protein; me 93.1 0.17 5.9E-06 55.0 7.9 89 112-209 349-440 (565)
354 2gas_A Isoflavone reductase; N 93.0 0.25 8.7E-06 48.1 8.4 71 112-188 3-86 (307)
355 3i6i_A Putative leucoanthocyan 93.0 0.25 8.7E-06 49.5 8.6 72 112-189 11-94 (346)
356 2i6u_A Otcase, ornithine carba 93.0 0.22 7.5E-06 51.4 8.1 69 107-186 145-225 (307)
357 1cdo_A Alcohol dehydrogenase; 92.9 0.59 2E-05 47.9 11.3 91 109-210 192-292 (374)
358 2jhf_A Alcohol dehydrogenase E 92.9 0.55 1.9E-05 48.1 11.1 91 109-210 191-291 (374)
359 3dqp_A Oxidoreductase YLBE; al 92.9 0.28 9.5E-06 45.8 8.1 69 112-189 1-74 (219)
360 4f2g_A Otcase 1, ornithine car 92.9 0.14 4.8E-06 52.8 6.5 69 107-186 151-224 (309)
361 1vlv_A Otcase, ornithine carba 92.8 0.22 7.6E-06 51.7 7.9 70 107-187 164-245 (325)
362 2fzw_A Alcohol dehydrogenase c 92.7 0.6 2E-05 47.7 11.0 91 109-210 190-290 (373)
363 1oth_A Protein (ornithine tran 92.7 0.27 9.4E-06 50.9 8.4 69 107-186 152-231 (321)
364 2nqt_A N-acetyl-gamma-glutamyl 92.7 0.12 4E-06 54.1 5.7 90 111-214 9-112 (352)
365 4a2c_A Galactitol-1-phosphate 92.6 0.53 1.8E-05 47.4 10.3 94 108-211 159-259 (346)
366 4ej6_A Putative zinc-binding d 92.6 0.32 1.1E-05 50.2 8.7 92 109-211 182-283 (370)
367 3gd5_A Otcase, ornithine carba 92.5 0.25 8.7E-06 51.3 7.9 84 92-186 127-233 (323)
368 3uko_A Alcohol dehydrogenase c 92.5 0.47 1.6E-05 48.8 9.9 92 109-211 193-294 (378)
369 1qyd_A Pinoresinol-lariciresin 92.4 0.4 1.4E-05 46.9 8.8 72 111-188 4-86 (313)
370 4b4u_A Bifunctional protein fo 92.4 0.27 9.1E-06 50.7 7.8 77 107-215 176-253 (303)
371 3h2s_A Putative NADH-flavin re 92.4 0.56 1.9E-05 43.5 9.4 70 112-188 1-72 (224)
372 3c1o_A Eugenol synthase; pheny 92.4 0.34 1.2E-05 47.7 8.4 72 111-188 4-87 (321)
373 3e5r_O PP38, glyceraldehyde-3- 92.3 0.33 1.1E-05 50.4 8.5 93 112-212 4-126 (337)
374 1vkn_A N-acetyl-gamma-glutamyl 92.3 0.2 7E-06 52.4 6.9 91 111-214 13-109 (351)
375 4ep1_A Otcase, ornithine carba 92.3 0.3 1E-05 51.1 8.1 69 107-186 176-255 (340)
376 1f8f_A Benzyl alcohol dehydrog 92.2 0.29 9.9E-06 50.2 7.8 92 109-211 190-288 (371)
377 3gg2_A Sugar dehydrogenase, UD 92.2 0.39 1.3E-05 51.5 9.1 94 106-214 314-421 (450)
378 2wm3_A NMRA-like family domain 92.2 0.5 1.7E-05 46.1 9.2 71 112-188 6-82 (299)
379 3ruf_A WBGU; rossmann fold, UD 92.1 0.49 1.7E-05 47.2 9.2 74 107-187 22-109 (351)
380 3s2e_A Zinc-containing alcohol 92.1 0.34 1.2E-05 48.9 8.1 92 109-211 166-262 (340)
381 1y1p_A ARII, aldehyde reductas 92.0 0.57 2E-05 46.1 9.5 75 106-187 7-92 (342)
382 2dph_A Formaldehyde dismutase; 92.0 0.19 6.3E-06 52.3 6.2 95 109-211 185-298 (398)
383 3dhn_A NAD-dependent epimerase 92.0 0.17 5.9E-06 47.2 5.4 71 111-189 4-78 (227)
384 2w37_A Ornithine carbamoyltran 92.0 0.32 1.1E-05 51.2 7.9 70 107-187 173-254 (359)
385 3fpf_A Mtnas, putative unchara 91.8 0.46 1.6E-05 48.7 8.8 92 107-209 120-219 (298)
386 1kol_A Formaldehyde dehydrogen 91.8 0.31 1.1E-05 50.4 7.6 95 109-211 185-299 (398)
387 2f00_A UDP-N-acetylmuramate--L 91.8 0.34 1.2E-05 52.2 8.1 68 109-185 17-85 (491)
388 1e3j_A NADP(H)-dependent ketos 91.8 0.71 2.4E-05 46.9 10.1 92 109-211 168-270 (352)
389 4h7p_A Malate dehydrogenase; s 91.7 0.7 2.4E-05 48.2 10.1 80 105-186 19-108 (345)
390 3uog_A Alcohol dehydrogenase; 91.7 0.2 7E-06 51.3 6.0 91 109-211 189-286 (363)
391 1pqw_A Polyketide synthase; ro 91.7 0.38 1.3E-05 44.5 7.3 92 109-212 38-137 (198)
392 3h8v_A Ubiquitin-like modifier 91.7 0.7 2.4E-05 47.2 9.8 44 98-148 24-68 (292)
393 1pl8_A Human sorbitol dehydrog 91.6 0.62 2.1E-05 47.4 9.5 92 109-211 171-272 (356)
394 1ml4_A Aspartate transcarbamoy 91.6 0.25 8.4E-06 51.0 6.4 72 107-187 152-230 (308)
395 3hhp_A Malate dehydrogenase; M 91.5 0.46 1.6E-05 48.7 8.3 71 112-187 1-78 (312)
396 3gpi_A NAD-dependent epimerase 91.3 0.26 8.7E-06 47.9 6.0 66 112-188 4-73 (286)
397 3d6n_B Aspartate carbamoyltran 91.2 0.23 7.8E-06 50.9 5.7 70 107-189 143-215 (291)
398 4a7p_A UDP-glucose dehydrogena 91.1 0.47 1.6E-05 51.1 8.3 94 106-214 318-424 (446)
399 4amu_A Ornithine carbamoyltran 91.1 0.47 1.6E-05 50.1 8.1 70 107-185 177-258 (365)
400 3gaz_A Alcohol dehydrogenase s 91.1 0.48 1.7E-05 48.1 8.0 90 109-212 150-246 (343)
401 2ph5_A Homospermidine synthase 91.0 0.33 1.1E-05 53.0 7.0 92 112-212 14-114 (480)
402 1pjq_A CYSG, siroheme synthase 91.0 0.89 3E-05 48.8 10.3 83 106-197 8-92 (457)
403 3r7f_A Aspartate carbamoyltran 90.9 0.42 1.4E-05 49.2 7.4 65 107-186 144-211 (304)
404 1rjw_A ADH-HT, alcohol dehydro 90.9 0.39 1.3E-05 48.7 7.1 91 109-210 164-259 (339)
405 1sb8_A WBPP; epimerase, 4-epim 90.9 0.76 2.6E-05 45.9 9.2 73 108-187 25-111 (352)
406 3grf_A Ornithine carbamoyltran 90.9 0.53 1.8E-05 48.9 8.1 70 107-185 158-241 (328)
407 1iz0_A Quinone oxidoreductase; 90.8 0.23 7.8E-06 49.3 5.2 90 109-211 125-217 (302)
408 2o7s_A DHQ-SDH PR, bifunctiona 90.7 0.23 7.9E-06 54.1 5.6 48 107-161 361-408 (523)
409 1t4b_A Aspartate-semialdehyde 90.7 0.39 1.3E-05 50.4 7.0 93 111-214 1-100 (367)
410 4dpl_A Malonyl-COA/succinyl-CO 90.7 0.62 2.1E-05 48.8 8.5 89 112-214 8-112 (359)
411 4dpk_A Malonyl-COA/succinyl-CO 90.7 0.62 2.1E-05 48.8 8.5 89 112-214 8-112 (359)
412 1piw_A Hypothetical zinc-type 90.6 0.31 1.1E-05 49.8 6.1 91 109-210 179-274 (360)
413 2hcy_A Alcohol dehydrogenase 1 90.5 0.99 3.4E-05 45.7 9.7 92 109-211 169-268 (347)
414 4a0s_A Octenoyl-COA reductase/ 90.4 0.66 2.2E-05 48.8 8.6 87 109-211 220-335 (447)
415 1kyq_A Met8P, siroheme biosynt 90.4 1.1 3.6E-05 45.5 9.6 37 106-149 9-45 (274)
416 3e05_A Precorrin-6Y C5,15-meth 90.3 1.2 4.2E-05 41.0 9.4 92 109-211 40-141 (204)
417 3fpc_A NADP-dependent alcohol 90.3 0.31 1.1E-05 49.5 5.8 92 109-211 166-265 (352)
418 4eye_A Probable oxidoreductase 90.2 0.39 1.3E-05 48.7 6.4 90 109-211 159-256 (342)
419 3fbg_A Putative arginate lyase 90.2 0.57 1.9E-05 47.6 7.6 93 109-212 150-248 (346)
420 2ef0_A Ornithine carbamoyltran 90.2 0.84 2.9E-05 46.9 8.8 70 107-187 151-222 (301)
421 2q3e_A UDP-glucose 6-dehydroge 90.2 0.96 3.3E-05 48.4 9.7 96 107-214 326-445 (467)
422 2fk8_A Methoxy mycolic acid sy 90.1 1.4 4.7E-05 43.7 10.2 90 109-210 90-192 (318)
423 1uuf_A YAHK, zinc-type alcohol 90.1 0.45 1.5E-05 49.1 6.8 90 109-211 194-287 (369)
424 3gms_A Putative NADPH:quinone 90.1 0.67 2.3E-05 46.8 7.9 92 108-211 143-242 (340)
425 4g65_A TRK system potassium up 90.0 1.4 4.8E-05 47.3 10.9 96 112-214 236-336 (461)
426 3sds_A Ornithine carbamoyltran 90.0 0.68 2.3E-05 48.6 8.1 68 108-186 186-266 (353)
427 3g79_A NDP-N-acetyl-D-galactos 90.0 0.67 2.3E-05 50.4 8.4 91 107-214 350-452 (478)
428 3qwb_A Probable quinone oxidor 90.0 0.39 1.3E-05 48.3 6.2 92 108-211 147-246 (334)
429 3q2o_A Phosphoribosylaminoimid 89.9 0.29 9.9E-06 50.6 5.2 36 107-149 11-46 (389)
430 3jyn_A Quinone oxidoreductase; 89.9 0.43 1.5E-05 47.9 6.4 92 109-212 140-239 (325)
431 4fs3_A Enoyl-[acyl-carrier-pro 89.9 0.72 2.4E-05 45.0 7.7 89 107-215 3-97 (256)
432 3hn7_A UDP-N-acetylmuramate-L- 89.9 0.74 2.5E-05 50.1 8.6 74 106-188 15-92 (524)
433 2yfk_A Aspartate/ornithine car 89.8 0.61 2.1E-05 50.1 7.7 68 108-186 186-271 (418)
434 1gtm_A Glutamate dehydrogenase 89.8 0.31 1.1E-05 52.2 5.4 35 108-149 210-245 (419)
435 1yqd_A Sinapyl alcohol dehydro 89.7 0.37 1.3E-05 49.5 5.8 87 109-209 187-279 (366)
436 1v3u_A Leukotriene B4 12- hydr 89.7 0.78 2.7E-05 46.0 8.1 91 109-211 145-243 (333)
437 3slg_A PBGP3 protein; structur 89.7 0.46 1.6E-05 47.9 6.4 80 101-186 15-99 (372)
438 2r00_A Aspartate-semialdehyde 89.7 0.4 1.4E-05 49.5 6.1 90 112-214 4-98 (336)
439 4id9_A Short-chain dehydrogena 89.7 0.66 2.3E-05 46.1 7.5 69 105-187 14-86 (347)
440 4b7c_A Probable oxidoreductase 89.7 0.57 1.9E-05 47.1 7.0 92 109-212 149-248 (336)
441 2c0c_A Zinc binding alcohol de 89.6 0.65 2.2E-05 47.6 7.5 92 109-212 163-261 (362)
442 2pzm_A Putative nucleotide sug 89.6 0.4 1.4E-05 47.8 5.8 78 103-187 13-97 (330)
443 7mdh_A Protein (malate dehydro 89.5 1.2 4.2E-05 47.0 9.6 69 112-186 33-116 (375)
444 3hsk_A Aspartate-semialdehyde 89.4 0.89 3E-05 48.1 8.5 90 112-214 20-126 (381)
445 3m2p_A UDP-N-acetylglucosamine 89.3 0.5 1.7E-05 46.4 6.2 66 112-187 3-71 (311)
446 2h1q_A Hypothetical protein; Z 89.1 0.73 2.5E-05 46.6 7.3 83 99-205 130-212 (270)
447 2b5w_A Glucose dehydrogenase; 89.1 0.84 2.9E-05 46.5 7.8 92 108-211 171-272 (357)
448 4a8t_A Putrescine carbamoyltra 89.0 0.7 2.4E-05 48.3 7.3 70 107-186 172-250 (339)
449 3tqh_A Quinone oxidoreductase; 89.0 0.52 1.8E-05 47.2 6.2 91 108-211 151-244 (321)
450 3csu_A Protein (aspartate carb 89.0 0.87 3E-05 47.0 7.9 73 106-186 150-229 (310)
451 2o3j_A UDP-glucose 6-dehydroge 89.0 1.1 3.8E-05 48.2 9.1 97 107-214 332-449 (481)
452 3gqv_A Enoyl reductase; medium 88.9 2.9 9.8E-05 42.9 11.8 93 108-212 163-263 (371)
453 1xgk_A Nitrogen metabolite rep 88.9 2.7 9.3E-05 42.7 11.6 70 112-187 6-82 (352)
454 3nkl_A UDP-D-quinovosamine 4-d 88.9 0.77 2.6E-05 40.1 6.5 94 112-214 5-101 (141)
455 4ffl_A PYLC; amino acid, biosy 88.9 0.45 1.5E-05 48.4 5.6 32 111-148 1-32 (363)
456 2bka_A CC3, TAT-interacting pr 88.9 0.85 2.9E-05 42.9 7.2 73 108-188 16-94 (242)
457 4dup_A Quinone oxidoreductase; 88.9 0.59 2E-05 47.7 6.5 91 109-211 167-264 (353)
458 3q98_A Transcarbamylase; rossm 88.6 0.92 3.2E-05 48.4 8.0 71 107-186 188-274 (399)
459 3cps_A Glyceraldehyde 3-phosph 88.5 0.89 3E-05 47.7 7.6 94 111-213 17-139 (354)
460 3goh_A Alcohol dehydrogenase, 88.4 0.6 2E-05 46.6 6.1 87 109-211 142-228 (315)
461 3o38_A Short chain dehydrogena 88.4 0.51 1.7E-05 45.6 5.4 89 106-214 18-111 (266)
462 4a8p_A Putrescine carbamoyltra 88.4 0.81 2.8E-05 48.1 7.3 70 107-186 150-228 (355)
463 3jv7_A ADH-A; dehydrogenase, n 88.3 1 3.4E-05 45.5 7.8 92 108-211 170-269 (345)
464 1orr_A CDP-tyvelose-2-epimeras 88.1 3.7 0.00013 40.4 11.6 71 111-187 1-82 (347)
465 4dvj_A Putative zinc-dependent 88.1 1.3 4.4E-05 45.5 8.5 91 109-211 171-269 (363)
466 3e48_A Putative nucleoside-dip 88.0 1.4 4.7E-05 42.7 8.2 71 112-188 1-75 (289)
467 4gx0_A TRKA domain protein; me 87.9 1.5 5.1E-05 47.6 9.3 72 112-191 128-204 (565)
468 2a9f_A Putative malic enzyme ( 87.9 0.67 2.3E-05 49.4 6.3 92 107-212 185-289 (398)
469 3oh8_A Nucleoside-diphosphate 87.8 2.5 8.7E-05 45.3 10.9 62 112-187 148-210 (516)
470 2q1s_A Putative nucleotide sug 87.6 0.68 2.3E-05 47.0 6.0 75 107-188 29-109 (377)
471 1qor_A Quinone oxidoreductase; 87.6 0.82 2.8E-05 45.8 6.5 91 109-211 140-238 (327)
472 3m6i_A L-arabinitol 4-dehydrog 87.5 2 6.8E-05 43.6 9.5 92 109-211 179-282 (363)
473 1kpg_A CFA synthase;, cyclopro 87.5 2.7 9.1E-05 40.8 10.0 89 109-210 64-166 (287)
474 2cf5_A Atccad5, CAD, cinnamyl 87.5 0.68 2.3E-05 47.3 5.9 89 109-210 180-273 (357)
475 3pwk_A Aspartate-semialdehyde 87.5 0.35 1.2E-05 50.9 3.8 88 112-214 3-97 (366)
476 2x5o_A UDP-N-acetylmuramoylala 87.4 0.38 1.3E-05 51.0 4.1 69 108-186 3-72 (439)
477 3orq_A N5-carboxyaminoimidazol 87.4 0.37 1.3E-05 49.9 3.9 34 108-148 10-43 (377)
478 1yb1_A 17-beta-hydroxysteroid 87.3 1.8 6E-05 42.1 8.6 44 99-149 20-64 (272)
479 2hjs_A USG-1 protein homolog; 87.2 0.57 1.9E-05 48.5 5.2 89 112-213 7-100 (340)
480 1vj0_A Alcohol dehydrogenase, 87.1 0.99 3.4E-05 46.5 7.0 90 109-209 195-295 (380)
481 1wly_A CAAR, 2-haloacrylate re 86.9 0.93 3.2E-05 45.6 6.5 91 109-211 145-243 (333)
482 2vn8_A Reticulon-4-interacting 86.8 3.8 0.00013 41.9 11.1 93 109-212 183-280 (375)
483 3h5n_A MCCB protein; ubiquitin 86.8 1.4 4.9E-05 45.7 8.0 37 105-148 113-150 (353)
484 2j3h_A NADP-dependent oxidored 86.7 0.92 3.1E-05 45.7 6.4 91 109-211 155-254 (345)
485 1y7t_A Malate dehydrogenase; N 86.7 0.7 2.4E-05 46.8 5.4 68 112-186 5-88 (327)
486 3rui_A Ubiquitin-like modifier 86.6 1.4 4.8E-05 46.0 7.8 36 105-147 29-65 (340)
487 1zsy_A Mitochondrial 2-enoyl t 86.6 2.8 9.6E-05 42.6 10.0 89 109-212 167-270 (357)
488 2y0c_A BCEC, UDP-glucose dehyd 86.5 2.5 8.6E-05 45.6 10.0 93 107-214 325-441 (478)
489 3aog_A Glutamate dehydrogenase 86.5 1.1 3.9E-05 48.3 7.2 32 106-144 231-262 (440)
490 2z1m_A GDP-D-mannose dehydrata 86.2 1.3 4.5E-05 43.5 7.0 37 108-151 1-38 (345)
491 2nxc_A L11 mtase, ribosomal pr 86.2 1.9 6.3E-05 42.0 8.0 90 109-211 120-217 (254)
492 4hb9_A Similarities with proba 86.1 0.72 2.5E-05 46.3 5.2 32 112-149 2-33 (412)
493 2o23_A HADH2 protein; HSD17B10 86.1 2.5 8.6E-05 40.2 8.8 87 107-214 9-96 (265)
494 2x4g_A Nucleoside-diphosphate- 86.0 1.4 4.7E-05 43.5 7.1 69 112-187 14-86 (342)
495 3kkj_A Amine oxidase, flavin-c 86.0 0.67 2.3E-05 41.3 4.4 31 113-149 4-34 (336)
496 1y8q_A Ubiquitin-like 1 activa 86.0 2.1 7.2E-05 44.3 8.7 89 104-199 30-146 (346)
497 1yb5_A Quinone oxidoreductase; 85.9 1.5 5.2E-05 44.7 7.6 89 109-209 170-266 (351)
498 2qrj_A Saccharopine dehydrogen 85.9 0.37 1.3E-05 51.3 3.0 79 112-212 215-300 (394)
499 3u95_A Glycoside hydrolase, fa 85.7 0.94 3.2E-05 49.1 6.2 75 112-186 1-84 (477)
500 3rwb_A TPLDH, pyridoxal 4-dehy 85.7 1.8 6.3E-05 41.5 7.7 88 106-214 2-90 (247)
No 1
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=100.00 E-value=4.7e-154 Score=1243.62 Aligned_cols=514 Identities=88% Similarity=1.349 Sum_probs=480.5
Q ss_pred CccccccccchhhhhhhccccccceeeeccccccccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEe
Q 007987 68 TPFLLDFETSVFKKDMISLADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGL 147 (582)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~e~i~~~~r~~f~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~ 147 (582)
++++++|||++|.+++++|+|++|+||++|||+|+++++.|+|+|||||||+|+||+++|++|+++++++|+|++|++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~g~~E~v~~~~~w~~~~~~~~L~GiKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~ 90 (525)
T 3fr7_A 11 AMPSLDFDTSVFNKEKVSLAGHEEYIVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGL 90 (525)
T ss_dssp ----CCCCCSSSCEEEEEETTEEEEEEECCGGGGGGHHHHTTTCSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cccccccccccceeeEeecCCcceEEEeccccccccChHHhcCCCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEe
Confidence 45779999999999999999999999999999999889999999999999999999999999999988999999999999
Q ss_pred cCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCC
Q 007987 148 RKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFP 227 (582)
Q Consensus 148 r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p 227 (582)
+.++++++.|.+.|+...|+++.++.|++++||+|||++||+.+.+++++|+++|++|++|+++|||+++++++.++.+|
T Consensus 91 r~~sks~e~A~e~G~~v~d~ta~s~aEAa~~ADVVILaVP~~~~~eVl~eI~p~LK~GaILs~AaGf~I~~le~~~i~~p 170 (525)
T 3fr7_A 91 RKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSILGLSHGFLLGHLQSAGLDFP 170 (525)
T ss_dssp CTTCSCHHHHHHTTCCTTTTCEEEHHHHHHHCSEEEECSCHHHHHHHHHHHHHHSCTTCEEEESSSHHHHHHHHTTCCCC
T ss_pred CCchhhHHHHHHCCCEEecCCCCCHHHHHhcCCEEEECCChHHHHHHHHHHHHhcCCCCeEEEeCCCCHHHHhhhcccCC
Confidence 98888999999999984234446899999999999999999999999999999999999999999999999876677899
Q ss_pred CCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh-
Q 007987 228 KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER- 306 (582)
Q Consensus 228 ~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq- 306 (582)
++++|||+|||+|+++||++|.+|+++||+|+|++|+++||+++++++++++|++++|+.++++|+|++|+++|+|+||
T Consensus 171 ~dv~VVrVmPNtPg~~VR~~y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~vieTtf~eE~e~DLfgeqt 250 (525)
T 3fr7_A 171 KNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERG 250 (525)
T ss_dssp TTSEEEEEEESSCHHHHHHHHHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHT
T ss_pred CCCcEEEEecCCCchhHHHHHhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCeeeeeeeeeehhHhhhhhHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCcchhhhhhhhhcccchhHHHHHHH
Q 007987 307 ILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYE 386 (582)
Q Consensus 307 vLsG~~pAlieAl~d~lVe~Gl~pe~Ay~~~~~ei~glia~lI~e~Gi~~m~d~vS~~~~aeyg~~~~~~~~p~~~~m~e 386 (582)
+|||++|+||+++||++|++|||||+||++|+|+|+++|++||+++|+.+|+++||||++++||++|+..+.|+|++|++
T Consensus 251 vLsG~~pAlieA~~d~lVe~G~~pe~Ay~~~~qel~~~i~~li~e~G~~~m~~~~S~ta~~~~~~~~~~~~~~~~~~m~~ 330 (525)
T 3fr7_A 251 ILLGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYE 330 (525)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTHHHHHHHHHCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCcHHHHHHHHHhccchHHHHHHHHH
Confidence 99999999999999999999999999999999999977999999999999999999999999999988878999999999
Q ss_pred HHHhccCChhhhHHHHhcccccccCCCCCCcchhhhcChHHHHHHHHHccCCCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 007987 387 CYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLHPFTAGVYAALMMAQIEILRK 466 (582)
Q Consensus 387 ~~~~I~sG~far~~i~e~~~~~~~~g~~~~~~~~i~~~~ie~vG~~lRa~~~~~~~g~~~p~t~gv~~~~~~a~~~~l~~ 466 (582)
+|++||+|+|+|+|+++|+++||++|+|.|++++|++|+|||||++||++||++++||+||||+|||+|+||||||+||+
T Consensus 331 ~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vr~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (525)
T 3fr7_A 331 CYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGEKVRSTRPENDLGPLHPFTAGVYVALMMAQIEVLRK 410 (525)
T ss_dssp HHHHHHHSHHHHHHHHHHHTTSCBTTBCCCCCCCSTTSHHHHHHHHHHHHCCTTCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHhcCccchhccccccchhhhcccHHHHHHHHHHhcCCcccCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCChhhhhhhhHHHHhhhcchhhhhccchhhhhccchhhhccccccccchhHHHHHHHHhhhcCCCccchhHHHhhhcC
Q 007987 467 KGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDNDAPINGDLISNFLSD 546 (582)
Q Consensus 467 ~~~~~s~~~~e~~~e~~~~l~p~~~~~~~~~m~~~~s~ta~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (582)
|||||||+|||||||+|||||||||+|||+|||||||||||||+|||+|||||+|.||+|++|+||+|++++|+++|++|
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (525)
T 3fr7_A 411 KGHSYSEIINESVIESVDSLNPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVTVDKDAPINQDLISNFMSD 490 (525)
T ss_dssp TTCCHHHHHHHHTHHHHHTHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCCCCHHHHHHHHHC
T ss_pred cCCCHHHHhhhHHHHHHHhhhhhhhhhhhHHHHhhccHhhhcccccchHhHHHHHHHHhHHHhhcCCcchHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhhccCCcceeecCCCCCcchhhhhccC
Q 007987 547 PVHGAIEVCAQLRPTVDISVPPDADFVRPELRQGS 581 (582)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (582)
|||+||++|++|||+|||||.++++++|+++||++
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (525)
T 3fr7_A 491 PVHGAIEVCAELRPTVDISVPANADFVRPELRQSS 525 (525)
T ss_dssp THHHHHHHHHTTSCSSCCC----------------
T ss_pred hHHHHHHHHHhcCCCceEeecCCccchhhhhhccC
Confidence 99999999999999999999999999999999985
No 2
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=100.00 E-value=4.3e-94 Score=765.67 Aligned_cols=440 Identities=25% Similarity=0.359 Sum_probs=392.9
Q ss_pred ccccccchhhhhhhc-----cccccceeeeccccccccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEE
Q 007987 71 LLDFETSVFKKDMIS-----LADRDEYIVRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV 145 (582)
Q Consensus 71 ~~~~~~~~~~~~~~~-----~~~~~e~i~~~~r~~f~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViV 145 (582)
.|||||++||+|+.+ ||+++| |.+.++.|+| |||+|||||+||+|||+||||| |++|+|
T Consensus 2 ~ny~n~l~~~~~~~~~~~c~~m~~~e---------F~~~~~~lkg-K~IaVIGyGsQG~AqAlNLRDS------Gv~V~V 65 (491)
T 3ulk_A 2 ANYFNTLNLRQQLAQLGKCRFMGRDE---------FADGASYLQG-KKVVIVGCGAQGLNQGLNMRDS------GLDISY 65 (491)
T ss_dssp CCTGGGSCHHHHHHHHTCCEECCGGG---------GTTTTGGGTT-SEEEEESCSHHHHHHHHHHHHT------TCEEEE
T ss_pred cchhccccHHHHHHHhccceeccHHH---------hcchhHHHcC-CEEEEeCCChHhHHHHhHHHhc------CCcEEE
Confidence 499999999999987 777766 9999999999 9999999999999999999999 999999
Q ss_pred EecCC-----cccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecCchhhhhh
Q 007987 146 GLRKG-----SRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQ 220 (582)
Q Consensus 146 g~r~~-----sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~ 220 (582)
|+|++ ++||++|+++||. +.+++|++++||+|++++||+.|.++|++|.|+|++|++|.++|||+|++.
T Consensus 66 glr~~s~~e~~~S~~~A~~~Gf~-----v~~~~eA~~~ADvV~~L~PD~~q~~vy~~I~p~lk~G~~L~faHGFnI~~~- 139 (491)
T 3ulk_A 66 ALRKEAIAEKRASWRKATENGFK-----VGTYEELIPQADLVINLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEV- 139 (491)
T ss_dssp EECHHHHHTTCHHHHHHHHTTCE-----EEEHHHHGGGCSEEEECSCGGGHHHHHHHHGGGSCTTCEEEESSCHHHHTT-
T ss_pred EeCCCCcccccchHHHHHHCCCE-----ecCHHHHHHhCCEEEEeCChhhHHHHHHHHHhhCCCCCEEEecCccccccc-
Confidence 99954 4899999999999 579999999999999999999999999999999999999999999999874
Q ss_pred cccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeec--cCCCHHHHHHHHHHHHHhCCCc--cccccccc
Q 007987 221 SMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH--QDVDGRATNVALGWSVALGSPF--TFATTLEQ 296 (582)
Q Consensus 221 ~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~--qd~tgeale~alala~aiG~~~--~iettf~~ 296 (582)
++.||+|++||||+||+||+.||++|++| +|+|++|+|| ||++|+++++|++|+.++|++| +|+|||++
T Consensus 140 --~i~pp~dvdVimVAPKgpG~~VR~~y~~G-----~GvP~liAVhqeqD~sG~a~~~AlayA~aiG~~raGvieTTF~e 212 (491)
T 3ulk_A 140 --GEQIRKDITVVMVAPKCPGTEVREEYKRG-----FGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVA 212 (491)
T ss_dssp --CCCCCTTSEEEEEEESSCHHHHHHHHHTT-----CCCCEEEEECGGGCTTSCHHHHHHHHHHHHTGGGTCEEECCHHH
T ss_pred --ccccCCCcceEEeCCCCCcHHHHHHHHcC-----CCCceEEEEEeCCCCchhHHHHHHHHHHhcCCCcCceeeccHHH
Confidence 67899999999999999999999999994 8999999997 8999999999999999999985 89999999
Q ss_pred cccccchhhh-hhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCcchhhhhhhhhcc
Q 007987 297 EYRSDIFGER-ILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSA 375 (582)
Q Consensus 297 E~~sDlfgEq-vLsG~~pAlieAl~d~lVe~Gl~pe~Ay~~~~~ei~glia~lI~e~Gi~~m~d~vS~~~~aeyg~~~~~ 375 (582)
|+++|||||| +|||+++++++++||++|++||+|++||+++.+++ ++|+++|+++||.+|+++||| |++||.|...
T Consensus 213 EtetDLfGEQaVLcGgl~~li~agFetLveaGy~P~~a~~~~~~e~-klIvdli~egGi~~M~~siS~--TAe~G~~~~~ 289 (491)
T 3ulk_A 213 EVKSDLMGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGW-ETITEALKQGGITLMMDRLSN--PAKLRAYALS 289 (491)
T ss_dssp HHHHHHHHHHTTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHTSCH--HHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH-hHHHHHHHhCCHHHHHHhcCc--hhhccchhhh
Confidence 9999999999 99999999999999999999999999999999988 589999999999999999997 7789998543
Q ss_pred c-c-hhHHHHHHHHHHhccCChhhhHHHHhcccccccCCCCCCcchhhhcChHHHHHHHHHccCCC--CCCCCCCcchhH
Q 007987 376 S-Y-YPCMEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPA--GDLGPLHPFTAG 451 (582)
Q Consensus 376 ~-~-~p~~~~m~e~~~~I~sG~far~~i~e~~~~~~~~g~~~~~~~~i~~~~ie~vG~~lRa~~~~--~~~g~~~p~t~g 451 (582)
. . +.++++|+++|++|+||+|+|+|+.|++ .|.|.|+. ..|+.++..++.+|+ .+|+||+|||+|
T Consensus 290 ~~~~~~~k~~~~~~l~~I~sG~Fa~~~~~e~~-----~g~~~l~~------~R~~~~~h~iEk~~~~~~~I~~qe~f~~G 358 (491)
T 3ulk_A 290 EQLKEIMAPLFQKHMDDIISGEFSSGMMADWA-----NDDKKLLT------WREETGKTAFETAPQYEGKIGEQEYFDKG 358 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH-----TTTHHHHH------HHHHHHHSHHHHCCCCCSCCCHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHHHHhCCcchHHHHHHHH-----cCChhHHH------HHHHhcCCccccCcccccCCCcccchhhh
Confidence 2 2 4478889999999999999999999975 35565541 235666666666775 689999999999
Q ss_pred HHH-HHHHHHHHHHHHhCCChhhhhhhhH-HHHhhhcchhhh----hccchhhhhccchhhhccccccccchhHHHHHHH
Q 007987 452 VYA-ALMMAQIEILRKKGHSYSEIINESV-IESVDSLNPFMH----ARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQA 525 (582)
Q Consensus 452 v~~-~~~~a~~~~l~~~~~~~s~~~~e~~-~e~~~~l~p~~~----~~~~~~m~~~~s~ta~~g~~~~~~~~~~~~~~~~ 525 (582)
||| ++++|+||+ .+..+.-+++..|++ +|++|+| |||. .+|+++|+.+||+||+||.|.|.|+.++.+ +++
T Consensus 359 ilmva~v~a~ve~-~FEtlveaGy~pE~AYfE~LHEl-kLIvdli~e~gl~~M~~sISdTAEYG~yl~~~~~k~~m-k~~ 435 (491)
T 3ulk_A 359 VLMIAMVKAGVEL-AFETMVDSGIIEESAYYESLHEL-PLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLL-KPF 435 (491)
T ss_dssp HHHHHHHHHHHHH-HHHHHHTTTCCHHHHHHTTGGGH-HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT-HHH
T ss_pred hHHHHHHHHHHhh-hHHHHHHcCCcHHHHHHHHHhHH-HHHHHHHHHhhHHHHHhHhhhHhhhcCEEecHHHHHHH-HHH
Confidence 995 555599887 777778888888999 8999999 7755 499999999999999999999999999998 678
Q ss_pred HhhhcCC---Ccc---------chhHHHhhhcChHHHHHHHhhccC
Q 007987 526 LVAVDND---API---------NGDLISNFLSDPVHGAIEVCAQLR 559 (582)
Q Consensus 526 ~~~~~~~---~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 559 (582)
+..+++| +++ ...++++.++||++. |+.+||
T Consensus 436 l~~Iq~g~fak~~~e~~~g~~~l~~~~~~~~~H~IE~---VG~~LR 478 (491)
T 3ulk_A 436 MAELQPGDLGKAIPEGAVDNGQLRDVNEAIRSHAIEQ---VGKKLR 478 (491)
T ss_dssp HHTCCTTSSSSCCCCCCCCHHHHHHHHHHHHTSHHHH---HHHHHH
T ss_pred HHHccCChHhhhhhhccCCCHHHHHHHHHHhCCChhH---HHHHHH
Confidence 8888888 222 567788899999985 677776
No 3
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=100.00 E-value=1.5e-44 Score=374.64 Aligned_cols=309 Identities=28% Similarity=0.490 Sum_probs=269.6
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+++ ++|+|||+|+||+++|++|+++ |++|++++++.+++++.+.+.|+.. .+.+++++++|+||++
T Consensus 12 ~~l~~-~~I~IIG~G~mG~alA~~L~~~------G~~V~~~~~~~~~~~~~a~~~G~~~-----~~~~e~~~~aDvVila 79 (338)
T 1np3_A 12 SIIQG-KKVAIIGYGSQGHAHACNLKDS------GVDVTVGLRSGSATVAKAEAHGLKV-----ADVKTAVAAADVVMIL 79 (338)
T ss_dssp HHHHT-SCEEEECCSHHHHHHHHHHHHT------TCCEEEECCTTCHHHHHHHHTTCEE-----ECHHHHHHTCSEEEEC
T ss_pred chhcC-CEEEEECchHHHHHHHHHHHHC------cCEEEEEECChHHHHHHHHHCCCEE-----ccHHHHHhcCCEEEEe
Confidence 56788 8999999999999999999999 8888888887666678888899874 3888999999999999
Q ss_pred ccchhHHHHHH-HHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEe
Q 007987 186 ISDAAQADNYE-KIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (582)
Q Consensus 186 VPd~a~~~Vl~-eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliA 264 (582)
+|+..+.++++ ++.+++++|++|++++|+++ .... +.++.+++|+++||++|++.++++|+. |.|.+++++
T Consensus 80 vp~~~~~~v~~~~i~~~l~~~~ivi~~~gv~~-~~~~--~~~~~~~~vv~~~P~gp~~a~~~l~~~-----G~g~~~ii~ 151 (338)
T 1np3_A 80 TPDEFQGRLYKEEIEPNLKKGATLAFAHGFSI-HYNQ--VVPRADLDVIMIAPKAPGHTVRSEFVK-----GGGIPDLIA 151 (338)
T ss_dssp SCHHHHHHHHHHHTGGGCCTTCEEEESCCHHH-HTTS--SCCCTTCEEEEEEESSCSHHHHHHHHT-----TCCCCEEEE
T ss_pred CCcHHHHHHHHHHHHhhCCCCCEEEEcCCchh-HHHh--hcCCCCcEEEeccCCCCchhHHHHHhc-----cCCCeEEEE
Confidence 99999999998 99999999999999999987 4433 334678899999999999999999997 479999999
Q ss_pred eccCCCHHHHHHHHHHHHHhCCCc--cccccccccccccchhhh-hhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Q 007987 265 VHQDVDGRATNVALGWSVALGSPF--TFATTLEQEYRSDIFGER-ILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI 341 (582)
Q Consensus 265 v~qd~tgeale~alala~aiG~~~--~iettf~~E~~sDlfgEq-vLsG~~pAlieAl~d~lVe~Gl~pe~Ay~~~~~ei 341 (582)
++++.++++++.+++|++++|..+ ++.+++.+|++.|+|+++ +|||++|+++...++.+++.|++++.||++|+++.
T Consensus 152 ~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a~~e~~~~~ 231 (338)
T 1np3_A 152 IYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFECLHEL 231 (338)
T ss_dssp EEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTTH
T ss_pred ecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHhhhHH
Confidence 999999999999999999999855 888999999999999999 99999999999999999999999999999999987
Q ss_pred HHHHHHHHHHhcHHHHHHhcCcchhhhhhhhhccc-c--hhHHHHHHHHHHhccCChhhhHHHHhcccccccCCCCCCc-
Q 007987 342 TGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSAS-Y--YPCMEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFP- 417 (582)
Q Consensus 342 ~glia~lI~e~Gi~~m~d~vS~~~~aeyg~~~~~~-~--~p~~~~m~e~~~~I~sG~far~~i~e~~~~~~~~g~~~~~- 417 (582)
.++.++|..+|+..|+...|+ .++|++.+... . ...++.|+++++.|++|+|.++|+.+++ .+++.|.
T Consensus 232 -~~~~~~~~~gg~~~~r~a~s~--p~~~~d~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~-----~~r~~~~~ 303 (338)
T 1np3_A 232 -KLIVDLMYEGGIANMNYSISN--NAEYGEYVTGPEVINAESRAAMRNALKRIQDGEYAKMFITEGA-----ANYPSMTA 303 (338)
T ss_dssp -HHHHHHHHHHHHHHHHHHSCH--HHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTHHHHHHHHHHH-----TTSHHHHH
T ss_pred -HHHHHHHHhcCHHHHHHhcCC--HHHHhhhhcCCccccHHHHHHHHHHHHHHhCCHHHHHHHHHHh-----cccHHHHH
Confidence 479999999999888655564 67899975331 1 4568899999999999999999999865 4567666
Q ss_pred ch-hhhcChHHHHHHHHHccCCCCCC
Q 007987 418 MG-KIDQTRMWKVGERVRSTRPAGDL 442 (582)
Q Consensus 418 ~~-~i~~~~ie~vG~~lRa~~~~~~~ 442 (582)
+. ++++|+||+||++||++|||++.
T Consensus 304 ~~~~~~~~~~~~~g~~~r~~~~~~~~ 329 (338)
T 1np3_A 304 YRRNNAAHPIEQIGEKLRAMMPWIAA 329 (338)
T ss_dssp HHHHHHHSHHHHHHHHHHTTCTTC--
T ss_pred HHHHHhCCcHHHHHHHHHHhCccccc
Confidence 33 55899999999999999999874
No 4
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.96 E-value=3.9e-29 Score=252.61 Aligned_cols=220 Identities=15% Similarity=0.136 Sum_probs=187.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc---eEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~---~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd 188 (582)
+||+|||+|+||.+++++|.++ |+ +|++.+++..+..+.+.+.|+.. ..++.++++++|+||+++||
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~------g~~~~~V~v~dr~~~~~~~l~~~~gi~~----~~~~~~~~~~aDvVilav~p 73 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIAN------GYDPNRICVTNRSLDKLDFFKEKCGVHT----TQDNRQGALNADVVVLAVKP 73 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHT------TCCGGGEEEECSSSHHHHHHHHTTCCEE----ESCHHHHHSSCSEEEECSCG
T ss_pred CEEEEEcccHHHHHHHHHHHHC------CCCCCeEEEEeCCHHHHHHHHHHcCCEE----eCChHHHHhcCCeEEEEeCH
Confidence 7899999999999999999998 87 78887776555444444458875 56889999999999999999
Q ss_pred hhHHHHHHHHHhc-CCCCcE-EEEecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeec
Q 007987 189 AAQADNYEKIFSC-MKPNSI-LGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (582)
Q Consensus 189 ~a~~~Vl~eI~~~-Lk~Gai-L~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~ 266 (582)
+...+++++|.++ ++++++ |++++|+++..+++ .++.+.+|+++|||+|... |+|++. +++.
T Consensus 74 ~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~---~l~~~~~vvr~mPn~p~~v------------~~g~~~-l~~~ 137 (280)
T 3tri_A 74 HQIKMVCEELKDILSETKILVISLAVGVTTPLIEK---WLGKASRIVRAMPNTPSSV------------RAGATG-LFAN 137 (280)
T ss_dssp GGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHH---HHTCCSSEEEEECCGGGGG------------TCEEEE-EECC
T ss_pred HHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHH---HcCCCCeEEEEecCChHHh------------cCccEE-EEeC
Confidence 9999999999998 888865 56889999888766 5566789999999999988 678887 5668
Q ss_pred cCCCHHHHHHHHHHHHHhCCCcccccccc-ccccccchhhhhhhchHHHH----HHHHHHHHHHcCCCHHHHHHHHHHHH
Q 007987 267 QDVDGRATNVALGWSVALGSPFTFATTLE-QEYRSDIFGERILLGAVHGI----VESLFRRFTENGMNEDLAYKNTVECI 341 (582)
Q Consensus 267 qd~tgeale~alala~aiG~~~~iettf~-~E~~sDlfgEqvLsG~~pAl----ieAl~d~lVe~Gl~pe~Ay~~~~~ei 341 (582)
.++++++++.++.+++++|.. ... +|...|.++ .|+|++|+| +|++.|.+++.|++|++|++++.|++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~-----~~v~~E~~~d~~t--alsgsgpa~~~~~~eal~~a~v~~Gl~~~~a~~l~~~t~ 210 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLV-----IWVSSEDQIEKIA--ALSGSGPAYIFLIMEALQEAAEQLGLTKETAELLTEQTV 210 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEE-----EECSSHHHHHHHH--HHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCe-----EEECCHHHhhHHH--HHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 889999999999999999974 222 455666666 699999996 69999999999999999999999999
Q ss_pred HHHHHHHHHHhcH--HHHHHhcCcch
Q 007987 342 TGIISKIISTQGM--LAVYNSFSGED 365 (582)
Q Consensus 342 ~glia~lI~e~Gi--~~m~d~vS~~~ 365 (582)
.| .++|+.++|. ..+++.|+.+.
T Consensus 211 ~G-~a~~~~~~~~~p~~l~~~v~spg 235 (280)
T 3tri_A 211 LG-AARMALETEQSVVQLRQFVTSPG 235 (280)
T ss_dssp HH-HHHHHHTCSSCHHHHHHHHCCTT
T ss_pred HH-HHHHHHhcCCCHHHHHHhccCCC
Confidence 98 9999999986 88889988753
No 5
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.94 E-value=6.8e-27 Score=230.27 Aligned_cols=220 Identities=20% Similarity=0.288 Sum_probs=171.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc----eEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI----VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~----~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVP 187 (582)
+||+|||+|+||.+++++|.++ |+ +|++.+|+..+..+.+.+.|+.. ..++.++++++|+||+++|
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~------g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVilav~ 72 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINK------NIVSSNQIICSDLNTANLKNASEKYGLTT----TTDNNEVAKNADILILSIK 72 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSCHHHHHHHCSEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhC------CCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCChHHHHHhCCEEEEEeC
Confidence 7899999999999999999998 87 88777765444333344568875 5788999999999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEE-EEecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeec
Q 007987 188 DAAQADNYEKIFSCMKPNSIL-GLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL-~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~ 266 (582)
|+...++++++.++++++++| ++++|+.+..+++ .++.+.+++++||+.|... |+|... +++.
T Consensus 73 ~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~------------~~g~~~-~~~~ 136 (247)
T 3gt0_A 73 PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTEN---AFNKKVKVVRVMPNTPALV------------GEGMSA-LCPN 136 (247)
T ss_dssp TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHH---HHCSCCEEEEEECCGGGGG------------TCEEEE-EEEC
T ss_pred HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHH---HhCCCCcEEEEeCChHHHH------------cCceEE-EEeC
Confidence 999999999999999999865 5889998877755 4556789999999999987 567766 6667
Q ss_pred cCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHH----HHHHHHHHHHcCCCHHHHHHHHHHHHH
Q 007987 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGI----VESLFRRFTENGMNEDLAYKNTVECIT 342 (582)
Q Consensus 267 qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAl----ieAl~d~lVe~Gl~pe~Ay~~~~~ei~ 342 (582)
...+.++++.++.+++.+|.. ....|...|.+. .++|++|++ +|++.+.+++.|++++.|++...+++.
T Consensus 137 ~~~~~~~~~~~~~l~~~~G~~-----~~~~e~~~d~~~--a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~~ 209 (247)
T 3gt0_A 137 EMVTEKDLEDVLNIFNSFGQT-----EIVSEKLMDVVT--SVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAVL 209 (247)
T ss_dssp TTCCHHHHHHHHHHHGGGEEE-----EECCGGGHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCE-----EEeCHHHccHHH--HHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 778999999999999999973 223445555554 689999985 789999999999999999999999998
Q ss_pred HHHHHHHHHhcH--HHHHHhcCcch
Q 007987 343 GIISKIISTQGM--LAVYNSFSGED 365 (582)
Q Consensus 343 glia~lI~e~Gi--~~m~d~vS~~~ 365 (582)
| .++++.++|. ..|+++|+.+.
T Consensus 210 g-s~~~~~~~~~~p~~l~~~v~spg 233 (247)
T 3gt0_A 210 G-SAKMVLETGIHPGELKDMVCSPG 233 (247)
T ss_dssp H-HHHHHHHSCC-------------
T ss_pred H-HHHHHHHcCCCHHHHHHhcCCCC
Confidence 8 8999999997 88999998654
No 6
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=99.89 E-value=9.1e-25 Score=233.61 Aligned_cols=128 Identities=17% Similarity=0.317 Sum_probs=111.2
Q ss_pred hhhhh-hhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCcchhhhhhhhhcccchhHH
Q 007987 303 FGERI-LLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCM 381 (582)
Q Consensus 303 fgEqv-LsG~~pAlieAl~d~lVe~Gl~pe~Ay~~~~~ei~glia~lI~e~Gi~~m~d~vS~~~~aeyg~~~~~~~~p~~ 381 (582)
|+..+ ++.++.|+||++||++|++||+||.||+||+||+ +||+++|+++|+++|+.+||| |||||+|... ..++
T Consensus 355 f~~Gilmva~v~a~ve~~FEtlveaGy~pE~AYfE~LHEl-kLIvdli~e~gl~~M~~sISd--TAEYG~yl~~--~~~k 429 (491)
T 3ulk_A 355 FDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLHEL-PLIANTIARKRLYEMNVVISD--TAEYGNYLFS--YACV 429 (491)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHTTGGGH-HHHHHHHHHHHHHHHHHHSCH--HHHHHHHHHH--HHHH
T ss_pred hhhhhHHHHHHHHHHhhhHHHHHHcCCcHHHHHHHHHhHH-HHHHHHHHHhhHHHHHhHhhh--HhhhcCEEec--HHHH
Confidence 44334 4788999999999999999999999999999999 599999999999999999997 8899999321 4467
Q ss_pred HHHHHHHHhccCChhhhHHHHhcccccccCCCCCCc--chhhhcChHHHHHHHHHccCCCCC
Q 007987 382 EILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFP--MGKIDQTRMWKVGERVRSTRPAGD 441 (582)
Q Consensus 382 ~~m~e~~~~I~sG~far~~i~e~~~~~~~~g~~~~~--~~~i~~~~ie~vG~~lRa~~~~~~ 441 (582)
..|++++++||+|.|+|++ .+++ .|.|.|+ ++++++|+||+||++||++|||+|
T Consensus 430 ~~mk~~l~~Iq~g~fak~~-~e~~-----~g~~~l~~~~~~~~~H~IE~VG~~LR~~M~wmk 485 (491)
T 3ulk_A 430 PLLKPFMAELQPGDLGKAI-PEGA-----VDNGQLRDVNEAIRSHAIEQVGKKLRGYMTDMK 485 (491)
T ss_dssp HHTHHHHHTCCTTSSSSCC-CCCC-----CCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChHhhhh-hhcc-----CCCHHHHHHHHHHhCCChhHHHHHHHHhhHHHH
Confidence 7999999999999999994 5654 4667776 457799999999999999999987
No 7
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.88 E-value=1.7e-21 Score=199.84 Aligned_cols=217 Identities=15% Similarity=0.139 Sum_probs=169.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCC----ceEEEEecCCc-ccHHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G----~~ViVg~r~~s-ks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
++|+|||+|+||.++|.+|.++ | ++|++.+|+.. ...+...+.|+.. ..+..++++++|+||++|
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~------G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~----~~~~~e~~~~aDvVilav 92 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAA------GVLAAHKIMASSPDMDLATVSALRKMGVKL----TPHNKETVQHSDVLFLAV 92 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHT------TSSCGGGEEEECSCTTSHHHHHHHHHTCEE----ESCHHHHHHHCSEEEECS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCCcceEEEECCCccHHHHHHHHHcCCEE----eCChHHHhccCCEEEEEe
Confidence 7899999999999999999998 8 67877766543 2455556778875 467889999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEe-cCchhhhhhcccccCC---CCCcEEEeccCCChhhHHHHHhhcccccCCCceEE
Q 007987 187 SDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFP---KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSS 262 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~~a-~G~~i~~~~~~~i~~p---~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~al 262 (582)
||+...+++++|.+.++++++|++. .|+.+..+.+ .++ .+.+|++.||++|... +.|...
T Consensus 93 ~~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~---~l~~~~~~~~vv~~~p~~p~~~------------~~g~~v- 156 (322)
T 2izz_A 93 KPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEK---KLSAFRPAPRVIRCMTNTPVVV------------REGATV- 156 (322)
T ss_dssp CGGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHH---HHHTTSSCCEEEEEECCGGGGG------------TCEEEE-
T ss_pred CHHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHH---HHhhcCCCCeEEEEeCCcHHHH------------cCCeEE-
Confidence 9999999999999999999887654 6887654433 121 2468999999999877 456644
Q ss_pred EeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh-hhhchHHHH----HHHHHHHHHHcCCCHHHHHHHH
Q 007987 263 FAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER-ILLGAVHGI----VESLFRRFTENGMNEDLAYKNT 337 (582)
Q Consensus 263 iAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq-vLsG~~pAl----ieAl~d~lVe~Gl~pe~Ay~~~ 337 (582)
++...+.+.+..+.+..++..+|.. ....| |.++.. .++|++|++ ++++.+.+++.|++++.++...
T Consensus 157 ~~~g~~~~~~~~~~v~~ll~~~G~~-----~~~~e---~~~~~~~a~~g~gpa~~~~~~eala~a~~~~Gl~~~~a~~l~ 228 (322)
T 2izz_A 157 YATGTHAQVEDGRLMEQLLSSVGFC-----TEVEE---DLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLG 228 (322)
T ss_dssp EEECTTCCHHHHHHHHHHHHTTEEE-----EECCG---GGHHHHHHHTTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHhCCCE-----EEeCH---HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 5556677889999999999999963 11223 344444 688998885 8899999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcH--HHHHHhcCc
Q 007987 338 VECITGIISKIISTQGM--LAVYNSFSG 363 (582)
Q Consensus 338 ~~ei~glia~lI~e~Gi--~~m~d~vS~ 363 (582)
.+++.| .++++.+.|. ..+++.++.
T Consensus 229 ~~~~~g-~~~~~~~~~~~p~~l~~~v~s 255 (322)
T 2izz_A 229 AQALLG-AAKMLLHSEQHPGQLKDNVSS 255 (322)
T ss_dssp HHHHHH-HHHHHHHCSSCHHHHHHHHCC
T ss_pred HHHHHH-HHHHHHhcCCCHHHHHHhCCC
Confidence 999987 6777777654 567777754
No 8
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.84 E-value=1.1e-19 Score=178.68 Aligned_cols=201 Identities=15% Similarity=0.218 Sum_probs=155.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCC----ceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD----IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G----~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVP 187 (582)
++|+|||+|+||.+++.+|.++ | ++|.+.+++..+ .|+.. ..+..++++++|+||+++|
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~------g~~~~~~v~~~~~~~~~-------~g~~~----~~~~~~~~~~~D~vi~~v~ 67 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANA------NIIKKENLFYYGPSKKN-------TTLNY----MSSNEELARHCDIIVCAVK 67 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH------TSSCGGGEEEECSSCCS-------SSSEE----CSCHHHHHHHCSEEEECSC
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCCCCCeEEEEeCCccc-------CceEE----eCCHHHHHhcCCEEEEEeC
Confidence 6899999999999999999998 8 578777665433 57764 5678899999999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeecc
Q 007987 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~q 267 (582)
++...++++++.++++++.+|+++.|+....+.+ .++.+.++++++|+.|... +.| ...++...
T Consensus 68 ~~~~~~v~~~l~~~l~~~~vv~~~~gi~~~~l~~---~~~~~~~~v~~~p~~p~~~------------~~g-~~~~~~~~ 131 (262)
T 2rcy_A 68 PDIAGSVLNNIKPYLSSKLLISICGGLNIGKLEE---MVGSENKIVWVMPNTPCLV------------GEG-SFIYCSNK 131 (262)
T ss_dssp TTTHHHHHHHSGGGCTTCEEEECCSSCCHHHHHH---HHCTTSEEEEEECCGGGGG------------TCE-EEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHH---HhCCCCcEEEECCChHHHH------------cCC-eEEEEeCC
Confidence 9999999999999885555677889998776654 3455567889999988876 578 55567676
Q ss_pred CCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHH----HHHHHHHHHHcCCCHHHHHHHHHHHHHH
Q 007987 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGI----VESLFRRFTENGMNEDLAYKNTVECITG 343 (582)
Q Consensus 268 d~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAl----ieAl~d~lVe~Gl~pe~Ay~~~~~ei~g 343 (582)
+.+.+..+.+..++..+|.. +. ..+...|.+. .++|+.|++ ++++.+.+++.|++++.++....+.+.+
T Consensus 132 ~~~~~~~~~~~~ll~~~G~~--~~---~~~~~~~~~~--a~~~~~~~~~~~~~~al~~~~~~~Gl~~~~~~~~~~~~~~~ 204 (262)
T 2rcy_A 132 NVNSTDKKYVNDIFNSCGII--HE---IKEKDMDIAT--AISGCGPAYVYLFIESLIDAGVKNGLSRELSKNLVLQTIKG 204 (262)
T ss_dssp TCCHHHHHHHHHHHHTSEEE--EE---CCGGGHHHHH--HHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCCE--EE---eCHHHccHHH--HHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 77889999999999999952 11 1222233333 678877764 7888888999999999999998888766
Q ss_pred HHHHHHHHhc
Q 007987 344 IISKIISTQG 353 (582)
Q Consensus 344 lia~lI~e~G 353 (582)
..++..+.+
T Consensus 205 -~~~~~~~~~ 213 (262)
T 2rcy_A 205 -SVEMVKKSD 213 (262)
T ss_dssp -HHHHHHHCS
T ss_pred -HHHHHHhcC
Confidence 555555433
No 9
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.83 E-value=1.6e-19 Score=177.88 Aligned_cols=215 Identities=17% Similarity=0.153 Sum_probs=161.1
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
+++|+|||+|.||.+++.+|.+. |.+|.+.+++..+..+.+.+.|+.. ..+++++++++|+||+++|++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~------g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~D~Vi~~v~~~~ 72 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT------PHELIISGSSLERSKEIAEQLALPY----AMSHQDLIDQVDLVILGIKPQL 72 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS------SCEEEEECSSHHHHHHHHHHHTCCB----CSSHHHHHHTCSEEEECSCGGG
T ss_pred ccEEEEECCCHHHHHHHHHHHhC------CCeEEEECCCHHHHHHHHHHcCCEe----eCCHHHHHhcCCEEEEEeCcHh
Confidence 47999999999999999999988 8877766665433333333458764 5688899999999999999988
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-cCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeeccCC
Q 007987 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (582)
Q Consensus 191 ~~~Vl~eI~~~Lk~GaiL~~a-~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~ 269 (582)
+.+++.++ ++|++|+.. .|+....+.+ .++.+.++++.+|+.|... +.|... +.+....
T Consensus 73 ~~~v~~~l----~~~~~vv~~~~~~~~~~l~~---~~~~~~~~v~~~p~~~~~~------------~~g~~~-i~~~~~~ 132 (259)
T 2ahr_A 73 FETVLKPL----HFKQPIISMAAGISLQRLAT---FVGQDLPLLRIMPNMNAQI------------LQSSTA-LTGNALV 132 (259)
T ss_dssp HHHHHTTS----CCCSCEEECCTTCCHHHHHH---HHCTTSCEEEEECCGGGGG------------TCEEEE-EEECTTC
T ss_pred HHHHHHHh----ccCCEEEEeCCCCCHHHHHH---hcCCCCCEEEEcCCchHHH------------cCceEE-EEcCCCC
Confidence 77777654 477776654 6887766654 3445678999999988876 467555 5566667
Q ss_pred CHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHH----HHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Q 007987 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGI----VESLFRRFTENGMNEDLAYKNTVECITGII 345 (582)
Q Consensus 270 tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAl----ieAl~d~lVe~Gl~pe~Ay~~~~~ei~gli 345 (582)
+.+..+.+..++..+|. ++. ..+.+.|.+. .|+|+.|++ ++++.+.+++.|++++.++....+.+.+ .
T Consensus 133 ~~~~~~~~~~ll~~~G~--~~~---~~~~~~d~~~--al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~~~~~~~-~ 204 (259)
T 2ahr_A 133 SQELQARVRDLTDSFGS--TFD---ISEKDFDTFT--ALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIVTQTVLA-S 204 (259)
T ss_dssp CHHHHHHHHHHHHTTEE--EEE---CCGGGHHHHH--HHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHhCCC--EEE---ecHHHccHHH--HHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-H
Confidence 88999999999999993 222 2233334333 678877774 7899999999999999999999999877 7
Q ss_pred HHHHHHhc--HHHHHHhcCc
Q 007987 346 SKIISTQG--MLAVYNSFSG 363 (582)
Q Consensus 346 a~lI~e~G--i~~m~d~vS~ 363 (582)
++++.+.| ...+++.++.
T Consensus 205 ~~~~~~~~~~p~~l~~~~~~ 224 (259)
T 2ahr_A 205 ASNLKTSSQSPHDFIDAICS 224 (259)
T ss_dssp HHHHHHSSSCHHHHHHHHCC
T ss_pred HHHHHhcCCCHHHHHHhCCC
Confidence 77887777 4555566643
No 10
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.83 E-value=2e-19 Score=176.96 Aligned_cols=214 Identities=13% Similarity=0.178 Sum_probs=163.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCC-ceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G-~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
++|+|||+|+||.+++.+|.+. | ++|.+.+++..+..+.+...|+.. ..+..+++ ++|+||+++|+..
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~r~~~~~~~~~~~~g~~~----~~~~~~~~-~~D~vi~~v~~~~ 69 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ------GGYRIYIANRGAEKRERLEKELGVET----SATLPELH-SDDVLILAVKPQD 69 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCEEEEECSSHHHHHHHHHHTCCEE----ESSCCCCC-TTSEEEECSCHHH
T ss_pred CEEEEECchHHHHHHHHHHHHC------CCCeEEEECCCHHHHHHHHHhcCCEE----eCCHHHHh-cCCEEEEEeCchh
Confidence 4899999999999999999998 8 888777665433333333458774 45677888 9999999999888
Q ss_pred HHHHHHHHHhcCCCCcEEEEe-cCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeeccCC
Q 007987 191 QADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (582)
Q Consensus 191 ~~~Vl~eI~~~Lk~GaiL~~a-~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~ 269 (582)
..++++++.+ + +++|++. +|+....+.+ .++.+.++++.+|+.|... +.|... +.+..+.
T Consensus 70 ~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~---~~~~~~~~v~~~~~~~~~~------------~~g~~~-i~~~~~~ 130 (263)
T 1yqg_A 70 MEAACKNIRT--N-GALVLSVAAGLSVGTLSR---YLGGTRRIVRVMPNTPGKI------------GLGVSG-MYAEAEV 130 (263)
T ss_dssp HHHHHTTCCC--T-TCEEEECCTTCCHHHHHH---HTTSCCCEEEEECCGGGGG------------TCEEEE-EECCTTS
T ss_pred HHHHHHHhcc--C-CCEEEEecCCCCHHHHHH---HcCCCCcEEEEcCCHHHHH------------cCceEE-EEcCCCC
Confidence 8888887766 5 7877766 7887766654 4556678999999988776 467776 5556666
Q ss_pred CHHHHHHHHHHHHHhCCCccccccccccccccchhhh-hhhchHHHH----HHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Q 007987 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER-ILLGAVHGI----VESLFRRFTENGMNEDLAYKNTVECITGI 344 (582)
Q Consensus 270 tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq-vLsG~~pAl----ieAl~d~lVe~Gl~pe~Ay~~~~~ei~gl 344 (582)
+.+..+.+..++..+|.. . ... +.|.++.. +++|+.|++ ++++.+.+++.|++++.++..+.+...+
T Consensus 131 ~~~~~~~~~~l~~~~g~~----~-~~~--~~~~~~~~~al~g~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~~~~~~~- 202 (263)
T 1yqg_A 131 SETDRRIADRIMKSVGLT----V-WLD--DEEKMHGITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKG- 202 (263)
T ss_dssp CHHHHHHHHHHHHTTEEE----E-ECS--STTHHHHHHHHTTSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHhCCCE----E-EeC--ChhhccHHHHHHccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-
Confidence 889999999999999963 1 111 13345544 688888875 7777888999999999999999999877
Q ss_pred HHHHHHHhc--HHHHHHhcCc
Q 007987 345 ISKIISTQG--MLAVYNSFSG 363 (582)
Q Consensus 345 ia~lI~e~G--i~~m~d~vS~ 363 (582)
.++++.++| ...+.+.++.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~ 223 (263)
T 1yqg_A 203 AVALAEQTGEDFEKLQKNVTS 223 (263)
T ss_dssp HHHHHHHHCCCHHHHHHHTCC
T ss_pred HHHHHHhcCCCHHHHHHhcCC
Confidence 788888888 5667777664
No 11
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.79 E-value=2.1e-18 Score=172.95 Aligned_cols=209 Identities=13% Similarity=0.072 Sum_probs=151.0
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch
Q 007987 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (582)
Q Consensus 111 ikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~ 189 (582)
|++|+|||+ |+||.+++.+|.+. |++|++.+++ ....+.+.+.|+. ..+..++++++|+||+++|++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~------g~~V~~~~r~-~~~~~~~~~~g~~-----~~~~~~~~~~aDvVi~av~~~ 78 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS------AHHLAAIEIA-PEGRDRLQGMGIP-----LTDGDGWIDEADVVVLALPDN 78 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS------SSEEEEECCS-HHHHHHHHHTTCC-----CCCSSGGGGTCSEEEECSCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHhcCCC-----cCCHHHHhcCCCEEEEcCCch
Confidence 379999999 99999999999998 9988766654 3334555557765 346778899999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEEe-cCchhhhhhcccccCCCCCcEEEeccCCChhhH----HHHHhhcccccCCC------
Q 007987 190 AQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV----RRLYVQGKEINGAG------ 258 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~GaiL~~a-~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~v----R~ly~~G~e~~G~G------ 258 (582)
...++++++.+.++++++|++. .|..+..+.+ . .++.+|++.||+.|+... ... +.|
T Consensus 79 ~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~---~-~~~~~~v~~~P~~~~~~~~~~~~~~--------~~g~l~~~~ 146 (286)
T 3c24_A 79 IIEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP---E-RADITYFIGHPCHPPLFNDETDPAA--------RTDYHGGIA 146 (286)
T ss_dssp HHHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC---C-CTTSEEEEEEECCSCSSCCCCSHHH--------HTCSSSSSS
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCchhHHHHh---h-hCCCeEEecCCCCccccccccchhh--------ccCcccccc
Confidence 9999999999999999987754 4555554432 2 346899999999987710 001 245
Q ss_pred -ceEEEeeccCCCHHHHHHHHHHHHHhCCC--ccccccccccccccchhhhhhh-chHHH----HHHHHHHHHHHcCCCH
Q 007987 259 -INSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTLEQEYRSDIFGERILL-GAVHG----IVESLFRRFTENGMNE 330 (582)
Q Consensus 259 -v~aliAv~qd~tgeale~alala~aiG~~--~~iettf~~E~~sDlfgEqvLs-G~~pA----lieAl~d~lVe~Gl~p 330 (582)
.+.+++ ....+++..+.+..+++.+|.+ +++.. .+...|.++- .++ |+.++ ++|++.+.+++.|+++
T Consensus 147 ~~~~i~~-~~~~~~~~~~~v~~l~~~~G~~~~~~~~v---~~~~~~~~~~-a~~n~~~~~~~~~~~eal~~~~~~~Gl~~ 221 (286)
T 3c24_A 147 KQAIVCA-LMQGPEEHYAIGADICETMWSPVTRTHRV---TTEQLAILEP-GLSEMVAMPFVETMVHAVDECADRYGIDR 221 (286)
T ss_dssp CEEEEEE-EEESCTHHHHHHHHHHHHHTCSEEEEEEC---CHHHHHHHTT-HHHHTTHHHHHHHHHHHHHHHHHHHCCCH
T ss_pred cceeeee-ccCCCHHHHHHHHHHHHHhcCCcceEEEe---ChhHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 344333 2235778999999999999972 12222 2445666632 233 34444 5888888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 007987 331 DLAYKNTVECITGIISKII 349 (582)
Q Consensus 331 e~Ay~~~~~ei~glia~lI 349 (582)
+.++..+.+.+.+ .++++
T Consensus 222 ~~~~~~~~~~~~~-~~~~~ 239 (286)
T 3c24_A 222 QAALDFMIGHLNV-EIAMW 239 (286)
T ss_dssp HHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHH-HHHHH
Confidence 9999999988876 45444
No 12
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.76 E-value=2.5e-18 Score=171.91 Aligned_cols=215 Identities=13% Similarity=0.078 Sum_probs=153.8
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
+++|+|||+|+||.+++.+|.+. |.|++|++.+++ ....+.+.+.|.. +....+++++++++|+||+++|++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~----g~~~~V~~~d~~-~~~~~~~~~~g~~--~~~~~~~~~~~~~aDvVilavp~~~ 78 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRD----HPHYKIVGYNRS-DRSRDIALERGIV--DEATADFKVFAALADVIILAVPIKK 78 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH----CTTSEEEEECSS-HHHHHHHHHTTSC--SEEESCTTTTGGGCSEEEECSCHHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhC----CCCcEEEEEcCC-HHHHHHHHHcCCc--ccccCCHHHhhcCCCEEEEcCCHHH
Confidence 37999999999999999999887 334577655543 4445566667763 1114577788999999999999999
Q ss_pred HHHHHHHHHhc-CCCCcEEEEecCchh---hhhhcccccCCC-CCcEEEeccC------CChhhHHHHHhhcccccCCCc
Q 007987 191 QADNYEKIFSC-MKPNSILGLSHGFLL---GHLQSMGLDFPK-NIGVIAVCPK------GMGPSVRRLYVQGKEINGAGI 259 (582)
Q Consensus 191 ~~~Vl~eI~~~-Lk~GaiL~~a~G~~i---~~~~~~~i~~p~-dv~VI~v~Pn------gpg~~vR~ly~~G~e~~G~Gv 259 (582)
..++++++.++ ++++++|+++++... ..+.+ .++. +++++..||. +|+....++ ..|.
T Consensus 79 ~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~---~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l--------~~g~ 147 (290)
T 3b1f_A 79 TIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEY---YLKDKPVQFVGSHPMAGSHKSGAVAANVNL--------FENA 147 (290)
T ss_dssp HHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHH---HHTTSSCEEEEEEEC-----CCTTSCCTTT--------TTTS
T ss_pred HHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHH---hccccCCEEEEeCCcCCCCcchHHHhhHHH--------hCCC
Confidence 99999999999 999999988877654 33333 2343 6788888887 555442222 2467
Q ss_pred eEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Q 007987 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIVESLFRRFTENGMNEDLAYKNTVE 339 (582)
Q Consensus 260 ~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAlieAl~d~lVe~Gl~pe~Ay~~~~~ 339 (582)
+..++++...+++..+.+..++..+|.. ++.++ +.+.|.... .++++.|.+.-++.+.+...|++++.++.++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~v~~l~~~~G~~-~~~~~---~~~~d~~~a-~~s~~~~~~a~~~~~~~~~~g~~~~~~~~la~~ 222 (290)
T 3b1f_A 148 YYIFSPSCLTKPNTIPALQDLLSGLHAR-YVEID---AAEHDCVTS-QISHFPHIIASSLMKQAGDFSESHEMTKHFAAG 222 (290)
T ss_dssp EEEEEECTTCCTTHHHHHHHHTGGGCCE-EEECC---HHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHCTHHHHHCCH
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHcCCE-EEEcC---HHHHHHHHH-HHhhHHHHHHHHHHHHHHhcccchhhHHhhccc
Confidence 7778888877889999999999999974 22222 223343322 467777776556666666678888899999888
Q ss_pred HHHHHHHHHH
Q 007987 340 CITGIISKII 349 (582)
Q Consensus 340 ei~glia~lI 349 (582)
.+.+ ++++.
T Consensus 223 ~~~~-~~rla 231 (290)
T 3b1f_A 223 GFRD-MTRIA 231 (290)
T ss_dssp HHHH-TTGGG
T ss_pred cHHh-hhhhh
Confidence 8865 44444
No 13
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.75 E-value=2.5e-18 Score=176.75 Aligned_cols=207 Identities=13% Similarity=0.014 Sum_probs=150.3
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHHcCceecCCCcCCHHh-hhccCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE-TISGSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~E-av~~ADIVILaVPd 188 (582)
+||+|||+|+||.++|++|+++ |+ +|++.++ +....+.+.+.|+. +....++++ +++++|+||+++|+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~------G~~~~V~~~dr-~~~~~~~a~~~G~~--~~~~~~~~~~~~~~aDvVilavp~ 104 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDI-NPESISKAVDLGII--DEGTTSIAKVEDFSPDFVMLSSPV 104 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECS-CHHHHHHHHHTTSC--SEEESCTTGGGGGCCSEEEECSCG
T ss_pred CEEEEEeeCHHHHHHHHHHHhC------CCCCEEEEEEC-CHHHHHHHHHCCCc--chhcCCHHHHhhccCCEEEEeCCH
Confidence 7999999999999999999999 88 7766554 44557778888874 222467788 89999999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEecCch---hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEee
Q 007987 189 AAQADNYEKIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~~a~G~~---i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv 265 (582)
+...++++++.++++++++|+++++.+ +..+.+ .+|. ++|..||...... ..+.........|.++++++
T Consensus 105 ~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~---~l~~--~~v~~hPm~G~e~--sG~~~A~~~Lf~g~~~il~~ 177 (314)
T 3ggo_A 105 RTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIAGTEK--SGVEYSLDNLYEGKKVILTP 177 (314)
T ss_dssp GGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEECCCCCC--CSGGGCCTTTTTTCEEEECC
T ss_pred HHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHH---hcCC--CEEecCcccCCcc--cchhhhhhhhhcCCEEEEEe
Confidence 999999999999999999999988775 333333 2333 8999999653211 00111111223577888998
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHH-HHHHHHHHHcCCCHHHHHHHHHHH
Q 007987 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIV-ESLFRRFTENGMNEDLAYKNTVEC 340 (582)
Q Consensus 266 ~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAli-eAl~d~lVe~Gl~pe~Ay~~~~~e 340 (582)
++..++++++.++.+++.+|.. ++. ..+.+.|.+. .+.+.+|.++ -++.+.+.+.+.+++.+..++...
T Consensus 178 ~~~~~~~~~~~v~~l~~~~G~~-v~~---~~~~~hD~~~--a~~s~lph~~a~~l~~~~~~~~~~~~~~~~~a~~~ 247 (314)
T 3ggo_A 178 TKKTDKKRLKLVKRVWEDVGGV-VEY---MSPELHDYVF--GVVSHLPHAVAFALVDTLIHMSTPEVDLFKYPGGG 247 (314)
T ss_dssp CTTSCHHHHHHHHHHHHHTTCE-EEE---CCHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHCCSSCCGGGCCTTT
T ss_pred CCCCCHHHHHHHHHHHHHcCCE-EEE---cCHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCcchHHHHhhcccc
Confidence 8888999999999999999973 222 2233444444 5788999975 566677777777666666554443
No 14
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.75 E-value=2.3e-18 Score=171.49 Aligned_cols=210 Identities=13% Similarity=0.058 Sum_probs=151.2
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc-cCCeEEEecc
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLIS 187 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~-~ADIVILaVP 187 (582)
|++|+|||+|+||.+++++|++. |+ +|++.+++ .+..+.+.+.|+.. ....+++++++ ++|+||+++|
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~------g~~~~V~~~d~~-~~~~~~~~~~g~~~--~~~~~~~~~~~~~aDvVilavp 71 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS------GFKGKIYGYDIN-PESISKAVDLGIID--EGTTSIAKVEDFSPDFVMLSSP 71 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT------TCCSEEEEECSC-HHHHHHHHHTTSCS--EEESCGGGGGGTCCSEEEECSC
T ss_pred CcEEEEEecCHHHHHHHHHHHhc------CCCcEEEEEeCC-HHHHHHHHHCCCcc--cccCCHHHHhcCCCCEEEEcCC
Confidence 57999999999999999999998 87 77665543 44466677778741 11356778899 9999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecCchh---hhhhcccccCCCCCcEEEeccCC------ChhhHHHHHhhcccccCCC
Q 007987 188 DAAQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKG------MGPSVRRLYVQGKEINGAG 258 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i---~~~~~~~i~~p~dv~VI~v~Png------pg~~vR~ly~~G~e~~G~G 258 (582)
++...++++++.++++++++|+++++... ..+.+ .+++ .++..||.. |+.... ..+.|
T Consensus 72 ~~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~---~l~~--~~v~~~p~~~~~~~gp~~a~~--------~l~~g 138 (281)
T 2g5c_A 72 VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLEN---ILGK--RFVGGHPIAGTEKSGVEYSLD--------NLYEG 138 (281)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHH---HHGG--GEECEEEECCCSCCSGGGCCS--------STTTT
T ss_pred HHHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHH---hccc--cceeeccccCCccCChhhhhh--------HHhCC
Confidence 99999999999999999999988877643 22322 2232 266666632 233211 12357
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHH-HHHHHHHHHcCCCHHHHHHHH
Q 007987 259 INSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIV-ESLFRRFTENGMNEDLAYKNT 337 (582)
Q Consensus 259 v~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAli-eAl~d~lVe~Gl~pe~Ay~~~ 337 (582)
.+++++++...+.++.+.+..++..+|.. ++.+ .+...|.+. .++|.+|+++ -++.+.+.+.|++++.++.++
T Consensus 139 ~~~~~~~~~~~~~~~~~~v~~l~~~~g~~-~~~~---~~~~~d~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~ 212 (281)
T 2g5c_A 139 KKVILTPTKKTDKKRLKLVKRVWEDVGGV-VEYM---SPELHDYVF--GVVSHLPHAVAFALVDTLIHMSTPEVDLFKYP 212 (281)
T ss_dssp CEEEECCCSSSCHHHHHHHHHHHHHTTCE-EEEC---CHHHHHHHH--HHHTHHHHHHHHHHHHHHHHHCBTTBCGGGCC
T ss_pred CCEEEecCCCCCHHHHHHHHHHHHHcCCE-EEEc---CHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcccchHHHHhhc
Confidence 88889988888899999999999999973 1122 222234444 5899999984 777888888899999888888
Q ss_pred HHHHHHHHHHHH
Q 007987 338 VECITGIISKII 349 (582)
Q Consensus 338 ~~ei~glia~lI 349 (582)
.+.+.+ ++++.
T Consensus 213 ~~~~~~-~~r~~ 223 (281)
T 2g5c_A 213 GGGFKD-FTRIA 223 (281)
T ss_dssp TTTGGG-C---C
T ss_pred cccHHH-HhHHh
Confidence 887765 45544
No 15
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.71 E-value=1.5e-16 Score=161.32 Aligned_cols=188 Identities=14% Similarity=0.060 Sum_probs=140.0
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
++|+||| +|+||.++|.+|++. |++|++.+++.. .+..++++++|+||++||++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~------G~~V~~~~~~~~------------------~~~~~~~~~aDvVilavp~~~ 77 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRAS------GYPISILDREDW------------------AVAESILANADVVIVSVPINL 77 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTT------TCCEEEECTTCG------------------GGHHHHHTTCSEEEECSCGGG
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC------CCeEEEEECCcc------------------cCHHHHhcCCCEEEEeCCHHH
Confidence 7899999 999999999999998 888877665422 135678899999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeeccCCC
Q 007987 191 QADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (582)
Q Consensus 191 ~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~t 270 (582)
..++++++.++++++++|++++|+....++.-.-..+ .+++..||.. ++.. . ...|.+.+++++. +
T Consensus 78 ~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~~--~~~v~~hP~~-g~~~-----~----~~~g~~~~l~~~~--~ 143 (298)
T 2pv7_A 78 TLETIERLKPYLTENMLLADLTSVKREPLAKMLEVHT--GAVLGLHPMF-GADI-----A----SMAKQVVVRCDGR--F 143 (298)
T ss_dssp HHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHCS--SEEEEEEECS-CTTC-----S----CCTTCEEEEEEEE--C
T ss_pred HHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhcC--CCEEeeCCCC-CCCc-----h----hhcCCeEEEecCC--C
Confidence 9999999999999999999998876432221000122 5788888842 2221 1 1246677777765 6
Q ss_pred HHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHH
Q 007987 271 GRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIV-ESLFRRFTENGMNEDLAYKNTVECITG 343 (582)
Q Consensus 271 geale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAli-eAl~d~lVe~Gl~pe~Ay~~~~~ei~g 343 (582)
+++.+.+..++..+|.. ++.+ .+.+.|.+. .++|++|+++ -++.+.+.+.|++++.+++++.+...+
T Consensus 144 ~~~~~~v~~l~~~~G~~-~~~~---~~~~~d~~~--a~~~~~p~~~a~~l~~~l~~~g~~~~~~~~la~~~f~~ 211 (298)
T 2pv7_A 144 PERYEWLLEQIQIWGAK-IYQT---NATEHDHNM--TYIQALRHFSTFANGLHLSKQPINLANLLALSSPIYRL 211 (298)
T ss_dssp GGGTHHHHHHHHHTTCE-EEEC---CHHHHHHHH--HHHTHHHHHHHHHHHHHHTTSSCCHHHHHHTCCHHHHH
T ss_pred HHHHHHHHHHHHHcCCE-EEEC---CHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcCHHHHH
Confidence 78899999999999973 1122 222334444 5899999984 566777778999999999998888865
No 16
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.71 E-value=7.2e-17 Score=168.47 Aligned_cols=187 Identities=13% Similarity=0.090 Sum_probs=137.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhcc----CCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG----SDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~----ADIVILaVP 187 (582)
+||+|||+|+||.++|++|++. |++|++.++ +....+.+.+.|+.. ..++++++++ +|+||+++|
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~------G~~V~~~dr-~~~~~~~a~~~G~~~----~~~~~e~~~~a~~~aDlVilavP 77 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA------NHSVFGYNR-SRSGAKSAVDEGFDV----SADLEATLQRAAAEDALIVLAVP 77 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECS-CHHHHHHHHHTTCCE----ESCHHHHHHHHHHTTCEEEECSC
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCEEEEEeC-CHHHHHHHHHcCCee----eCCHHHHHHhcccCCCEEEEeCC
Confidence 7899999999999999999999 988866654 445677888889864 5677777764 699999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecCchhh---hhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEe
Q 007987 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~---~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliA 264 (582)
++...++++++.++ ++|++|+++++++.. .+.. .++ ++++|..||...... ..+..+......|.+++++
T Consensus 78 ~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~---~~~-~~~~v~~HPmaG~e~--sG~~aa~~~Lf~g~~~ilt 150 (341)
T 3ktd_A 78 MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKA---RNM-QHRYVGSHPMAGTAN--SGWSASMDGLFKRAVWVVT 150 (341)
T ss_dssp HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHH---TTC-GGGEECEEECCSCC---CCGGGCCSSTTTTCEEEEC
T ss_pred HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHH---hCC-CCcEecCCccccccc--cchhhhhhHHhcCCeEEEE
Confidence 99989999999886 899999999888643 3332 233 578999999542211 1222333334567889899
Q ss_pred eccCCCHH--------HHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHHHH-HHHH
Q 007987 265 VHQDVDGR--------ATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIVES-LFRR 322 (582)
Q Consensus 265 v~qd~tge--------ale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAlieA-l~d~ 322 (582)
+..+.+.+ +++.++.++.++|+. ++. ..+.+.|.+. .+++.+|.++-. +.+.
T Consensus 151 p~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~-v~~---~~~~~HD~~~--A~vshlPh~ia~aL~~~ 211 (341)
T 3ktd_A 151 FDQLFDGTDINSTWISIWKDVVQMALAVGAE-VVP---SRVGPHDAAA--ARVSHLTHILAETLAIV 211 (341)
T ss_dssp CGGGTSSCCCCHHHHHHHHHHHHHHHHTTCE-EEE---CCHHHHHHHH--HHHTHHHHHHHHHHHHH
T ss_pred eCCCCChhhhccchHHHHHHHHHHHHHcCCE-EEE---eCHHHHHHHH--HHHhHHHHHHHHHHHHH
Confidence 98877777 899999999999974 222 2333444444 588999997443 3343
No 17
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.69 E-value=3.3e-16 Score=155.46 Aligned_cols=222 Identities=14% Similarity=0.060 Sum_probs=153.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchhH
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a~ 191 (582)
++|+|||+|+||.+++..|.+. |++|++.+++ ....+.+.+.|+.. ....+++++ +++|+||+++|++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~--~~~~~~~~~-~~~D~vi~av~~~~~ 70 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR------GHYLIGVSRQ-QSTCEKAVERQLVD--EAGQDLSLL-QTAKIIFLCTPIQLI 70 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTSCS--EEESCGGGG-TTCSEEEECSCHHHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHHhCCCCc--cccCCHHHh-CCCCEEEEECCHHHH
Confidence 5899999999999999999998 8887766554 44455566777631 114577788 899999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCC------ChhhHHHHHhhcccccCCCceEEEee
Q 007987 192 ADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKG------MGPSVRRLYVQGKEINGAGINSSFAV 265 (582)
Q Consensus 192 ~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Png------pg~~vR~ly~~G~e~~G~Gv~aliAv 265 (582)
.++++++.++++++++|+++++.+...++.-.-.++ +++..||.. |.+.. .....|.+..+++
T Consensus 71 ~~~~~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~---~~~~~~p~~g~~~~gp~~a~--------~~~~~g~~~~~~~ 139 (279)
T 2f1k_A 71 LPTLEKLIPHLSPTAIVTDVASVKTAIAEPASQLWS---GFIGGHPMAGTAAQGIDGAE--------ENLFVNAPYVLTP 139 (279)
T ss_dssp HHHHHHHGGGSCTTCEEEECCSCCHHHHHHHHHHST---TCEEEEECCCCSCSSGGGCC--------TTTTTTCEEEEEE
T ss_pred HHHHHHHHhhCCCCCEEEECCCCcHHHHHHHHHHhC---CEeecCcccCCccCCHHHHh--------HHHhCCCcEEEec
Confidence 999999999999999988877765432221000222 566667743 22221 0113466777887
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHH-HHHHHHHHHHcCCC--HHHHHHHHHHHHH
Q 007987 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGI-VESLFRRFTENGMN--EDLAYKNTVECIT 342 (582)
Q Consensus 266 ~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAl-ieAl~d~lVe~Gl~--pe~Ay~~~~~ei~ 342 (582)
....+.+..+.+..++..+|.. .....+...|.+. .+++.+|++ .-++.+.+++.|++ ++.++.++.+.+.
T Consensus 140 ~~~~~~~~~~~v~~l~~~~g~~----~~~~~~~~~~~~~--~~~~~~p~~i~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 213 (279)
T 2f1k_A 140 TEYTDPEQLACLRSVLEPLGVK----IYLCTPADHDQAV--AWISHLPVMVSAALIQACAGEKDGDILKLAQNLASSGFR 213 (279)
T ss_dssp CTTCCHHHHHHHHHHHGGGTCE----EEECCHHHHHHHH--HHHTHHHHHHHHHHHHHHHTCSCHHHHHHHHHHCCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCE----EEEcCHHHHHHHH--HHHhhHHHHHHHHHHHHHHhcccccchhHHHhhcCCccc
Confidence 7777889999999999999963 1222233333333 688888775 56788888999988 8999998888886
Q ss_pred HHHHHHHHHhcHHHHHHhcC
Q 007987 343 GIISKIISTQGMLAVYNSFS 362 (582)
Q Consensus 343 glia~lI~e~Gi~~m~d~vS 362 (582)
+ ++++. ..--..+++.++
T Consensus 214 ~-~~r~~-~~~p~~~~~~~~ 231 (279)
T 2f1k_A 214 D-TSRVG-GGNPELGTMMAT 231 (279)
T ss_dssp H-HHTGG-GSCHHHHHHHHH
T ss_pred c-hhccc-CCCHHHHHHHHH
Confidence 5 44443 222344444443
No 18
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.59 E-value=2.4e-14 Score=141.35 Aligned_cols=205 Identities=13% Similarity=0.083 Sum_probs=134.8
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCce-EEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~-ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
+.+ ++|+|||+|.||.+++..|.+. |++ |.+.+++..+..+.+...|+.. ..+.+++++++|+||+++
T Consensus 8 ~~~-m~i~iiG~G~mG~~~a~~l~~~------g~~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~Dvvi~av 76 (266)
T 3d1l_A 8 IED-TPIVLIGAGNLATNLAKALYRK------GFRIVQVYSRTEESARELAQKVEAEY----TTDLAEVNPYAKLYIVSL 76 (266)
T ss_dssp GGG-CCEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSHHHHHHHHHHTTCEE----ESCGGGSCSCCSEEEECC
T ss_pred CCC-CeEEEEcCCHHHHHHHHHHHHC------CCeEEEEEeCCHHHHHHHHHHcCCce----eCCHHHHhcCCCEEEEec
Confidence 345 7899999999999999999998 887 5555554333223333447764 567888899999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEe-cCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEee
Q 007987 187 SDAAQADNYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~~a-~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv 265 (582)
|+..+.++++++.+.++++++|++. .|+....+.+ .++. .. ..||-.|....+ . . ...+.+.++
T Consensus 77 ~~~~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~---~~~~-~~--~~~~~~~~~g~~-~-~-----~~~~~~~~v-- 141 (266)
T 3d1l_A 77 KDSAFAELLQGIVEGKREEALMVHTAGSIPMNVWEG---HVPH-YG--VFYPMQTFSKQR-E-V-----DFKEIPFFI-- 141 (266)
T ss_dssp CHHHHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTT---TCSS-EE--EEEECCCC---C-C-C-----CCTTCCEEE--
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEECCCCCchHHHHH---HHHh-cc--CcCCceecCCCc-h-h-----hcCCCeEEE--
Confidence 9999989999999999999987654 5666544432 2222 11 245544421100 0 0 123456544
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh-hhhchHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHH
Q 007987 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER-ILLGAVHGIVESLFRRF-TENGMNEDLAYKNTVECITG 343 (582)
Q Consensus 266 ~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq-vLsG~~pAlieAl~d~l-Ve~Gl~pe~Ay~~~~~ei~g 343 (582)
...+++..+.+..+++.+|.. + ....+.....++.. .+++.+++++-++.+.+ .+.|++++.++....+++.+
T Consensus 142 -~~~~~~~~~~~~~l~~~~g~~-~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~~~~Gl~~~~~~~l~~~~~~~ 216 (266)
T 3d1l_A 142 -EASSTEDAAFLKAIASTLSNR-V---YDADSEQRKSLHLAAVFTCNFTNHMYALAAELLKKYNLPFDVMLPLIDETARK 216 (266)
T ss_dssp -EESSHHHHHHHHHHHHTTCSC-E---EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGGHHHHHHHHHH
T ss_pred -ecCCHHHHHHHHHHHHhcCCc-E---EEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 223678899999999999963 1 11111111235544 67777776544444444 47899999998888887654
No 19
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=99.55 E-value=1.1e-13 Score=142.91 Aligned_cols=193 Identities=14% Similarity=0.103 Sum_probs=133.2
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHH-----------HcCceecC-----------CC
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-----------AAGFTEEN-----------GT 168 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~-----------~~G~~~~d-----------~t 168 (582)
+++|+|||+|.||.++|.+|.++ |++|++.+++. ...+.+. +.|... + ..
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~------G~~V~l~d~~~-~~~~~~~~~i~~~l~~l~~~G~~~-g~~~~~~~~~~i~~ 77 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEP-RQITGALENIRKEMKSLQQSGSLK-GSLSAEEQLSLISS 77 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCH-HHHHHHHHHHHHHHHHHHHTTCCC-SSSCHHHHHHTEEE
T ss_pred CceEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHHHHHHHHHHHHcCccc-cccchHHHhhceEE
Confidence 38999999999999999999999 99988776653 3344432 234221 0 01
Q ss_pred cCCHHhhhccCCeEEEeccchh--HHHHHHHHHhcCCCCcEEE-EecCchhhhhhcccccCCCCCcEEEeccCCChhhHH
Q 007987 169 LGDIYETISGSDLVLLLISDAA--QADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVR 245 (582)
Q Consensus 169 ~~~~~Eav~~ADIVILaVPd~a--~~~Vl~eI~~~Lk~GaiL~-~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR 245 (582)
..++++++++||+||+++|... ...++++|.++++++++|+ .++|+.+..+.+ .++...+++.+||..|.+.
T Consensus 78 ~~~~~eav~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~---~~~~~~r~ig~Hp~~P~~~-- 152 (319)
T 2dpo_A 78 CTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYY-- 152 (319)
T ss_dssp ECCHHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTT--
T ss_pred eCCHHHHHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHH---hcCCCCCeEEeecCCchhh--
Confidence 4678899999999999999754 3568899999999999875 667888776655 3445568999999998765
Q ss_pred HHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHHHHHHHHHHH
Q 007987 246 RLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIVESLFRRFTE 325 (582)
Q Consensus 246 ~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAlieAl~d~lVe 325 (582)
+ + ..-+.++...+++.++.+..+++.+|...+. ...+ ..-| +..-.+.+++..++..+.+
T Consensus 153 ----------~-~-lveiv~g~~t~~e~~~~~~~l~~~lGk~~v~---v~~~--~~Gf---i~Nrll~a~~~EA~~l~~~ 212 (319)
T 2dpo_A 153 ----------I-P-LVELVPHPETSPATVDRTHALMRKIGQSPVR---VLKE--IDGF---VLNRLQYAIISEAWRLVEE 212 (319)
T ss_dssp ----------C-C-EEEEEECTTCCHHHHHHHHHHHHHTTCEEEE---CSSC--CTTT---THHHHHHHHHHHHHHHHHT
T ss_pred ----------c-c-eEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE---ECCC--cCCc---hHHHHHHHHHHHHHHHHHh
Confidence 1 2 2336778888999999999999999974111 0011 1111 1222233455555555555
Q ss_pred cCCCHHHHHHH
Q 007987 326 NGMNEDLAYKN 336 (582)
Q Consensus 326 ~Gl~pe~Ay~~ 336 (582)
.|.++++....
T Consensus 213 g~~~~~~id~a 223 (319)
T 2dpo_A 213 GIVSPSDLDLV 223 (319)
T ss_dssp TSSCHHHHHHH
T ss_pred CCCCHHHHHHH
Confidence 66688876553
No 20
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.53 E-value=1.7e-13 Score=137.76 Aligned_cols=189 Identities=14% Similarity=0.117 Sum_probs=133.2
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc-----------C--------------ceec
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-----------G--------------FTEE 165 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~-----------G--------------~~~~ 165 (582)
++||+|||+|.||.++|+.|..+ |++|++.+++. ...+.+.+. | +..
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~------G~~V~l~d~~~-~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~- 75 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH------GFAVTAYDINT-DALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY- 75 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSH-HHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEeCCH-HHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-
Confidence 48999999999999999999999 99987766553 334444332 2 222
Q ss_pred CCCcCCHHhhhccCCeEEEeccch--hHHHHHHHHHhcCCCCcEEE-EecCchhhhhhcccccCCCCCcEEEeccCCChh
Q 007987 166 NGTLGDIYETISGSDLVLLLISDA--AQADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (582)
Q Consensus 166 d~t~~~~~Eav~~ADIVILaVPd~--a~~~Vl~eI~~~Lk~GaiL~-~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~ 242 (582)
..++++++++||+||+++|++ ....+++++.+.++++++|+ .++++.+..+.+ .++...+++.+||..|..
T Consensus 76 ---~~~~~~~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~---~~~~~~~~ig~h~~~p~~ 149 (283)
T 4e12_A 76 ---SDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVG---YTGRGDKFLALHFANHVW 149 (283)
T ss_dssp ---ESCHHHHTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHH---HHSCGGGEEEEEECSSTT
T ss_pred ---eCCHHHHhccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHh---hcCCCcceEEEccCCCcc
Confidence 467888999999999999987 55678899999999999876 667777665544 233446899999998876
Q ss_pred hHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHHHHHHHH
Q 007987 243 SVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIVESLFRR 322 (582)
Q Consensus 243 ~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAlieAl~d~ 322 (582)
. +-...++++...+++.++.+..+++.+|...+. .. .+ .. -| +..-.+.+++..++..
T Consensus 150 ~--------------~~lvevv~~~~t~~~~~~~~~~l~~~~g~~~v~-v~--~~-~~-g~---i~nr~~~~~~~ea~~l 207 (283)
T 4e12_A 150 V--------------NNTAEVMGTTKTDPEVYQQVVEFASAIGMVPIE-LK--KE-KA-GY---VLNSLLVPLLDAAAEL 207 (283)
T ss_dssp T--------------SCEEEEEECTTSCHHHHHHHHHHHHHTTCEEEE-CS--SC-CT-TT---THHHHHHHHHHHHHHH
T ss_pred c--------------CceEEEEeCCCCCHHHHHHHHHHHHHcCCEEEE-Ee--cC-CC-CE---EehHHHHHHHHHHHHH
Confidence 5 223346778888999999999999999974211 00 11 11 11 2222333455555666
Q ss_pred HHHcCCCHHHHHH
Q 007987 323 FTENGMNEDLAYK 335 (582)
Q Consensus 323 lVe~Gl~pe~Ay~ 335 (582)
+.+.|.+|++...
T Consensus 208 ~~~g~~~~~~id~ 220 (283)
T 4e12_A 208 LVDGIADPETIDK 220 (283)
T ss_dssp HHTTSCCHHHHHH
T ss_pred HHhCCCCHHHHHH
Confidence 6666679987554
No 21
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.53 E-value=6.6e-15 Score=147.42 Aligned_cols=211 Identities=11% Similarity=0.042 Sum_probs=126.3
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
++|+|||+|+||.+++++|.+. ++|+ +.+++..+..+.+...|. . ..+++++++++|+||+++|++.
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-------~~v~~v~~~~~~~~~~~~~~~g~-~----~~~~~~~~~~~DvVilav~~~~ 70 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-------YEIGYILSRSIDRARNLAEVYGG-K----AATLEKHPELNGVVFVIVPDRY 70 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----------CCCEECSSHHHHHHHHHHTCC-C----CCSSCCCCC---CEEECSCTTT
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-------CcEEEEEeCCHHHHHHHHHHcCC-c----cCCHHHHHhcCCEEEEeCChHH
Confidence 6899999999999999998643 3453 555543332333334565 3 5677788889999999999999
Q ss_pred HHHHHHHHHhcCCCCcEEEEec-CchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeeccCC
Q 007987 191 QADNYEKIFSCMKPNSILGLSH-GFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDV 269 (582)
Q Consensus 191 ~~~Vl~eI~~~Lk~GaiL~~a~-G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~ 269 (582)
+.++++++. +++++|+..+ ++.+..++. ........+..+|++|... +.+ .|++..++.
T Consensus 71 ~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~---~~~~~~~p~~~~~g~~~~~--~~~--------~~~~~~~~~---- 130 (276)
T 2i76_A 71 IKTVANHLN---LGDAVLVHCSGFLSSEIFKK---SGRASIHPNFSFSSLEKAL--EMK--------DQIVFGLEG---- 130 (276)
T ss_dssp HHHHHTTTC---CSSCCEEECCSSSCGGGGCS---SSEEEEEECSCC--CTTGG--GCG--------GGCCEEECC----
T ss_pred HHHHHHHhc---cCCCEEEECCCCCcHHHHHH---hhccccchhhhcCCCchhH--HHh--------CCCeEEEEe----
Confidence 888887765 6788776555 555544432 1100011122344544433 011 346664443
Q ss_pred CHHHHHHHHHHHHHhCCCccccccccccccccchhhh-hhhchHHHH-HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Q 007987 270 DGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER-ILLGAVHGI-VESLFRRFTENGMNEDLAYKNTVECITGIISK 347 (582)
Q Consensus 270 tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq-vLsG~~pAl-ieAl~d~lVe~Gl~pe~Ay~~~~~ei~glia~ 347 (582)
+.+..+.++.+++.+|.. ++. ..+...+.++.. +++|.++.. +..+.+.+++.|+++++|+ ..+.+.+ .++
T Consensus 131 ~~~~~~~~~~l~~~lG~~-~~~---v~~~~~~~~~~~~~l~~n~~~~~~~~a~~~~~~~Gl~~~~a~--~~~l~~~-~~~ 203 (276)
T 2i76_A 131 DERGLPIVKKIAEEISGK-YFV---IPSEKKKAYHLAAVIASNFPVALAYLSKRIYTLLGLDEPELL--IHTLMKG-VAD 203 (276)
T ss_dssp CTTTHHHHHHHHHHHCSC-EEE---CCGGGHHHHHHHHHHHHTTHHHHHHHHHHHHHTTTCSCHHHH--HHHHHHH-HHH
T ss_pred ChHHHHHHHHHHHHhCCC-EEE---ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHH--HHHHHHH-HHH
Confidence 345688999999999964 111 222233345444 566666654 4444567778999999987 6777766 677
Q ss_pred HHHHhcHHHHHHhcCcc
Q 007987 348 IISTQGMLAVYNSFSGE 364 (582)
Q Consensus 348 lI~e~Gi~~m~d~vS~~ 364 (582)
++.+.|. ++.++.+
T Consensus 204 ~~~~~gp---~~~~tgP 217 (276)
T 2i76_A 204 NIKKMRV---ECSLTGP 217 (276)
T ss_dssp HHHHSCG---GGGCCSH
T ss_pred HHHhcCh---HhhCCCC
Confidence 7878772 5556544
No 22
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.50 E-value=1.2e-13 Score=136.16 Aligned_cols=161 Identities=20% Similarity=0.170 Sum_probs=111.1
Q ss_pred ccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcc--------------cHHHHHHcCceecCCCc
Q 007987 104 LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR--------------SFAEARAAGFTEENGTL 169 (582)
Q Consensus 104 ~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sk--------------s~~~A~~~G~~~~d~t~ 169 (582)
....+.+ ++|+|||+|+||.++|++|.+. |++|++++|+..+ ..+.+.+.|... .
T Consensus 13 ~~~~~~~-~kIgiIG~G~mG~alA~~L~~~------G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 81 (245)
T 3dtt_A 13 ENLYFQG-MKIAVLGTGTVGRTMAGALADL------GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH----L 81 (245)
T ss_dssp ------C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE----E
T ss_pred cccccCC-CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee----c
Confidence 3466778 9999999999999999999999 9999888775433 112222334332 5
Q ss_pred CCHHhhhccCCeEEEeccchhHHHHHHHH-HhcCCCCcEEEEec-Cc-----------------hhhhhhcccccCCCCC
Q 007987 170 GDIYETISGSDLVLLLISDAAQADNYEKI-FSCMKPNSILGLSH-GF-----------------LLGHLQSMGLDFPKNI 230 (582)
Q Consensus 170 ~~~~Eav~~ADIVILaVPd~a~~~Vl~eI-~~~Lk~GaiL~~a~-G~-----------------~i~~~~~~~i~~p~dv 230 (582)
.++.|++++||+||+++|++.+.+++.++ .+.+ +|++|++++ |+ ....+++ .+| +.
T Consensus 82 ~~~~e~~~~aDvVilavp~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~---~l~-~~ 156 (245)
T 3dtt_A 82 AAFADVAAGAELVVNATEGASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQR---TFP-EA 156 (245)
T ss_dssp EEHHHHHHHCSEEEECSCGGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHH---HST-TS
T ss_pred cCHHHHHhcCCEEEEccCcHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHH---HCC-CC
Confidence 67889999999999999999999999988 7877 888877655 32 1234444 455 47
Q ss_pred cEEEeccCCChhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 231 GVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 231 ~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~ 287 (582)
+||+.+|+.++++....-.. -.|...++.... +.++.+.+..++..+|..
T Consensus 157 ~vv~~~~~~~a~v~~~~~~a-----~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~ 206 (245)
T 3dtt_A 157 KVVKTLNTMNASLMVDPGRA-----AGGDHSVFVSGN--DAAAKAEVATLLKSLGHQ 206 (245)
T ss_dssp EEEECSTTSCHHHHHCGGGT-----GGGCCCEEEECS--CHHHHHHHHHHHHHTTCC
T ss_pred eEEEeecccCHHHhcCcccc-----CCCCeeEEEECC--CHHHHHHHHHHHHHcCCC
Confidence 99999999999984211000 012222222233 678999999999999963
No 23
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.50 E-value=1.4e-13 Score=133.53 Aligned_cols=154 Identities=14% Similarity=0.102 Sum_probs=111.1
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEE-EecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViV-g~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~ 189 (582)
|+||+|||+|+||.++|.+|.+. |++|++ .+|+..+..+.+.+.|... ..+..++++++|+||+++|++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~------g~~V~~v~~r~~~~~~~l~~~~g~~~----~~~~~~~~~~aDvVilavp~~ 92 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAA------QIPAIIANSRGPASLSSVTDRFGASV----KAVELKDALQADVVILAVPYD 92 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHT------TCCEEEECTTCGGGGHHHHHHHTTTE----EECCHHHHTTSSEEEEESCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCCHHHHHHHHHHhCCCc----ccChHHHHhcCCEEEEeCChH
Confidence 48999999999999999999998 888877 5555445445566667653 345566789999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEE-EecCc--------------hhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccc
Q 007987 190 AQADNYEKIFSCMKPNSILG-LSHGF--------------LLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~GaiL~-~a~G~--------------~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~ 254 (582)
...++++++.+ + ++++|+ .+.|+ ....+++ .+| +.+|++++|+.|..... .|...
T Consensus 93 ~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~---~l~-~~~vv~~~~~~~~~v~~----~g~~~ 162 (220)
T 4huj_A 93 SIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSE---LVP-GAKVVKAFNTLPAAVLA----ADPDK 162 (220)
T ss_dssp GHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHH---HST-TCEEEEESCSSCHHHHT----SCSBC
T ss_pred HHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHH---HCC-CCCEEECCCCCCHHHhh----hCccc
Confidence 99999998877 5 477665 55566 4555554 455 57899999999988731 11111
Q ss_pred cCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 255 NGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 255 ~G~Gv~aliAv~qd~tgeale~alala~aiG~~ 287 (582)
.+.+...+++ .. +.++.+.+..++..+|..
T Consensus 163 ~~~~~~v~~~-g~--~~~~~~~v~~l~~~~G~~ 192 (220)
T 4huj_A 163 GTGSRVLFLS-GN--HSDANRQVAELISSLGFA 192 (220)
T ss_dssp SSCEEEEEEE-ES--CHHHHHHHHHHHHHTTCE
T ss_pred CCCCeeEEEe-CC--CHHHHHHHHHHHHHhCCC
Confidence 1122333233 33 488999999999999974
No 24
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.49 E-value=1e-12 Score=132.86 Aligned_cols=192 Identities=14% Similarity=0.127 Sum_probs=130.9
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHH-----------HHcCceecC-------------
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGFTEEN------------- 166 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A-----------~~~G~~~~d------------- 166 (582)
|++|+|||+|.||.++|..|.++ |++|++.+++.. ..+.+ .+.|.....
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~------G~~V~~~d~~~~-~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~ 87 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAAT------GHTVVLVDQTED-ILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLST 87 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHH-HHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHH-HHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhc
Confidence 57899999999999999999998 999877666432 23322 123321000
Q ss_pred -CCcCCHHhhhccCCeEEEeccchh--HHHHHHHHHhcCCCCcEEE-EecCchhhhhhcccccCCCCCcEEEeccCCChh
Q 007987 167 -GTLGDIYETISGSDLVLLLISDAA--QADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGP 242 (582)
Q Consensus 167 -~t~~~~~Eav~~ADIVILaVPd~a--~~~Vl~eI~~~Lk~GaiL~-~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~ 242 (582)
....++++++++||+||+++|+.. ...++++|.++++++++|+ .++|+.+..+.+ .++..-+++++||+.|..
T Consensus 88 i~~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~---~~~~~~~~~g~h~~~P~~ 164 (302)
T 1f0y_A 88 IATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIAN---ATTRQDRFAGLHFFNPVP 164 (302)
T ss_dssp EEEESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTT
T ss_pred eEEecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHH---hcCCcccEEEEecCCCcc
Confidence 013577778999999999999865 3568889999999999775 567887766644 233345799999998876
Q ss_pred hHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHHHHHHHH
Q 007987 243 SVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIVESLFRR 322 (582)
Q Consensus 243 ~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAlieAl~d~ 322 (582)
. +.++ .+......+++..+.+..++..+|...+. ..+. .-| +....+.+++..++..
T Consensus 165 ~------------~~~~--~i~~g~~~~~e~~~~~~~l~~~~G~~~v~----~~~~--~g~---i~nr~l~~~~~Ea~~l 221 (302)
T 1f0y_A 165 V------------MKLV--EVIKTPMTSQKTFESLVDFSKALGKHPVS----CKDT--PGF---IVNRLLVPYLMEAIRL 221 (302)
T ss_dssp T------------CCEE--EEECCTTCCHHHHHHHHHHHHHTTCEEEE----ECSC--TTT---THHHHHHHHHHHHHHH
T ss_pred c------------CceE--EEeCCCCCCHHHHHHHHHHHHHcCCceEE----ecCc--ccc---cHHHHHHHHHHHHHHH
Confidence 5 2233 35667778999999999999999964111 1111 112 2223334566666777
Q ss_pred HHHcCCCHHHHHH
Q 007987 323 FTENGMNEDLAYK 335 (582)
Q Consensus 323 lVe~Gl~pe~Ay~ 335 (582)
+.+.|.++++...
T Consensus 222 ~~~g~~~~~~id~ 234 (302)
T 1f0y_A 222 YERGDASKEDIDT 234 (302)
T ss_dssp HHTTSSCHHHHHH
T ss_pred HHcCCCCHHHHHH
Confidence 7777788877544
No 25
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.48 E-value=1.1e-13 Score=139.31 Aligned_cols=194 Identities=15% Similarity=0.178 Sum_probs=128.1
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch-
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~- 189 (582)
|+||+|||+|+||.++|.+|.+. |++|++.+++ ....+...+.|+.. ..+++++++++|+||+++|+.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~d~~-~~~~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~ 71 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLV-QSAVDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhC------CCeEEEEcCC-HHHHHHHHHCCCeE----cCCHHHHHhCCCeEEEECCCHH
Confidence 58999999999999999999999 9998777654 34456666778875 678999999999999999855
Q ss_pred hHHHHHH---HHHhcCCCCcEEEEecCchhh---hhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEE
Q 007987 190 AQADNYE---KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (582)
Q Consensus 190 a~~~Vl~---eI~~~Lk~GaiL~~a~G~~i~---~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~ali 263 (582)
...+++. ++.+.++++++|++.+..... .+.+ .....++.++. +|..++... ... |... +
T Consensus 72 ~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~--~~~~~g~~~~~-~pv~~~~~~---~~~-------g~l~-~ 137 (302)
T 2h78_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA--AARERGLAMLD-APVSGGTAG---AAA-------GTLT-F 137 (302)
T ss_dssp HHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHH--HHHHTTCCEEE-CCEESCHHH---HHH-------TCEE-E
T ss_pred HHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHH--HHHHcCCEEEE-EEccCChhh---Hhc-------CCce-E
Confidence 5577887 799999999998876654322 2222 11123677887 587776641 112 3333 2
Q ss_pred eeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHH----HHHHHHHHHHHHcCCCHHHHHHH
Q 007987 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVH----GIVESLFRRFTENGMNEDLAYKN 336 (582)
Q Consensus 264 Av~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~p----AlieAl~d~lVe~Gl~pe~Ay~~ 336 (582)
.+.. +.+..+.+..+++.+|...+ ...+.....+.- .+.+... +++.-++..+.+.|++++.....
T Consensus 138 ~~~g--~~~~~~~~~~ll~~~g~~~~----~~~~~~~~~~~K-l~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~ 207 (302)
T 2h78_A 138 MVGG--DAEALEKARPLFEAMGRNIF----HAGPDGAGQVAK-VCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEI 207 (302)
T ss_dssp EEES--CHHHHHHHHHHHHHHEEEEE----EEESTTHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred EeCC--CHHHHHHHHHHHHHhCCCeE----EcCCccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 2333 68899999999999996411 111111111000 2333333 24444455677889988765543
No 26
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.45 E-value=6.5e-13 Score=135.68 Aligned_cols=95 Identities=15% Similarity=0.157 Sum_probs=82.2
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCC-cccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccc
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-SRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~-sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd 188 (582)
+++|+|||+|+||.++|++|.+. |+ +|++.+++. .+..+.+.+.|+.. ..+++|+++++|+||+++|+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp~ 93 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA------GAIDMAAYDAASAESWRPRAEELGVSC----KASVAEVAGECDVIFSLVTA 93 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH------SCCEEEEECSSCHHHHHHHHHHTTCEE----CSCHHHHHHHCSEEEECSCT
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCCeEEEEcCCCCHHHHHHHHHCCCEE----eCCHHHHHhcCCEEEEecCc
Confidence 38999999999999999999999 98 888777652 45567777889875 67899999999999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEecCch
Q 007987 189 AAQADNYEKIFSCMKPNSILGLSHGFL 215 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~~a~G~~ 215 (582)
....++++++.+.++++++|++.++..
T Consensus 94 ~~~~~~~~~l~~~l~~~~ivvd~st~~ 120 (312)
T 3qsg_A 94 QAALEVAQQAGPHLCEGALYADFTSCS 120 (312)
T ss_dssp TTHHHHHHHHGGGCCTTCEEEECCCCC
T ss_pred hhHHHHHHhhHhhcCCCCEEEEcCCCC
Confidence 999999999999999999998877654
No 27
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.44 E-value=7.4e-13 Score=132.70 Aligned_cols=195 Identities=15% Similarity=0.095 Sum_probs=127.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccc-hh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD-AA 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd-~a 190 (582)
+||+|||+|.||.++|++|.+. |++|++++++.. ..+...+.|+.. ..+++++++++|+||+++|+ ..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~~~-~~~~~~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~~ 70 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA------GCSVTIWNRSPE-KAEELAALGAER----AATPCEVVESCPVTFAMLADPAA 70 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG-GGHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC------CCeEEEEcCCHH-HHHHHHHCCCee----cCCHHHHHhcCCEEEEEcCCHHH
Confidence 7899999999999999999999 999887766544 455666678875 67899999999999999995 56
Q ss_pred HHHHH---HHHHhcCCCCcEEEEecCchhhhhhc-ccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeec
Q 007987 191 QADNY---EKIFSCMKPNSILGLSHGFLLGHLQS-MGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (582)
Q Consensus 191 ~~~Vl---~eI~~~Lk~GaiL~~a~G~~i~~~~~-~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~ 266 (582)
..+++ +++.+.+++|++|++.++........ .......++.++. +|-..+... ... |...+++ .
T Consensus 71 ~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~---a~~-------g~l~~~~-g 138 (287)
T 3pef_A 71 AEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLE-APVSGSKKP---AED-------GTLIILA-A 138 (287)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHH---HHH-------TCEEEEE-E
T ss_pred HHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHH---Hhc-------CCEEEEE-e
Confidence 77888 78999999999998887764332111 0001123667776 774433331 122 3434333 3
Q ss_pred cCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHH----HHHHHHHHHHHcCCCHHHHHHH
Q 007987 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHG----IVESLFRRFTENGMNEDLAYKN 336 (582)
Q Consensus 267 qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pA----lieAl~d~lVe~Gl~pe~Ay~~ 336 (582)
. +.+..+.+..+++.+|... +.. .........- .+.+...+ ++.-++..+.+.|++++..+..
T Consensus 139 g--~~~~~~~~~~ll~~~g~~~-~~~---g~~g~~~~~K-l~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~ 205 (287)
T 3pef_A 139 G--DRNLYDEAMPGFEKMGKKI-IHL---GDVGKGAEMK-LVVNMVMGGMMACFCEGLALGEKAGLATDAILDV 205 (287)
T ss_dssp E--CHHHHHHHHHHHHHHEEEE-EEC---SSTTHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHhCCCe-EEe---CCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 3 4688999999999999741 111 1111100000 23333333 3444556677889998876554
No 28
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.44 E-value=1e-12 Score=134.53 Aligned_cols=150 Identities=19% Similarity=0.268 Sum_probs=107.3
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
|+||||||+|+||.+||+||.++ |++|++++|+.++ .+...+.|... +.++.|+++++|+||+++|+..
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~------G~~v~v~dr~~~~-~~~l~~~Ga~~----a~s~~e~~~~~dvv~~~l~~~~ 71 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKA------GYLLNVFDLVQSA-VDGLVAAGASA----ARSARDAVQGADVVISMLPASQ 71 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT------TCEEEEECSSHHH-HHHHHHTTCEE----CSSHHHHHTTCSEEEECCSCHH
T ss_pred cCEEEEeeehHHHHHHHHHHHhC------CCeEEEEcCCHHH-HHHHHHcCCEE----cCCHHHHHhcCCceeecCCchH
Confidence 68999999999999999999999 9999888776443 56667789886 7899999999999999999887
Q ss_pred HH-HHHHH---HHhcCCCCcEEEEecCchhh---hhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEE
Q 007987 191 QA-DNYEK---IFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (582)
Q Consensus 191 ~~-~Vl~e---I~~~Lk~GaiL~~a~G~~i~---~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~ali 263 (582)
+. +|+.. +.+.+++|++|++.+-.... .+.+ ..-..++.++- +|-.-+.. .=++ |--. |
T Consensus 72 ~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~--~~~~~G~~~lD-aPVsGg~~---~A~~-------G~L~-i 137 (300)
T 3obb_A 72 HVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHA--AARERGLAMLD-APVSGGTA---GAAA-------GTLT-F 137 (300)
T ss_dssp HHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHH---HHHH-------TCEE-E
T ss_pred HHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEe-cCCCCCHH---HHHh-------CCEE-E
Confidence 75 57753 78899999999988755422 1211 11234677763 45221221 1112 3333 3
Q ss_pred eeccCCCHHHHHHHHHHHHHhCCC
Q 007987 264 AVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 264 Av~qd~tgeale~alala~aiG~~ 287 (582)
-+.. +.++.+.++.+++.+|..
T Consensus 138 mvGG--~~~~~~~~~p~l~~~g~~ 159 (300)
T 3obb_A 138 MVGG--DAEALEKARPLFEAMGRN 159 (300)
T ss_dssp EEES--CHHHHHHHHHHHHHHEEE
T ss_pred EEeC--CHHHHHHHHHHHHHhCCC
Confidence 3344 578999999999999964
No 29
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.42 E-value=6.9e-12 Score=135.87 Aligned_cols=194 Identities=14% Similarity=0.158 Sum_probs=133.7
Q ss_pred CCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcc-------cHHHHHHcCceec-------C--CCcCCHH
Q 007987 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-------SFAEARAAGFTEE-------N--GTLGDIY 173 (582)
Q Consensus 110 gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sk-------s~~~A~~~G~~~~-------d--~t~~~~~ 173 (582)
.++||+|||+|.||.+||..|.++ |++|++.+++.++ ..+.+.+.|.... + ....++
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~a------G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl- 125 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLA------GIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDF- 125 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCG-
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC------CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCH-
Confidence 348999999999999999999999 9999887765432 1233444553200 0 013455
Q ss_pred hhhccCCeEEEeccchhH--HHHHHHHHhcCCCCcEEE-EecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhh
Q 007987 174 ETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQ 250 (582)
Q Consensus 174 Eav~~ADIVILaVPd~a~--~~Vl~eI~~~Lk~GaiL~-~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~ 250 (582)
+++++||+||+++|.+.. .+++++|.+.++++++|+ .++++.+..+.+ ..+...+++.+||..|.+..
T Consensus 126 ~al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~---~~~~p~r~iG~HffnPv~~m------ 196 (460)
T 3k6j_A 126 HKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISS---VLRDPSNLVGIHFFNPANVI------ 196 (460)
T ss_dssp GGCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHT---TSSSGGGEEEEECCSSTTTC------
T ss_pred HHHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHH---hccCCcceEEEEecchhhhC------
Confidence 478999999999997643 468899999999999984 677888777655 33444689999998887751
Q ss_pred cccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHHHHHHHHHHHcCCCH
Q 007987 251 GKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIVESLFRRFTENGMNE 330 (582)
Q Consensus 251 G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAlieAl~d~lVe~Gl~p 330 (582)
-..-+.+....+++.++.+..+++.+|...+. ..+ ..-| +..-.+.+++..+...+.+.|.++
T Consensus 197 --------~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~----v~d--~pGf---i~Nril~~~~~EA~~l~~~~Ga~~ 259 (460)
T 3k6j_A 197 --------RLVEIIYGSHTSSQAIATAFQACESIKKLPVL----VGN--CKSF---VFNRLLHVYFDQSQKLMYEYGYLP 259 (460)
T ss_dssp --------CEEEEECCSSCCHHHHHHHHHHHHHTTCEEEE----ESS--CCHH---HHHHHHHHHHHHHHHHHHTSCCCH
T ss_pred --------CEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEE----Eec--ccHH---HHHHHHHHHHHHHHHHHHHcCCCH
Confidence 12335667778999999999999999975211 111 1112 122223345555555566899999
Q ss_pred HHHHHH
Q 007987 331 DLAYKN 336 (582)
Q Consensus 331 e~Ay~~ 336 (582)
++....
T Consensus 260 e~ID~a 265 (460)
T 3k6j_A 260 HQIDKI 265 (460)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 876664
No 30
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.42 E-value=2.3e-12 Score=128.38 Aligned_cols=153 Identities=14% Similarity=0.107 Sum_probs=105.0
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCC--------CcCCHHhhhc---cC
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG--------TLGDIYETIS---GS 179 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~--------t~~~~~Eav~---~A 179 (582)
|++|+|||+|+||.++|..|.++ |++|++.+|+. ...+...+.|+...+. ...+..++.+ ++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQG------GNDVTLIDQWP-AHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQV 75 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCC
T ss_pred CCeEEEECcCHHHHHHHHHHHhC------CCcEEEEECCH-HHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCC
Confidence 47999999999999999999998 99887766643 3345555557543100 0113344444 89
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCCcEEE-EecCchh-hhhhcccccCCCCCcEEEe---------ccCCChhhHHHHH
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQSMGLDFPKNIGVIAV---------CPKGMGPSVRRLY 248 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~-~a~G~~i-~~~~~~~i~~p~dv~VI~v---------~Pngpg~~vR~ly 248 (582)
|+||+++|+....++++++.++++++++|+ .+.|+.. ..+.+ .+++. +|+.. .|+.+...
T Consensus 76 d~vi~~v~~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~---~~~~~-~vi~g~~~~~~~~~~p~~~~~~----- 146 (316)
T 2ew2_A 76 DLIIALTKAQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEK---YVPKE-NILVGITMWTAGLEGPGRVKLL----- 146 (316)
T ss_dssp SEEEECSCHHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTT---TSCGG-GEEEEEECCCCEEEETTEEEEC-----
T ss_pred CEEEEEeccccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHH---HcCCc-cEEEEEeeeeeEEcCCCEEEEe-----
Confidence 999999999999999999999999998765 4467764 34433 34433 56533 34332222
Q ss_pred hhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 249 ~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~ 287 (582)
+.|.+. +.+....+.+..+.+..++..+|..
T Consensus 147 -------~~g~~~-i~~~~~~~~~~~~~~~~ll~~~g~~ 177 (316)
T 2ew2_A 147 -------GDGEIE-LENIDPSGKKFALEVVDVFQKAGLN 177 (316)
T ss_dssp -------SCCCEE-EEESSGGGHHHHHHHHHHHHHTTCC
T ss_pred -------cCCcEE-EeecCCCccHHHHHHHHHHHhCCCC
Confidence 567777 4444444677889999999999964
No 31
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.42 E-value=1e-12 Score=131.60 Aligned_cols=196 Identities=15% Similarity=0.082 Sum_probs=126.3
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch-
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~- 189 (582)
|++|+|||+|+||.++|++|.+. |++|++++++..+ .+...+.|+.. ..+++|+++++|+||+++|+.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~----~~~~~~~~~~advvi~~v~~~~ 69 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA------GFDVTVWNRNPAK-CAPLVALGARQ----ASSPAEVCAACDITIAMLADPA 69 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH------TCCEEEECSSGGG-GHHHHHHTCEE----CSCHHHHHHHCSEEEECCSSHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHC------CCeEEEEcCCHHH-HHHHHHCCCee----cCCHHHHHHcCCEEEEEcCCHH
Confidence 57999999999999999999999 9998877765444 45556668875 678999999999999999986
Q ss_pred hHHHHH---HHHHhcCCCCcEEEEecCchhhhhhc-ccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEee
Q 007987 190 AQADNY---EKIFSCMKPNSILGLSHGFLLGHLQS-MGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (582)
Q Consensus 190 a~~~Vl---~eI~~~Lk~GaiL~~a~G~~i~~~~~-~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv 265 (582)
...+++ +++.+.+++|++|++++......... .......++.++.. |...+.. .-. .|...+++
T Consensus 70 ~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~-pv~g~~~---~a~-------~g~l~~~~- 137 (287)
T 3pdu_A 70 AAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEA-PVSGTKK---PAE-------DGTLIILA- 137 (287)
T ss_dssp HHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEC-CEECCHH---HHH-------HTCEEEEE-
T ss_pred HHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEC-CccCCHH---HHh-------cCCEEEEE-
Confidence 566788 67889999999998887654321111 00011235666653 5332222 112 24434333
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh--hhhchHHH----HHHHHHHHHHHcCCCHHHHHHHHH
Q 007987 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER--ILLGAVHG----IVESLFRRFTENGMNEDLAYKNTV 338 (582)
Q Consensus 266 ~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq--vLsG~~pA----lieAl~d~lVe~Gl~pe~Ay~~~~ 338 (582)
.. +.+..+.+..+++.+|... +... ... -++. .+.+...+ ++.-++..+.+.|++++..+...-
T Consensus 138 gg--~~~~~~~~~~ll~~~g~~~-~~~g---~~g---~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 207 (287)
T 3pdu_A 138 AG--DQSLFTDAGPAFAALGKKC-LHLG---EVG---QGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLD 207 (287)
T ss_dssp EE--CHHHHHHTHHHHHHHEEEE-EECS---STT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred eC--CHHHHHHHHHHHHHhCCCE-EEcC---CCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 33 4788999999999999631 1110 000 0111 23333333 333345567889999987766433
No 32
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.41 E-value=1.5e-12 Score=132.47 Aligned_cols=194 Identities=14% Similarity=0.059 Sum_probs=125.9
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch-
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA- 189 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~- 189 (582)
|++|+|||+|+||.++|++|.+. |++|++++++.. ..+...+.|+.. ..+++++++++|+||+++|+.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~-~~~~l~~~g~~~----~~~~~~~~~~aDvvi~~vp~~~ 89 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKN------GFKVTVWNRTLS-KCDELVEHGASV----CESPAEVIKKCKYTIAMLSDPC 89 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSGG-GGHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHC------CCeEEEEeCCHH-HHHHHHHCCCeE----cCCHHHHHHhCCEEEEEcCCHH
Confidence 38999999999999999999999 999887766544 455566778875 678999999999999999975
Q ss_pred hHHHHH---HHHHhcCCCCcEEEEecCchhhhhhc-ccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEee
Q 007987 190 AQADNY---EKIFSCMKPNSILGLSHGFLLGHLQS-MGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (582)
Q Consensus 190 a~~~Vl---~eI~~~Lk~GaiL~~a~G~~i~~~~~-~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv 265 (582)
...+++ +++.+.+++|++|+++++........ .......++.++. +|-..+.. . -.. |...+++
T Consensus 90 ~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~--~-a~~-------g~l~i~~- 157 (310)
T 3doj_A 90 AALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKK--P-AED-------GQLIILA- 157 (310)
T ss_dssp HHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHH--H-HHH-------TCEEEEE-
T ss_pred HHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChh--H-Hhc-------CCeEEEE-
Confidence 556788 67889999999999888764322111 0001123566765 67332222 1 112 3444343
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh--hhhchHH----HHHHHHHHHHHHcCCCHHHHHHH
Q 007987 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER--ILLGAVH----GIVESLFRRFTENGMNEDLAYKN 336 (582)
Q Consensus 266 ~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq--vLsG~~p----AlieAl~d~lVe~Gl~pe~Ay~~ 336 (582)
.. +.+..+.+..+++.+|...+ .. .+... ++. .+.+... +++--++..+.+.|++++..+..
T Consensus 158 gg--~~~~~~~~~~ll~~~g~~~~-~~---g~~g~---a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~ 225 (310)
T 3doj_A 158 AG--DKALFEESIPAFDVLGKRSF-YL---GQVGN---GAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDI 225 (310)
T ss_dssp EE--CHHHHHHHHHHHHHHEEEEE-EC---SSTTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHHhCCCEE-Ee---CCcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 33 47899999999999996411 11 00000 111 2233332 23444455667889998866553
No 33
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.41 E-value=9.3e-12 Score=127.52 Aligned_cols=204 Identities=13% Similarity=0.081 Sum_probs=135.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc-------CceecCCCcCCHHhhhccCCeEEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------GFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~-------G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
|+|+|||+|.||.+||++|. + |++|++.+++. ...+.+.+. ++.. ..++++ +++||+||.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-a------G~~V~v~d~~~-~~~~~~~~~l~~~~~~~i~~----~~~~~~-~~~aDlVie 79 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-S------KHEVVLQDVSE-KALEAAREQIPEELLSKIEF----TTTLEK-VKDCDIVME 79 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH-HHHHHHHHHSCGGGGGGEEE----ESSCTT-GGGCSEEEE
T ss_pred CeEEEEeeCHHHHHHHHHHH-c------CCEEEEEECCH-HHHHHHHHHHHHHHhCCeEE----eCCHHH-HcCCCEEEE
Confidence 89999999999999999999 9 99988776653 445666665 5553 456665 889999999
Q ss_pred eccchhH--HHHHHHHHhcCCCCcEEE-EecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceE
Q 007987 185 LISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (582)
Q Consensus 185 aVPd~a~--~~Vl~eI~~~Lk~GaiL~-~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~a 261 (582)
++|+... ..++.++.+. ++++|+ .++++.+..+.+ ......+++.+||--|.+. +-..
T Consensus 80 avpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~---~~~~~~r~~G~Hf~~Pv~~--------------~~lv 140 (293)
T 1zej_A 80 AVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAE---RLDSPSRFLGVHWMNPPHV--------------MPLV 140 (293)
T ss_dssp CCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT--------------CCEE
T ss_pred cCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHH---HhhcccceEeEEecCcccc--------------CCEE
Confidence 9998875 3466777665 898885 677777765544 2333357999999776543 2344
Q ss_pred EEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHH-
Q 007987 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIVESLFRRFTENGMNEDLAYKNTVEC- 340 (582)
Q Consensus 262 liAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAlieAl~d~lVe~Gl~pe~Ay~~~~~e- 340 (582)
.+.+....+++.++.+..+++.+|... ....+. ...-+++. +.+.||+. +++.|+++++.....-..
T Consensus 141 eiv~g~~t~~~~~~~~~~l~~~lGk~~----v~v~d~---fi~Nrll~---~~~~EA~~--l~~~Gv~~e~id~~~~~g~ 208 (293)
T 1zej_A 141 EIVISRFTDSKTVAFVEGFLRELGKEV----VVCKGQ---SLVNRFNA---AVLSEASR--MIEEGVRAEDVDRVWKHHL 208 (293)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHTTCEE----EEEESS---CHHHHHHH---HHHHHHHH--HHHHTCCHHHHHHHHHTTH
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCeE----EEeccc---ccHHHHHH---HHHHHHHH--HHHhCCCHHHHHHHHHhcC
Confidence 466677789999999999999999741 111111 22222332 33445544 344499888766543211
Q ss_pred ---H--HHHHHHHHHHhcHHHHHHh
Q 007987 341 ---I--TGIISKIISTQGMLAVYNS 360 (582)
Q Consensus 341 ---i--~glia~lI~e~Gi~~m~d~ 360 (582)
+ .| --+++-..|++..+..
T Consensus 209 g~~~~~~G-P~~l~D~~Gld~~~~~ 232 (293)
T 1zej_A 209 GLLYTLFG-PLGNLDYIGLDVAYYA 232 (293)
T ss_dssp HHHHHHHH-HHHHHHHHCHHHHHHH
T ss_pred CCCCCCCC-HHHHHHHhchHHHHHH
Confidence 1 13 2345555666554443
No 34
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.39 E-value=7.6e-12 Score=136.08 Aligned_cols=214 Identities=12% Similarity=0.119 Sum_probs=141.3
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-----------cCceecC---------CCcC
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEEN---------GTLG 170 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-----------~G~~~~d---------~t~~ 170 (582)
++||+|||+|+||.++|.+|.++ |++|++.+++ ....+.+.+ .|..... ....
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a------G~~V~l~D~~-~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 77 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH------GHQVLLYDIS-AEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVT 77 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT------TCCEEEECSC-HHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeC
Confidence 37899999999999999999999 9998776654 333444332 3321000 0134
Q ss_pred CHHhhhccCCeEEEeccchhH--HHHHHHHHhcCCCCcEE-EEecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHH
Q 007987 171 DIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSIL-GLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (582)
Q Consensus 171 ~~~Eav~~ADIVILaVPd~a~--~~Vl~eI~~~Lk~GaiL-~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~l 247 (582)
++ +++++||+||+++|++.. .+++.+|.+.++++++| +.++++.+..+.+ .+....+++.+||..|.+..
T Consensus 78 ~~-~~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~---~~~~p~~~ig~hf~~Pa~v~--- 150 (483)
T 3mog_A 78 DI-HALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAA---EIKNPERVAGLHFFNPAPVM--- 150 (483)
T ss_dssp CG-GGGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TSSSGGGEEEEEECSSTTTC---
T ss_pred CH-HHhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHH---HccCccceEEeeecChhhhC---
Confidence 45 468999999999998854 46889999999999988 5788998876654 34445689999999998872
Q ss_pred HhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHHHHHHHHHHHcC
Q 007987 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIVESLFRRFTENG 327 (582)
Q Consensus 248 y~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAlieAl~d~lVe~G 327 (582)
--..++.+...+++.++.+..+++.+|...+ ...+.. -| +....+.+++..+...+.+.|
T Consensus 151 -----------~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v----~v~d~~--Gf---i~Nr~l~~~~~Ea~~l~~~g~ 210 (483)
T 3mog_A 151 -----------KLVEVVSGLATAAEVVEQLCELTLSWGKQPV----RCHSTP--GF---IVNRVARPYYSEAWRALEEQV 210 (483)
T ss_dssp -----------CEEEEEECSSCCHHHHHHHHHHHHHTTCEEE----EEESCT--TT---THHHHTHHHHHHHHHHHHTTC
T ss_pred -----------CeEEEecCCCCCHHHHHHHHHHHHHhCCEEE----EEeccC--cc---hHHHHHHHHHHHHHHHHHhCC
Confidence 2233566778899999999999999997411 111111 12 222333335666666666777
Q ss_pred CCHHHHHHHHHHHH---HHHHHHHHHHhcHHHHHH
Q 007987 328 MNEDLAYKNTVECI---TGIISKIISTQGMLAVYN 359 (582)
Q Consensus 328 l~pe~Ay~~~~~ei---~glia~lI~e~Gi~~m~d 359 (582)
.++++..+..-... .| --.++-..|++..+.
T Consensus 211 ~~~~~id~a~~~~~G~p~G-P~~l~D~~Gld~~~~ 244 (483)
T 3mog_A 211 AAPEVIDAALRDGAGFPMG-PLELTDLIGQDVNFA 244 (483)
T ss_dssp SCHHHHHHHHHHTTCCSSC-HHHHHHHHCHHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCC-HHHHHHHhchHHHHH
Confidence 77876555322110 02 234445556654444
No 35
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.38 E-value=2.5e-12 Score=130.15 Aligned_cols=197 Identities=15% Similarity=0.107 Sum_probs=125.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEecc-chh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS-DAA 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVP-d~a 190 (582)
++|+|||+|.||.++|.+|.+. |++|++.+++..+ .+...+.|+.. ..+..++++++|+||+++| +..
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~------g~~V~~~~~~~~~-~~~~~~~g~~~----~~~~~~~~~~~DvVi~av~~~~~ 99 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM------GHTVTVWNRTAEK-CDLFIQEGARL----GRTPAEVVSTCDITFACVSDPKA 99 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEECSSGGG-GHHHHHTTCEE----CSCHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEcccHHHHHHHHHHHhC------CCEEEEEeCCHHH-HHHHHHcCCEE----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 7899999999999999999988 8888776665443 44555678764 5678899999999999999 666
Q ss_pred HHHHHHH---HHhcCCCCcEEEEecCch---hhhhhcccccC-CCCCcEEEecc--CCChhhHHHHHhhcccccCCCceE
Q 007987 191 QADNYEK---IFSCMKPNSILGLSHGFL---LGHLQSMGLDF-PKNIGVIAVCP--KGMGPSVRRLYVQGKEINGAGINS 261 (582)
Q Consensus 191 ~~~Vl~e---I~~~Lk~GaiL~~a~G~~---i~~~~~~~i~~-p~dv~VI~v~P--ngpg~~vR~ly~~G~e~~G~Gv~a 261 (582)
..+++.+ +.+.++++++|++++... ...+.+ .+ ..++.++.. | ++|... +.|...
T Consensus 100 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~---~~~~~~~~~v~~-p~~g~~~~~------------~~g~~~ 163 (316)
T 2uyy_A 100 AKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQ---VIVSRGGRFLEA-PVSGNQQLS------------NDGMLV 163 (316)
T ss_dssp HHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHH---HHHHTTCEEEEC-CEESCHHHH------------HHTCEE
T ss_pred HHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCEEEEc-CccCChhHH------------hhCCEE
Confidence 7778875 347889999888766543 222222 12 235666643 4 222222 234544
Q ss_pred EEeeccCCCHHHHHHHHHHHHHhCCCcccccccccc-ccccchhhhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 007987 262 SFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQE-YRSDIFGERILLGAVHGIVESLFRRFTENGMNEDLAYKNTVEC 340 (582)
Q Consensus 262 liAv~qd~tgeale~alala~aiG~~~~iettf~~E-~~sDlfgEqvLsG~~pAlieAl~d~lVe~Gl~pe~Ay~~~~~e 340 (582)
++. .. +.+..+.+..++..+|............ ..-.++. .++|+..+++.-+...+.+.|++++.++....+.
T Consensus 164 ~~~-~g--~~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n--~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~ 238 (316)
T 2uyy_A 164 ILA-AG--DRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVN--MVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQG 238 (316)
T ss_dssp EEE-EE--CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHS
T ss_pred EEe-CC--CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcC
Confidence 343 33 4688899999999999641111010000 0001111 4555555544444445899999998877655443
No 36
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.38 E-value=1.7e-12 Score=129.28 Aligned_cols=152 Identities=13% Similarity=0.038 Sum_probs=110.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchhH
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a~ 191 (582)
+||+|||+|+||.++|++|++. |++|+..++. ++ ++++| ||++|++.+
T Consensus 7 mkI~IIG~G~~G~sLA~~L~~~------G~~V~~~~~~-----------------------~~-~~~aD--ilavP~~ai 54 (232)
T 3dfu_A 7 LRVGIFDDGSSTVNMAEKLDSV------GHYVTVLHAP-----------------------ED-IRDFE--LVVIDAHGV 54 (232)
T ss_dssp CEEEEECCSCCCSCHHHHHHHT------TCEEEECSSG-----------------------GG-GGGCS--EEEECSSCH
T ss_pred cEEEEEeeCHHHHHHHHHHHHC------CCEEEEecCH-----------------------HH-hccCC--EEEEcHHHH
Confidence 7899999999999999999999 9887544331 12 56789 999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCc-hhhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeeccCCC
Q 007987 192 ADNYEKIFSCMKPNSILGLSHGF-LLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVD 270 (582)
Q Consensus 192 ~~Vl~eI~~~Lk~GaiL~~a~G~-~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~t 270 (582)
.++++++.+++++|++|++++|. +...++. ..+.++.+|..||.. |.+..++.. +
T Consensus 55 ~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~---~~~~g~~fvg~HPm~------------------g~~~~i~a~---d 110 (232)
T 3dfu_A 55 EGYVEKLSAFARRGQMFLHTSLTHGITVMDP---LETSGGIVMSAHPIG------------------QDRWVASAL---D 110 (232)
T ss_dssp HHHHHHHHTTCCTTCEEEECCSSCCGGGGHH---HHHTTCEEEEEEEEE------------------TTEEEEEES---S
T ss_pred HHHHHHHHHhcCCCCEEEEECCcCHHHHHHH---HHhCCCcEEEeeeCC------------------CCceeeeCC---C
Confidence 99999999999999999987664 3333322 123578899999942 344444433 5
Q ss_pred HHHHHHHHHHHHHhCCCccccccccccccccchhhh-hhhchHHHHHHHHHHHH
Q 007987 271 GRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER-ILLGAVHGIVESLFRRF 323 (582)
Q Consensus 271 geale~alala~aiG~~~~iettf~~E~~sDlfgEq-vLsG~~pAlieAl~d~l 323 (582)
.++++.++.++..+|+. .......+-|.|++. ..++.+.+++..+.+.+
T Consensus 111 ~~a~~~l~~L~~~lG~~----vv~~~~~~hd~~~AAvsh~nhLv~L~~~A~~ll 160 (232)
T 3dfu_A 111 ELGETIVGLLVGELGGS----IVEIADDKRAQLAAALTYAGFLSTLQRDASYFL 160 (232)
T ss_dssp HHHHHHHHHHHHHTTCE----ECCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCE----EEEeCHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999985 222334556677765 45666666666555555
No 37
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.38 E-value=2.9e-12 Score=129.71 Aligned_cols=193 Identities=17% Similarity=0.166 Sum_probs=124.5
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch-h
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~-a 190 (582)
+||+|||+|+||.++|.+|.+. |++|++++++ ....+...+.|... ...+++|+++++|+||+++|+. .
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~---~~~~~~e~~~~aDvvi~~vp~~~~ 77 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRA------GLSTWGADLN-PQACANLLAEGACG---AAASAREFAGVVDALVILVVNAAQ 77 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCSE---EESSSTTTTTTCSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHcCCcc---ccCCHHHHHhcCCEEEEECCCHHH
Confidence 6899999999999999999999 9998777654 34455666667652 0357889999999999999986 4
Q ss_pred HHHHH---HHHHhcCCCCcEEEEecCchhhh---hhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEe
Q 007987 191 QADNY---EKIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (582)
Q Consensus 191 ~~~Vl---~eI~~~Lk~GaiL~~a~G~~i~~---~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliA 264 (582)
...++ +++.+.+++|++|++.+...... +.+ .....++.++. +|...+... -. .|...+++
T Consensus 78 ~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~~---a~-------~g~l~~~~ 144 (303)
T 3g0o_A 78 VRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAA--ALTALNLNMLD-APVSGGAVK---AA-------QGEMTVMA 144 (303)
T ss_dssp HHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHH--HHHTTTCEEEE-CCEESCHHH---HH-------TTCEEEEE
T ss_pred HHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHH--HHHHcCCeEEe-CCCCCChhh---hh-------cCCeEEEe
Confidence 56676 67889999999998887664322 211 11124677776 784433331 11 34545344
Q ss_pred eccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh--hhhchHHH----HHHHHHHHHHHcCCCHHHHHHH
Q 007987 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER--ILLGAVHG----IVESLFRRFTENGMNEDLAYKN 336 (582)
Q Consensus 265 v~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq--vLsG~~pA----lieAl~d~lVe~Gl~pe~Ay~~ 336 (582)
.. +.+..+.++.+++.+|... +.. .+. . -.++. .+.+...+ ++-.++..+.+.|++++..+..
T Consensus 145 -gg--~~~~~~~~~~ll~~~g~~~-~~~---~~~-~-g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~ 213 (303)
T 3g0o_A 145 -SG--SEAAFTRLKPVLDAVASNV-YRI---SDT-P-GAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDV 213 (303)
T ss_dssp -EC--CHHHHHHHHHHHHHHEEEE-EEE---ESS-T-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred -CC--CHHHHHHHHHHHHHHCCCE-EEC---CCC-C-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 33 5789999999999999641 111 000 0 00111 22333322 3333445677889998866554
No 38
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.34 E-value=7.9e-12 Score=126.44 Aligned_cols=187 Identities=14% Similarity=0.136 Sum_probs=123.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch-h
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~-a 190 (582)
++|+|||+|.||.++|++|.+. |++|++++++..+ .+.+.+.|+.. ..+++++++ +|+||+++|+. .
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~----~~~~~~~~~-aDvvi~~vp~~~~ 83 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEW------PGGVTVYDIRIEA-MTPLAEAGATL----ADSVADVAA-ADLIHITVLDDAQ 83 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTS------TTCEEEECSSTTT-SHHHHHTTCEE----CSSHHHHTT-SSEEEECCSSHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHCCCEE----cCCHHHHHh-CCEEEEECCChHH
Confidence 6899999999999999999998 9998877766544 45566678875 678999999 99999999965 5
Q ss_pred HHHHHHHHHhcCCCCcEEEEecCchhhh---hhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeecc
Q 007987 191 QADNYEKIFSCMKPNSILGLSHGFLLGH---LQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (582)
Q Consensus 191 ~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~---~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~q 267 (582)
..++++++.+.+++|++|++.+...... +.+ .....++.++. +|-..+.. .-.. |...++. ..
T Consensus 84 ~~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~--~~~~~g~~~~~-~pv~g~~~---~a~~-------g~l~~~~-gg 149 (296)
T 3qha_A 84 VREVVGELAGHAKPGTVIAIHSTISDTTAVELAR--DLKARDIHIVD-APVSGGAA---AAAR-------GELATMV-GA 149 (296)
T ss_dssp HHHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHH--HHGGGTCEEEE-CCEESCHH---HHHH-------TCEEEEE-EC
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHH--HHHHcCCEEEe-CCCcCCHH---HHhc-------CCccEEe-cC
Confidence 5678999999999999998887664322 211 01123566664 46333322 1122 3434333 33
Q ss_pred CCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh--hhhchHH----HHHHHHHHHHHHcCCCHHHH
Q 007987 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER--ILLGAVH----GIVESLFRRFTENGMNEDLA 333 (582)
Q Consensus 268 d~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq--vLsG~~p----AlieAl~d~lVe~Gl~pe~A 333 (582)
+.+..+.+..+++.+|... +.. .... -++. .+.+... +++--++..+.+.|++++..
T Consensus 150 --~~~~~~~~~~ll~~~g~~~-~~~---g~~g---~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~ 212 (296)
T 3qha_A 150 --DREVYERIKPAFKHWAAVV-IHA---GEPG---AGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQAL 212 (296)
T ss_dssp --CHHHHHHHHHHHHHHEEEE-EEE---ESTT---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred --CHHHHHHHHHHHHHHcCCe-EEc---CChh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 5789999999999999641 111 0000 0111 2223333 23444555677899998866
No 39
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.34 E-value=1.9e-12 Score=129.21 Aligned_cols=194 Identities=15% Similarity=0.059 Sum_probs=119.5
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch-h
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~-a 190 (582)
++|+|||+|+||.+++.+|.+. |++|++.+++. ...+...+.|+.. ..+++++++++|+||+++|+. .
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~------g~~V~~~~~~~-~~~~~~~~~g~~~----~~~~~~~~~~~Dvvi~~vp~~~~ 69 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH------GYPLIIYDVFP-DACKEFQDAGEQV----VSSPADVAEKADRIITMLPTSIN 69 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT------TCCEEEECSST-HHHHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CeEEEEeccHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCee----cCCHHHHHhcCCEEEEeCCCHHH
Confidence 4799999999999999999988 88887766654 3355556668764 568889999999999999754 5
Q ss_pred HHHHHHH---HHhcCCCCcEEEEecCchhhhhhcccccCC-CCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeec
Q 007987 191 QADNYEK---IFSCMKPNSILGLSHGFLLGHLQSMGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (582)
Q Consensus 191 ~~~Vl~e---I~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p-~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~ 266 (582)
...++.+ +.+.+++|++|+..+|+.......-.-.++ .++. +|+.|...-..... .|...++ +.
T Consensus 70 ~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~----~~~~p~~~g~~~a~-------~~~~~~~-~~ 137 (296)
T 2gf2_A 70 AIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAV----FMDAPVSGGVGAAR-------SGNLTFM-VG 137 (296)
T ss_dssp HHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE----EEECCEESHHHHHH-------HTCEEEE-EE
T ss_pred HHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCE----EEEcCCCCChhHHh-------cCcEEEE-eC
Confidence 5677775 456788999888888886543321000111 2222 34444332111222 2444433 33
Q ss_pred cCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchH-----HHHHHHHHHHHHHcCCCHHHHHHH
Q 007987 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAV-----HGIVESLFRRFTENGMNEDLAYKN 336 (582)
Q Consensus 267 qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~-----pAlieAl~d~lVe~Gl~pe~Ay~~ 336 (582)
. +.+..+.+..++..+|... +.+... -....+. .+.+.. ..+.|++. .+.+.|++++.++..
T Consensus 138 ~--~~~~~~~v~~l~~~~g~~~-~~~~~~--g~~~~~k--l~~n~~~~~~~~~~~Ea~~-~~~~~G~~~~~~~~~ 204 (296)
T 2gf2_A 138 G--VEDEFAAAQELLGCMGSNV-VYCGAV--GTGQAAK--ICNNMLLAISMIGTAEAMN-LGIRLGLDPKLLAKI 204 (296)
T ss_dssp S--CGGGHHHHHHHHTTTEEEE-EEEEST--THHHHHH--HHHHHHHHHHHHHHHHHHH-HHHHTTCCHHHHHHH
T ss_pred C--CHHHHHHHHHHHHHHcCCe-EEeCCc--cHHHHHH--HHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHH
Confidence 3 5788899999999999641 111100 0000110 122222 23455554 888999998866654
No 40
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.33 E-value=4.5e-12 Score=129.30 Aligned_cols=151 Identities=13% Similarity=0.109 Sum_probs=100.9
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchhH
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a~ 191 (582)
+||||||+|+||.+||+||.++ |++|++++|+.++ .+...+.|... +.++.|+++++|+||+++|+..+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~------G~~V~v~dr~~~~-~~~l~~~G~~~----~~s~~e~~~~~dvvi~~l~~~~~ 74 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA------GYELVVWNRTASK-AEPLTKLGATV----VENAIDAITPGGIVFSVLADDAA 74 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEC--------CTTTTTTCEE----CSSGGGGCCTTCEEEECCSSHHH
T ss_pred CcEEEEecHHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHHcCCeE----eCCHHHHHhcCCceeeeccchhh
Confidence 5899999999999999999999 9999887776444 44455678876 67899999999999999998876
Q ss_pred H-HHH-HHHHhcCCCCcEEEEecCchhhhhhc-ccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeeccC
Q 007987 192 A-DNY-EKIFSCMKPNSILGLSHGFLLGHLQS-MGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQD 268 (582)
Q Consensus 192 ~-~Vl-~eI~~~Lk~GaiL~~a~G~~i~~~~~-~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd 268 (582)
. +++ .++.+.+++|+++++.+-.......+ .......++.++ =+|-.-+.. .=+ .|... +.+..
T Consensus 75 ~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~l-dapVsGg~~---~a~-------~g~l~-im~gG- 141 (297)
T 4gbj_A 75 VEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYV-GAPIFARPE---AVR-------AKVGN-ICLSG- 141 (297)
T ss_dssp HHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE-ECCEECCHH---HHH-------HTCCE-EEEEE-
T ss_pred HHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCcee-cCCcCCCcc---ccc-------cccce-eeccc-
Confidence 4 454 46888999999998887554221111 001122466666 345222221 011 23333 23333
Q ss_pred CCHHHHHHHHHHHHHhCCC
Q 007987 269 VDGRATNVALGWSVALGSP 287 (582)
Q Consensus 269 ~tgeale~alala~aiG~~ 287 (582)
+.++.+.++.+++.+|..
T Consensus 142 -~~~~~~~~~~~l~~~g~~ 159 (297)
T 4gbj_A 142 -NAGAKERIKPIVENFVKG 159 (297)
T ss_dssp -CHHHHHHHHHHHHTTCSE
T ss_pred -chhHHHHHHHHHHHhhCC
Confidence 568999999999999974
No 41
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.33 E-value=7.4e-12 Score=125.14 Aligned_cols=196 Identities=15% Similarity=0.186 Sum_probs=122.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch-h
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~-a 190 (582)
++|+|||+|.||.+++.+|.+. |++|.+.+++ ....+...+.|+.. ..+++++++++|+||+++|+. .
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~v~~~~~ 74 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA------GYSLVVSDRN-PEAIADVIAAGAET----ASTAKAIAEQCDVIITMLPNSPH 74 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred ceEEEECchHHHHHHHHHHHhC------CCEEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 5899999999999999999988 8888666554 33455555668774 568889999999999999954 4
Q ss_pred HHHHH---HHHHhcCCCCcEEEEec-Cch--hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEe
Q 007987 191 QADNY---EKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFA 264 (582)
Q Consensus 191 ~~~Vl---~eI~~~Lk~GaiL~~a~-G~~--i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliA 264 (582)
...++ +++.+.+++|++|++.+ |.. ...+.+ .....++.++.. |..++... ... .+... ++
T Consensus 75 ~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~~~-pv~~~~~~---~~~------~~~~~-~~ 141 (299)
T 1vpd_A 75 VKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISD--ALKAKGVEMLDA-PVSGGEPK---AID------GTLSV-MV 141 (299)
T ss_dssp HHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHH--HHHTTTCEEEEC-CEESHHHH---HHH------TCEEE-EE
T ss_pred HHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCeEEEe-cCCCCHhH---Hhc------CCEEE-Ee
Confidence 56677 57888999999877554 432 223322 111235666654 54433321 112 13343 33
Q ss_pred eccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHH-HHHHHHHH---HHHcCCCHHHHHHHHHH
Q 007987 265 VHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHG-IVESLFRR---FTENGMNEDLAYKNTVE 339 (582)
Q Consensus 265 v~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pA-lieAl~d~---lVe~Gl~pe~Ay~~~~~ 339 (582)
.. +.+..+.+..++..+|... ....+.....+.- .+.+...+ ++.++.|. +.+.|++++.++....+
T Consensus 142 -~~--~~~~~~~~~~ll~~~g~~~----~~~~~~~~~~~~K-l~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~ 212 (299)
T 1vpd_A 142 -GG--DKAIFDKYYDLMKAMAGSV----VHTGDIGAGNVTK-LANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRG 212 (299)
T ss_dssp -ES--CHHHHHHHHHHHHTTEEEE----EEEESTTHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTT
T ss_pred -CC--CHHHHHHHHHHHHHHcCCe----EEeCCcCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHc
Confidence 22 6788999999999999631 1111111111100 22333332 23444444 78899999877665443
No 42
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.33 E-value=5.1e-12 Score=120.24 Aligned_cols=176 Identities=13% Similarity=0.056 Sum_probs=121.4
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcC-------ceecCCCcCCHHhhhccCCeEE
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G-------~~~~d~t~~~~~Eav~~ADIVI 183 (582)
+||+||| +|.||.+++..|.+. |++|++.+|+..+..+.....| +. ..+..++++++|+||
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~D~Vi 69 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL------GHEIVVGSRREEKAEAKAAEYRRIAGDASIT-----GMKNEDAAEACDIAV 69 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT------TCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-----EEEHHHHHHHCSEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHhccccccCCCC-----hhhHHHHHhcCCEEE
Confidence 4799999 999999999999988 8888877765433222222223 22 346778899999999
Q ss_pred EeccchhHHHHHHHHHhcCCCCcEEE-EecCch--------------hhhhhcccccCCCCCcEEEeccCCChhhHHHHH
Q 007987 184 LLISDAAQADNYEKIFSCMKPNSILG-LSHGFL--------------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (582)
Q Consensus 184 LaVPd~a~~~Vl~eI~~~Lk~GaiL~-~a~G~~--------------i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly 248 (582)
+++|+....++++++.+.++ +++|+ .+.|+. ...+.+ .+| +..++.+||+.|+.......
T Consensus 70 ~~~~~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~---~~~-~~~~v~~~~~~~~~~~~~~~ 144 (212)
T 1jay_A 70 LTIPWEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAE---VLE-SEKVVSALHTIPAARFANLD 144 (212)
T ss_dssp ECSCHHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHH---HHT-CSCEEECCTTCCHHHHHCTT
T ss_pred EeCChhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHH---hCC-CCeEEEEccchHHHHhhCcC
Confidence 99999998899998888774 77665 555676 344543 334 47899999999988742111
Q ss_pred hhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHh-CCCccccccccccccccchhhh-hhhchHHHHHHHHHH
Q 007987 249 VQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYRSDIFGER-ILLGAVHGIVESLFR 321 (582)
Q Consensus 249 ~~G~e~~G~Gv~aliAv~qd~tgeale~alala~ai-G~~~~iettf~~E~~sDlfgEq-vLsG~~pAlieAl~d 321 (582)
+.|-..+++... +.++.+.+..+++.+ |.. ..... + .+.. .+-++.|+++...++
T Consensus 145 -------~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~----~~~~~----~-~~~a~~~k~~~~~~~~~~~~ 201 (212)
T 1jay_A 145 -------EKFDWDVPVCGD--DDESKKVVMSLISEIDGLR----PLDAG----P-LSNSRLVESLTPLILNIMRF 201 (212)
T ss_dssp -------CCCCEEEEEEES--CHHHHHHHHHHHHHSTTEE----EEEEE----S-GGGHHHHHTHHHHHHHHHHH
T ss_pred -------CCCCccEEEECC--cHHHHHHHHHHHHHcCCCC----ceecc----c-hhHHHHhcchHHHHHHHHHH
Confidence 123333344443 578999999999999 863 11111 1 2333 678888888776663
No 43
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.33 E-value=9.6e-12 Score=135.68 Aligned_cols=147 Identities=17% Similarity=0.064 Sum_probs=104.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-----cCceecCCCcCCHHhhhcc---CCeEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----AGFTEENGTLGDIYETISG---SDLVL 183 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-----~G~~~~d~t~~~~~Eav~~---ADIVI 183 (582)
++|||||+|+||.++|++|.+. |++|.+.+|+.++ .+...+ .|+.. ..++++++++ +|+||
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~dr~~~~-~~~l~~~~~~~~gi~~----~~s~~e~v~~l~~aDvVi 79 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADH------GFTVCAYNRTQSK-VDHFLANEAKGKSIIG----ATSIEDFISKLKRPRKVM 79 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSSHH-HHHHHHTTTTTSSEEC----CSSHHHHHHTSCSSCEEE
T ss_pred CCEEEEeeHHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHHcccccCCCeEE----eCCHHHHHhcCCCCCEEE
Confidence 6899999999999999999999 9998887776544 444444 47764 5688898887 99999
Q ss_pred Eeccc-hhHHHHHHHHHhcCCCCcEEEEecCchh---hhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCc
Q 007987 184 LLISD-AAQADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGI 259 (582)
Q Consensus 184 LaVPd-~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i---~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv 259 (582)
++||+ +...++++++.+++++|++|++.+.... ..+.+ . ....++.++ .+|-..+.. ... .|.
T Consensus 80 l~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~-~-l~~~g~~~v-~~pVsgg~~---~a~-------~G~ 146 (497)
T 2p4q_A 80 LLVKAGAPVDALINQIVPLLEKGDIIIDGGNSHFPDSNRRYE-E-LKKKGILFV-GSGVSGGEE---GAR-------YGP 146 (497)
T ss_dssp ECCCSSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH-H-HHHTTCEEE-EEEEESHHH---HHH-------HCC
T ss_pred EEcCChHHHHHHHHHHHHhCCCCCEEEECCCCChhHHHHHHH-H-HHHcCCcee-CCCcccChh---Hhh-------cCC
Confidence 99999 5778899999999999999887654321 22222 0 112356776 457333332 112 244
Q ss_pred eEEEeeccCCCHHHHHHHHHHHHHhCC
Q 007987 260 NSSFAVHQDVDGRATNVALGWSVALGS 286 (582)
Q Consensus 260 ~aliAv~qd~tgeale~alala~aiG~ 286 (582)
. +.+.. +.++.+.++.++..+|.
T Consensus 147 -~-im~gg--~~e~~~~v~~ll~~~g~ 169 (497)
T 2p4q_A 147 -S-LMPGG--SEEAWPHIKNIFQSISA 169 (497)
T ss_dssp -E-EEEEE--CGGGHHHHHHHHHHHSC
T ss_pred -e-EEecC--CHHHHHHHHHHHHHhcC
Confidence 3 33344 57889999999999996
No 44
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.32 E-value=1.3e-11 Score=133.89 Aligned_cols=149 Identities=14% Similarity=0.116 Sum_probs=105.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc---CceecCCCcCCHHhhhcc---CCeEEEe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~---G~~~~d~t~~~~~Eav~~---ADIVILa 185 (582)
++|+|||+|+||.++|++|.+. |++|.+.+|+.++..+...+. |+.. ..+++|++++ +|+||++
T Consensus 16 ~~IgvIGlG~MG~~lA~~La~~------G~~V~v~~r~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVil~ 85 (480)
T 2zyd_A 16 QQIGVVGMAVMGRNLALNIESR------GYTVSIFNRSREKTEEVIAENPGKKLVP----YYTVKEFVESLETPRRILLM 85 (480)
T ss_dssp BSEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHHHHHHHHHHSTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CeEEEEccHHHHHHHHHHHHhC------CCeEEEEeCCHHHHHHHHhhCCCCCeEE----eCCHHHHHhCCCCCCEEEEE
Confidence 7899999999999999999998 999888777644433333332 7764 5688898887 9999999
Q ss_pred ccc-hhHHHHHHHHHhcCCCCcEEEEec-Cch--hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceE
Q 007987 186 ISD-AAQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (582)
Q Consensus 186 VPd-~a~~~Vl~eI~~~Lk~GaiL~~a~-G~~--i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~a 261 (582)
||+ +...++++++.+.+++|++|++.+ |.. ...+.+ . ....++.++ .+|...+... .. .|. +
T Consensus 86 Vp~~~~v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~-~-l~~~g~~~v-~~pv~gg~~~---a~-------~g~-~ 151 (480)
T 2zyd_A 86 VKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNR-E-LSAEGFNFI-GTGVSGGEEG---AL-------KGP-S 151 (480)
T ss_dssp SCSSSHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH-H-HHHTTCEEE-EEEEESHHHH---HH-------HCC-E
T ss_pred CCCHHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH-H-HHHCCCCee-CCccccCHhH---Hh-------cCC-e
Confidence 999 577889999999999999887654 442 122222 1 112356776 4576444431 12 244 3
Q ss_pred EEeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 262 SFAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 262 liAv~qd~tgeale~alala~aiG~~ 287 (582)
+.+.. +.++.+.+..++..+|..
T Consensus 152 -i~~gg--~~~~~~~v~~ll~~~g~~ 174 (480)
T 2zyd_A 152 -IMPGG--QKEAYELVAPILTKIAAV 174 (480)
T ss_dssp -EEEES--CHHHHHHHHHHHHHHSCB
T ss_pred -EEecC--CHHHHHHHHHHHHHHhcc
Confidence 33344 578999999999999973
No 45
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.32 E-value=1.7e-11 Score=124.10 Aligned_cols=154 Identities=12% Similarity=0.076 Sum_probs=103.5
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecC-CcccHHHHHHcCceecC-------CCcC--CHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEEN-------GTLG--DIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~-~sks~~~A~~~G~~~~d-------~t~~--~~~Eav~~ADI 181 (582)
+||+|||+|+||.++|.+|.++ |++|++.++. +.+..+...+.|..... .... ++.++++++|+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~ 74 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN------GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEV 74 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH------CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCE
Confidence 4899999999999999999998 9988777661 23334555555531100 0123 56788899999
Q ss_pred EEEeccchhHHHHHHHHHhcCCCCcEEEEec-Cc------hhhhhhcccc--cCCC-CCcEEEeccCCChhhHHHHHhhc
Q 007987 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH-GF------LLGHLQSMGL--DFPK-NIGVIAVCPKGMGPSVRRLYVQG 251 (582)
Q Consensus 182 VILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~-G~------~i~~~~~~~i--~~p~-dv~VI~v~Pngpg~~vR~ly~~G 251 (582)
||+++|+....++++++.+ ++++++|++.. |+ ....+.+ .+ ..+. ..-.++.+|+.+...
T Consensus 75 vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~-~~~~~~g~~~~~~~~~~p~~~~~~-------- 144 (335)
T 1txg_A 75 VLLGVSTDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEA-VWRLKHDLRERTVAITGPAIAREV-------- 144 (335)
T ss_dssp EEECSCGGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHH-HHTTSTTCGGGEEEEESSCCHHHH--------
T ss_pred EEEcCChHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHH-HHHHhcCCCCcEEEEECCCcHHHH--------
Confidence 9999999999999999999 99999876554 87 2223322 01 1111 113567788764433
Q ss_pred ccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCC
Q 007987 252 KEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (582)
Q Consensus 252 ~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~ 286 (582)
+.|.+..+.+.. .+++..+.+..++...|.
T Consensus 145 ----~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~ 174 (335)
T 1txg_A 145 ----AKRMPTTVVFSS-PSESSANKMKEIFETEYF 174 (335)
T ss_dssp ----HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTE
T ss_pred ----HccCCcEEEEEe-CCHHHHHHHHHHhCCCcE
Confidence 245644344443 357788888999988885
No 46
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.31 E-value=5e-11 Score=121.27 Aligned_cols=198 Identities=15% Similarity=0.020 Sum_probs=123.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh-
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a- 190 (582)
++|+|||+|+||.++|++|.+. |++|++++++. ...+.+.+.|+.. ..+++++++++|+||+++|+..
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~------G~~V~~~dr~~-~~~~~~~~~g~~~----~~~~~e~~~~aDvVi~~vp~~~~ 78 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQ------GKRVAIWNRSP-GKAAALVAAGAHL----CESVKAALSASPATIFVLLDNHA 78 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSH-HHHHHHHHHTCEE----CSSHHHHHHHSSEEEECCSSHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHCCCee----cCCHHHHHhcCCEEEEEeCCHHH
Confidence 7899999999999999999999 99987776653 3455566668875 6789999999999999999876
Q ss_pred HHHHHH--HHHhcCCCCcEEEEecCchhh---hhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEee
Q 007987 191 QADNYE--KIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAV 265 (582)
Q Consensus 191 ~~~Vl~--eI~~~Lk~GaiL~~a~G~~i~---~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv 265 (582)
..+++. .+.+ +++|++|++++..... .+.+ . ....++.++.. |-..++.. . |.+-.. +.+
T Consensus 79 ~~~v~~~~~l~~-~~~g~ivid~st~~~~~~~~l~~-~-~~~~g~~~vda-pv~g~~~~-----~-----~~~~~~-i~~ 143 (306)
T 3l6d_A 79 THEVLGMPGVAR-ALAHRTIVDYTTNAQDEGLALQG-L-VNQAGGHYVKG-MIVAYPRN-----V-----GHRESH-SIH 143 (306)
T ss_dssp HHHHHTSTTHHH-HTTTCEEEECCCCCTTHHHHHHH-H-HHHTTCEEEEE-EEESCGGG-----T-----TCTTCE-EEE
T ss_pred HHHHhcccchhh-ccCCCEEEECCCCCHHHHHHHHH-H-HHHcCCeEEec-ccccCccc-----c-----cCCceE-EEE
Confidence 566776 5644 5789999888766422 1111 0 11246777763 53322211 0 222223 233
Q ss_pred ccCCCHHHHHHHHHHHHHhCCCccccccccccccc-cchhhhhhhchHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Q 007987 266 HQDVDGRATNVALGWSVALGSPFTFATTLEQEYRS-DIFGERILLGAVHGIVESLFRRFTENGMNEDLAYKNTVEC 340 (582)
Q Consensus 266 ~qd~tgeale~alala~aiG~~~~iettf~~E~~s-DlfgEqvLsG~~pAlieAl~d~lVe~Gl~pe~Ay~~~~~e 340 (582)
.. +.++.+.++.+++.+|.. ++....-++... -++. .++.+...++.| ++..+.+.|++++..+....+.
T Consensus 144 gg--~~~~~~~~~~ll~~lg~~-~~~~~~g~~~g~g~~~k-~~~~~~~~~~~E-a~~la~~~Gld~~~~~~~~~~~ 214 (306)
T 3l6d_A 144 TG--DREAFEQHRALLEGLAGH-TVFLPWDEALAFATVLH-AHAFAAMVTFFE-AVGAGDRFGLPVSKTARLLLET 214 (306)
T ss_dssp EE--CHHHHHHHHHHHHTTCSE-EEECCHHHHHHHHHHHH-HHHHHHHHHHHH-HHHHHHHTTCCHHHHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHHhcCC-EEEecCCCCccHHHHHH-HHHHHHHHHHHH-HHHHHHHcCCCHHHHHHHHHHh
Confidence 33 478999999999999763 111100000000 0000 012222222333 3446789999999988765544
No 47
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.31 E-value=9.9e-12 Score=127.31 Aligned_cols=143 Identities=13% Similarity=0.065 Sum_probs=96.9
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcC-----------ceecCCCcCCHHhhhccCC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-----------FTEENGTLGDIYETISGSD 180 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G-----------~~~~d~t~~~~~Eav~~AD 180 (582)
+||+|||+|+||.++|.+|.++ |++|.+.+|+..+ .+...+.| +.. ..++++ ++.+|
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~------G~~V~~~~r~~~~-~~~l~~~g~~~~~~~~~~~~~~----~~~~~~-~~~aD 82 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHEN------GEEVILWARRKEI-VDLINVSHTSPYVEESKITVRA----TNDLEE-IKKED 82 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHH-HHHHHHHSCBTTBTTCCCCSEE----ESCGGG-CCTTE
T ss_pred CcEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCHHH-HHHHHHhCCcccCCCCeeeEEE----eCCHHH-hcCCC
Confidence 7999999999999999999999 9998887775433 33334445 232 456777 88999
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEE-ecCchhhhhh---cc-cccCCCCCcEEEeccCCChhhHHHHHhhccccc
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGL-SHGFLLGHLQ---SM-GLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEIN 255 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~-a~G~~i~~~~---~~-~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~ 255 (582)
+||++||++...++++++.+ ++++|+. +.|+.....+ +. .-.++ ....++.+|+.+...
T Consensus 83 vVil~vk~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~-~~~~~~~~P~~~~~~------------ 146 (335)
T 1z82_A 83 ILVIAIPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG-CPYAVLSGPSHAEEV------------ 146 (335)
T ss_dssp EEEECSCGGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTC-CCEEEEESSCCHHHH------------
T ss_pred EEEEECCHHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcC-CceEEEECCccHHHH------------
Confidence 99999999888889887766 6776654 4487532111 00 00123 234778999987765
Q ss_pred CCCceEEEeeccCCCHHHHHHHHHHHHHhCC
Q 007987 256 GAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (582)
Q Consensus 256 G~Gv~aliAv~qd~tgeale~alala~aiG~ 286 (582)
+.|.+..+....+ + .+.+..++...|.
T Consensus 147 ~~g~~~~~~~g~~-~---~~~~~~ll~~~g~ 173 (335)
T 1z82_A 147 AKKLPTAVTLAGE-N---SKELQKRISTEYF 173 (335)
T ss_dssp HTTCCEEEEEEET-T---HHHHHHHHCCSSE
T ss_pred hCCCceEEEEEeh-h---HHHHHHHhCCCCE
Confidence 3566443444332 1 5677788887774
No 48
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.30 E-value=2.1e-11 Score=126.04 Aligned_cols=149 Identities=17% Similarity=0.142 Sum_probs=102.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcC--------------ceecCCCcCCHHhhhc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--------------FTEENGTLGDIYETIS 177 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G--------------~~~~d~t~~~~~Eav~ 177 (582)
++|+|||+|+||.++|.+|.++ |++|.+.+++.. ..+...+.| +.. ..++.++++
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 84 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKK------CREVCVWHMNEE-EVRLVNEKRENVLFLKGVQLASNITF----TSDVEKAYN 84 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTT------EEEEEEECSCHH-HHHHHHHHTBCTTTSTTCBCCTTEEE----ESCHHHHHT
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHcCcccccccccccccceee----eCCHHHHHc
Confidence 4899999999999999999988 888877666533 334444433 221 357888899
Q ss_pred cCCeEEEeccchhHHHHHHH----HHhcCCC-CcEEEEec-Cchhhhh---hcc-cccCCCCCcEEEeccCCChhhHHHH
Q 007987 178 GSDLVLLLISDAAQADNYEK----IFSCMKP-NSILGLSH-GFLLGHL---QSM-GLDFPKNIGVIAVCPKGMGPSVRRL 247 (582)
Q Consensus 178 ~ADIVILaVPd~a~~~Vl~e----I~~~Lk~-GaiL~~a~-G~~i~~~---~~~-~i~~p~dv~VI~v~Pngpg~~vR~l 247 (582)
++|+||+++|++...+++++ |.+++++ +++|+.+. |+..... .+. ...++.....++.+|+.+...
T Consensus 85 ~aDvVilav~~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~---- 160 (366)
T 1evy_A 85 GAEIILFVIPTQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEV---- 160 (366)
T ss_dssp TCSSEEECCCHHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHH----
T ss_pred CCCEEEECCChHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHH----
Confidence 99999999999988999998 9999988 88766554 8754211 000 002232223677888876544
Q ss_pred HhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHh
Q 007987 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL 284 (582)
Q Consensus 248 y~~G~e~~G~Gv~aliAv~qd~tgeale~alala~ai 284 (582)
+.|.+.++.+. ..+.+..+.+..++...
T Consensus 161 --------~~g~~~~~~~~-~~~~~~~~~v~~ll~~~ 188 (366)
T 1evy_A 161 --------ATGVFTCVSIA-SADINVARRLQRIMSTG 188 (366)
T ss_dssp --------HTTCCEEEEEE-CSSHHHHHHHHHHHSCT
T ss_pred --------HhCCceEEEEe-cCCHHHHHHHHHHhcCC
Confidence 24555534433 33567888889999988
No 49
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.29 E-value=1.1e-11 Score=122.83 Aligned_cols=190 Identities=12% Similarity=0.049 Sum_probs=118.8
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
|++|+|||+|.||.+++.+|.+ |++|++.+++..+ .+...+.|+.. .. ..++++++|+||+++|+..
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-------g~~V~~~~~~~~~-~~~~~~~g~~~----~~-~~~~~~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-------RFPTLVWNRTFEK-ALRHQEEFGSE----AV-PLERVAEARVIFTCLPTTR 67 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-------TSCEEEECSSTHH-HHHHHHHHCCE----EC-CGGGGGGCSEEEECCSSHH
T ss_pred CCeEEEEcccHHHHHHHHHHhC-------CCeEEEEeCCHHH-HHHHHHCCCcc----cC-HHHHHhCCCEEEEeCCChH
Confidence 4789999999999999999863 5677776665433 44444456653 23 6788899999999999776
Q ss_pred -HHHHHHHHHhcCCCCcEEEEecCch---hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeec
Q 007987 191 -QADNYEKIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVH 266 (582)
Q Consensus 191 -~~~Vl~eI~~~Lk~GaiL~~a~G~~---i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~ 266 (582)
...+++++.+.+++|++|++.+... ...+.+ .....++.++.. |..+++. .... |...+++ .
T Consensus 68 ~~~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~--~~~~~g~~~~~~-p~~~~~~---~~~~-------g~~~~~~-~ 133 (289)
T 2cvz_A 68 EVYEVAEALYPYLREGTYWVDATSGEPEASRRLAE--RLREKGVTYLDA-PVSGGTS---GAEA-------GTLTVML-G 133 (289)
T ss_dssp HHHHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHH--HHHTTTEEEEEC-CEESHHH---HHHH-------TCEEEEE-E
T ss_pred HHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH--HHHHcCCEEEEe-cCCCChh---HHhh-------CCeEEEE-C
Confidence 6678888999999999887665432 222322 112236778775 8655543 2222 4544344 3
Q ss_pred cCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHH----HHHHHHHH---HHHcCCCHHHHHHHHH
Q 007987 267 QDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHG----IVESLFRR---FTENGMNEDLAYKNTV 338 (582)
Q Consensus 267 qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pA----lieAl~d~---lVe~Gl~pe~Ay~~~~ 338 (582)
. +.+..+.+..++ .+|.. + ....+.. .+. .+..+.++ ++.++.|. +.+.|++++.++....
T Consensus 134 ~--~~~~~~~~~~ll-~~g~~-~---~~~~~~~---~~~-~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 201 (289)
T 2cvz_A 134 G--PEEAVERVRPFL-AYAKK-V---VHVGPVG---AGH-AVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVIN 201 (289)
T ss_dssp S--CHHHHHHHGGGC-TTEEE-E---EEEESTT---HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred C--CHHHHHHHHHHH-hhcCC-e---EEcCCCc---HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHH
Confidence 2 578888999999 99863 1 1111111 111 22222222 24555554 7889999986655433
No 50
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.28 E-value=7.4e-11 Score=123.46 Aligned_cols=171 Identities=15% Similarity=0.203 Sum_probs=114.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec---C-------CCcCCHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE---N-------GTLGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~---d-------~t~~~~~Eav~~ADI 181 (582)
+||+|||+|+||.++|..|.++ |++|.++.|+. ...+...+.|.... + ....+++++++++|+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~------G~~V~l~~r~~-~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARK------GQKVRLWSYES-DHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT------TCCEEEECSCH-HHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCE
T ss_pred CeEEEECccHHHHHHHHHHHHC------CCeEEEEeCCH-HHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCE
Confidence 7899999999999999999998 99887776643 33444444442100 0 013578889999999
Q ss_pred EEEeccchhHHHHHHHHHhcCCCCcEEE-EecCchhh------hhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccc
Q 007987 182 VLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLLG------HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (582)
Q Consensus 182 VILaVPd~a~~~Vl~eI~~~Lk~GaiL~-~a~G~~i~------~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~ 254 (582)
||++||++...+++++|.++++++++|+ .+.|+... .+.+ .+|...-.+...|+.....
T Consensus 103 VilaVp~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~---~l~~~~~~vlsgP~~a~ev----------- 168 (356)
T 3k96_A 103 ILIVVPSFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVAT---ELGQVPMAVISGPSLATEV----------- 168 (356)
T ss_dssp EEECCCHHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHH---HHCSCCEEEEESSCCHHHH-----------
T ss_pred EEECCCHHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHH---HcCCCCEEEEECccHHHHH-----------
Confidence 9999999999999999999999998754 56777643 2332 2333223567788765443
Q ss_pred cCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHH
Q 007987 255 NGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHG 314 (582)
Q Consensus 255 ~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pA 314 (582)
+.|.+..+.+.. .+.+..+.+..++...|. .-....|+.+.. ++|.+--
T Consensus 169 -~~g~pt~~via~-~~~~~~~~v~~lf~~~~~--------rv~~~~Di~g~e-~~galkN 217 (356)
T 3k96_A 169 -AANLPTAVSLAS-NNSQFSKDLIERLHGQRF--------RVYKNDDMIGVE-LCGSVKN 217 (356)
T ss_dssp -HTTCCEEEEEEE-SCHHHHHHHHHHHCCSSE--------EEEEESCHHHHH-HHHHHHH
T ss_pred -HcCCCeEEEEec-CCHHHHHHHHHHhCCCCe--------eEEEeCCHHHHH-HHHHHHH
Confidence 246666455443 245667777777776554 234456676654 4444433
No 51
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.28 E-value=2.4e-11 Score=124.32 Aligned_cols=191 Identities=17% Similarity=0.097 Sum_probs=122.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch-h
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA-A 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~-a 190 (582)
++|+|||+|.||.++|++|.+. |++|++++++ ....+...+.|+.. ..+++++++++|+||+++|+. .
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~------G~~V~~~dr~-~~~~~~l~~~g~~~----~~~~~e~~~~aDvVi~~vp~~~~ 100 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEA------GYALQVWNRT-PARAASLAALGATI----HEQARAAARDADIVVSMLENGAV 100 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTTCEE----ESSHHHHHTTCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHhC------CCeEEEEcCC-HHHHHHHHHCCCEe----eCCHHHHHhcCCEEEEECCCHHH
Confidence 8999999999999999999999 9998776654 33455566668775 678999999999999999965 5
Q ss_pred HHHHHH--HHHhcCCCCcEEEEecCchhhhhhc-ccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeecc
Q 007987 191 QADNYE--KIFSCMKPNSILGLSHGFLLGHLQS-MGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (582)
Q Consensus 191 ~~~Vl~--eI~~~Lk~GaiL~~a~G~~i~~~~~-~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~q 267 (582)
...++. ++.+.+++|++|++.+.......+. .......++.++. +|-..+.. .-.. |...+++ ..
T Consensus 101 ~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~---~a~~-------g~l~i~~-gg 168 (320)
T 4dll_A 101 VQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLD-TPVSGGTV---GAEQ-------GTLVIMA-GG 168 (320)
T ss_dssp HHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECHHH---HHHH-------TCEEEEE-ES
T ss_pred HHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEe-CCCcCCHh---HHhc-------CCeeEEe-CC
Confidence 567777 7888999999998887654321111 0001123566665 46433332 1122 3434333 33
Q ss_pred CCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh--hhhchHHH----HHHHHHHHHHHcCCCHHHHHH
Q 007987 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER--ILLGAVHG----IVESLFRRFTENGMNEDLAYK 335 (582)
Q Consensus 268 d~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq--vLsG~~pA----lieAl~d~lVe~Gl~pe~Ay~ 335 (582)
+.++.+.++.+++.+ .. ++... +. --++. .+.+...+ ++.-++..+.+.|++++..+.
T Consensus 169 --~~~~~~~~~~ll~~~-~~-~~~~g---~~---g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~ 232 (320)
T 4dll_A 169 --KPADFERSLPLLKVF-GR-ATHVG---PH---GSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKE 232 (320)
T ss_dssp --CHHHHHHHHHHHHHH-EE-EEEEE---ST---THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred --CHHHHHHHHHHHHhc-CC-EEEeC---Cc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 578999999999999 43 11111 11 11111 23333322 344445556788999886654
No 52
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.28 E-value=2.7e-11 Score=120.66 Aligned_cols=194 Identities=13% Similarity=0.070 Sum_probs=119.8
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
|++|+|||+|.||.+++.+|.+. |++|++.+ + ....+...+.|+.. ..+++++++++|+||+++|+..
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~-~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~ 70 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA------GHQLHVTT-I-GPVADELLSLGAVN----VETARQVTEFADIIFIMVPDTP 70 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT------TCEEEECC-S-SCCCHHHHTTTCBC----CSSHHHHHHTCSEEEECCSSHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCEEEEEc-C-HHHHHHHHHcCCcc----cCCHHHHHhcCCEEEEECCCHH
Confidence 47999999999999999999988 88887655 4 33344555557764 5678899999999999998877
Q ss_pred H-HHHHH---HHHhcCCCCcEEEEecCch---hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEE
Q 007987 191 Q-ADNYE---KIFSCMKPNSILGLSHGFL---LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (582)
Q Consensus 191 ~-~~Vl~---eI~~~Lk~GaiL~~a~G~~---i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~ali 263 (582)
+ ..++. ++.+.+++|++|++.+... ...+.+ . ....++.++ -.|...+.. .... |...++
T Consensus 71 ~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~-~-~~~~g~~~~-~~p~~~~~~---~a~~-------g~~~~~ 137 (295)
T 1yb4_A 71 QVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQ-R-VNEMGADYL-DAPVSGGEI---GARE-------GTLSIM 137 (295)
T ss_dssp HHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHH-H-HHTTTEEEE-ECCEESHHH---HHHH-------TCEEEE
T ss_pred HHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHH-H-HHHcCCeEE-EccCCCCHH---HHHc-------CCeEEE
Confidence 4 66777 7888899999877554332 223322 0 111345554 235433321 2222 454434
Q ss_pred eeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHH-HHHHHHHH---HHHcCCCHHHHHHHH
Q 007987 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHG-IVESLFRR---FTENGMNEDLAYKNT 337 (582)
Q Consensus 264 Av~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pA-lieAl~d~---lVe~Gl~pe~Ay~~~ 337 (582)
+ .. +.+..+.+..++..+|... ....+.......- .+.+...+ ++.++.|. +.+.|++++.++...
T Consensus 138 ~-~~--~~~~~~~~~~ll~~~g~~~----~~~~~~~~~~~~K-l~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~ 207 (295)
T 1yb4_A 138 V-GG--EQKVFDRVKPLFDILGKNI----TLVGGNGDGQTCK-VANQIIVALNIEAVSEALVFASKAGADPVRVRQAL 207 (295)
T ss_dssp E-ES--CHHHHHHHHHHHHHHEEEE----EEEESTTHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred E-CC--CHHHHHHHHHHHHHhcCCE----EEeCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3 33 6788899999999999631 1111111111000 23333333 23344444 788999987665543
No 53
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.28 E-value=1.1e-10 Score=119.57 Aligned_cols=148 Identities=9% Similarity=0.027 Sum_probs=104.0
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCC-------ceEEEEecCCcc----cHHHHHHcC--------------ceecC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGSR----SFAEARAAG--------------FTEEN 166 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G-------~~ViVg~r~~sk----s~~~A~~~G--------------~~~~d 166 (582)
+||+|||+|+||.++|.+|.++ | ++|.+.+++... ..+...+.+ +..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~------g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-- 80 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGN------AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA-- 80 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE--
T ss_pred CeEEEECCCHHHHHHHHHHHhc------CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE--
Confidence 6899999999999999999998 7 788777665430 233333322 221
Q ss_pred CCcCCHHhhhccCCeEEEeccchhHHHHHHHHHhcCCCCcEEE-EecCchh---------hhhhcccccCCCCCcEEEec
Q 007987 167 GTLGDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL---------GHLQSMGLDFPKNIGVIAVC 236 (582)
Q Consensus 167 ~t~~~~~Eav~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~-~a~G~~i---------~~~~~~~i~~p~dv~VI~v~ 236 (582)
..+++++++++|+||+++|++...+++++|.++++++++|+ .+.|+.+ ..+.+ .++. ...++.+
T Consensus 81 --~~~~~~~~~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~---~~~~-~~~v~~g 154 (354)
T 1x0v_A 81 --VPDVVQAAEDADILIFVVPHQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGE---RLGI-PMSVLMG 154 (354)
T ss_dssp --ESSHHHHHTTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHH---HHTC-CEEEEEC
T ss_pred --EcCHHHHHcCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHH---HcCC-CEEEEEC
Confidence 35678889999999999999999999999999999998765 4557652 11121 1232 2467889
Q ss_pred cCCChhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCC
Q 007987 237 PKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (582)
Q Consensus 237 Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~ 286 (582)
|+.+... +.|.+..+.+. ..+.+..+.+..++...|.
T Consensus 155 p~~a~~v------------~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~ 191 (354)
T 1x0v_A 155 ANIASEV------------ADEKFCETTIG-CKDPAQGQLLKELMQTPNF 191 (354)
T ss_dssp SCCHHHH------------HTTCCEEEEEE-CSSHHHHHHHHHHHCBTTE
T ss_pred CCcHHHH------------HhcCCceEEEE-ECCHHHHHHHHHHhCCCCE
Confidence 9886654 24565444443 3356788888889988885
No 54
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.28 E-value=2.9e-11 Score=124.03 Aligned_cols=186 Identities=15% Similarity=0.056 Sum_probs=116.0
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCC-ceEEEEecCCc------ccHHHHHHcCceecCCCcC-CHHhhhccCCeEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGS------RSFAEARAAGFTEENGTLG-DIYETISGSDLVL 183 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G-~~ViVg~r~~s------ks~~~A~~~G~~~~d~t~~-~~~Eav~~ADIVI 183 (582)
++|+|||+|+||.++|.+|.+. | ++|++++++.. ...+.+.+.|+ . . ++++++++||+||
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~------G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~-----~~s~~e~~~~aDvVi 92 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGR------NAARLAAYDLRFNDPAASGALRARAAELGV-E-----PLDDVAGIACADVVL 92 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECGGGGCTTTHHHHHHHHHHTTC-E-----EESSGGGGGGCSEEE
T ss_pred CeEEEECccHHHHHHHHHHHHc------CCCeEEEEeCCCccccchHHHHHHHHHCCC-C-----CCCHHHHHhcCCEEE
Confidence 7899999999999999999999 9 89887776531 23344455665 2 4 7789999999999
Q ss_pred EeccchhHHHHHHHHHhcCCCCcEEEEecCchhh---hhhcccccCCCCCcEEEeccC-CChhhHHHHHhhcccccCCCc
Q 007987 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPK-GMGPSVRRLYVQGKEINGAGI 259 (582)
Q Consensus 184 LaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~---~~~~~~i~~p~dv~VI~v~Pn-gpg~~vR~ly~~G~e~~G~Gv 259 (582)
+++|+....++++++.+.+++|++|++.++.... .+.+ . ....++.++- +|- +|... .. |-
T Consensus 93 ~avp~~~~~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~-~-l~~~g~~~~d-~pv~g~~~a-----~~-------g~ 157 (317)
T 4ezb_A 93 SLVVGAATKAVAASAAPHLSDEAVFIDLNSVGPDTKALAAG-A-IATGKGSFVE-GAVMARVPP-----YA-------EK 157 (317)
T ss_dssp ECCCGGGHHHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHH-H-HHTSSCEEEE-EEECSCSTT-----TG-------GG
T ss_pred EecCCHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH-H-HHHcCCeEEe-ccCCCCchh-----hc-------CC
Confidence 9999999999889999999999999888776422 2211 1 1123455543 231 12111 01 23
Q ss_pred eEEEeeccCCCHHHHHHHHHHHHHhCCCcccccc--ccccccccchhhhhhhchHHHHHHHHHHHHHHcCCCHH
Q 007987 260 NSSFAVHQDVDGRATNVALGWSVALGSPFTFATT--LEQEYRSDIFGERILLGAVHGIVESLFRRFTENGMNED 331 (582)
Q Consensus 260 ~aliAv~qd~tgeale~alala~aiG~~~~iett--f~~E~~sDlfgEqvLsG~~pAlieAl~d~lVe~Gl~pe 331 (582)
..+++...+ + +.++.+++.+|.. ++... ... -..-.+..+++.....+++--++..+.+.|++++
T Consensus 158 l~i~vgg~~---~--~~~~~ll~~~g~~-v~~~g~~~g~-a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~ 224 (317)
T 4ezb_A 158 VPILVAGRR---A--VEVAERLNALGMN-LEAVGETPGQ-ASSLKMIRSVMIKGVEALLIEALSSAERAGVTER 224 (317)
T ss_dssp SEEEEESTT---H--HHHHHHHHTTTCE-EEEEESSTTH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred EEEEEeCCh---H--HHHHHHHHHhCCC-eEEeCCCcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 333443332 2 7889999999964 11111 000 0000111112333333345555567778899884
No 55
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.27 E-value=1.3e-10 Score=121.01 Aligned_cols=149 Identities=11% Similarity=0.003 Sum_probs=103.5
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCC-------ceEEEEecCCc----ccHHHHHHcC--------------ceec
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD-------IVVKVGLRKGS----RSFAEARAAG--------------FTEE 165 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G-------~~ViVg~r~~s----ks~~~A~~~G--------------~~~~ 165 (582)
|+||+|||+|+||.++|.+|.++ | ++|++.+++.. +..+...+.+ +..
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~------G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~- 93 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN------AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVA- 93 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH------HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEE-
T ss_pred CCEEEEECcCHHHHHHHHHHHHc------CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEE-
Confidence 36899999999999999999988 7 78877776543 0233333322 221
Q ss_pred CCCcCCHHhhhccCCeEEEeccchhHHHHHHHHHh----cCCCCcEEEEe-cCchhh---------hhhcccccCCCCCc
Q 007987 166 NGTLGDIYETISGSDLVLLLISDAAQADNYEKIFS----CMKPNSILGLS-HGFLLG---------HLQSMGLDFPKNIG 231 (582)
Q Consensus 166 d~t~~~~~Eav~~ADIVILaVPd~a~~~Vl~eI~~----~Lk~GaiL~~a-~G~~i~---------~~~~~~i~~p~dv~ 231 (582)
..+++++++++|+||++||++...+++++|.+ +++++++|+.. .|+... .+.+ .++.+ -
T Consensus 94 ---~~~~~ea~~~aDvVilav~~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~---~~~~~-~ 166 (375)
T 1yj8_A 94 ---HSDLASVINDADLLIFIVPCQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISD---FLNIP-C 166 (375)
T ss_dssp ---ESSTHHHHTTCSEEEECCCHHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHH---HSSSC-E
T ss_pred ---ECCHHHHHcCCCEEEEcCCHHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHH---HcCCC-E
Confidence 35677889999999999999999999999999 99999877644 476531 1121 12322 3
Q ss_pred EEEeccCCChhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCC
Q 007987 232 VIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (582)
Q Consensus 232 VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~ 286 (582)
.++.+|+.+... +.|.+..+.+.. .+++..+.+..++...|.
T Consensus 167 ~v~~gp~~a~~v------------~~g~~~~~~~~~-~~~~~~~~v~~ll~~~g~ 208 (375)
T 1yj8_A 167 SALSGANIAMDV------------AMENFSEATIGG-NDKDSLVIWQRVFDLPYF 208 (375)
T ss_dssp EEEECSCCHHHH------------HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTE
T ss_pred EEEeCCchHHHH------------HhCCCeEEEEec-CCHHHHHHHHHHhCCCCe
Confidence 567889876544 245655444332 356788888888888775
No 56
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.27 E-value=5.7e-11 Score=116.81 Aligned_cols=183 Identities=16% Similarity=0.163 Sum_probs=109.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecC-CcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK-GSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~-~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
++|+|||+|+||.++|.+|.+. |++|++.++. ..+..+...+.|+. .+++++++++|+||+++|+..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~------g~~V~~~~~~~~~~~~~~~~~~g~~------~~~~~~~~~aDvvi~~v~~~~ 68 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR------GVEVVTSLEGRSPSTIERARTVGVT------ETSEEDVYSCPVVISAVTPGV 68 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT------TCEEEECCTTCCHHHHHHHHHHTCE------ECCHHHHHTSSEEEECSCGGG
T ss_pred CeEEEEechHHHHHHHHHHHHC------CCeEEEeCCccCHHHHHHHHHCCCc------CCHHHHHhcCCEEEEECCCHH
Confidence 4899999999999999999998 9888764331 22334445555654 356788899999999999998
Q ss_pred HHHHHHHHHhcCCCCcEEEEecCchh---hhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEEeecc
Q 007987 191 QADNYEKIFSCMKPNSILGLSHGFLL---GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQ 267 (582)
Q Consensus 191 ~~~Vl~eI~~~Lk~GaiL~~a~G~~i---~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~aliAv~q 267 (582)
+.+.+.++.+.+++ +|++.++... ..+.+ .+++. .++. +|-..++. .. +.|.+ +++...
T Consensus 69 ~~~~~~~~~~~~~~--~vi~~s~~~~~~~~~l~~---~~~~~-g~~~-~~v~~~~~---~~-------~~g~~-~~~~g~ 130 (264)
T 1i36_A 69 ALGAARRAGRHVRG--IYVDINNISPETVRMASS---LIEKG-GFVD-AAIMGSVR---RK-------GADIR-IIASGR 130 (264)
T ss_dssp HHHHHHHHHTTCCS--EEEECSCCCHHHHHHHHH---HCSSS-EEEE-EEECSCHH---HH-------GGGCE-EEEEST
T ss_pred HHHHHHHHHHhcCc--EEEEccCCCHHHHHHHHH---HHhhC-Ceee-eeeeCCcc---cc-------ccCCe-EEecCC
Confidence 87777888888877 7777766642 23333 23331 1332 34222211 11 23556 444333
Q ss_pred CCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh-hhhchHHH----HHHHHHHH---HHHcCCCHHHHHHHHHH
Q 007987 268 DVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER-ILLGAVHG----IVESLFRR---FTENGMNEDLAYKNTVE 339 (582)
Q Consensus 268 d~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq-vLsG~~pA----lieAl~d~---lVe~Gl~pe~Ay~~~~~ 339 (582)
+ . +.+.. ++.+|.. + ....| + .+.. .+..+.++ ++.++.|. +++.|++++ ++....+
T Consensus 131 ~---~--~~~~~-l~~~g~~-~---~~~~~---~-~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~ 195 (264)
T 1i36_A 131 D---A--EEFMK-LNRYGLN-I---EVRGR---E-PGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEY 195 (264)
T ss_dssp T---H--HHHHG-GGGGTCE-E---EECSS---S-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHT
T ss_pred c---H--HHhhh-HHHcCCe-e---EECCC---C-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHH
Confidence 2 1 66777 8899863 1 11111 1 2221 22222222 24445555 889999986 6655443
No 57
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.26 E-value=7.4e-11 Score=117.98 Aligned_cols=194 Identities=15% Similarity=0.079 Sum_probs=121.3
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh-
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA- 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a- 190 (582)
++|+|||+|.||.+++.+|.+. |++|++.+++ ....+...+.|+.. ..+.+++++++|+||+++|+..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~~~-~~~~~~~~~~g~~~----~~~~~~~~~~~D~vi~~vp~~~~ 73 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKE------GVTVYAFDLM-EANVAAVVAQGAQA----CENNQKVAAASDIIFTSLPNAGI 73 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHTTTCEE----CSSHHHHHHHCSEEEECCSSHHH
T ss_pred CEEEEECccHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHHCCCee----cCCHHHHHhCCCEEEEECCCHHH
Confidence 7899999999999999999988 8888766554 33344455557764 5688899999999999998655
Q ss_pred HHHHHH---HHHhcCCCCcEEEEe-cCc--hhhhhhcccccCC-CCCcEEEeccCCChhhHHHHHhhcccccCCCceEEE
Q 007987 191 QADNYE---KIFSCMKPNSILGLS-HGF--LLGHLQSMGLDFP-KNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (582)
Q Consensus 191 ~~~Vl~---eI~~~Lk~GaiL~~a-~G~--~i~~~~~~~i~~p-~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~ali 263 (582)
...++. ++.+.+++|++|+.. .|. ....+.+ .++ .++.++. +|..++.. .+.. |...++
T Consensus 74 ~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~---~~~~~g~~~~~-~p~~~~~~---~a~~-------g~~~~~ 139 (301)
T 3cky_A 74 VETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAK---VAAEKGIDYVD-APVSGGTK---GAEA-------GTLTIM 139 (301)
T ss_dssp HHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHH---HHHHTTCEEEE-CCEESHHH---HHHH-------TCEEEE
T ss_pred HHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHH---HHHHcCCeEEE-ccCCCCHH---HHHc-------CCeEEE
Confidence 566775 788899999987654 454 2333332 122 3566664 57555442 2222 443434
Q ss_pred eeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHH-HHHHHH---HHHHHcCCCHHHHHHHHH
Q 007987 264 AVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHG-IVESLF---RRFTENGMNEDLAYKNTV 338 (582)
Q Consensus 264 Av~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pA-lieAl~---d~lVe~Gl~pe~Ay~~~~ 338 (582)
+ .. +.+..+.+..++..+|.... ...+.......- .+.+...+ ++.++. ..+.+.|++++.++....
T Consensus 140 ~-~g--~~~~~~~v~~ll~~~g~~~~----~~~~~g~~~~~K-l~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~ 210 (301)
T 3cky_A 140 V-GA--SEAVFEKIQPVLSVIGKDIY----HVGDTGAGDAVK-IVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIG 210 (301)
T ss_dssp E-ES--CHHHHHHHHHHHHHHEEEEE----EEESTTHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred E-CC--CHHHHHHHHHHHHHhcCCEE----EeCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 4 33 67889999999999996411 011111100000 22222222 222333 337889999987665433
No 58
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.25 E-value=9.8e-11 Score=122.78 Aligned_cols=153 Identities=16% Similarity=0.099 Sum_probs=108.7
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccC---Ce
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGS---DL 181 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~A---DI 181 (582)
+-.+++ ++|+|||+|.||.++|++|.+. |++|++++++. ...+.+.+.|+.. ..+++|+++++ |+
T Consensus 17 ~~Mm~~-mkIgiIGlG~mG~~~A~~L~~~------G~~V~v~dr~~-~~~~~l~~~g~~~----~~s~~e~~~~a~~~Dv 84 (358)
T 4e21_A 17 NLYFQS-MQIGMIGLGRMGADMVRRLRKG------GHECVVYDLNV-NAVQALEREGIAG----ARSIEEFCAKLVKPRV 84 (358)
T ss_dssp -----C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHTTTCBC----CSSHHHHHHHSCSSCE
T ss_pred hhhhcC-CEEEEECchHHHHHHHHHHHhC------CCEEEEEeCCH-HHHHHHHHCCCEE----eCCHHHHHhcCCCCCE
Confidence 344566 8999999999999999999999 99987776653 4456666778774 57899999999 99
Q ss_pred EEEeccchhHHHHHHHHHhcCCCCcEEEEecCchhh---hhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCC
Q 007987 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (582)
Q Consensus 182 VILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~---~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~G 258 (582)
||+++|+....++++++.+.+++|++|++.+..... .+.+ .....++.++- +|-.-+.. .-+. |
T Consensus 85 Vi~~vp~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~--~l~~~g~~~vd-apVsGg~~---~a~~-------G 151 (358)
T 4e21_A 85 VWLMVPAAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRAD--QMRAQGITYVD-VGTSGGIF---GLER-------G 151 (358)
T ss_dssp EEECSCGGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHH--HHHTTTCEEEE-EEEECGGG---HHHH-------C
T ss_pred EEEeCCHHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHH--HHHHCCCEEEe-CCCCCCHH---HHhc-------C
Confidence 999999997788999999999999999888765421 1111 11234677764 35322222 1122 3
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHhCC
Q 007987 259 INSSFAVHQDVDGRATNVALGWSVALGS 286 (582)
Q Consensus 259 v~aliAv~qd~tgeale~alala~aiG~ 286 (582)
. + |.+.. +.++.+.++.+++.+|.
T Consensus 152 ~-~-im~GG--~~~a~~~~~~ll~~lg~ 175 (358)
T 4e21_A 152 Y-C-LMIGG--EKQAVERLDPVFRTLAP 175 (358)
T ss_dssp C-E-EEEES--CHHHHHHTHHHHHHHSC
T ss_pred C-e-eeecC--CHHHHHHHHHHHHHhcc
Confidence 3 3 44454 57899999999999994
No 59
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.25 E-value=1.6e-10 Score=124.90 Aligned_cols=149 Identities=13% Similarity=0.094 Sum_probs=104.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc---CceecCCCcCCHHhhhcc---CCeEEEe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GFTEENGTLGDIYETISG---SDLVLLL 185 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~---G~~~~d~t~~~~~Eav~~---ADIVILa 185 (582)
++|+|||+|+||.++|++|.+. |++|.+.+|+.++..+...+. |+.. ..++++++++ +|+||++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~------G~~V~v~dr~~~~~~~l~~~~~~~gi~~----~~s~~e~v~~l~~aDvVila 75 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR------GYTVAIYNRTTSKTEEVFKEHQDKNLVF----TKTLEEFVGSLEKPRRIMLM 75 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSCEEE----CSSHHHHHHTBCSSCEEEEC
T ss_pred CcEEEEeeHHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHhCcCCCeEE----eCCHHHHHhhccCCCEEEEE
Confidence 6899999999999999999998 998887776544333333332 6664 5688898876 9999999
Q ss_pred ccch-hHHHHHHHHHhcCCCCcEEEEec-Cch--hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceE
Q 007987 186 ISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINS 261 (582)
Q Consensus 186 VPd~-a~~~Vl~eI~~~Lk~GaiL~~a~-G~~--i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~a 261 (582)
||+. ...++++++.+.+++|++|++.+ |.. ...+.+ .....++.++ .+|...+... -. .|..
T Consensus 76 vp~~~~v~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~--~l~~~g~~~v-~~pv~gg~~~---a~-------~g~~- 141 (474)
T 2iz1_A 76 VQAGAATDATIKSLLPLLDIGDILIDGGNTHFPDTMRRNA--ELADSGINFI-GTGVSGGEKG---AL-------LGPS- 141 (474)
T ss_dssp CCTTHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH--HTTTSSCEEE-EEEECSHHHH---HH-------HCCC-
T ss_pred ccCchHHHHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHH--HHHHCCCeEE-CCCCCCChhh---hc-------cCCe-
Confidence 9995 66789999999999999887655 442 222322 1122466676 4686544431 12 2443
Q ss_pred EEeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 262 SFAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 262 liAv~qd~tgeale~alala~aiG~~ 287 (582)
++ +.. +.++.+.+..++..+|..
T Consensus 142 i~-~gg--~~~~~~~v~~ll~~~g~~ 164 (474)
T 2iz1_A 142 MM-PGG--QKEAYDLVAPIFEQIAAK 164 (474)
T ss_dssp EE-EEE--CHHHHHHHHHHHHHHSCB
T ss_pred EE-ecC--CHHHHHHHHHHHHHHhcc
Confidence 23 333 678999999999999974
No 60
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=99.22 E-value=8.4e-12 Score=136.89 Aligned_cols=167 Identities=19% Similarity=0.153 Sum_probs=119.8
Q ss_pred eecccccccc-ccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCH
Q 007987 94 VRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (582)
Q Consensus 94 ~~~~r~~f~~-~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~ 172 (582)
++.|+|.... ....+.| ++|||||+|+||.++|++|+.. |++|+++++.. +.+.+.+.|+.. .++
T Consensus 125 ~~~g~w~~~~~~~~~l~g-~~vgIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~--~~~~a~~~g~~~-----~~l 190 (529)
T 1ygy_A 125 LREHTWKRSSFSGTEIFG-KTVGVVGLGRIGQLVAQRIAAF------GAYVVAYDPYV--SPARAAQLGIEL-----LSL 190 (529)
T ss_dssp HHTTCCCGGGCCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTS--CHHHHHHHTCEE-----CCH
T ss_pred HHhCCCcccCcCccccCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEECCCC--ChhHHHhcCcEE-----cCH
Confidence 3456664321 2357899 9999999999999999999988 99887665543 345677788873 488
Q ss_pred HhhhccCCeEEEeccch-hHHHHHHH-HHhcCCCCcEEEEec-Cchh------hhhhcccccCCCCCcEEEeccCCChhh
Q 007987 173 YETISGSDLVLLLISDA-AQADNYEK-IFSCMKPNSILGLSH-GFLL------GHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 173 ~Eav~~ADIVILaVPd~-a~~~Vl~e-I~~~Lk~GaiL~~a~-G~~i------~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
++++++||+|++++|+. ....++.+ +.+.||+|++|++++ |-.+ ..+.++.+ -...++|+..||. +.+
T Consensus 191 ~e~~~~aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i-~ga~lDv~~~eP~-~~~- 267 (529)
T 1ygy_A 191 DDLLARADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHV-RAAGLDVFATEPC-TDS- 267 (529)
T ss_dssp HHHHHHCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSE-EEEEESSCSSSSC-SCC-
T ss_pred HHHHhcCCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCc-cEEEEeeccCCCC-CCc-
Confidence 99999999999999988 66677764 888999999988665 3221 11111111 0124678888894 322
Q ss_pred HHHHHhhcccccCCCceEEEeeccC-CCHHHHHH-----HHHHHHHhCCC
Q 007987 244 VRRLYVQGKEINGAGINSSFAVHQD-VDGRATNV-----ALGWSVALGSP 287 (582)
Q Consensus 244 vR~ly~~G~e~~G~Gv~aliAv~qd-~tgeale~-----alala~aiG~~ 287 (582)
.+|. +-+++++||.. .+.++.+. +..+...+++.
T Consensus 268 --~L~~--------~~~vilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~ 307 (529)
T 1ygy_A 268 --PLFE--------LAQVVVTPHLGASTAEAQDRAGTDVAESVRLALAGE 307 (529)
T ss_dssp --GGGG--------CTTEEECSSCSSCBHHHHHHHHHHHHHHHHHHHTTC
T ss_pred --hHHh--------CCCEEEccccCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 2444 46888999987 77888775 77888888874
No 61
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.22 E-value=2.3e-10 Score=129.79 Aligned_cols=148 Identities=10% Similarity=0.081 Sum_probs=109.9
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHH-----------HHcCc-------------eecC
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-----------RAAGF-------------TEEN 166 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A-----------~~~G~-------------~~~d 166 (582)
+++|+|||+|.||.++|.+|.++ |++|++.+++.+ ..+.+ .+.|. ..
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~-~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~-- 384 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSASK------GTPILMKDINEH-GIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP-- 384 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT------TCCEEEECSSHH-HHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE--
T ss_pred CCEEEEECCChhhHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEE--
Confidence 58899999999999999999999 999887766533 23322 22342 21
Q ss_pred CCcCCHHhhhccCCeEEEeccchhH--HHHHHHHHhcCCCCcEEE-EecCchhhhhhcccccCCCCCcEEEeccCCChhh
Q 007987 167 GTLGDIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 167 ~t~~~~~Eav~~ADIVILaVPd~a~--~~Vl~eI~~~Lk~GaiL~-~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
..++ +++++||+||+++|+... ..++.++.++++++++|+ .++++.+..+.+ .....-+|+..||..|.+.
T Consensus 385 --~~d~-~~~~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~~~~~ig~hf~~P~~~ 458 (715)
T 1wdk_A 385 --TLSY-GDFGNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAK---ALKRPENFVGMHFFNPVHM 458 (715)
T ss_dssp --ESSS-TTGGGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGG---GCSCGGGEEEEECCSSTTT
T ss_pred --ECCH-HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHH---HhcCccceEEEEccCCccc
Confidence 3455 678999999999997763 468889999999999875 567887766644 2333347999999887665
Q ss_pred HHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 244 VRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 244 vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~ 287 (582)
+-...+.++...+++.++.+..+++.+|..
T Consensus 459 --------------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~ 488 (715)
T 1wdk_A 459 --------------MPLVEVIRGEKSSDLAVATTVAYAKKMGKN 488 (715)
T ss_dssp --------------CCEEEEEECSSCCHHHHHHHHHHHHHTTCE
T ss_pred --------------CceEEEEECCCCCHHHHHHHHHHHHHhCCE
Confidence 122334557778899999999999999974
No 62
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.22 E-value=4.6e-11 Score=129.44 Aligned_cols=148 Identities=17% Similarity=0.052 Sum_probs=103.5
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-----cCceecCCCcCCHHhhhc---cCCeEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----AGFTEENGTLGDIYETIS---GSDLVL 183 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-----~G~~~~d~t~~~~~Eav~---~ADIVI 183 (582)
++|+|||+|.||.++|.+|.+. |++|.+.+|+.++ .+...+ .|+.. ..+++++++ ++|+||
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~-~~~l~~~~~~g~gi~~----~~~~~e~v~~l~~aDvVi 71 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVSK-VDDFLANEAKGTKVLG----AHSLEEMVSKLKKPRRII 71 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTHH-HHHHHHTTTTTSSCEE----CSSHHHHHHHBCSSCEEE
T ss_pred CeEEEEChHHHHHHHHHHHHHC------CCeEEEEeCCHHH-HHHHHhccccCCCeEE----eCCHHHHHhhccCCCEEE
Confidence 5799999999999999999998 9988877776544 444444 56654 568888874 899999
Q ss_pred Eeccch-hHHHHHHHHHhcCCCCcEEEEec-Cchh--hhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCc
Q 007987 184 LLISDA-AQADNYEKIFSCMKPNSILGLSH-GFLL--GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGI 259 (582)
Q Consensus 184 LaVPd~-a~~~Vl~eI~~~Lk~GaiL~~a~-G~~i--~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv 259 (582)
++||+. ...++++++.+++++|++|++.+ |... ..+.+ . ....++.++ .+|...+... -. .|.
T Consensus 72 laVp~~~~v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~-~-l~~~g~~~v-~~pv~g~~~~---a~-------~g~ 138 (482)
T 2pgd_A 72 LLVKAGQAVDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCR-D-LKDKGILFV-GSGVSGGEDG---AR-------YGP 138 (482)
T ss_dssp ECSCTTHHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHH-H-HHHTTCEEE-EEEEESHHHH---HH-------HCC
T ss_pred EeCCChHHHHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHH-H-HHHcCCeEe-CCCCCCChhh---hc-------cCC
Confidence 999996 67889999999999999887654 4431 12222 1 112356676 4676444331 11 344
Q ss_pred eEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 260 NSSFAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 260 ~aliAv~qd~tgeale~alala~aiG~~ 287 (582)
.+ .+.. +.++.+.+..++..+|..
T Consensus 139 -~i-~~gg--~~e~~~~v~~ll~~~g~~ 162 (482)
T 2pgd_A 139 -SL-MPGG--NKEAWPHIKAIFQGIAAK 162 (482)
T ss_dssp -EE-EEEE--CTTTHHHHHHHHHHHSCB
T ss_pred -eE-EeCC--CHHHHHHHHHHHHHhhhh
Confidence 32 3333 357888999999999974
No 63
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.85 E-value=1.2e-12 Score=126.54 Aligned_cols=151 Identities=14% Similarity=0.090 Sum_probs=104.9
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEecc
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVP 187 (582)
+++ ++|+|||+|+||.+++.+|.+. |++|++.+|... .+.....|+. ..+..++++++|+||+++|
T Consensus 17 ~~~-~~I~iIG~G~mG~~la~~L~~~------G~~V~~~~r~~~--~~~~~~~g~~-----~~~~~~~~~~aDvVilav~ 82 (201)
T 2yjz_A 17 EKQ-GVVCIFGTGDFGKSLGLKMLQC------GYSVVFGSRNPQ--VSSLLPRGAE-----VLCYSEAASRSDVIVLAVH 82 (201)
Confidence 456 8999999999999999999988 888877666533 2333334655 2377888999999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE-EecCch--------hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCC
Q 007987 188 DAAQADNYEKIFSCMKPNSILG-LSHGFL--------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~-~a~G~~--------i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~G 258 (582)
++...+++ ++.+ ++++++|+ .+.|+. ..++++ .++. .++|+++||+|.......-..| .
T Consensus 83 ~~~~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~---~~~~-~~vvra~~n~~a~~~~~g~l~g------~ 150 (201)
T 2yjz_A 83 REHYDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQ---LVPG-AHVVKAFNTISAWALQSGTLDA------S 150 (201)
Confidence 98777776 5554 45677654 667774 244543 3443 5899999999988732111111 0
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 259 INSSFAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 259 v~aliAv~qd~tgeale~alala~aiG~~ 287 (582)
...+++ .. +.++++.+..+++++|..
T Consensus 151 ~~~~~~-g~--~~~~~~~v~~ll~~~G~~ 176 (201)
T 2yjz_A 151 RQVFVC-GN--DSKAKDRVMDIARTLGLT 176 (201)
Confidence 123233 33 467889999999999974
No 64
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=99.19 E-value=4.4e-11 Score=123.10 Aligned_cols=159 Identities=16% Similarity=0.094 Sum_probs=109.4
Q ss_pred eeccccccccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHH
Q 007987 94 VRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY 173 (582)
Q Consensus 94 ~~~~r~~f~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~ 173 (582)
+++|+|... ....+.| ++|||||+|+||.++|+.|+.. |++|++.++...+ ..+.+.|+.. .+.+
T Consensus 127 ~~~g~w~~~-~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~-----~~l~ 191 (313)
T 2ekl_A 127 AKSGIFKKI-EGLELAG-KTIGIVGFGRIGTKVGIIANAM------GMKVLAYDILDIR--EKAEKINAKA-----VSLE 191 (313)
T ss_dssp HHTTCCCCC-CCCCCTT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCEE-----CCHH
T ss_pred HHcCCCCCC-CCCCCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCcch--hHHHhcCcee-----cCHH
Confidence 455667522 3467899 9999999999999999999988 9998776665433 3467788773 4889
Q ss_pred hhhccCCeEEEeccchhH-HHHH-HHHHhcCCCCcEEEEecCch-------hhhhhcccccCCCCCcEEEeccCCChhhH
Q 007987 174 ETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (582)
Q Consensus 174 Eav~~ADIVILaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~G~~-------i~~~~~~~i~~p~dv~VI~v~Pngpg~~v 244 (582)
+++++||+|++++|.... ..++ ++..+.||+|++|+.++--. ...+.+..+ -...+||+..+|.. .+..
T Consensus 192 ell~~aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i-~ga~lDv~~~eP~~-~~~~ 269 (313)
T 2ekl_A 192 ELLKNSDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKV-YAYATDVFWNEPPK-EEWE 269 (313)
T ss_dssp HHHHHCSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCE-EEEEESCCSSSSCC-SHHH
T ss_pred HHHhhCCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCC-cEEEEecCCCCCCC-Cccc
Confidence 999999999999997653 3455 46778899999888665322 112222111 11246888889854 3333
Q ss_pred HHHHhhcccccCCCceEEEeecc-CCCHHHHHHH
Q 007987 245 RRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVA 277 (582)
Q Consensus 245 R~ly~~G~e~~G~Gv~aliAv~q-d~tgeale~a 277 (582)
..+|.. -+.+++||. ..|.++.+..
T Consensus 270 ~~L~~~--------~nviltPH~~~~t~~~~~~~ 295 (313)
T 2ekl_A 270 LELLKH--------ERVIVTTHIGAQTKEAQKRV 295 (313)
T ss_dssp HHHHHS--------TTEEECCSCTTCSHHHHHHH
T ss_pred chHhhC--------CCEEECCccCcCcHHHHHHH
Confidence 356653 678899997 4455554443
No 65
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.18 E-value=2.9e-10 Score=123.24 Aligned_cols=149 Identities=16% Similarity=0.110 Sum_probs=102.9
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcC-------ceecCCCcCCHHhhhcc---CCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-------FTEENGTLGDIYETISG---SDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G-------~~~~d~t~~~~~Eav~~---ADI 181 (582)
++|+|||+|+||.++|.+|.+. |++|.+.+|+.++..+...+.| +.. ..++++++++ +|+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~------G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~----~~~~~e~v~~l~~aDv 71 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK------GFKVAVFNRTYSKSEEFMKANASAPFAGNLKA----FETMEAFAASLKKPRK 71 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE----CSCHHHHHHHBCSSCE
T ss_pred CEEEEEChHHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE----ECCHHHHHhcccCCCE
Confidence 5799999999999999999998 9988877765444333333446 443 5688888874 999
Q ss_pred EEEeccch-hHHHHHHHHHhcCCCCcEEEEec-Cch--hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCC
Q 007987 182 VLLLISDA-AQADNYEKIFSCMKPNSILGLSH-GFL--LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGA 257 (582)
Q Consensus 182 VILaVPd~-a~~~Vl~eI~~~Lk~GaiL~~a~-G~~--i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~ 257 (582)
||++||+. ...++++++.+++++|++|++.. |.. ...+.+ . ....++.++. +|...+.. .-. .
T Consensus 72 VilaVp~~~~v~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~-~-l~~~g~~~v~-~pv~gg~~---~a~-------~ 138 (478)
T 1pgj_A 72 ALILVQAGAATDSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQ-Q-LEAAGLRFLG-MGISGGEE---GAR-------K 138 (478)
T ss_dssp EEECCCCSHHHHHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHH-H-HHTTTCEEEE-EEEESHHH---HHH-------H
T ss_pred EEEecCChHHHHHHHHHHHhhCCCCCEEEECCCCChHHHHHHHH-H-HHHCCCeEEE-eeccCCHH---HHh-------c
Confidence 99999995 67889999999999999877654 542 222222 1 1123566663 57554443 112 2
Q ss_pred CceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 258 GINSSFAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 258 Gv~aliAv~qd~tgeale~alala~aiG~~ 287 (582)
|. .++ +.. +.++.+.+..++..+|..
T Consensus 139 g~-~i~-~gg--~~~~~~~v~~ll~~~g~~ 164 (478)
T 1pgj_A 139 GP-AFF-PGG--TLSVWEEIRPIVEAAAAK 164 (478)
T ss_dssp CC-EEE-EEE--CHHHHHHHHHHHHHHSCB
T ss_pred CC-eEe-ccC--CHHHHHHHHHHHHHhccc
Confidence 34 323 333 578899999999999974
No 66
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.18 E-value=1.7e-10 Score=125.79 Aligned_cols=152 Identities=17% Similarity=0.071 Sum_probs=103.9
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecC-CCcCCHHhhhc---cCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-GTLGDIYETIS---GSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d-~t~~~~~Eav~---~ADIVILaVP 187 (582)
++|||||+|.||.++|++|.+. |++|++++++.++ .+...+.|..... ....+++|+++ ++|+||++||
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~------G~~V~v~dr~~~~-~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp 77 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDH------GFVVCAFNRTVSK-VDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVK 77 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT------TCCEEEECSSTHH-HHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred CEEEEEChhHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecC
Confidence 7899999999999999999999 9998887776544 4444444321000 00367888887 4999999999
Q ss_pred ch-hHHHHHHHHHhcCCCCcEEEEecCchhh---hhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCceEEE
Q 007987 188 DA-AQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSF 263 (582)
Q Consensus 188 d~-a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~---~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~ali 263 (582)
+. ...++++++.++|++|++|++.+..... .+.+ . ....++.++.. |-.-+.. .-+. |. + +
T Consensus 78 ~~~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~-~-l~~~Gi~fvd~-pVsGg~~---gA~~-------G~-~-i 142 (484)
T 4gwg_A 78 AGQAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCR-D-LKAKGILFVGS-GVSGGEE---GARY-------GP-S-L 142 (484)
T ss_dssp SSHHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHH-H-HHHTTCEEEEE-EEESHHH---HHHH-------CC-E-E
T ss_pred ChHHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHH-H-HHhhccccccC-CccCCHH---HHhc-------CC-e-e
Confidence 95 6678999999999999999887654321 1111 0 12346777763 6322222 1222 34 4 3
Q ss_pred eeccCCCHHHHHHHHHHHHHhCCC
Q 007987 264 AVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 264 Av~qd~tgeale~alala~aiG~~ 287 (582)
.+.. +.++.+.++.+++.+|..
T Consensus 143 m~GG--~~ea~~~v~pll~~ig~~ 164 (484)
T 4gwg_A 143 MPGG--NKEAWPHIKTIFQGIAAK 164 (484)
T ss_dssp EEEE--CGGGHHHHHHHHHHHSCB
T ss_pred ecCC--CHHHHHHHHHHHHHhcCc
Confidence 3454 468999999999999974
No 67
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=99.17 E-value=8e-11 Score=120.87 Aligned_cols=158 Identities=18% Similarity=0.100 Sum_probs=108.4
Q ss_pred eecccccc-ccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCH
Q 007987 94 VRGGRDLF-NLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (582)
Q Consensus 94 ~~~~r~~f-~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~ 172 (582)
++.|+|.. ......+.| ++|||||+|+||.++|+.|+.. |++|++.++...+ +.+.+.|+. ..+.
T Consensus 125 ~~~g~w~~~~~~~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~-----~~~l 190 (307)
T 1wwk_A 125 MREGVWAKKEAMGIELEG-KTIGIIGFGRIGYQVAKIANAL------GMNILLYDPYPNE--ERAKEVNGK-----FVDL 190 (307)
T ss_dssp HTTTCCCTTTCCBCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHTTCE-----ECCH
T ss_pred HHcCCCCccCcCCcccCC-ceEEEEccCHHHHHHHHHHHHC------CCEEEEECCCCCh--hhHhhcCcc-----ccCH
Confidence 34456642 112467899 9999999999999999999988 9998776665433 456778886 3588
Q ss_pred HhhhccCCeEEEeccchhH-HHHH-HHHHhcCCCCcEEEEecCch-------hhhhhcccccCCCCCcEEEeccCCChhh
Q 007987 173 YETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 173 ~Eav~~ADIVILaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~G~~-------i~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
++++++||+|++++|.... ..++ ++..+.||+|++|+.++--. ...+++..+ ....++|+..+|..+.+.
T Consensus 191 ~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i-~ga~lDv~~~eP~~~~~~ 269 (307)
T 1wwk_A 191 ETLLKESDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWI-AGAGLDVFEEEPLPKDHP 269 (307)
T ss_dssp HHHHHHCSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSS-SEEEESCCSSSSCCTTCG
T ss_pred HHHHhhCCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCC-cEEEEecCCCCCCCCCCh
Confidence 9999999999999997653 4455 46778899999988664322 223333222 123567888888533333
Q ss_pred HHHHHhhcccccCCCceEEEeecc-CCCHHHHHHH
Q 007987 244 VRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVA 277 (582)
Q Consensus 244 vR~ly~~G~e~~G~Gv~aliAv~q-d~tgeale~a 277 (582)
+|. .-+.+++||. ..|.++.+..
T Consensus 270 ---L~~--------~~nviltPh~~~~t~~~~~~~ 293 (307)
T 1wwk_A 270 ---LTK--------FDNVVLTPHIGASTVEAQERA 293 (307)
T ss_dssp ---GGG--------CTTEEECSSCTTCBHHHHHHH
T ss_pred ---HHh--------CCCEEECCccccCcHHHHHHH
Confidence 444 3678899987 4455554443
No 68
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.17 E-value=8.6e-10 Score=118.98 Aligned_cols=191 Identities=13% Similarity=0.079 Sum_probs=122.8
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-----------cCceec-------CCCcCCH
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------NGTLGDI 172 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-----------~G~~~~-------d~t~~~~ 172 (582)
+++|+|||+|.||.++|..|..+ |++|++.+++. ...+.+.+ .|.... .....+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~------G~~V~l~D~~~-~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 109 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV------GISVVAVESDP-KQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST 109 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSH-HHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG
T ss_pred CCEEEEECcCHHHHHHHHHHHhC------CCeEEEEECCH-HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH
Confidence 48999999999999999999998 99987766543 33333322 121000 0012355
Q ss_pred HhhhccCCeEEEeccchhH--HHHHHHHHhcCCCCcEEEE-ecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHHh
Q 007987 173 YETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILGL-SHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYV 249 (582)
Q Consensus 173 ~Eav~~ADIVILaVPd~a~--~~Vl~eI~~~Lk~GaiL~~-a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~ 249 (582)
+++++||+||+++|.... .+++.+|.++++++++|+. +++..+..+.+ ......+++..||-.|.+.
T Consensus 110 -~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~la~---~~~~~~~~ig~hf~~P~~~------ 179 (463)
T 1zcj_A 110 -KELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHV------ 179 (463)
T ss_dssp -GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEEECSSTTT------
T ss_pred -HHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHHHH---HhcCCcceEEeecCCCccc------
Confidence 578899999999998653 5688899999999998764 45666655544 2333457999999777554
Q ss_pred hcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhchHHHHHHHHHHHHHHcCCC
Q 007987 250 QGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGAVHGIVESLFRRFTENGMN 329 (582)
Q Consensus 250 ~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~~pAlieAl~d~lVe~Gl~ 329 (582)
+-..-+..+...+++..+.+..+++.+|...+ ...+ ..-|- .--.+.+++..++ .+++.|++
T Consensus 180 --------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v----~v~~--~~gfi---~Nrll~~~~~ea~-~l~~~G~~ 241 (463)
T 1zcj_A 180 --------MRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV----VVGN--CYGFV---GNRMLAPYYNQGF-FLLEEGSK 241 (463)
T ss_dssp --------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE----EBCC--STTTT---HHHHHHHHHHHHH-HHHHTTCC
T ss_pred --------ceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEE----EECC--CccHH---HHHHHHHHHHHHH-HHHHcCCC
Confidence 12333566667889999999999999997411 1111 11221 1112222333333 45666999
Q ss_pred HHHHHHH
Q 007987 330 EDLAYKN 336 (582)
Q Consensus 330 pe~Ay~~ 336 (582)
+++....
T Consensus 242 ~~~id~~ 248 (463)
T 1zcj_A 242 PEDVDGV 248 (463)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9875553
No 69
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.17 E-value=3.7e-11 Score=120.36 Aligned_cols=165 Identities=16% Similarity=0.122 Sum_probs=102.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCC-ceEEEEecCCcccHHHHHH-cCceecC--CC-------cCCHHhhhccCC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARA-AGFTEEN--GT-------LGDIYETISGSD 180 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G-~~ViVg~r~~sks~~~A~~-~G~~~~d--~t-------~~~~~Eav~~AD 180 (582)
++|+|||+|+||.++|.+|.++.. ...| ++|++.+| +...+...+ .|+...+ +. +.+..+.++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~-~~~g~~~V~~~~r--~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAA-ATDGLLEVSWIAR--GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVD 85 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHH-HTTSSEEEEEECC--HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCcc-ccCCCCCEEEEEc--HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCC
Confidence 589999999999999999986400 0004 67777666 344555555 6876411 00 013345678999
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEE-EecCchh-hhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCC
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFLL-GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~-~a~G~~i-~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~G 258 (582)
+||++||+....++++++.++++++++|+ ...|+.. ..+.+ .+|+. .+++.+|+.++......... ..+.|
T Consensus 86 ~vil~vk~~~~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~---~l~~~-~v~~g~~~~~a~~~~pg~~~---~~~~g 158 (317)
T 2qyt_A 86 YILFCTKDYDMERGVAEIRPMIGQNTKILPLLNGADIAERMRT---YLPDT-VVWKGCVYISARKSAPGLIT---LEADR 158 (317)
T ss_dssp EEEECCSSSCHHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTT---TSCTT-TBCEEEEEEEEEEEETTEEE---EEEEE
T ss_pred EEEEecCcccHHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHH---HCCCC-cEEEEEEEEEEEEcCCCEEE---EcCCC
Confidence 99999999999999999999998888665 5678765 34443 34443 56667775544431000000 01234
Q ss_pred ceEEEeec-cCCCHHHHHHHHHHHHHhCCC
Q 007987 259 INSSFAVH-QDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 259 v~aliAv~-qd~tgeale~alala~aiG~~ 287 (582)
...+++.. ...+.+.. .+..++...|..
T Consensus 159 ~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~ 187 (317)
T 2qyt_A 159 ELFYFGSGLPEQTDDEV-RLAELLTAAGIR 187 (317)
T ss_dssp EEEEEECCSSSCCHHHH-HHHHHHHHTTCC
T ss_pred ceEEEcCCCCCCcCHHH-HHHHHHHHCCCC
Confidence 33324433 33345556 778999999864
No 70
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.15 E-value=1.6e-10 Score=113.98 Aligned_cols=149 Identities=16% Similarity=0.082 Sum_probs=96.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc---Cc--eecCCCcCCHHhhhccCCeEEEec
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---GF--TEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~---G~--~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
+||+|||+|+||.++|.+|.++ |++|.+.+|+..+..+ .... |. .. .-...+ .++++++|+||+++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~------g~~V~~~~r~~~~~~~-l~~~~~~~~~~~~-~~~~~~-~~~~~~~d~vi~~v 71 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ------GHEVQGWLRVPQPYCS-VNLVETDGSIFNE-SLTAND-PDFLATSDLLLVTL 71 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSEEE-EEEECTTSCEEEE-EEEESC-HHHHHTCSEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCccceee-EEEEcCCCceeee-eeeecC-ccccCCCCEEEEEe
Confidence 4899999999999999999998 9998877775433211 1111 11 00 001223 46778999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEE-EecCchhh-hhhcccccCCC---CC---cEEEeccCCChhhHHHHHhhcccccCCC
Q 007987 187 SDAAQADNYEKIFSCMKPNSILG-LSHGFLLG-HLQSMGLDFPK---NI---GVIAVCPKGMGPSVRRLYVQGKEINGAG 258 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~-~a~G~~i~-~~~~~~i~~p~---dv---~VI~v~Pngpg~~vR~ly~~G~e~~G~G 258 (582)
|+....++++++.++++++++|+ ...|+... .+.+ .+++ ++ ...+.+| .+.+. +.|
T Consensus 72 ~~~~~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~---~~~~~~~g~~~~~~~~~~p-~~~~~------------~~g 135 (291)
T 1ks9_A 72 KAWQVSDAVKSLASTLPVTTPILLIHNGMGTIEELQN---IQQPLLMGTTTHAARRDGN-VIIHV------------ANG 135 (291)
T ss_dssp CGGGHHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTT---CCSCEEEEEECCEEEEETT-EEEEE------------ECC
T ss_pred cHHhHHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHH---hcCCeEEEEEeEccEEcCC-EEEEe------------ccc
Confidence 99999999999999999988655 56777542 3433 2333 11 1234444 32222 456
Q ss_pred ceEEEeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 259 INSSFAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 259 v~aliAv~qd~tgeale~alala~aiG~~ 287 (582)
... +.+.. .+.+..+.+..++..+|..
T Consensus 136 ~~~-i~~~~-~~~~~~~~~~~ll~~~g~~ 162 (291)
T 1ks9_A 136 ITH-IGPAR-QQDGDYSYLADILQTVLPD 162 (291)
T ss_dssp CEE-EEESS-GGGTTCTHHHHHHHTTSSC
T ss_pred ceE-EccCC-CCcchHHHHHHHHHhcCCC
Confidence 644 54432 2345677888999999964
No 71
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=99.14 E-value=7.2e-11 Score=121.85 Aligned_cols=148 Identities=16% Similarity=0.148 Sum_probs=101.9
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEec-CCcccHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r-~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
...+.| ++|||||+|+||+++|+.|+.. |++|++.++ ...+ ..+.+.|+.. ..+.++++++||+|+
T Consensus 141 ~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~--~~~~~~g~~~----~~~l~ell~~aDvVi 207 (320)
T 1gdh_A 141 GEKLDN-KTLGIYGFGSIGQALAKRAQGF------DMDIDYFDTHRASS--SDEASYQATF----HDSLDSLLSVSQFFS 207 (320)
T ss_dssp BCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCCH--HHHHHHTCEE----CSSHHHHHHHCSEEE
T ss_pred CcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCcCh--hhhhhcCcEE----cCCHHHHHhhCCEEE
Confidence 457899 9999999999999999999987 999877666 4333 3566678763 347899999999999
Q ss_pred Eeccchh-HHHHHH-HHHhcCCCCcEEEEec-Cc--h----hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcccc
Q 007987 184 LLISDAA-QADNYE-KIFSCMKPNSILGLSH-GF--L----LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEI 254 (582)
Q Consensus 184 LaVPd~a-~~~Vl~-eI~~~Lk~GaiL~~a~-G~--~----i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~ 254 (582)
+++|... ...++. +..+.||+|++|+.++ |- . ...+.+..+ ....++|+..+| .+.+ .+|.
T Consensus 208 l~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i-~gA~lDv~~~eP-~~~~---~L~~----- 277 (320)
T 1gdh_A 208 LNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRL-AYAGFDVFAGEP-NINE---GYYD----- 277 (320)
T ss_dssp ECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSE-EEEEESCCTTTT-SCCT---TGGG-----
T ss_pred EeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCC-cEEEEeCCCCCC-CCCC---hhhh-----
Confidence 9999764 345663 5788999999888554 42 1 222322222 123466776777 2222 3454
Q ss_pred cCCCceEEEeecc-CCCHHHHHHHH
Q 007987 255 NGAGINSSFAVHQ-DVDGRATNVAL 278 (582)
Q Consensus 255 ~G~Gv~aliAv~q-d~tgeale~al 278 (582)
.-+.+++||. ..|.++.+...
T Consensus 278 ---~~nviltPH~~~~t~~~~~~~~ 299 (320)
T 1gdh_A 278 ---LPNTFLFPHIGSAATQAREDMA 299 (320)
T ss_dssp ---CTTEEECSSCTTCBHHHHHHHH
T ss_pred ---CCCEEECCcCCcCcHHHHHHHH
Confidence 3688899997 44555544443
No 72
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=99.13 E-value=1.5e-10 Score=120.57 Aligned_cols=156 Identities=15% Similarity=0.066 Sum_probs=107.9
Q ss_pred eeccccccc-cccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCH
Q 007987 94 VRGGRDLFN-LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (582)
Q Consensus 94 ~~~~r~~f~-~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~ 172 (582)
+++|+|... .....+.| ++|||||+|.||.++|+.|+.. |++|++.++..++ +.+.+.|+. ..++
T Consensus 148 ~~~g~W~~~~~~~~~l~g-~tvgIIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~-----~~~l 213 (335)
T 2g76_A 148 MKDGKWERKKFMGTELNG-KTLGILGLGRIGREVATRMQSF------GMKTIGYDPIISP--EVSASFGVQ-----QLPL 213 (335)
T ss_dssp HHTTCCCTGGGCBCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSSCH--HHHHHTTCE-----ECCH
T ss_pred HHcCCCCccCCCCcCCCc-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcch--hhhhhcCce-----eCCH
Confidence 345667432 12467899 9999999999999999999987 9998766654333 456778876 3588
Q ss_pred HhhhccCCeEEEeccchhH-HHHH-HHHHhcCCCCcEEEEecCch-------hhhhhcccccCCCCCcEEEeccCCChhh
Q 007987 173 YETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 173 ~Eav~~ADIVILaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~G~~-------i~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
++++++||+|++++|.... ..++ +++++.||+|++|+.++--. ...+++..+ -...+||+..+|. +.+
T Consensus 214 ~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i-~gA~lDV~~~EP~-~~~- 290 (335)
T 2g76_A 214 EEIWPLCDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQC-AGAALDVFTEEPP-RDR- 290 (335)
T ss_dssp HHHGGGCSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSE-EEEEESCCSSSSC-SCC-
T ss_pred HHHHhcCCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCc-cEEEEeecCCCCC-CCc-
Confidence 9999999999999998754 4566 46888999999988665322 222333222 1124678888883 332
Q ss_pred HHHHHhhcccccCCCceEEEeecc-CCCHHHHHH
Q 007987 244 VRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (582)
Q Consensus 244 vR~ly~~G~e~~G~Gv~aliAv~q-d~tgeale~ 276 (582)
.+|.. -+.+++||. ..|.++.+.
T Consensus 291 --~L~~~--------~nvilTPH~~~~t~e~~~~ 314 (335)
T 2g76_A 291 --ALVDH--------ENVISCPHLGASTKEAQSR 314 (335)
T ss_dssp --HHHHS--------TTEEECSSCTTCBHHHHHH
T ss_pred --hHHhC--------CCEEECCcCCCCCHHHHHH
Confidence 35553 678899986 445555443
No 73
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.12 E-value=8.6e-11 Score=113.41 Aligned_cols=137 Identities=18% Similarity=0.174 Sum_probs=92.0
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
.+.+ ++|+|||+|+||.++|..|.+. |++|++.+++.. +++++|+||+++
T Consensus 16 ~~~~-~~I~iiG~G~mG~~la~~l~~~------g~~V~~~~~~~~-----------------------~~~~aD~vi~av 65 (209)
T 2raf_A 16 YFQG-MEITIFGKGNMGQAIGHNFEIA------GHEVTYYGSKDQ-----------------------ATTLGEIVIMAV 65 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCC-----------------------CSSCCSEEEECS
T ss_pred ccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCHH-----------------------HhccCCEEEEcC
Confidence 3556 8999999999999999999998 988877655422 356899999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEE-EecCch---------------hhhhhcccccCCCCCcEEE-eccCCChhhHHHHHh
Q 007987 187 SDAAQADNYEKIFSCMKPNSILG-LSHGFL---------------LGHLQSMGLDFPKNIGVIA-VCPKGMGPSVRRLYV 249 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~-~a~G~~---------------i~~~~~~~i~~p~dv~VI~-v~Pngpg~~vR~ly~ 249 (582)
|+....++++++.+.++ +++|+ .+.|+. ...+++ .+| +.+|++ ++|. .++.....-.
T Consensus 66 ~~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~---~l~-~~~vv~~~~~~-~~p~~~~~~~ 139 (209)
T 2raf_A 66 PYPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQ---QLP-DSQVLKAFNTT-FAATLQSGQV 139 (209)
T ss_dssp CHHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHH---HCT-TSEEEECSTTS-CHHHHHHSEE
T ss_pred CcHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHH---HCC-CCcEEEeeecc-cHhhcccccc
Confidence 99988999999988888 88766 456664 233433 344 568888 5542 2222111100
Q ss_pred hcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCC
Q 007987 250 QGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGS 286 (582)
Q Consensus 250 ~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~ 286 (582)
. |.+... +.+.. .+.++.+.+.+++..+|.
T Consensus 140 ~-----g~~~~~-~~~~g-~~~~~~~~v~~ll~~~G~ 169 (209)
T 2raf_A 140 N-----GKEPTT-VLVAG-NDDSAKQRFTRALADSPL 169 (209)
T ss_dssp T-----TTEECE-EEEEE-SCHHHHHHHHHHTTTSSC
T ss_pred C-----CCCCce-eEEcC-CCHHHHHHHHHHHHHcCC
Confidence 1 112323 22222 256889999999999996
No 74
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.09 E-value=2.5e-09 Score=121.62 Aligned_cols=191 Identities=12% Similarity=0.061 Sum_probs=122.4
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-----------cCceec-------C--CCcC
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-------N--GTLG 170 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-----------~G~~~~-------d--~t~~ 170 (582)
|++|+|||+|.||.++|.+|.++ |++|++.+++.+ ..+.+.+ .|.... + ....
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~a------G~~V~l~D~~~~-~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~ 384 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILS------NYPVILKEVNEK-FLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSL 384 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSHH-HHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEES
T ss_pred CcEEEEEcCCHhhHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeC
Confidence 58899999999999999999998 999887766533 2333221 232100 0 0023
Q ss_pred CHHhhhccCCeEEEeccchhH--HHHHHHHHhcCCCCcEEE-EecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHH
Q 007987 171 DIYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSILG-LSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRL 247 (582)
Q Consensus 171 ~~~Eav~~ADIVILaVPd~a~--~~Vl~eI~~~Lk~GaiL~-~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~l 247 (582)
++ +++++||+||+++|++.. ..++.++.++++++++|+ .++++.+..+.+ .....-+|+..|+--|.+.
T Consensus 385 d~-~~~~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~---~~~~p~~~iG~hf~~P~~~---- 456 (725)
T 2wtb_A 385 DY-ESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGE---RTKSQDRIVGAHFFSPAHI---- 456 (725)
T ss_dssp SS-GGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTT---TCSCTTTEEEEEECSSTTT----
T ss_pred CH-HHHCCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHH---HhcCCCCEEEecCCCCccc----
Confidence 45 578999999999998764 468889999999999874 567777765544 2222346899998666544
Q ss_pred HhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh-hhhchHHHHHHHHHHHHHHc
Q 007987 248 YVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER-ILLGAVHGIVESLFRRFTEN 326 (582)
Q Consensus 248 y~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq-vLsG~~pAlieAl~d~lVe~ 326 (582)
+-...+..+...+++..+.+..+++.+|...+. ..+. .-|-.- ++. +.+.|+ . .+++.
T Consensus 457 ----------~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~----v~d~--~Gfi~Nril~---~~~~Ea-~-~l~~~ 515 (725)
T 2wtb_A 457 ----------MPLLEIVRTNHTSAQVIVDLLDVGKKIKKTPVV----VGNC--TGFAVNRMFF---PYTQAA-M-FLVEC 515 (725)
T ss_dssp ----------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEE----EESS--TTTTHHHHHH---HHHHHH-H-HHHHT
T ss_pred ----------CceEEEEECCCCCHHHHHHHHHHHHHhCCEEEE----ECCC--ccHHHHHHHH---HHHHHH-H-HHHHC
Confidence 122334556677899999999999999974111 1111 112111 222 223444 3 35556
Q ss_pred CCCHHHHHHHH
Q 007987 327 GMNEDLAYKNT 337 (582)
Q Consensus 327 Gl~pe~Ay~~~ 337 (582)
|+++++.....
T Consensus 516 G~~~e~id~~~ 526 (725)
T 2wtb_A 516 GADPYLIDRAI 526 (725)
T ss_dssp TCCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 99998766644
No 75
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=99.07 E-value=1.4e-09 Score=110.69 Aligned_cols=163 Identities=20% Similarity=0.167 Sum_probs=109.5
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecC--CC--------cCCHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN--GT--------LGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d--~t--------~~~~~Eav~~ADI 181 (582)
+||+|||+|+||.++|..|.++ |.+|.+..|+. .+..++.|+.... +. ..+. +.++.+|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~D~ 72 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS------GEDVHFLLRRD---YEAIAGNGLKVFSINGDFTLPHVKGYRAP-EEIGPMDL 72 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT------SCCEEEECSTT---HHHHHHTCEEEEETTCCEEESCCCEESCH-HHHCCCSE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCeEEEEEcCc---HHHHHhCCCEEEcCCCeEEEeeceeecCH-HHcCCCCE
Confidence 6899999999999999999998 88887777653 3556677765311 10 1234 34678999
Q ss_pred EEEeccchhHHHHHHHHHhcCCCCcEE-EEecCch-hhhhhcccccCCCCCcEEEec------cCCChhhHHHHHhhccc
Q 007987 182 VLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFL-LGHLQSMGLDFPKNIGVIAVC------PKGMGPSVRRLYVQGKE 253 (582)
Q Consensus 182 VILaVPd~a~~~Vl~eI~~~Lk~GaiL-~~a~G~~-i~~~~~~~i~~p~dv~VI~v~------Pngpg~~vR~ly~~G~e 253 (582)
||++||+....+++++|.++++++++| ++..|+. ...+.+ .+|+. +|+..+ -.+|+.+. .
T Consensus 73 vilavk~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~---~~~~~-~v~~~~~~~~a~~~~p~~v~-----~--- 140 (312)
T 3hn2_A 73 VLVGLKTFANSRYEELIRPLVEEGTQILTLQNGLGNEEALAT---LFGAE-RIIGGVAFLCSNRGEPGEVH-----H--- 140 (312)
T ss_dssp EEECCCGGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHH---HTCGG-GEEEEEEEEECCBCSSSEEE-----E---
T ss_pred EEEecCCCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHH---HCCCC-cEEEEEEEeeeEEcCCcEEE-----E---
Confidence 999999999999999999999998865 5778985 445544 34432 555443 34566652 1
Q ss_pred ccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh
Q 007987 254 INGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER 306 (582)
Q Consensus 254 ~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq 306 (582)
.|.|... ++.....+.+..+.+.+++...|.. -+...|+.+.+
T Consensus 141 -~~~g~~~-ig~~~~~~~~~~~~l~~~l~~~g~~--------~~~~~di~~~~ 183 (312)
T 3hn2_A 141 -LGAGRII-LGEFLPRDTGRIEELAAMFRQAGVD--------CRTTDDLKRAR 183 (312)
T ss_dssp -CEEEEEE-EEESSCCCSHHHHHHHHHHHHTTCC--------EEECSCHHHHH
T ss_pred -CCCCeEE-EecCCCCccHHHHHHHHHHHhCCCC--------cEEChHHHHHH
Confidence 1334433 4544333445666677888887754 23456666655
No 76
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.07 E-value=3.2e-10 Score=109.76 Aligned_cols=149 Identities=18% Similarity=0.187 Sum_probs=99.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchhH
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a~ 191 (582)
++|+|||+|.||.+++.+|.+. |++|++.+|+. ...+...+.|+.. .+..++++++|+||+++|++..
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~------g~~V~~~~r~~-~~~~~~~~~g~~~-----~~~~~~~~~~DvVi~av~~~~~ 96 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGS------GFKVVVGSRNP-KRTARLFPSAAQV-----TFQEEAVSSPEVIFVAVFREHY 96 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSH-HHHHHHSBTTSEE-----EEHHHHTTSCSEEEECSCGGGS
T ss_pred CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCce-----ecHHHHHhCCCEEEECCChHHH
Confidence 7899999999999999999998 88887766643 2233343446663 3788889999999999999876
Q ss_pred HHHHHHHHhcCCCCcEEE-EecCchhhhh----------hcccccCCCCCcEEEeccCCChhhHHHHHhhcccccCCCce
Q 007987 192 ADNYEKIFSCMKPNSILG-LSHGFLLGHL----------QSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGIN 260 (582)
Q Consensus 192 ~~Vl~eI~~~Lk~GaiL~-~a~G~~i~~~----------~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~G~Gv~ 260 (582)
.++++ +.+.+ ++++|+ .+.|..+..+ .+ .+| +.+|++.+ |...... +..+-. .|-+
T Consensus 97 ~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~---~l~-~~~vv~~~-n~~~~~~---~~~~~~---~g~~ 163 (215)
T 2vns_A 97 SSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLAS---LFP-TCTVVKAF-NVISAWT---LQAGPR---DGNR 163 (215)
T ss_dssp GGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHH---HCT-TSEEEEEC-TTBCHHH---HHTCSC---SSCC
T ss_pred HHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHH---HCC-CCeEEecc-ccccHhH---hccccc---CCce
Confidence 67775 66666 777765 5667754322 12 344 46788887 4432221 111110 1222
Q ss_pred EEEeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 261 SSFAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 261 aliAv~qd~tgeale~alala~aiG~~ 287 (582)
.++.... +.++.+.+..++..+|..
T Consensus 164 ~~~~~g~--~~~~~~~v~~ll~~~G~~ 188 (215)
T 2vns_A 164 QVPICGD--QPEAKRAVSEMALAMGFM 188 (215)
T ss_dssp EEEEEES--CHHHHHHHHHHHHHTTCE
T ss_pred eEEEecC--CHHHHHHHHHHHHHcCCc
Confidence 2233232 678999999999999974
No 77
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.05 E-value=3.4e-09 Score=113.05 Aligned_cols=195 Identities=12% Similarity=0.111 Sum_probs=118.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-------------------cC-ceecCCCcCC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-------------------~G-~~~~d~t~~~ 171 (582)
+||+|||+|.||.++|..|.+. |++|++.+++ .+..+...+ .| +.. ..+
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~------G~~V~~~d~~-~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~----t~~ 69 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR------GHEVIGVDVS-STKIDLINQGKSPIVEPGLEALLQQGRQTGRLSG----TTD 69 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----ESC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCEEEEEECC-HHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEE----eCC
Confidence 4899999999999999999998 9988665554 333333332 23 332 457
Q ss_pred HHhhhccCCeEEEeccchh----------HHHHHHHHHhcCCC---CcEEEEecCchhhh--------hhcc-cccCCCC
Q 007987 172 IYETISGSDLVLLLISDAA----------QADNYEKIFSCMKP---NSILGLSHGFLLGH--------LQSM-GLDFPKN 229 (582)
Q Consensus 172 ~~Eav~~ADIVILaVPd~a----------~~~Vl~eI~~~Lk~---GaiL~~a~G~~i~~--------~~~~-~i~~p~d 229 (582)
++++++++|+||+++|... ..+++++|.+++++ +++|++.+++.... +++. +.....+
T Consensus 70 ~~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~ 149 (436)
T 1mv8_A 70 FKKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVD 149 (436)
T ss_dssp HHHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTT
T ss_pred HHHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCc
Confidence 7888999999999998655 77888999999999 89887665443211 1110 1111112
Q ss_pred CcEEEeccC--CChhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhh
Q 007987 230 IGVIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERI 307 (582)
Q Consensus 230 v~VI~v~Pn--gpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqv 307 (582)
.. +...|. .||..+.+.+. .+.++ +..+ ++++.+.+..++..+|.. ++.+... ..+.-. .
T Consensus 150 ~~-v~~~Pe~~~~G~~~~~~~~---------~~~iv-~G~~-~~~~~~~~~~l~~~~~~~-v~~~~~~-~ae~~K----l 211 (436)
T 1mv8_A 150 FG-VGTNPEFLRESTAIKDYDF---------PPMTV-IGEL-DKQTGDLLEEIYRELDAP-IIRKTVE-VAEMIK----Y 211 (436)
T ss_dssp BE-EEECCCCCCTTSHHHHHHS---------CSCEE-EEES-SHHHHHHHHHHHTTSSSC-EEEEEHH-HHHHHH----H
T ss_pred EE-EEECcccccccccchhccC---------CCEEE-EEcC-CHHHHHHHHHHHhccCCC-EEcCCHH-HHHHHH----H
Confidence 33 344553 34444433332 12212 2222 578889999999999863 2112211 001101 2
Q ss_pred hhchH----HHHHHHHHHHHHHcCCCHHHHHH
Q 007987 308 LLGAV----HGIVESLFRRFTENGMNEDLAYK 335 (582)
Q Consensus 308 LsG~~----pAlieAl~d~lVe~Gl~pe~Ay~ 335 (582)
+.++. .+++..+...+.+.|+++++...
T Consensus 212 ~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~ 243 (436)
T 1mv8_A 212 TCNVWHAAKVTFANEIGNIAKAVGVDGREVMD 243 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 33333 34677777788889999875443
No 78
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=99.05 E-value=5.3e-10 Score=117.25 Aligned_cols=145 Identities=21% Similarity=0.178 Sum_probs=100.6
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
...+.| +||||||+|.||+++|+.|+.. |++|+++++. ...+.+.+.|+.. +.++++++++||+|++
T Consensus 155 ~~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~--~~~~~~~~~g~~~----~~~l~ell~~aDiV~l 221 (352)
T 3gg9_A 155 GRVLKG-QTLGIFGYGKIGQLVAGYGRAF------GMNVLVWGRE--NSKERARADGFAV----AESKDALFEQSDVLSV 221 (352)
T ss_dssp BCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSH--HHHHHHHHTTCEE----CSSHHHHHHHCSEEEE
T ss_pred CccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEECCC--CCHHHHHhcCceE----eCCHHHHHhhCCEEEE
Confidence 467899 9999999999999999999988 9998766554 2345667788874 5589999999999999
Q ss_pred eccchhH-HHHHH-HHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhccccc
Q 007987 185 LISDAAQ-ADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEIN 255 (582)
Q Consensus 185 aVPd~a~-~~Vl~-eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~ 255 (582)
++|.... ..++. +.++.||+|++|+.++ |-. +..++++.+ -...+||.--.|-.+.+. ++.
T Consensus 222 ~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i-~gA~lDV~~~EPl~~~~p---L~~------ 291 (352)
T 3gg9_A 222 HLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRP-GMAAIDVFETEPILQGHT---LLR------ 291 (352)
T ss_dssp CCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSS-SEEEECCCSSSCCCSCCG---GGG------
T ss_pred eccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCc-cEEEecccCCCCCCCCCh---hhc------
Confidence 9996654 34554 6889999999998775 321 223333222 123556666666333333 222
Q ss_pred CCCceEEEeecc-CCCHHHH
Q 007987 256 GAGINSSFAVHQ-DVDGRAT 274 (582)
Q Consensus 256 G~Gv~aliAv~q-d~tgeal 274 (582)
--+.+++||- ..|.++.
T Consensus 292 --~~nvilTPHia~~t~e~~ 309 (352)
T 3gg9_A 292 --MENCICTPHIGYVERESY 309 (352)
T ss_dssp --CTTEEECCSCTTCBHHHH
T ss_pred --CCCEEECCCCCCCCHHHH
Confidence 2467889986 3444443
No 79
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=99.02 E-value=9e-10 Score=116.16 Aligned_cols=145 Identities=14% Similarity=0.152 Sum_probs=102.8
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
...+.| +||||||+|.||+++|+.|+.. |++|++.++. ...+.+.+.|+. ..++++++++||+|++
T Consensus 171 ~~~l~g-ktvGIIGlG~IG~~vA~~l~~f------G~~V~~~d~~--~~~~~~~~~g~~-----~~~l~ell~~aDvV~l 236 (365)
T 4hy3_A 171 ARLIAG-SEIGIVGFGDLGKALRRVLSGF------RARIRVFDPW--LPRSMLEENGVE-----PASLEDVLTKSDFIFV 236 (365)
T ss_dssp CCCSSS-SEEEEECCSHHHHHHHHHHTTS------CCEEEEECSS--SCHHHHHHTTCE-----ECCHHHHHHSCSEEEE
T ss_pred ccccCC-CEEEEecCCcccHHHHHhhhhC------CCEEEEECCC--CCHHHHhhcCee-----eCCHHHHHhcCCEEEE
Confidence 467899 9999999999999999999877 9998776654 234566678887 4689999999999999
Q ss_pred eccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhccccc
Q 007987 185 LISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEIN 255 (582)
Q Consensus 185 aVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~ 255 (582)
++|.... ..++ .+.+..||+|++|+.++ |-. +..++++.+. ..+||.--.|--+.+. ++.
T Consensus 237 ~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~--aaLDV~~~EPl~~~~p---L~~------ 305 (365)
T 4hy3_A 237 VAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV--AASDVYPEEPLPLDHP---VRS------ 305 (365)
T ss_dssp CSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE--EEESCCSSSSCCTTCG---GGT------
T ss_pred cCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce--EEeeCCCCCCCCCCCh---hhc------
Confidence 9997654 4455 46888999999998665 321 3344444443 4567776666433333 222
Q ss_pred CCCceEEEeecc-CCCHHHHHH
Q 007987 256 GAGINSSFAVHQ-DVDGRATNV 276 (582)
Q Consensus 256 G~Gv~aliAv~q-d~tgeale~ 276 (582)
--+.+++||- ..|.++.+.
T Consensus 306 --~~nvilTPHia~~t~e~~~~ 325 (365)
T 4hy3_A 306 --LKGFIRSAHRAGALDSAFKK 325 (365)
T ss_dssp --CTTEEECCSCSSCCHHHHHH
T ss_pred --CCCEEECCccccCHHHHHHH
Confidence 1467889986 456655543
No 80
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=99.01 E-value=2.9e-10 Score=116.34 Aligned_cols=151 Identities=15% Similarity=0.117 Sum_probs=101.3
Q ss_pred eeccccccccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHH
Q 007987 94 VRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY 173 (582)
Q Consensus 94 ~~~~r~~f~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~ 173 (582)
++.|+|.... ...+.| +||||||+|+||.++|+.|+.. |++|++.++...+. + .+.. ..+.+
T Consensus 107 ~~~g~w~~~~-~~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~-----~~~~----~~~l~ 168 (290)
T 3gvx_A 107 MKAGIFRQSP-TTLLYG-KALGILGYGGIGRRVAHLAKAF------GMRVIAYTRSSVDQ-N-----VDVI----SESPA 168 (290)
T ss_dssp HHTTCCCCCC-CCCCTT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSCCCT-T-----CSEE----CSSHH
T ss_pred hhhcccccCC-ceeeec-chheeeccCchhHHHHHHHHhh------CcEEEEEecccccc-c-----cccc----cCChH
Confidence 3456665542 367899 9999999999999999999998 99987776653321 1 1332 46899
Q ss_pred hhhccCCeEEEeccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCChhhH
Q 007987 174 ETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (582)
Q Consensus 174 Eav~~ADIVILaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg~~v 244 (582)
+++++||+|++++|.... ..++ ++.++.||+|++|+.++ |-. +..+++..+ .....||....|. +.
T Consensus 169 ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i-~ga~lDV~~~EP~---~p- 243 (290)
T 3gvx_A 169 DLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSD-VWYLSDVWWNEPE---IT- 243 (290)
T ss_dssp HHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTT-CEEEESCCTTTTS---CC-
T ss_pred HHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccc-eEEeeccccCCcc---cc-
Confidence 999999999999996444 4455 46889999999998775 431 223333222 2235677766774 11
Q ss_pred HHHHhhcccccCCCceEEEeecc--CCCHHHHHHH
Q 007987 245 RRLYVQGKEINGAGINSSFAVHQ--DVDGRATNVA 277 (582)
Q Consensus 245 R~ly~~G~e~~G~Gv~aliAv~q--d~tgeale~a 277 (582)
+| .--+.+++||- ..+.++.+.+
T Consensus 244 --L~--------~~~nvilTPHiag~~t~e~~~~~ 268 (290)
T 3gvx_A 244 --ET--------NLRNAILSPHVAGGMSGEIMDIA 268 (290)
T ss_dssp --SC--------CCSSEEECCSCSSCBTTBCCHHH
T ss_pred --hh--------hhhhhhcCccccCCccchHHHHH
Confidence 12 23578899983 3455444433
No 81
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.99 E-value=8.2e-10 Score=114.68 Aligned_cols=148 Identities=19% Similarity=0.255 Sum_probs=101.4
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
...+.| +||||||+|+||+++|+.|+.. |++|++.++.. ...+.+.+.|+. ..+.++++++||+|++
T Consensus 140 ~~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~-~~~~~~~~~g~~-----~~~l~ell~~aDvV~l 206 (330)
T 4e5n_A 140 GTGLDN-ATVGFLGMGAIGLAMADRLQGW------GATLQYHEAKA-LDTQTEQRLGLR-----QVACSELFASSDFILL 206 (330)
T ss_dssp CCCSTT-CEEEEECCSHHHHHHHHHTTTS------CCEEEEECSSC-CCHHHHHHHTEE-----ECCHHHHHHHCSEEEE
T ss_pred CCccCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCCC-CcHhHHHhcCce-----eCCHHHHHhhCCEEEE
Confidence 467899 9999999999999999999887 99987666543 345566677876 3589999999999999
Q ss_pred eccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEec-------cCCChhhHHHHH
Q 007987 185 LISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVC-------PKGMGPSVRRLY 248 (582)
Q Consensus 185 aVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~-------Pngpg~~vR~ly 248 (582)
++|.... ..++ ++.++.||+|++|+.++ |-. +..++++.+. ...+||.-.. |--+.+. ++
T Consensus 207 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~-gA~lDV~~~E~~~~~~~Pl~~~~~---L~ 282 (330)
T 4e5n_A 207 ALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLG-GYAADVFEMEDWARADRPQQIDPA---LL 282 (330)
T ss_dssp CCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE-EEEESCCGGGCTTCTTCCSSCCHH---HH
T ss_pred cCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCcc-EEEecccccccccccCCCCCCCch---HH
Confidence 9996543 3455 47889999999998665 321 2233332221 2345666555 5322222 34
Q ss_pred hhcccccCCCceEEEeecc-CCCHHHHHHH
Q 007987 249 VQGKEINGAGINSSFAVHQ-DVDGRATNVA 277 (582)
Q Consensus 249 ~~G~e~~G~Gv~aliAv~q-d~tgeale~a 277 (582)
.. -+.+++||- ..|.++.+..
T Consensus 283 ~~--------~nvilTPHia~~t~e~~~~~ 304 (330)
T 4e5n_A 283 AH--------PNTLFTPHIGSAVRAVRLEI 304 (330)
T ss_dssp TC--------SSEEECSSCTTCCHHHHHHH
T ss_pred cC--------CCEEECCcCCCChHHHHHHH
Confidence 32 477889986 4555554443
No 82
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.99 E-value=9.4e-10 Score=112.91 Aligned_cols=152 Identities=11% Similarity=0.026 Sum_probs=99.2
Q ss_pred eccccccccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHh
Q 007987 95 RGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE 174 (582)
Q Consensus 95 ~~~r~~f~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~E 174 (582)
+.|+|........+.| ++|||||+|+||.++|+.|+.. |++|++.++... + .+... ..++++
T Consensus 109 ~~g~w~~~~~~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~dr~~~---~----~~~~~----~~~l~e 170 (303)
T 1qp8_A 109 KRGDYGRDVEIPLIQG-EKVAVLGLGEIGTRVGKILAAL------GAQVRGFSRTPK---E----GPWRF----TNSLEE 170 (303)
T ss_dssp HTTCCCCCSCCCCCTT-CEEEEESCSTHHHHHHHHHHHT------TCEEEEECSSCC---C----SSSCC----BSCSHH
T ss_pred HcCCCCCCCCCCCCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcc---c----cCccc----CCCHHH
Confidence 4456643212246899 9999999999999999999988 999877665432 1 13332 457889
Q ss_pred hhccCCeEEEeccchhH-HHHHH-HHHhcCCCCcEEEEecCch-------hhhhhcccccCCCCCcEEEeccCCChhhHH
Q 007987 175 TISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVR 245 (582)
Q Consensus 175 av~~ADIVILaVPd~a~-~~Vl~-eI~~~Lk~GaiL~~a~G~~-------i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR 245 (582)
++++||+|++++|.... ..++. ++.+.||+|++|+.++--. ...+.++.+ .....+|.. ...|...-.
T Consensus 171 ll~~aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i-~gA~lDv~~--~~ep~~~~~ 247 (303)
T 1qp8_A 171 ALREARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQ-FIFASDVWW--GRNDFAKDA 247 (303)
T ss_dssp HHTTCSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTT-CEEEESCCT--TTTCCGGGH
T ss_pred HHhhCCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCc-eEEEeccCC--CCCCCCCCC
Confidence 99999999999998754 55664 6889999999998775322 122322221 112333330 233433334
Q ss_pred HHHhhcccccCCCceEEEeeccCC---CHHHHH
Q 007987 246 RLYVQGKEINGAGINSSFAVHQDV---DGRATN 275 (582)
Q Consensus 246 ~ly~~G~e~~G~Gv~aliAv~qd~---tgeale 275 (582)
.+|.. -+.+++||... +.+..+
T Consensus 248 ~L~~~--------~nviltPH~~~~~~t~e~~~ 272 (303)
T 1qp8_A 248 EFFSL--------PNVVATPWVAGGYGNERVWR 272 (303)
T ss_dssp HHHTS--------TTEEECCSCSSSSSCHHHHH
T ss_pred hhhcC--------CCEEECCCcCCCCCCHHHHH
Confidence 56653 67889999743 566543
No 83
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.98 E-value=5.8e-09 Score=112.37 Aligned_cols=201 Identities=12% Similarity=0.110 Sum_probs=120.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-------------------cC-ceecCCCcCC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTLGD 171 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-------------------~G-~~~~d~t~~~ 171 (582)
+||+|||+|.||.++|..|.+. |++|++.+++. ...+...+ .| +.. ..+
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~------G~~V~~~D~~~-~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~----t~d 71 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL------GANVRCIDTDR-NKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF----GTE 71 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE----ESC
T ss_pred CEEEEECcCHHHHHHHHHHHhc------CCEEEEEECCH-HHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE----ECC
Confidence 6999999999999999999999 99987665543 32333322 11 222 457
Q ss_pred HHhhhccCCeEEEeccch----------hHHHHHHHHHhcCCCCcEEEEecCchhh-------hhhcccccCC--CCCcE
Q 007987 172 IYETISGSDLVLLLISDA----------AQADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFP--KNIGV 232 (582)
Q Consensus 172 ~~Eav~~ADIVILaVPd~----------a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~-------~~~~~~i~~p--~dv~V 232 (582)
+++++++||+||+++|.. ...+++++|.+++++|++|++.+.+... .+.+...... .+..
T Consensus 72 ~~ea~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~- 150 (450)
T 3gg2_A 72 IEQAVPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFD- 150 (450)
T ss_dssp HHHHGGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEE-
T ss_pred HHHHHhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCccee-
Confidence 888999999999999977 6788999999999999999887765311 1111000011 2233
Q ss_pred EEeccCC--ChhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCC--ccccccccccccccchhhhhh
Q 007987 233 IAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSP--FTFATTLEQEYRSDIFGERIL 308 (582)
Q Consensus 233 I~v~Png--pg~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~--~~iettf~~E~~sDlfgEqvL 308 (582)
+...|.. +|..+++... .+.++ +.. .++++.+.+..++..++.. .++.+.. ...+.-.+.+...
T Consensus 151 v~~~Pe~a~eG~~~~~~~~---------p~~iv-vG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~-~~aE~~Kl~~N~~ 218 (450)
T 3gg2_A 151 IASNPEFLKEGNAIDDFMK---------PDRVV-VGV-DSDRARELITSLYKPMLLNNFRVLFMDI-ASAEMTKYAANAM 218 (450)
T ss_dssp EEECCCCCCTTSHHHHHHS---------CSCEE-EEE-SSHHHHHHHHHHHTTTCCSCCCEEEECH-HHHHHHHHHHHHH
T ss_pred EEechhhhcccchhhhccC---------CCEEE-EEc-CCHHHHHHHHHHHHHHhcCCCeEEecCH-HHHHHHHHHHHHH
Confidence 4456643 2333222111 12222 222 1568899999999998862 1222221 1111112222222
Q ss_pred hchHHHHHHHHHHHHHHcCCCHHHHHHH
Q 007987 309 LGAVHGIVESLFRRFTENGMNEDLAYKN 336 (582)
Q Consensus 309 sG~~pAlieAl~d~lVe~Gl~pe~Ay~~ 336 (582)
.....+++..+...+.+.|+++++.+..
T Consensus 219 ~a~~ia~~nE~~~l~~~~Gid~~~v~~~ 246 (450)
T 3gg2_A 219 LATRISFMNDVANLCERVGADVSMVRLG 246 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 3333345666667777889988865543
No 84
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.98 E-value=8.4e-10 Score=114.78 Aligned_cols=152 Identities=21% Similarity=0.246 Sum_probs=100.7
Q ss_pred eecccccccc--ccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCC
Q 007987 94 VRGGRDLFNL--LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD 171 (582)
Q Consensus 94 ~~~~r~~f~~--~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~ 171 (582)
++.|+|.... ....+.| ++|||||+|+||.++|+.|+.. |++|++.++...+. .|+.. ..+
T Consensus 146 ~~~g~w~~~~~~~~~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~dr~~~~~------~g~~~----~~~ 208 (333)
T 3ba1_A 146 VRRGAWKFGDFKLTTKFSG-KRVGIIGLGRIGLAVAERAEAF------DCPISYFSRSKKPN------TNYTY----YGS 208 (333)
T ss_dssp HHTTGGGGCCCCCCCCCTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEECSSCCTT------CCSEE----ESC
T ss_pred HHcCCCCccccccccccCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCchhc------cCcee----cCC
Confidence 4556664321 2357899 9999999999999999999988 99987766653321 25553 468
Q ss_pred HHhhhccCCeEEEeccchh-HHHHH-HHHHhcCCCCcEEEEec-Cchh------hhhhcccccCCCCCcEEEeccCCChh
Q 007987 172 IYETISGSDLVLLLISDAA-QADNY-EKIFSCMKPNSILGLSH-GFLL------GHLQSMGLDFPKNIGVIAVCPKGMGP 242 (582)
Q Consensus 172 ~~Eav~~ADIVILaVPd~a-~~~Vl-~eI~~~Lk~GaiL~~a~-G~~i------~~~~~~~i~~p~dv~VI~v~Pngpg~ 242 (582)
.++++++||+|++++|+.. ...++ +++.+.|++|++|+.++ |..+ ..+.+..+ -...+||+..+|. |.+
T Consensus 209 l~ell~~aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i-~ga~lDv~~~EP~-~~~ 286 (333)
T 3ba1_A 209 VVELASNSDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRL-GGAGLDVFEREPE-VPE 286 (333)
T ss_dssp HHHHHHTCSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSS-CEEEESCCTTTTC-CCG
T ss_pred HHHHHhcCCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCC-eEEEEecCCCCCC-Ccc
Confidence 8999999999999999864 45566 46778899999887554 4321 12222111 1124577777774 222
Q ss_pred hHHHHHhhcccccCCCceEEEeecc-CCCHHHHH
Q 007987 243 SVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATN 275 (582)
Q Consensus 243 ~vR~ly~~G~e~~G~Gv~aliAv~q-d~tgeale 275 (582)
. +|. ..+.+++||. ..|.++.+
T Consensus 287 ~---L~~--------~~nviltPH~~~~t~e~~~ 309 (333)
T 3ba1_A 287 K---LFG--------LENVVLLPHVGSGTVETRK 309 (333)
T ss_dssp G---GGG--------CTTEEECSSCTTCSHHHHH
T ss_pred h---hhc--------CCCEEECCcCCCCCHHHHH
Confidence 2 343 3677889886 34555443
No 85
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.98 E-value=1.1e-09 Score=114.46 Aligned_cols=154 Identities=19% Similarity=0.210 Sum_probs=95.0
Q ss_pred eeccccccc---cccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcC
Q 007987 94 VRGGRDLFN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (582)
Q Consensus 94 ~~~~r~~f~---~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~ 170 (582)
++.|+|... .....+.| |||||||+|+||.++|+.|+.. |++|++.++...+ ..++.. ..
T Consensus 152 ~~~g~W~~~~~~~~~~~l~g-ktiGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~------~~~~~~----~~ 214 (340)
T 4dgs_A 152 VREGRWAAGEQLPLGHSPKG-KRIGVLGLGQIGRALASRAEAF------GMSVRYWNRSTLS------GVDWIA----HQ 214 (340)
T ss_dssp HHTTCC------CCCCCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSCCT------TSCCEE----CS
T ss_pred HhcCCcccccCcCccccccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCccc------ccCcee----cC
Confidence 345566432 12367999 9999999999999999999988 9998776665332 234443 56
Q ss_pred CHHhhhccCCeEEEeccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCCh
Q 007987 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMG 241 (582)
Q Consensus 171 ~~~Eav~~ADIVILaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg 241 (582)
+++|++++||+|++++|.... ..++ +++++.||+|++|+.++ |-. +..++++.+ -...+||.--.|..+.
T Consensus 215 sl~ell~~aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i-~gA~LDVf~~EP~~~~ 293 (340)
T 4dgs_A 215 SPVDLARDSDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTI-AGAGLDVFVNEPAIRS 293 (340)
T ss_dssp SHHHHHHTCSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCS-SEEEESCCSSSSSCCS
T ss_pred CHHHHHhcCCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCc-eEEEeCCcCCCCCCcc
Confidence 899999999999999996554 4566 47888999999988664 422 122222212 1235677777774332
Q ss_pred hhHHHHHhhcccccCCCceEEEeecc-CCCHHHHHHH
Q 007987 242 PSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVA 277 (582)
Q Consensus 242 ~~vR~ly~~G~e~~G~Gv~aliAv~q-d~tgeale~a 277 (582)
.++.. -+.+++||- ..|.++.+..
T Consensus 294 ----~L~~~--------~nvilTPHia~~t~e~~~~~ 318 (340)
T 4dgs_A 294 ----EFHTT--------PNTVLMPHQGSATVETRMAM 318 (340)
T ss_dssp ----HHHHS--------SSEEECSSCSSCCHHHHHHH
T ss_pred ----chhhC--------CCEEEcCcCCcCCHHHHHHH
Confidence 34443 467889986 4555554443
No 86
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.96 E-value=1.2e-09 Score=112.54 Aligned_cols=140 Identities=19% Similarity=0.162 Sum_probs=96.0
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
...+.| ++|||||+|+||.++|+.|+.. |++|++.++...+.. +. ..+.++++++||+|++
T Consensus 139 ~~~l~g-~~vgIIG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~~-------~~-----~~~l~ell~~aDvV~l 199 (311)
T 2cuk_A 139 GLDLQG-LTLGLVGMGRIGQAVAKRALAF------GMRVVYHARTPKPLP-------YP-----FLSLEELLKEADVVSL 199 (311)
T ss_dssp BCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSSS-------SC-----BCCHHHHHHHCSEEEE
T ss_pred CcCCCC-CEEEEEEECHHHHHHHHHHHHC------CCEEEEECCCCcccc-------cc-----cCCHHHHHhhCCEEEE
Confidence 457899 9999999999999999999988 999877666543321 22 4578899999999999
Q ss_pred eccchh-HHHHHH-HHHhcCCCCcEEEEecCch-------hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhccccc
Q 007987 185 LISDAA-QADNYE-KIFSCMKPNSILGLSHGFL-------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEIN 255 (582)
Q Consensus 185 aVPd~a-~~~Vl~-eI~~~Lk~GaiL~~a~G~~-------i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~ 255 (582)
++|+.. ...++. +..+.||+|++|+.++.-. ...+. +.+ ....++|+..+|..+.+. +|.
T Consensus 200 ~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i-~ga~lDv~~~eP~~~~~~---L~~------ 268 (311)
T 2cuk_A 200 HTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALR-GHL-FGAGLDVTDPEPLPPGHP---LYA------ 268 (311)
T ss_dssp CCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTS-SEEEESSCSSSSCCTTSG---GGG------
T ss_pred eCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcC-CEEEEeeCCCCCCCCCCh---hhh------
Confidence 999875 455664 6778899999988665322 11222 111 113567777777433332 444
Q ss_pred CCCceEEEeecc-CCCHHHHHH
Q 007987 256 GAGINSSFAVHQ-DVDGRATNV 276 (582)
Q Consensus 256 G~Gv~aliAv~q-d~tgeale~ 276 (582)
.-+.+++||. ..|.++.+.
T Consensus 269 --~~nviltPh~~~~t~~~~~~ 288 (311)
T 2cuk_A 269 --LPNAVITPHIGSAGRTTRER 288 (311)
T ss_dssp --CTTEEECCSCTTCBHHHHHH
T ss_pred --CCCEEECCcCCCCCHHHHHH
Confidence 3688899987 344454433
No 87
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.95 E-value=8.1e-10 Score=115.84 Aligned_cols=159 Identities=14% Similarity=0.117 Sum_probs=106.6
Q ss_pred eeccccccc---cccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcC
Q 007987 94 VRGGRDLFN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (582)
Q Consensus 94 ~~~~r~~f~---~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~ 170 (582)
++.|+|... .....+.| ++|||||+|+||.++|+.|+.. |++|++.++. ....+.+.+.|+.. +.
T Consensus 145 ~~~g~W~~~~~~~~~~~l~g-ktvGIIG~G~IG~~vA~~l~~~------G~~V~~~dr~-~~~~~~~~~~g~~~----~~ 212 (351)
T 3jtm_A 145 VVKGEWNVAGIAYRAYDLEG-KTIGTVGAGRIGKLLLQRLKPF------GCNLLYHDRL-QMAPELEKETGAKF----VE 212 (351)
T ss_dssp HHTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCEEEEECSS-CCCHHHHHHHCCEE----CS
T ss_pred HHcCCCccccccCCcccccC-CEEeEEEeCHHHHHHHHHHHHC------CCEEEEeCCC-ccCHHHHHhCCCeE----cC
Confidence 345666532 12356899 9999999999999999999988 9998766654 33456677778874 56
Q ss_pred CHHhhhccCCeEEEeccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCCh
Q 007987 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMG 241 (582)
Q Consensus 171 ~~~Eav~~ADIVILaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg 241 (582)
++++++++||+|++++|.... ..++ .+.++.||+|++|+.++ |-. +..++++.+ .....||..-.|.-+.
T Consensus 213 ~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i-~ga~lDV~~~EP~~~~ 291 (351)
T 3jtm_A 213 DLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHI-GGYSGDVWDPQPAPKD 291 (351)
T ss_dssp CHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSE-EEEEESCCSSSSCCTT
T ss_pred CHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCc-cEEEeCCCCCCCCCCC
Confidence 899999999999999996533 4455 46788899999998665 321 223333222 1234566666664443
Q ss_pred hhHHHHHhhcccccCCCceEEEeecc-CCCHHHHHH
Q 007987 242 PSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (582)
Q Consensus 242 ~~vR~ly~~G~e~~G~Gv~aliAv~q-d~tgeale~ 276 (582)
+. ++.- -+.+++||- ..|.++.+.
T Consensus 292 ~p---L~~~--------~nvilTPHia~~t~ea~~~ 316 (351)
T 3jtm_A 292 HP---WRYM--------PNQAMTPHTSGTTIDAQLR 316 (351)
T ss_dssp CG---GGTS--------TTBCCCCSCGGGSHHHHHH
T ss_pred Ch---hhcC--------CCEEECCcCCCCCHHHHHH
Confidence 33 2221 356678884 455555443
No 88
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.95 E-value=8.8e-10 Score=115.35 Aligned_cols=145 Identities=19% Similarity=0.232 Sum_probs=98.6
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
...+.| |+|||||+|.||.++|+.|+.. |++|++.++... ..+.+ .|+.. +.++++++++||+|++
T Consensus 168 g~~l~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~-~~~~~--~g~~~----~~~l~ell~~sDvV~l 233 (345)
T 4g2n_A 168 GMGLTG-RRLGIFGMGRIGRAIATRARGF------GLAIHYHNRTRL-SHALE--EGAIY----HDTLDSLLGASDIFLI 233 (345)
T ss_dssp BCCCTT-CEEEEESCSHHHHHHHHHHHTT------TCEEEEECSSCC-CHHHH--TTCEE----CSSHHHHHHTCSEEEE
T ss_pred ccccCC-CEEEEEEeChhHHHHHHHHHHC------CCEEEEECCCCc-chhhh--cCCeE----eCCHHHHHhhCCEEEE
Confidence 467999 9999999999999999999987 999877666432 23322 27663 4589999999999999
Q ss_pred eccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhccccc
Q 007987 185 LISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEIN 255 (582)
Q Consensus 185 aVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~ 255 (582)
++|.... ..++ ++.++.||+|++|+.++ |-. +..++++.+ -...+||.--.| .+.+. ++..
T Consensus 234 ~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i-~gA~LDVf~~EP-~~~~p---L~~~----- 303 (345)
T 4g2n_A 234 AAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHL-FAAGLDVFANEP-AIDPR---YRSL----- 303 (345)
T ss_dssp CSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSE-EEEEESCCTTTT-SCCTT---GGGC-----
T ss_pred ecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCc-eEEEecCCCCCC-CCCch---HHhC-----
Confidence 9996544 4455 46788999999998765 321 333443322 223566776677 22222 2221
Q ss_pred CCCceEEEeecc-CCCHHHHHH
Q 007987 256 GAGINSSFAVHQ-DVDGRATNV 276 (582)
Q Consensus 256 G~Gv~aliAv~q-d~tgeale~ 276 (582)
-+.+++||- ..|.++.+.
T Consensus 304 ---~nvilTPHia~~t~e~~~~ 322 (345)
T 4g2n_A 304 ---DNIFLTPHIGSATHETRDA 322 (345)
T ss_dssp ---TTEEECCSCTTCBHHHHHH
T ss_pred ---CCEEEcCccCcCCHHHHHH
Confidence 468889986 345554443
No 89
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.95 E-value=5.9e-09 Score=112.98 Aligned_cols=203 Identities=12% Similarity=0.059 Sum_probs=116.2
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc-------------------CceecCCCcCC
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------------GFTEENGTLGD 171 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~-------------------G~~~~d~t~~~ 171 (582)
++||+|||+|.||.++|.+|.+. |.|++|++.+++ ....+...+. ++.. ..+
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~----g~g~~V~~~D~~-~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~----t~~ 79 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHK----CPHITVTVVDMN-TAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFF----SSD 79 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSC-HHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE----ESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECC-HHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEE----ECC
Confidence 37999999999999999999886 335787665543 3323332221 1221 346
Q ss_pred HHhhhccCCeEEEeccch---------------hHHHHHHHHHhcCCCCcEEEEecCchhh---hhhccccc-CC--CCC
Q 007987 172 IYETISGSDLVLLLISDA---------------AQADNYEKIFSCMKPNSILGLSHGFLLG---HLQSMGLD-FP--KNI 230 (582)
Q Consensus 172 ~~Eav~~ADIVILaVPd~---------------a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~---~~~~~~i~-~p--~dv 230 (582)
+.++++++|+||+++|.. ...++++.|.+++++|++|++.+.+... .+...... .+ .++
T Consensus 80 ~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~ 159 (481)
T 2o3j_A 80 IPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENL 159 (481)
T ss_dssp HHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----C
T ss_pred HHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCC
Confidence 678899999999998753 2567888899999999998876554321 11110000 11 123
Q ss_pred c-EEEeccC--CChhhHHHHHhhcccccCCCceEEEeecc-CCCHHHHHHHHHHHHHhCC-Cccccccccccccccchhh
Q 007987 231 G-VIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATNVALGWSVALGS-PFTFATTLEQEYRSDIFGE 305 (582)
Q Consensus 231 ~-VI~v~Pn--gpg~~vR~ly~~G~e~~G~Gv~aliAv~q-d~tgeale~alala~aiG~-~~~iettf~~E~~sDlfgE 305 (582)
+ .|..+|. .||..+.+++.. -..++.... ..+.++.+.+..++..+|. ..++.+.. ...+.-.
T Consensus 160 d~~v~~~Pe~~~~G~a~~~~~~~--------~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~-~~ae~~K--- 227 (481)
T 2o3j_A 160 KFQVLSNPEFLAEGTAMKDLANP--------DRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNT-WSSELSK--- 227 (481)
T ss_dssp CEEEEECCCCCCTTCHHHHHHSC--------SCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEH-HHHHHHH---
T ss_pred ceEEEeCcccccccchhhcccCC--------CEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCH-HHHHHHH---
Confidence 3 3567884 455544433321 122233221 1113577888999999985 21222211 1111111
Q ss_pred hhhhchH----HHHHHHHHHHHHHcCCCHHHHHH
Q 007987 306 RILLGAV----HGIVESLFRRFTENGMNEDLAYK 335 (582)
Q Consensus 306 qvLsG~~----pAlieAl~d~lVe~Gl~pe~Ay~ 335 (582)
.+.++. .+++..+...+.+.|+++++...
T Consensus 228 -l~~N~~~a~~ia~~nE~~~la~~~Gid~~~v~~ 260 (481)
T 2o3j_A 228 -LVANAFLAQRISSINSISAVCEATGAEISEVAH 260 (481)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 233333 34566666777788888876554
No 90
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.94 E-value=9.7e-10 Score=114.36 Aligned_cols=103 Identities=19% Similarity=0.123 Sum_probs=78.5
Q ss_pred eccccccc--cccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCH
Q 007987 95 RGGRDLFN--LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (582)
Q Consensus 95 ~~~r~~f~--~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~ 172 (582)
++|+|... .....|.| +||||||+|+||+++|+.|+.. |++|+++++...+. ..+.|+. ..++
T Consensus 124 ~~g~w~~~~~~~~~~l~g-~tvgIiG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~~---~~~~g~~-----~~~l 188 (334)
T 2pi1_A 124 KKLNFSQDSEILARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVKRED---LKEKGCV-----YTSL 188 (334)
T ss_dssp TTTCCCCCGGGCBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHH---HHHTTCE-----ECCH
T ss_pred HcCCCccccCccceeccC-ceEEEECcCHHHHHHHHHHHHC------cCEEEEECCCcchh---hHhcCce-----ecCH
Confidence 44555432 23567899 9999999999999999999988 99987766654332 2246776 3569
Q ss_pred HhhhccCCeEEEeccchhH-HHHH-HHHHhcCCCCcEEEEec
Q 007987 173 YETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (582)
Q Consensus 173 ~Eav~~ADIVILaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~ 212 (582)
+|++++||+|++++|.... ..++ ++.++.||+|++|+.++
T Consensus 189 ~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~a 230 (334)
T 2pi1_A 189 DELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTA 230 (334)
T ss_dssp HHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECS
T ss_pred HHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECC
Confidence 9999999999999996533 3455 46788999999998765
No 91
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.93 E-value=3.1e-09 Score=108.37 Aligned_cols=164 Identities=20% Similarity=0.166 Sum_probs=106.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecC---C--------CcCCHHhhhccCC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---G--------TLGDIYETISGSD 180 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d---~--------t~~~~~Eav~~AD 180 (582)
++|+|||+|+||.++|..|.++ |.+|.+..|+. .+..++.|+...+ + ...+.+++.+.+|
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~------g~~V~~~~r~~---~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~D 73 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKT------GHCVSVVSRSD---YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPD 73 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHT------TCEEEEECSTT---HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCeEEEEeCCh---HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCC
Confidence 6999999999999999999998 99888777753 3555566754311 1 1235666666899
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEE-EEecCch-hhhhhcccccCCCCCcEEEecc------CCChhhHHHHHhhcc
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFL-LGHLQSMGLDFPKNIGVIAVCP------KGMGPSVRRLYVQGK 252 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL-~~a~G~~-i~~~~~~~i~~p~dv~VI~v~P------ngpg~~vR~ly~~G~ 252 (582)
+||++||.....+++++|.++++++++| ++..|+. ...+.+ .+|.+ .|+.... ..|+.+. .+
T Consensus 74 lVilavK~~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~---~~~~~-~vl~g~~~~~a~~~~pg~v~-----~~- 143 (320)
T 3i83_A 74 CTLLCIKVVEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAA---AFPDN-EVISGLAFIGVTRTAPGEIW-----HQ- 143 (320)
T ss_dssp EEEECCCCCTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHH---HSTTS-CEEEEEEEEEEEEEETTEEE-----EE-
T ss_pred EEEEecCCCChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHH---HCCCC-cEEEEEEEeceEEcCCCEEE-----EC-
Confidence 9999999999999999999999988864 5778986 344544 34443 4443222 2344442 11
Q ss_pred cccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh
Q 007987 253 EINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER 306 (582)
Q Consensus 253 e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq 306 (582)
|.|... |......+.+..+...+++...|.. -+...|+.+.+
T Consensus 144 ---~~~~~~-ig~~~~~~~~~~~~l~~~l~~~~~~--------~~~~~di~~~~ 185 (320)
T 3i83_A 144 ---AYGRLM-LGNYPGGVSERVKTLAAAFEEAGID--------GIATENITTAR 185 (320)
T ss_dssp ---EEEEEE-EEESSSCCCHHHHHHHHHHHHTTSC--------EEECSCHHHHH
T ss_pred ---CCCEEE-EecCCCCccHHHHHHHHHHHhCCCC--------ceECHHHHHHH
Confidence 223222 4432223345566667778877753 23445666654
No 92
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.92 E-value=1.1e-09 Score=113.49 Aligned_cols=143 Identities=20% Similarity=0.192 Sum_probs=96.7
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
...+.| ++|||||+|.||.++|+.|+.. |++|++.++...+ +.+.+.|+. ..+.++++++||+|++
T Consensus 145 ~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~-----~~~l~~~l~~aDvVil 210 (334)
T 2dbq_A 145 GYDVYG-KTIGIIGLGRIGQAIAKRAKGF------NMRILYYSRTRKE--EVERELNAE-----FKPLEDLLRESDFVVL 210 (334)
T ss_dssp CCCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCH--HHHHHHCCE-----ECCHHHHHHHCSEEEE
T ss_pred ccCCCC-CEEEEEccCHHHHHHHHHHHhC------CCEEEEECCCcch--hhHhhcCcc-----cCCHHHHHhhCCEEEE
Confidence 357889 9999999999999999999988 9998776665433 555566776 3588899999999999
Q ss_pred eccchhH-HHHH-HHHHhcCCCCcEEEEec-Cchh------hhhhcccccCCCCCcEEEeccCCChhhHHHHHhhccccc
Q 007987 185 LISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFLL------GHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGKEIN 255 (582)
Q Consensus 185 aVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~i------~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~e~~ 255 (582)
++|.... ..++ +++.+.|++|++|+.++ |..+ ..+.++.+. ....+|....| | ....+|..
T Consensus 211 ~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~-ga~lDv~~~EP--~--~~~~L~~~----- 280 (334)
T 2dbq_A 211 AVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIA-GAGLDVFEEEP--Y--YNEELFKL----- 280 (334)
T ss_dssp CCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS-EEEESCCSSSS--C--CCHHHHHC-----
T ss_pred CCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCee-EEEecCCCCCC--C--CCchhhcC-----
Confidence 9998774 4566 46788899999887554 4321 122221111 12345554445 2 12234542
Q ss_pred CCCceEEEeecc-CCCHHHH
Q 007987 256 GAGINSSFAVHQ-DVDGRAT 274 (582)
Q Consensus 256 G~Gv~aliAv~q-d~tgeal 274 (582)
.+.+++||. ..+.+..
T Consensus 281 ---~~vi~tPh~~~~t~~~~ 297 (334)
T 2dbq_A 281 ---DNVVLTPHIGSASFGAR 297 (334)
T ss_dssp ---TTEEECSSCTTCSHHHH
T ss_pred ---CCEEECCccCCCcHHHH
Confidence 578888886 3344433
No 93
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.91 E-value=1.4e-09 Score=112.94 Aligned_cols=147 Identities=12% Similarity=0.122 Sum_probs=98.6
Q ss_pred eccccccccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHh
Q 007987 95 RGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE 174 (582)
Q Consensus 95 ~~~r~~f~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~E 174 (582)
++|+|........+.| ++|||||+|.||.++|+.|+.. |++|++.++...+. +.+ ...+. ..++++
T Consensus 122 ~~~~W~~~~~~~~l~g-ktvGIiGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~~~-~~~~~-----~~~l~e 187 (324)
T 3evt_A 122 GARQWALPMTTSTLTG-QQLLIYGTGQIGQSLAAKASAL------GMHVIGVNTTGHPA-DHF-HETVA-----FTATAD 187 (324)
T ss_dssp TTCCSSCSSCCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSCCCC-TTC-SEEEE-----GGGCHH
T ss_pred hcCCcccCCCCccccC-CeEEEECcCHHHHHHHHHHHhC------CCEEEEECCCcchh-HhH-hhccc-----cCCHHH
Confidence 4456654433578999 9999999999999999999988 99987776653321 111 11122 357889
Q ss_pred hhccCCeEEEeccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCChhhHH
Q 007987 175 TISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVR 245 (582)
Q Consensus 175 av~~ADIVILaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR 245 (582)
++++||+|++++|.... ..++ .+.+..||+|++|+.++ |-. +..++++.+ -....||....|.-+.+.
T Consensus 188 ll~~aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i-~gA~lDV~~~EPl~~~~p-- 264 (324)
T 3evt_A 188 ALATANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQL-SMAALDVTEPEPLPTDHP-- 264 (324)
T ss_dssp HHHHCSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSC-SEEEESSCSSSSCCTTCG--
T ss_pred HHhhCCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCc-eEEEeCCCCCCCCCCCCh--
Confidence 99999999999996544 4455 46888999999998765 321 233333222 123567777777444333
Q ss_pred HHHhhcccccCCCceEEEeecc
Q 007987 246 RLYVQGKEINGAGINSSFAVHQ 267 (582)
Q Consensus 246 ~ly~~G~e~~G~Gv~aliAv~q 267 (582)
++.. -+.+++||-
T Consensus 265 -L~~~--------~nvilTPHi 277 (324)
T 3evt_A 265 -LWQR--------DDVLITPHI 277 (324)
T ss_dssp -GGGC--------SSEEECCSC
T ss_pred -hhcC--------CCEEEcCcc
Confidence 3332 467889986
No 94
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.90 E-value=9.4e-09 Score=105.01 Aligned_cols=101 Identities=18% Similarity=0.256 Sum_probs=76.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCC---------CcCCHHhhhccCCeE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG---------TLGDIYETISGSDLV 182 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~---------t~~~~~Eav~~ADIV 182 (582)
++|+|||.|+||.++|..|.++ |++|.+. ++ ++..+...+.|+..... ...+.+ .++.+|+|
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~------G~~V~l~-~~-~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~v 90 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARA------GHEVILI-AR-PQHVQAIEATGLRLETQSFDEQVKVSASSDPS-AVQGADLV 90 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT------TCEEEEE-CC-HHHHHHHHHHCEEEECSSCEEEECCEEESCGG-GGTTCSEE
T ss_pred CcEEEECcCHHHHHHHHHHHHC------CCeEEEE-Ec-HhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH-HcCCCCEE
Confidence 8999999999999999999998 9888766 43 34456666667543100 013443 46889999
Q ss_pred EEeccchhHHHHHHHHHhcCCCCcEE-EEecCchh-hhhhc
Q 007987 183 LLLISDAAQADNYEKIFSCMKPNSIL-GLSHGFLL-GHLQS 221 (582)
Q Consensus 183 ILaVPd~a~~~Vl~eI~~~Lk~GaiL-~~a~G~~i-~~~~~ 221 (582)
|++||.....+++++|.++++++++| +...|+.. ..+.+
T Consensus 91 ilavk~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~ 131 (318)
T 3hwr_A 91 LFCVKSTDTQSAALAMKPALAKSALVLSLQNGVENADTLRS 131 (318)
T ss_dssp EECCCGGGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHH
T ss_pred EEEcccccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHH
Confidence 99999999999999999999999865 57889875 34433
No 95
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.90 E-value=1.4e-09 Score=113.70 Aligned_cols=144 Identities=19% Similarity=0.156 Sum_probs=98.6
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+.| ++|||||+|.||.++|+.|+.. |++|++.++...+ ..+.+.|+.. +.++++++++||+|+++
T Consensus 164 ~~l~g-~tvGIIG~G~IG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~----~~~l~ell~~aDvV~l~ 230 (347)
T 1mx3_A 164 ARIRG-ETLGIIGLGRVGQAVALRAKAF------GFNVLFYDPYLSD--GVERALGLQR----VSTLQDLLFHSDCVTLH 230 (347)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECTTSCT--THHHHHTCEE----CSSHHHHHHHCSEEEEC
T ss_pred cCCCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCCcch--hhHhhcCCee----cCCHHHHHhcCCEEEEc
Confidence 46899 9999999999999999999988 9998777665433 2345567763 45889999999999999
Q ss_pred ccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCC-hhhHHHHHhhccccc
Q 007987 186 ISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGM-GPSVRRLYVQGKEIN 255 (582)
Q Consensus 186 VPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngp-g~~vR~ly~~G~e~~ 255 (582)
+|.... ..++ ++.++.||+|++|+.++ |-. ...++++++. ....+|+..+|..+ .+. ++
T Consensus 231 ~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~-gA~lDV~~~EP~~~~~~~---L~------- 299 (347)
T 1mx3_A 231 CGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIR-GAALDVHESEPFSFSQGP---LK------- 299 (347)
T ss_dssp CCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEE-EEEESCCSSSSCCTTSST---TT-------
T ss_pred CCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCc-EEEEeecccCCCCCCCch---HH-------
Confidence 998643 4566 46788999999988664 321 2233332221 23467777777421 222 11
Q ss_pred CCCceEEEeeccC-CCHHHH
Q 007987 256 GAGINSSFAVHQD-VDGRAT 274 (582)
Q Consensus 256 G~Gv~aliAv~qd-~tgeal 274 (582)
.--+.++++|-. .+.+..
T Consensus 300 -~~~nvi~tPHia~~t~~~~ 318 (347)
T 1mx3_A 300 -DAPNLICTPHAAWYSEQAS 318 (347)
T ss_dssp -TCSSEEECSSCTTCCHHHH
T ss_pred -hCCCEEEEchHHHHHHHHH
Confidence 125778888863 444444
No 96
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.89 E-value=2.2e-09 Score=114.28 Aligned_cols=158 Identities=15% Similarity=0.032 Sum_probs=106.0
Q ss_pred eeccccccc---cccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcC
Q 007987 94 VRGGRDLFN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG 170 (582)
Q Consensus 94 ~~~~r~~f~---~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~ 170 (582)
+++|+|... .....+.| ++|||||+|.||.++|+.|+.. |++|++.++.. ...+.+.+.|+.. ..
T Consensus 172 ~~~g~W~~~~~~~~~~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~~-~~~~~~~~~G~~~----~~ 239 (393)
T 2nac_A 172 ARKGGWNIADCVSHAYDLEA-MHVGTVAAGRIGLAVLRRLAPF------DVHLHYTDRHR-LPESVEKELNLTW----HA 239 (393)
T ss_dssp HHTTCCCHHHHHTTCCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSC-CCHHHHHHHTCEE----CS
T ss_pred HHcCCCCccccccCCccCCC-CEEEEEeECHHHHHHHHHHHhC------CCEEEEEcCCc-cchhhHhhcCcee----cC
Confidence 455677431 11356899 9999999999999999999988 99987666543 3345666778873 45
Q ss_pred CHHhhhccCCeEEEeccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCCh
Q 007987 171 DIYETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMG 241 (582)
Q Consensus 171 ~~~Eav~~ADIVILaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg 241 (582)
+.++++++||+|++++|.... ..++ ++.++.||+|++|+.++ |-. ...++++.+ ....+||+..+|..+.
T Consensus 240 ~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i-~gA~lDV~~~EP~~~~ 318 (393)
T 2nac_A 240 TREDMYPVCDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRL-AGYAGDVWFPQPAPKD 318 (393)
T ss_dssp SHHHHGGGCSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSE-EEEEESCCSSSSCCTT
T ss_pred CHHHHHhcCCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCe-eEEEEEecCCCCCCCC
Confidence 789999999999999996533 4566 46788999999988554 421 222333222 1234677777775444
Q ss_pred hhHHHHHhhcccccCCCceEEEeecc-CCCHHHHH
Q 007987 242 PSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATN 275 (582)
Q Consensus 242 ~~vR~ly~~G~e~~G~Gv~aliAv~q-d~tgeale 275 (582)
+. +|. .-+.+++||- ..|.++.+
T Consensus 319 ~p---L~~--------~~nvilTPHia~~T~e~~~ 342 (393)
T 2nac_A 319 HP---WRT--------MPYNGMTPHISGTTLTAQA 342 (393)
T ss_dssp CG---GGT--------STTBCCCCSCTTCSHHHHH
T ss_pred Ch---hHc--------CCCEEECCCCCcCcHHHHH
Confidence 43 332 2466788886 44554443
No 97
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.89 E-value=3.7e-08 Score=106.13 Aligned_cols=204 Identities=14% Similarity=0.094 Sum_probs=116.5
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHH---------------HH----cCceecCCCcCC
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA---------------RA----AGFTEENGTLGD 171 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A---------------~~----~G~~~~d~t~~~ 171 (582)
|+||+|||+|.||.++|.+|.+. |.|++|++.+++..+ .+.. .+ .++.. ..+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~----g~G~~V~~~d~~~~~-~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~----t~~ 75 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHM----CPEIRVTVVDVNESR-INAWNSPTLPIYEPGLKEVVESCRGKNLFF----STN 75 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHH----CTTSEEEEECSCHHH-HHHHTSSSCSSCCTTHHHHHHHHBTTTEEE----ESC
T ss_pred ccEEEEECCCHHHHHHHHHHHhc----CCCCEEEEEECCHHH-HHHHhCCCCCcCCCCHHHHHHHhhcCCEEE----ECC
Confidence 47999999999999999999876 335787666554322 2221 11 23432 457
Q ss_pred HHhhhccCCeEEEeccchh---------------HHHHHHHHHhcCCCCcEEEEecCchhh-------hhhcccccCCCC
Q 007987 172 IYETISGSDLVLLLISDAA---------------QADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKN 229 (582)
Q Consensus 172 ~~Eav~~ADIVILaVPd~a---------------~~~Vl~eI~~~Lk~GaiL~~a~G~~i~-------~~~~~~i~~p~d 229 (582)
++++++++|+||+++|... ..++.++|.+++++|++|++.+.+... .+++ .....
T Consensus 76 ~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~---~~~~~ 152 (467)
T 2q3e_A 76 IDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDA---NTKPN 152 (467)
T ss_dssp HHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHH---TCCTT
T ss_pred HHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHH---hCCCC
Confidence 7889999999999998543 356777899999999988876543211 1222 11122
Q ss_pred Cc-EEEeccC--CChhhHHHHHhhcccccCCCceEEEee-ccCCCHHHHHHHHHHHHHh-CCCccccccccccccccchh
Q 007987 230 IG-VIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAV-HQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYRSDIFG 304 (582)
Q Consensus 230 v~-VI~v~Pn--gpg~~vR~ly~~G~e~~G~Gv~aliAv-~qd~tgeale~alala~ai-G~~~~iettf~~E~~sDlfg 304 (582)
++ .|...|. .|+..+.+++.. -..++.. ....+++..+.+..++..+ |...++.+.. ...+.-.+.
T Consensus 153 ~d~~V~~~Pe~~~~G~~~~d~~~~--------~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~-~~ae~~Kl~ 223 (467)
T 2q3e_A 153 LNLQVLSNPEFLAEGTAIKDLKNP--------DRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNT-WSSELSKLA 223 (467)
T ss_dssp CEEEEEECCCCCCTTSHHHHHHSC--------SCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECH-HHHHHHHHH
T ss_pred CCeEEEeCHHHhhcccchhhccCC--------CEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCH-HHHHHHHHH
Confidence 33 3445564 345544433332 1122332 1113567889999999998 5431221111 101111111
Q ss_pred hhhhhchHHHHHHHHHHHHHHcCCCHHHHHH
Q 007987 305 ERILLGAVHGIVESLFRRFTENGMNEDLAYK 335 (582)
Q Consensus 305 EqvLsG~~pAlieAl~d~lVe~Gl~pe~Ay~ 335 (582)
+..+.....+++..+...+.+.|+++++...
T Consensus 224 ~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~ 254 (467)
T 2q3e_A 224 ANAFLAQRISSINSISALCEATGADVEEVAT 254 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 1111222234566666777788888876544
No 98
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.89 E-value=1.5e-09 Score=114.01 Aligned_cols=163 Identities=16% Similarity=0.060 Sum_probs=107.1
Q ss_pred eeccccccc---cccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCce-EEEEecCCcccHHHHHHcCceecCCCc
Q 007987 94 VRGGRDLFN---LLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGTL 169 (582)
Q Consensus 94 ~~~~r~~f~---~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~-ViVg~r~~sks~~~A~~~G~~~~d~t~ 169 (582)
++.|+|.+. .....+.| ++|||||+|+||.++|+.|+.. |++ |++.++.. ...+.+.+.|+.. +
T Consensus 145 ~~~g~W~~~~~~~~~~~l~g-~tvgIIG~G~IG~~vA~~l~~~------G~~~V~~~d~~~-~~~~~~~~~g~~~----~ 212 (364)
T 2j6i_A 145 IINHDWEVAAIAKDAYDIEG-KTIATIGAGRIGYRVLERLVPF------NPKELLYYDYQA-LPKDAEEKVGARR----V 212 (364)
T ss_dssp HHTTCCCHHHHHTTCCCSTT-CEEEEECCSHHHHHHHHHHGGG------CCSEEEEECSSC-CCHHHHHHTTEEE----C
T ss_pred HHhCCCCcCcccCCcccCCC-CEEEEECcCHHHHHHHHHHHhC------CCcEEEEECCCc-cchhHHHhcCcEe----c
Confidence 345666431 12457899 9999999999999999999988 996 87666543 3355667788764 4
Q ss_pred CCHHhhhccCCeEEEeccchhH-HHHHH-HHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCC
Q 007987 170 GDIYETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGM 240 (582)
Q Consensus 170 ~~~~Eav~~ADIVILaVPd~a~-~~Vl~-eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngp 240 (582)
.++++++++||+|++++|.... ..++. +.++.||+|++|+.++ |-. +..++++.+ -...+||.--.|.-+
T Consensus 213 ~~l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i-~gA~LDVf~~EP~~~ 291 (364)
T 2j6i_A 213 ENIEELVAQADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQL-RGYGGDVWFPQPAPK 291 (364)
T ss_dssp SSHHHHHHTCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSE-EEEEESCCSSSSCCT
T ss_pred CCHHHHHhcCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCC-cEEEEecCCCCCCCC
Confidence 5899999999999999998644 34564 6788999999887554 421 233333322 123567777777544
Q ss_pred hhhHHHHHhhcccccCCCceEEEeecc-CCCHHHHH
Q 007987 241 GPSVRRLYVQGKEINGAGINSSFAVHQ-DVDGRATN 275 (582)
Q Consensus 241 g~~vR~ly~~G~e~~G~Gv~aliAv~q-d~tgeale 275 (582)
.+..+.+-.. .+-+.+++||- ..|.++.+
T Consensus 292 ~~pL~~~~~~------~~~nvilTPHia~~t~e~~~ 321 (364)
T 2j6i_A 292 DHPWRDMRNK------YGAGNAMTPHYSGTTLDAQT 321 (364)
T ss_dssp TCHHHHCCCT------TSCCEEECCSCGGGSHHHHH
T ss_pred CChHHhccCC------ccCcEEECCccCcCCHHHHH
Confidence 4443211000 01168889986 34555543
No 99
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.88 E-value=5.3e-08 Score=105.07 Aligned_cols=201 Identities=13% Similarity=0.136 Sum_probs=120.1
Q ss_pred CCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-------------------cC-ceecCCCc
Q 007987 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-------------------AG-FTEENGTL 169 (582)
Q Consensus 110 gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-------------------~G-~~~~d~t~ 169 (582)
|.-+|+|||+|.||.++|.+|.+. |++|++.+++..+ .+...+ .| +.. .
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~------G~~V~~~D~~~~k-v~~l~~g~~~~~epgl~~~~~~~~~~g~l~~----t 75 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDF------GHEVVCVDKDARK-IELLHQNVMPIYEPGLDALVASNVKAGRLSF----T 75 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCSTT-HHHHTTTCCSSCCTTHHHHHHHHHHTTCEEE----E
T ss_pred CceEEEEEcCCHHHHHHHHHHHHC------CCEEEEEeCCHHH-HHHHhcCCCCccCCCHHHHHHhhcccCCEEE----E
Confidence 336899999999999999999999 9998776665443 333222 12 232 4
Q ss_pred CCHHhhhccCCeEEEeccch-----------hHHHHHHHHHhcCCCCcEEEEecCchhh-------hhhcccccCCCCCc
Q 007987 170 GDIYETISGSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFPKNIG 231 (582)
Q Consensus 170 ~~~~Eav~~ADIVILaVPd~-----------a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~-------~~~~~~i~~p~dv~ 231 (582)
.++.+++++||+||+++|.. ...++++.|.+++++|++|++.+++... .+.+. ....+..
T Consensus 76 td~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~--~~~~d~~ 153 (446)
T 4a7p_A 76 TDLAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTGDEVERIIAEV--APNSGAK 153 (446)
T ss_dssp SCHHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHH--STTSCCE
T ss_pred CCHHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHh--CCCCCce
Confidence 67889999999999997644 3678889999999999999888766421 12111 1112443
Q ss_pred EEEeccCCC--hhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCc---cccccccccccccchhhh
Q 007987 232 VIAVCPKGM--GPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPF---TFATTLEQEYRSDIFGER 306 (582)
Q Consensus 232 VI~v~Pngp--g~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~---~iettf~~E~~sDlfgEq 306 (582)
+...|... |..+++.. . .+. +.+..+ +.++.+.+..++..++... ++-+. ....+.-.+.+.
T Consensus 154 -v~~~Pe~a~eG~a~~d~~-~--------p~~-ivvG~~-~~~~~~~~~~ly~~~~~~~~~~~~~~d-~~~aE~~Kl~~N 220 (446)
T 4a7p_A 154 -VVSNPEFLREGAAIEDFK-R--------PDR-VVVGTE-DEFARQVMREIYRPLSLNQSAPVLFTG-RRTSELIKYAAN 220 (446)
T ss_dssp -EEECCCCCCTTSHHHHHH-S--------CSC-EEEECS-CHHHHHHHHHHHCSCC-----CEEEEC-HHHHHHHHHHHH
T ss_pred -EEeCcccccccchhhhcc-C--------CCE-EEEeCC-cHHHHHHHHHHHHHHhcCCCeEEEeCC-HHHHHHHHHHHH
Confidence 44566432 22221111 1 123 222321 4678888999998877531 11111 111222222222
Q ss_pred hhhchHHHHHHHHHHHHHHcCCCHHHHHHH
Q 007987 307 ILLGAVHGIVESLFRRFTENGMNEDLAYKN 336 (582)
Q Consensus 307 vLsG~~pAlieAl~d~lVe~Gl~pe~Ay~~ 336 (582)
.+...-.+++..+...+.+.|+++++....
T Consensus 221 ~~~a~~ia~~nE~~~l~~~~GiD~~~v~~~ 250 (446)
T 4a7p_A 221 AFLAVKITFINEIADLCEQVGADVQEVSRG 250 (446)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 223333445677777778899998865553
No 100
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.88 E-value=8e-09 Score=106.00 Aligned_cols=94 Identities=17% Similarity=0.235 Sum_probs=74.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCC---------CcCCHHhhhccCCeE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG---------TLGDIYETISGSDLV 182 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~---------t~~~~~Eav~~ADIV 182 (582)
+||+|||+|+||.++|..|.++ |++|.+..|. +..+...+.|+..... ...+.++ ++.+|+|
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~------g~~V~~~~r~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~V 74 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALA------GEAINVLARG--ATLQALQTAGLRLTEDGATHTLPVRATHDAAA-LGEQDVV 74 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHT------TCCEEEECCH--HHHHHHHHTCEEEEETTEEEEECCEEESCHHH-HCCCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHHC------CCEEEEEECh--HHHHHHHHCCCEEecCCCeEEEeeeEECCHHH-cCCCCEE
Confidence 7899999999999999999998 8888777663 3456666778753100 0235555 5889999
Q ss_pred EEeccchhHHHHHHHHHhcCCCCcEE-EEecCc
Q 007987 183 LLLISDAAQADNYEKIFSCMKPNSIL-GLSHGF 214 (582)
Q Consensus 183 ILaVPd~a~~~Vl~eI~~~Lk~GaiL-~~a~G~ 214 (582)
|++||+....+++++|.++++++++| ++..|+
T Consensus 75 ilavk~~~~~~~~~~l~~~l~~~~~iv~~~nGi 107 (335)
T 3ghy_A 75 IVAVKAPALESVAAGIAPLIGPGTCVVVAMNGV 107 (335)
T ss_dssp EECCCHHHHHHHHGGGSSSCCTTCEEEECCSSS
T ss_pred EEeCCchhHHHHHHHHHhhCCCCCEEEEECCCC
Confidence 99999999999999999999999865 467785
No 101
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.86 E-value=3.3e-09 Score=109.61 Aligned_cols=95 Identities=18% Similarity=0.146 Sum_probs=75.5
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
...+.| ++|||||+|.||.++|+.|+.. |++|++.+++.. ..+.+.+.|+.. .+.+++++++|+|++
T Consensus 150 ~~~l~g-~~vgIIG~G~iG~~iA~~l~~~------G~~V~~~d~~~~-~~~~~~~~g~~~-----~~l~e~l~~aDvVi~ 216 (330)
T 2gcg_A 150 GYGLTQ-STVGIIGLGRIGQAIARRLKPF------GVQRFLYTGRQP-RPEEAAEFQAEF-----VSTPELAAQSDFIVV 216 (330)
T ss_dssp BCCCTT-CEEEEECCSHHHHHHHHHHGGG------TCCEEEEESSSC-CHHHHHTTTCEE-----CCHHHHHHHCSEEEE
T ss_pred CcCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCCc-chhHHHhcCcee-----CCHHHHHhhCCEEEE
Confidence 357899 9999999999999999999988 998877766533 345556667763 388899999999999
Q ss_pred eccchhH-HHHH-HHHHhcCCCCcEEEEec
Q 007987 185 LISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (582)
Q Consensus 185 aVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~ 212 (582)
++|+... ..++ +++.+.|++|++|+.++
T Consensus 217 ~vp~~~~t~~~i~~~~~~~mk~gailIn~s 246 (330)
T 2gcg_A 217 ACSLTPATEGLCNKDFFQKMKETAVFINIS 246 (330)
T ss_dssp CCCCCTTTTTCBSHHHHHHSCTTCEEEECS
T ss_pred eCCCChHHHHhhCHHHHhcCCCCcEEEECC
Confidence 9998754 4455 46778899999887554
No 102
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.86 E-value=1.7e-09 Score=112.25 Aligned_cols=92 Identities=18% Similarity=0.191 Sum_probs=73.9
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+.| ++|||||+|.||.++|+.|+.. |++|++.++...+ +.+.+.|+.. .+.++++++||+|+++
T Consensus 142 ~~l~g-~~vgIIG~G~iG~~vA~~l~~~------G~~V~~~d~~~~~--~~~~~~g~~~-----~~l~e~l~~aDiVil~ 207 (333)
T 2d0i_A 142 ESLYG-KKVGILGMGAIGKAIARRLIPF------GVKLYYWSRHRKV--NVEKELKARY-----MDIDELLEKSDIVILA 207 (333)
T ss_dssp CCSTT-CEEEEECCSHHHHHHHHHHGGG------TCEEEEECSSCCH--HHHHHHTEEE-----CCHHHHHHHCSEEEEC
T ss_pred CCCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcch--hhhhhcCcee-----cCHHHHHhhCCEEEEc
Confidence 57899 9999999999999999999988 9998776665433 5566678763 4788999999999999
Q ss_pred ccch-hHHHHHH-HHHhcCCCCcEEEEec
Q 007987 186 ISDA-AQADNYE-KIFSCMKPNSILGLSH 212 (582)
Q Consensus 186 VPd~-a~~~Vl~-eI~~~Lk~GaiL~~a~ 212 (582)
+|.. ....++. ++.+.|++| +|+.++
T Consensus 208 vp~~~~t~~~i~~~~~~~mk~g-ilin~s 235 (333)
T 2d0i_A 208 LPLTRDTYHIINEERVKKLEGK-YLVNIG 235 (333)
T ss_dssp CCCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred CCCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence 9987 4455664 577889999 887554
No 103
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.86 E-value=3.8e-09 Score=112.65 Aligned_cols=157 Identities=20% Similarity=0.154 Sum_probs=95.2
Q ss_pred eecccccccc-ccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCH
Q 007987 94 VRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (582)
Q Consensus 94 ~~~~r~~f~~-~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~ 172 (582)
+++|+|.... ....+.| |||||||+|+||..+|+.++.. |++|+++++..... ..++.. +.++
T Consensus 128 ~~~g~W~~~~~~~~el~g-ktlGiIGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~~-----~~~~~~----~~~l 191 (404)
T 1sc6_A 128 AHRGVGNKLAAGSFEARG-KKLGIIGYGHIGTQLGILAESL------GMYVYFYDIENKLP-----LGNATQ----VQHL 191 (404)
T ss_dssp HHHTCCC-----CCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCC-----CTTCEE----CSCH
T ss_pred HHcCCccccCCCccccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEEcCCchhc-----cCCcee----cCCH
Confidence 3455664321 2357899 9999999999999999999988 99987776643221 112432 4589
Q ss_pred HhhhccCCeEEEeccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCChhh
Q 007987 173 YETISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 173 ~Eav~~ADIVILaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
+|++++||+|++++|.... ..++ ++.+..||+|++|+.++ |-. ...++++.+ -...+||+..+|..+...
T Consensus 192 ~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i-~gA~lDVf~~EP~~~~~~ 270 (404)
T 1sc6_A 192 SDLLNMSDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHL-AGAAIDVFPTEPATNSDP 270 (404)
T ss_dssp HHHHHHCSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSE-EEEEEEC---------CT
T ss_pred HHHHhcCCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCc-cEEEEeecCCCCCCcccc
Confidence 9999999999999998754 4456 46778899999988665 321 223333222 113567888888543211
Q ss_pred H-HHHHhhcccccCCCceEEEeecc-CCCHHHHH
Q 007987 244 V-RRLYVQGKEINGAGINSSFAVHQ-DVDGRATN 275 (582)
Q Consensus 244 v-R~ly~~G~e~~G~Gv~aliAv~q-d~tgeale 275 (582)
. ..++. --+.+++||- ..|.++.+
T Consensus 271 ~~~pL~~--------~~nvilTPHi~~~T~ea~~ 296 (404)
T 1sc6_A 271 FTSPLAE--------FDNVLLTPHIGGSTQEAQE 296 (404)
T ss_dssp TTGGGTT--------CTTEEEECCCSCCSHHHHH
T ss_pred ccchhhc--------CCCEEECCCCCCCcHHHHH
Confidence 0 11222 2477889987 34555443
No 104
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.86 E-value=3.4e-09 Score=110.55 Aligned_cols=97 Identities=18% Similarity=0.156 Sum_probs=76.5
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHH-HhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLr-ds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
...+.| ++|||||+|.||.++|+.|+ .. |++|++.++.. ...+.+.+.|+.. +.+.++++++||+|+
T Consensus 158 ~~~l~g-~~vgIIG~G~IG~~vA~~l~~~~------G~~V~~~d~~~-~~~~~~~~~g~~~----~~~l~ell~~aDvVi 225 (348)
T 2w2k_A 158 AHNPRG-HVLGAVGLGAIQKEIARKAVHGL------GMKLVYYDVAP-ADAETEKALGAER----VDSLEELARRSDCVS 225 (348)
T ss_dssp CCCSTT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEECSSC-CCHHHHHHHTCEE----CSSHHHHHHHCSEEE
T ss_pred CcCCCC-CEEEEEEECHHHHHHHHHHHHhc------CCEEEEECCCC-cchhhHhhcCcEE----eCCHHHHhccCCEEE
Confidence 357899 99999999999999999999 77 99887666543 3345556668764 347889999999999
Q ss_pred EeccchhH-HHHH-HHHHhcCCCCcEEEEecC
Q 007987 184 LLISDAAQ-ADNY-EKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 184 LaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~G 213 (582)
+++|+... ..++ +++.+.|++|++|+.++.
T Consensus 226 l~vp~~~~t~~li~~~~l~~mk~gailin~sr 257 (348)
T 2w2k_A 226 VSVPYMKLTHHLIDEAFFAAMKPGSRIVNTAR 257 (348)
T ss_dssp ECCCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred EeCCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence 99998754 4555 467788999998886653
No 105
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.85 E-value=7.8e-08 Score=99.74 Aligned_cols=152 Identities=13% Similarity=0.139 Sum_probs=114.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcc----------cHHHHHHcCceecC----------CCcCC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR----------SFAEARAAGFTEEN----------GTLGD 171 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sk----------s~~~A~~~G~~~~d----------~t~~~ 171 (582)
.||+|||.|.||..+|..+..+ |++|++.+..... .++...+.|..... ..+.+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~------G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~ 80 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASG------GFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTN 80 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECC
T ss_pred CeEEEECCcHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccc
Confidence 7899999999999999999998 9999877654221 11222223322100 01457
Q ss_pred HHhhhccCCeEEEeccchhH--HHHHHHHHhcCCCCcEE-EEecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHH
Q 007987 172 IYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSIL-GLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (582)
Q Consensus 172 ~~Eav~~ADIVILaVPd~a~--~~Vl~eI~~~Lk~GaiL-~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly 248 (582)
++|++++||+||=++|-..- .++|.+|-++++++++| +-++++.+..+.+ .....-+|+..||=-|.+.
T Consensus 81 l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~---~~~~p~r~ig~HffNP~~~----- 152 (319)
T 3ado_A 81 LAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFT---GLAHVKQCIVAHPVNPPYY----- 152 (319)
T ss_dssp HHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHT---TCTTGGGEEEEEECSSTTT-----
T ss_pred hHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhh---hccCCCcEEEecCCCCccc-----
Confidence 78899999999999996655 46999999999999998 4778898887765 2333458999999888888
Q ss_pred hhcccccCCCceEE-EeeccCCCHHHHHHHHHHHHHhCCC
Q 007987 249 VQGKEINGAGINSS-FAVHQDVDGRATNVALGWSVALGSP 287 (582)
Q Consensus 249 ~~G~e~~G~Gv~al-iAv~qd~tgeale~alala~aiG~~ 287 (582)
++.+ +.++...+++.++.+.++++.+|..
T Consensus 153 ----------m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~ 182 (319)
T 3ado_A 153 ----------IPLVELVPHPETSPATVDRTHALMRKIGQS 182 (319)
T ss_dssp ----------CCEEEEEECTTCCHHHHHHHHHHHHHTTCE
T ss_pred ----------cchHHhcCCCCCcHHHHHHHHHHHHHhCCc
Confidence 3332 4557789999999999999999974
No 106
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.84 E-value=5.2e-08 Score=104.89 Aligned_cols=196 Identities=11% Similarity=0.081 Sum_probs=110.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH------------------cCceecCCCcCCHH
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA------------------AGFTEENGTLGDIY 173 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~------------------~G~~~~d~t~~~~~ 173 (582)
+||+|||+|.||.++|..|. . |++|++.+++ +...+...+ .++.. ..+++
T Consensus 37 mkIaVIGlG~mG~~lA~~La-~------G~~V~~~D~~-~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~----ttd~~ 104 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIA-Q------NHEVVALDIV-QAKVDMLNQKISPIVDKEIQEYLAEKPLNFRA----TTDKH 104 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSC-HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEE----ESCHH
T ss_pred CEEEEECcCHHHHHHHHHHH-c------CCeEEEEecC-HHHhhHHhccCCccccccHHHHHhhccCCeEE----EcCHH
Confidence 79999999999999999876 4 7888665554 333333322 12332 45788
Q ss_pred hhhccCCeEEEeccch-----------hHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccC--CC
Q 007987 174 ETISGSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPK--GM 240 (582)
Q Consensus 174 Eav~~ADIVILaVPd~-----------a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pn--gp 240 (582)
+++++||+||+++|.. ....+++.|.+ +++|++|++.+.+.....++-...+.+. . +...|- .|
T Consensus 105 ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~-~-v~~sPe~~~~ 181 (432)
T 3pid_A 105 DAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID-N-VIFSPEFLRE 181 (432)
T ss_dssp HHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC-C-EEECCCCCCT
T ss_pred HHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc-c-EeecCccCCc
Confidence 9999999999999976 45677888999 9999999888765432221100012221 3 344773 23
Q ss_pred hhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHH--hCCC-ccccccccccccccchhhhhhhchHHHHHH
Q 007987 241 GPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVA--LGSP-FTFATTLEQEYRSDIFGERILLGAVHGIVE 317 (582)
Q Consensus 241 g~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~a--iG~~-~~iettf~~E~~sDlfgEqvLsG~~pAlie 317 (582)
+..+.+... .+. |.+.. +.+..+.+..++.. ++.. .++.+.. .+-+.-.+-+..+...-.+++-
T Consensus 182 G~A~~~~l~---------p~r-IvvG~--~~~~~~~~~~ll~~~~~~~~~~v~~~~~-~~AE~~Kl~~N~~~a~~Ia~~n 248 (432)
T 3pid_A 182 GRALYDNLH---------PSR-IVIGE--RSARAERFADLLKEGAIKQDIPTLFTDS-TEAEAIKLFANTYLALRVAYFN 248 (432)
T ss_dssp TSHHHHHHS---------CSC-EEESS--CSHHHHHHHHHHHHHCSSSSCCEEECCH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhcccC---------Cce-EEecC--CHHHHHHHHHHHHhhhccCCCeEEecCc-cHHHHHHHHHHHHHHHHHHHHH
Confidence 443322221 122 23333 23556667777765 4432 1222221 1111111222222222333456
Q ss_pred HHHHHHHHcCCCHHHHHH
Q 007987 318 SLFRRFTENGMNEDLAYK 335 (582)
Q Consensus 318 Al~d~lVe~Gl~pe~Ay~ 335 (582)
.+...+.+.|+++++.+.
T Consensus 249 El~~lae~~GiD~~~v~~ 266 (432)
T 3pid_A 249 ELDSYAESQGLNSKQIIE 266 (432)
T ss_dssp HHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHH
Confidence 666666777888765443
No 107
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.81 E-value=1.4e-09 Score=112.40 Aligned_cols=146 Identities=14% Similarity=0.107 Sum_probs=97.9
Q ss_pred eccccccccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHh
Q 007987 95 RGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYE 174 (582)
Q Consensus 95 ~~~r~~f~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~E 174 (582)
++|+|... ....+.| ++|||||+|+||.++|+.|+.. |++|++.++...+. .++.. .....+++|
T Consensus 125 ~~g~W~~~-~~~~l~g-~tvGIiG~G~IG~~vA~~l~~~------G~~V~~~dr~~~~~------~~~~~-~~~~~~l~e 189 (315)
T 3pp8_A 125 NQALWKPL-PEYTREE-FSVGIMGAGVLGAKVAESLQAW------GFPLRCWSRSRKSW------PGVES-YVGREELRA 189 (315)
T ss_dssp HTTCCCCC-CCCCSTT-CCEEEECCSHHHHHHHHHHHTT------TCCEEEEESSCCCC------TTCEE-EESHHHHHH
T ss_pred HhcccCCC-CCCCcCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEcCCchhh------hhhhh-hcccCCHHH
Confidence 44566544 3477899 9999999999999999999987 99987776654321 23321 001246889
Q ss_pred hhccCCeEEEeccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCChhhHH
Q 007987 175 TISGSDLVLLLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVR 245 (582)
Q Consensus 175 av~~ADIVILaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR 245 (582)
++++||+|++++|.... ..++ ++.++.||+|++|+.++ |-. +..++++.+ ....+||.-..|.-+.+.
T Consensus 190 ll~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i-~gA~lDV~~~EPl~~~~p-- 266 (315)
T 3pp8_A 190 FLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKL-KGAMLDVFSQEPLPQESP-- 266 (315)
T ss_dssp HHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSE-EEEEESCCSSSSCCTTCG--
T ss_pred HHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCc-cEEEcCCCCCCCCCCCCh--
Confidence 99999999999996544 4566 47889999999998665 321 233333322 123567777777444433
Q ss_pred HHHhhcccccCCCceEEEeecc
Q 007987 246 RLYVQGKEINGAGINSSFAVHQ 267 (582)
Q Consensus 246 ~ly~~G~e~~G~Gv~aliAv~q 267 (582)
++.. -+.+++||-
T Consensus 267 -L~~~--------~nvilTPHi 279 (315)
T 3pp8_A 267 -LWRH--------PRVAMTPHI 279 (315)
T ss_dssp -GGGC--------TTEEECSSC
T ss_pred -hhcC--------CCEEECCCC
Confidence 2322 467789886
No 108
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.81 E-value=1.6e-08 Score=103.00 Aligned_cols=96 Identities=20% Similarity=0.208 Sum_probs=74.3
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc-CceecC----------CCcCCHHhhhccCC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEEN----------GTLGDIYETISGSD 180 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~-G~~~~d----------~t~~~~~Eav~~AD 180 (582)
+||+|||+|.||..+|..|.+. |++|.+.+++. +..+...+. |+...+ ....+.+++++++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~------g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 77 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK------GQSVLAWDIDA-QRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDAD 77 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCH-HHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCS
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH-HHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCC
Confidence 7899999999999999999998 88887665543 334444444 432100 01457888889999
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
+||+++|+..+.++++++.++++++++|+...|+
T Consensus 78 ~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~~~~ 111 (359)
T 1bg6_A 78 VILIVVPAIHHASIAANIASYISEGQLIILNPGA 111 (359)
T ss_dssp EEEECSCGGGHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred EEEEeCCchHHHHHHHHHHHhCCCCCEEEEcCCC
Confidence 9999999999999999999999999987776773
No 109
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.80 E-value=1.6e-09 Score=112.60 Aligned_cols=147 Identities=18% Similarity=0.152 Sum_probs=98.2
Q ss_pred eeccccccccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHH
Q 007987 94 VRGGRDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY 173 (582)
Q Consensus 94 ~~~~r~~f~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~ 173 (582)
++.|+|... ....+.| +||||||+|+||.++|+.|+.. |++|+++++..... ..+ .+.. ...+++
T Consensus 125 ~~~g~W~~~-~~~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~dr~~~~~-~~~--~~~~----~~~~l~ 189 (324)
T 3hg7_A 125 QKQRLWQSH-PYQGLKG-RTLLILGTGSIGQHIAHTGKHF------GMKVLGVSRSGRER-AGF--DQVY----QLPALN 189 (324)
T ss_dssp HHTTCCCCC-CCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCC-TTC--SEEE----CGGGHH
T ss_pred HhhCCCcCC-CCccccc-ceEEEEEECHHHHHHHHHHHhC------CCEEEEEcCChHHh-hhh--hccc----ccCCHH
Confidence 345667543 3467999 9999999999999999999988 99987766653221 111 1111 145789
Q ss_pred hhhccCCeEEEeccchhH-HHHHH-HHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCChhhH
Q 007987 174 ETISGSDLVLLLISDAAQ-ADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (582)
Q Consensus 174 Eav~~ADIVILaVPd~a~-~~Vl~-eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg~~v 244 (582)
|++++||+|++++|.... ..++. +.+..||+|++|+.++ |-. +..++++.+ -...+||.-..|.-+.+.
T Consensus 190 ell~~aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i-~ga~lDV~~~EPl~~~~p- 267 (324)
T 3hg7_A 190 KMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKL-GMAVLDVFEQEPLPADSP- 267 (324)
T ss_dssp HHHHTCSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSS-SEEEESCCSSSSCCTTCT-
T ss_pred HHHhhCCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCc-eEEEeccCCCCCCCCCCh-
Confidence 999999999999996544 34554 6788899999998775 322 223333322 223567777777544433
Q ss_pred HHHHhhcccccCCCceEEEeecc
Q 007987 245 RRLYVQGKEINGAGINSSFAVHQ 267 (582)
Q Consensus 245 R~ly~~G~e~~G~Gv~aliAv~q 267 (582)
++. --+.+++||-
T Consensus 268 --L~~--------~~nvilTPHi 280 (324)
T 3hg7_A 268 --LWG--------QPNLIITPHN 280 (324)
T ss_dssp --TTT--------CTTEEECCSC
T ss_pred --hhc--------CCCEEEeCCC
Confidence 222 2467889886
No 110
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.79 E-value=6.9e-08 Score=104.74 Aligned_cols=196 Identities=14% Similarity=0.097 Sum_probs=116.9
Q ss_pred CCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcC--------------------ceecCCCc
Q 007987 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG--------------------FTEENGTL 169 (582)
Q Consensus 110 gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G--------------------~~~~d~t~ 169 (582)
|.+||+|||+|.||.++|..|.+. |++|++.+++ ++..+...+.+ +.. .
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~------G~~V~~~d~~-~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~----t 75 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI------GHDVFCLDVD-QAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRF----S 75 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----E
T ss_pred CCceEEEECcCHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEE----E
Confidence 458999999999999999999998 9998665554 33344333321 121 3
Q ss_pred CCHHhhhccCCeEEEeccc----------hhHHHHHHHHHhcCCCCcEEEEecCchhh-------hhhcccccCC---CC
Q 007987 170 GDIYETISGSDLVLLLISD----------AAQADNYEKIFSCMKPNSILGLSHGFLLG-------HLQSMGLDFP---KN 229 (582)
Q Consensus 170 ~~~~Eav~~ADIVILaVPd----------~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~-------~~~~~~i~~p---~d 229 (582)
.++++++++||+||++||. ....+++++|.++++++++|+..+++... .+.+. +..+ .+
T Consensus 76 td~~~a~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~-~~~g~~~~~ 154 (478)
T 2y0c_A 76 TDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEE-LAKRGGDQM 154 (478)
T ss_dssp CCHHHHHHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHH-HHHTTCCCC
T ss_pred CCHHHHhhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHH-hcCCCCCcc
Confidence 4677889999999999997 78888999999999999998877775321 11110 0001 12
Q ss_pred CcEEEeccCC--ChhhHHHHHhhcccccCCCceEEEeeccCCCH----HHHHHHHHHHHHhCC--Ccccccccccccccc
Q 007987 230 IGVIAVCPKG--MGPSVRRLYVQGKEINGAGINSSFAVHQDVDG----RATNVALGWSVALGS--PFTFATTLEQEYRSD 301 (582)
Q Consensus 230 v~VI~v~Png--pg~~vR~ly~~G~e~~G~Gv~aliAv~qd~tg----eale~alala~aiG~--~~~iettf~~E~~sD 301 (582)
.. +...|.. ||..+.+... .+. +.+..+ ++ +..+.+..++..++. ..++.+.. ...+.-
T Consensus 155 ~~-v~~~Pe~~~eG~~~~~~~~---------p~~-iviG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di-~~ae~~ 221 (478)
T 2y0c_A 155 FS-VVSNPEFLKEGAAVDDFTR---------PDR-IVIGCD-DDVPGERARELMKKLYAPFNRNHERTLYMDV-RSAEFT 221 (478)
T ss_dssp EE-EEECCCCCCTTCHHHHHHS---------CSC-EEEECC-SSHHHHHHHHHHHHHTGGGGSSSCCEEEECH-HHHHHH
T ss_pred EE-EEEChhhhcccceeeccCC---------CCE-EEEEEC-CCcccHHHHHHHHHHHHHHhccCCeEEcCCH-HHHHHH
Confidence 22 4455532 3333221111 222 222322 23 677888888887663 11111111 111111
Q ss_pred chhhhhhhchHH----HHHHHHHHHHHHcCCCHHHHH
Q 007987 302 IFGERILLGAVH----GIVESLFRRFTENGMNEDLAY 334 (582)
Q Consensus 302 lfgEqvLsG~~p----AlieAl~d~lVe~Gl~pe~Ay 334 (582)
. .+.++.- +++..+...+.+.|+++++..
T Consensus 222 K----l~~N~~~a~~ia~~nE~~~la~~~Gid~~~v~ 254 (478)
T 2y0c_A 222 K----YAANAMLATRISFMNELANLADRFGADIEAVR 254 (478)
T ss_dssp H----HHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHH
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH
Confidence 1 3334443 456777777888999986544
No 111
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.76 E-value=1.2e-08 Score=105.96 Aligned_cols=147 Identities=14% Similarity=0.066 Sum_probs=95.9
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
...+.| ++|||||+|.||.++|+.|+.. |++|++.++...+. +.+ ++.. ..+.++++++||+|++
T Consensus 141 ~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~~~-~~~~----~~~l~ell~~aDvV~l 205 (333)
T 1j4a_A 141 GREVRD-QVVGVVGTGHIGQVFMQIMEGF------GAKVITYDIFRNPE---LEK-KGYY----VDSLDDLYKQADVISL 205 (333)
T ss_dssp BCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCHH---HHH-TTCB----CSCHHHHHHHCSEEEE
T ss_pred cccCCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEECCCcchh---HHh-hCee----cCCHHHHHhhCCEEEE
Confidence 467899 9999999999999999999988 99987766654332 222 3332 3478999999999999
Q ss_pred eccchhH-HHHHH-HHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCC--Ch--------hhHH
Q 007987 185 LISDAAQ-ADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKG--MG--------PSVR 245 (582)
Q Consensus 185 aVPd~a~-~~Vl~-eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Png--pg--------~~vR 245 (582)
++|.... ..++. +..+.||+|++|+.++ |-. ...++++.+ -...+||+--.|.. +. +...
T Consensus 206 ~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i-~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~ 284 (333)
T 1j4a_A 206 HVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKI-FGYAMDVYEGEVGIFNEDWEGKEFPDARLA 284 (333)
T ss_dssp CSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSE-EEEEESCCTTCTTTTTSBCTTSCCSCHHHH
T ss_pred cCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCc-eEEEEecCCCCCCccccccccccCCccchh
Confidence 9997654 44553 5778899999887554 421 223333222 12356777666631 11 1112
Q ss_pred HHHhhcccccCCCceEEEeecc-CCCHHHHH
Q 007987 246 RLYVQGKEINGAGINSSFAVHQ-DVDGRATN 275 (582)
Q Consensus 246 ~ly~~G~e~~G~Gv~aliAv~q-d~tgeale 275 (582)
.++.. -+.+++||- ..|.++.+
T Consensus 285 ~L~~~--------~nvilTPHia~~t~~~~~ 307 (333)
T 1j4a_A 285 DLIAR--------PNVLVTPKTAFYTTHAVR 307 (333)
T ss_dssp HHHHC--------TTEEECSSCTTCBHHHHH
T ss_pred hHHhC--------CCEEECCccccCHHHHHH
Confidence 34443 367789987 34555443
No 112
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=98.74 E-value=1.1e-08 Score=107.08 Aligned_cols=148 Identities=18% Similarity=0.080 Sum_probs=98.2
Q ss_pred ccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 007987 104 LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 104 ~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
....+.| ++|||||+|.||.++|+.|+.. |++|++.++...+ ..+.++. ..++++++++||+|+
T Consensus 142 ~~~~l~g-ktvgIiGlG~IG~~vA~~l~~~------G~~V~~~d~~~~~----~~~~~~~-----~~~l~ell~~aDvV~ 205 (343)
T 2yq5_A 142 ISNEIYN-LTVGLIGVGHIGSAVAEIFSAM------GAKVIAYDVAYNP----EFEPFLT-----YTDFDTVLKEADIVS 205 (343)
T ss_dssp CBCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCG----GGTTTCE-----ECCHHHHHHHCSEEE
T ss_pred CccccCC-CeEEEEecCHHHHHHHHHHhhC------CCEEEEECCChhh----hhhcccc-----ccCHHHHHhcCCEEE
Confidence 3567899 9999999999999999999988 9998776665432 1223444 358999999999999
Q ss_pred EeccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCC-Chh--------h-H
Q 007987 184 LLISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKG-MGP--------S-V 244 (582)
Q Consensus 184 LaVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Png-pg~--------~-v 244 (582)
+++|.... ..++ .+.+..||+|++|+.++ |-. +..++++.+ ....+||.--.|.. |.. . .
T Consensus 206 l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i-~gA~LDV~~~EP~~~~~~~~~~~~l~~~~ 284 (343)
T 2yq5_A 206 LHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEI-AGAGLDTLAGESSYFGHTGLTDSEIPEDY 284 (343)
T ss_dssp ECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSS-SCEEESCCTTGGGTTTCCSCCTTTSCHHH
T ss_pred EcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCC-cEEEecccccCCCccccccccccccccch
Confidence 99996544 3455 36788899999998765 321 233333222 23466777666621 110 0 1
Q ss_pred HHHHhhcccccCCCceEEEeecc-CCCHHHHHH
Q 007987 245 RRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (582)
Q Consensus 245 R~ly~~G~e~~G~Gv~aliAv~q-d~tgeale~ 276 (582)
..++.. -+.+++||- ..|.++.+.
T Consensus 285 ~pL~~~--------~nvilTPHia~~t~ea~~~ 309 (343)
T 2yq5_A 285 KTLAKM--------PNVVITPHSAFYTETSIRN 309 (343)
T ss_dssp HHHTTC--------TTEEECSSCTTCBHHHHHH
T ss_pred hHHhcC--------CCEEECCccccchHHHHHH
Confidence 123332 577889986 455555443
No 113
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.72 E-value=1.6e-08 Score=108.39 Aligned_cols=158 Identities=18% Similarity=0.141 Sum_probs=100.4
Q ss_pred eecccccccc-ccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCH
Q 007987 94 VRGGRDLFNL-LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI 172 (582)
Q Consensus 94 ~~~~r~~f~~-~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~ 172 (582)
+++|+|.... ....+.| |+|||||+|+||.++|+.++.. |++|+++++..... ..+... +.++
T Consensus 139 ~~~g~W~~~~~~~~el~g-ktvGIIGlG~IG~~vA~~l~~~------G~~V~~yd~~~~~~-----~~~~~~----~~sl 202 (416)
T 3k5p_A 139 AHAGGWEKTAIGSREVRG-KTLGIVGYGNIGSQVGNLAESL------GMTVRYYDTSDKLQ-----YGNVKP----AASL 202 (416)
T ss_dssp HHTTCCCCCCTTCCCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECTTCCCC-----BTTBEE----CSSH
T ss_pred hhcccccccCCCCccCCC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCcchhc-----ccCcEe----cCCH
Confidence 3456665432 2467899 9999999999999999999988 99987766542211 123332 5689
Q ss_pred HhhhccCCeEEEeccchhHH-HHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCChhh
Q 007987 173 YETISGSDLVLLLISDAAQA-DNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 173 ~Eav~~ADIVILaVPd~a~~-~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
+|++++||+|++++|..... .++ ++.+..||+|++|+.++ |-. +..++++.+ ....+||.-..|..+...
T Consensus 203 ~ell~~aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i-~gAalDVf~~EP~~~~~~ 281 (416)
T 3k5p_A 203 DELLKTSDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHL-AGAAIDVFPVEPASNGER 281 (416)
T ss_dssp HHHHHHCSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSE-EEEEECCCSSCCSSTTSC
T ss_pred HHHHhhCCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCc-cEEEeCCCCCCCCCcccc
Confidence 99999999999999986654 355 46788899999988664 432 223333222 123566666667544311
Q ss_pred H-HHHHhhcccccCCCceEEEeecc-CCCHHHHHH
Q 007987 244 V-RRLYVQGKEINGAGINSSFAVHQ-DVDGRATNV 276 (582)
Q Consensus 244 v-R~ly~~G~e~~G~Gv~aliAv~q-d~tgeale~ 276 (582)
. ..++. --+.+++||- ..|.++.+.
T Consensus 282 ~~~pL~~--------~~nvilTPHig~~T~ea~~~ 308 (416)
T 3k5p_A 282 FSTPLQG--------LENVILTPHIGGSTEEAQER 308 (416)
T ss_dssp CCCTTTT--------CTTEEECCSCTTCCHHHHHH
T ss_pred cchhHhc--------CCCEEECCCCCCCCHHHHHH
Confidence 0 00111 1467889994 566665543
No 114
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=98.71 E-value=1.3e-08 Score=105.49 Aligned_cols=116 Identities=18% Similarity=0.125 Sum_probs=82.4
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
...+.| ++|||||+|.||.++|+.|+.. |++|++.++...+. + +.++. ..+.++++++||+|++
T Consensus 141 ~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~~-----~~~l~ell~~aDvV~~ 204 (331)
T 1xdw_A 141 SKEVRN-CTVGVVGLGRIGRVAAQIFHGM------GATVIGEDVFEIKG---I-EDYCT-----QVSLDEVLEKSDIITI 204 (331)
T ss_dssp CCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCCS---C-TTTCE-----ECCHHHHHHHCSEEEE
T ss_pred ccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCccHH---H-Hhccc-----cCCHHHHHhhCCEEEE
Confidence 467899 9999999999999999999988 99987776654332 1 12333 3588999999999999
Q ss_pred eccchhH-HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEecc
Q 007987 185 LISDAAQ-ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCP 237 (582)
Q Consensus 185 aVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~P 237 (582)
++|.... ..++ ++..+.||+|++|+.++ |-. ...++++.+ -...+||.-..|
T Consensus 205 ~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i-~gA~LDV~~~EP 265 (331)
T 1xdw_A 205 HAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKL-GGYGCDVLDGEA 265 (331)
T ss_dssp CCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSE-EEEEESCCTTGG
T ss_pred ecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCc-eEEEEecCCCCC
Confidence 9997643 3455 46778899999988664 321 223333222 123567776666
No 115
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=98.70 E-value=1.3e-08 Score=105.68 Aligned_cols=92 Identities=18% Similarity=0.222 Sum_probs=72.0
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
...+.| ++|||||+|.||.++|+.|+.. |++|++.++...+. + +.++. ..+.++++++||+|++
T Consensus 140 ~~~l~g-~~vgIiG~G~IG~~~A~~l~~~------G~~V~~~d~~~~~~---~-~~~~~-----~~~l~ell~~aDvV~~ 203 (333)
T 1dxy_A 140 GKELGQ-QTVGVMGTGHIGQVAIKLFKGF------GAKVIAYDPYPMKG---D-HPDFD-----YVSLEDLFKQSDVIDL 203 (333)
T ss_dssp CCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCCSS---C-CTTCE-----ECCHHHHHHHCSEEEE
T ss_pred ccCCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEECCCcchh---h-Hhccc-----cCCHHHHHhcCCEEEE
Confidence 467899 9999999999999999999988 99987776654332 1 12333 3588999999999999
Q ss_pred eccchhH-HHHH-HHHHhcCCCCcEEEEec
Q 007987 185 LISDAAQ-ADNY-EKIFSCMKPNSILGLSH 212 (582)
Q Consensus 185 aVPd~a~-~~Vl-~eI~~~Lk~GaiL~~a~ 212 (582)
++|.... ..++ ++..+.||+|++|+.++
T Consensus 204 ~~P~~~~t~~li~~~~l~~mk~ga~lIn~s 233 (333)
T 1dxy_A 204 HVPGIEQNTHIINEAAFNLMKPGAIVINTA 233 (333)
T ss_dssp CCCCCGGGTTSBCHHHHHHSCTTEEEEECS
T ss_pred cCCCchhHHHHhCHHHHhhCCCCcEEEECC
Confidence 9997664 3455 46778899999988664
No 116
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.69 E-value=3.7e-07 Score=96.62 Aligned_cols=92 Identities=13% Similarity=0.051 Sum_probs=66.0
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec------------C--CCcCCHHhhhc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE------------N--GTLGDIYETIS 177 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~------------d--~t~~~~~Eav~ 177 (582)
+||+|||+|.||.++|..|.+ |++|++.+++ ....+...+.|.... . ....+..++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-------G~~V~~~d~~-~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~ 72 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-------QNEVTIVDIL-PSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYK 72 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEECSC-HHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-------CCEEEEEECC-HHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhc
Confidence 589999999999999999863 6777655544 333444444343100 0 01346778889
Q ss_pred cCCeEEEeccch-----------hHHHHHHHHHhcCCCCcEEEEec
Q 007987 178 GSDLVLLLISDA-----------AQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 178 ~ADIVILaVPd~-----------a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
++|+||+++|+. ...+++++|.+ ++++++|++.+
T Consensus 73 ~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~S 117 (402)
T 1dlj_A 73 EAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKS 117 (402)
T ss_dssp HCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECS
T ss_pred CCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeC
Confidence 999999999987 47788889999 99999887743
No 117
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.68 E-value=2.1e-08 Score=102.13 Aligned_cols=119 Identities=20% Similarity=0.131 Sum_probs=82.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecC-CC-----cCCHHhhhccCCeEEEe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-GT-----LGDIYETISGSDLVLLL 185 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d-~t-----~~~~~Eav~~ADIVILa 185 (582)
+||+|||+|+||.++|..|. + |.+|.+..|.. ...+..++.|+.... +. .....+++..+|+||++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~------g~~V~~~~r~~-~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vila 74 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-L------YHDVTVVTRRQ-EQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVT 74 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-T------TSEEEEECSCH-HHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHh-c------CCceEEEECCH-HHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEE
Confidence 79999999999999999999 8 88887766643 334455567876410 00 00013456789999999
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEEEecCchhh-hhhcccccCCCCCcEEEec------cCCChhh
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILGLSHGFLLG-HLQSMGLDFPKNIGVIAVC------PKGMGPS 243 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~-~~~~~~i~~p~dv~VI~v~------Pngpg~~ 243 (582)
||+....++++++.+. .++++|++..|+... .+.+ .+|.+ +|+... ..+|+++
T Consensus 75 vK~~~~~~~l~~l~~~-~~~~ivs~~nGi~~~e~l~~---~~~~~-~vl~g~~~~~a~~~~pg~v 134 (307)
T 3ego_A 75 VKQHQLQSVFSSLERI-GKTNILFLQNGMGHIHDLKD---WHVGH-SIYVGIVEHGAVRKSDTAV 134 (307)
T ss_dssp CCGGGHHHHHHHTTSS-CCCEEEECCSSSHHHHHHHT---CCCSC-EEEEEEECCEEEECSSSEE
T ss_pred eCHHHHHHHHHHhhcC-CCCeEEEecCCccHHHHHHH---hCCCC-cEEEEEEeeceEECCCCEE
Confidence 9999999999999875 566667788999864 4544 34443 444333 3456665
No 118
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.65 E-value=1e-06 Score=95.92 Aligned_cols=202 Identities=19% Similarity=0.156 Sum_probs=117.8
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcc---cHHHHHH---------------------cCceec
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSR---SFAEARA---------------------AGFTEE 165 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sk---s~~~A~~---------------------~G~~~~ 165 (582)
++||+|||+|.||.++|..|.+. .|+ +|++.+++..+ ..+...+ .|-..
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~-----~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~- 91 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADA-----PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFE- 91 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHS-----TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEE-
T ss_pred CCEEEEECcCHHHHHHHHHHHHh-----CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeE-
Confidence 48999999999999999999865 167 88776665441 1222111 12111
Q ss_pred CCCcCCHHhhhccCCeEEEeccchh------------HHHHHHHHHhcCCCCcEEEEecCchhhh--------h-hcccc
Q 007987 166 NGTLGDIYETISGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLGH--------L-QSMGL 224 (582)
Q Consensus 166 d~t~~~~~Eav~~ADIVILaVPd~a------------~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~--------~-~~~~i 224 (582)
+.+..+++++||+||+++|... ...+.+.|.+++++|++|++.+++.... + +..+.
T Consensus 92 ---~ttd~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~ 168 (478)
T 3g79_A 92 ---CTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGL 168 (478)
T ss_dssp ---EESCGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCC
T ss_pred ---EeCcHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCC
Confidence 2233678999999999998653 3455678999999999998887664221 1 11111
Q ss_pred cCCCCCcEEEeccC--CChhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHh-CCCcccccccccccccc
Q 007987 225 DFPKNIGVIAVCPK--GMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL-GSPFTFATTLEQEYRSD 301 (582)
Q Consensus 225 ~~p~dv~VI~v~Pn--gpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~ai-G~~~~iettf~~E~~sD 301 (582)
....++ .+.-.|. .||..+.+... .+.++ ... +.+..+.+..++..+ +...++-+.. ..-+.-
T Consensus 169 ~~~~d~-~v~~~Pe~~~~G~a~~~~~~---------~~~Iv-~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~-~~aE~~ 234 (478)
T 3g79_A 169 KAGEDF-ALAHAPERVMVGRLLKNIRE---------HDRIV-GGI--DEASTKRAVELYSPVLTVGQVIPMSA-TAAEVT 234 (478)
T ss_dssp CBTTTB-EEEECCCCCCTTSHHHHHHH---------SCEEE-EES--SHHHHHHHHHHHGGGCSSCCEEEEEH-HHHHHH
T ss_pred CcCCce-eEEeCCccCCccchhhhhcC---------CcEEE-EeC--CHHHHHHHHHHHhhhccCCeEEeCCH-HHHHHH
Confidence 111233 3456773 45554332222 23333 233 567789999999999 6542222221 111111
Q ss_pred chhhhhhhchHHHHHHHHHHHHHHcCCCHHHHHH
Q 007987 302 IFGERILLGAVHGIVESLFRRFTENGMNEDLAYK 335 (582)
Q Consensus 302 lfgEqvLsG~~pAlieAl~d~lVe~Gl~pe~Ay~ 335 (582)
.+-++.+...--+++-.+...+-+.|+++++...
T Consensus 235 Kl~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~ 268 (478)
T 3g79_A 235 KTAENTFRDLQIAAINQLALYCEAMGINVYDVRT 268 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 1222222233334566667777788999886655
No 119
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.62 E-value=4.5e-08 Score=102.52 Aligned_cols=94 Identities=18% Similarity=0.231 Sum_probs=69.6
Q ss_pred CEEEEEccchhHHHHHHHHHH-hhhhhcCCceEEEEec--CCcccHHHH-HHcCcee----cCC-----------CcCCH
Q 007987 112 NQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGLR--KGSRSFAEA-RAAGFTE----ENG-----------TLGDI 172 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrd-s~~~~g~G~~ViVg~r--~~sks~~~A-~~~G~~~----~d~-----------t~~~~ 172 (582)
+||+|||+|+||.++|..|.. + |++|.+..+ .+.+..+.+ .+.|+.. .++ ...++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~------G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRD------GVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDP 76 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTST------TEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCH
T ss_pred ceEEEECCCHHHHHHHHHHHhCC------CCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCH
Confidence 689999999999999999976 6 888877651 212333432 2333110 001 13467
Q ss_pred HhhhccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 173 YETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 173 ~Eav~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+++++++|+||++||.....+++++|.++++++++|+..
T Consensus 77 ~~a~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 77 EIAISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVGL 115 (404)
T ss_dssp HHHHTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEET
T ss_pred HHHhCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEEc
Confidence 888999999999999999999999999999999887663
No 120
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.61 E-value=7.2e-08 Score=88.16 Aligned_cols=113 Identities=7% Similarity=-0.049 Sum_probs=80.5
Q ss_pred ccCCCEEEEEcc----chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 007987 108 FNGINQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 108 l~gikkIgIIG~----GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
++- ++|+|||+ |+||..++++|++. |++|+..+++..+ -.|... ..+++|+.+..|+++
T Consensus 12 ~~p-~~IavIGaS~~~g~~G~~~~~~L~~~------G~~V~~vnp~~~~------i~G~~~----~~s~~el~~~vDlvi 74 (138)
T 1y81_A 12 KEF-RKIALVGASKNPAKYGNIILKDLLSK------GFEVLPVNPNYDE------IEGLKC----YRSVRELPKDVDVIV 74 (138)
T ss_dssp --C-CEEEEETCCSCTTSHHHHHHHHHHHT------TCEEEEECTTCSE------ETTEEC----BSSGGGSCTTCCEEE
T ss_pred cCC-CeEEEEeecCCCCCHHHHHHHHHHHC------CCEEEEeCCCCCe------ECCeee----cCCHHHhCCCCCEEE
Confidence 344 89999999 99999999999998 9885443333211 157764 568899888999999
Q ss_pred EeccchhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhh
Q 007987 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 184 LaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
+++|++...++++++.. ...+.+|.+++++.-...+. .-..++.+| -||+++-.
T Consensus 75 i~vp~~~v~~v~~~~~~-~g~~~i~~~~~~~~~~l~~~---a~~~Gi~~i--gpnc~g~~ 128 (138)
T 1y81_A 75 FVVPPKVGLQVAKEAVE-AGFKKLWFQPGAESEEIRRF---LEKAGVEYS--FGRCIMVE 128 (138)
T ss_dssp ECSCHHHHHHHHHHHHH-TTCCEEEECTTSCCHHHHHH---HHHHTCEEE--CSCCHHHH
T ss_pred EEeCHHHHHHHHHHHHH-cCCCEEEEcCccHHHHHHHH---HHHCCCEEE--cCCcceEE
Confidence 99999999999988765 45566777777664322211 111355554 59998876
No 121
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.59 E-value=1.5e-06 Score=93.46 Aligned_cols=202 Identities=11% Similarity=0.099 Sum_probs=116.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhh-------------
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYET------------- 175 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Ea------------- 175 (582)
.| .|+.|||+|.||.++|.+|.+. |++|++.+++..+ .+... .|...- .-...+|+
T Consensus 10 ~~-~~~~ViGlGyvGlp~A~~La~~------G~~V~~~D~~~~k-v~~L~-~g~~pi--~epgl~~ll~~~~~~g~l~~t 78 (431)
T 3ojo_A 10 HG-SKLTVVGLGYIGLPTSIMFAKH------GVDVLGVDINQQT-IDKLQ-NGQISI--EEPGLQEVYEEVLSSGKLKVS 78 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHHHT------TCEEEEECSCHHH-HHHHH-TTCCSS--CCTTHHHHHHHHHHTTCEEEE
T ss_pred cC-CccEEEeeCHHHHHHHHHHHHC------CCEEEEEECCHHH-HHHHH-CCCCCc--CCCCHHHHHHhhcccCceEEe
Confidence 46 8999999999999999999999 9998766554332 33322 332110 00011111
Q ss_pred --hccCCeEEEeccchh------------HHHHHHHHHhcCCCCcEEEEecCchhhhh--------hcccccCCCCCcEE
Q 007987 176 --ISGSDLVLLLISDAA------------QADNYEKIFSCMKPNSILGLSHGFLLGHL--------QSMGLDFPKNIGVI 233 (582)
Q Consensus 176 --v~~ADIVILaVPd~a------------~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~--------~~~~i~~p~dv~VI 233 (582)
+++||+||++||... ...+.+.|.+++++|++|++.+++..... ++.+.....++ .+
T Consensus 79 td~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~-~v 157 (431)
T 3ojo_A 79 TTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDI-YL 157 (431)
T ss_dssp SSCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTE-EE
T ss_pred CchhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCe-EE
Confidence 457999999999765 34556789999999999988876642211 11111112233 34
Q ss_pred Eecc--CCChhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhch
Q 007987 234 AVCP--KGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGA 311 (582)
Q Consensus 234 ~v~P--ngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~ 311 (582)
.-.| -.||..+.+... .+.++ ... +.++.+.+..++..++...++.+.. ..-+.-.+-++.+...
T Consensus 158 ~~~Pe~~~~G~A~~~~~~---------p~~Iv-~G~--~~~~~~~~~~ly~~~~~~~~~~~~~-~~AE~~Kl~~N~~~a~ 224 (431)
T 3ojo_A 158 VHCPERVLPGKILEELVH---------NNRII-GGV--TKACIEAGKRVYRTFVQGEMIETDA-RTAEMSKLMENTYRDV 224 (431)
T ss_dssp EECCCCCCTTSHHHHHHH---------SCEEE-EES--SHHHHHHHHHHHTTTCCSCEEEEEH-HHHHHHHHHHHHHHHH
T ss_pred EECCCcCCCcchhhcccC---------CCEEE-EeC--CHHHHHHHHHHHHHHhCCcEEeCCH-HHHHHHHHHHHHHHHH
Confidence 5677 334554332221 23433 333 5789999999999998742222221 1111112222222222
Q ss_pred HHHHHHHHHHHHHHcCCCHHHHHH
Q 007987 312 VHGIVESLFRRFTENGMNEDLAYK 335 (582)
Q Consensus 312 ~pAlieAl~d~lVe~Gl~pe~Ay~ 335 (582)
--+++-.+...+-+.|++.++..+
T Consensus 225 ~Ia~~nE~~~l~e~~GiD~~~v~~ 248 (431)
T 3ojo_A 225 NIALANELTKICNNLNINVLDVIE 248 (431)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHH
Confidence 333566666777788888875544
No 122
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=98.55 E-value=2.6e-08 Score=105.66 Aligned_cols=138 Identities=16% Similarity=0.117 Sum_probs=92.9
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+.| ++|||||+|+||.++|+.|+.. |++|++.++. .. ....|.. ..++++++++||+|+++
T Consensus 112 ~~l~g-~tvGIIGlG~IG~~vA~~l~~~------G~~V~~~d~~----~~-~~~~g~~-----~~~l~ell~~aDvV~l~ 174 (380)
T 2o4c_A 112 ADLAE-RTYGVVGAGQVGGRLVEVLRGL------GWKVLVCDPP----RQ-AREPDGE-----FVSLERLLAEADVISLH 174 (380)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHH----HH-HHSTTSC-----CCCHHHHHHHCSEEEEC
T ss_pred cccCC-CEEEEEeCCHHHHHHHHHHHHC------CCEEEEEcCC----hh-hhccCcc-----cCCHHHHHHhCCEEEEe
Confidence 46889 9999999999999999999988 9998765542 11 1123433 46899999999999999
Q ss_pred ccchhH-----HHHHH-HHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcc
Q 007987 186 ISDAAQ-----ADNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK 252 (582)
Q Consensus 186 VPd~a~-----~~Vl~-eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~ 252 (582)
+|.... ..++. ++.+.||+|++|+.++ |-. +..++++.+ ....+||.-..|. |... ++.
T Consensus 175 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i-~~A~LDV~~~EP~-~~~~---l~~--- 246 (380)
T 2o4c_A 175 TPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGAD-LEVALDVWEGEPQ-ADPE---LAA--- 246 (380)
T ss_dssp CCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCC-EEEEESCCTTTTS-CCHH---HHT---
T ss_pred ccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCC-ceEEeeeeccCCC-Cchh---hcc---
Confidence 997664 34553 6888999999988664 422 222333222 2345677777773 3222 331
Q ss_pred cccCCCceEEEeecc-CCCHHHH
Q 007987 253 EINGAGINSSFAVHQ-DVDGRAT 274 (582)
Q Consensus 253 e~~G~Gv~aliAv~q-d~tgeal 274 (582)
.+.+++||- ..|.++.
T Consensus 247 ------~nvi~TPHiag~t~e~~ 263 (380)
T 2o4c_A 247 ------RCLIATPHIAGYSLEGK 263 (380)
T ss_dssp ------TCSEECSSCTTCCHHHH
T ss_pred ------CCEEEccccCcCCHHHH
Confidence 256689886 4455543
No 123
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.54 E-value=3.6e-08 Score=98.94 Aligned_cols=96 Identities=15% Similarity=0.091 Sum_probs=70.9
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
.++| ++|+|||+|.||.+++..|.+. |.+|.+.+|+.++..+.+.+.|+.. ..+..++++++|+||++|
T Consensus 126 ~~~~-~~v~iiGaG~~g~aia~~L~~~------g~~V~v~~r~~~~~~~l~~~~g~~~----~~~~~~~~~~aDiVi~at 194 (275)
T 2hk9_A 126 EVKE-KSILVLGAGGASRAVIYALVKE------GAKVFLWNRTKEKAIKLAQKFPLEV----VNSPEEVIDKVQVIVNTT 194 (275)
T ss_dssp TGGG-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSSHHHHHHHTTTSCEEE----CSCGGGTGGGCSEEEECS
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHcCCee----ehhHHhhhcCCCEEEEeC
Confidence 4678 9999999999999999999998 8888777776444344444556553 347788899999999999
Q ss_pred cchhHHHHHHHH-HhcCCCCcEEEEecC
Q 007987 187 SDAAQADNYEKI-FSCMKPNSILGLSHG 213 (582)
Q Consensus 187 Pd~a~~~Vl~eI-~~~Lk~GaiL~~a~G 213 (582)
|+....++...+ .+.+++|++|+++..
T Consensus 195 p~~~~~~~~~~i~~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 195 SVGLKDEDPEIFNYDLIKKDHVVVDIIY 222 (275)
T ss_dssp STTSSTTCCCSSCGGGCCTTSEEEESSS
T ss_pred CCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 988653211112 356788988876654
No 124
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=98.54 E-value=5.2e-08 Score=103.40 Aligned_cols=150 Identities=17% Similarity=0.122 Sum_probs=98.4
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+.| ++|||||+|+||.++|+.|+.. |++|++.++. .+ ....+.. ..+.++++++||+|+++
T Consensus 115 ~~l~g-ktvGIIGlG~IG~~vA~~l~a~------G~~V~~~d~~----~~-~~~~~~~-----~~sl~ell~~aDiV~l~ 177 (381)
T 3oet_A 115 FSLRD-RTIGIVGVGNVGSRLQTRLEAL------GIRTLLCDPP----RA-ARGDEGD-----FRTLDELVQEADVLTFH 177 (381)
T ss_dssp CCGGG-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECHH----HH-HTTCCSC-----BCCHHHHHHHCSEEEEC
T ss_pred CccCC-CEEEEEeECHHHHHHHHHHHHC------CCEEEEECCC----hH-HhccCcc-----cCCHHHHHhhCCEEEEc
Confidence 45788 9999999999999999999988 9998766542 11 1112322 56899999999999999
Q ss_pred ccchhH-----HHHH-HHHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEeccCCChhhHHHHHhhcc
Q 007987 186 ISDAAQ-----ADNY-EKIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLYVQGK 252 (582)
Q Consensus 186 VPd~a~-----~~Vl-~eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly~~G~ 252 (582)
+|.... ..++ .+.+..||+|++|+.++ |-. +..++++.+ ....+||.--.|.-+ . .++..
T Consensus 178 ~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i-~gA~LDV~e~EP~~~-~---~L~~~-- 250 (381)
T 3oet_A 178 TPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQP-LSVVLDVWEGEPDLN-V---ALLEA-- 250 (381)
T ss_dssp CCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCC-EEEEESCCTTTTSCC-H---HHHHH--
T ss_pred CcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCC-eEEEeeccccCCCCc-c---hhhhC--
Confidence 996644 3345 36778899999998765 432 223333222 223567777777432 2 24432
Q ss_pred cccCCCceEEEeecc-CCCHHHHHH-----HHHHHHHhCC
Q 007987 253 EINGAGINSSFAVHQ-DVDGRATNV-----ALGWSVALGS 286 (582)
Q Consensus 253 e~~G~Gv~aliAv~q-d~tgeale~-----alala~aiG~ 286 (582)
+.+++||- ..|.++.+. +..+..-++.
T Consensus 251 -------~~i~TPHiag~t~e~~~~~~~~~~~~l~~~l~~ 283 (381)
T 3oet_A 251 -------VDIGTSHIAGYTLEGKARGTTQVFEAYSAFIGR 283 (381)
T ss_dssp -------SSEECSSCTTCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred -------CEEECCccCcCcHHHHHHHHHHHHHHHHHHHcC
Confidence 34688886 445555443 3445555654
No 125
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.51 E-value=3.6e-08 Score=99.35 Aligned_cols=97 Identities=12% Similarity=0.138 Sum_probs=70.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhh-ccCCeEEEeccchh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDAA 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav-~~ADIVILaVPd~a 190 (582)
+||+|||+|+||.++|..|.++ |.+|.+..|.... .+.....|... .....+..+.+ +.+|+||++||+..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~------g~~V~~~~r~~~~-~~~~~~~g~~~-~~~~~~~~~~~~~~~D~vilavk~~~ 74 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQS------LPHTTLIGRHAKT-ITYYTVPHAPA-QDIVVKGYEDVTNTFDVIIIAVKTHQ 74 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHH------CTTCEEEESSCEE-EEEESSTTSCC-EEEEEEEGGGCCSCEEEEEECSCGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHC------CCeEEEEEeccCc-EEEEecCCeec-cceecCchHhcCCCCCEEEEeCCccC
Confidence 7899999999999999999998 8888777775332 11112234210 00012334544 78999999999999
Q ss_pred HHHHHHHHHhcCCCCcE-EEEecCchh
Q 007987 191 QADNYEKIFSCMKPNSI-LGLSHGFLL 216 (582)
Q Consensus 191 ~~~Vl~eI~~~Lk~Gai-L~~a~G~~i 216 (582)
..++++++.++++++++ |++..|+..
T Consensus 75 ~~~~l~~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 75 LDAVIPHLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp HHHHGGGHHHHEEEEEEEEECCSSCCC
T ss_pred HHHHHHHHHHhhCCCCEEEEeccCccc
Confidence 99999999999988875 467789864
No 126
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=98.49 E-value=1.9e-07 Score=85.93 Aligned_cols=111 Identities=10% Similarity=0.003 Sum_probs=78.3
Q ss_pred CEEEEEcc----chhHHHHHHHHHHhhhhhcCCceEEEEecCCc-ccHHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~----GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~s-ks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
++|+|||+ |+||..++++|++. |++|+..++... +. -.|... ..++.|+....|++++++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~------G~~v~~vnp~~~g~~-----i~G~~~----~~sl~el~~~~Dlvii~v 78 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQ------GYHVIPVSPKVAGKT-----LLGQQG----YATLADVPEKVDMVDVFR 78 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHH------TCCEEEECSSSTTSE-----ETTEEC----CSSTTTCSSCCSEEECCS
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHC------CCEEEEeCCcccccc-----cCCeec----cCCHHHcCCCCCEEEEEe
Confidence 88999999 89999999999998 888654433320 11 157764 567888888899999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhh
Q 007987 187 SDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
|+....++++++.. ...+.+|++.+.+.-...+. .-..++.++ .||++|-.
T Consensus 79 p~~~v~~v~~~~~~-~g~~~i~i~~~~~~~~l~~~---a~~~Gi~~i--gpnc~g~~ 129 (145)
T 2duw_A 79 NSEAAWGVAQEAIA-IGAKTLWLQLGVINEQAAVL---AREAGLSVV--MDRCPAIE 129 (145)
T ss_dssp CSTHHHHHHHHHHH-HTCCEEECCTTCCCHHHHHH---HHTTTCEEE--CSCCHHHH
T ss_pred CHHHHHHHHHHHHH-cCCCEEEEcCChHHHHHHHH---HHHcCCEEE--cCCeeeEE
Confidence 99999999988765 44566666665553222211 112355554 59998877
No 127
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=98.48 E-value=2.4e-07 Score=93.62 Aligned_cols=94 Identities=17% Similarity=0.251 Sum_probs=70.6
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+.| ++|+|||+|.||.++++.|+.. |.+|++.++...+ .+.+.+.|+... ...+.+++++++|+|+++
T Consensus 151 ~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~dr~~~~-~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 151 FTIHG-ANVAVLGLGRVGMSVARKFAAL------GAKVKVGARESDL-LARIAEMGMEPF--HISKAAQELRDVDVCINT 220 (293)
T ss_dssp SCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHHH-HHHHHHTTSEEE--EGGGHHHHTTTCSEEEEC
T ss_pred CCCCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEECCHHH-HHHHHHCCCeec--ChhhHHHHhcCCCEEEEC
Confidence 35788 9999999999999999999988 9888777765332 344456676520 024678889999999999
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+|...+. ++....|++|.+|++++
T Consensus 221 ~p~~~i~---~~~l~~mk~~~~lin~a 244 (293)
T 3d4o_A 221 IPALVVT---ANVLAEMPSHTFVIDLA 244 (293)
T ss_dssp CSSCCBC---HHHHHHSCTTCEEEECS
T ss_pred CChHHhC---HHHHHhcCCCCEEEEec
Confidence 9985442 23456789999988765
No 128
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.47 E-value=1.1e-06 Score=76.74 Aligned_cols=96 Identities=14% Similarity=0.043 Sum_probs=65.1
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHH-HcCceecCCCcCCHH----hhhccCCeEEEec
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEENGTLGDIY----ETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~-~~G~~~~d~t~~~~~----Eav~~ADIVILaV 186 (582)
++|+|||+|.+|..++..|.+. |++|++.+++..+ .+... ..|+....+...+.+ ..++++|+||+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~------g~~v~~~d~~~~~-~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 77 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK------GHDIVLIDIDKDI-CKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVT 77 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHH-HHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEee
Confidence 7899999999999999999998 8888776664333 33333 346532111122322 1267899999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 187 SDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
|+......+..+.+.++++.+|..+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 105 (140)
T 1lss_A 78 GKEEVNLMSSLLAKSYGINKTIARISEI 105 (140)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECSST
T ss_pred CCchHHHHHHHHHHHcCCCEEEEEecCH
Confidence 9886655555666667777777655544
No 129
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=98.46 E-value=3.3e-07 Score=92.86 Aligned_cols=94 Identities=21% Similarity=0.346 Sum_probs=70.8
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+.| ++|+|||+|.||.++++.|+.. |.+|++.++...+ .+.+.+.|+... ...+.+++++++|+|+++
T Consensus 153 ~~l~g-~~v~IiG~G~iG~~~a~~l~~~------G~~V~~~d~~~~~-~~~~~~~g~~~~--~~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 153 YTIHG-SQVAVLGLGRTGMTIARTFAAL------GANVKVGARSSAH-LARITEMGLVPF--HTDELKEHVKDIDICINT 222 (300)
T ss_dssp SCSTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESSHHH-HHHHHHTTCEEE--EGGGHHHHSTTCSEEEEC
T ss_pred CCCCC-CEEEEEcccHHHHHHHHHHHHC------CCEEEEEECCHHH-HHHHHHCCCeEE--chhhHHHHhhCCCEEEEC
Confidence 56889 9999999999999999999988 9988877765332 333445676420 024678899999999999
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+|+..+. ++....|++|.+|++++
T Consensus 223 ~p~~~i~---~~~~~~mk~g~~lin~a 246 (300)
T 2rir_A 223 IPSMILN---QTVLSSMTPKTLILDLA 246 (300)
T ss_dssp CSSCCBC---HHHHTTSCTTCEEEECS
T ss_pred CChhhhC---HHHHHhCCCCCEEEEEe
Confidence 9985432 24567899999888665
No 130
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.45 E-value=1.4e-06 Score=92.66 Aligned_cols=98 Identities=15% Similarity=0.194 Sum_probs=70.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--------eEEEEecCCc---ccHHHHHH-c--------CceecC--CCc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--------VVKVGLRKGS---RSFAEARA-A--------GFTEEN--GTL 169 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--------~ViVg~r~~s---ks~~~A~~-~--------G~~~~d--~t~ 169 (582)
.||+|||.|+.|.|+|.-|.++ |. +|.++.|+.. +....... . |+...+ ...
T Consensus 35 ~KI~ViGaGsWGTALA~~la~n------g~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t 108 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAEN------CKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVAN 108 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH------HHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHc------CCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEe
Confidence 4899999999999999999887 42 4766666432 11222111 1 111000 013
Q ss_pred CCHHhhhccCCeEEEeccchhHHHHHHHHHhcCCCCcEEE-EecCch
Q 007987 170 GDIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILG-LSHGFL 215 (582)
Q Consensus 170 ~~~~Eav~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~-~a~G~~ 215 (582)
.|++++++++|+||+++|.+...++++++.++++++..|+ .+.|+.
T Consensus 109 ~dl~~al~~ad~ii~avPs~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 109 PDLIDSVKDVDIIVFNIPHQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp SCHHHHHTTCSEEEECSCGGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred CCHHHHHhcCCEEEEECChhhhHHHHHHhccccCCCceeEEeccccc
Confidence 5788999999999999999999999999999999988654 556763
No 131
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=98.43 E-value=1e-05 Score=82.91 Aligned_cols=174 Identities=15% Similarity=0.182 Sum_probs=127.6
Q ss_pred HcCceecCCCcCCHHhhhccCCeEEEeccchh-HHHHHHHHHhcCCCCcEEEEecCch---hh-hhhcccccCCCCCcEE
Q 007987 159 AAGFTEENGTLGDIYETISGSDLVLLLISDAA-QADNYEKIFSCMKPNSILGLSHGFL---LG-HLQSMGLDFPKNIGVI 233 (582)
Q Consensus 159 ~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a-~~~Vl~eI~~~Lk~GaiL~~a~G~~---i~-~~~~~~i~~p~dv~VI 233 (582)
+.|+.+ +.|-.|+++++|++|+=+|-.. +.++.++|.++++.|++|+.+.-++ +. .++. .=++|+.|.
T Consensus 126 daGVkV----tsDD~EAvk~AEi~IlftPfG~~t~~Iakkii~~lpEgAII~nTCTipp~~ly~~le~---l~R~DvgIs 198 (358)
T 2b0j_A 126 DVGLKV----TSDDREAVEGADIVITWLPKGNKQPDIIKKFADAIPEGAIVTHACTIPTTKFAKIFKD---LGREDLNIT 198 (358)
T ss_dssp GGTCEE----ESCHHHHHTTCSEEEECCTTCTTHHHHHHHHGGGSCTTCEEEECSSSCHHHHHHHHHH---TTCTTSEEE
T ss_pred HcCcEe----ecchHHHhcCCCEEEEecCCCCCcHHHHHHHHhhCcCCCEEecccCCCHHHHHHHHHH---hCcccCCee
Confidence 468886 6788899999999999999666 8899999999999999998776543 22 2222 236899999
Q ss_pred EeccCC-ChhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh-hhhch
Q 007987 234 AVCPKG-MGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER-ILLGA 311 (582)
Q Consensus 234 ~v~Png-pg~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq-vLsG~ 311 (582)
..||-+ |++. |-.. +. ..-+++++.+....+++..|.. -|+ ...|+.+.. -.+-.
T Consensus 199 S~HPaaVPgt~--------------Gq~~-~g-~~yAtEEqIeklveLaksa~k~-----ay~--vPAdl~SpV~DMgs~ 255 (358)
T 2b0j_A 199 SYHPGCVPEMK--------------GQVY-IA-EGYASEEAVNKLYEIGKIARGK-----AFK--MPANLIGPVCDMCSA 255 (358)
T ss_dssp ECBCSSCTTTC--------------CCEE-EE-ESSSCHHHHHHHHHHHHHHHSC-----EEE--EEHHHHHHHHSTTHH
T ss_pred ccCCCCCCCCC--------------Cccc-cc-cccCCHHHHHHHHHHHHHhCCC-----eEe--cchhhccchhhhHHH
Confidence 999933 3332 3322 33 5678999999999999999985 222 334455532 12222
Q ss_pred HHHH----HHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHhcHHHHHHhcCc
Q 007987 312 VHGI----VESLFRRFTE-NGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSG 363 (582)
Q Consensus 312 ~pAl----ieAl~d~lVe-~Gl~pe~Ay~~~~~ei~glia~lI~e~Gi~~m~d~vS~ 363 (582)
+.+. +-.-++...+ .|-|.+++-..+.++|. .|+.++...|+..|.+.+..
T Consensus 256 vTAv~~AGiL~Y~~~vtkIlgAP~~mie~q~~esL~-tiasLve~~GI~gm~k~LnP 311 (358)
T 2b0j_A 256 VTATVYAGLLAYRDAVTKILGAPADFAQMMADEALT-QIHNLMKEKGIANMEEALDP 311 (358)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHH-HHHHHHHHHCGGGHHHHSCG
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHhcCH
Confidence 2222 4555556644 69999999999999986 49999999999999999876
No 132
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=98.42 E-value=3.1e-07 Score=95.50 Aligned_cols=117 Identities=19% Similarity=0.126 Sum_probs=83.4
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
...+.| ++|||||+|.+|..+|+.++.. |++|+++++.. + +...+.|+. ..+.+|++++||+|++
T Consensus 136 ~~~l~g-~tvGIiG~G~IG~~va~~~~~f------g~~v~~~d~~~-~--~~~~~~~~~-----~~~l~ell~~sDivsl 200 (334)
T 3kb6_A 136 ARELNR-LTLGVIGTGRIGSRVAMYGLAF------GMKVLCYDVVK-R--EDLKEKGCV-----YTSLDELLKESDVISL 200 (334)
T ss_dssp BCCGGG-SEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSC-C--HHHHHTTCE-----ECCHHHHHHHCSEEEE
T ss_pred cceecC-cEEEEECcchHHHHHHHhhccc------CceeeecCCcc-c--hhhhhcCce-----ecCHHHHHhhCCEEEE
Confidence 467899 9999999999999999999887 99987665432 2 234456666 4689999999999999
Q ss_pred eccchhHH-HHHH-HHHhcCCCCcEEEEec-Cch------hhhhhcccccCCCCCcEEEecc
Q 007987 185 LISDAAQA-DNYE-KIFSCMKPNSILGLSH-GFL------LGHLQSMGLDFPKNIGVIAVCP 237 (582)
Q Consensus 185 aVPd~a~~-~Vl~-eI~~~Lk~GaiL~~a~-G~~------i~~~~~~~i~~p~dv~VI~v~P 237 (582)
++|-.... .++. +.+..||+|++|+-++ |-. +..++++.+ -...+||.--.|
T Consensus 201 h~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i-~gA~LDV~~~EP 261 (334)
T 3kb6_A 201 HVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKF-SGLGLDVFEDEE 261 (334)
T ss_dssp CCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCE-EEEEESCCTTHH
T ss_pred cCCCChhhccCcCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCc-eEEEEeCCCCCC
Confidence 99965543 4554 6778899999988553 432 334444322 123456665555
No 133
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.40 E-value=1.2e-07 Score=85.44 Aligned_cols=90 Identities=20% Similarity=0.152 Sum_probs=67.4
Q ss_pred CCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch
Q 007987 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (582)
Q Consensus 110 gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~ 189 (582)
| ++|+|||+|.||.++++.|+.. |++|++..++..+..+.+.+.|... ....+..++++++|+||.++|..
T Consensus 21 ~-~~v~iiG~G~iG~~~a~~l~~~------g~~v~v~~r~~~~~~~~a~~~~~~~--~~~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 21 G-NKILLVGNGMLASEIAPYFSYP------QYKVTVAGRNIDHVRAFAEKYEYEY--VLINDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp C-CEEEEECCSHHHHHHGGGCCTT------TCEEEEEESCHHHHHHHHHHHTCEE--EECSCHHHHHHTCSEEEECSCCS
T ss_pred C-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEcCCHHHHHHHHHHhCCce--EeecCHHHHhcCCCEEEEeCCCC
Confidence 7 9999999999999999999887 8887777776555555577777542 11457888999999999999976
Q ss_pred hHHHHHHHHHhcCCCCcEEEEec
Q 007987 190 AQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
.. ++. ...+++|.++++.+
T Consensus 92 ~~--~~~--~~~l~~g~~vid~~ 110 (144)
T 3oj0_A 92 TP--IVE--ERSLMPGKLFIDLG 110 (144)
T ss_dssp SC--SBC--GGGCCTTCEEEECC
T ss_pred Cc--Eee--HHHcCCCCEEEEcc
Confidence 22 121 25677888777653
No 134
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.39 E-value=3.2e-07 Score=93.89 Aligned_cols=91 Identities=12% Similarity=0.146 Sum_probs=67.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcC--ceecCCCcCCHHhhhccCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG--FTEENGTLGDIYETISGSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G--~~~~d~t~~~~~Eav~~ADIVILaVPd 188 (582)
++|+|||+|.||.+++.+|.+. .|+ +|.+++|+.++..+.+.+.| +.. +.+++++++++|+|+++||.
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~-----~g~~~V~v~dr~~~~~~~l~~~~~~~~~~----~~~~~e~v~~aDiVi~atp~ 206 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQ-----FSFKEVRIWNRTKENAEKFADTVQGEVRV----CSSVQEAVAGADVIITVTLA 206 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CCCSEEEEECSSHHHHHHHHHHSSSCCEE----CSSHHHHHTTCSEEEECCCC
T ss_pred cEEEEECCcHHHHHHHHHHHHh-----CCCcEEEEEcCCHHHHHHHHHHhhCCeEE----eCCHHHHHhcCCEEEEEeCC
Confidence 8999999999999999999864 155 77777776555445555556 553 56889999999999999995
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEecCch
Q 007987 189 AAQADNYEKIFSCMKPNSILGLSHGFL 215 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~~a~G~~ 215 (582)
. ..++.. +.+++|++|++.+++.
T Consensus 207 ~--~~v~~~--~~l~~g~~vi~~g~~~ 229 (312)
T 2i99_A 207 T--EPILFG--EWVKPGAHINAVGASR 229 (312)
T ss_dssp S--SCCBCG--GGSCTTCEEEECCCCS
T ss_pred C--CcccCH--HHcCCCcEEEeCCCCC
Confidence 2 233332 5788999888765553
No 135
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=98.39 E-value=8.9e-06 Score=92.89 Aligned_cols=191 Identities=13% Similarity=0.107 Sum_probs=126.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-----------cCceec-C-----CCcCC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-----------AGFTEE-N-----GTLGD 171 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-----------~G~~~~-d-----~t~~~ 171 (582)
+.+++|+|||.|.||..||..+..+ |++|++.+.+. +..+.+.+ .+.... + -...+
T Consensus 314 ~~i~~v~ViGaG~MG~gIA~~~a~a------G~~V~l~D~~~-~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 386 (742)
T 3zwc_A 314 QPVSSVGVLGLGTMGRGIAISFARV------GISVVAVESDP-KQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSS 386 (742)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHTT------TCEEEEECSSH-HHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEES
T ss_pred ccccEEEEEcccHHHHHHHHHHHhC------CCchhcccchH-hhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccC
Confidence 3458999999999999999999988 99998766543 22222211 110000 0 00122
Q ss_pred HHhhhccCCeEEEeccchhH--HHHHHHHHhcCCCCcEE-EEecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHH
Q 007987 172 IYETISGSDLVLLLISDAAQ--ADNYEKIFSCMKPNSIL-GLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (582)
Q Consensus 172 ~~Eav~~ADIVILaVPd~a~--~~Vl~eI~~~Lk~GaiL-~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly 248 (582)
..+.+++||+||=+++-..- .+++.+|-+++++++|| +-++++.+..+.+ .....-+|+..|+=-|.+.
T Consensus 387 ~~~~l~~aDlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSsl~i~~ia~---~~~~p~r~ig~HFfnP~~~----- 458 (742)
T 3zwc_A 387 STKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIAS---STDRPQLVIGTHFFSPAHV----- 458 (742)
T ss_dssp CGGGGGSCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHT---TSSCGGGEEEEECCSSTTT-----
T ss_pred cHHHHhhCCEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCcCChHHHHh---hcCCccccccccccCCCCC-----
Confidence 23457899999999996655 35999999999999998 4778888887765 2333457999999888887
Q ss_pred hhcccccCCCceEE-EeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhhhhhch-HHHHHHHHHHHHHHc
Q 007987 249 VQGKEINGAGINSS-FAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGERILLGA-VHGIVESLFRRFTEN 326 (582)
Q Consensus 249 ~~G~e~~G~Gv~al-iAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEqvLsG~-~pAlieAl~d~lVe~ 326 (582)
++.+ |.++..++++.++.+.++.+.+|...+. . .++.-| +.+= +.+++..+. .+++.
T Consensus 459 ----------m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV~----v--kd~pGF----i~NRi~~~~~~ea~-~l~~e 517 (742)
T 3zwc_A 459 ----------MRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVV----V--GNCYGF----VGNRMLAPYYNQGF-FLLEE 517 (742)
T ss_dssp ----------CCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEE----C--CCSTTT----THHHHHHHHHHHHH-HHHHT
T ss_pred ----------CceEEEecCCCCCHHHHHHHHHHHHHhCCCCcc----c--CCCCCc----cHHHHhhHHHHHHH-HHHHc
Confidence 3331 4557889999999999999999975211 1 112112 2222 223333333 46677
Q ss_pred CCCHHHHHH
Q 007987 327 GMNEDLAYK 335 (582)
Q Consensus 327 Gl~pe~Ay~ 335 (582)
|.++++--.
T Consensus 518 G~~~~~id~ 526 (742)
T 3zwc_A 518 GSKPEDVDG 526 (742)
T ss_dssp TCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 888876544
No 136
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=98.38 E-value=2.6e-07 Score=100.62 Aligned_cols=94 Identities=18% Similarity=0.222 Sum_probs=73.3
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+.| ++|+|||+|.||.++|+.|+.. |.+|++.++.. .....+...|+. +.++++++++||+|+++
T Consensus 253 ~~l~G-ktVgIIG~G~IG~~vA~~l~~~------G~~Viv~d~~~-~~~~~a~~~g~~-----~~~l~ell~~aDiVi~~ 319 (479)
T 1v8b_A 253 FLISG-KIVVICGYGDVGKGCASSMKGL------GARVYITEIDP-ICAIQAVMEGFN-----VVTLDEIVDKGDFFITC 319 (479)
T ss_dssp CCCTT-SEEEEECCSHHHHHHHHHHHHH------TCEEEEECSCH-HHHHHHHTTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred cccCC-CEEEEEeeCHHHHHHHHHHHhC------cCEEEEEeCCh-hhHHHHHHcCCE-----ecCHHHHHhcCCEEEEC
Confidence 46889 9999999999999999999988 99987766542 223356677886 46899999999999999
Q ss_pred ccchhHHHHH-HHHHhcCCCCcEEEEecCch
Q 007987 186 ISDAAQADNY-EKIFSCMKPNSILGLSHGFL 215 (582)
Q Consensus 186 VPd~a~~~Vl-~eI~~~Lk~GaiL~~a~G~~ 215 (582)
+... .++ .+.+..||+|++|+.++-+.
T Consensus 320 ~~t~---~lI~~~~l~~MK~gailiNvgrg~ 347 (479)
T 1v8b_A 320 TGNV---DVIKLEHLLKMKNNAVVGNIGHFD 347 (479)
T ss_dssp CSSS---SSBCHHHHTTCCTTCEEEECSSTT
T ss_pred CChh---hhcCHHHHhhcCCCcEEEEeCCCC
Confidence 7432 334 36778899999998665443
No 137
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=98.38 E-value=4e-07 Score=98.07 Aligned_cols=92 Identities=16% Similarity=0.185 Sum_probs=72.6
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+.| ++|+|||+|.+|.++|+.|+.. |.+|++.++. +.....|...|+. ..+++|++++||+|+++
T Consensus 207 ~~L~G-ktVgIiG~G~IG~~vA~~Lka~------Ga~Viv~D~~-p~~a~~A~~~G~~-----~~sL~eal~~ADVVilt 273 (436)
T 3h9u_A 207 VMIAG-KTACVCGYGDVGKGCAAALRGF------GARVVVTEVD-PINALQAAMEGYQ-----VLLVEDVVEEAHIFVTT 273 (436)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred CcccC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEECCC-hhhhHHHHHhCCe-----ecCHHHHHhhCCEEEEC
Confidence 55789 9999999999999999999988 9998776553 3334556778887 46899999999999987
Q ss_pred ccchhHHHHHH-HHHhcCCCCcEEEEecC
Q 007987 186 ISDAAQADNYE-KIFSCMKPNSILGLSHG 213 (582)
Q Consensus 186 VPd~a~~~Vl~-eI~~~Lk~GaiL~~a~G 213 (582)
+..... +. +.+..||+|++|+.++-
T Consensus 274 ~gt~~i---I~~e~l~~MK~gAIVINvgR 299 (436)
T 3h9u_A 274 TGNDDI---ITSEHFPRMRDDAIVCNIGH 299 (436)
T ss_dssp SSCSCS---BCTTTGGGCCTTEEEEECSS
T ss_pred CCCcCc---cCHHHHhhcCCCcEEEEeCC
Confidence 654332 33 56788999999886653
No 138
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=98.36 E-value=2.6e-07 Score=101.08 Aligned_cols=93 Identities=19% Similarity=0.192 Sum_probs=72.4
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+.| ++|+|||+|.||.++|+.|+.. |.+|++.++.. .....+...|+. +.++++++++||+|+++
T Consensus 273 ~~L~G-ktVgIIG~G~IG~~vA~~l~~~------G~~V~v~d~~~-~~~~~a~~~G~~-----~~~l~ell~~aDiVi~~ 339 (494)
T 3d64_A 273 VMIAG-KIAVVAGYGDVGKGCAQSLRGL------GATVWVTEIDP-ICALQAAMEGYR-----VVTMEYAADKADIFVTA 339 (494)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHTT------TCEEEEECSCH-HHHHHHHTTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred cccCC-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCCh-HhHHHHHHcCCE-----eCCHHHHHhcCCEEEEC
Confidence 46899 9999999999999999999987 99987766543 223345566877 46899999999999999
Q ss_pred ccchhHHHHH-HHHHhcCCCCcEEEEecCc
Q 007987 186 ISDAAQADNY-EKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 186 VPd~a~~~Vl-~eI~~~Lk~GaiL~~a~G~ 214 (582)
+... .++ .+.+..||+|++|+.++-+
T Consensus 340 ~~t~---~lI~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 340 TGNY---HVINHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp SSSS---CSBCHHHHHHCCTTEEEEECSSS
T ss_pred CCcc---cccCHHHHhhCCCCcEEEEcCCC
Confidence 8422 234 3677889999999866543
No 139
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=98.32 E-value=1.2e-06 Score=94.80 Aligned_cols=94 Identities=24% Similarity=0.255 Sum_probs=74.0
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+.| |+++|||+|.+|..+|+.++.. |.+|++..+. +.....+...|+. +.++++++++||+|+++
T Consensus 243 ~~L~G-KTVgVIG~G~IGr~vA~~lraf------Ga~Viv~d~d-p~~a~~A~~~G~~-----vv~LeElL~~ADIVv~a 309 (464)
T 3n58_A 243 VMMAG-KVAVVCGYGDVGKGSAQSLAGA------GARVKVTEVD-PICALQAAMDGFE-----VVTLDDAASTADIVVTT 309 (464)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSS-HHHHHHHHHTTCE-----ECCHHHHGGGCSEEEEC
T ss_pred CcccC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCC-cchhhHHHhcCce-----eccHHHHHhhCCEEEEC
Confidence 46889 9999999999999999999988 9998877654 3334556677887 46899999999999998
Q ss_pred ccchhHHHHH-HHHHhcCCCCcEEEEecCch
Q 007987 186 ISDAAQADNY-EKIFSCMKPNSILGLSHGFL 215 (582)
Q Consensus 186 VPd~a~~~Vl-~eI~~~Lk~GaiL~~a~G~~ 215 (582)
+... .++ .+.+..||+|++|+.++-+.
T Consensus 310 tgt~---~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 310 TGNK---DVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp CSSS---SSBCHHHHHHSCTTEEEEECSSST
T ss_pred CCCc---cccCHHHHhcCCCCeEEEEcCCCC
Confidence 7542 244 46777899999998665444
No 140
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=98.32 E-value=3.3e-07 Score=90.89 Aligned_cols=89 Identities=19% Similarity=0.134 Sum_probs=66.8
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEecc
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVP 187 (582)
++| +|+|||+|.||.+++.+|.+. |.+|.+.+|+.++..+.+.+.|.. ..+.+++ +++|+||++||
T Consensus 115 l~~--~v~iiG~G~~g~~~a~~l~~~------g~~v~v~~r~~~~~~~l~~~~~~~-----~~~~~~~-~~~Divi~~tp 180 (263)
T 2d5c_A 115 LKG--PALVLGAGGAGRAVAFALREA------GLEVWVWNRTPQRALALAEEFGLR-----AVPLEKA-REARLLVNATR 180 (263)
T ss_dssp CCS--CEEEECCSHHHHHHHHHHHHT------TCCEEEECSSHHHHHHHHHHHTCE-----ECCGGGG-GGCSEEEECSS
T ss_pred CCC--eEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHhccc-----hhhHhhc-cCCCEEEEccC
Confidence 566 899999999999999999988 888877777654444555555654 3567788 99999999999
Q ss_pred chhHHH---HHHHHHhcCCCCcEEEEec
Q 007987 188 DAAQAD---NYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 188 d~a~~~---Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+..+.. ++. .+.+++|++|++..
T Consensus 181 ~~~~~~~~~~l~--~~~l~~g~~viD~~ 206 (263)
T 2d5c_A 181 VGLEDPSASPLP--AELFPEEGAAVDLV 206 (263)
T ss_dssp TTTTCTTCCSSC--GGGSCSSSEEEESC
T ss_pred CCCCCCCCCCCC--HHHcCCCCEEEEee
Confidence 886432 222 45688888877643
No 141
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.30 E-value=5.7e-07 Score=98.26 Aligned_cols=115 Identities=12% Similarity=0.098 Sum_probs=92.9
Q ss_pred hHHHHHHHHHHHHHHHHhCCChhhhhhhhHHHHhhhcchhhhhccchhhhhccchhhhccccccccchhHHH---HHHHH
Q 007987 450 AGVYAALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYIL---TQQAL 526 (582)
Q Consensus 450 ~gv~~~~~~a~~~~l~~~~~~~s~~~~e~~~e~~~~l~p~~~~~~~~~m~~~~s~ta~~g~~~~~~~~~~~~---~~~~~ 526 (582)
.|...+.+.|.+|.|.+.|+++..+++|.+.|.++.+.++|.+.|+++|+++||+||+..--+|......-. ++++|
T Consensus 253 sG~~pAlieA~~d~lVe~G~~pe~Ay~~~~qel~~~i~~li~e~G~~~m~~~~S~ta~~~~~~~~~~~~~~~~~~m~~~~ 332 (525)
T 3fr7_A 253 LGAVHGIVEALFRRYTEQGMDEEMAYKNTVEGITGIISKTISKKGMLEVYNSLTEEGKKEFNKAYSASFYPCMDILYECY 332 (525)
T ss_dssp THHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTHHHHHHHHHCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHcCcHHHHHHHHHhccchHHHHHHHHHHH
Confidence 577788889999999999999999999999999989999999999999999999996522112111112222 58999
Q ss_pred hhhcCCCccchhHHH----------------hhhcChHHHHHHHhhccCCccee
Q 007987 527 VAVDNDAPINGDLIS----------------NFLSDPVHGAIEVCAQLRPTVDI 564 (582)
Q Consensus 527 ~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ 564 (582)
..|++|+.+++-+.+ .+++|.+.++=+.-.+|||.-+|
T Consensus 333 ~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vr~~r~~~~~ 386 (525)
T 3fr7_A 333 EDVASGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTRMWKVGEKVRSTRPENDL 386 (525)
T ss_dssp HHHHHSHHHHHHHHHHHTTSCBTTBCCCCCCCSTTSHHHHHHHHHHHHCCTTCC
T ss_pred HHHhCCHHHHHHHHhcCccchhccccccchhhhcccHHHHHHHHHHhcCCcccC
Confidence 999999877655544 35678889999999999999887
No 142
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=98.21 E-value=1.5e-06 Score=92.18 Aligned_cols=97 Identities=13% Similarity=0.075 Sum_probs=71.2
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecC---------CC----------
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN---------GT---------- 168 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d---------~t---------- 168 (582)
+.+ .||+|||+|.+|...++.++.. |.+|++.+++. ...+.+.+.|....+ +.
T Consensus 182 v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~-~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~ 253 (381)
T 3p2y_A 182 VKP-ASALVLGVGVAGLQALATAKRL------GAKTTGYDVRP-EVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERA 253 (381)
T ss_dssp ECC-CEEEEESCSHHHHHHHHHHHHH------TCEEEEECSSG-GGHHHHHHTTCEECCCC-------------CHHHHH
T ss_pred cCC-CEEEEECchHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHcCCeEEeccccccccccchhhhhHHHHh
Confidence 466 8999999999999999999988 99887766654 446667777765311 00
Q ss_pred --cCCHHhhhccCCeEEEec--cchhHHHHH-HHHHhcCCCCcEEEEec
Q 007987 169 --LGDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (582)
Q Consensus 169 --~~~~~Eav~~ADIVILaV--Pd~a~~~Vl-~eI~~~Lk~GaiL~~a~ 212 (582)
..+++++++++|+||.++ |......++ ++....||+|.+|++.+
T Consensus 254 ~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 254 QQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred hhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 113568899999999875 433333333 57888899999999886
No 143
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=98.20 E-value=2.1e-06 Score=88.28 Aligned_cols=119 Identities=13% Similarity=0.146 Sum_probs=85.4
Q ss_pred CEEEEE-cc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEecc
Q 007987 112 NQIGVI-GW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (582)
Q Consensus 112 kkIgII-G~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVP 187 (582)
++|+|| |+ |++|..++++|++. |+++++..++.... .+-.|+.. ..+++|+.+ ..|++++++|
T Consensus 14 ~siaVV~Gasg~~G~~~~~~l~~~------G~~~v~~VnP~~~g---~~i~G~~v----y~sl~el~~~~~vD~avI~vP 80 (305)
T 2fp4_A 14 NTKVICQGFTGKQGTFHSQQALEY------GTNLVGGTTPGKGG---KTHLGLPV----FNTVKEAKEQTGATASVIYVP 80 (305)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHHCCCEEEECCC
T ss_pred CcEEEEECCCCCHHHHHHHHHHHC------CCcEEEEeCCCcCc---ceECCeee----echHHHhhhcCCCCEEEEecC
Confidence 889999 99 99999999999999 99865555543211 01257775 568999888 8999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCC-cEEEeccCCChhhHH
Q 007987 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNI-GVIAVCPKGMGPSVR 245 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv-~VI~v~Pngpg~~vR 245 (582)
++.+.+++++.... .-+.+|.+++|+..+...+ .+...+.. .+..+.||+||...+
T Consensus 81 ~~~~~~~~~e~i~~-Gi~~iv~~t~G~~~~~~~~-l~~~a~~~~gi~liGPnc~Gii~p 137 (305)
T 2fp4_A 81 PPFAAAAINEAIDA-EVPLVVCITEGIPQQDMVR-VKHRLLRQGKTRLIGPNCPGVINP 137 (305)
T ss_dssp HHHHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHTTCSSCEEECSSSCEEEET
T ss_pred HHHHHHHHHHHHHC-CCCEEEEECCCCChHHHHH-HHHHHHhcCCcEEEeCCCCeEecc
Confidence 99999999975442 2345788999997653111 11222333 455678999998853
No 144
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.18 E-value=4e-06 Score=85.21 Aligned_cols=94 Identities=16% Similarity=0.121 Sum_probs=62.6
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCC--ceEEEEecCCcccHHHHHHcC---------ceecCCCcCCHHhhhccC
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARAAG---------FTEENGTLGDIYETISGS 179 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G--~~ViVg~r~~sks~~~A~~~G---------~~~~d~t~~~~~Eav~~A 179 (582)
|+||+|||.|+||.++|..|... | .+|++.+++..+....+...+ +.. ...+. +++++|
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~------g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~d~-~~~~~a 70 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ------GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNI---VINDW-AALADA 70 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEE---EESCG-GGGTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEE---EeCCH-HHhCCC
Confidence 47999999999999999999988 7 577766665333333332211 121 02455 788999
Q ss_pred CeEEEeccchhH--------------------HHHHHHHHhcCCCCcEE-EEecCch
Q 007987 180 DLVLLLISDAAQ--------------------ADNYEKIFSCMKPNSIL-GLSHGFL 215 (582)
Q Consensus 180 DIVILaVPd~a~--------------------~~Vl~eI~~~Lk~GaiL-~~a~G~~ 215 (582)
|+||+++|+... .+++++|.++. ++.+| .++-+..
T Consensus 71 DvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~ 126 (309)
T 1hyh_A 71 DVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNPVD 126 (309)
T ss_dssp SEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHH
T ss_pred CEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCcHH
Confidence 999999997653 45666676665 45544 4554554
No 145
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=98.18 E-value=1.3e-06 Score=94.11 Aligned_cols=92 Identities=23% Similarity=0.266 Sum_probs=71.7
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+.| ++|+|||+|.+|.++|+.|+.. |.+|++.+++ +.....|...|+. +.+++++++++|+|+++
T Consensus 216 ~~L~G-ktV~ViG~G~IGk~vA~~Lra~------Ga~Viv~D~d-p~ra~~A~~~G~~-----v~~Leeal~~ADIVi~a 282 (435)
T 3gvp_A 216 MMFGG-KQVVVCGYGEVGKGCCAALKAM------GSIVYVTEID-PICALQACMDGFR-----LVKLNEVIRQVDIVITC 282 (435)
T ss_dssp CCCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHTTTCSEEEEC
T ss_pred ceecC-CEEEEEeeCHHHHHHHHHHHHC------CCEEEEEeCC-hhhhHHHHHcCCE-----eccHHHHHhcCCEEEEC
Confidence 45789 9999999999999999999988 9998776654 3334557778886 46899999999999997
Q ss_pred ccchhHHHHHH-HHHhcCCCCcEEEEecC
Q 007987 186 ISDAAQADNYE-KIFSCMKPNSILGLSHG 213 (582)
Q Consensus 186 VPd~a~~~Vl~-eI~~~Lk~GaiL~~a~G 213 (582)
+-. ..++. +.+..||+|.+|+.++-
T Consensus 283 tgt---~~lI~~e~l~~MK~gailINvgr 308 (435)
T 3gvp_A 283 TGN---KNVVTREHLDRMKNSCIVCNMGH 308 (435)
T ss_dssp SSC---SCSBCHHHHHHSCTTEEEEECSS
T ss_pred CCC---cccCCHHHHHhcCCCcEEEEecC
Confidence 331 22454 67778999998886543
No 146
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=98.16 E-value=3.2e-06 Score=92.40 Aligned_cols=92 Identities=22% Similarity=0.321 Sum_probs=73.2
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
.+.| ++|+|||+|.+|..+|+.++.. |.+|++.++. ....+.|.+.|+. +.+.+++++++|+||+++
T Consensus 271 ~l~G-ktV~IiG~G~IG~~~A~~lka~------Ga~Viv~d~~-~~~~~~A~~~Ga~-----~~~l~e~l~~aDvVi~at 337 (494)
T 3ce6_A 271 LIGG-KKVLICGYGDVGKGCAEAMKGQ------GARVSVTEID-PINALQAMMEGFD-----VVTVEEAIGDADIVVTAT 337 (494)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCHHHHGGGCSEEEECS
T ss_pred CCCc-CEEEEEccCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCE-----EecHHHHHhCCCEEEECC
Confidence 5788 9999999999999999999988 9887665543 4445678888986 357888999999999999
Q ss_pred cchhHHHHHH-HHHhcCCCCcEEEEecCc
Q 007987 187 SDAAQADNYE-KIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 187 Pd~a~~~Vl~-eI~~~Lk~GaiL~~a~G~ 214 (582)
+.... +. +....|++|.+|+.++-+
T Consensus 338 gt~~~---i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 338 GNKDI---IMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp SSSCS---BCHHHHHHSCTTCEEEECSSS
T ss_pred CCHHH---HHHHHHHhcCCCcEEEEeCCC
Confidence 86542 33 566779999998866543
No 147
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.14 E-value=4.2e-06 Score=81.64 Aligned_cols=79 Identities=22% Similarity=0.217 Sum_probs=58.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhh-ccCCeEEEeccch
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDA 189 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav-~~ADIVILaVPd~ 189 (582)
++|||||+|.||..++++|.+. |++++ +.++. .+. .+ . +.++++++ .++|+|++++|+.
T Consensus 1 m~vgiIG~G~mG~~~~~~l~~~------g~~lv~v~d~~-~~~----~~---~-----~~~~~~l~~~~~DvVv~~~~~~ 61 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLERN------GFEIAAILDVR-GEH----EK---M-----VRGIDEFLQREMDVAVEAASQQ 61 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSS-CCC----TT---E-----ESSHHHHTTSCCSEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHhcC------CCEEEEEEecC-cch----hh---h-----cCCHHHHhcCCCCEEEECCCHH
Confidence 4799999999999999999876 88764 44443 221 11 2 56888888 6999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEEEec
Q 007987 190 AQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
.+.+++.. .++.|+.|++..
T Consensus 62 ~~~~~~~~---~l~~G~~vv~~~ 81 (236)
T 2dc1_A 62 AVKDYAEK---ILKAGIDLIVLS 81 (236)
T ss_dssp HHHHHHHH---HHHTTCEEEESC
T ss_pred HHHHHHHH---HHHCCCcEEEEC
Confidence 88777654 345677665443
No 148
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=98.12 E-value=4.2e-06 Score=85.15 Aligned_cols=117 Identities=15% Similarity=0.209 Sum_probs=80.7
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccc
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd 188 (582)
.+|+|||+ |.||..++++|++. |++++...++.... ....|+.. ..+++|+.+ ..|++++++|+
T Consensus 8 ~rVaViG~sG~~G~~~~~~l~~~------g~~~V~~V~p~~~g---~~~~G~~v----y~sl~el~~~~~~D~viI~tP~ 74 (288)
T 2nu8_A 8 TKVICQGFTGSQGTFHSEQAIAY------GTKMVGGVTPGKGG---TTHLGLPV----FNTVREAVAATGATASVIYVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHHCCCEEEECCCG
T ss_pred CEEEEECCCChHHHHHHHHHHHC------CCeEEEEeCCCccc---ceeCCeec----cCCHHHHhhcCCCCEEEEecCH
Confidence 78999999 99999999999988 88865455442110 01357764 568899887 89999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhh
Q 007987 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
..+.+++.+.... ....+|.++.|+..+..++ .....+...+..+.||++|..
T Consensus 75 ~~~~~~~~ea~~~-Gi~~iVi~t~G~~~~~~~~-l~~~A~~~gv~liGPNc~Gi~ 127 (288)
T 2nu8_A 75 PFCKDSILEAIDA-GIKLIITITEGIPTLDMLT-VKVKLDEAGVRMIGPNTPGVI 127 (288)
T ss_dssp GGHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHHHHTCEEECSSCCEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEecCCccee
Confidence 9999999875542 2233567889997543211 111112233444779998877
No 149
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=98.11 E-value=1.2e-05 Score=73.71 Aligned_cols=120 Identities=9% Similarity=0.048 Sum_probs=81.0
Q ss_pred cccc-CCCEEEEEcc----chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCC
Q 007987 106 DAFN-GINQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSD 180 (582)
Q Consensus 106 ~~l~-gikkIgIIG~----GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~AD 180 (582)
..|+ - ++|+|||+ |.+|..++++|++. |++| +......+ .-.|... ..+++|+....|
T Consensus 17 ~ll~~p-~~iaVVGas~~~g~~G~~~~~~l~~~------G~~v-~~Vnp~~~-----~i~G~~~----y~sl~~l~~~vD 79 (144)
T 2d59_A 17 EILTRY-KKIALVGASPKPERDANIVMKYLLEH------GYDV-YPVNPKYE-----EVLGRKC----YPSVLDIPDKIE 79 (144)
T ss_dssp HHHHHC-CEEEEETCCSCTTSHHHHHHHHHHHT------TCEE-EEECTTCS-----EETTEEC----BSSGGGCSSCCS
T ss_pred HHHcCC-CEEEEEccCCCCCchHHHHHHHHHHC------CCEE-EEECCCCC-----eECCeec----cCCHHHcCCCCC
Confidence 3454 4 89999999 79999999999998 8874 33332211 1147664 567888888899
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHH
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly 248 (582)
++++++|+..+.++++++...- .+. +++..|+.-..+.+ ..-..+++++ .||+++-...+++
T Consensus 80 lvvi~vp~~~~~~vv~~~~~~g-i~~-i~~~~g~~~~~l~~--~a~~~Gi~vv--Gpnc~gv~~~~~~ 141 (144)
T 2d59_A 80 VVDLFVKPKLTMEYVEQAIKKG-AKV-VWFQYNTYNREASK--KADEAGLIIV--ANRCMMREHERLL 141 (144)
T ss_dssp EEEECSCHHHHHHHHHHHHHHT-CSE-EEECTTCCCHHHHH--HHHHTTCEEE--ESCCHHHHHHHHH
T ss_pred EEEEEeCHHHHHHHHHHHHHcC-CCE-EEECCCchHHHHHH--HHHHcCCEEE--cCCchhhcchhhc
Confidence 9999999999999998865532 233 44556653221111 0112366655 4999998877665
No 150
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=98.11 E-value=4e-06 Score=85.40 Aligned_cols=118 Identities=14% Similarity=0.188 Sum_probs=82.4
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccc
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd 188 (582)
++|+|+|+ |+||..++++|++. |++++....+.... ..-.|+.. ..+++|+.+ ..|++++++|+
T Consensus 8 ~~VaVvGasG~~G~~~~~~l~~~------g~~~v~~VnP~~~g---~~i~G~~v----y~sl~el~~~~~~Dv~Ii~vp~ 74 (288)
T 1oi7_A 8 TRVLVQGITGREGQFHTKQMLTY------GTKIVAGVTPGKGG---MEVLGVPV----YDTVKEAVAHHEVDASIIFVPA 74 (288)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT---CEETTEEE----ESSHHHHHHHSCCSEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHHc------CCeEEEEECCCCCC---ceECCEEe----eCCHHHHhhcCCCCEEEEecCH
Confidence 78999998 99999999999998 88865555543210 01357775 568899888 89999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhhH
Q 007987 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~v 244 (582)
....+++++.... .-..+|+++.||..+..++ .....+...+..+.||++|...
T Consensus 75 ~~~~~~~~ea~~~-Gi~~vVi~t~G~~~~~~~~-l~~~a~~~gi~vigPNc~Gii~ 128 (288)
T 1oi7_A 75 PAAADAALEAAHA-GIPLIVLITEGIPTLDMVR-AVEEIKALGSRLIGGNCPGIIS 128 (288)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCHHHHHH-HHHHHHHHTCEEEESSSCEEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEeCCCCeEEc
Confidence 9999999875542 2234677899997542211 1111122344456699988773
No 151
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=98.08 E-value=7.8e-06 Score=83.58 Aligned_cols=79 Identities=16% Similarity=0.166 Sum_probs=60.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd 188 (582)
.+|||||+|.||..++.+|++. .+++++ +.+++..+..+.+.+.|... ..+.+++++ +.|+|++++|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 75 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAAN-----PDLELVVIADPFIEGAQRLAEANGAEA----VASPDEVFARDDIDGIVIGSPT 75 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHTTTCEE----ESSHHHHTTCSCCCEEEECSCG
T ss_pred eEEEEECCcHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999875 156665 33443334344566667654 678999998 89999999999
Q ss_pred hhHHHHHHHHH
Q 007987 189 AAQADNYEKIF 199 (582)
Q Consensus 189 ~a~~~Vl~eI~ 199 (582)
..+.++.....
T Consensus 76 ~~h~~~~~~al 86 (344)
T 3euw_A 76 STHVDLITRAV 86 (344)
T ss_dssp GGHHHHHHHHH
T ss_pred hhhHHHHHHHH
Confidence 99988776543
No 152
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.06 E-value=2.8e-06 Score=88.88 Aligned_cols=95 Identities=18% Similarity=0.157 Sum_probs=67.1
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCC-ceEEEEecCCcccHHHHHHc----CceecCCCcCCHHhhhccCCeEEEec
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAA----GFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G-~~ViVg~r~~sks~~~A~~~----G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
++|+|||+|.||.+++.+|... .+ .+|.+.+|+.++..+.+.+. |+.. ..+.+.+++++++|+|+++|
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~-----~~~~~V~V~~r~~~~a~~la~~~~~~~g~~~--~~~~~~~eav~~aDiVi~aT 202 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKH-----LGIEEIVAYDTDPLATAKLIANLKEYSGLTI--RRASSVAEAVKGVDIITTVT 202 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHH-----SCCCEEEEECSSHHHHHHHHHHHTTCTTCEE--EECSSHHHHHTTCSEEEECC
T ss_pred CeEEEECCcHHHHHHHHHHHHh-----CCCcEEEEEcCCHHHHHHHHHHHHhccCceE--EEeCCHHHHHhcCCEEEEec
Confidence 8999999999999999998753 03 36777777655555555543 5321 11568899999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEecCch
Q 007987 187 SDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~ 215 (582)
|......++. ...+++|+.|...+.+.
T Consensus 203 ps~~~~pvl~--~~~l~~G~~V~~vgs~~ 229 (350)
T 1x7d_A 203 ADKAYATIIT--PDMLEPGMHLNAVGGDC 229 (350)
T ss_dssp CCSSEEEEEC--GGGCCTTCEEEECSCCB
T ss_pred cCCCCCceec--HHHcCCCCEEEECCCCC
Confidence 9864222332 25688999887776543
No 153
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=98.03 E-value=7.1e-06 Score=82.63 Aligned_cols=86 Identities=13% Similarity=0.064 Sum_probs=63.6
Q ss_pred CEEEEEccchhHHH-HHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch
Q 007987 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (582)
Q Consensus 112 kkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~ 189 (582)
.+|||||+|.||.. ++.+|++. .+++++ +.+++..+..+.+.+.|+.. ..+.++++++.|+|++++|+.
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~~----~~~~~~ll~~~D~V~i~tp~~ 77 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKS-----ERFEFVGAFTPNKVKREKICSDYRIMP----FDSIESLAKKCDCIFLHSSTE 77 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSC-----SSSEEEEEECSCHHHHHHHHHHHTCCB----CSCHHHHHTTCSEEEECCCGG
T ss_pred CcEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHHhcCCEEEEeCCcH
Confidence 68999999999996 88888764 156665 44444444445566778763 678999999999999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEE
Q 007987 190 AQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
.+.++..... +.|+-|.
T Consensus 78 ~h~~~~~~al---~~gk~vl 94 (308)
T 3uuw_A 78 THYEIIKILL---NLGVHVY 94 (308)
T ss_dssp GHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHH---HCCCcEE
Confidence 9988776543 3455433
No 154
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.03 E-value=2.7e-05 Score=69.09 Aligned_cols=95 Identities=16% Similarity=0.052 Sum_probs=63.0
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhh----hccCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYET----ISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Ea----v~~ADIVILaVP 187 (582)
++|.|+|+|.+|.++++.|.+. |++|++.+++ +...+.+.+.|+....+...+.+.+ ++++|+||+++|
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~------g~~V~~id~~-~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAA------GKKVLAVDKS-KEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCeEEEEECC-HHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 7899999999999999999998 9988766654 4445666667764322223333221 468999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
+.......-.....+....++..+..
T Consensus 80 ~~~~n~~~~~~a~~~~~~~iia~~~~ 105 (141)
T 3llv_A 80 DDEFNLKILKALRSVSDVYAIVRVSS 105 (141)
T ss_dssp CHHHHHHHHHHHHHHCCCCEEEEESC
T ss_pred CHHHHHHHHHHHHHhCCceEEEEEcC
Confidence 76654444444433444455555543
No 155
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=98.03 E-value=1e-05 Score=82.23 Aligned_cols=84 Identities=20% Similarity=0.232 Sum_probs=62.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd 188 (582)
.+|||||+|.||..++.+|++. .+++++ +.++...+..+.+.+.|+. ..+.+++++ +.|+|++++|+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~D~V~i~tp~ 73 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGN-----ADARLVAVADAFPAAAEAIAGAYGCE-----VRTIDAIEAAADIDAVVICTPT 73 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCE-----ECCHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEECCCHHHHHHHHHHhhC-----CCcEEEEEECCCHHHHHHHHHHhCCC-----cCCHHHHhcCCCCCEEEEeCCc
Confidence 6899999999999999999875 156665 3444433444556666765 578999987 79999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEE
Q 007987 189 AAQADNYEKIFSCMKPNSIL 208 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL 208 (582)
..+.++..... +.|+-|
T Consensus 74 ~~h~~~~~~al---~~gk~v 90 (331)
T 4hkt_A 74 DTHADLIERFA---RAGKAI 90 (331)
T ss_dssp GGHHHHHHHHH---HTTCEE
T ss_pred hhHHHHHHHHH---HcCCcE
Confidence 99988776543 345543
No 156
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=98.03 E-value=1.1e-05 Score=83.00 Aligned_cols=87 Identities=10% Similarity=0.087 Sum_probs=63.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd 188 (582)
.+|||||+|.||..++.+|++. +.+++++ +.+++..+..+.+.+.|+.. ..+.+++++ +.|+|++++|+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp~ 85 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKH----ADRAELIDVCDIDPAALKAAVERTGARG----HASLTDMLAQTDADIVILTTPS 85 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHT----TTTEEEEEEECSSHHHHHHHHHHHCCEE----ESCHHHHHHHCCCSEEEECSCG
T ss_pred ceEEEEcCcHHHHHHHHHHHhC----CCCeEEEEEEcCCHHHHHHHHHHcCCce----eCCHHHHhcCCCCCEEEECCCc
Confidence 6899999999999999999874 1166655 33444334445566778764 678999987 79999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 007987 189 AAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
..+.++..... +.|+-|.
T Consensus 86 ~~h~~~~~~al---~~gk~v~ 103 (354)
T 3q2i_A 86 GLHPTQSIECS---EAGFHVM 103 (354)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHHH---HCCCCEE
Confidence 99988776543 3455443
No 157
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.02 E-value=2.1e-05 Score=71.43 Aligned_cols=102 Identities=15% Similarity=0.084 Sum_probs=64.4
Q ss_pred ccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHH-HcCceecCCCcCCH---Hhh-hcc
Q 007987 104 LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEENGTLGDI---YET-ISG 178 (582)
Q Consensus 104 ~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~-~~G~~~~d~t~~~~---~Ea-v~~ 178 (582)
.++...+ ++|.|||+|.+|..+++.|+.. |.+|++..++..+ .+.+. ..|.....+...+. .++ +.+
T Consensus 13 ~~~~~~~-~~v~IiG~G~iG~~la~~L~~~------g~~V~vid~~~~~-~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 13 MSKKQKS-KYIVIFGCGRLGSLIANLASSS------GHSVVVVDKNEYA-FHRLNSEFSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp ----CCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCGGG-GGGSCTTCCSEEEESCTTSHHHHHTTTGGG
T ss_pred hhcccCC-CcEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHH-HHHHHhcCCCcEEEecCCCHHHHHHcCccc
Confidence 3567778 9999999999999999999998 9888777665433 33343 45643211112222 223 678
Q ss_pred CCeEEEeccchhHHHHHHHHHhcCCCCc-EEEEecC
Q 007987 179 SDLVLLLISDAAQADNYEKIFSCMKPNS-ILGLSHG 213 (582)
Q Consensus 179 ADIVILaVPd~a~~~Vl~eI~~~Lk~Ga-iL~~a~G 213 (582)
+|+||+++|+......+..+...+.+.. ++..+.+
T Consensus 85 ad~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 85 ADMVFAFTNDDSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp CSEEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 9999999998776655555555443433 4444444
No 158
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=98.01 E-value=1.4e-05 Score=81.06 Aligned_cols=87 Identities=15% Similarity=0.123 Sum_probs=60.7
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhh-ccCCeEEEeccc
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISD 188 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav-~~ADIVILaVPd 188 (582)
|.+|||||+|.||..++.+|++. .+++++ +.+++..+..+.+.+.|... ...+.++++ ++.|+|++++|+
T Consensus 1 ~~~vgiiG~G~~g~~~~~~l~~~-----~~~~~~~v~d~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~D~V~i~tp~ 72 (325)
T 2ho3_A 1 MLKLGVIGTGAISHHFIEAAHTS-----GEYQLVAIYSRKLETAATFASRYQNIQ---LFDQLEVFFKSSFDLVYIASPN 72 (325)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHT-----TSEEEEEEECSSHHHHHHHGGGSSSCE---EESCHHHHHTSSCSEEEECSCG
T ss_pred CeEEEEEeCCHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCe---EeCCHHHHhCCCCCEEEEeCCh
Confidence 36899999999999999999875 145654 33333333334445556421 156889988 789999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEE
Q 007987 189 AAQADNYEKIFSCMKPNSIL 208 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL 208 (582)
..+.++.... ++.|+-|
T Consensus 73 ~~h~~~~~~a---l~~gk~V 89 (325)
T 2ho3_A 73 SLHFAQAKAA---LSAGKHV 89 (325)
T ss_dssp GGHHHHHHHH---HHTTCEE
T ss_pred HHHHHHHHHH---HHcCCcE
Confidence 9998877654 3456543
No 159
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.99 E-value=1.6e-05 Score=72.62 Aligned_cols=117 Identities=14% Similarity=0.103 Sum_probs=77.6
Q ss_pred CEEEEEcc----chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEecc
Q 007987 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~----GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVP 187 (582)
++|+|||. |++|..++++|++. |++|+ .... .+..+ .-.|... ..++.|+....|++++++|
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~------G~~v~-~vnp-~~~~~--~i~G~~~----~~sl~el~~~vDlavi~vp 79 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQ------GYRVL-PVNP-RFQGE--ELFGEEA----VASLLDLKEPVDILDVFRP 79 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT------TCEEE-EECG-GGTTS--EETTEEC----BSSGGGCCSCCSEEEECSC
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHC------CCEEE-EeCC-CcccC--cCCCEEe----cCCHHHCCCCCCEEEEEeC
Confidence 89999999 89999999999998 98743 3222 11000 1146664 5678888888999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhhHHHHH
Q 007987 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSVRRLY 248 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~vR~ly 248 (582)
++...++++++...- .+.+|..++.+.-...+. .-..+++++ .||+++-...++.
T Consensus 80 ~~~~~~v~~~~~~~g-i~~i~~~~g~~~~~~~~~---a~~~Gir~v--gpnc~g~~~~~~~ 134 (140)
T 1iuk_A 80 PSALMDHLPEVLALR-PGLVWLQSGIRHPEFEKA---LKEAGIPVV--ADRCLMVEHKRLF 134 (140)
T ss_dssp HHHHTTTHHHHHHHC-CSCEEECTTCCCHHHHHH---HHHTTCCEE--ESCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CCEEEEcCCcCHHHHHHH---HHHcCCEEE--cCCccceEChhhc
Confidence 999999998866532 234554443333221111 112366665 5999998866554
No 160
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.98 E-value=1.4e-05 Score=81.61 Aligned_cols=79 Identities=14% Similarity=0.171 Sum_probs=59.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd 188 (582)
.+|||||+|.||..++.+|++. .+++++ +.+++..+..+.+.+.|+.. ...+.++++. +.|+|++++|+
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRES-----AQAEVRGIASRRLENAQKMAKELAIPV---AYGSYEELCKDETIDIIYIPTYN 77 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHS-----SSEEEEEEBCSSSHHHHHHHHHTTCCC---CBSSHHHHHHCTTCSEEEECCCG
T ss_pred EEEEEECchHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHcCCCc---eeCCHHHHhcCCCCCEEEEcCCC
Confidence 5899999999999999999885 156665 33444444455566777731 2678999987 79999999999
Q ss_pred hhHHHHHHHH
Q 007987 189 AAQADNYEKI 198 (582)
Q Consensus 189 ~a~~~Vl~eI 198 (582)
..+.++....
T Consensus 78 ~~h~~~~~~a 87 (330)
T 3e9m_A 78 QGHYSAAKLA 87 (330)
T ss_dssp GGHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998877654
No 161
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.97 E-value=3.2e-05 Score=69.31 Aligned_cols=94 Identities=20% Similarity=0.270 Sum_probs=61.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHH---h-hhccCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---E-TISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~---E-av~~ADIVILaVP 187 (582)
++|.|||+|.+|..+++.|++. |++|++.+++ ....+.+.+.|+....+...+.+ + -+.++|+||+++|
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~~-~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLAS------DIPLVVIETS-RTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEESC-HHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCEEEECcCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 5799999999999999999998 9988766554 44566677778753222222322 2 2578999999999
Q ss_pred chhHHHHHHHHHhcCCCC-cEEEEec
Q 007987 188 DAAQADNYEKIFSCMKPN-SILGLSH 212 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~G-aiL~~a~ 212 (582)
+......+-.....+.++ .+|.-+.
T Consensus 81 ~~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 81 NGYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred ChHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 876654332223333333 3444443
No 162
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=97.96 E-value=1.5e-05 Score=81.60 Aligned_cols=86 Identities=19% Similarity=0.139 Sum_probs=62.3
Q ss_pred CEEEEEccchhHHHHHHHHH-HhhhhhcCCceEE-EEecCCcccHHHHHHcCc--eecCCCcCCHHhhhcc--CCeEEEe
Q 007987 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVK-VGLRKGSRSFAEARAAGF--TEENGTLGDIYETISG--SDLVLLL 185 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLr-ds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~--~~~d~t~~~~~Eav~~--ADIVILa 185 (582)
.+|||||+|.||..++.+|+ .. .+++++ +.+++..+..+.+.+.|+ .. ..+.++++++ .|+|+++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~-----~~~~l~av~d~~~~~~~~~~~~~g~~~~~----~~~~~~ll~~~~~D~V~i~ 73 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKL-----SGAEIVAVTDVNQEAAQKVVEQYQLNATV----YPNDDSLLADENVDAVLVT 73 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTC-----SSEEEEEEECSSHHHHHHHHHHTTCCCEE----ESSHHHHHHCTTCCEEEEC
T ss_pred EEEEEECccHHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCCee----eCCHHHHhcCCCCCEEEEC
Confidence 58999999999999999998 42 156655 334443444455667783 33 6789999876 8999999
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEE
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+|+..+.++.... ++.|+-|.
T Consensus 74 tp~~~h~~~~~~a---l~~Gk~vl 94 (344)
T 3mz0_A 74 SWGPAHESSVLKA---IKAQKYVF 94 (344)
T ss_dssp SCGGGHHHHHHHH---HHTTCEEE
T ss_pred CCchhHHHHHHHH---HHCCCcEE
Confidence 9999998877654 34565443
No 163
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.95 E-value=2.5e-05 Score=79.00 Aligned_cols=86 Identities=15% Similarity=0.166 Sum_probs=61.4
Q ss_pred CEEEEEccchhHHHH-HHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQ-AQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~Ai-A~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVP 187 (582)
.+|||||+|.||..+ +..|++. +++++ +.+++..+..+.+.+.|+.. ...+.+++++ +.|+|++++|
T Consensus 1 ~~vgiiG~G~~g~~~~~~~l~~~------~~~~vav~d~~~~~~~~~~~~~g~~~---~~~~~~~~l~~~~~D~V~i~tp 71 (332)
T 2glx_A 1 NRWGLIGASTIAREWVIGAIRAT------GGEVVSMMSTSAERGAAYATENGIGK---SVTSVEELVGDPDVDAVYVSTT 71 (332)
T ss_dssp CEEEEESCCHHHHHTHHHHHHHT------TCEEEEEECSCHHHHHHHHHHTTCSC---CBSCHHHHHTCTTCCEEEECSC
T ss_pred CeEEEEcccHHHHHhhhHHhhcC------CCeEEEEECCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 379999999999998 8888765 77765 34444334445566667631 2568889886 4999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 007987 188 DAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+..+.++.... |+.|+.|.
T Consensus 72 ~~~h~~~~~~a---l~~Gk~v~ 90 (332)
T 2glx_A 72 NELHREQTLAA---IRAGKHVL 90 (332)
T ss_dssp GGGHHHHHHHH---HHTTCEEE
T ss_pred hhHhHHHHHHH---HHCCCeEE
Confidence 99998777654 34566443
No 164
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.95 E-value=1.1e-05 Score=82.49 Aligned_cols=87 Identities=24% Similarity=0.250 Sum_probs=62.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd 188 (582)
.+|||||+|.||..++.+|++. .+++++ +.++...+..+.+.+.|+.. ...+.+++++ +.|+|++++|+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 74 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMI-----DDAILYAISDVREDRLREMKEKLGVEK---AYKDPHELIEDPNVDAVLVCSST 74 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGS-----TTEEEEEEECSCHHHHHHHHHHHTCSE---EESSHHHHHHCTTCCEEEECSCG
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHhCCCc---eeCCHHHHhcCCCCCEEEEcCCC
Confidence 5899999999999999999874 156655 33444334445566677631 1678999988 79999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 007987 189 AAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
..+.++..... +.|+-|.
T Consensus 75 ~~h~~~~~~al---~~gk~v~ 92 (344)
T 3ezy_A 75 NTHSELVIACA---KAKKHVF 92 (344)
T ss_dssp GGHHHHHHHHH---HTTCEEE
T ss_pred cchHHHHHHHH---hcCCeEE
Confidence 99988776543 3455443
No 165
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.95 E-value=1.1e-05 Score=83.21 Aligned_cols=90 Identities=16% Similarity=0.198 Sum_probs=66.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHH----cCceecCCCcCCHHhhhccCCeEEEec
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA----AGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~----~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
++|+|||+|.||.++++.|+.. .++ +|.+.+|+ +..+.+.+ .|+.. ..+ +.++++++||+||++|
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~-----~~~~~V~v~~r~--~a~~la~~l~~~~g~~~--~~~-~~~eav~~aDIVi~aT 191 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSAR-----FALEAILVHDPY--ASPEILERIGRRCGVPA--RMA-APADIAAQADIVVTAT 191 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----SCCCEEEEECTT--CCHHHHHHHHHHHTSCE--EEC-CHHHHHHHCSEEEECC
T ss_pred cEEEEECccHHHHHHHHHHHHh-----CCCcEEEEECCc--HHHHHHHHHHHhcCCeE--EEe-CHHHHHhhCCEEEEcc
Confidence 8999999999999999999874 033 67777776 55555543 46532 114 8999999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEecCch
Q 007987 187 SDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~ 215 (582)
|... .++. .+.+++|++|+....+.
T Consensus 192 ~s~~--pvl~--~~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 192 RSTT--PLFA--GQALRAGAFVGAIGSSL 216 (313)
T ss_dssp CCSS--CSSC--GGGCCTTCEEEECCCSS
T ss_pred CCCC--cccC--HHHcCCCcEEEECCCCC
Confidence 9752 2333 35689999988877664
No 166
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.93 E-value=2.5e-07 Score=92.65 Aligned_cols=116 Identities=12% Similarity=-0.025 Sum_probs=72.9
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
++| +|+|||.|.||.+++..|.+. |. +|.+.+|+.++..+.+.+.+... ..+..++++++|+||.+|
T Consensus 107 ~~~--~vliiGaGg~a~ai~~~L~~~------G~~~I~v~nR~~~ka~~la~~~~~~~----~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 107 VKE--PVVVVGAGGAARAVIYALLQM------GVKDIWVVNRTIERAKALDFPVKIFS----LDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CCS--SEEEECCSHHHHHHHHHHHHT------TCCCEEEEESCHHHHHTCCSSCEEEE----GGGHHHHHHTCSEEEECS
T ss_pred CCC--eEEEECcHHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHcccCC----HHHHHhhhcCCCEEEECC
Confidence 455 899999999999999999998 88 78888876433222222223221 456778889999999999
Q ss_pred cchhHHH--HHHHHHhcCCCCcEEEEe-cCchhhhhhcccccCCCCCcEEEeccCCChhh
Q 007987 187 SDAAQAD--NYEKIFSCMKPNSILGLS-HGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 187 Pd~a~~~--Vl~eI~~~Lk~GaiL~~a-~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
|.....+ .+. ...++++++|++. .+ ...+++. .-..+++ +++|+.+..+
T Consensus 175 p~gm~p~~~~i~--~~~l~~~~~V~Divy~-~T~ll~~---A~~~G~~--~~~~Gl~MLv 226 (253)
T 3u62_A 175 SVGMKGEELPVS--DDSLKNLSLVYDVIYF-DTPLVVK---ARKLGVK--HIIKGNLMFY 226 (253)
T ss_dssp STTTTSCCCSCC--HHHHTTCSEEEECSSS-CCHHHHH---HHHHTCS--EEECTHHHHH
T ss_pred CCCCCCCCCCCC--HHHhCcCCEEEEeeCC-CcHHHHH---HHHCCCc--EEECCHHHHH
Confidence 8643221 111 2335678887644 45 5444433 1112333 4677665555
No 167
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.91 E-value=1.1e-05 Score=86.38 Aligned_cols=97 Identities=19% Similarity=0.168 Sum_probs=71.0
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecC-------------CCc-----
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEEN-------------GTL----- 169 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d-------------~t~----- 169 (582)
+.+ .||+|||+|.+|...++.++.. |.+|++.+++..+ .+.+.+.|..... ++.
T Consensus 188 v~~-~kV~ViG~G~iG~~aa~~a~~l------Ga~V~v~D~~~~~-l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~ 259 (405)
T 4dio_A 188 VPA-AKIFVMGAGVAGLQAIATARRL------GAVVSATDVRPAA-KEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSG 259 (405)
T ss_dssp ECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSTTH-HHHHHHTTCEECCCCC-----------------C
T ss_pred cCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEcCCHHH-HHHHHHcCCceeecccccccccccccchhhhcch
Confidence 466 8999999999999999999988 9988877666443 5666767764200 011
Q ss_pred -------CCHHhhhccCCeEEEec--cchhHHHHH-HHHHhcCCCCcEEEEec
Q 007987 170 -------GDIYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (582)
Q Consensus 170 -------~~~~Eav~~ADIVILaV--Pd~a~~~Vl-~eI~~~Lk~GaiL~~a~ 212 (582)
.+++++++++|+||.++ |......++ ++....||+|++|++.+
T Consensus 260 ~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 260 EYQVKQAALVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 14678899999999875 543333333 57888999999999886
No 168
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.90 E-value=1.6e-05 Score=81.63 Aligned_cols=86 Identities=10% Similarity=0.129 Sum_probs=62.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhh--ccCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETI--SGSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav--~~ADIVILaVPd 188 (582)
.+|||||+|.||..++.+|++. .+++++ +.+++..+..+.+.+.|+.. ..+.++++ .+.|+|++++|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~~l~~~~~D~V~i~tp~ 76 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKS-----EKLKLVTCYSRTEDKREKFGKRYNCAG----DATMEALLAREDVEMVIITVPN 76 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEECSSHHHHHHHHHHHTCCC----CSSHHHHHHCSSCCEEEECSCT
T ss_pred ceEEEEccCHHHHHHHHHHHhC-----CCcEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEEeCCh
Confidence 5899999999999999999865 156655 33444334445566678764 67899998 569999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 007987 189 AAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
..+.++.... ++.|+-|.
T Consensus 77 ~~h~~~~~~a---l~~gk~vl 94 (354)
T 3db2_A 77 DKHAEVIEQC---ARSGKHIY 94 (354)
T ss_dssp TSHHHHHHHH---HHTTCEEE
T ss_pred HHHHHHHHHH---HHcCCEEE
Confidence 9998876653 33455443
No 169
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.90 E-value=2.3e-05 Score=80.36 Aligned_cols=93 Identities=22% Similarity=0.278 Sum_probs=59.3
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHH--HcC------ceecCCCcCCHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAG------FTEENGTLGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~--~~G------~~~~d~t~~~~~Eav~~ADI 181 (582)
+||+|||.|+||.+++..|... |+ +|++.+++..+....+. ..+ ... ...+ .+++++||+
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~------g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i---~~~d-~~~~~~aDv 70 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK------GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANI---YAGD-YADLKGSDV 70 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEE---EECC-GGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEE---EeCC-HHHhCCCCE
Confidence 5899999999999999999988 87 88776654332222221 111 111 0234 467899999
Q ss_pred EEEeccchh----------------HHHHHHHHHhcCCCCcEE-EEecCch
Q 007987 182 VLLLISDAA----------------QADNYEKIFSCMKPNSIL-GLSHGFL 215 (582)
Q Consensus 182 VILaVPd~a----------------~~~Vl~eI~~~Lk~GaiL-~~a~G~~ 215 (582)
||+++|... ..+++++|.++. |+.+| .++-+..
T Consensus 71 Viiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~ 120 (319)
T 1a5z_A 71 VIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVD 120 (319)
T ss_dssp EEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHH
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHH
Confidence 999999643 245566666664 55544 4444443
No 170
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.89 E-value=4.4e-05 Score=79.00 Aligned_cols=86 Identities=12% Similarity=0.144 Sum_probs=63.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccch
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd~ 189 (582)
.+|||||+|.||..++.+|++. .+++++...+.+....+.+.+.|+.. ..+.++++. +.|+|++++|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~-----~~~~l~av~d~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp~~ 76 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAA-----DNLEVHGVFDILAEKREAAAQKGLKI----YESYEAVLADEKVDAVLIATPND 76 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTS-----TTEEEEEEECSSHHHHHHHHTTTCCB----CSCHHHHHHCTTCCEEEECSCGG
T ss_pred CcEEEECcCHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHhcCCce----eCCHHHHhcCCCCCEEEEcCCcH
Confidence 5799999999999999999875 15666544444444455666778764 678999987 789999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEE
Q 007987 190 AQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
.+.++..... +.|+-|.
T Consensus 77 ~h~~~~~~al---~aGkhVl 93 (359)
T 3e18_A 77 SHKELAISAL---EAGKHVV 93 (359)
T ss_dssp GHHHHHHHHH---HTTCEEE
T ss_pred HHHHHHHHHH---HCCCCEE
Confidence 9988776543 4566443
No 171
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.87 E-value=3.7e-05 Score=67.15 Aligned_cols=99 Identities=12% Similarity=0.087 Sum_probs=59.4
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHH---hh-hccCCeEE
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLVL 183 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~---Ea-v~~ADIVI 183 (582)
+++ ++|.|+|+|.+|..+++.|++. |++|++.+++ ....+.+.+.|.....+...+.+ ++ +.++|+||
T Consensus 4 ~~~-~~v~I~G~G~iG~~~a~~l~~~------g~~v~~~d~~-~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 4 IKN-KQFAVIGLGRFGGSIVKELHRM------GHEVLAVDIN-EEKVNAYASYATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp --C-CSEEEECCSHHHHHHHHHHHHT------TCCCEEEESC-HHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CcC-CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 455 7899999999999999999998 8887766654 22233333345421111122322 22 67899999
Q ss_pred Eeccch-hHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 184 LLISDA-AQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 184 LaVPd~-a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
+++++. .....+......+.+..+|..+.+-
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~ 107 (144)
T 2hmt_A 76 VAIGANIQASTLTTLLLKELDIPNIWVKAQNY 107 (144)
T ss_dssp ECCCSCHHHHHHHHHHHHHTTCSEEEEECCSH
T ss_pred ECCCCchHHHHHHHHHHHHcCCCeEEEEeCCH
Confidence 999975 3322333333444555555555543
No 172
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.87 E-value=5.4e-05 Score=76.56 Aligned_cols=86 Identities=15% Similarity=0.166 Sum_probs=61.7
Q ss_pred CEEEEEccchhHHH-HHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch
Q 007987 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (582)
Q Consensus 112 kkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~ 189 (582)
.+|||||+|.||.. ++..|.+. .+++++ +.+++..+..+.+.+.|+.. ..+.+++..+.|+|++++|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~l~~~~D~V~i~tp~~ 76 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAA-----SDWTLQGAWSPTRAKALPICESWRIPY----ADSLSSLAASCDAVFVHSSTA 76 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSC-----SSEEEEEEECSSCTTHHHHHHHHTCCB----CSSHHHHHTTCSEEEECSCTT
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCc----cCcHHHhhcCCCEEEEeCCch
Confidence 58999999999996 88888763 156665 45555545455566667653 567777667899999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEE
Q 007987 190 AQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
.+.++.... ++.|+-|.
T Consensus 77 ~h~~~~~~a---l~~G~~v~ 93 (319)
T 1tlt_A 77 SHFDVVSTL---LNAGVHVC 93 (319)
T ss_dssp HHHHHHHHH---HHTTCEEE
T ss_pred hHHHHHHHH---HHcCCeEE
Confidence 988777654 34566443
No 173
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.86 E-value=7.6e-05 Score=69.20 Aligned_cols=93 Identities=15% Similarity=0.091 Sum_probs=59.8
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCC---HHhh--hccCC
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET--ISGSD 180 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~---~~Ea--v~~AD 180 (582)
..+.+ ++|.|||+|.+|..+++.|++. .|++|++.+++ ....+.+.+.|+....+...+ +.++ +.++|
T Consensus 35 ~~~~~-~~v~IiG~G~~G~~~a~~L~~~-----~g~~V~vid~~-~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad 107 (183)
T 3c85_A 35 INPGH-AQVLILGMGRIGTGAYDELRAR-----YGKISLGIEIR-EEAAQQHRSEGRNVISGDATDPDFWERILDTGHVK 107 (183)
T ss_dssp BCCTT-CSEEEECCSHHHHHHHHHHHHH-----HCSCEEEEESC-HHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCC
T ss_pred cCCCC-CcEEEECCCHHHHHHHHHHHhc-----cCCeEEEEECC-HHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCC
Confidence 34567 8999999999999999999863 05677766654 344566667776421111223 2344 67899
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCC
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPN 205 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~G 205 (582)
+||+++|+......+-.....+.++
T Consensus 108 ~vi~~~~~~~~~~~~~~~~~~~~~~ 132 (183)
T 3c85_A 108 LVLLAMPHHQGNQTALEQLQRRNYK 132 (183)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCC
T ss_pred EEEEeCCChHHHHHHHHHHHHHCCC
Confidence 9999999866543333333334433
No 174
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.85 E-value=4.2e-05 Score=77.86 Aligned_cols=86 Identities=13% Similarity=0.139 Sum_probs=60.8
Q ss_pred CEEEEEccchhHHHHHHHHH-HhhhhhcCCceEEEE-ecCCcccHHHHHHcCc-eecCCCcCCHHhhhc--cCCeEEEec
Q 007987 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVG-LRKGSRSFAEARAAGF-TEENGTLGDIYETIS--GSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLr-ds~~~~g~G~~ViVg-~r~~sks~~~A~~~G~-~~~d~t~~~~~Eav~--~ADIVILaV 186 (582)
.+|||||+|.||..++..|+ .. .+++++.. +++..+..+.+.+.|+ .. ..+.+++++ +.|+|++++
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~-----~~~~~vav~d~~~~~~~~~a~~~g~~~~----~~~~~~~l~~~~~D~V~i~t 79 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKI-----QGVKLVAACALDSNQLEWAKNELGVETT----YTNYKDMIDTENIDAIFIVA 79 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTC-----SSEEEEEEECSCHHHHHHHHHTTCCSEE----ESCHHHHHTTSCCSEEEECS
T ss_pred ceEEEEcCCHHHHHHHHHHHhcC-----CCcEEEEEecCCHHHHHHHHHHhCCCcc----cCCHHHHhcCCCCCEEEEeC
Confidence 68999999999999999998 43 16665433 3333333344556676 32 568888886 699999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEE
Q 007987 187 SDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
|+..+.++.... |+.|+.|.
T Consensus 80 p~~~h~~~~~~a---l~~G~~v~ 99 (346)
T 3cea_A 80 PTPFHPEMTIYA---MNAGLNVF 99 (346)
T ss_dssp CGGGHHHHHHHH---HHTTCEEE
T ss_pred ChHhHHHHHHHH---HHCCCEEE
Confidence 999998777654 34566444
No 175
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.82 E-value=0.0001 Score=62.19 Aligned_cols=92 Identities=17% Similarity=0.059 Sum_probs=61.5
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCC-ceEEEEecCCcccHHHHHHcCceecCCCcCC---HHhhhccCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G-~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~---~~Eav~~ADIVILaVP 187 (582)
++|+|||.|.||.++++.|.+. | ++|++..++. ...+.....|+........+ ..++++++|+||.++|
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~------g~~~v~~~~r~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTS------SNYSVTVADHDL-AALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC------SSEEEEEEESCH-HHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCH-HHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCC
Confidence 7999999999999999999998 8 7877766653 33444444554321111222 4467789999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 188 DAAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
......+.+... +.|....+..+
T Consensus 79 ~~~~~~~~~~~~---~~g~~~~~~~~ 101 (118)
T 3ic5_A 79 FFLTPIIAKAAK---AAGAHYFDLTE 101 (118)
T ss_dssp GGGHHHHHHHHH---HTTCEEECCCS
T ss_pred chhhHHHHHHHH---HhCCCEEEecC
Confidence 887766666443 34554444443
No 176
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=97.81 E-value=5e-05 Score=78.53 Aligned_cols=86 Identities=21% Similarity=0.238 Sum_probs=62.9
Q ss_pred CEEEEEccchhHHHHHHHHH-HhhhhhcCCceEE-EEecCCcccHHHHHHcC--ceecCCCcCCHHhhhc--cCCeEEEe
Q 007987 112 NQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVK-VGLRKGSRSFAEARAAG--FTEENGTLGDIYETIS--GSDLVLLL 185 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLr-ds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G--~~~~d~t~~~~~Eav~--~ADIVILa 185 (582)
.+|||||+|.||..++.+|+ .. .+++++ +.++...+..+.+.+.| ... ..+.++++. +.|+|+++
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~~~-----~~~~lvav~d~~~~~~~~~a~~~g~~~~~----~~~~~~ll~~~~~D~V~i~ 94 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLANTV-----SGVEVVAVCDIVAGRAQAALDKYAIEAKD----YNDYHDLINDKDVEVVIIT 94 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTC-----TTEEEEEEECSSTTHHHHHHHHHTCCCEE----ESSHHHHHHCTTCCEEEEC
T ss_pred eeEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEeCCHHHHHHHHHHhCCCCee----eCCHHHHhcCCCCCEEEEc
Confidence 58999999999999999998 42 166655 44555455556677777 333 678999887 48999999
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEE
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+|+..+.++..... +.|+-|.
T Consensus 95 tp~~~h~~~~~~al---~aGk~Vl 115 (357)
T 3ec7_A 95 ASNEAHADVAVAAL---NANKYVF 115 (357)
T ss_dssp SCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcHHHHHHHHHHH---HCCCCEE
Confidence 99999988776543 3555443
No 177
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.80 E-value=0.0005 Score=74.35 Aligned_cols=190 Identities=12% Similarity=0.123 Sum_probs=109.4
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHH-------------------HHHHcC-ceecCCCcC
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFA-------------------EARAAG-FTEENGTLG 170 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~-------------------~A~~~G-~~~~d~t~~ 170 (582)
|.+|+|||+|-+|..+|..|.+. |++|+ |.+.+++..+ ++.+.| +.. ..
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~------G~~V~-g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~----tt 89 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALL------GHRVV-GYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSF----AE 89 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCEEE-EECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE----CS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC------CCcEE-EEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeE----Ec
Confidence 47999999999999999999998 99875 5555433222 222233 221 35
Q ss_pred CHHhhhccCCeEEEeccc----------hhHHHHHHHHHhcCC---CCcEEEEec----Cchh----hhhhcccccCCCC
Q 007987 171 DIYETISGSDLVLLLISD----------AAQADNYEKIFSCMK---PNSILGLSH----GFLL----GHLQSMGLDFPKN 229 (582)
Q Consensus 171 ~~~Eav~~ADIVILaVPd----------~a~~~Vl~eI~~~Lk---~GaiL~~a~----G~~i----~~~~~~~i~~p~d 229 (582)
+.+++++++|++|++||. .....+.+.|.++|+ +|++|++-+ |..- ..+++ . ..+
T Consensus 90 ~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~---~-~~~ 165 (444)
T 3vtf_A 90 SAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAE---E-AGG 165 (444)
T ss_dssp SHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHT---T-TTT
T ss_pred CHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHH---h-CCC
Confidence 788899999999999873 123456677888885 567776544 4431 12222 1 123
Q ss_pred CcE-EEecc--CCChhhHHHHHhhcccccCCCceEEEeeccCCCHHHHHHHHHHHHHhCCCccccccccccccccchhhh
Q 007987 230 IGV-IAVCP--KGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFTFATTLEQEYRSDIFGER 306 (582)
Q Consensus 230 v~V-I~v~P--ngpg~~vR~ly~~G~e~~G~Gv~aliAv~qd~tgeale~alala~aiG~~~~iettf~~E~~sDlfgEq 306 (582)
.++ +...| --||..++++..--+ .++.. .++++.+.+..+...+.... +.|+.. +-++-.
T Consensus 166 ~~f~v~~~PErl~eG~a~~d~~~~~r--------iViG~---~~~~a~~~~~~ly~~~~~~~-~~~~~~-~AE~~K---- 228 (444)
T 3vtf_A 166 VKFSVASNPEFLREGSALEDFFKPDR--------IVIGA---GDERAASFLLDVYKAVDAPK-LVMKPR-EAELVK---- 228 (444)
T ss_dssp CCCEEEECCCCCCTTSHHHHHHSCSC--------EEEEE---SSHHHHHHHHHHTTTSCSCE-EEECHH-HHHHHH----
T ss_pred CCceeecCcccccCCccccccccCCc--------EEEcC---CCHHHHHHHHHHHhccCCCE-EEechh-HHHHHH----
Confidence 333 44556 345666666554321 11221 24567777778877776542 222211 111111
Q ss_pred hhhchHHH----HHHHHHHHHHHcCCCHHH
Q 007987 307 ILLGAVHG----IVESLFRRFTENGMNEDL 332 (582)
Q Consensus 307 vLsG~~pA----lieAl~d~lVe~Gl~pe~ 332 (582)
.+.++.-+ |+..+....-+.|++..+
T Consensus 229 l~eN~~ravnIa~~NEla~ice~~GiDv~e 258 (444)
T 3vtf_A 229 YASNVFLALKISFANEVGLLAKRLGVDTYR 258 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 33444444 466666666666776543
No 178
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=97.78 E-value=3.9e-05 Score=79.13 Aligned_cols=85 Identities=14% Similarity=0.141 Sum_probs=63.2
Q ss_pred CEEEEEccchhHH-HHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEecc
Q 007987 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~-AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVP 187 (582)
.+|||||+|.||. .++.+|++. .+++++ +.++...+..+.+.+.|+.. +.+.+|+++ +.|+|++++|
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~~ll~~~~~D~V~i~tp 98 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEAE-----PLTEVTAIASRRWDRAKRFTERFGGEP----VEGYPALLERDDVDAVYVPLP 98 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHHC-----TTEEEEEEEESSHHHHHHHHHHHCSEE----EESHHHHHTCTTCSEEEECCC
T ss_pred eEEEEEcCcHHHHHHHHHHHHhC-----CCeEEEEEEcCCHHHHHHHHHHcCCCC----cCCHHHHhcCCCCCEEEECCC
Confidence 6899999999998 799999875 156654 44444444455666778875 578999886 5899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEE
Q 007987 188 DAAQADNYEKIFSCMKPNSIL 208 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL 208 (582)
+..+.++..... +.|+-|
T Consensus 99 ~~~h~~~~~~al---~aGk~V 116 (350)
T 3rc1_A 99 AVLHAEWIDRAL---RAGKHV 116 (350)
T ss_dssp GGGHHHHHHHHH---HTTCEE
T ss_pred cHHHHHHHHHHH---HCCCcE
Confidence 999988776543 355544
No 179
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.78 E-value=8.1e-05 Score=71.18 Aligned_cols=95 Identities=13% Similarity=0.063 Sum_probs=62.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCC---HHhh-hccCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYET-ISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~---~~Ea-v~~ADIVILaVP 187 (582)
|+|.|||+|.+|..+++.|.+. |++|++.+++..+..+.+...|+..-.+...+ +.++ ++++|+||++++
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~------g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR------KYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT------TCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 5799999999999999999998 99887766654333333444565321222233 2233 678999999999
Q ss_pred chhHHHHHHHHHhcC-CCCcEEEEec
Q 007987 188 DAAQADNYEKIFSCM-KPNSILGLSH 212 (582)
Q Consensus 188 d~a~~~Vl~eI~~~L-k~GaiL~~a~ 212 (582)
++....++..++..+ ....+|.-+.
T Consensus 75 ~d~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 75 RDEVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEECCC
T ss_pred CcHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 987766666555443 3344555443
No 180
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.78 E-value=3.8e-05 Score=78.23 Aligned_cols=87 Identities=11% Similarity=0.093 Sum_probs=60.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd 188 (582)
.+|||||+|.||..++.+|+.. .+++++ +.+++..+..+.+.+.|+.. ...+.++++. +.|+|++++|+
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~-----~~~~~~av~d~~~~~~~~~a~~~~~~~---~~~~~~~ll~~~~~D~V~i~tp~ 77 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLA-----GNGEVVAVSSRTLESAQAFANKYHLPK---AYDKLEDMLADESIDVIYVATIN 77 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHH-----CSEEEEEEECSCSSTTCC---CCCCSC---EESCHHHHHTCTTCCEEEECSCG
T ss_pred eEEEEEechHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 5899999999999999999876 144544 34444444445566667631 2578999987 78999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 007987 189 AAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
..+.++.... |+.|+-|.
T Consensus 78 ~~h~~~~~~a---l~aGk~Vl 95 (329)
T 3evn_A 78 QDHYKVAKAA---LLAGKHVL 95 (329)
T ss_dssp GGHHHHHHHH---HHTTCEEE
T ss_pred HHHHHHHHHH---HHCCCeEE
Confidence 9998877654 34565443
No 181
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.76 E-value=2.6e-05 Score=81.88 Aligned_cols=98 Identities=16% Similarity=0.093 Sum_probs=67.4
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-cCcee--cCCCcCCHHhhhccCCeEE
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTE--ENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-~G~~~--~d~t~~~~~Eav~~ADIVI 183 (582)
.+.| ++|+|||+|.+|.+.++.++.. |.+|++.+++. ...+.+.+ .|... ......+..++++++|+||
T Consensus 165 ~l~g-~~V~ViG~G~iG~~~a~~a~~~------Ga~V~~~d~~~-~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi 236 (377)
T 2vhw_A 165 GVEP-ADVVVIGAGTAGYNAARIANGM------GATVTVLDINI-DKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVI 236 (377)
T ss_dssp TBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCH-HHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCH-HHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEE
Confidence 5788 9999999999999999999988 98887666543 33444444 45421 0000124667888999999
Q ss_pred Eeccchh--HHHH-HHHHHhcCCCCcEEEEec
Q 007987 184 LLISDAA--QADN-YEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 184 LaVPd~a--~~~V-l~eI~~~Lk~GaiL~~a~ 212 (582)
.+++... ...+ .++..+.|++|.+|++.+
T Consensus 237 ~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 237 GAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp ECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred ECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 9885322 1122 356677899999888765
No 182
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.74 E-value=9.4e-05 Score=73.85 Aligned_cols=151 Identities=12% Similarity=0.081 Sum_probs=90.1
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
|+||+|+|+|.||..+++.+.+. +.+++...+.... ...|+.. ..++++++ ++|+||-.+.|..
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~------~~eLva~~d~~~~-----~~~gv~v----~~dl~~l~-~~DVvIDft~p~a 66 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK------GHEIVGVIENTPK-----ATTPYQQ----YQHIADVK-GADVAIDFSNPNL 66 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEECSSCC-------CCSCB----CSCTTTCT-TCSEEEECSCHHH
T ss_pred ceEEEEECcCHHHHHHHHHHHhC------CCEEEEEEecCcc-----ccCCCce----eCCHHHHh-CCCEEEEeCChHH
Confidence 47999999999999999999887 5454433443322 1467764 56778877 9999997777666
Q ss_pred HHHHHHHHHhcCCCCc-EEEEecCchhhhhhcccccCCCCCcEEEeccCCChhhH--HHHHhhcccccC-CCceEEEeec
Q 007987 191 QADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV--RRLYVQGKEING-AGINSSFAVH 266 (582)
Q Consensus 191 ~~~Vl~eI~~~Lk~Ga-iL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~v--R~ly~~G~e~~G-~Gv~aliAv~ 266 (582)
..+.++ ++.|. +|+-..|++-..++. ....-+.+++ ...||..--+. -++-+.-....+ .-+- ++-.|
T Consensus 67 ~~~~~~-----l~~g~~vVigTTG~s~e~~~~-l~~aa~~~~v-~~a~N~S~Gv~l~~~~~~~aa~~l~~~die-I~E~H 138 (243)
T 3qy9_A 67 LFPLLD-----EDFHLPLVVATTGEKEKLLNK-LDELSQNMPV-FFSANMSYGVHALTKILAAAVPLLDDFDIE-LTEAH 138 (243)
T ss_dssp HHHHHT-----SCCCCCEEECCCSSHHHHHHH-HHHHTTTSEE-EECSSCCHHHHHHHHHHHHHHHHTTTSEEE-EEEEE
T ss_pred HHHHHH-----HhcCCceEeCCCCCCHHHHHH-HHHHHhcCCE-EEECCccHHHHHHHHHHHHHHHhcCCCCEE-EEEcC
Confidence 555443 66666 455566886432221 1122345666 58899876551 111010000111 1122 23334
Q ss_pred c----C-CCHHHHHHHHHHHHHhCC
Q 007987 267 Q----D-VDGRATNVALGWSVALGS 286 (582)
Q Consensus 267 q----d-~tgeale~alala~aiG~ 286 (582)
. | +||.|+.+++.+ ++.|.
T Consensus 139 H~~K~DaPSGTA~~la~~i-~~~~~ 162 (243)
T 3qy9_A 139 HNKKVDAPSGTLEKLYDVI-VSLKE 162 (243)
T ss_dssp CTTCCSSSCHHHHHHHHHH-HHHST
T ss_pred CCCCCCCCCHHHHHHHHHH-HhcCc
Confidence 3 2 778999999888 88775
No 183
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.74 E-value=2.4e-05 Score=80.56 Aligned_cols=92 Identities=13% Similarity=0.014 Sum_probs=64.0
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcC---ceecCCCcCCHHhhhccCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG---FTEENGTLGDIYETISGSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G---~~~~d~t~~~~~Eav~~ADIVILaVPd 188 (582)
++|+|||+|.||.+++.+|+.. ....+|.+.+|+.++..+.+.+.+ +.. . +.+.++++ ++|+|+++||.
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~----~~~~~V~v~~r~~~~a~~la~~~~~~~~~~--~-~~~~~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRV----FDIGEVKAYDVREKAAKKFVSYCEDRGISA--S-VQPAEEAS-RCDVLVTTTPS 197 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH----SCCCEEEEECSSHHHHHHHHHHHHHTTCCE--E-ECCHHHHT-SSSEEEECCCC
T ss_pred CEEEEEcCcHHHHHHHHHHHHh----CCccEEEEECCCHHHHHHHHHHHHhcCceE--E-ECCHHHHh-CCCEEEEeeCC
Confidence 8999999999999999999874 002367777776555445554432 221 1 46788999 99999999997
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEecCch
Q 007987 189 AAQADNYEKIFSCMKPNSILGLSHGFL 215 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~~a~G~~ 215 (582)
.. .++. ...+++|+.|.+...+.
T Consensus 198 ~~--pv~~--~~~l~~G~~V~~ig~~~ 220 (322)
T 1omo_A 198 RK--PVVK--AEWVEEGTHINAIGADG 220 (322)
T ss_dssp SS--CCBC--GGGCCTTCEEEECSCCS
T ss_pred CC--ceec--HHHcCCCeEEEECCCCC
Confidence 53 2222 25688998887775553
No 184
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=97.74 E-value=3.5e-05 Score=81.85 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=68.7
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCc-----------------
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTL----------------- 169 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~----------------- 169 (582)
.+.| ++|+|||+|.+|.+.++.++.. |.+|++.+++. ...+.+.+.|.....-..
T Consensus 169 ~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~v~D~~~-~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~ 240 (401)
T 1x13_A 169 KVPP-AKVMVIGAGVAGLAAIGAANSL------GAIVRAFDTRP-EVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDA 240 (401)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCG-GGHHHHHHTTCEECCC--------CCHHHHHHSHH
T ss_pred CcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCCH-HHHHHHHHcCCEEEEecccccccccccchhhccHH
Confidence 4678 9999999999999999999988 88877766654 345566777765310000
Q ss_pred ------CCHHhhhccCCeEEEe--ccchhHHHHH-HHHHhcCCCCcEEEEec
Q 007987 170 ------GDIYETISGSDLVLLL--ISDAAQADNY-EKIFSCMKPNSILGLSH 212 (582)
Q Consensus 170 ------~~~~Eav~~ADIVILa--VPd~a~~~Vl-~eI~~~Lk~GaiL~~a~ 212 (582)
.++.++++++|+||.+ +|......++ ++....|++|.+|++.+
T Consensus 241 ~~~~~~~~l~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 241 FIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 0256788899999999 5422222333 45667799999988776
No 185
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.73 E-value=5e-05 Score=77.03 Aligned_cols=85 Identities=18% Similarity=0.121 Sum_probs=58.6
Q ss_pred CEEEEEccchhHH-HHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhh-ccCCeEEEeccch
Q 007987 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLLISDA 189 (582)
Q Consensus 112 kkIgIIG~GsmG~-AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav-~~ADIVILaVPd~ 189 (582)
.+|||||+|.||. +++.+|+.. .++++++.+++..+..+.+.+.|+.. ...+..+++ ++.|+|++++|+.
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~-----~~~~l~v~d~~~~~~~~~a~~~g~~~---~~~~~~~~l~~~~D~V~i~tp~~ 74 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQW-----PDIELVLCTRNPKVLGTLATRYRVSA---TCTDYRDVLQYGVDAVMIHAATD 74 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTS-----TTEEEEEECSCHHHHHHHHHHTTCCC---CCSSTTGGGGGCCSEEEECSCGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhC-----CCceEEEEeCCHHHHHHHHHHcCCCc---cccCHHHHhhcCCCEEEEECCch
Confidence 5899999999998 599998764 15676655554444445566677641 023444555 6899999999999
Q ss_pred hHHHHHHHHHhcCCCCcE
Q 007987 190 AQADNYEKIFSCMKPNSI 207 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~Gai 207 (582)
.+.++.... |+.|+-
T Consensus 75 ~h~~~~~~a---l~~Gk~ 89 (323)
T 1xea_A 75 VHSTLAAFF---LHLGIP 89 (323)
T ss_dssp GHHHHHHHH---HHTTCC
T ss_pred hHHHHHHHH---HHCCCe
Confidence 998877653 334553
No 186
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.73 E-value=8.8e-05 Score=75.64 Aligned_cols=93 Identities=20% Similarity=0.157 Sum_probs=59.9
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHH----H---c--CceecCCCcCCHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEAR----A---A--GFTEENGTLGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~----~---~--G~~~~d~t~~~~~Eav~~ADI 181 (582)
+||+|||.|+||.++|..|... |+ +|++.+++..+....+. . . ..... ...+. +++++||+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~------g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~--~t~d~-~a~~~aDi 75 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKD------NLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVI--GTDDY-ADISGSDV 75 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE--EESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEE--ECCCH-HHhCCCCE
Confidence 7899999999999999999998 87 87766665432222111 1 0 11110 02455 78899999
Q ss_pred EEEec--------------cc--hhHHHHHHHHHhcCCCCcEEE-EecCc
Q 007987 182 VLLLI--------------SD--AAQADNYEKIFSCMKPNSILG-LSHGF 214 (582)
Q Consensus 182 VILaV--------------Pd--~a~~~Vl~eI~~~Lk~GaiL~-~a~G~ 214 (582)
||+++ +. +...+++++|.++. ++++|+ .+.+.
T Consensus 76 Vi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~ 124 (317)
T 2ewd_A 76 VIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC-PNAFVICITNPL 124 (317)
T ss_dssp EEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSH
T ss_pred EEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChH
Confidence 99999 32 22356777777775 566554 44443
No 187
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.71 E-value=5.8e-05 Score=76.19 Aligned_cols=98 Identities=18% Similarity=0.165 Sum_probs=61.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHH--HcCceec-CCC--cCCHHhhhccCCeEEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAGFTEE-NGT--LGDIYETISGSDLVLL 184 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~--~~G~~~~-d~t--~~~~~Eav~~ADIVIL 184 (582)
+||+|||.|+||.++|..|... |+ +|++.+++..+....+. ..+.... +.. ..+..++++++|+||+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~------g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii 81 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQR------GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVI 81 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEE
Confidence 7999999999999999999988 87 88766554322211122 2333110 000 1112467889999999
Q ss_pred eccchhH----------------HHHHHHHHhcCCCCcEE-EEecCchh
Q 007987 185 LISDAAQ----------------ADNYEKIFSCMKPNSIL-GLSHGFLL 216 (582)
Q Consensus 185 aVPd~a~----------------~~Vl~eI~~~Lk~GaiL-~~a~G~~i 216 (582)
+++.... .+++++|.++ .++++| .+.-|+..
T Consensus 82 ~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 82 TAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDI 129 (319)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHH
Confidence 9953322 2566677775 566654 46667754
No 188
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=97.71 E-value=6.6e-05 Score=76.62 Aligned_cols=91 Identities=16% Similarity=0.222 Sum_probs=62.9
Q ss_pred ccCCCEEEEEccchhHHHH-HHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEE
Q 007987 108 FNGINQIGVIGWGSQGPAQ-AQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVL 183 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~Ai-A~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVI 183 (582)
++.|.||||||+|.||... +..+++. .+++++ |.+++..+..+.|++.|+.. ...|.+|+++ +.|+|+
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~~~~-----~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~iDaV~ 91 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAIQDA-----ENCVVTAIASRDLTRAREMADRFSVPH---AFGSYEEMLASDVIDAVY 91 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHC-----SSEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCSSCSEEE
T ss_pred ccCccEEEEEcChHHHHHHHHHHHHhC-----CCeEEEEEECCCHHHHHHHHHHcCCCe---eeCCHHHHhcCCCCCEEE
Confidence 4556799999999999865 5666654 145654 34444445566777888742 1578999885 479999
Q ss_pred EeccchhHHHHHHHHHhcCCCCcEEE
Q 007987 184 LLISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 184 LaVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
++||+..+.++....+ +.|+-|.
T Consensus 92 I~tP~~~H~~~~~~al---~aGkhVl 114 (350)
T 4had_A 92 IPLPTSQHIEWSIKAA---DAGKHVV 114 (350)
T ss_dssp ECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred EeCCCchhHHHHHHHH---hcCCEEE
Confidence 9999999988776543 3465443
No 189
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=97.67 E-value=0.00013 Score=75.26 Aligned_cols=90 Identities=14% Similarity=0.161 Sum_probs=61.9
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd 188 (582)
.+|||||+|.||..++..|... .+++++ +.+++..+..+.+.+.|+........+.+++++ +.|+|++++|+
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~-----~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~~~~ll~~~~~D~V~i~tp~ 81 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLA-----PNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPT 81 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHC-----TTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCG
T ss_pred eEEEEECchHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCCHHHHhcCCCCCEEEEcCCh
Confidence 6899999999999999999874 145554 334433344455666774100011568888886 58999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 007987 189 AAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
..+.++.... |+.|+-|.
T Consensus 82 ~~h~~~~~~a---l~aGk~V~ 99 (362)
T 1ydw_A 82 SLHVEWAIKA---AEKGKHIL 99 (362)
T ss_dssp GGHHHHHHHH---HTTTCEEE
T ss_pred HHHHHHHHHH---HHCCCeEE
Confidence 9998777653 45676544
No 190
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=97.66 E-value=7.3e-05 Score=78.48 Aligned_cols=98 Identities=13% Similarity=0.103 Sum_probs=68.5
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcC---------------C
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG---------------D 171 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~---------------~ 171 (582)
.+.| ++|+|||+|.+|.+.++.++.. |.+|++.+++.. ..+.+.+.|.....-... +
T Consensus 169 ~l~g-~~V~ViGaG~iG~~aa~~a~~~------Ga~V~~~d~~~~-~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s 240 (384)
T 1l7d_A 169 TVPP-ARVLVFGVGVAGLQAIATAKRL------GAVVMATDVRAA-TKEQVESLGGKFITVDDEAMKTAETAGGYAKEMG 240 (384)
T ss_dssp EECC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCST-THHHHHHTTCEECCC-------------------
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHH-HHHHHHHcCCeEEeecccccccccccccchhhcC
Confidence 4688 9999999999999999999988 888776666543 456666777643100000 0
Q ss_pred ----------HHhhhccCCeEEEec--cchhHHHHH-HHHHhcCCCCcEEEEec
Q 007987 172 ----------IYETISGSDLVLLLI--SDAAQADNY-EKIFSCMKPNSILGLSH 212 (582)
Q Consensus 172 ----------~~Eav~~ADIVILaV--Pd~a~~~Vl-~eI~~~Lk~GaiL~~a~ 212 (582)
..+.++++|+||.++ |......++ ++....|++|.+|++.+
T Consensus 241 ~~~~~~~~~~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva 294 (384)
T 1l7d_A 241 EEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLA 294 (384)
T ss_dssp ----CCHHHHHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETT
T ss_pred HHHHhhhHHHHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEe
Confidence 567788999999988 422122233 55667799999988775
No 191
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=97.65 E-value=8.9e-05 Score=78.44 Aligned_cols=74 Identities=23% Similarity=0.321 Sum_probs=58.0
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
+.| ++|+|||+|.||.++++.|+.. |. +|++.+|...+..+.+.+.|.... ...+..+++.++|+||.+|
T Consensus 165 l~g-~~VlIiGaG~iG~~~a~~l~~~------G~~~V~v~~r~~~ra~~la~~~g~~~~--~~~~l~~~l~~aDvVi~at 235 (404)
T 1gpj_A 165 LHD-KTVLVVGAGEMGKTVAKSLVDR------GVRAVLVANRTYERAVELARDLGGEAV--RFDELVDHLARSDVVVSAT 235 (404)
T ss_dssp CTT-CEEEEESCCHHHHHHHHHHHHH------CCSEEEEECSSHHHHHHHHHHHTCEEC--CGGGHHHHHHTCSEEEECC
T ss_pred ccC-CEEEEEChHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCcee--cHHhHHHHhcCCCEEEEcc
Confidence 688 9999999999999999999998 98 888777764444466777776520 1245678888999999999
Q ss_pred cchh
Q 007987 187 SDAA 190 (582)
Q Consensus 187 Pd~a 190 (582)
|...
T Consensus 236 ~~~~ 239 (404)
T 1gpj_A 236 AAPH 239 (404)
T ss_dssp SSSS
T ss_pred CCCC
Confidence 8554
No 192
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=97.64 E-value=6.9e-05 Score=76.34 Aligned_cols=89 Identities=13% Similarity=0.099 Sum_probs=62.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd 188 (582)
.+|||||+|.||..++.+|+.. . +.+++++ +.+++..+..+.+.+.|+.. ...+.++++. +.|+|++++|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~-~--~~~~~l~av~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~i~tp~ 76 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTL-P--RSEHQVVAVAARDLSRAKEFAQKHDIPK---AYGSYEELAKDPNVEVAYVGTQH 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-C--TTTEEEEEEECSSHHHHHHHHHHHTCSC---EESSHHHHHHCTTCCEEEECCCG
T ss_pred cEEEEECchHHHHHHHHHHHhC-C--CCCeEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEECCCc
Confidence 5899999999999999999864 0 0124443 33444344456667778731 1678999987 68999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEE
Q 007987 189 AAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
..+.++..+. |+.|+-|.
T Consensus 77 ~~H~~~~~~a---l~~GkhVl 94 (334)
T 3ohs_X 77 PQHKAAVMLC---LAAGKAVL 94 (334)
T ss_dssp GGHHHHHHHH---HHTTCEEE
T ss_pred HHHHHHHHHH---HhcCCEEE
Confidence 9998776654 34565443
No 193
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.62 E-value=3.9e-05 Score=77.58 Aligned_cols=84 Identities=12% Similarity=0.112 Sum_probs=56.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccch
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd~ 189 (582)
.+|||||+|.||..++.+|++. .+++++...+.+....+.+.+. +.. ..+.+++++ +.|+|++++|+.
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~-----~~~~~v~v~d~~~~~~~~~~~~-~~~----~~~~~~~l~~~~~D~V~i~tp~~ 80 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGL-----PGAALVRLASSNPDNLALVPPG-CVI----ESDWRSVVSAPEVEAVIIATPPA 80 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHC-----TTEEEEEEEESCHHHHTTCCTT-CEE----ESSTHHHHTCTTCCEEEEESCGG
T ss_pred ceEEEECCcHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHhh-Ccc----cCCHHHHhhCCCCCEEEEeCChH
Confidence 5899999999999999999875 1566543333322212111111 222 467888885 799999999999
Q ss_pred hHHHHHHHHHhcCCCCcEE
Q 007987 190 AQADNYEKIFSCMKPNSIL 208 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~GaiL 208 (582)
.+.++..+. ++.|+-|
T Consensus 81 ~h~~~~~~a---l~~Gk~v 96 (315)
T 3c1a_A 81 THAEITLAA---IASGKAV 96 (315)
T ss_dssp GHHHHHHHH---HHTTCEE
T ss_pred HHHHHHHHH---HHCCCcE
Confidence 998877654 3456543
No 194
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=97.62 E-value=8.8e-05 Score=81.05 Aligned_cols=92 Identities=20% Similarity=0.210 Sum_probs=71.3
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
.|.| |+++|+|+|.+|.++|+.|+.. |.+|++.+++ ......+...|+. +.+.+++++.+|+|+.++
T Consensus 262 ~L~G-KtVvVtGaGgIG~aiA~~Laa~------GA~Viv~D~~-~~~a~~Aa~~g~d-----v~~lee~~~~aDvVi~at 328 (488)
T 3ond_A 262 MIAG-KVAVVAGYGDVGKGCAAALKQA------GARVIVTEID-PICALQATMEGLQ-----VLTLEDVVSEADIFVTTT 328 (488)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSC-HHHHHHHHHTTCE-----ECCGGGTTTTCSEEEECS
T ss_pred cccC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCC-HHHHHHHHHhCCc-----cCCHHHHHHhcCEEEeCC
Confidence 4789 9999999999999999999998 9988776554 3335566677876 467889999999999887
Q ss_pred cchhHHHHH-HHHHhcCCCCcEEEEecCc
Q 007987 187 SDAAQADNY-EKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 187 Pd~a~~~Vl-~eI~~~Lk~GaiL~~a~G~ 214 (582)
.... ++ .+....|+++.+|+.++.+
T Consensus 329 G~~~---vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 329 GNKD---IIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp SCSC---SBCHHHHTTSCTTEEEEESSST
T ss_pred CChh---hhhHHHHHhcCCCeEEEEcCCC
Confidence 6432 23 3467789999988766543
No 195
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=97.62 E-value=9.3e-06 Score=82.49 Aligned_cols=94 Identities=13% Similarity=0.111 Sum_probs=60.6
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
.++| +++.|||.|.+|.+++..|.+. |. +|++.+|+.++..+.+. ++.. ....+..++++++|+||.+
T Consensus 114 ~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~--~~~~--~~~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 114 GIED-AYILILGAGGASKGIANELYKI------VRPTLTVANRTMSRFNNWSL--NINK--INLSHAESHLDEFDIIINT 182 (277)
T ss_dssp TGGG-CCEEEECCSHHHHHHHHHHHTT------CCSCCEEECSCGGGGTTCCS--CCEE--ECHHHHHHTGGGCSEEEEC
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHH--hccc--ccHhhHHHHhcCCCEEEEC
Confidence 4678 9999999999999999999998 88 78888887554333332 2221 0133456778899999999
Q ss_pred ccchhHHHHHHHH-HhcCCCCcEEEEe
Q 007987 186 ISDAAQADNYEKI-FSCMKPNSILGLS 211 (582)
Q Consensus 186 VPd~a~~~Vl~eI-~~~Lk~GaiL~~a 211 (582)
||......+-..+ ...++++.+|++.
T Consensus 183 Tp~Gm~~~~~~~l~~~~l~~~~~V~D~ 209 (277)
T 3don_A 183 TPAGMNGNTDSVISLNRLASHTLVSDI 209 (277)
T ss_dssp CC-------CCSSCCTTCCSSCEEEES
T ss_pred ccCCCCCCCcCCCCHHHcCCCCEEEEe
Confidence 9976443221001 2346677777655
No 196
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=97.57 E-value=6.3e-05 Score=77.11 Aligned_cols=84 Identities=11% Similarity=0.207 Sum_probs=57.1
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
.+|+|||+|+||..++.+|.+. .+++++ +.+++..+ +.+ .|+.. ..++++++.++|+|++++|+..
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~-----~~~elvav~d~~~~~--~~~--~gv~~----~~d~~~ll~~~DvViiatp~~~ 70 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQ-----PDMDLVGIFSRRATL--DTK--TPVFD----VADVDKHADDVDVLFLCMGSAT 70 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-----SSEEEEEEEESSSCC--SSS--SCEEE----GGGGGGTTTTCSEEEECSCTTT
T ss_pred CEEEEEeecHHHHHHHHHHhcC-----CCCEEEEEEcCCHHH--hhc--CCCce----eCCHHHHhcCCCEEEEcCCcHH
Confidence 5899999999999999999875 145554 33443222 222 46543 4567777788999999999987
Q ss_pred HHHHHHHHHhcCCCCcEEEEe
Q 007987 191 QADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 191 ~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+.+.+. ..++.|+.|++.
T Consensus 71 h~~~~~---~al~aG~~Vv~e 88 (320)
T 1f06_A 71 DIPEQA---PKFAQFACTVDT 88 (320)
T ss_dssp HHHHHH---HHHTTTSEEECC
T ss_pred HHHHHH---HHHHCCCEEEEC
Confidence 755443 445567755544
No 197
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.57 E-value=0.00043 Score=62.48 Aligned_cols=97 Identities=12% Similarity=-0.003 Sum_probs=62.0
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccH---HHHHHcCceecCCCcCC---HHhh-hccCCeEEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEARAAGFTEENGTLGD---IYET-ISGSDLVLL 184 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~---~~A~~~G~~~~d~t~~~---~~Ea-v~~ADIVIL 184 (582)
++|.|+|+|.+|..+++.|.+. |++|++..++..... ......|+....+...+ +.++ ++++|+||+
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~------g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR------GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT------TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 6899999999999999999998 988877766432212 22223354321122233 2344 789999999
Q ss_pred eccchhHHHHHHHHHhcCCC-CcEEEEecCc
Q 007987 185 LISDAAQADNYEKIFSCMKP-NSILGLSHGF 214 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~-GaiL~~a~G~ 214 (582)
++++......+..+...+.+ ..++..+.+-
T Consensus 78 ~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~ 108 (153)
T 1id1_A 78 LSDNDADNAFVVLSAKDMSSDVKTVLAVSDS 108 (153)
T ss_dssp CSSCHHHHHHHHHHHHHHTSSSCEEEECSSG
T ss_pred ecCChHHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 99988665555444444433 3455555543
No 198
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.55 E-value=0.00016 Score=73.72 Aligned_cols=93 Identities=20% Similarity=0.212 Sum_probs=56.9
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHHc--Cc------eecCCCcCCHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA--GF------TEENGTLGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~~--G~------~~~d~t~~~~~Eav~~ADI 181 (582)
+||+|||.|++|.++|..|... |+ +|++.+++..+....+.+. +. .. +..+ .+++++||+
T Consensus 1 mkI~VIGaG~vG~~la~~la~~------g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i---~~~~-~~a~~~aDv 70 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR------GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRV---WHGG-HSELADAQV 70 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEE---EEEC-GGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEE---EECC-HHHhCCCCE
Confidence 5899999999999999999888 77 7766655432222223221 11 11 0123 467899999
Q ss_pred EEEeccchhH----------------HHHHHHHHhcCCCCcEEEE-ecCch
Q 007987 182 VLLLISDAAQ----------------ADNYEKIFSCMKPNSILGL-SHGFL 215 (582)
Q Consensus 182 VILaVPd~a~----------------~~Vl~eI~~~Lk~GaiL~~-a~G~~ 215 (582)
||++++.... .+++++|.++ .|+++|+. +-+..
T Consensus 71 VIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~~ 120 (304)
T 2v6b_A 71 VILTAGANQKPGESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPVD 120 (304)
T ss_dssp EEECC------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSHH
T ss_pred EEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCchH
Confidence 9999954321 4455566666 46766543 44443
No 199
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=97.55 E-value=0.00049 Score=70.01 Aligned_cols=84 Identities=12% Similarity=0.043 Sum_probs=61.4
Q ss_pred CEEEEEccchhHH-HHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcC-ceecCCCcCCHHhhhc--cCCeEEEec
Q 007987 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAG-FTEENGTLGDIYETIS--GSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~-AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G-~~~~d~t~~~~~Eav~--~ADIVILaV 186 (582)
.+|||||+|.+|. .++.+|+.. +++++ |.+++..+..+.+.+.| ... ..+.+++++ +.|+|++++
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l~~~------~~~lvav~d~~~~~~~~~a~~~~~~~~----~~~~~~ll~~~~~D~V~i~t 74 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQLIDA------GAELAGVFESDSDNRAKFTSLFPSVPF----AASAEQLITDASIDLIACAV 74 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHHHHT------TCEEEEEECSCTTSCHHHHHHSTTCCB----CSCHHHHHTCTTCCEEEECS
T ss_pred cEEEEECCChHHHHHhhhhhcCC------CcEEEEEeCCCHHHHHHHHHhcCCCcc----cCCHHHHhhCCCCCEEEEeC
Confidence 5899999999996 678888655 77754 45555556666677774 332 678999886 689999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEE
Q 007987 187 SDAAQADNYEKIFSCMKPNSIL 208 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL 208 (582)
|+..+.++.... |+.|+-|
T Consensus 75 p~~~h~~~~~~a---l~aGkhV 93 (336)
T 2p2s_A 75 IPCDRAELALRT---LDAGKDF 93 (336)
T ss_dssp CGGGHHHHHHHH---HHTTCEE
T ss_pred ChhhHHHHHHHH---HHCCCcE
Confidence 999997766643 3456643
No 200
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=97.54 E-value=0.0001 Score=76.93 Aligned_cols=86 Identities=12% Similarity=0.132 Sum_probs=62.7
Q ss_pred CEEEEEccc-hhHHHHHHHHHHhhhhhcCCceEEEEec-CCcccHHHHHHcCceecCCCcCCHHhhhcc--CCeEEEecc
Q 007987 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~G-smG~AiA~nLrds~~~~g~G~~ViVg~r-~~sks~~~A~~~G~~~~d~t~~~~~Eav~~--ADIVILaVP 187 (582)
.+|||||+| .||..++.+|+.. .+++++...+ ...+..+.+.+.|+.. ..+.+|++++ .|+|++++|
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~g~~~----~~~~~ell~~~~vD~V~i~tp 73 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHH-----PDAQIVAACDPNEDVRERFGKEYGIPV----FATLAEMMQHVQMDAVYIASP 73 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHC-----TTEEEEEEECSCHHHHHHHHHHHTCCE----ESSHHHHHHHSCCSEEEECSC
T ss_pred eEEEEEeCCHHHHHHHHHHHHhC-----CCeEEEEEEeCCHHHHHHHHHHcCCCe----ECCHHHHHcCCCCCEEEEcCC
Confidence 589999999 9999999999875 1566553333 3334445566778764 6789999874 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 007987 188 DAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+..+.++..... +.|+-|.
T Consensus 74 ~~~H~~~~~~al---~aGk~Vl 92 (387)
T 3moi_A 74 HQFHCEHVVQAS---EQGLHII 92 (387)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred cHHHHHHHHHHH---HCCCcee
Confidence 999987776543 3455443
No 201
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.52 E-value=0.00023 Score=72.40 Aligned_cols=86 Identities=17% Similarity=0.190 Sum_probs=55.5
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchhH
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a~ 191 (582)
.+|||||+|+||..++..|++. .+++++...+.+... +++.|+.. ....++.+. .+.|+|++++|+..+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~-----~~~elvav~d~~~~~---~~~~g~~~--~~~~~l~~~-~~~DvViiatp~~~h 78 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREA-----PDFEIAGIVRRNPAE---VPFELQPF--RVVSDIEQL-ESVDVALVCSPSREV 78 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC-----TTEEEEEEECC----------CCTTS--CEESSGGGS-SSCCEEEECSCHHHH
T ss_pred CEEEEECChHHHHHHHHHHhcC-----CCCEEEEEEcCCHHH---HHHcCCCc--CCHHHHHhC-CCCCEEEECCCchhh
Confidence 5899999999999999999874 156765333333222 22256531 113445444 789999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEe
Q 007987 192 ADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 192 ~~Vl~eI~~~Lk~GaiL~~a 211 (582)
.++.... ++.|+.|++.
T Consensus 79 ~~~~~~a---l~aG~~Vi~e 95 (304)
T 3bio_A 79 ERTALEI---LKKGICTADS 95 (304)
T ss_dssp HHHHHHH---HTTTCEEEEC
T ss_pred HHHHHHH---HHcCCeEEEC
Confidence 7776644 4557766554
No 202
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=97.51 E-value=0.00022 Score=74.74 Aligned_cols=89 Identities=11% Similarity=0.031 Sum_probs=63.8
Q ss_pred CEEEEEccch---hHHHHHHHHHHhhhhhcCCceEEE--EecCCcccHHHHHHcCceecCCCcCCHHhhhcc-------C
Q 007987 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSDIVVKV--GLRKGSRSFAEARAAGFTEENGTLGDIYETISG-------S 179 (582)
Q Consensus 112 kkIgIIG~Gs---mG~AiA~nLrds~~~~g~G~~ViV--g~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~-------A 179 (582)
.+|||||+|. ||..++.+++.. .+++++. .++...+..+.+.+.|+.. .....+.++++++ .
T Consensus 13 ~rvgiiG~G~~~~ig~~h~~~~~~~-----~~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~v 86 (398)
T 3dty_A 13 IRWAMVGGGSQSQIGYIHRCAALRD-----NTFVLVAGAFDIDPIRGSAFGEQLGVDS-ERCYADYLSMFEQEARRADGI 86 (398)
T ss_dssp EEEEEEECCTTCSSHHHHHHHHHGG-----GSEEEEEEECCSSHHHHHHHHHHTTCCG-GGBCSSHHHHHHHHTTCTTCC
T ss_pred ceEEEEcCCccchhHHHHHHHHhhC-----CCeEEEEEEeCCCHHHHHHHHHHhCCCc-ceeeCCHHHHHhcccccCCCC
Confidence 5899999999 999999998876 0356653 2444445556677788831 1126789998865 8
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCCcEEE
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
|+|++++|+..+.++....+ +.|+-|.
T Consensus 87 D~V~i~tp~~~H~~~~~~al---~aGkhVl 113 (398)
T 3dty_A 87 QAVSIATPNGTHYSITKAAL---EAGLHVV 113 (398)
T ss_dssp SEEEEESCGGGHHHHHHHHH---HTTCEEE
T ss_pred CEEEECCCcHHHHHHHHHHH---HCCCeEE
Confidence 99999999999988776543 3565443
No 203
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.50 E-value=5.8e-05 Score=79.10 Aligned_cols=92 Identities=15% Similarity=0.113 Sum_probs=62.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCC-CcCCHHhhhccCCeEEEeccchh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENG-TLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~-t~~~~~Eav~~ADIVILaVPd~a 190 (582)
++|+|||+|.||.+++..|.+. .+|.+++|+.++..+.+...+....|- ...+++++++++|+||.++|+..
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-------~~V~V~~R~~~~a~~la~~~~~~~~d~~~~~~l~~ll~~~DvVIn~~P~~~ 89 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGFL 89 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSCEEECCCHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-------CeEEEEECCHHHHHHHHhhCCeEEEecCCHHHHHHHHhCCCEEEECCChhh
Confidence 8999999999999999999764 467888876444333332222111010 01245678899999999999887
Q ss_pred HHHHHHHHHhcCCCCcEEEEecC
Q 007987 191 QADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 191 ~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
+..+.. ..++.|+.+++.+.
T Consensus 90 ~~~v~~---a~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 90 GFKSIK---AAIKSKVDMVDVSF 109 (365)
T ss_dssp HHHHHH---HHHHTTCCEEECCC
T ss_pred hHHHHH---HHHHhCCeEEEccC
Confidence 766554 34567877776553
No 204
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=97.50 E-value=0.00019 Score=73.33 Aligned_cols=98 Identities=17% Similarity=0.157 Sum_probs=61.9
Q ss_pred ccccCCC--EEEEEccchhHHHHHHHHHHhhh--hhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--c
Q 007987 106 DAFNGIN--QIGVIGWGSQGPAQAQNLRDSLA--EAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--G 178 (582)
Q Consensus 106 ~~l~gik--kIgIIG~GsmG~AiA~nLrds~~--~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ 178 (582)
..++.|| +|||||+|.||..++.+++.... ..-.+.+++ |.+++..+..+.+.+.|+.. ...|.+|+++ +
T Consensus 18 ~~~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~---~y~d~~ell~~~~ 94 (393)
T 4fb5_A 18 LYFQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEK---ATADWRALIADPE 94 (393)
T ss_dssp ------CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSE---EESCHHHHHHCTT
T ss_pred ccccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCe---ecCCHHHHhcCCC
Confidence 3455554 78999999999999888765300 000134543 34455556667788888742 1578999886 4
Q ss_pred CCeEEEeccchhHHHHHHHHHhcCCCCcEEE
Q 007987 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 179 ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
.|+|+++||+..+.++....+ +.|+-|.
T Consensus 95 iDaV~IatP~~~H~~~a~~al---~aGkhVl 122 (393)
T 4fb5_A 95 VDVVSVTTPNQFHAEMAIAAL---EAGKHVW 122 (393)
T ss_dssp CCEEEECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred CcEEEECCChHHHHHHHHHHH---hcCCeEE
Confidence 799999999999988776543 3566443
No 205
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.48 E-value=0.00012 Score=74.58 Aligned_cols=76 Identities=16% Similarity=0.160 Sum_probs=57.2
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCc---eecCCCcCCHHhhhccCCeE
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGF---TEENGTLGDIYETISGSDLV 182 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~---~~~d~t~~~~~Eav~~ADIV 182 (582)
.++| ++|.|||.|.||.+++..|.+. |. +|++.+|+.++..+.+.+.+. ... ...+..++++++|+|
T Consensus 138 ~l~~-~~vlVlGaGg~g~aia~~L~~~------G~~~V~v~nR~~~ka~~la~~~~~~~~~~~--~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDG-KRILVIGAGGGARGIYFSLLST------AAERIDMANRTVEKAERLVREGDERRSAYF--SLAEAETRLAEYDII 208 (297)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHTT------TCSEEEEECSSHHHHHHHHHHSCSSSCCEE--CHHHHHHTGGGCSEE
T ss_pred CCCC-CEEEEECcHHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHhhhccCcee--eHHHHHhhhccCCEE
Confidence 3678 9999999999999999999998 87 888888875555566655543 110 012456778899999
Q ss_pred EEeccchhH
Q 007987 183 LLLISDAAQ 191 (582)
Q Consensus 183 ILaVPd~a~ 191 (582)
|.++|....
T Consensus 209 In~t~~~~~ 217 (297)
T 2egg_A 209 INTTSVGMH 217 (297)
T ss_dssp EECSCTTCS
T ss_pred EECCCCCCC
Confidence 999997643
No 206
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.47 E-value=0.00054 Score=69.85 Aligned_cols=70 Identities=19% Similarity=0.096 Sum_probs=45.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHH--HcCc-------eecCCCcCCHHhhhccCCeE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR--AAGF-------TEENGTLGDIYETISGSDLV 182 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~--~~G~-------~~~d~t~~~~~Eav~~ADIV 182 (582)
+||+|||.|.||.++|..|... +.|.+|++.+++..+....+. ..+. .. ....+.++ +++||+|
T Consensus 1 mkI~VIGaG~vG~~la~~la~~----~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i--~~t~d~~~-l~~aDvV 73 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEK----QLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKV--TGSNDYAD-TANSDIV 73 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT----TCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEE--EEESCGGG-GTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC----CCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEE--EECCCHHH-HCCCCEE
Confidence 5899999999999999998875 226687766665433222221 1110 10 00245655 8999999
Q ss_pred EEeccc
Q 007987 183 LLLISD 188 (582)
Q Consensus 183 ILaVPd 188 (582)
|+++|.
T Consensus 74 iiav~~ 79 (310)
T 1guz_A 74 IITAGL 79 (310)
T ss_dssp EECCSC
T ss_pred EEeCCC
Confidence 999964
No 207
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.46 E-value=0.00016 Score=75.47 Aligned_cols=99 Identities=13% Similarity=0.077 Sum_probs=66.8
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-cCceec-C-CCcCCHHhhhccCCeE
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEE-N-GTLGDIYETISGSDLV 182 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-~G~~~~-d-~t~~~~~Eav~~ADIV 182 (582)
..+++ ++|+|||.|.+|.++++.++.. |.+|++.+++.. ..+.+.+ .|.... + ....+.+++++++|+|
T Consensus 162 ~~l~~-~~V~ViGaG~iG~~~a~~l~~~------Ga~V~~~d~~~~-~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvV 233 (369)
T 2eez_A 162 PGVAP-ASVVILGGGTVGTNAAKIALGM------GAQVTILDVNHK-RLQYLDDVFGGRVITLTATEANIKKSVQHADLL 233 (369)
T ss_dssp TBBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHH-HHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEE
T ss_pred CCCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEECCHH-HHHHHHHhcCceEEEecCCHHHHHHHHhCCCEE
Confidence 35788 9999999999999999999988 998877766533 3344443 443210 0 0112456788899999
Q ss_pred EEeccchh--HHH-HHHHHHhcCCCCcEEEEec
Q 007987 183 LLLISDAA--QAD-NYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 183 ILaVPd~a--~~~-Vl~eI~~~Lk~GaiL~~a~ 212 (582)
|.+++... ... +.++..+.|++|.+|++.+
T Consensus 234 i~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 234 IGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp EECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred EECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 99998543 112 2356778899988877665
No 208
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.44 E-value=0.00058 Score=70.44 Aligned_cols=88 Identities=19% Similarity=0.146 Sum_probs=56.3
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHH--c-------C--ceecCCCcCCHHhhhccC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA--A-------G--FTEENGTLGDIYETISGS 179 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~--~-------G--~~~~d~t~~~~~Eav~~A 179 (582)
+||+|||.|.||.++|..|... |+ +|++.+++..+....+.. . . +.. ..+. +++++|
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~------g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~----t~d~-~al~~a 83 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQK------DLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG----ENNY-EYLQNS 83 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE----ESCG-GGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE----CCCH-HHHCCC
Confidence 6899999999999999999988 87 866655543322211111 0 1 111 2456 789999
Q ss_pred CeEEEec--cc--------------hhHHHHHHHHHhcCCCCcEEEEe
Q 007987 180 DLVLLLI--SD--------------AAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 180 DIVILaV--Pd--------------~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
|+||+++ |. ....+++++|.++. |+.+|+++
T Consensus 84 D~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~ 130 (328)
T 2hjr_A 84 DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICI 130 (328)
T ss_dssp SEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred CEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 9999998 42 11344555666654 66665433
No 209
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.44 E-value=3.9e-05 Score=77.97 Aligned_cols=73 Identities=16% Similarity=0.138 Sum_probs=56.1
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcC----ceecCCCcCCHHhhhccCCe
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG----FTEENGTLGDIYETISGSDL 181 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G----~~~~d~t~~~~~Eav~~ADI 181 (582)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.+ +. ..+.+++.+++|+
T Consensus 123 ~l~~-k~vlvlGaGg~g~aia~~L~~~------G~~~v~v~~R~~~~a~~la~~~~~~~~~~-----~~~~~~l~~~aDi 190 (281)
T 3o8q_A 123 LLKG-ATILLIGAGGAARGVLKPLLDQ------QPASITVTNRTFAKAEQLAELVAAYGEVK-----AQAFEQLKQSYDV 190 (281)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHTT------CCSEEEEEESSHHHHHHHHHHHGGGSCEE-----EEEGGGCCSCEEE
T ss_pred CccC-CEEEEECchHHHHHHHHHHHhc------CCCeEEEEECCHHHHHHHHHHhhccCCee-----EeeHHHhcCCCCE
Confidence 4678 9999999999999999999998 96 88888887655555555443 22 2345566688999
Q ss_pred EEEeccchhH
Q 007987 182 VLLLISDAAQ 191 (582)
Q Consensus 182 VILaVPd~a~ 191 (582)
||.+||....
T Consensus 191 IInaTp~gm~ 200 (281)
T 3o8q_A 191 IINSTSASLD 200 (281)
T ss_dssp EEECSCCCC-
T ss_pred EEEcCcCCCC
Confidence 9999998764
No 210
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=97.41 E-value=0.00018 Score=73.53 Aligned_cols=117 Identities=13% Similarity=0.247 Sum_probs=77.7
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccc
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd 188 (582)
.+|+|+|+ |.||..++++|++. |++++....+.... + .-.|+.. ..+++|+.+ ..|++++++|+
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l~~~------g~~~V~~VnP~~~g-~--~i~G~~v----y~sl~el~~~~~~Dv~ii~vp~ 80 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKMLEC------GTKIVGGVTPGKGG-Q--NVHGVPV----FDTVKEAVKETDANASVIFVPA 80 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCEEEEECTTCTT-C--EETTEEE----ESSHHHHHHHHCCCEEEECCCH
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCeEEEEeCCCCCC-c--eECCEee----eCCHHHHhhcCCCCEEEEccCH
Confidence 45788898 99999999999988 88754455432110 0 1257765 678899888 89999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhh
Q 007987 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
....+++++.... ....+|+++.||.....++ ....-+...+..+.||++|-.
T Consensus 81 ~~~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~-l~~~A~~~gi~viGPNc~Gii 133 (294)
T 2yv1_A 81 PFAKDAVFEAIDA-GIELIVVITEHIPVHDTME-FVNYAEDVGVKIIGPNTPGIA 133 (294)
T ss_dssp HHHHHHHHHHHHT-TCSEEEECCSCCCHHHHHH-HHHHHHHHTCEEECSSCCEEE
T ss_pred HHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEcCCCceee
Confidence 9999999886553 2333667888996432111 001111223344568888766
No 211
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=97.38 E-value=0.00035 Score=73.91 Aligned_cols=88 Identities=16% Similarity=0.177 Sum_probs=62.7
Q ss_pred CEEEEEccch---hHHHHHHHHHHhhhhhcCC-ceEEE--EecCCcccHHHHHHcCceecCCCcCCHHhhhcc-------
Q 007987 112 NQIGVIGWGS---QGPAQAQNLRDSLAEAKSD-IVVKV--GLRKGSRSFAEARAAGFTEENGTLGDIYETISG------- 178 (582)
Q Consensus 112 kkIgIIG~Gs---mG~AiA~nLrds~~~~g~G-~~ViV--g~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~------- 178 (582)
.+|||||+|. ||..++..++.. + ++++. .++...+..+.+++.|+.. .....+.++++++
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~------~~~~lva~v~d~~~~~a~~~a~~~g~~~-~~~~~~~~~ll~~~~~~~~~ 110 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLD------DHYELVAGALSSTPEKAEASGRELGLDP-SRVYSDFKEMAIREAKLKNG 110 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHT------SCEEEEEEECCSSHHHHHHHHHHHTCCG-GGBCSCHHHHHHHHHHCTTC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhC------CCcEEEEEEeCCCHHHHHHHHHHcCCCc-ccccCCHHHHHhcccccCCC
Confidence 5899999999 999999998876 4 56543 3344445556677788741 1126789998876
Q ss_pred CCeEEEeccchhHHHHHHHHHhcCCCCcEEE
Q 007987 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 179 ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
.|+|++++|+..+.++.... |+.|+-|.
T Consensus 111 vD~V~I~tp~~~H~~~~~~a---l~aGkhVl 138 (417)
T 3v5n_A 111 IEAVAIVTPNHVHYAAAKEF---LKRGIHVI 138 (417)
T ss_dssp CSEEEECSCTTSHHHHHHHH---HTTTCEEE
T ss_pred CcEEEECCCcHHHHHHHHHH---HhCCCeEE
Confidence 89999999999997776654 45576544
No 212
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.38 E-value=0.00073 Score=69.81 Aligned_cols=69 Identities=13% Similarity=0.043 Sum_probs=46.1
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHH-------cCceecCCCcCCHHhhhccCCeEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARA-------AGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~-------~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
+||+|||.|.+|.++|..|... |+ +|++.+++..+....+.. .+....-....++++++++||+||
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~------g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi 83 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALR------ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVI 83 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEE
Confidence 6899999999999999999988 87 866655544322221111 111100000257777899999999
Q ss_pred Eec
Q 007987 184 LLI 186 (582)
Q Consensus 184 LaV 186 (582)
+++
T Consensus 84 ~a~ 86 (331)
T 1pzg_A 84 VTA 86 (331)
T ss_dssp ECC
T ss_pred Ecc
Confidence 998
No 213
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=97.38 E-value=0.00037 Score=71.06 Aligned_cols=91 Identities=19% Similarity=0.179 Sum_probs=61.3
Q ss_pred EEEEEccchhHHHHHHHHHHhhh--hhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEecc
Q 007987 113 QIGVIGWGSQGPAQAQNLRDSLA--EAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLIS 187 (582)
Q Consensus 113 kIgIIG~GsmG~AiA~nLrds~~--~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVP 187 (582)
+|||||+|.||..++.+++.... ....+.+++ |.+++..+..+.+.+.|+.. ...|.+++++ +.|+|+++||
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~---~~~d~~~ll~~~~iDaV~I~tP 84 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWST---TETDWRTLLERDDVQLVDVCTP 84 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESCHHHHTTCTTCSEEEECSC
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 68999999999999999887410 000012443 33444445556677788742 1578999885 4799999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 007987 188 DAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+..+.++....+ +.|+-|.
T Consensus 85 ~~~H~~~~~~al---~aGkhVl 103 (390)
T 4h3v_A 85 GDSHAEIAIAAL---EAGKHVL 103 (390)
T ss_dssp GGGHHHHHHHHH---HTTCEEE
T ss_pred hHHHHHHHHHHH---HcCCCce
Confidence 999988776543 3566543
No 214
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=97.37 E-value=0.00034 Score=74.47 Aligned_cols=89 Identities=9% Similarity=0.112 Sum_probs=60.4
Q ss_pred CEEEEEccchhHH-HHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecC-CCcCCHHhhhc--cCCeEEEec
Q 007987 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEEN-GTLGDIYETIS--GSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~-AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d-~t~~~~~Eav~--~ADIVILaV 186 (582)
.+|||||+|.||. .++.+|+.. .+++++ +.+++..+..+.+.+.|+...+ ....+.+++++ +.|+|++++
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~ll~~~~vD~V~iat 158 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGC-----QHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIIL 158 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-----SSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECS
T ss_pred eEEEEECCcHHHHHHHHHHHhhC-----CCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCCHHHHhcCCCCCEEEEcC
Confidence 6899999999997 899998764 145654 3344333434556666763100 01567888886 789999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEE
Q 007987 187 SDAAQADNYEKIFSCMKPNSIL 208 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL 208 (582)
|+..+.++.... |+.|+-|
T Consensus 159 p~~~h~~~~~~a---l~aGk~V 177 (433)
T 1h6d_A 159 PNSLHAEFAIRA---FKAGKHV 177 (433)
T ss_dssp CGGGHHHHHHHH---HHTTCEE
T ss_pred CchhHHHHHHHH---HHCCCcE
Confidence 999998877654 3456543
No 215
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=97.36 E-value=0.00028 Score=72.10 Aligned_cols=117 Identities=13% Similarity=0.248 Sum_probs=76.9
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc--c-CCeEEEecc
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--G-SDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~-ADIVILaVP 187 (582)
.+|+|+|+ |.||..++++|++. |++++....+.... + .-.|+.. ..+++|+.+ . .|++++++|
T Consensus 14 ~~vvV~Gasg~~G~~~~~~l~~~------g~~~v~~VnP~~~g-~--~i~G~~v----y~sl~el~~~~~~~DvaIi~vp 80 (297)
T 2yv2_A 14 TRVLVQGITGREGSFHAKAMLEY------GTKVVAGVTPGKGG-S--EVHGVPV----YDSVKEALAEHPEINTSIVFVP 80 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------TCEEEEEECTTCTT-C--EETTEEE----ESSHHHHHHHCTTCCEEEECCC
T ss_pred CEEEEECCCCCHHHHHHHHHHhC------CCcEEEEeCCCCCC-c--eECCEee----eCCHHHHhhcCCCCCEEEEecC
Confidence 45777798 99999999999998 88854455432110 0 1257765 578888876 5 999999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhh
Q 007987 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPS 243 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~ 243 (582)
+....+++++.... ....+|+++.||.....++ ....-+...+..+.||++|-.
T Consensus 81 ~~~~~~~v~ea~~~-Gi~~vVi~t~G~~~~~~~~-l~~~A~~~gi~viGPNc~Gii 134 (297)
T 2yv2_A 81 APFAPDAVYEAVDA-GIRLVVVITEGIPVHDTMR-FVNYARQKGATIIGPNCPGAI 134 (297)
T ss_dssp GGGHHHHHHHHHHT-TCSEEEECCCCCCHHHHHH-HHHHHHHHTCEEECSSSCEEE
T ss_pred HHHHHHHHHHHHHC-CCCEEEEECCCCCHHHHHH-HHHHHHHcCCEEEcCCCCeeE
Confidence 99999999886553 2233667888996432111 000111223334568888766
No 216
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.32 E-value=0.00014 Score=73.48 Aligned_cols=92 Identities=10% Similarity=0.061 Sum_probs=62.5
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcC---ceecCCCcCCHHhhh-ccCCe
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG---FTEENGTLGDIYETI-SGSDL 181 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G---~~~~d~t~~~~~Eav-~~ADI 181 (582)
.++| +++.|||.|-+|.+++..|.+. |. +|.+.+|+.++..+.+.+.+ +. ..+.+++. .++|+
T Consensus 117 ~l~~-k~~lvlGaGg~~~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~-----~~~~~~l~~~~~Di 184 (272)
T 3pwz_A 117 PLRN-RRVLLLGAGGAVRGALLPFLQA------GPSELVIANRDMAKALALRNELDHSRLR-----ISRYEALEGQSFDI 184 (272)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------CCSEEEEECSCHHHHHHHHHHHCCTTEE-----EECSGGGTTCCCSE
T ss_pred CccC-CEEEEECccHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHHhccCCee-----EeeHHHhcccCCCE
Confidence 3678 9999999999999999999998 96 88888887666556665544 22 22333432 78999
Q ss_pred EEEeccchhHHHHHHHH-HhcCCCCcEEEEe
Q 007987 182 VLLLISDAAQADNYEKI-FSCMKPNSILGLS 211 (582)
Q Consensus 182 VILaVPd~a~~~Vl~eI-~~~Lk~GaiL~~a 211 (582)
||.+||.....+.- .+ ...++++.+|.+.
T Consensus 185 vInaTp~gm~~~~~-~i~~~~l~~~~~V~Dl 214 (272)
T 3pwz_A 185 VVNATSASLTADLP-PLPADVLGEAALAYEL 214 (272)
T ss_dssp EEECSSGGGGTCCC-CCCGGGGTTCSEEEES
T ss_pred EEECCCCCCCCCCC-CCCHHHhCcCCEEEEe
Confidence 99999976542110 01 1235566666544
No 217
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.32 E-value=0.00057 Score=65.84 Aligned_cols=93 Identities=12% Similarity=0.193 Sum_probs=62.3
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHH---hh-hccCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY---ET-ISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~---Ea-v~~ADIVILaVP 187 (582)
++|.|+|+|.+|..+++.|.+. |+ |++..++ ....+.+. .|+..-.+...+.+ ++ ++++|.||++++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~------g~-v~vid~~-~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS------EV-FVLAEDE-NVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS------EE-EEEESCG-GGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEECCChHHHHHHHHHHhC------Ce-EEEEECC-HHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 7899999999999999999888 87 6655443 44445555 66543222233332 33 788999999999
Q ss_pred chhHHHHHHHHHhcCCCC-cEEEEecC
Q 007987 188 DAAQADNYEKIFSCMKPN-SILGLSHG 213 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~G-aiL~~a~G 213 (582)
+....-....++..+.++ .++..+..
T Consensus 81 ~d~~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 81 SDSETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred CcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 886654444445556665 56666654
No 218
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=97.30 E-value=0.0007 Score=69.53 Aligned_cols=85 Identities=14% Similarity=0.155 Sum_probs=59.1
Q ss_pred CEEEEEccchhHH-HHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH---cCceecCCCcCCHHhhhcc--CCeEEEe
Q 007987 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA---AGFTEENGTLGDIYETISG--SDLVLLL 185 (582)
Q Consensus 112 kkIgIIG~GsmG~-AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~---~G~~~~d~t~~~~~Eav~~--ADIVILa 185 (582)
.+|||||+|.||. .++..|+.. .+++++...+.+ +..+.+.+ .|+.. ..+.++++.+ .|+|+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~-~~~~~a~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~ 72 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIR-----ETLEVKTIFDLH-VNEKAAAPFKEKGVNF----TADLNELLTDPEIELITIC 72 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECTT-CCHHHHHHHHTTTCEE----ESCTHHHHSCTTCCEEEEC
T ss_pred eEEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEECCC-HHHHHHHhhCCCCCeE----ECCHHHHhcCCCCCEEEEe
Confidence 5899999999998 577777654 156664333333 44555555 45553 5788998875 8999999
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEE
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+|+..+.++.... |+.|+-|.
T Consensus 73 tp~~~h~~~~~~a---l~aGk~Vl 93 (349)
T 3i23_A 73 TPAHTHYDLAKQA---ILAGKSVI 93 (349)
T ss_dssp SCGGGHHHHHHHH---HHTTCEEE
T ss_pred CCcHHHHHHHHHH---HHcCCEEE
Confidence 9999998776654 34565443
No 219
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=97.30 E-value=0.00029 Score=74.19 Aligned_cols=68 Identities=15% Similarity=0.106 Sum_probs=51.1
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc-cCCeEEEe
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLL 185 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~-~ADIVILa 185 (582)
.|+| |+|+|+|+|+||..+|+.|.+. |.+|++.+++..+..+.+.+.|... .+.+++.. ++|+++.+
T Consensus 170 ~L~G-ktV~V~G~G~VG~~~A~~L~~~------GakVvv~D~~~~~l~~~a~~~ga~~-----v~~~~ll~~~~DIvip~ 237 (364)
T 1leh_A 170 SLEG-LAVSVQGLGNVAKALCKKLNTE------GAKLVVTDVNKAAVSAAVAEEGADA-----VAPNAIYGVTCDIFAPC 237 (364)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHCCEE-----CCGGGTTTCCCSEEEEC
T ss_pred CCCc-CEEEEECchHHHHHHHHHHHHC------CCEEEEEcCCHHHHHHHHHHcCCEE-----EChHHHhccCCcEeecc
Confidence 6889 9999999999999999999998 9998876654333334555556552 34455544 89999877
Q ss_pred c
Q 007987 186 I 186 (582)
Q Consensus 186 V 186 (582)
.
T Consensus 238 a 238 (364)
T 1leh_A 238 A 238 (364)
T ss_dssp S
T ss_pred c
Confidence 4
No 220
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.30 E-value=0.00051 Score=70.37 Aligned_cols=70 Identities=20% Similarity=0.186 Sum_probs=44.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHHcCceecCCC-------cCCHHhhhccCCeE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGT-------LGDIYETISGSDLV 182 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~~G~~~~d~t-------~~~~~Eav~~ADIV 182 (582)
+||+|||.|+||.+++..|+.. |+ +++..+.+ .. ..++...++...... ..+..+++++||+|
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~------~~~~ev~l~Di~-~~-~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvV 78 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQ------GIADEIVLIDAN-ES-KAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLV 78 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSS-HH-HHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCC-cc-hHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEE
Confidence 7999999999999999999887 64 56554443 32 222222222100000 01345789999999
Q ss_pred EEeccch
Q 007987 183 LLLISDA 189 (582)
Q Consensus 183 ILaVPd~ 189 (582)
|++++..
T Consensus 79 iia~~~~ 85 (316)
T 1ldn_A 79 VICAGAN 85 (316)
T ss_dssp EECCSCC
T ss_pred EEcCCCC
Confidence 9997654
No 221
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=97.28 E-value=0.00049 Score=70.50 Aligned_cols=87 Identities=17% Similarity=0.156 Sum_probs=61.6
Q ss_pred CEEEEEccc-hhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCc-eecCCCcCCHHhhhc--cCCeEEEec
Q 007987 112 NQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGF-TEENGTLGDIYETIS--GSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~G-smG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~-~~~d~t~~~~~Eav~--~ADIVILaV 186 (582)
.+|||||+| .+|..++..|++. +.+++++ +.+++..+..+.+.+.|+ .. ..+.+++++ +.|+|++++
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~~~~~~----~~~~~~ll~~~~vD~V~i~t 90 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNL----SHLFEITAVTSRTRSHAEEFAKMVGNPAV----FDSYEELLESGLVDAVDLTL 90 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTT----TTTEEEEEEECSSHHHHHHHHHHHSSCEE----ESCHHHHHHSSCCSEEEECC
T ss_pred eeEEEEecCHHHHHHHHHHHHhC----CCceEEEEEEcCCHHHHHHHHHHhCCCcc----cCCHHHHhcCCCCCEEEEeC
Confidence 589999999 8999999999864 1155654 334443444455666776 32 678999886 589999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEE
Q 007987 187 SDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
|+..+.++.... |+.|+-|.
T Consensus 91 p~~~H~~~~~~a---l~aGkhVl 110 (340)
T 1zh8_A 91 PVELNLPFIEKA---LRKGVHVI 110 (340)
T ss_dssp CGGGHHHHHHHH---HHTTCEEE
T ss_pred CchHHHHHHHHH---HHCCCcEE
Confidence 999997776653 34566443
No 222
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=97.27 E-value=0.00058 Score=69.54 Aligned_cols=86 Identities=8% Similarity=0.046 Sum_probs=58.9
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc-CceecCCCcCCHHhhh----------cc
Q 007987 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETI----------SG 178 (582)
Q Consensus 111 ikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~-G~~~~d~t~~~~~Eav----------~~ 178 (582)
|.+|||||+ |.+|..++..|++. +.+++...+.+......+... +... ..+.++++ ++
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~l~~~~~~ 72 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEV------GGVLVASLDPATNVGLVDSFFPEAEF----FTEPEAFEAYLEDLRDRGEG 72 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCEE----ESCHHHHHHHHHHHHHTTCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCce----eCCHHHHHHHhhhhcccCCC
Confidence 579999999 78999999999987 776544444333322222222 2232 56778776 67
Q ss_pred CCeEEEeccchhHHHHHHHHHhcCCCCcEEE
Q 007987 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 179 ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
.|+|++++|+..+.++..... +.|+-|.
T Consensus 73 vD~V~I~tP~~~H~~~~~~al---~aGkhVl 100 (312)
T 3o9z_A 73 VDYLSIASPNHLHYPQIRMAL---RLGANAL 100 (312)
T ss_dssp CSEEEECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred CcEEEECCCchhhHHHHHHHH---HCCCeEE
Confidence 899999999999987776543 3566544
No 223
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.27 E-value=0.0001 Score=73.86 Aligned_cols=76 Identities=13% Similarity=-0.003 Sum_probs=52.6
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCc--eecCCCcCCHHhhhc-cCCeEE
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF--TEENGTLGDIYETIS-GSDLVL 183 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~--~~~d~t~~~~~Eav~-~ADIVI 183 (582)
.++| +++.|||.|.||.+++..|.+. |.+|++.+|+.++..+.+.+.+. .. ...+.+++.+ ++|+||
T Consensus 116 ~~~~-~~vlvlGaGg~g~a~a~~L~~~------G~~v~v~~R~~~~a~~l~~~~~~~~~~---~~~~~~~~~~~~~DivI 185 (272)
T 1p77_A 116 LRPN-QHVLILGAGGATKGVLLPLLQA------QQNIVLANRTFSKTKELAERFQPYGNI---QAVSMDSIPLQTYDLVI 185 (272)
T ss_dssp CCTT-CEEEEECCSHHHHTTHHHHHHT------TCEEEEEESSHHHHHHHHHHHGGGSCE---EEEEGGGCCCSCCSEEE
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHccccCCe---EEeeHHHhccCCCCEEE
Confidence 3678 9999999999999999999998 88888888875554555544321 10 0223444434 899999
Q ss_pred EeccchhHH
Q 007987 184 LLISDAAQA 192 (582)
Q Consensus 184 LaVPd~a~~ 192 (582)
.++|.....
T Consensus 186 n~t~~~~~~ 194 (272)
T 1p77_A 186 NATSAGLSG 194 (272)
T ss_dssp ECCCC----
T ss_pred ECCCCCCCC
Confidence 999987654
No 224
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=97.27 E-value=0.00045 Score=72.37 Aligned_cols=92 Identities=17% Similarity=0.151 Sum_probs=62.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhh---hhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLA---EAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLL 185 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~---~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILa 185 (582)
.+|||||+|.||..++.++++... +...+.+++ |.+++..+..+.|++.|+.. ...+.+++++ +.|+|+++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~---~y~d~~~ll~~~~vD~V~I~ 103 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEK---AYGDWRELVNDPQVDVVDIT 103 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSE---EESSHHHHHHCTTCCEEEEC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCe---EECCHHHHhcCCCCCEEEEC
Confidence 379999999999999999987510 000123443 33444445556677778742 1578999885 57999999
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEE
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
||+..+.++....+ +.|+-|.
T Consensus 104 tp~~~H~~~~~~al---~aGkhVl 124 (412)
T 4gqa_A 104 SPNHLHYTMAMAAI---AAGKHVY 124 (412)
T ss_dssp SCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcHHHHHHHHHHH---HcCCCeE
Confidence 99999988776543 3566443
No 225
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=97.27 E-value=0.00067 Score=70.09 Aligned_cols=94 Identities=17% Similarity=0.169 Sum_probs=61.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEe-cCCcccHHHHHHcCceecC--------------CCcCCHHhhh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGL-RKGSRSFAEARAAGFTEEN--------------GTLGDIYETI 176 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~-r~~sks~~~A~~~G~~~~d--------------~t~~~~~Eav 176 (582)
.+|||||+|.||..+++.|... .+++++... +........++..|+..-. ....+.++++
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~~~v~~d~~~l~ 77 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQ-----DDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL 77 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcC-----CCCEEEEEEcCCHHHHHHHHHhcCccccccccccceeccCCceEEcCcHHHhc
Confidence 5899999999999999999865 145554333 3322333455556642100 0124678888
Q ss_pred ccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 177 ~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
.+.|+|++++|...+.+.... +++.|+.|++.++
T Consensus 78 ~~vDvV~~aTp~~~h~~~a~~---~l~aGk~Vi~sap 111 (334)
T 2czc_A 78 EKVDIIVDATPGGIGAKNKPL---YEKAGVKAIFQGG 111 (334)
T ss_dssp TTCSEEEECCSTTHHHHHHHH---HHHHTCEEEECTT
T ss_pred cCCCEEEECCCccccHHHHHH---HHHcCCceEeecc
Confidence 899999999999988766653 3455766665544
No 226
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=97.24 E-value=0.00063 Score=69.46 Aligned_cols=86 Identities=8% Similarity=0.037 Sum_probs=58.6
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc-CceecCCCcCCHHhhh-----------c
Q 007987 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETI-----------S 177 (582)
Q Consensus 111 ikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~-G~~~~d~t~~~~~Eav-----------~ 177 (582)
|.+|||||+ |.||..++.+|++. +.+++...+.+......+... +... ..+.++++ +
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~------~~~lvav~d~~~~~~~~~~~~~~~~~----~~~~~~ll~~~~~l~~~~~~ 72 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDT------GNCLVSAYDINDSVGIIDSISPQSEF----FTEFEFFLDHASNLKRDSAT 72 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHT------TCEEEEEECSSCCCGGGGGTCTTCEE----ESSHHHHHHHHHHHTTSTTT
T ss_pred ceEEEEECCCcHHHHHHHHHHHhC------CCEEEEEEcCCHHHHHHHhhCCCCcE----ECCHHHHHHhhhhhhhccCC
Confidence 579999999 79999999999987 776544444333222222222 2332 56777776 5
Q ss_pred cCCeEEEeccchhHHHHHHHHHhcCCCCcEEE
Q 007987 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 178 ~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+.|+|++++|+..+.++..... +.|+-|.
T Consensus 73 ~vD~V~I~tP~~~H~~~~~~al---~aGkhVl 101 (318)
T 3oa2_A 73 ALDYVSICSPNYLHYPHIAAGL---RLGCDVI 101 (318)
T ss_dssp SCCEEEECSCGGGHHHHHHHHH---HTTCEEE
T ss_pred CCcEEEECCCcHHHHHHHHHHH---HCCCeEE
Confidence 7899999999999988776543 3465443
No 227
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.23 E-value=0.00026 Score=70.71 Aligned_cols=77 Identities=22% Similarity=0.099 Sum_probs=54.0
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhh-ccCCeEEEe
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLL 185 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav-~~ADIVILa 185 (582)
.++| +++.|+|.|.||.+++..|.+. |.+|++.+|+.++..+.+.+.+... .-...+.+++. .++|+||.+
T Consensus 116 ~l~~-k~vlViGaGg~g~a~a~~L~~~------G~~V~v~~R~~~~~~~la~~~~~~~-~~~~~~~~~~~~~~~DivVn~ 187 (271)
T 1nyt_A 116 IRPG-LRILLIGAGGASRGVLLPLLSL------DCAVTITNRTVSRAEELAKLFAHTG-SIQALSMDELEGHEFDLIINA 187 (271)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSGGGTTCCCSEEEEC
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHc------CCEEEEEECCHHHHHHHHHHhhccC-CeeEecHHHhccCCCCEEEEC
Confidence 3678 9999999999999999999998 8888888776555445555443200 00022333433 589999999
Q ss_pred ccchhH
Q 007987 186 ISDAAQ 191 (582)
Q Consensus 186 VPd~a~ 191 (582)
+|....
T Consensus 188 t~~~~~ 193 (271)
T 1nyt_A 188 TSSGIS 193 (271)
T ss_dssp CSCGGG
T ss_pred CCCCCC
Confidence 997654
No 228
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.23 E-value=0.0012 Score=68.44 Aligned_cols=84 Identities=17% Similarity=0.220 Sum_probs=57.0
Q ss_pred CEEEEEccchhHHH-HHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc-CceecCCCcCCHHhhhc--cCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~-G~~~~d~t~~~~~Eav~--~ADIVILaVP 187 (582)
.+|||||+|.||.. ++..|+.. .+++++...+.+... .+.+. +... ..+.++++. +.|+|++++|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~--~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~tp 76 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSV-----PGLNLAFVASRDEEK--VKRDLPDVTV----IASPEAAVQHPDVDLVVIASP 76 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCHHH--HHHHCTTSEE----ESCHHHHHTCTTCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHH--HHhhCCCCcE----ECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 77777764 156664333333321 12233 4443 578999987 7899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 007987 188 DAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+..+.++.... |+.|+-|.
T Consensus 77 ~~~H~~~~~~a---l~aGk~Vl 95 (364)
T 3e82_A 77 NATHAPLARLA---LNAGKHVV 95 (364)
T ss_dssp GGGHHHHHHHH---HHTTCEEE
T ss_pred hHHHHHHHHHH---HHCCCcEE
Confidence 99998776643 34566544
No 229
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=97.22 E-value=0.00033 Score=71.71 Aligned_cols=85 Identities=12% Similarity=0.150 Sum_probs=55.8
Q ss_pred CEEEEEccchhHHH-HHHHH-HHhhhhhcCCceEE-EEecCCcccHHHHHH-cCceecCCCcCCHHhhhcc--CCeEEEe
Q 007987 112 NQIGVIGWGSQGPA-QAQNL-RDSLAEAKSDIVVK-VGLRKGSRSFAEARA-AGFTEENGTLGDIYETISG--SDLVLLL 185 (582)
Q Consensus 112 kkIgIIG~GsmG~A-iA~nL-rds~~~~g~G~~Vi-Vg~r~~sks~~~A~~-~G~~~~d~t~~~~~Eav~~--ADIVILa 185 (582)
.+|||||+|.||.. ++.++ ... .+++++ +.++...+. +.+.+ .|... ..+.++++.+ .|+|+++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~-----~~~~l~av~d~~~~~~-~~~~~~~~~~~----~~~~~~ll~~~~~D~V~i~ 72 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRK-----DSWHVAHIFRRHAKPE-EQAPIYSHIHF----TSDLDEVLNDPDVKLVVVC 72 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCT-----TTEEEEEEECSSCCGG-GGSGGGTTCEE----ESCTHHHHTCTTEEEEEEC
T ss_pred eEEEEEecCHHHHHHHHHHHHhcC-----CCeEEEEEEcCCHhHH-HHHHhcCCCce----ECCHHHHhcCCCCCEEEEc
Confidence 58999999999986 55524 332 166665 344443333 32323 35543 5788998876 8999999
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEE
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+|+..+.++.... ++.|+.|.
T Consensus 73 tp~~~h~~~~~~a---l~aGk~Vl 93 (345)
T 3f4l_A 73 THADSHFEYAKRA---LEAGKNVL 93 (345)
T ss_dssp SCGGGHHHHHHHH---HHTTCEEE
T ss_pred CChHHHHHHHHHH---HHcCCcEE
Confidence 9999998776643 34566554
No 230
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=97.21 E-value=0.00063 Score=70.30 Aligned_cols=87 Identities=15% Similarity=0.057 Sum_probs=57.1
Q ss_pred CEEEEEccchhHHH-HHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhcc--CCeEEEecc
Q 007987 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~--ADIVILaVP 187 (582)
.+|||||+|.||.. ++.+|++. .+++++ +.+++..+..+.+.+.+.. ....+.++++++ .|+|++++|
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~~~~~a~~~~~~---~~~~~~~~ll~~~~vD~V~i~tp 77 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQM-----QDIRIVAACDSDLERARRVHRFISDI---PVLDNVPAMLNQVPLDAVVMAGP 77 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTC-----TTEEEEEEECSSHHHHGGGGGTSCSC---CEESSHHHHHHHSCCSEEEECSC
T ss_pred ceEEEECCCHHHHHHHHHHHHhC-----CCcEEEEEEcCCHHHHHHHHHhcCCC---cccCCHHHHhcCCCCCEEEEcCC
Confidence 58999999999985 88998764 156665 3333322222223333322 125789999875 499999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 007987 188 DAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+..+.++.... |+.|+-|.
T Consensus 78 ~~~H~~~~~~a---l~aGkhVl 96 (359)
T 3m2t_A 78 PQLHFEMGLLA---MSKGVNVF 96 (359)
T ss_dssp HHHHHHHHHHH---HHTTCEEE
T ss_pred cHHHHHHHHHH---HHCCCeEE
Confidence 99998877654 34565443
No 231
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.21 E-value=0.0013 Score=67.83 Aligned_cols=66 Identities=15% Similarity=0.169 Sum_probs=43.9
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHH--Hc-------CceecCCCcCCHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEAR--AA-------GFTEENGTLGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~--~~-------G~~~~d~t~~~~~Eav~~ADI 181 (582)
+||+|||.|.||.++|..|... |+ +|++.+.+..+....+. +. .... ....+. +++++||+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~------g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i--~~t~d~-~al~~aD~ 75 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQK------NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKV--SGSNTY-DDLAGADV 75 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCE--EEECCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEE--EECCCH-HHhCCCCE
Confidence 7999999999999999999988 77 75555444332211111 11 1111 002456 78999999
Q ss_pred EEEec
Q 007987 182 VLLLI 186 (582)
Q Consensus 182 VILaV 186 (582)
||+++
T Consensus 76 Vi~a~ 80 (322)
T 1t2d_A 76 VIVTA 80 (322)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 99998
No 232
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.19 E-value=0.00041 Score=70.29 Aligned_cols=88 Identities=16% Similarity=0.032 Sum_probs=62.4
Q ss_pred CCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch
Q 007987 110 GINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (582)
Q Consensus 110 gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~ 189 (582)
| +++.|||.|-+|.+++..|.+. |.+|.|.+|+.++..+.+ +.|+.. .+.+++ .++|+||.+||..
T Consensus 118 ~-k~vlvlGaGGaaraia~~L~~~------G~~v~V~nRt~~ka~~la-~~~~~~-----~~~~~l-~~~DiVInaTp~G 183 (269)
T 3phh_A 118 Y-QNALILGAGGSAKALACELKKQ------GLQVSVLNRSSRGLDFFQ-RLGCDC-----FMEPPK-SAFDLIINATSAS 183 (269)
T ss_dssp C-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSSCTTHHHHH-HHTCEE-----ESSCCS-SCCSEEEECCTTC
T ss_pred C-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHH-HCCCeE-----ecHHHh-ccCCEEEEcccCC
Confidence 7 9999999999999999999998 888989999877776777 677653 334443 3899999999965
Q ss_pred hHHH-HHH-H-HHhcCCCCcEEEEe
Q 007987 190 AQAD-NYE-K-IFSCMKPNSILGLS 211 (582)
Q Consensus 190 a~~~-Vl~-e-I~~~Lk~GaiL~~a 211 (582)
...+ .+. + +...++++.+|++.
T Consensus 184 m~~~~~l~~~~l~~~l~~~~~v~D~ 208 (269)
T 3phh_A 184 LHNELPLNKEVLKGYFKEGKLAYDL 208 (269)
T ss_dssp CCCSCSSCHHHHHHHHHHCSEEEES
T ss_pred CCCCCCCChHHHHhhCCCCCEEEEe
Confidence 3321 111 1 22234456666654
No 233
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=97.16 E-value=0.0017 Score=69.10 Aligned_cols=89 Identities=17% Similarity=0.211 Sum_probs=58.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHH-HH---HcCceecCCCcC----CHHhhhc--cCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-AR---AAGFTEENGTLG----DIYETIS--GSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~-A~---~~G~~~~d~t~~----~~~Eav~--~ADI 181 (582)
.+|||||+|.||..++.+|+.. .+++++...+.+....+. +. +.|+.. ..... +.+++++ +.|+
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~-----~~~~lvav~d~~~~~~~~~a~~~~~~g~~~-~~~~~~~~~~~~~ll~~~~vD~ 94 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARR-----DDVEIVAFADPDPYMVGRAQEILKKNGKKP-AKVFGNGNDDYKNMLKDKNIDA 94 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSCHHHHHHHHHHHHHTTCCC-CEEECSSTTTHHHHTTCTTCCE
T ss_pred ceEEEEecCHHHHHHHHHHHhC-----CCcEEEEEEeCCHHHHHHHHHHHHhcCCCC-CceeccCCCCHHHHhcCCCCCE
Confidence 6899999999999999998864 156654333433332322 22 345310 00145 8899887 5899
Q ss_pred EEEeccchhHHHHHHHHHhcCCCCcEEE
Q 007987 182 VLLLISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 182 VILaVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
|++++|+..+.++.... |+.|+-|.
T Consensus 95 V~i~tp~~~h~~~~~~a---l~aGkhV~ 119 (444)
T 2ixa_A 95 VFVSSPWEWHHEHGVAA---MKAGKIVG 119 (444)
T ss_dssp EEECCCGGGHHHHHHHH---HHTTCEEE
T ss_pred EEEcCCcHHHHHHHHHH---HHCCCeEE
Confidence 99999999997766653 34566443
No 234
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.10 E-value=0.0026 Score=65.13 Aligned_cols=65 Identities=17% Similarity=0.173 Sum_probs=44.8
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCc---ccHHHHHHc--CceecCCCcCCHHhhhccCCeEE
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGS---RSFAEARAA--GFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~s---ks~~~A~~~--G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
++||+|||.|+||.+++..|... |+ ++++.+.... ...+..... .+.. ..+. +++++||+||
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~------g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~----t~d~-~~l~~aD~Vi 82 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAK------GIADRLVLLDLSEGTKGATMDLEIFNLPNVEI----SKDL-SASAHSKVVI 82 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECCC-----CHHHHHHHTCTTEEE----ESCG-GGGTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhc------CCCCEEEEEcCCcchHHHHHHHhhhcCCCeEE----eCCH-HHHCCCCEEE
Confidence 38999999999999999999887 76 7766665432 222222211 1221 2466 7789999999
Q ss_pred Eec
Q 007987 184 LLI 186 (582)
Q Consensus 184 LaV 186 (582)
++.
T Consensus 83 ~aa 85 (303)
T 2i6t_A 83 FTV 85 (303)
T ss_dssp ECC
T ss_pred EcC
Confidence 997
No 235
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=97.09 E-value=0.0013 Score=67.84 Aligned_cols=84 Identities=11% Similarity=0.192 Sum_probs=57.7
Q ss_pred CEEEEEccchhHHH-HHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc-CceecCCCcCCHHhhhc--cCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETIS--GSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~-G~~~~d~t~~~~~Eav~--~ADIVILaVP 187 (582)
.+|||||+|.||.. ++..|+.. .+++++...+.+.. +.+.+. +... ..+.+++++ +.|+|++++|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~--~~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp 74 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVL-----DEYQISKIMTSRTE--EVKRDFPDAEV----VHELEEITNDPAIELVIVTTP 74 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTC-----TTEEEEEEECSCHH--HHHHHCTTSEE----ESSTHHHHTCTTCCEEEECSC
T ss_pred ceEEEEccCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHH--HHHhhCCCCce----ECCHHHHhcCCCCCEEEEcCC
Confidence 58999999999997 77777654 15666433333322 234444 4443 578899887 6899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 007987 188 DAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+..+.++.... |+.|+-|.
T Consensus 75 ~~~H~~~~~~a---l~aGkhVl 93 (358)
T 3gdo_A 75 SGLHYEHTMAC---IQAGKHVV 93 (358)
T ss_dssp TTTHHHHHHHH---HHTTCEEE
T ss_pred cHHHHHHHHHH---HHcCCeEE
Confidence 99998776653 34566444
No 236
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.08 E-value=0.0019 Score=68.89 Aligned_cols=94 Identities=14% Similarity=0.181 Sum_probs=64.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCH---Hhh-hccCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~---~Ea-v~~ADIVILaVP 187 (582)
++|.|||+|.+|..+++.|++. |++|++.++ +....+.+++.|+.+--|...+. .++ +.+||+||++++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~------g~~vvvId~-d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS------GVKMVVLDH-DPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT------TCCEEEEEC-CHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CeEEEECCCHHHHHHHHHHHHC------CCCEEEEEC-CHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 6799999999999999999998 998876554 44556777788874322223332 233 678999999999
Q ss_pred chhHHHHHHHHHhcCCCC-cEEEEec
Q 007987 188 DAAQADNYEKIFSCMKPN-SILGLSH 212 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~G-aiL~~a~ 212 (582)
+......+-.....+.|+ .+|.-+.
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 876654444444445554 3444443
No 237
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=97.03 E-value=0.001 Score=68.27 Aligned_cols=83 Identities=8% Similarity=0.143 Sum_probs=56.1
Q ss_pred CEEEEEccchhHHH-HHHHHHHhhhhhcCCceEEEEecCCcccHHHHH-Hc-CceecCCCcCCHHhhhcc--CCeEEEec
Q 007987 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AA-GFTEENGTLGDIYETISG--SDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~-~~-G~~~~d~t~~~~~Eav~~--ADIVILaV 186 (582)
.+|||||+|.||.. ++..|++. .+++++...+.+. +++. .. +... ..+.++++.+ .|+|++++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~-----~~~~l~av~d~~~---~~~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~t 75 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGT-----PGLELAGVSSSDA---SKVHADWPAIPV----VSDPQMLFNDPSIDLIVIPT 75 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTS-----TTEEEEEEECSCH---HHHHTTCSSCCE----ESCHHHHHHCSSCCEEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHhhC-----CCcEEEEEECCCH---HHHHhhCCCCce----ECCHHHHhcCCCCCEEEEeC
Confidence 58999999999997 88888764 1566543333322 2222 22 3332 5789998875 89999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEE
Q 007987 187 SDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
|+..+.++.... |+.|+-|.
T Consensus 76 p~~~H~~~~~~a---l~aGkhV~ 95 (352)
T 3kux_A 76 PNDTHFPLAQSA---LAAGKHVV 95 (352)
T ss_dssp CTTTHHHHHHHH---HHTTCEEE
T ss_pred ChHHHHHHHHHH---HHCCCcEE
Confidence 999998776653 34566443
No 238
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=97.03 E-value=0.0013 Score=68.10 Aligned_cols=86 Identities=8% Similarity=-0.005 Sum_probs=60.0
Q ss_pred CEEEEEccchhHH-HHHHHHHHhhhhhcCCceEEEEec-CCcccHHHHHHcCceecCCCcCCHHhhhcc--CCeEEEecc
Q 007987 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTEENGTLGDIYETISG--SDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~-AiA~nLrds~~~~g~G~~ViVg~r-~~sks~~~A~~~G~~~~d~t~~~~~Eav~~--ADIVILaVP 187 (582)
.+|||||+|.+|. .++..++.. +++++...+ ...+..+.+.+.|... ...+.++++.+ .|+|++++|
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~------~~~lvav~d~~~~~a~~~a~~~~~~~---~~~~~~~ll~~~~vD~V~I~tp 97 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRA------GARLAGFHEKDDALAAEFSAVYADAR---RIATAEEILEDENIGLIVSAAV 97 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHT------TCEEEEEECSCHHHHHHHHHHSSSCC---EESCHHHHHTCTTCCEEEECCC
T ss_pred cEEEEECcCHHHHHHHHHHhhcC------CcEEEEEEcCCHHHHHHHHHHcCCCc---ccCCHHHHhcCCCCCEEEEeCC
Confidence 6899999999984 567777655 777654333 3334445666776421 25789999875 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 007987 188 DAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+..+.++.... |+.|+-|.
T Consensus 98 ~~~H~~~~~~a---l~aGkhVl 116 (361)
T 3u3x_A 98 SSERAELAIRA---MQHGKDVL 116 (361)
T ss_dssp HHHHHHHHHHH---HHTTCEEE
T ss_pred hHHHHHHHHHH---HHCCCeEE
Confidence 99998776653 34566444
No 239
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.01 E-value=0.0033 Score=63.62 Aligned_cols=161 Identities=13% Similarity=0.109 Sum_probs=94.9
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccH---HHHH----HcCceecCCCcCCHHhhhccCCeEE
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF---AEAR----AAGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~---~~A~----~~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
.||+|+| +|.||..+++.+.+. .+++++...+...... +... ..|+.. ..++++++.++|+||
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~-----~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v----~~dl~~ll~~~DVVI 78 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAA-----PDATLVGALDRTGSPQLGQDAGAFLGKQTGVAL----TDDIERVCAEADYLI 78 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHC-----TTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBC----BCCHHHHHHHCSEEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEEecCcccccccHHHHhCCCCCcee----cCCHHHHhcCCCEEE
Confidence 7899999 899999999998865 1667655444322100 0001 113432 468889999999999
Q ss_pred EeccchhHHHHHHHHHhcCCCCc-EEEEecCchhhhhhcccccCCCCCcEEEeccCCChhhH--HHHHhhcccccCCCce
Q 007987 184 LLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV--RRLYVQGKEINGAGIN 260 (582)
Q Consensus 184 LaVPd~a~~~Vl~eI~~~Lk~Ga-iL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~v--R~ly~~G~e~~G~Gv~ 260 (582)
-.++|....+++..... .|. +|+-..|++-..++. ....-+.+.+ ...||..--+. .++-+.-....+.+..
T Consensus 79 DfT~p~a~~~~~~~al~---~G~~vVigTTG~s~~~~~~-L~~aa~~~~v-v~a~N~s~Gv~l~~~~~~~aa~~l~~~~d 153 (272)
T 4f3y_A 79 DFTLPEGTLVHLDAALR---HDVKLVIGTTGFSEPQKAQ-LRAAGEKIAL-VFSANMSVGVNVTMKLLEFAAKQFAQGYD 153 (272)
T ss_dssp ECSCHHHHHHHHHHHHH---HTCEEEECCCCCCHHHHHH-HHHHTTTSEE-EECSCCCHHHHHHHHHHHHHHHHTSSSCE
T ss_pred EcCCHHHHHHHHHHHHH---cCCCEEEECCCCCHHHHHH-HHHHhccCCE-EEECCCCHHHHHHHHHHHHHHHhcCcCCC
Confidence 99999887776665433 344 444456886432211 1112345565 58898876541 1110010011112222
Q ss_pred E-EEeecc----C-CCHHHHHHHHHHHHHhCC
Q 007987 261 S-SFAVHQ----D-VDGRATNVALGWSVALGS 286 (582)
Q Consensus 261 a-liAv~q----d-~tgeale~alala~aiG~ 286 (582)
. ++-.|. | +||.|+.+++.+.++.|.
T Consensus 154 iei~E~HH~~K~DaPSGTA~~la~~i~~~~~~ 185 (272)
T 4f3y_A 154 IEIIEAHHRHKVDAPSGTALMMGETIAAATGR 185 (272)
T ss_dssp EEEEEEECTTCCSSSCHHHHHHHHHHHHTTTC
T ss_pred EEEEEecCCCCCCCCCHHHHHHHHHHHHHhCc
Confidence 2 244443 3 589999999999988875
No 240
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=97.01 E-value=0.00038 Score=68.28 Aligned_cols=107 Identities=14% Similarity=0.270 Sum_probs=63.2
Q ss_pred CEEEEEccchhHHHHHHH--HHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccch
Q 007987 112 NQIGVIGWGSQGPAQAQN--LRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDA 189 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~n--Lrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~ 189 (582)
++|+|||+|++|.++++. .... |++++...+.++..... ...|+.+. ...++++++++.|+|++++|..
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~------g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~eli~~~D~ViIAvPs~ 156 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNN------NTKISMAFDINESKIGT-EVGGVPVY--NLDDLEQHVKDESVAILTVPAV 156 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------------CCEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHCSSCCEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccC------CcEEEEEEeCCHHHHHh-HhcCCeee--chhhHHHHHHhCCEEEEecCch
Confidence 689999999999999994 2233 77766555544432221 11344321 1456788887679999999998
Q ss_pred hHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEecc
Q 007987 190 AQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCP 237 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~P 237 (582)
.+.++.+.+...= -..++.+.. . .+.+|+++.|-.++.
T Consensus 157 ~~~ei~~~l~~aG-i~~Ilnf~P-~--------~l~vp~~v~v~~vdl 194 (215)
T 2vt3_A 157 AAQSITDRLVALG-IKGILNFTP-A--------RLNVPEHIRIHHIDL 194 (215)
T ss_dssp HHHHHHHHHHHTT-CCEEEECSS-C--------CCCCCTTSEEEECCH
T ss_pred hHHHHHHHHHHcC-CCEEEEcCc-e--------eccCCCceEEEEeCc
Confidence 8888887765421 112333332 2 124566666655544
No 241
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.01 E-value=0.0035 Score=63.95 Aligned_cols=67 Identities=15% Similarity=0.145 Sum_probs=43.9
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHH--HcC-------ceecCCCcCCHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEAR--AAG-------FTEENGTLGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~--~~G-------~~~~d~t~~~~~Eav~~ADI 181 (582)
+||+|||.|.||.+++..|... |+ ++++.+.+..+....+. ..+ ... ....+. +++++||+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~------g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i--~~t~d~-~a~~~aD~ 73 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAK------ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRV--TGTNNY-ADTANSDV 73 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCE--EEESCG-GGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEE--EECCCH-HHHCCCCE
Confidence 6899999999999999999887 76 75554444332222121 111 111 001455 78999999
Q ss_pred EEEecc
Q 007987 182 VLLLIS 187 (582)
Q Consensus 182 VILaVP 187 (582)
||++++
T Consensus 74 Vi~a~g 79 (309)
T 1ur5_A 74 IVVTSG 79 (309)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999974
No 242
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.99 E-value=0.00092 Score=68.98 Aligned_cols=84 Identities=10% Similarity=0.116 Sum_probs=57.3
Q ss_pred CEEEEEccchhHHH-HHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc-CceecCCCcCCHHhhhcc--CCeEEEecc
Q 007987 112 NQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIYETISG--SDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~-G~~~~d~t~~~~~Eav~~--ADIVILaVP 187 (582)
.+|||||+|.||.. ++..|+.. .+++++...+.+... .+.+. +... ..+.++++.+ .|+|++++|
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~-----~~~~l~av~d~~~~~--~~~~~~~~~~----~~~~~~ll~~~~vD~V~i~tp 74 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTN-----PHFELYKIVERSKEL--SKERYPQASI----VRSFKELTEDPEIDLIVVNTP 74 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHC-----TTEEEEEEECSSCCG--GGTTCTTSEE----ESCSHHHHTCTTCCEEEECSC
T ss_pred eEEEEECCCHHHHHHHHHHHhhC-----CCeEEEEEEcCCHHH--HHHhCCCCce----ECCHHHHhcCCCCCEEEEeCC
Confidence 58999999999997 78777764 156654333333322 23344 4443 5788998876 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 007987 188 DAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+..+.++.... |+.|+-|.
T Consensus 75 ~~~H~~~~~~a---l~aGkhVl 93 (362)
T 3fhl_A 75 DNTHYEYAGMA---LEAGKNVV 93 (362)
T ss_dssp GGGHHHHHHHH---HHTTCEEE
T ss_pred hHHHHHHHHHH---HHCCCeEE
Confidence 99998776653 34566443
No 243
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=96.96 E-value=0.0011 Score=71.62 Aligned_cols=82 Identities=7% Similarity=0.099 Sum_probs=58.1
Q ss_pred CEEEEEcc----chhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEE
Q 007987 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (582)
Q Consensus 112 kkIgIIG~----GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVIL 184 (582)
.+|||||+ |.||..++.+|+.. ..+++++ |.++...+..+.+.+.|+.. .....+.+++++ +.|+|++
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~----~~~~~lvav~d~~~~~a~~~a~~~g~~~-~~~~~d~~ell~~~~vD~V~I 114 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQL----SSQFQIVALYNPTLKSSLQTIEQLQLKH-ATGFDSLESFAQYKDIDMIVV 114 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHT----TTTEEEEEEECSCHHHHHHHHHHTTCTT-CEEESCHHHHHHCTTCSEEEE
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 68999999 99999999999863 0166654 33443334445566677630 012678999885 6899999
Q ss_pred eccchhHHHHHHHH
Q 007987 185 LISDAAQADNYEKI 198 (582)
Q Consensus 185 aVPd~a~~~Vl~eI 198 (582)
++|+..+.++....
T Consensus 115 ~tp~~~H~~~~~~a 128 (479)
T 2nvw_A 115 SVKVPEHYEVVKNI 128 (479)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHH
Confidence 99999998777653
No 244
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=96.96 E-value=0.00052 Score=72.25 Aligned_cols=89 Identities=9% Similarity=0.055 Sum_probs=62.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAA 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a 190 (582)
.||+|||+| +|...+..+++. ..+++++ |..+...++.+.|++.|+.. ..+.++++.+.|+|+++||+..
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~----~~~~elvav~~~~~~~a~~~a~~~gv~~----~~~~~~l~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQP----PEGLELVGLLAQGSARSRELAHAFGIPL----YTSPEQITGMPDIACIVVRSTV 78 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSC----CTTEEEEEEECCSSHHHHHHHHHTTCCE----ESSGGGCCSCCSEEEECCC--C
T ss_pred CEEEEEehH-HHHHHHHHHHhC----CCCeEEEEEECCCHHHHHHHHHHhCCCE----ECCHHHHhcCCCEEEEECCCcc
Confidence 589999999 799888887764 1156654 34455567778889999875 6789999999999999999887
Q ss_pred HHHH-HHHHHhcCCCCcEEE
Q 007987 191 QADN-YEKIFSCMKPNSILG 209 (582)
Q Consensus 191 ~~~V-l~eI~~~Lk~GaiL~ 209 (582)
+... ++-....|+.|+-|.
T Consensus 79 h~~~~~~~a~~al~aGkhVl 98 (372)
T 4gmf_A 79 AGGAGTQLARHFLARGVHVI 98 (372)
T ss_dssp TTSHHHHHHHHHHHTTCEEE
T ss_pred cchhHHHHHHHHHHcCCcEE
Confidence 7322 222234455676554
No 245
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=96.94 E-value=0.0012 Score=68.31 Aligned_cols=86 Identities=12% Similarity=0.083 Sum_probs=63.0
Q ss_pred CEEEEEc-cchhHHH-HH----HHHHHhhhhhcCC-ce----------EEEEecCCcccHHHHHHcCceecCCCcCCHHh
Q 007987 112 NQIGVIG-WGSQGPA-QA----QNLRDSLAEAKSD-IV----------VKVGLRKGSRSFAEARAAGFTEENGTLGDIYE 174 (582)
Q Consensus 112 kkIgIIG-~GsmG~A-iA----~nLrds~~~~g~G-~~----------ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~E 174 (582)
.+||||| +|.||.. ++ ..+++. + +. +.+.+++..+..+.+.+.|+.. ...+.++
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~------~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~~~~~~---~~~~~~~ 77 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQ------GGVRLKNGDRIMPDPILVGRSAEKVEALAKRFNIAR---WTTDLDA 77 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHH------TSEECTTSCEEEEEEEEECSSSHHHHHHHHHTTCCC---EESCHHH
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhc------CceeecCCcccceeeEEEcCCHHHHHHHHHHhCCCc---ccCCHHH
Confidence 4799999 9999998 88 777776 3 22 1356666666667777888741 1578999
Q ss_pred hhcc--CCeEEEeccchhHHHHHHHHHhcCCCCcEEE
Q 007987 175 TISG--SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 175 av~~--ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
++++ .|+|++++|+..+.++.... |+.|+-|.
T Consensus 78 ll~~~~iD~V~i~tp~~~h~~~~~~a---l~~Gk~V~ 111 (383)
T 3oqb_A 78 ALADKNDTMFFDAATTQARPGLLTQA---INAGKHVY 111 (383)
T ss_dssp HHHCSSCCEEEECSCSSSSHHHHHHH---HTTTCEEE
T ss_pred HhcCCCCCEEEECCCchHHHHHHHHH---HHCCCeEE
Confidence 8865 89999999999987766543 45666544
No 246
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=96.93 E-value=0.0029 Score=65.00 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=62.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCC-cc-cHHHHHHcCceecCCCcCCHHhhh-----ccCCeEEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SR-SFAEARAAGFTEENGTLGDIYETI-----SGSDLVLL 184 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~-sk-s~~~A~~~G~~~~d~t~~~~~Eav-----~~ADIVIL 184 (582)
.+|||||+|.+|..++..|.+.+ .+++++...+.+ .+ ..+.+++.|+... ..+.++++ ++.|+|++
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~----~~~elvav~d~~~~~~~~~~a~~~g~~~~---~~~~e~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNA----KYLEMGAMVGIDAASDGLARAQRMGVTTT---YAGVEGLIKLPEFADIDFVFD 77 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHC----SSEEEEEEECSCTTCHHHHHHHHTTCCEE---SSHHHHHHHSGGGGGEEEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhC----cCeEEEEEEeCChhhhHHHHHHHcCCCcc---cCCHHHHHhccCCCCCcEEEE
Confidence 58999999999999999995520 155554433433 33 3566778887420 23456664 45799999
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
++|...+.++....... ++|+.|++...
T Consensus 78 atp~~~h~~~a~~al~a-~~Gk~Vi~ekp 105 (312)
T 1nvm_B 78 ATSASAHVQNEALLRQA-KPGIRLIDLTP 105 (312)
T ss_dssp CSCHHHHHHHHHHHHHH-CTTCEEEECST
T ss_pred CCChHHHHHHHHHHHHh-CCCCEEEEcCc
Confidence 99988887776654332 24777766443
No 247
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=96.90 E-value=0.001 Score=70.83 Aligned_cols=82 Identities=13% Similarity=0.143 Sum_probs=57.6
Q ss_pred CEEEEEcc----chhHHHHHHHHHHhhhhhcCCceEE-EEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEE
Q 007987 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVK-VGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLL 184 (582)
Q Consensus 112 kkIgIIG~----GsmG~AiA~nLrds~~~~g~G~~Vi-Vg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVIL 184 (582)
.+|||||+ |.||..++.+|++. ..+++++ |.++...+..+.+.+.|+.. .....+.++++. +.|+|++
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~----~~~~~lvav~d~~~~~~~~~a~~~g~~~-~~~~~~~~~ll~~~~vD~V~i 95 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQL----SSQFQITALYSPKIETSIATIQRLKLSN-ATAFPTLESFASSSTIDMIVI 95 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHT----TTTEEEEEEECSSHHHHHHHHHHTTCTT-CEEESSHHHHHHCSSCSEEEE
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhc----CCCeEEEEEEeCCHHHHHHHHHHcCCCc-ceeeCCHHHHhcCCCCCEEEE
Confidence 58999999 99999999999863 0166654 33333334445566667630 011578999886 6899999
Q ss_pred eccchhHHHHHHHH
Q 007987 185 LISDAAQADNYEKI 198 (582)
Q Consensus 185 aVPd~a~~~Vl~eI 198 (582)
++|+..+.++....
T Consensus 96 ~tp~~~H~~~~~~a 109 (438)
T 3btv_A 96 AIQVASHYEVVMPL 109 (438)
T ss_dssp CSCHHHHHHHHHHH
T ss_pred eCCcHHHHHHHHHH
Confidence 99999998776643
No 248
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=96.88 E-value=0.0007 Score=66.50 Aligned_cols=110 Identities=15% Similarity=0.220 Sum_probs=70.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcc-cHHHHHHcCceecCCCcCCHHhhhcc--CCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-SFAEARAAGFTEENGTLGDIYETISG--SDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sk-s~~~A~~~G~~~~d~t~~~~~Eav~~--ADIVILaVPd 188 (582)
++++|||+|++|.+++..+... ..|++++...+.++. ....+.-.|+.+.+ ..++++.+++ .|++++++|.
T Consensus 85 ~~V~IvGaG~lG~aLa~~~~~~----~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~--~~dL~~~v~~~~Id~vIIAvPs 158 (212)
T 3keo_A 85 TNVMLVGCGNIGRALLHYRFHD----RNKMQISMAFDLDSNDLVGKTTEDGIPVYG--ISTINDHLIDSDIETAILTVPS 158 (212)
T ss_dssp EEEEEECCSHHHHHHTTCCCCT----TSSEEEEEEEECTTSTTTTCBCTTCCBEEE--GGGHHHHC-CCSCCEEEECSCG
T ss_pred CEEEEECcCHHHHHHHHhhhcc----cCCeEEEEEEeCCchhccCceeECCeEEeC--HHHHHHHHHHcCCCEEEEecCc
Confidence 6899999999999999875311 127777666665544 33221124665421 3567777764 8999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEecc
Q 007987 189 AAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCP 237 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~P 237 (582)
....++.+.+...= =..++-|++- .+.+|+++.|--++.
T Consensus 159 ~~aq~v~d~lv~~G-Ik~I~nFap~---------~l~vp~~v~v~~vdl 197 (212)
T 3keo_A 159 TEAQEVADILVKAG-IKGILSFSPV---------HLTLPKDIIVQYVDL 197 (212)
T ss_dssp GGHHHHHHHHHHHT-CCEEEECSSS---------CCCCCTTSEEEECCH
T ss_pred hhHHHHHHHHHHcC-CCEEEEcCCc---------ccCCCCCcEEEEeCc
Confidence 88878887765431 1235666552 235678887776655
No 249
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.87 E-value=0.0031 Score=64.76 Aligned_cols=89 Identities=12% Similarity=0.180 Sum_probs=54.1
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHH--cCc------eecCCCcCCHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGF------TEENGTLGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~--~G~------~~~d~t~~~~~Eav~~ADI 181 (582)
+||+|||.|++|.+++..|... |+ ++++.+.+..+....+.+ .+. .. .. +..+++++||+
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~------~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i---~~-~~~~a~~~aDv 77 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALR------QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSL---YA-GDYSDVKDCDV 77 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEE---C---CGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEE---EE-CCHHHhCCCCE
Confidence 6899999999999999999887 66 676655543332222222 221 11 01 23567999999
Q ss_pred EEEeccchh----------------HHHHHHHHHhcCCCCcEEEEe
Q 007987 182 VLLLISDAA----------------QADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 182 VILaVPd~a----------------~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
||++++... ..++.+.|.++ .|+.+|+..
T Consensus 78 Vii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~ 122 (318)
T 1y6j_A 78 IVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKY-YNHGVILVV 122 (318)
T ss_dssp EEECCCC------CHHHHHHHHHHHHHHHHHHHHHH-CCSCEEEEC
T ss_pred EEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEe
Confidence 999887433 12334445555 567766544
No 250
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.85 E-value=0.0013 Score=66.81 Aligned_cols=77 Identities=19% Similarity=0.089 Sum_probs=55.5
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcC-----ceecCCCcCCHHhhhccCC
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAG-----FTEENGTLGDIYETISGSD 180 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G-----~~~~d~t~~~~~Eav~~AD 180 (582)
.++| +++.|+|.|-+|.+++..|.+. |. +|++.+|+.++..+.+.+.+ +........+..++++++|
T Consensus 124 ~l~~-k~vlVlGaGG~g~aia~~L~~~------G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~D 196 (283)
T 3jyo_A 124 NAKL-DSVVQVGAGGVGNAVAYALVTH------GVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAAD 196 (283)
T ss_dssp TCCC-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSS
T ss_pred CcCC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCC
Confidence 4678 9999999999999999999998 88 68888887555444444332 1100000236778888999
Q ss_pred eEEEeccchh
Q 007987 181 LVLLLISDAA 190 (582)
Q Consensus 181 IVILaVPd~a 190 (582)
+||.+||...
T Consensus 197 iVInaTp~Gm 206 (283)
T 3jyo_A 197 GVVNATPMGM 206 (283)
T ss_dssp EEEECSSTTS
T ss_pred EEEECCCCCC
Confidence 9999999643
No 251
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.84 E-value=0.0042 Score=63.40 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=44.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccH----HHHHH---cCc--eecCCCcCCHHhhhccCC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSF----AEARA---AGF--TEENGTLGDIYETISGSD 180 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~----~~A~~---~G~--~~~d~t~~~~~Eav~~AD 180 (582)
+||+|||.|++|.++|..|... |+ ++.+.++...+.. +.... .+. .. . ...+ .+++++||
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~------~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i-~-~t~d-~~a~~~aD 71 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKI-V-GGAD-YSLLKGSE 71 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEE-E-EESC-GGGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEE-E-EeCC-HHHhCCCC
Confidence 5899999999999999999988 76 7766665433221 11111 111 11 0 0234 78999999
Q ss_pred eEEEecc
Q 007987 181 LVLLLIS 187 (582)
Q Consensus 181 IVILaVP 187 (582)
+||++..
T Consensus 72 iVViaag 78 (294)
T 1oju_A 72 IIVVTAG 78 (294)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999874
No 252
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=96.81 E-value=0.0014 Score=66.84 Aligned_cols=86 Identities=9% Similarity=0.010 Sum_probs=56.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCc--ccHH---HHHHcCceecCCCcCCHHhhhcc--CCeEEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFA---EARAAGFTEENGTLGDIYETISG--SDLVLL 184 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~s--ks~~---~A~~~G~~~~d~t~~~~~Eav~~--ADIVIL 184 (582)
.+|||||+|.+|..++..| .. +++++...+.+. +..+ .+.+.|+.. ....+.++++++ .|+|++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l-~~------~~~lvav~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~~vD~V~I 73 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL-DE------ECSITGIAPGVPEEDLSKLEKAISEMNIKP--KKYNNWWEMLEKEKPDILVI 73 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC-CT------TEEEEEEECSSTTCCCHHHHHHHHTTTCCC--EECSSHHHHHHHHCCSEEEE
T ss_pred eEEEEEccchhHHHHHHhc-CC------CcEEEEEecCCchhhHHHHHHHHHHcCCCC--cccCCHHHHhcCCCCCEEEE
Confidence 5899999999999888777 44 676654343322 2222 223346521 126789998864 899999
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEE
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
++|+..+.++.... |+.|+-|.
T Consensus 74 ~tp~~~H~~~~~~a---l~aGkhVl 95 (337)
T 3ip3_A 74 NTVFSLNGKILLEA---LERKIHAF 95 (337)
T ss_dssp CSSHHHHHHHHHHH---HHTTCEEE
T ss_pred eCCcchHHHHHHHH---HHCCCcEE
Confidence 99999998776654 34565443
No 253
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.79 E-value=0.00058 Score=70.94 Aligned_cols=96 Identities=13% Similarity=0.078 Sum_probs=65.6
Q ss_pred cccCCCEEEEEccchh-HHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCC----c--CCHHhhhccC
Q 007987 107 AFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGT----L--GDIYETISGS 179 (582)
Q Consensus 107 ~l~gikkIgIIG~Gsm-G~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t----~--~~~~Eav~~A 179 (582)
.++| +++.|||.|.| |..+|+.|... |..|.+.+|+..+.++.+.+.+......+ . .++++.+++|
T Consensus 174 ~l~g-k~vvVIG~G~iVG~~~A~~L~~~------gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~A 246 (320)
T 1edz_A 174 RLYG-KKCIVINRSEIVGRPLAALLAND------GATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDS 246 (320)
T ss_dssp TTTT-CEEEEECCCTTTHHHHHHHHHTT------SCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHC
T ss_pred CCCC-CEEEEECCCcchHHHHHHHHHHC------CCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccC
Confidence 5788 99999999976 99999999988 88888887764444443333332110000 1 3578899999
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
|+||.+|+-... ++. ...+++|++|++.+-
T Consensus 247 DIVIsAtg~p~~--vI~--~e~vk~GavVIDVgi 276 (320)
T 1edz_A 247 DVVITGVPSENY--KFP--TEYIKEGAVCINFAC 276 (320)
T ss_dssp SEEEECCCCTTC--CBC--TTTSCTTEEEEECSS
T ss_pred CEEEECCCCCcc--eeC--HHHcCCCeEEEEcCC
Confidence 999999985321 121 234688988887763
No 254
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=96.77 E-value=0.001 Score=67.01 Aligned_cols=84 Identities=10% Similarity=0.139 Sum_probs=55.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccch
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd~ 189 (582)
.+|||||+|.||..++.+|.... ...+++++...+.+. .+.+.|+. ..+.+|+++ +.|+|++++|+.
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~--~~~~~~lvav~d~~~----~a~~~g~~-----~~~~~ell~~~~vD~V~i~tp~~ 76 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPR--SAAFLNLIGFVSRRE----LGSLDEVR-----QISLEDALRSQEIDVAYICSESS 76 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHH--HHTTEEEEEEECSSC----CCEETTEE-----BCCHHHHHHCSSEEEEEECSCGG
T ss_pred ceEEEEEEcHHHHHHHHHHhccc--cCCCEEEEEEECchH----HHHHcCCC-----CCCHHHHhcCCCCCEEEEeCCcH
Confidence 58999999999999999987520 011455432222211 12334554 468899886 679999999999
Q ss_pred hHHHHHHHHHhcCCCCcEEE
Q 007987 190 AQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
.+.++.... |+.|+-|.
T Consensus 77 ~H~~~~~~a---l~aGkhVl 93 (294)
T 1lc0_A 77 SHEDYIRQF---LQAGKHVL 93 (294)
T ss_dssp GHHHHHHHH---HHTTCEEE
T ss_pred hHHHHHHHH---HHCCCcEE
Confidence 997766643 34566443
No 255
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.76 E-value=0.0011 Score=69.09 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=65.9
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCcee---cCCCcCCHHhhhccCCeEE
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE---ENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~---~d~t~~~~~Eav~~ADIVI 183 (582)
.+++ ++|.|||.|.+|.+.++.++.. |.+|++.+++..+ .+.+.+.|... .+....+..+.++++|+||
T Consensus 164 ~l~~-~~VlViGaGgvG~~aa~~a~~~------Ga~V~v~dr~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI 235 (361)
T 1pjc_A 164 GVKP-GKVVILGGGVVGTEAAKMAVGL------GAQVQIFDINVER-LSYLETLFGSRVELLYSNSAEIETAVAEADLLI 235 (361)
T ss_dssp TBCC-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEE
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCHHH-HHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEE
Confidence 3677 9999999999999999999988 8888777765433 44444443210 0000123456778999999
Q ss_pred EeccchhH--HH-HHHHHHhcCCCCcEEEEec
Q 007987 184 LLISDAAQ--AD-NYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 184 LaVPd~a~--~~-Vl~eI~~~Lk~GaiL~~a~ 212 (582)
.+++.... .. +.++..+.|++|.+|++.+
T Consensus 236 ~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 236 GAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp ECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred ECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99975331 11 1345567789998887664
No 256
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.75 E-value=0.006 Score=62.99 Aligned_cols=70 Identities=17% Similarity=0.138 Sum_probs=46.2
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHH--HcC-------ceecCCCcCCHHhhhc
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEAR--AAG-------FTEENGTLGDIYETIS 177 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~--~~G-------~~~~d~t~~~~~Eav~ 177 (582)
++. +||+|||.|.||.++|..|... |+ ++++.+....+....+. ... ... ...+..++++
T Consensus 3 m~~-~kI~iiGaG~vG~~~a~~l~~~------~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v---~~t~d~~a~~ 72 (321)
T 3p7m_A 3 MAR-KKITLVGAGNIGGTLAHLALIK------QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKV---RGTNDYKDLE 72 (321)
T ss_dssp CCC-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCE---EEESCGGGGT
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHhC------CCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEE---EEcCCHHHHC
Confidence 344 8999999999999999999987 66 77666655443222221 111 111 0112357899
Q ss_pred cCCeEEEecc
Q 007987 178 GSDLVLLLIS 187 (582)
Q Consensus 178 ~ADIVILaVP 187 (582)
+||+||++..
T Consensus 73 ~aDvVIi~ag 82 (321)
T 3p7m_A 73 NSDVVIVTAG 82 (321)
T ss_dssp TCSEEEECCS
T ss_pred CCCEEEEcCC
Confidence 9999999864
No 257
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=96.74 E-value=0.0033 Score=64.37 Aligned_cols=80 Identities=10% Similarity=0.125 Sum_probs=57.4
Q ss_pred CEEEEEccchhHH-HHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhcc---CCeEEEecc
Q 007987 112 NQIGVIGWGSQGP-AQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG---SDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~-AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~---ADIVILaVP 187 (582)
.+|||||+|.||. .++..|+.. .+++++...+.+.+ ..|+.. ..+.++++++ .|+|++++|
T Consensus 26 ~rvgiiG~G~ig~~~~~~~l~~~-----~~~~lvav~d~~~~------~~g~~~----~~~~~~ll~~~~~vD~V~i~tp 90 (330)
T 4ew6_A 26 INLAIVGVGKIVRDQHLPSIAKN-----ANFKLVATASRHGT------VEGVNS----YTTIEAMLDAEPSIDAVSLCMP 90 (330)
T ss_dssp EEEEEECCSHHHHHTHHHHHHHC-----TTEEEEEEECSSCC------CTTSEE----ESSHHHHHHHCTTCCEEEECSC
T ss_pred ceEEEEecCHHHHHHHHHHHHhC-----CCeEEEEEEeCChh------hcCCCc----cCCHHHHHhCCCCCCEEEEeCC
Confidence 5899999999998 799998875 15665433333322 247664 6789998865 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEE
Q 007987 188 DAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+..+.++.... |+.|+-|.
T Consensus 91 ~~~H~~~~~~a---l~aGkhVl 109 (330)
T 4ew6_A 91 PQYRYEAAYKA---LVAGKHVF 109 (330)
T ss_dssp HHHHHHHHHHH---HHTTCEEE
T ss_pred cHHHHHHHHHH---HHcCCcEE
Confidence 99997776654 34566544
No 258
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=96.74 E-value=0.007 Score=61.96 Aligned_cols=161 Identities=14% Similarity=0.061 Sum_probs=94.8
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCccc---HHHHH-----HcCceecCCCcCCHHhhhccCCeE
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS---FAEAR-----AAGFTEENGTLGDIYETISGSDLV 182 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks---~~~A~-----~~G~~~~d~t~~~~~Eav~~ADIV 182 (582)
.||+|+| +|.||..+++.+.+. .+++++.+.+..... .+... ..|+.+ ..++++++.++|+|
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~-----~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v----~~dl~~ll~~aDVv 92 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRR-----KDVELCAVLVRKGSSFVDKDASILIGSDFLGVRI----TDDPESAFSNTEGI 92 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTC-----SSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBC----BSCHHHHTTSCSEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCCccccccchHHhhccCcCCcee----eCCHHHHhcCCCEE
Confidence 6899999 999999999998864 267765554442211 01111 234443 46889999999999
Q ss_pred EEeccchhHHHHHHHHHhcCCCCc-EEEEecCchhhhhhcccccCCCCCcEEEeccCCChhhH--HHHHhhcccccCCCc
Q 007987 183 LLLISDAAQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV--RRLYVQGKEINGAGI 259 (582)
Q Consensus 183 ILaVPd~a~~~Vl~eI~~~Lk~Ga-iL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~v--R~ly~~G~e~~G~Gv 259 (582)
|-.++|....+.+.... +.|. +|+-+.|++-...+. ....-+.+.+ ...||..--+. -++-+.-....+.+.
T Consensus 93 IDFT~p~a~~~~~~~~l---~~Gv~vViGTTG~~~e~~~~-L~~aa~~~~~-~~a~N~SiGv~ll~~l~~~aa~~l~~~~ 167 (288)
T 3ijp_A 93 LDFSQPQASVLYANYAA---QKSLIHIIGTTGFSKTEEAQ-IADFAKYTTI-VKSGNMSLGVNLLANLVKRAAKALDDDF 167 (288)
T ss_dssp EECSCHHHHHHHHHHHH---HHTCEEEECCCCCCHHHHHH-HHHHHTTSEE-EECSCCCHHHHHHHHHHHHHHHHSCTTS
T ss_pred EEcCCHHHHHHHHHHHH---HcCCCEEEECCCCCHHHHHH-HHHHhCcCCE-EEECCCcHHHHHHHHHHHHHHHhcCCCC
Confidence 99999887766555433 3454 344456875322211 0012234565 58899876551 011111000111222
Q ss_pred eE-EEeecc----C-CCHHHHHHHHHHHHHhCC
Q 007987 260 NS-SFAVHQ----D-VDGRATNVALGWSVALGS 286 (582)
Q Consensus 260 ~a-liAv~q----d-~tgeale~alala~aiG~ 286 (582)
.. ++-.|. | +||.|+.+++.+.++.|.
T Consensus 168 dieIiE~HH~~K~DaPSGTA~~la~~i~~~~~~ 200 (288)
T 3ijp_A 168 DIEIYEMHHANKVDSPSGTALLLGQAAAEGRNI 200 (288)
T ss_dssp EEEEEEEECTTCCCSSCHHHHHHHHHHHHHTTS
T ss_pred CEEEEEccCCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 22 233343 2 789999999999998885
No 259
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.70 E-value=0.0066 Score=62.81 Aligned_cols=72 Identities=19% Similarity=0.172 Sum_probs=46.6
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccH----HHHHHc-----CceecCCCcCCHHhh
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSF----AEARAA-----GFTEENGTLGDIYET 175 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~----~~A~~~-----G~~~~d~t~~~~~Ea 175 (582)
..++. +||+|||.|.+|.++|..|... |+ ++.+.+....+.. +..... ..... ...+. ++
T Consensus 3 ~~m~~-~kI~viGaG~vG~~~a~~l~~~------~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~--~t~d~-~a 72 (324)
T 3gvi_A 3 GSMAR-NKIALIGSGMIGGTLAHLAGLK------ELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFT--GANDY-AA 72 (324)
T ss_dssp ---CC-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE--EESSG-GG
T ss_pred CCCcC-CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEE--EeCCH-HH
Confidence 34555 8999999999999999999988 76 7776666544322 111110 11110 01344 78
Q ss_pred hccCCeEEEecc
Q 007987 176 ISGSDLVLLLIS 187 (582)
Q Consensus 176 v~~ADIVILaVP 187 (582)
+++||+||++..
T Consensus 73 ~~~aDiVIiaag 84 (324)
T 3gvi_A 73 IEGADVVIVTAG 84 (324)
T ss_dssp GTTCSEEEECCS
T ss_pred HCCCCEEEEccC
Confidence 999999999864
No 260
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.70 E-value=0.00086 Score=68.27 Aligned_cols=69 Identities=16% Similarity=0.156 Sum_probs=49.2
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
++| +++.|||.|-+|.+++..|.+. |. +|.|.+|+.++..+.+...+... ..+..+ + ++|+||.+|
T Consensus 120 ~~~-k~vlvlGaGGaaraia~~L~~~------G~~~v~v~nRt~~ka~~La~~~~~~~----~~~l~~-l-~~DivInaT 186 (282)
T 3fbt_A 120 IKN-NICVVLGSGGAARAVLQYLKDN------FAKDIYVVTRNPEKTSEIYGEFKVIS----YDELSN-L-KGDVIINCT 186 (282)
T ss_dssp CTT-SEEEEECSSTTHHHHHHHHHHT------TCSEEEEEESCHHHHHHHCTTSEEEE----HHHHTT-C-CCSEEEECS
T ss_pred ccC-CEEEEECCcHHHHHHHHHHHHc------CCCEEEEEeCCHHHHHHHHHhcCccc----HHHHHh-c-cCCEEEECC
Confidence 678 9999999999999999999998 88 88888886544333332221111 223334 4 799999999
Q ss_pred cch
Q 007987 187 SDA 189 (582)
Q Consensus 187 Pd~ 189 (582)
|..
T Consensus 187 p~G 189 (282)
T 3fbt_A 187 PKG 189 (282)
T ss_dssp STT
T ss_pred ccC
Confidence 864
No 261
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=96.70 E-value=0.0027 Score=66.77 Aligned_cols=66 Identities=23% Similarity=0.237 Sum_probs=49.9
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc-cCCeEEEe
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLL 185 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~-~ADIVILa 185 (582)
.|+| |+|+|+|+|++|...|+.|+.. |.+|++.+....+ .+.+.+.|... .+.+++.. ++|+++.+
T Consensus 172 ~L~G-ktV~I~G~GnVG~~~A~~l~~~------GakVvvsD~~~~~-~~~a~~~ga~~-----v~~~ell~~~~DIliP~ 238 (355)
T 1c1d_A 172 SLDG-LTVLVQGLGAVGGSLASLAAEA------GAQLLVADTDTER-VAHAVALGHTA-----VALEDVLSTPCDVFAPC 238 (355)
T ss_dssp CSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSCHHH-HHHHHHTTCEE-----CCGGGGGGCCCSEEEEC
T ss_pred CCCC-CEEEEECcCHHHHHHHHHHHHC------CCEEEEEeCCccH-HHHHHhcCCEE-----eChHHhhcCccceecHh
Confidence 6899 9999999999999999999988 9998765543222 44555667652 46667766 89998743
No 262
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.69 E-value=0.0025 Score=64.96 Aligned_cols=74 Identities=16% Similarity=0.208 Sum_probs=59.1
Q ss_pred ccCCCEEEEEccch-hHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 108 FNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 108 l~gikkIgIIG~Gs-mG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
++| +++.|||.|. +|..+|+.|... |..|.+..+. ..++++.+++||+||.++
T Consensus 148 l~G-k~vvVvG~s~iVG~plA~lL~~~------gAtVtv~~~~-------------------t~~L~~~~~~ADIVI~Av 201 (276)
T 3ngx_A 148 YHE-NTVTIVNRSPVVGRPLSMMLLNR------NYTVSVCHSK-------------------TKDIGSMTRSSKIVVVAV 201 (276)
T ss_dssp CCS-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHHSSEEEECS
T ss_pred cCC-CEEEEEcCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------cccHHHhhccCCEEEECC
Confidence 899 9999999985 899999999988 8888776532 246788999999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 187 SDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+-.. ++. ...+|+|++|++++
T Consensus 202 g~p~---~I~--~~~vk~GavVIDvg 222 (276)
T 3ngx_A 202 GRPG---FLN--REMVTPGSVVIDVG 222 (276)
T ss_dssp SCTT---CBC--GGGCCTTCEEEECC
T ss_pred CCCc---ccc--HhhccCCcEEEEec
Confidence 8532 222 24579999988775
No 263
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.66 E-value=0.0067 Score=62.14 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=43.5
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHH--cCceec--C-CCcCCHHhhhccCCeEEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGFTEE--N-GTLGDIYETISGSDLVLL 184 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~--~G~~~~--d-~t~~~~~Eav~~ADIVIL 184 (582)
+||+|||.|++|.+++..|... |+ ++.+.+.+..+....+.. .+.... + ....+..+++++||+||+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~~~------~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi 80 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLVNQ------SIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVI 80 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------CSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEE
Confidence 6999999999999999999877 64 555444332222111211 111000 0 001144678999999999
Q ss_pred eccc
Q 007987 185 LISD 188 (582)
Q Consensus 185 aVPd 188 (582)
+++.
T Consensus 81 ~ag~ 84 (317)
T 3d0o_A 81 CAGA 84 (317)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8853
No 264
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.66 E-value=0.0039 Score=64.29 Aligned_cols=68 Identities=21% Similarity=0.172 Sum_probs=45.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHH--c-------CceecCCCcCCHHhhhccCC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--A-------GFTEENGTLGDIYETISGSD 180 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~--~-------G~~~~d~t~~~~~Eav~~AD 180 (582)
+||+|||.|.||.++|..|... |+ ++++.+....+....+.+ + .... ...+..+++++||
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v---~~~~~~~a~~~aD 71 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ------DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRV---TGTNDYGPTEDSD 71 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEE---EEESSSGGGTTCS
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEE---EECCCHHHhCCCC
Confidence 5899999999999999999988 76 676666554332221111 1 1111 0124567899999
Q ss_pred eEEEeccc
Q 007987 181 LVLLLISD 188 (582)
Q Consensus 181 IVILaVPd 188 (582)
+||++.+.
T Consensus 72 vVii~ag~ 79 (314)
T 3nep_X 72 VCIITAGL 79 (314)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998753
No 265
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.65 E-value=0.0046 Score=64.06 Aligned_cols=70 Identities=20% Similarity=0.200 Sum_probs=44.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHH--HHcCceec--CCC-cCCHHhhhccCCeEEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEA--RAAGFTEE--NGT-LGDIYETISGSDLVLL 184 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A--~~~G~~~~--d~t-~~~~~Eav~~ADIVIL 184 (582)
+||+|||.|.+|.++|..|... |+ ++++.+....+....+ ...++... +-. ..+..+++++||+||+
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~------~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi 79 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQ------GITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCI 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEE
Confidence 7999999999999999999988 76 6665554322222211 12222110 000 1223468899999999
Q ss_pred ecc
Q 007987 185 LIS 187 (582)
Q Consensus 185 aVP 187 (582)
+..
T Consensus 80 ~ag 82 (326)
T 3pqe_A 80 CAG 82 (326)
T ss_dssp CCS
T ss_pred ecc
Confidence 874
No 266
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.65 E-value=0.005 Score=62.95 Aligned_cols=68 Identities=24% Similarity=0.205 Sum_probs=44.3
Q ss_pred EEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHc---------CceecCCCcCCHHhhhccCCeE
Q 007987 113 QIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAA---------GFTEENGTLGDIYETISGSDLV 182 (582)
Q Consensus 113 kIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~---------G~~~~d~t~~~~~Eav~~ADIV 182 (582)
||+|||.|+||.+++..|... |+ ++++.+....+....+.+. ..... ...+. +++++||+|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~------~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~--~t~d~-~a~~~aD~V 71 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMR------GYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRIS--GSNSY-EDMRGSDIV 71 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHH------TCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEE--EESCG-GGGTTCSEE
T ss_pred CEEEECcCHHHHHHHHHHHhC------CCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEE--ECCCH-HHhCCCCEE
Confidence 699999999999999999877 66 5666665543322212211 21110 01455 689999999
Q ss_pred EEeccch
Q 007987 183 LLLISDA 189 (582)
Q Consensus 183 ILaVPd~ 189 (582)
|++.+..
T Consensus 72 i~~ag~~ 78 (308)
T 2d4a_B 72 LVTAGIG 78 (308)
T ss_dssp EECCSCC
T ss_pred EEeCCCC
Confidence 9996643
No 267
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.61 E-value=0.0039 Score=63.84 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=59.4
Q ss_pred ccccCCCEEEEEccch-hHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 106 ~~l~gikkIgIIG~Gs-mG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
..++| +++.|||.|. +|..+|+.|... |..|.+..+. ..++++.+++||+||.
T Consensus 157 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 210 (285)
T 3l07_A 157 IKTEG-AYAVVVGASNVVGKPVSQLLLNA------KATVTTCHRF-------------------TTDLKSHTTKADILIV 210 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHhcccCCEEEE
Confidence 35899 9999999987 699999999988 8888776432 1367788999999999
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+++-.. ++. ...+|+|++|++++
T Consensus 211 Avg~p~---~I~--~~~vk~GavVIDvg 233 (285)
T 3l07_A 211 AVGKPN---FIT--ADMVKEGAVVIDVG 233 (285)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECC
T ss_pred CCCCCC---CCC--HHHcCCCcEEEEec
Confidence 998422 122 24579999988775
No 268
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.61 E-value=0.0038 Score=64.62 Aligned_cols=95 Identities=15% Similarity=0.158 Sum_probs=59.0
Q ss_pred ccccCC-CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCcee-cCCCcCC---HHhhhccCC
Q 007987 106 DAFNGI-NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTLGD---IYETISGSD 180 (582)
Q Consensus 106 ~~l~gi-kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~-~d~t~~~---~~Eav~~AD 180 (582)
+.++|. |||.|||+|.+|..++..|.+. .+|.++++.. +..+++.+..-.. .| +.+ +.++++++|
T Consensus 10 ~~~~g~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~-~~~~~~~~~~~~~~~d--~~d~~~l~~~~~~~D 79 (365)
T 3abi_A 10 HHIEGRHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNN-ENLEKVKEFATPLKVD--ASNFDKLVEVMKEFE 79 (365)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCH-HHHHHHTTTSEEEECC--TTCHHHHHHHHTTCS
T ss_pred ccccCCccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCH-HHHHHHhccCCcEEEe--cCCHHHHHHHHhCCC
Confidence 345553 5899999999999999998653 5777776643 3344443322111 01 223 456789999
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
+||.++|+.....+.+.. ++.|+-+++.++
T Consensus 80 vVi~~~p~~~~~~v~~~~---~~~g~~yvD~s~ 109 (365)
T 3abi_A 80 LVIGALPGFLGFKSIKAA---IKSKVDMVDVSF 109 (365)
T ss_dssp EEEECCCGGGHHHHHHHH---HHHTCEEEECCC
T ss_pred EEEEecCCcccchHHHHH---HhcCcceEeeec
Confidence 999999999877776642 334665665554
No 269
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.60 E-value=0.0029 Score=68.46 Aligned_cols=76 Identities=18% Similarity=0.164 Sum_probs=50.0
Q ss_pred CEEEEEccchh--HHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc---------CceecCCCcCCHHhhhccCC
Q 007987 112 NQIGVIGWGSQ--GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA---------GFTEENGTLGDIYETISGSD 180 (582)
Q Consensus 112 kkIgIIG~Gsm--G~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~---------G~~~~d~t~~~~~Eav~~AD 180 (582)
+||+|||.|+| |.+++..|...- .-.| +|++.+....+ .+..... .+.. ..|.++++++||
T Consensus 6 ~KIaVIGaGs~g~g~~la~~l~~~~--~~~g-eV~L~Di~~e~-le~~~~~~~~l~~~~~~I~~----TtD~~eAl~dAD 77 (450)
T 3fef_A 6 IKIAYIGGGSQGWARSLMSDLSIDE--RMSG-TVALYDLDFEA-AQKNEVIGNHSGNGRWRYEA----VSTLKKALSAAD 77 (450)
T ss_dssp EEEEEETTTCSSHHHHHHHHHHHCS--SCCE-EEEEECSSHHH-HHHHHHHHTTSTTSCEEEEE----ESSHHHHHTTCS
T ss_pred CEEEEECCChhHhHHHHHHHHHhcc--ccCC-eEEEEeCCHHH-HHHHHHHHHHHhccCCeEEE----ECCHHHHhcCCC
Confidence 69999999998 688988887630 0015 77666554322 2222211 1221 467889999999
Q ss_pred eEEEeccchhHHHHH
Q 007987 181 LVLLLISDAAQADNY 195 (582)
Q Consensus 181 IVILaVPd~a~~~Vl 195 (582)
+||+++++.......
T Consensus 78 fVI~airvG~~~~~~ 92 (450)
T 3fef_A 78 IVIISILPGSLDDME 92 (450)
T ss_dssp EEEECCCSSCHHHHH
T ss_pred EEEeccccCCcccch
Confidence 999999987665433
No 270
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=96.58 E-value=0.0082 Score=62.40 Aligned_cols=94 Identities=16% Similarity=0.138 Sum_probs=59.3
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEec-CCcccHHHHHHcCceecCC-------------CcCCHHhhhc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTEENG-------------TLGDIYETIS 177 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r-~~sks~~~A~~~G~~~~d~-------------t~~~~~Eav~ 177 (582)
.||||||+|.||..+++.|.+. .+++++...+ ........+...|+....+ ...+.+++.+
T Consensus 2 ikVgIiGaG~iG~~~~r~L~~~-----p~~elvav~d~~~~~~~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~ 76 (340)
T 1b7g_O 2 VNVAVNGYGTIGKRVADAIIKQ-----PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIK 76 (340)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHH
T ss_pred eEEEEEecCHHHHHHHHHHHcC-----CCCEEEEEEcCChHHHHHHHHhcCcceecCcCHHHHhcccccccccCHhHhhc
Confidence 5899999999999999998765 1456543333 3233345555556542100 0113345556
Q ss_pred cCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 178 ~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
++|+||.++|.....+..+.. ++.|..+++.++
T Consensus 77 ~vDvV~~aTp~~~s~~~a~~~---~~aG~kvV~~sa 109 (340)
T 1b7g_O 77 TSDIVVDTTPNGVGAQYKPIY---LQLQRNAIFQGG 109 (340)
T ss_dssp HCSEEEECCSTTHHHHHHHHH---HHTTCEEEECTT
T ss_pred CCCEEEECCCCchhHHHHHHH---HHcCCeEEEeCC
Confidence 899999999998887766543 345665555544
No 271
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.56 E-value=0.0026 Score=64.18 Aligned_cols=69 Identities=16% Similarity=0.171 Sum_probs=53.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEecc
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVP 187 (582)
.+ +++.|||.|-+|.+++..|.+. |. +|.|.+|+.++..+.+.+.|... ..+.. +.++|+||.+||
T Consensus 118 ~~-~~vlvlGaGgaarav~~~L~~~------G~~~i~v~nRt~~ka~~la~~~~~~~----~~~~~--~~~~DivInaTp 184 (271)
T 1npy_A 118 KN-AKVIVHGSGGMAKAVVAAFKNS------GFEKLKIYARNVKTGQYLAALYGYAY----INSLE--NQQADILVNVTS 184 (271)
T ss_dssp TT-SCEEEECSSTTHHHHHHHHHHT------TCCCEEEECSCHHHHHHHHHHHTCEE----ESCCT--TCCCSEEEECSS
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCEEEEEeCCHHHHHHHHHHcCCcc----chhhh--cccCCEEEECCC
Confidence 46 8999999999999999999998 87 78888887666666666666432 11222 468999999999
Q ss_pred chh
Q 007987 188 DAA 190 (582)
Q Consensus 188 d~a 190 (582)
...
T Consensus 185 ~gm 187 (271)
T 1npy_A 185 IGM 187 (271)
T ss_dssp TTC
T ss_pred CCc
Confidence 765
No 272
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.55 E-value=0.0053 Score=63.91 Aligned_cols=69 Identities=25% Similarity=0.241 Sum_probs=43.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHH--HcC--ceecCC--CcCCHHhhhccCCeEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAG--FTEENG--TLGDIYETISGSDLVL 183 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~--~~G--~~~~d~--t~~~~~Eav~~ADIVI 183 (582)
+||+|||.|.||.++|..|... |+ ++++.+....+....+. .++ +..... ...+.++ +++||+||
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~------g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-~~daDiVI 94 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMK------DLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-SAGSKLVV 94 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHH------CCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-CSSCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-hCCCCEEE
Confidence 8999999999999999999988 76 66655543322222111 111 110000 0235554 89999999
Q ss_pred Eecc
Q 007987 184 LLIS 187 (582)
Q Consensus 184 LaVP 187 (582)
++..
T Consensus 95 itaG 98 (330)
T 3ldh_A 95 ITAG 98 (330)
T ss_dssp ECCS
T ss_pred EeCC
Confidence 9853
No 273
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.52 E-value=0.0032 Score=68.20 Aligned_cols=97 Identities=18% Similarity=0.212 Sum_probs=60.1
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcC---CHHhhhccCCeE
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG---DIYETISGSDLV 182 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~---~~~Eav~~ADIV 182 (582)
..+++ ++|.|||+|.+|.+++..|.+. .|.+|++..|+.++..+.+...++......+. +..++++++|+|
T Consensus 19 ~~l~~-k~VlIiGAGgiG~aia~~L~~~-----~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvV 92 (467)
T 2axq_A 19 GRHMG-KNVLLLGSGFVAQPVIDTLAAN-----DDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVV 92 (467)
T ss_dssp ----C-EEEEEECCSTTHHHHHHHHHTS-----TTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEE
T ss_pred cCCCC-CEEEEECChHHHHHHHHHHHhC-----CCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEE
Confidence 34567 8999999999999999999875 14688888876444334333334321000122 345677899999
Q ss_pred EEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 183 LLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 183 ILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
|.++|......+... .+++|..+.+.
T Consensus 93 In~tp~~~~~~v~~a---~l~~g~~vvd~ 118 (467)
T 2axq_A 93 ISLIPYTFHPNVVKS---AIRTKTDVVTS 118 (467)
T ss_dssp EECSCGGGHHHHHHH---HHHHTCEEEEC
T ss_pred EECCchhhhHHHHHH---HHhcCCEEEEe
Confidence 999998866554432 23345555444
No 274
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=96.51 E-value=0.0069 Score=62.29 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=44.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHH--cC------ceecCCCcCCHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~--~G------~~~~d~t~~~~~Eav~~ADI 181 (582)
+||+|||.|++|.+++..|... ++ ++++.+....+....+.+ .. +.. ..+..+++++||+
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v----~~~~~~a~~~aDv 75 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ------GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKI----YSGEYSDCKDADL 75 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEE----EECCGGGGTTCSE
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEE----EECCHHHhCCCCE
Confidence 6999999999999999999887 65 666555532222222222 11 111 1234678999999
Q ss_pred EEEeccch
Q 007987 182 VLLLISDA 189 (582)
Q Consensus 182 VILaVPd~ 189 (582)
||++.+..
T Consensus 76 Vii~ag~~ 83 (318)
T 1ez4_A 76 VVITAGAP 83 (318)
T ss_dssp EEECCCC-
T ss_pred EEECCCCC
Confidence 99998643
No 275
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=96.51 E-value=0.0072 Score=62.38 Aligned_cols=68 Identities=15% Similarity=0.174 Sum_probs=45.0
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHH--cCc------eecCCCcCCHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AGF------TEENGTLGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~--~G~------~~~d~t~~~~~Eav~~ADI 181 (582)
+||+|||.|++|.+++..|... ++ ++++.+....+....+.+ ... .. ..+..+++++||+
T Consensus 10 ~KI~IiGaG~vG~~la~~l~~~------~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i----~~~~~~a~~~aDv 79 (326)
T 2zqz_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKI----YSAEYSDAKDADL 79 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEE----EECCGGGGGGCSE
T ss_pred CEEEEECCCHHHHHHHHHHHcC------CCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEE----EECCHHHhCCCCE
Confidence 7999999999999999999877 54 665555432222222221 221 11 1234678999999
Q ss_pred EEEeccch
Q 007987 182 VLLLISDA 189 (582)
Q Consensus 182 VILaVPd~ 189 (582)
||++.+..
T Consensus 80 Vii~ag~~ 87 (326)
T 2zqz_A 80 VVITAGAP 87 (326)
T ss_dssp EEECCCCC
T ss_pred EEEcCCCC
Confidence 99988643
No 276
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.51 E-value=0.0031 Score=64.57 Aligned_cols=76 Identities=18% Similarity=0.132 Sum_probs=59.6
Q ss_pred ccccCCCEEEEEccch-hHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 106 ~~l~gikkIgIIG~Gs-mG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
..++| +++.|||.|. .|..+|+.|... |..|.+..+. ..++++.+++||+||.
T Consensus 156 i~l~G-k~vvVvGrs~iVG~p~A~lL~~~------gAtVtv~h~~-------------------t~~L~~~~~~ADIVI~ 209 (285)
T 3p2o_A 156 IDLEG-KDAVIIGASNIVGRPMATMLLNA------GATVSVCHIK-------------------TKDLSLYTRQADLIIV 209 (285)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhhcCCEEEE
Confidence 45899 9999999987 699999999988 8888776532 1367788999999999
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+++-.. ++. ...+|+|++|++++
T Consensus 210 Avg~p~---~I~--~~~vk~GavVIDVg 232 (285)
T 3p2o_A 210 AAGCVN---LLR--SDMVKEGVIVVDVG 232 (285)
T ss_dssp CSSCTT---CBC--GGGSCTTEEEEECC
T ss_pred CCCCCC---cCC--HHHcCCCeEEEEec
Confidence 998422 222 35679999988775
No 277
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.51 E-value=0.0031 Score=65.02 Aligned_cols=76 Identities=13% Similarity=0.118 Sum_probs=58.8
Q ss_pred ccccCCCEEEEEccch-hHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHH--hhhccCCeE
Q 007987 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY--ETISGSDLV 182 (582)
Q Consensus 106 ~~l~gikkIgIIG~Gs-mG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~--Eav~~ADIV 182 (582)
..++| +++.|||.|. +|..+|+.|... |..|.+..+.. .+++ +.+++||+|
T Consensus 161 i~l~G-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~~~~T-------------------~~l~l~~~~~~ADIV 214 (300)
T 4a26_A 161 IEMAG-KRAVVLGRSNIVGAPVAALLMKE------NATVTIVHSGT-------------------STEDMIDYLRTADIV 214 (300)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTTS-------------------CHHHHHHHHHTCSEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHHC------CCeEEEEeCCC-------------------CCchhhhhhccCCEE
Confidence 45899 9999999987 799999999998 88888776521 1334 789999999
Q ss_pred EEeccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 183 ILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
|.+++-.. ++. ...+|+|++|++++
T Consensus 215 I~Avg~p~---~I~--~~~vk~GavVIDvg 239 (300)
T 4a26_A 215 IAAMGQPG---YVK--GEWIKEGAAVVDVG 239 (300)
T ss_dssp EECSCCTT---CBC--GGGSCTTCEEEECC
T ss_pred EECCCCCC---CCc--HHhcCCCcEEEEEe
Confidence 99999532 222 24579999988775
No 278
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=96.43 E-value=0.0086 Score=62.05 Aligned_cols=98 Identities=16% Similarity=0.203 Sum_probs=57.7
Q ss_pred CCEEEEEccchhHHHHHHHHHHh---hhhhcCCceEEEEecCC-ccc----HH--HHHHc--CceecCCCcCCHHhhhc-
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVKVGLRKG-SRS----FA--EARAA--GFTEENGTLGDIYETIS- 177 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds---~~~~g~G~~ViVg~r~~-sks----~~--~A~~~--G~~~~d~t~~~~~Eav~- 177 (582)
|.+|||||+|.||..+++.|.+. +...|.+++++...+.+ .+. .. .+... +... + ..+.+++++
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~~~~~~~~~-~--~~d~~~ll~~ 78 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRMKRETGMLR-D--DAKAIEVVRS 78 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHHHHHHSSCS-B--CCCHHHHHHH
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhhhccCcccc-C--CCCHHHHhcC
Confidence 57999999999999999998764 22233466654333322 211 11 11111 2110 0 127888875
Q ss_pred -cCCeEEEeccchhH-HHHHHHHHhcCCCCcEEEEe
Q 007987 178 -GSDLVLLLISDAAQ-ADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 178 -~ADIVILaVPd~a~-~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+.|+|+.++|+..+ .+.++-+...|+.|+-|+..
T Consensus 79 ~~iDvVv~~tp~~~h~~~a~~~~~~aL~aGkhVv~~ 114 (327)
T 3do5_A 79 ADYDVLIEASVTRVDGGEGVNYIREALKRGKHVVTS 114 (327)
T ss_dssp SCCSEEEECCCCC----CHHHHHHHHHTTTCEEEEC
T ss_pred CCCCEEEECCCCcccchhHHHHHHHHHHCCCeEEec
Confidence 58999999999875 22334455667788876655
No 279
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=96.43 E-value=0.0082 Score=62.29 Aligned_cols=96 Identities=16% Similarity=0.217 Sum_probs=59.6
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEec-CCcccHHHHHHcCceec------------CCC-c-CCHHhh
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-KGSRSFAEARAAGFTEE------------NGT-L-GDIYET 175 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r-~~sks~~~A~~~G~~~~------------d~t-~-~~~~Ea 175 (582)
|.||||||+|.+|..+++.|... .+++++...+ ....+...+...|+..- .+. + .+.+++
T Consensus 1 mikVgIiGaG~iG~~l~r~L~~~-----~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~l~v~~~~~~~ 75 (337)
T 1cf2_P 1 MKAVAINGYGTVGKRVADAIAQQ-----DDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM 75 (337)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH
T ss_pred CeEEEEEeECHHHHHHHHHHHcC-----CCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCceEEcCCHHHH
Confidence 36899999999999999998763 1566543333 22222233443321100 000 1 245666
Q ss_pred hccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 176 v~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
..++|+||.++|.....+..+... +.|+.|++.++-
T Consensus 76 ~~~vDvV~~atp~~~~~~~a~~~l---~aG~~VId~sp~ 111 (337)
T 1cf2_P 76 LDEADIVIDCTPEGIGAKNLKMYK---EKGIKAIFQGGE 111 (337)
T ss_dssp HHTCSEEEECCSTTHHHHHHHHHH---HHTCCEEECTTS
T ss_pred hcCCCEEEECCCchhhHHHHHHHH---HcCCEEEEecCC
Confidence 778999999999998877666443 346667766654
No 280
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.34 E-value=0.0059 Score=63.06 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=53.1
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecC---CcccHHHHHHc----CceecCCCcCC---HHhh
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARAA----GFTEENGTLGD---IYET 175 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~---~sks~~~A~~~----G~~~~d~t~~~---~~Ea 175 (582)
.++| +++.|+|.|-+|.+++..|.+. |. +|++..|+ ..+..+.+.+. |....-....+ +.+.
T Consensus 151 ~l~g-k~~lVlGaGG~g~aia~~L~~~------Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (315)
T 3tnl_A 151 DIIG-KKMTICGAGGAATAICIQAALD------GVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKE 223 (315)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred CccC-CEEEEECCChHHHHHHHHHHHC------CCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhh
Confidence 4678 9999999999999999999998 98 78888887 33333333322 21110000222 3456
Q ss_pred hccCCeEEEeccchhH
Q 007987 176 ISGSDLVLLLISDAAQ 191 (582)
Q Consensus 176 v~~ADIVILaVPd~a~ 191 (582)
+.++|+||.+||....
T Consensus 224 l~~aDiIINaTp~Gm~ 239 (315)
T 3tnl_A 224 IAESVIFTNATGVGMK 239 (315)
T ss_dssp HHTCSEEEECSSTTST
T ss_pred hcCCCEEEECccCCCC
Confidence 7889999999996543
No 281
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=96.30 E-value=0.0052 Score=63.38 Aligned_cols=77 Identities=18% Similarity=0.164 Sum_probs=53.2
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecC---CcccHHHHHHc----CceecCCCcCCH---Hhh
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK---GSRSFAEARAA----GFTEENGTLGDI---YET 175 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~---~sks~~~A~~~----G~~~~d~t~~~~---~Ea 175 (582)
.++| +++.|+|.|-+|.+++..|.+. |. +|.|.+|+ ..+..+.+.+. +....-....+. .+.
T Consensus 145 ~l~g-k~~lVlGAGGaaraia~~L~~~------G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~ 217 (312)
T 3t4e_A 145 DMRG-KTMVLLGAGGAATAIGAQAAIE------GIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEA 217 (312)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred CcCC-CEEEEECcCHHHHHHHHHHHHc------CCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhh
Confidence 3678 9999999999999999999998 88 78888887 33333333322 211000002233 456
Q ss_pred hccCCeEEEeccchh
Q 007987 176 ISGSDLVLLLISDAA 190 (582)
Q Consensus 176 v~~ADIVILaVPd~a 190 (582)
+.++|+||.+||...
T Consensus 218 l~~~DiIINaTp~Gm 232 (312)
T 3t4e_A 218 LASADILTNGTKVGM 232 (312)
T ss_dssp HHHCSEEEECSSTTS
T ss_pred ccCceEEEECCcCCC
Confidence 788999999999764
No 282
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.29 E-value=0.006 Score=65.58 Aligned_cols=80 Identities=20% Similarity=0.141 Sum_probs=51.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcC-ceecCCCcC---CHHhhhccCCeEEE
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLG---DIYETISGSDLVLL 184 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G-~~~~d~t~~---~~~Eav~~ADIVIL 184 (582)
++ ++|.|||.|.+|.+++..|.+. |.+|++..|+.++..+.+...+ +......+. +..++++++|+||.
T Consensus 2 ~~-k~VlViGaG~iG~~ia~~L~~~------G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn 74 (450)
T 1ff9_A 2 AT-KSVLMLGSGFVTRPTLDVLTDS------GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVIS 74 (450)
T ss_dssp CC-CEEEEECCSTTHHHHHHHHHTT------TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHhC------cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEE
Confidence 35 8999999999999999999988 8888887775333222222222 210000123 34467789999999
Q ss_pred eccchhHHHHH
Q 007987 185 LISDAAQADNY 195 (582)
Q Consensus 185 aVPd~a~~~Vl 195 (582)
++|...+..+.
T Consensus 75 ~a~~~~~~~i~ 85 (450)
T 1ff9_A 75 LIPYTFHATVI 85 (450)
T ss_dssp CCC--CHHHHH
T ss_pred CCccccchHHH
Confidence 99987665443
No 283
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=96.24 E-value=0.0072 Score=61.85 Aligned_cols=67 Identities=21% Similarity=0.175 Sum_probs=43.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHH--cC------ceecCCCcCCHHhhhccCCe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARA--AG------FTEENGTLGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~--~G------~~~~d~t~~~~~Eav~~ADI 181 (582)
+||+|||.|++|.+++..|... ++ ++++.+....+....+.+ .. +.. +. +..+++++||+
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v---~~-~~~~a~~~aD~ 70 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALL------GVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWV---WA-GSYGDLEGARA 70 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEE---EE-CCGGGGTTEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEE---EE-CCHHHhCCCCE
Confidence 5899999999999999998877 53 565555543222222222 11 111 01 23678999999
Q ss_pred EEEeccc
Q 007987 182 VLLLISD 188 (582)
Q Consensus 182 VILaVPd 188 (582)
||++.+.
T Consensus 71 Vii~ag~ 77 (310)
T 2xxj_A 71 VVLAAGV 77 (310)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9998753
No 284
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=96.22 E-value=0.023 Score=59.26 Aligned_cols=92 Identities=20% Similarity=0.128 Sum_probs=57.9
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccH-HH--------------------HHHcCceecCCCcC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AE--------------------ARAAGFTEENGTLG 170 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~-~~--------------------A~~~G~~~~d~t~~ 170 (582)
.||||+|+|.+|+.+++.|... .+++++...+...... .. ....++.+ -.
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~-----~~~evvaV~d~~~~~~~~l~~~dg~s~~g~~~~~~~v~~~~~~~l~v----~~ 73 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQ-----DDMEVIGVTKTKPDFEARLAVEKGYKLFVAIPDNERVKLFEDAGIPV----EG 73 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEEESSCSHHHHHHHHTTCCEEESSCCHHHHHHHHHTTCCC----CC
T ss_pred eEEEEECCCHHHHHHHHHHHhC-----CCceEEEEecCCHHHHHHHHHhcCCccccccCCCceeecccCCeEEE----CC
Confidence 5899999999999999998764 1466543332211111 11 12223322 12
Q ss_pred CHHhhhccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 171 DIYETISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 171 ~~~Eav~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
+..+...++|+|+.++|.....+..+ ..+++.|+.|+++++.
T Consensus 74 ~~~~~~~~vDiV~eatg~~~s~~~a~--~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 74 TILDIIEDADIVVDGAPKKIGKQNLE--NIYKPHKVKAILQGGE 115 (343)
T ss_dssp BGGGTGGGCSEEEECCCTTHHHHHHH--HTTTTTTCEEEECTTS
T ss_pred chHHhccCCCEEEECCCccccHHHHH--HHHHHCCCEEEECCCc
Confidence 34455578999999999877655444 4678889887776654
No 285
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.20 E-value=0.014 Score=60.58 Aligned_cols=70 Identities=14% Similarity=0.153 Sum_probs=44.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHH--HcCcee-cCC-CcCCHHhhhccCCeEEEe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAGFTE-ENG-TLGDIYETISGSDLVLLL 185 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~--~~G~~~-~d~-t~~~~~Eav~~ADIVILa 185 (582)
+||+|||.|.+|.++|..|... |+ ++++.+....+....+. .+.... .+- ...+..+++++||+||++
T Consensus 10 ~kV~ViGaG~vG~~~a~~l~~~------~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ 83 (326)
T 3vku_A 10 QKVILVGDGAVGSSYAYAMVLQ------GIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVIT 83 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEEC
Confidence 8999999999999999999988 76 66655543222221111 111100 000 012345789999999998
Q ss_pred cc
Q 007987 186 IS 187 (582)
Q Consensus 186 VP 187 (582)
..
T Consensus 84 ag 85 (326)
T 3vku_A 84 AG 85 (326)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 286
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.19 E-value=0.0097 Score=60.94 Aligned_cols=76 Identities=21% Similarity=0.171 Sum_probs=59.1
Q ss_pred ccccCCCEEEEEccch-hHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 106 ~~l~gikkIgIIG~Gs-mG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
..++| +++.|||.|. .|..+|+.|... |..|.+..+. ..++++.+++||+||.
T Consensus 157 i~l~G-k~vvVvGrs~iVG~plA~lL~~~------gAtVtv~hs~-------------------T~~L~~~~~~ADIVI~ 210 (286)
T 4a5o_A 157 ADLYG-MDAVVVGASNIVGRPMALELLLG------GCTVTVTHRF-------------------TRDLADHVSRADLVVV 210 (286)
T ss_dssp CCCTT-CEEEEECTTSTTHHHHHHHHHHT------TCEEEEECTT-------------------CSCHHHHHHTCSEEEE
T ss_pred CCCCC-CEEEEECCCchhHHHHHHHHHHC------CCeEEEEeCC-------------------CcCHHHHhccCCEEEE
Confidence 35789 9999999986 899999999988 8888776432 1356788999999999
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+++-.. ++. ...+|+|++|++++
T Consensus 211 Avg~p~---~I~--~~~vk~GavVIDvg 233 (286)
T 4a5o_A 211 AAGKPG---LVK--GEWIKEGAIVIDVG 233 (286)
T ss_dssp CCCCTT---CBC--GGGSCTTCEEEECC
T ss_pred CCCCCC---CCC--HHHcCCCeEEEEec
Confidence 998422 222 35579999998875
No 287
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.18 E-value=0.013 Score=58.04 Aligned_cols=87 Identities=18% Similarity=0.210 Sum_probs=56.8
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCC-------------------cccHHHHHHc----
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARAA---- 160 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~-------------------sks~~~A~~~---- 160 (582)
...|++ ++|.|||+|.+|..++++|... |+ ++.+.++.. .+....++..
T Consensus 26 q~~l~~-~~VlVvG~Gg~G~~va~~La~~------Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n 98 (249)
T 1jw9_B 26 QEALKD-SRVLIVGLGGLGCAASQYLASA------GVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN 98 (249)
T ss_dssp HHHHHH-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhC-CeEEEEeeCHHHHHHHHHHHHc------CCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHC
Confidence 466788 9999999999999999999998 87 666665543 2322222221
Q ss_pred -Cceec--CCCcC--CHHhhhccCCeEEEeccchhHHHHHHHH
Q 007987 161 -GFTEE--NGTLG--DIYETISGSDLVLLLISDAAQADNYEKI 198 (582)
Q Consensus 161 -G~~~~--d~t~~--~~~Eav~~ADIVILaVPd~a~~~Vl~eI 198 (582)
++... ..... +..+.++++|+||.++++......+.+.
T Consensus 99 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~ 141 (249)
T 1jw9_B 99 PHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAG 141 (249)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHH
T ss_pred CCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHH
Confidence 22110 11111 2346788999999999876655555544
No 288
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.17 E-value=0.0064 Score=64.23 Aligned_cols=95 Identities=13% Similarity=0.107 Sum_probs=61.0
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCC---ceEEEEecCCcccHHHHHHcC------ceecCCCcC---CHHhhhcc
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSD---IVVKVGLRKGSRSFAEARAAG------FTEENGTLG---DIYETISG 178 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G---~~ViVg~r~~sks~~~A~~~G------~~~~d~t~~---~~~Eav~~ 178 (582)
|++|+|||+|.+|.++++.|.+. | .+|++..|+..+..+.+.+.+ +......+. ++++++++
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~------g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~ 74 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN------REVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE 74 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC------TTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------CCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh
Confidence 57999999999999999999887 6 277777776544444443321 211000022 34567777
Q ss_pred --CCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 179 --SDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 179 --ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
.|+||.++|+.....+.+.. ++.|..+++.+++
T Consensus 75 ~~~DvVin~ag~~~~~~v~~a~---l~~g~~vvD~a~~ 109 (405)
T 4ina_A 75 VKPQIVLNIALPYQDLTIMEAC---LRTGVPYLDTANY 109 (405)
T ss_dssp HCCSEEEECSCGGGHHHHHHHH---HHHTCCEEESSCC
T ss_pred hCCCEEEECCCcccChHHHHHH---HHhCCCEEEecCC
Confidence 89999999988766666543 2345556655443
No 289
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.13 E-value=0.011 Score=60.83 Aligned_cols=66 Identities=21% Similarity=0.185 Sum_probs=43.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCC--cccHHHHH----Hc-----CceecCCCcCCHHhhhccC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG--SRSFAEAR----AA-----GFTEENGTLGDIYETISGS 179 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~--sks~~~A~----~~-----G~~~~d~t~~~~~Eav~~A 179 (582)
+||+|||.|.||.++|..|... |+ ++++.++.. .+....+. .. .... ...+..+++++|
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~------g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i---~~t~d~~a~~~a 79 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK------ELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANI---IGTSDYADTADS 79 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCE---EEESCGGGGTTC
T ss_pred CEEEEECCCHHHHHHHHHHHhC------CCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEE---EEcCCHHHhCCC
Confidence 7999999999999999999988 87 776666542 11111111 10 1111 012235788999
Q ss_pred CeEEEec
Q 007987 180 DLVLLLI 186 (582)
Q Consensus 180 DIVILaV 186 (582)
|+||++.
T Consensus 80 DvVIiaa 86 (315)
T 3tl2_A 80 DVVVITA 86 (315)
T ss_dssp SEEEECC
T ss_pred CEEEEeC
Confidence 9999987
No 290
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.11 E-value=0.013 Score=63.48 Aligned_cols=86 Identities=21% Similarity=0.206 Sum_probs=55.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEE-ecCCcccHHHHHHc-C----------------------ceecCC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVG-LRKGSRSFAEARAA-G----------------------FTEENG 167 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg-~r~~sks~~~A~~~-G----------------------~~~~d~ 167 (582)
.+|||||+|.||..++..+... .+++++.. +++..+..+.+.+. | ...
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~-----~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~~v--- 95 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARM-----QGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKIAV--- 95 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTS-----SSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCEEE---
T ss_pred eEEEEECChHHHHHHHHHHhhC-----CCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCceE---
Confidence 5799999999999999888754 25665443 33333333333333 5 111
Q ss_pred CcCCHHhhhc--cCCeEEEeccch-hHHHHHHHHHhcCCCCcEEE
Q 007987 168 TLGDIYETIS--GSDLVLLLISDA-AQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 168 t~~~~~Eav~--~ADIVILaVPd~-a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
..|.+++++ +.|+|+++||+. .+.++.. ..|+.|+-|+
T Consensus 96 -~~D~eeLL~d~dIDaVviaTp~p~~H~e~a~---~AL~AGKHVv 136 (446)
T 3upl_A 96 -TDDNDLILSNPLIDVIIDATGIPEVGAETGI---AAIRNGKHLV 136 (446)
T ss_dssp -ESCHHHHHTCTTCCEEEECSCCHHHHHHHHH---HHHHTTCEEE
T ss_pred -ECCHHHHhcCCCCCEEEEcCCChHHHHHHHH---HHHHcCCcEE
Confidence 468888886 489999999864 3444333 3455677655
No 291
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=96.10 E-value=0.011 Score=59.64 Aligned_cols=161 Identities=14% Similarity=0.118 Sum_probs=89.3
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCccc---HHHHHHc-----CceecCCCcCCHHhhhccCCeE
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS---FAEARAA-----GFTEENGTLGDIYETISGSDLV 182 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks---~~~A~~~-----G~~~~d~t~~~~~Eav~~ADIV 182 (582)
+||+|+|+ |.||..+++.+... .|++++...+.+... .+..... |+.. ..++++++.++|+|
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~-----~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~----~~dl~~~l~~~DvV 76 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALAL-----EGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV----QSSLDAVKDDFDVF 76 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-----TTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE----ESCSTTTTTSCSEE
T ss_pred cEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEecCchhhhhhhHHHHcCCCcCCcee----cCCHHHHhcCCCEE
Confidence 68999999 99999999988754 166665344432211 0111111 2222 34567778899999
Q ss_pred EEeccchhHHHHHHHHHhcCCCCcEEEE-ecCchhhhhhcccccCCCCCcEEEeccCCChhhH--HHHHhhcccccCCCc
Q 007987 183 LLLISDAAQADNYEKIFSCMKPNSILGL-SHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV--RRLYVQGKEINGAGI 259 (582)
Q Consensus 183 ILaVPd~a~~~Vl~eI~~~Lk~GaiL~~-a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~v--R~ly~~G~e~~G~Gv 259 (582)
|-.++|....+++.... +.|.-+++ ..|++....+. .....+.+.+ ...||+.--.. -++.+.--...+.+.
T Consensus 77 IDft~p~~~~~~~~~a~---~~G~~vVigTtG~~~e~~~~-L~~~a~~~~v-v~a~N~siGvn~~~~l~~~aa~~~~~~~ 151 (273)
T 1dih_A 77 IDFTRPEGTLNHLAFCR---QHGKGMVIGTTGFDEAGKQA-IRDAAADIAI-VFAANFSVGVNVMLKLLEKAAKVMGDYT 151 (273)
T ss_dssp EECSCHHHHHHHHHHHH---HTTCEEEECCCCCCHHHHHH-HHHHTTTSCE-EECSCCCHHHHHHHHHHHHHHHHHTTTS
T ss_pred EEcCChHHHHHHHHHHH---hCCCCEEEECCCCCHHHHHH-HHHhcCCCCE-EEEecCcHHHHHHHHHHHHHHHhcCCCC
Confidence 97888776666665433 34554433 55776443221 1112344554 47888655431 111111100111122
Q ss_pred eE-EEeecc----C-CCHHHHHHHHHHHHHhCC
Q 007987 260 NS-SFAVHQ----D-VDGRATNVALGWSVALGS 286 (582)
Q Consensus 260 ~a-liAv~q----d-~tgeale~alala~aiG~ 286 (582)
.. ++-.|+ | ++|.++.+++.++...|.
T Consensus 152 dieiiE~Hh~~K~DaPSGTA~~~ae~i~~~~~~ 184 (273)
T 1dih_A 152 DIEIIEAHHRHKVDAPSGTALAMGEAIAHALDK 184 (273)
T ss_dssp EEEEEEEECTTCCSSSCHHHHHHHHHHHHHTTC
T ss_pred CEEEEEeecCCCCCCCCHHHHHHHHHHHHhhCC
Confidence 22 233333 3 789999999999988875
No 292
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=96.05 E-value=0.0095 Score=61.06 Aligned_cols=76 Identities=16% Similarity=0.104 Sum_probs=59.1
Q ss_pred ccccCCCEEEEEccch-hHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 106 ~~l~gikkIgIIG~Gs-mG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
..++| +++.|||.|. .|..+|+-|... |..|.+..+. ..++.+.+++||+||.
T Consensus 155 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 208 (288)
T 1b0a_A 155 IDTFG-LNAVVIGASNIVGRPMSMELLLA------GCTTTVTHRF-------------------TKNLRHHVENADLLIV 208 (288)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHTT------TCEEEEECSS-------------------CSCHHHHHHHCSEEEE
T ss_pred CCCCC-CEEEEECCChHHHHHHHHHHHHC------CCeEEEEeCC-------------------chhHHHHhccCCEEEE
Confidence 35789 9999999996 599999999988 8888776422 2367788999999999
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+++.... +. ...+|+|++|++++
T Consensus 209 Avg~p~l---I~--~~~vk~GavVIDVg 231 (288)
T 1b0a_A 209 AVGKPGF---IP--GDWIKEGAIVIDVG 231 (288)
T ss_dssp CSCCTTC---BC--TTTSCTTCEEEECC
T ss_pred CCCCcCc---CC--HHHcCCCcEEEEcc
Confidence 9994432 22 23468999998876
No 293
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=96.05 E-value=0.0022 Score=62.69 Aligned_cols=81 Identities=12% Similarity=0.144 Sum_probs=53.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc-cCCeEEEeccchh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLISDAA 190 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~-~ADIVILaVPd~a 190 (582)
++|+|||+|++|.++++.+... . |++++...+.++..... ...|+.+. ...++++.++ +.|+|++++|...
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~----~-g~~iVg~~D~dp~k~g~-~i~gv~V~--~~~dl~ell~~~ID~ViIA~Ps~~ 152 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFG----E-SFELRGFFDVDPEKVGR-PVRGGVIE--HVDLLPQRVPGRIEIALLTVPREA 152 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCC----S-SEEEEEEEESCTTTTTC-EETTEEEE--EGGGHHHHSTTTCCEEEECSCHHH
T ss_pred CEEEEECccHHHHHHHHhHhhc----C-CcEEEEEEeCCHHHHhh-hhcCCeee--cHHhHHHHHHcCCCEEEEeCCchh
Confidence 6899999999999999864322 2 67765555544332211 11344321 1456777776 5899999999998
Q ss_pred HHHHHHHHHh
Q 007987 191 QADNYEKIFS 200 (582)
Q Consensus 191 ~~~Vl~eI~~ 200 (582)
+.++.+.+..
T Consensus 153 ~~ei~~~l~~ 162 (211)
T 2dt5_A 153 AQKAADLLVA 162 (211)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887776643
No 294
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=95.99 E-value=0.0038 Score=62.68 Aligned_cols=73 Identities=15% Similarity=0.173 Sum_probs=50.8
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCc--------eecCCCcCCHHhhhcc
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF--------TEENGTLGDIYETISG 178 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~--------~~~d~t~~~~~Eav~~ 178 (582)
.++| +++.|+|.|.+|.+++..|.+. | +|++.+|+.++..+.+.+.+. .. + +.+..+.+.+
T Consensus 125 ~l~~-k~vlV~GaGgiG~aia~~L~~~------G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~-d--~~~~~~~~~~ 193 (287)
T 1nvt_A 125 RVKD-KNIVIYGAGGAARAVAFELAKD------N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEV-K--FSGLDVDLDG 193 (287)
T ss_dssp CCCS-CEEEEECCSHHHHHHHHHHTSS------S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHE-E--EECTTCCCTT
T ss_pred CcCC-CEEEEECchHHHHHHHHHHHHC------C-CEEEEECCHHHHHHHHHHHhhhcccccceeE-E--EeeHHHhhCC
Confidence 3678 9999999999999999999988 9 988887764443333332211 10 0 1223456678
Q ss_pred CCeEEEeccchh
Q 007987 179 SDLVLLLISDAA 190 (582)
Q Consensus 179 ADIVILaVPd~a 190 (582)
+|+||.++|...
T Consensus 194 ~DilVn~ag~~~ 205 (287)
T 1nvt_A 194 VDIIINATPIGM 205 (287)
T ss_dssp CCEEEECSCTTC
T ss_pred CCEEEECCCCCC
Confidence 899999988654
No 295
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.96 E-value=0.014 Score=60.28 Aligned_cols=76 Identities=16% Similarity=0.179 Sum_probs=59.5
Q ss_pred ccccCCCEEEEEccch-hHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 106 DAFNGINQIGVIGWGS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 106 ~~l~gikkIgIIG~Gs-mG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
..++| +++.|||.|+ +|..+|+-|... |..|.+..+. ..++.+.+++||+||.
T Consensus 161 i~l~g-k~vvVIG~s~iVG~p~A~lL~~~------gAtVtv~hs~-------------------t~~L~~~~~~ADIVI~ 214 (301)
T 1a4i_A 161 VPIAG-RHAVVVGRSKIVGAPMHDLLLWN------NATVTTCHSK-------------------TAHLDEEVNKGDILVV 214 (301)
T ss_dssp CCCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHTTCSEEEE
T ss_pred CCCCC-CEEEEECCCchHHHHHHHHHHhC------CCeEEEEECC-------------------cccHHHHhccCCEEEE
Confidence 35789 9999999996 799999999988 8888776421 2467889999999999
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+++.... +. ...+|+|++|++++
T Consensus 215 Avg~p~~---I~--~~~vk~GavVIDVg 237 (301)
T 1a4i_A 215 ATGQPEM---VK--GEWIKPGAIVIDCG 237 (301)
T ss_dssp CCCCTTC---BC--GGGSCTTCEEEECC
T ss_pred CCCCccc---CC--HHHcCCCcEEEEcc
Confidence 9996432 22 24478999998876
No 296
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=95.93 E-value=0.024 Score=57.98 Aligned_cols=68 Identities=18% Similarity=0.183 Sum_probs=44.3
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCC--ceEEEEecCCcccHHHHHH--cCceec--CCC--cCCHHhhhccCCeE
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEARA--AGFTEE--NGT--LGDIYETISGSDLV 182 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G--~~ViVg~r~~sks~~~A~~--~G~~~~--d~t--~~~~~Eav~~ADIV 182 (582)
+||+|||. |.+|.+++..|... | .++++.+... ....+.+ .+.... ..+ ..+.++++++||+|
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~------~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvV 72 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS------PLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVV 72 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC------TTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEE
Confidence 48999998 99999999999876 6 4666665543 2222222 221100 000 13577889999999
Q ss_pred EEecc
Q 007987 183 LLLIS 187 (582)
Q Consensus 183 ILaVP 187 (582)
|++..
T Consensus 73 vi~ag 77 (314)
T 1mld_A 73 VIPAG 77 (314)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 99874
No 297
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.90 E-value=0.017 Score=59.92 Aligned_cols=71 Identities=23% Similarity=0.236 Sum_probs=44.5
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHH--HcC--ceecCC--CcCCHHhhhccC
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAG--FTEENG--TLGDIYETISGS 179 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~--~~G--~~~~d~--t~~~~~Eav~~A 179 (582)
... +||+|||.|.||.++|..|... |+ ++++.+....+....+. .+. +..... ...+. +.+++|
T Consensus 17 ~~~-~kV~ViGaG~vG~~~a~~l~~~------~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~-~~~~~a 88 (331)
T 4aj2_A 17 VPQ-NKITVVGVGAVGMACAISILMK------DLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDY-SVTANS 88 (331)
T ss_dssp CCS-SEEEEECCSHHHHHHHHHHHHT------TCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSG-GGGTTE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHhC------CCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCH-HHhCCC
Confidence 345 8999999999999999999887 66 66665554322222221 111 110000 02344 468999
Q ss_pred CeEEEec
Q 007987 180 DLVLLLI 186 (582)
Q Consensus 180 DIVILaV 186 (582)
|+||++.
T Consensus 89 DiVvi~a 95 (331)
T 4aj2_A 89 KLVIITA 95 (331)
T ss_dssp EEEEECC
T ss_pred CEEEEcc
Confidence 9999975
No 298
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=95.74 E-value=0.02 Score=51.40 Aligned_cols=109 Identities=18% Similarity=0.099 Sum_probs=73.0
Q ss_pred CEEEEEcc----chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEecc
Q 007987 112 NQIGVIGW----GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~----GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVP 187 (582)
++|+|||. |..|..+.++|++. |++|+-.+.+... -.|... ..++.|+-. -|++++++|
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L~~~------g~~V~pVnP~~~~------i~G~~~----y~sl~dlp~-vDlavi~~p 67 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERLKSH------GHEFIPVGRKKGE------VLGKTI----INERPVIEG-VDTVTLYIN 67 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHHHHH------TCCEEEESSSCSE------ETTEEC----BCSCCCCTT-CCEEEECSC
T ss_pred CEEEEEccCCCCCCHHHHHHHHHHHC------CCeEEEECCCCCc------CCCeec----cCChHHCCC-CCEEEEEeC
Confidence 78999997 56899999999998 8876544433221 146654 456666555 899999999
Q ss_pred chhHHHHHHHHHhcCCCCcEEEEecCchhhhhhcccccCCCCCcEEEeccCCChhhH
Q 007987 188 DAAQADNYEKIFSCMKPNSILGLSHGFLLGHLQSMGLDFPKNIGVIAVCPKGMGPSV 244 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~GaiL~~a~G~~i~~~~~~~i~~p~dv~VI~v~Pngpg~~v 244 (582)
++...++++++... ... .|++..|+.-..+.+ +.-..+++++ ||+.+-..
T Consensus 68 ~~~v~~~v~e~~~~-g~k-~v~~~~G~~~~e~~~--~a~~~Girvv---~nC~gv~l 117 (122)
T 3ff4_A 68 PQNQLSEYNYILSL-KPK-RVIFNPGTENEELEE--ILSENGIEPV---IGCTLVML 117 (122)
T ss_dssp HHHHGGGHHHHHHH-CCS-EEEECTTCCCHHHHH--HHHHTTCEEE---ESCHHHHH
T ss_pred HHHHHHHHHHHHhc-CCC-EEEECCCCChHHHHH--HHHHcCCeEE---CCcCeEEe
Confidence 99999999986543 223 367889984222211 0112467766 37766553
No 299
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.70 E-value=0.0068 Score=61.19 Aligned_cols=98 Identities=18% Similarity=0.173 Sum_probs=63.3
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
.++| +++.|||.|-.+++++..|.+. |. +|.|.+|+.++..+.++..+.....-......+.++++|+||.+
T Consensus 122 ~~~~-~~~lilGaGGaarai~~aL~~~------g~~~i~i~nRt~~ra~~la~~~~~~~~~~~~~~~~~~~~~~dliiNa 194 (269)
T 3tum_A 122 EPAG-KRALVIGCGGVGSAIAYALAEA------GIASITLCDPSTARMGAVCELLGNGFPGLTVSTQFSGLEDFDLVANA 194 (269)
T ss_dssp CCTT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEECSCHHHHHHHHHHHHHHCTTCEEESCCSCSTTCSEEEEC
T ss_pred Cccc-CeEEEEecHHHHHHHHHHHHHh------CCCeEEEeCCCHHHHHHHHHHHhccCCcceehhhhhhhhcccccccC
Confidence 3577 9999999999999999999988 86 77788887655555554432110000012233456789999999
Q ss_pred ccchhHHH----HHHHHHhcCCCCcEEEEe
Q 007987 186 ISDAAQAD----NYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 186 VPd~a~~~----Vl~eI~~~Lk~GaiL~~a 211 (582)
||...... +-......++++.++.+.
T Consensus 195 Tp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~ 224 (269)
T 3tum_A 195 SPVGMGTRAELPLSAALLATLQPDTLVADV 224 (269)
T ss_dssp SSTTCSTTCCCSSCHHHHHTCCTTSEEEEC
T ss_pred CccccCCCCCCCCChHHHhccCCCcEEEEE
Confidence 99654221 112334556777777654
No 300
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=95.62 E-value=0.056 Score=52.41 Aligned_cols=68 Identities=13% Similarity=0.093 Sum_probs=49.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd 188 (582)
++|.|+|.|.+|..++..|.+. |++|++..|+..+ .......++....+...+.+ ++++|+||.+..+
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~d~~--~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQ------GWRIIGTSRNPDQ-MEAIRASGAEPLLWPGEEPS--LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGG------TCEEEEEESCGGG-HHHHHHTTEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred CcEEEECCcHHHHHHHHHHHHC------CCEEEEEEcChhh-hhhHhhCCCeEEEecccccc--cCCCCEEEECCCc
Confidence 7999999999999999999998 9998777775433 34444456543222233433 7889999998854
No 301
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.60 E-value=0.027 Score=58.54 Aligned_cols=93 Identities=15% Similarity=0.138 Sum_probs=58.2
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecC---CcccHHHHHHcCcee--------cCCCc--CCHHhhhc
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK---GSRSFAEARAAGFTE--------ENGTL--GDIYETIS 177 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~---~sks~~~A~~~G~~~--------~d~t~--~~~~Eav~ 177 (582)
+||+||| .|.+|..+++.|.+. .+++++...++ ..+..+ ...++.. .+-.+ .+.++..+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~-----p~~ev~~i~~s~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADH-----PMFELTALAASERSAGKKYK--DACYWFQDRDIPENIKDMVVIPTDPKHEEF 81 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-----SSEEEEEEEECTTTTTSBHH--HHSCCCCSSCCCHHHHTCBCEESCTTSGGG
T ss_pred ceEEEECcCCHHHHHHHHHHhcC-----CCCEEEEEEcccccccccHH--HhcccccccccccCceeeEEEeCCHHHHhc
Confidence 6899999 899999999988765 13565444332 122222 2222110 00001 14455556
Q ss_pred -cCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 178 -GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 178 -~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
++|+||+|+|.....++.+.+. +.|..|++.+|.
T Consensus 82 ~~~DvV~~atp~~~~~~~a~~~~---~aG~~VId~s~~ 116 (354)
T 1ys4_A 82 EDVDIVFSALPSDLAKKFEPEFA---KEGKLIFSNASA 116 (354)
T ss_dssp TTCCEEEECCCHHHHHHHHHHHH---HTTCEEEECCST
T ss_pred CCCCEEEECCCchHHHHHHHHHH---HCCCEEEECCch
Confidence 8999999999988877776554 467778877764
No 302
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.54 E-value=0.019 Score=61.94 Aligned_cols=74 Identities=16% Similarity=0.237 Sum_probs=51.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHH-HHHcCceecCCCcCC---HHhh-hccCCeEEEec
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE-ARAAGFTEENGTLGD---IYET-ISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~-A~~~G~~~~d~t~~~---~~Ea-v~~ADIVILaV 186 (582)
|+|.|+|+|.+|..+|+.|... |++|++-+.+ +...+. ....++..-.|...+ ++++ +++||+++.+|
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~------~~~v~vId~d-~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE------NNDITIVDKD-GDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST------TEEEEEEESC-HHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHC------CCCEEEEECC-HHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence 8899999999999999999888 9988776554 344444 445565322222333 3333 68899999989
Q ss_pred cchhHH
Q 007987 187 SDAAQA 192 (582)
Q Consensus 187 Pd~a~~ 192 (582)
+++..-
T Consensus 77 ~~De~N 82 (461)
T 4g65_A 77 NTDETN 82 (461)
T ss_dssp SCHHHH
T ss_pred CChHHH
Confidence 887553
No 303
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.53 E-value=0.035 Score=59.03 Aligned_cols=89 Identities=18% Similarity=0.178 Sum_probs=63.4
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecC----Cccc--------HHHHHHcCceecCCCcCCHH
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRK----GSRS--------FAEARAAGFTEENGTLGDIY 173 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~----~sks--------~~~A~~~G~~~~d~t~~~~~ 173 (582)
.++. .||.|+|.|.+|.++|+.|... |. +|++.+++ ..+. ...|.+... .....+++
T Consensus 189 ~l~~-~kVVv~GAGaAG~~iAkll~~~------G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~---~~~~~~L~ 258 (388)
T 1vl6_A 189 KIEE-VKVVVNGIGAAGYNIVKFLLDL------GVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP---ERLSGDLE 258 (388)
T ss_dssp CTTT-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT---TCCCSCHH
T ss_pred CCCC-cEEEEECCCHHHHHHHHHHHhC------CCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc---cCchhhHH
Confidence 4666 8999999999999999999988 88 78888876 3332 344443221 11246799
Q ss_pred hhhccCCeEEEeccchhHHHHH-HHHHhcCCCCcEEE
Q 007987 174 ETISGSDLVLLLISDAAQADNY-EKIFSCMKPNSILG 209 (582)
Q Consensus 174 Eav~~ADIVILaVPd~a~~~Vl-~eI~~~Lk~GaiL~ 209 (582)
|+++++|++|=++.|. ++ +++...|+++.+|.
T Consensus 259 eav~~ADVlIG~Sap~----l~t~emVk~Ma~~pIIf 291 (388)
T 1vl6_A 259 TALEGADFFIGVSRGN----ILKPEWIKKMSRKPVIF 291 (388)
T ss_dssp HHHTTCSEEEECSCSS----CSCHHHHTTSCSSCEEE
T ss_pred HHHccCCEEEEeCCCC----ccCHHHHHhcCCCCEEE
Confidence 9999999999887643 33 35555577887664
No 304
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=95.49 E-value=0.032 Score=56.66 Aligned_cols=91 Identities=11% Similarity=0.188 Sum_probs=59.7
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCH---Hhh-hccCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI---YET-ISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~---~Ea-v~~ADIVILaVP 187 (582)
++|.|+|+|..|..+++.|.+. |+ +++. +.+++..+ +.+.|+..-.+...+. .++ +++||.|+++++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~------g~-v~vi-d~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS------EV-FVLA-EDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS------CE-EEEE-SCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred CCEEEECCcHHHHHHHHHHHhC------Cc-EEEE-eCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 6899999999999999999888 87 6554 44444455 6666764322333333 234 778999999999
Q ss_pred chhHHHHHHHHHhcCCCC-cEEEEe
Q 007987 188 DAAQADNYEKIFSCMKPN-SILGLS 211 (582)
Q Consensus 188 d~a~~~Vl~eI~~~Lk~G-aiL~~a 211 (582)
++...-..-..+..+.+. .++.-+
T Consensus 187 ~d~~n~~~~~~ar~~~~~~~iiar~ 211 (336)
T 1lnq_A 187 SDSETIHCILGIRKIDESVRIIAEA 211 (336)
T ss_dssp SHHHHHHHHHHHHTTCTTSEEEEEC
T ss_pred ccHHHHHHHHHHHHHCCCCeEEEEE
Confidence 875433333444445555 444444
No 305
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=95.45 E-value=0.038 Score=60.26 Aligned_cols=73 Identities=18% Similarity=0.149 Sum_probs=43.3
Q ss_pred CEEEEEccchhH--HHHHHHHHHhhhhhcC-CceEEEEecCCcccHHHH----H----HcCceecCCCcCCHHhhhccCC
Q 007987 112 NQIGVIGWGSQG--PAQAQNLRDSLAEAKS-DIVVKVGLRKGSRSFAEA----R----AAGFTEENGTLGDIYETISGSD 180 (582)
Q Consensus 112 kkIgIIG~GsmG--~AiA~nLrds~~~~g~-G~~ViVg~r~~sks~~~A----~----~~G~~~~d~t~~~~~Eav~~AD 180 (582)
+||+|||.|+|| .+++..|... .+. |.+|++.++...+ .+.+ . ..+....=....+..+++++||
T Consensus 4 ~KIaVIGAGsVg~g~ala~~La~~---~~l~~~eV~L~Di~~e~-l~~~~~~~~~~l~~~~~~~~I~~ttD~~eal~dAD 79 (480)
T 1obb_A 4 VKIGIIGAGSAVFSLRLVSDLCKT---PGLSGSTVTLMDIDEER-LDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDAD 79 (480)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTC---GGGTTCEEEEECSCHHH-HHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCS
T ss_pred CEEEEECCCchHHHHHHHHHHHhc---CcCCCCEEEEEeCCHHH-HHHHHHHHHHHhccCCCCcEEEEECCHHHHhCCCC
Confidence 699999999985 5556677532 122 5577766654322 1111 1 1111100001346778999999
Q ss_pred eEEEeccc
Q 007987 181 LVLLLISD 188 (582)
Q Consensus 181 IVILaVPd 188 (582)
+||+++|.
T Consensus 80 ~VIiaagv 87 (480)
T 1obb_A 80 FVINTAMV 87 (480)
T ss_dssp EEEECCCT
T ss_pred EEEECCCc
Confidence 99999974
No 306
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.45 E-value=0.051 Score=51.54 Aligned_cols=75 Identities=19% Similarity=0.166 Sum_probs=51.7
Q ss_pred cccccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCc-eec--CCCcCCHHhhhccCC
Q 007987 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGF-TEE--NGTLGDIYETISGSD 180 (582)
Q Consensus 105 ~~~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~-~~~--d~t~~~~~Eav~~AD 180 (582)
...|+| |+|.|.|. |.+|.++++.|.+. |++|++..|+.++ .+.....++ ... |-+ .++.+++.+.|
T Consensus 16 ~~~l~~-~~ilVtGatG~iG~~l~~~L~~~------G~~V~~~~R~~~~-~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~D 86 (236)
T 3e8x_A 16 NLYFQG-MRVLVVGANGKVARYLLSELKNK------GHEPVAMVRNEEQ-GPELRERGASDIVVANLE-EDFSHAFASID 86 (236)
T ss_dssp -----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSGGG-HHHHHHTTCSEEEECCTT-SCCGGGGTTCS
T ss_pred ccCcCC-CeEEEECCCChHHHHHHHHHHhC------CCeEEEEECChHH-HHHHHhCCCceEEEcccH-HHHHHHHcCCC
Confidence 466889 99999997 99999999999998 9998887776544 333344455 321 211 45567888999
Q ss_pred eEEEeccc
Q 007987 181 LVLLLISD 188 (582)
Q Consensus 181 IVILaVPd 188 (582)
+||.+...
T Consensus 87 ~vi~~ag~ 94 (236)
T 3e8x_A 87 AVVFAAGS 94 (236)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99998764
No 307
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.35 E-value=0.053 Score=53.43 Aligned_cols=89 Identities=10% Similarity=0.110 Sum_probs=59.8
Q ss_pred ccccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccH-HHHHHcCceecCCCcCCHHhhhcc
Q 007987 100 LFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARAAGFTEENGTLGDIYETISG 178 (582)
Q Consensus 100 ~f~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~-~~A~~~G~~~~d~t~~~~~Eav~~ 178 (582)
-|| ..-.++| ++|.|||.|.+|..-++.|.+. |.+|+|......+.. +.+.+.++....+. .. .+-+.+
T Consensus 22 ~~P-ifl~L~g-k~VLVVGgG~va~~ka~~Ll~~------GA~VtVvap~~~~~l~~l~~~~~i~~i~~~-~~-~~dL~~ 91 (223)
T 3dfz_A 22 MYT-VMLDLKG-RSVLVVGGGTIATRRIKGFLQE------GAAITVVAPTVSAEINEWEAKGQLRVKRKK-VG-EEDLLN 91 (223)
T ss_dssp CCE-EEECCTT-CCEEEECCSHHHHHHHHHHGGG------CCCEEEECSSCCHHHHHHHHTTSCEEECSC-CC-GGGSSS
T ss_pred ccc-cEEEcCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEECCCCCHHHHHHHHcCCcEEEECC-CC-HhHhCC
Confidence 366 3356899 9999999999999999999998 888877665433323 33333334321111 12 244678
Q ss_pred CCeEEEeccchhHHHHHHHH
Q 007987 179 SDLVLLLISDAAQADNYEKI 198 (582)
Q Consensus 179 ADIVILaVPd~a~~~Vl~eI 198 (582)
+|+||.+|.+...-..+.+.
T Consensus 92 adLVIaAT~d~~~N~~I~~~ 111 (223)
T 3dfz_A 92 VFFIVVATNDQAVNKFVKQH 111 (223)
T ss_dssp CSEEEECCCCTHHHHHHHHH
T ss_pred CCEEEECCCCHHHHHHHHHH
Confidence 99999999887665544443
No 308
>3ing_A Homoserine dehydrogenase; NP_394635.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: NDP; 1.95A {Thermoplasma acidophilum}
Probab=95.27 E-value=0.039 Score=57.10 Aligned_cols=98 Identities=14% Similarity=0.086 Sum_probs=56.5
Q ss_pred CEEEEEccchhHHHHHHHHHHhh-hhhcCCceEEEEecCCcc---------cH-HHHHHcCceecCCCcCCHHhhhc--c
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSL-AEAKSDIVVKVGLRKGSR---------SF-AEARAAGFTEENGTLGDIYETIS--G 178 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~-~~~g~G~~ViVg~r~~sk---------s~-~~A~~~G~~~~d~t~~~~~Eav~--~ 178 (582)
.+|+|||+|.+|..+++.|.+.- ...|.+++++...+.+.. .+ +.+.+.|... +-.. +..+.+. +
T Consensus 5 irVgIiG~G~VG~~~~~~L~~~~~~~~g~~l~lvaVad~~~~~~~~~idl~~~~~~~~~~g~~~-~~~~-d~~e~l~~~~ 82 (325)
T 3ing_A 5 IRIILMGTGNVGLNVLRIIDASNRRRSAFSIKVVGVSDSRSYASGRNLDISSIISNKEKTGRIS-DRAF-SGPEDLMGEA 82 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHC--CEEEEEEEECSSBEEECSSCCHHHHHHHHHHHSCSC-SSBC-CSGGGGTTSC
T ss_pred EEEEEEcCcHHHHHHHHHHHhchhhccCCCEEEEEEEecChhhcccccCHHHHHHHhhhcCCCC-cccC-CHHHHhcCCC
Confidence 47999999999999999998630 112224554332222211 11 2233445221 1012 5566664 5
Q ss_pred CCeEEEeccchhH-HHHHHHHHhcCCCCcEEEEe
Q 007987 179 SDLVLLLISDAAQ-ADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 179 ADIVILaVPd~a~-~~Vl~eI~~~Lk~GaiL~~a 211 (582)
.|+|+.++|+..+ ...++-+...|+.|+-|+.+
T Consensus 83 iDvVVe~T~~~~~~~pa~~~~~~aL~aGkhVVta 116 (325)
T 3ing_A 83 ADLLVDCTPASRDGVREYSLYRMAFESGMNVVTA 116 (325)
T ss_dssp CSEEEECCCCCSSSHHHHHHHHHHHHTTCEEEEC
T ss_pred CCEEEECCCCccccchHHHHHHHHHHCCCeEEEc
Confidence 8999999998755 33344455667778866654
No 309
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=95.26 E-value=0.029 Score=57.32 Aligned_cols=77 Identities=17% Similarity=0.193 Sum_probs=56.4
Q ss_pred cccCCCEEEEEccchh-HHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 107 AFNGINQIGVIGWGSQ-GPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 107 ~l~gikkIgIIG~Gsm-G~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
.++| +++.|||.|.+ |..+|+.|... |.|..|.+..+. ..++.+.+++||+||.+
T Consensus 155 ~l~g-k~vvVvG~s~iVG~p~A~lL~~~----g~~atVtv~h~~-------------------t~~L~~~~~~ADIVI~A 210 (281)
T 2c2x_A 155 SIAG-AHVVVIGRGVTVGRPLGLLLTRR----SENATVTLCHTG-------------------TRDLPALTRQADIVVAA 210 (281)
T ss_dssp CCTT-CEEEEECCCTTTHHHHHHHHTST----TTCCEEEEECTT-------------------CSCHHHHHTTCSEEEEC
T ss_pred CCCC-CEEEEECCCcHHHHHHHHHHhcC----CCCCEEEEEECc-------------------hhHHHHHHhhCCEEEEC
Confidence 5889 99999999976 99999998764 113467665432 23678889999999999
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
++-... +. ...+|+|++|++++
T Consensus 211 vg~p~~---I~--~~~vk~GavVIDVg 232 (281)
T 2c2x_A 211 VGVAHL---LT--ADMVRPGAAVIDVG 232 (281)
T ss_dssp SCCTTC---BC--GGGSCTTCEEEECC
T ss_pred CCCCcc---cC--HHHcCCCcEEEEcc
Confidence 984432 22 24468999888775
No 310
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=95.24 E-value=0.042 Score=57.32 Aligned_cols=74 Identities=15% Similarity=0.079 Sum_probs=46.1
Q ss_pred ccccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHH--HcC-ceecC-CCcCCHHhhhcc
Q 007987 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEAR--AAG-FTEEN-GTLGDIYETISG 178 (582)
Q Consensus 106 ~~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~--~~G-~~~~d-~t~~~~~Eav~~ 178 (582)
+.+.+ +||+|||. |.+|.++|..+... |+ ++++.+....+....+. ..+ +.... ....+..+++++
T Consensus 4 ~~~~~-~KV~ViGaaG~VG~~~a~~l~~~------g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~d 76 (343)
T 3fi9_A 4 SYLTE-EKLTIVGAAGMIGSNMAQTAAMM------RLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTD 76 (343)
T ss_dssp CCSCS-SEEEEETTTSHHHHHHHHHHHHT------TCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTT
T ss_pred cccCC-CEEEEECCCChHHHHHHHHHHhc------CCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCC
Confidence 34556 89999997 99999999988877 64 66555443222121111 111 11000 002467788999
Q ss_pred CCeEEEec
Q 007987 179 SDLVLLLI 186 (582)
Q Consensus 179 ADIVILaV 186 (582)
||+||++.
T Consensus 77 ADvVvita 84 (343)
T 3fi9_A 77 AKYIVSSG 84 (343)
T ss_dssp EEEEEECC
T ss_pred CCEEEEcc
Confidence 99999985
No 311
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=95.15 E-value=0.038 Score=57.41 Aligned_cols=93 Identities=11% Similarity=0.054 Sum_probs=56.3
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCcee--cCCCcCCHHhhhccCCeEEEeccc
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE--ENGTLGDIYETISGSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~--~d~t~~~~~Eav~~ADIVILaVPd 188 (582)
+||+||| .|.+|..+.+.|.+. ..++++...+..+...+.....+... .+-.+.+.++ +.++|+||+|+|.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~-~~~vDvV~~a~g~ 78 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSH-----PYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEK-LEPADILVLALPH 78 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC-----TTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGG-CCCCSEEEECCCT
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-----CCcEEEEEECchhhCchhHHhCchhcCcccccccchhH-hcCCCEEEEcCCc
Confidence 6899999 699999999998865 13465444443221111111111100 0111233334 4789999999999
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 189 AAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
....++.+.. ++.|..|++.++
T Consensus 79 ~~s~~~a~~~---~~aG~~VId~Sa 100 (345)
T 2ozp_A 79 GVFAREFDRY---SALAPVLVDLSA 100 (345)
T ss_dssp THHHHTHHHH---HTTCSEEEECSS
T ss_pred HHHHHHHHHH---HHCCCEEEEcCc
Confidence 8877766654 356777777766
No 312
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=95.14 E-value=0.024 Score=57.11 Aligned_cols=80 Identities=15% Similarity=0.017 Sum_probs=53.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccchhH
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISDAAQ 191 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd~a~ 191 (582)
++|++||+|+||..+++. + +++++..+. .+.. +.|+.. +.|+++++.++|+|+-+.++++.
T Consensus 13 ~rV~i~G~GaIG~~v~~~-~--------~leLv~v~~--~k~g----elgv~a----~~d~d~lla~pD~VVe~A~~~av 73 (253)
T 1j5p_A 13 MTVLIIGMGNIGKKLVEL-G--------NFEKIYAYD--RISK----DIPGVV----RLDEFQVPSDVSTVVECASPEAV 73 (253)
T ss_dssp CEEEEECCSHHHHHHHHH-S--------CCSEEEEEC--SSCC----CCSSSE----ECSSCCCCTTCCEEEECSCHHHH
T ss_pred ceEEEECcCHHHHHHHhc-C--------CcEEEEEEe--cccc----ccCcee----eCCHHHHhhCCCEEEECCCHHHH
Confidence 899999999999999887 2 454433233 2211 125543 56788888899999999987755
Q ss_pred HHHHHHHHhcCCCCcEEE-EecC
Q 007987 192 ADNYEKIFSCMKPNSILG-LSHG 213 (582)
Q Consensus 192 ~~Vl~eI~~~Lk~GaiL~-~a~G 213 (582)
.+. +.+.|+.|.-|+ .+-|
T Consensus 74 ~e~---~~~iL~aG~dvv~~S~g 93 (253)
T 1j5p_A 74 KEY---SLQILKNPVNYIIISTS 93 (253)
T ss_dssp HHH---HHHHTTSSSEEEECCGG
T ss_pred HHH---HHHHHHCCCCEEEcChh
Confidence 443 445577887554 4444
No 313
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=95.14 E-value=0.042 Score=59.32 Aligned_cols=93 Identities=13% Similarity=0.152 Sum_probs=63.7
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc---eEEEEe----cC----Cccc---HH-----HHHHcCceecC
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGL----RK----GSRS---FA-----EARAAGFTEEN 166 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~---~ViVg~----r~----~sks---~~-----~A~~~G~~~~d 166 (582)
..+++ ++|.|+|.|..|.+++..|.+. |. +|++.+ |+ .... .. .+...+..
T Consensus 182 ~~l~~-~rvlvlGAGgAg~aia~~L~~~------G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~a~~~~~~--- 251 (439)
T 2dvm_A 182 KKISE-ITLALFGAGAAGFATLRILTEA------GVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWLLKKTNGE--- 251 (439)
T ss_dssp CCTTT-CCEEEECCSHHHHHHHHHHHHT------TCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHHHTTSCTT---
T ss_pred CCccC-CEEEEECccHHHHHHHHHHHHc------CCCcCeEEEEEccCCCcCccccccchhHHHHHHHHHhhccccc---
Confidence 34678 8999999999999999999998 87 688888 65 2211 10 01111110
Q ss_pred CCcCCHHhhhccCCeEEEeccc--hhHHHHHHHHHhcCCCCcEEEEe
Q 007987 167 GTLGDIYETISGSDLVLLLISD--AAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 167 ~t~~~~~Eav~~ADIVILaVPd--~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
....++.++++++|+||-++|. ....+ +....|+++.+|.+.
T Consensus 252 ~~~~~L~e~l~~aDVlInaT~~~~G~~~~---e~v~~m~~~~iVfDL 295 (439)
T 2dvm_A 252 NIEGGPQEALKDADVLISFTRPGPGVIKP---QWIEKMNEDAIVFPL 295 (439)
T ss_dssp CCCSSHHHHHTTCSEEEECSCCCSSSSCH---HHHTTSCTTCEEEEC
T ss_pred cccccHHHHhccCCEEEEcCCCccCCCCh---HHHHhcCCCCEEEEC
Confidence 0134678999999999999997 55432 334567778887766
No 314
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.07 E-value=0.041 Score=57.52 Aligned_cols=92 Identities=11% Similarity=0.039 Sum_probs=57.1
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCcee----cCCCcCCHHhhhccCCeEEEec
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE----ENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~----~d~t~~~~~Eav~~ADIVILaV 186 (582)
.||+|+| .|.+|..+.+.|.+. ..++++...+..+...+.....+... .+-.+.+ ++..+++|+||+|+
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~-~~~~~~vDvVf~at 90 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANH-----PHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK-DADFSTVDAVFCCL 90 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTC-----SSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG-GCCGGGCSEEEECC
T ss_pred cEEEEECcCCHHHHHHHHHHHcC-----CCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc-hhHhcCCCEEEEcC
Confidence 6899999 899999999999876 13465544443222122222222110 0001222 44556899999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 187 SDAAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
|.....+.... + +.|..|++.++
T Consensus 91 p~~~s~~~a~~---~-~aG~~VId~sa 113 (359)
T 1xyg_A 91 PHGTTQEIIKE---L-PTALKIVDLSA 113 (359)
T ss_dssp CTTTHHHHHHT---S-CTTCEEEECSS
T ss_pred CchhHHHHHHH---H-hCCCEEEECCc
Confidence 98887655543 3 67888887776
No 315
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=94.84 E-value=0.045 Score=58.95 Aligned_cols=91 Identities=19% Similarity=0.220 Sum_probs=66.3
Q ss_pred ccCCCEEEEEccc----hhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 007987 108 FNGINQIGVIGWG----SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 108 l~gikkIgIIG~G----smG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
|+- ++|+|||.+ +.|..+.++|++. | +..| +...+.... -.|... +.++.|+-...|+++
T Consensus 6 ~~p-~siAVvGas~~~~~~g~~v~~~l~~~----g-~~~v-~pVnP~~~~-----i~G~~~----y~sl~~lp~~~Dlav 69 (457)
T 2csu_A 6 FNP-KGIAVIGASNDPKKLGYEVFKNLKEY----K-KGKV-YPVNIKEEE-----VQGVKA----YKSVKDIPDEIDLAI 69 (457)
T ss_dssp TSC-SEEEEETCCSCTTSHHHHHHHHHTTC----C-SSEE-EEECSSCSE-----ETTEEC----BSSTTSCSSCCSEEE
T ss_pred cCC-CeEEEECcCCCCCchHHHHHHHHHHc----C-CCEE-EEECCCCCe-----ECCEec----cCCHHHcCCCCCEEE
Confidence 344 899999998 7899999999876 2 2344 444432221 147764 567888877899999
Q ss_pred EeccchhHHHHHHHHHhcCCCCcEEEEecCch
Q 007987 184 LLISDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (582)
Q Consensus 184 LaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~ 215 (582)
+++|+....+++++.... ....+|+++.||.
T Consensus 70 i~vp~~~~~~~v~e~~~~-Gi~~vv~~s~G~~ 100 (457)
T 2csu_A 70 IVVPKRFVKDTLIQCGEK-GVKGVVIITAGFG 100 (457)
T ss_dssp ECSCHHHHHHHHHHHHHH-TCCEEEECCCSST
T ss_pred EecCHHHHHHHHHHHHHc-CCCEEEEecCCCC
Confidence 999999999999986543 2345778898984
No 316
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=94.82 E-value=0.069 Score=55.58 Aligned_cols=93 Identities=15% Similarity=0.202 Sum_probs=57.6
Q ss_pred CCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCC-----cccHHHHH--HcCceecCCCcC---CHHhhhccC
Q 007987 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-----SRSFAEAR--AAGFTEENGTLG---DIYETISGS 179 (582)
Q Consensus 111 ikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~-----sks~~~A~--~~G~~~~d~t~~---~~~Eav~~A 179 (582)
|+||+||| .|.+|..+.+.|.+. .++++.....+. .+.....- -.|.. +-.+. +.++.++++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-----p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~--~~~v~~~~~~~~~~~~~ 76 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-----PHMNITALTVSAQSNDAGKLISDLHPQLKGIV--ELPLQPMSDISEFSPGV 76 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-----TTEEEEEEEEETTCTTTTSBHHHHCGGGTTTC--CCBEEEESSGGGTCTTC
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-----CCCcEEEEEecCchhhcCCchHHhCccccCcc--ceeEeccCCHHHHhcCC
Confidence 57899999 599999999988874 145554333222 12222110 01211 00112 344444899
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
|+||+|+|.....+..+++. +.|..|++.++
T Consensus 77 Dvvf~a~p~~~s~~~~~~~~---~~g~~vIDlSa 107 (337)
T 3dr3_A 77 DVVFLATAHEVSHDLAPQFL---EAGCVVFDLSG 107 (337)
T ss_dssp SEEEECSCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CEEEECCChHHHHHHHHHHH---HCCCEEEEcCC
Confidence 99999999988777777653 46887877665
No 317
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.73 E-value=0.083 Score=53.90 Aligned_cols=70 Identities=17% Similarity=0.077 Sum_probs=50.0
Q ss_pred CCEEEEEccchhHHH-HHHHHHHhhhhhcCCceEEEEecCCc-ccHHHHHHcCceecCCCcCCHHhhh-ccCCeEEEe--
Q 007987 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETI-SGSDLVLLL-- 185 (582)
Q Consensus 111 ikkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~ViVg~r~~s-ks~~~A~~~G~~~~d~t~~~~~Eav-~~ADIVILa-- 185 (582)
+|+|.|||.|-+|.+ +|+.|++. |++|.+.+.... ...+..++.|+....+ .+.+++. .++|+||+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~------G~~V~~~D~~~~~~~~~~L~~~gi~v~~g--~~~~~l~~~~~d~vV~Spg 75 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA------GFEVSGCDAKMYPPMSTQLEALGIDVYEG--FDAAQLDEFKADVYVIGNV 75 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT------TCEEEEEESSCCTTHHHHHHHTTCEEEES--CCGGGGGSCCCSEEEECTT
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC------CCEEEEEcCCCCcHHHHHHHhCCCEEECC--CCHHHcCCCCCCEEEECCC
Confidence 489999999999996 99999999 999988776542 3345556678864211 2344444 479999984
Q ss_pred ccc
Q 007987 186 ISD 188 (582)
Q Consensus 186 VPd 188 (582)
+|+
T Consensus 76 i~~ 78 (326)
T 3eag_A 76 AKR 78 (326)
T ss_dssp CCT
T ss_pred cCC
Confidence 554
No 318
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=94.72 E-value=0.11 Score=56.05 Aligned_cols=92 Identities=17% Similarity=0.259 Sum_probs=55.8
Q ss_pred CEEEEEccchhHHHHHHHHHHh---hh-hhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEe
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDS---LA-EAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLL 185 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds---~~-~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILa 185 (582)
.+|||||+|.+|..++..|.+. +. ..|.+++++...+.+....+ ....+... ..+.++++. +.|+|+.+
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~~-~~~~~~~~----~~d~~ell~d~diDvVve~ 85 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKAE-ALAGGLPL----TTNPFDVVDDPEIDIVVEL 85 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHHH-HHHTTCCE----ESCTHHHHTCTTCCEEEEC
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHhh-hhcccCcc----cCCHHHHhcCCCCCEEEEc
Confidence 4799999999999999888642 11 12346665433333222111 11123332 467888886 57999999
Q ss_pred ccc-hhHHHHHHHHHhcCCCCcEEEEe
Q 007987 186 ISD-AAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 186 VPd-~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+|+ ..+.++..+ .|+.|+-|+..
T Consensus 86 tp~~~~h~~~~~~---AL~aGKhVvte 109 (444)
T 3mtj_A 86 IGGLEPARELVMQ---AIANGKHVVTA 109 (444)
T ss_dssp CCSSTTHHHHHHH---HHHTTCEEEEC
T ss_pred CCCchHHHHHHHH---HHHcCCEEEEC
Confidence 996 666665543 44567765543
No 319
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=94.57 E-value=0.078 Score=52.42 Aligned_cols=87 Identities=15% Similarity=0.218 Sum_probs=54.5
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCC-------------------cccHHHHHHc----
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSFAEARAA---- 160 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~-------------------sks~~~A~~~---- 160 (582)
.+.|++ ++|.|||+|.+|..++.+|..+ |+ ++.+.++.. .+....++..
T Consensus 23 q~~l~~-~~VlvvG~GglG~~va~~La~~------Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n 95 (251)
T 1zud_1 23 QQKLLD-SQVLIIGLGGLGTPAALYLAGA------GVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN 95 (251)
T ss_dssp HHHHHT-CEEEEECCSTTHHHHHHHHHHT------TCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred HHHHhc-CcEEEEccCHHHHHHHHHHHHc------CCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC
Confidence 467888 9999999999999999999998 77 555553321 1211111111
Q ss_pred -Cceec--CCCcC--CHHhhhccCCeEEEeccchhHHHHHHHH
Q 007987 161 -GFTEE--NGTLG--DIYETISGSDLVLLLISDAAQADNYEKI 198 (582)
Q Consensus 161 -G~~~~--d~t~~--~~~Eav~~ADIVILaVPd~a~~~Vl~eI 198 (582)
++.+. +..+. +..+.++++|+||.++........+.+.
T Consensus 96 p~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~ 138 (251)
T 1zud_1 96 PDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAA 138 (251)
T ss_dssp TTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHH
T ss_pred CCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHH
Confidence 22110 11111 2446778899999999876655566554
No 320
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=94.46 E-value=0.12 Score=48.49 Aligned_cols=72 Identities=15% Similarity=0.213 Sum_probs=47.3
Q ss_pred CEEEEEc-cchhHHHHHHHHH-HhhhhhcCCceEEEEecCCc-ccHHHH-HHcCceecCCCcCC---HHhhhccCCeEEE
Q 007987 112 NQIGVIG-WGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGS-RSFAEA-RAAGFTEENGTLGD---IYETISGSDLVLL 184 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLr-ds~~~~g~G~~ViVg~r~~s-ks~~~A-~~~G~~~~d~t~~~---~~Eav~~ADIVIL 184 (582)
|+|.|+| .|.+|.++++.|. +. |++|++..|+.. +..+.+ ...++......+.+ +.+++++.|+||.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYT------DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHC------CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcC------CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 6699999 5999999999999 77 999887777543 222221 11222211111333 4467889999999
Q ss_pred eccch
Q 007987 185 LISDA 189 (582)
Q Consensus 185 aVPd~ 189 (582)
+....
T Consensus 80 ~ag~~ 84 (221)
T 3r6d_A 80 GAMES 84 (221)
T ss_dssp SCCCC
T ss_pred cCCCC
Confidence 88753
No 321
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.46 E-value=0.12 Score=47.64 Aligned_cols=69 Identities=16% Similarity=0.207 Sum_probs=46.2
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCH-HhhhccCCeEEEeccc
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~-~Eav~~ADIVILaVPd 188 (582)
|||.|+| .|.+|.++++.|.+. |++|++..|+.++..... .++......+.+. .+++.+.|+||.+...
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 71 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR------GHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVVDAYGI 71 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEEECCCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhC------CCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEEECCcC
Confidence 5799999 599999999999998 999887777644322111 3443211111111 1678899999998754
No 322
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=94.43 E-value=0.072 Score=55.32 Aligned_cols=91 Identities=11% Similarity=0.111 Sum_probs=55.0
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEec-C--CcccHHHHHHcCce--------ecCCCcC--CHHhhhc
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLR-K--GSRSFAEARAAGFT--------EENGTLG--DIYETIS 177 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r-~--~sks~~~A~~~G~~--------~~d~t~~--~~~Eav~ 177 (582)
.||+||| .|.+|..+.+.|.+. ..++++...+ . ..+.. ....++. ..+-.+. +.++ +.
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~-----p~~elvai~~s~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~ 76 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKH-----PYLELVKVSASPSKIGKKY--KDAVKWIEQGDIPEEVQDLPIVSTNYED-HK 76 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTC-----SSEEEEEEECCGGGTTSBH--HHHCCCCSSSSCCHHHHTCBEECSSGGG-GT
T ss_pred cEEEEECcCCHHHHHHHHHHHhC-----CCcEEEEEecChhhcCCCH--HHhcCcccccccccCCceeEEeeCCHHH-hc
Confidence 6899999 899999999988764 1346544431 1 11222 2222211 0000011 3333 47
Q ss_pred cCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 178 ~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
++|+||+|+|.....++..... +.|..|++.++
T Consensus 77 ~vDvVf~atp~~~s~~~a~~~~---~aG~~VId~s~ 109 (350)
T 2ep5_A 77 DVDVVLSALPNELAESIELELV---KNGKIVVSNAS 109 (350)
T ss_dssp TCSEEEECCCHHHHHHHHHHHH---HTTCEEEECSS
T ss_pred CCCEEEECCChHHHHHHHHHHH---HCCCEEEECCc
Confidence 8999999999988777766543 45776777665
No 323
>1ebf_A Homoserine dehydrogenase; dinucleotide, NAD, dimer, oxidoreductase; HET: NAD; 2.30A {Saccharomyces cerevisiae} SCOP: c.2.1.3 d.81.1.2 PDB: 1ebu_A* 1tve_A* 1q7g_A*
Probab=94.35 E-value=0.036 Score=57.99 Aligned_cols=22 Identities=32% Similarity=0.364 Sum_probs=20.1
Q ss_pred CEEEEEccchhHHHHHHHHHHh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDS 133 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds 133 (582)
.+|||||+|.||..++..|++.
T Consensus 5 i~vgIiG~G~VG~~~~~~l~~~ 26 (358)
T 1ebf_A 5 VNVAVIGAGVVGSAFLDQLLAM 26 (358)
T ss_dssp EEEEEECCSHHHHHHHHHHHHC
T ss_pred EEEEEEecCHHHHHHHHHHHhc
Confidence 4799999999999999999875
No 324
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=94.35 E-value=0.13 Score=53.45 Aligned_cols=93 Identities=14% Similarity=0.118 Sum_probs=54.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecC--CcccHHHHHHc----C------------ceecCCC-----
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEARAA----G------------FTEENGT----- 168 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~--~sks~~~A~~~----G------------~~~~d~t----- 168 (582)
.||||+|+|.+|+-+++.|.+. .+++++...+. +........++ | +.. ++.
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~-----~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v-~g~~i~v~ 77 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNS-----GKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVI-NGNPITIF 77 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-----CSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEE-TTEEEEEE
T ss_pred eEEEEEccCHHHHHHHHHHHcC-----CCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEE-CCeEEEEE
Confidence 5899999999999999998765 15676544432 22211111111 1 010 000
Q ss_pred -cCCHHhhh---ccCCeEEEeccchhHHHHHHHHHhcCCCCc-EEEEecC
Q 007987 169 -LGDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS-ILGLSHG 213 (582)
Q Consensus 169 -~~~~~Eav---~~ADIVILaVPd~a~~~Vl~eI~~~Lk~Ga-iL~~a~G 213 (582)
..+++++- .++|+||.++|.....+... .+++.|. .|.+++.
T Consensus 78 ~~~d~~~l~~~~~~vDvV~eatg~~~~~e~a~---~~l~aGak~V~iSap 124 (335)
T 1u8f_O 78 QERDPSKIKWGDAGAEYVVESTGVFTTMEKAG---AHLQGGAKRVIISAP 124 (335)
T ss_dssp CCSSGGGCCTTTTTCCEEEECSSSCCSHHHHG---GGGGGTCSEEEESSC
T ss_pred ecCCHHHCccccCCCCEEEECCCchhhHHHHH---HHHhCCCeEEEeccC
Confidence 12444441 47899999999888766554 4567784 4555544
No 325
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=94.30 E-value=0.15 Score=52.35 Aligned_cols=67 Identities=13% Similarity=0.162 Sum_probs=43.6
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCC--ceEEEEecCCcccHHHHH--HcC-c--eecCCC--cCCHHhhhccCCe
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRSFAEAR--AAG-F--TEENGT--LGDIYETISGSDL 181 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G--~~ViVg~r~~sks~~~A~--~~G-~--~~~d~t--~~~~~Eav~~ADI 181 (582)
+||+||| .|.+|.+++..|.+. | .+|++.+.... ...+. ... . .. ... ..+..++++++|+
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~------g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v-~~~~~t~d~~~al~gaDv 79 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMN------PLVSVLHLYDVVNA--PGVTADISHMDTGAVV-RGFLGQQQLEAALTGMDL 79 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHC------TTEEEEEEEESSSH--HHHHHHHHTSCSSCEE-EEEESHHHHHHHHTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEeCCCc--HhHHHHhhcccccceE-EEEeCCCCHHHHcCCCCE
Confidence 7899999 899999999999887 6 46655543332 22221 111 1 11 000 1245788999999
Q ss_pred EEEecc
Q 007987 182 VLLLIS 187 (582)
Q Consensus 182 VILaVP 187 (582)
||++.+
T Consensus 80 Vi~~ag 85 (326)
T 1smk_A 80 IIVPAG 85 (326)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999875
No 326
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=94.27 E-value=0.062 Score=51.23 Aligned_cols=94 Identities=13% Similarity=0.171 Sum_probs=56.4
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCC-ceEEEEecCCcccHHHHHHcCceecCCCcCC---HHhhhccCCeEEEec
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G-~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~---~~Eav~~ADIVILaV 186 (582)
|+|.|.| .|.+|.++++.|.+. | ++|++..|+.++..+ ....++......+.+ +++++++.|+||.+.
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~------G~~~V~~~~R~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a 96 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADK------QTIKQTLFARQPAKIHK-PYPTNSQIIMGDVLNHAALKQAMQGQDIVYANL 96 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC------TTEEEEEEESSGGGSCS-SCCTTEEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhC------CCceEEEEEcChhhhcc-cccCCcEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence 8899999 699999999999988 8 788777775433211 111122211111333 446788999999877
Q ss_pred cchhHHHHHHHHHhcCC---CCcEEEEec
Q 007987 187 SDAAQADNYEKIFSCMK---PNSILGLSH 212 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk---~GaiL~~a~ 212 (582)
.........+.+.+.++ .+.+|.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~iV~iSS 125 (236)
T 3qvo_A 97 TGEDLDIQANSVIAAMKACDVKRLIFVLS 125 (236)
T ss_dssp CSTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCchhHHHHHHHHHHHHcCCCEEEEEec
Confidence 75443333334444432 234554443
No 327
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=94.27 E-value=0.044 Score=56.07 Aligned_cols=69 Identities=16% Similarity=0.147 Sum_probs=41.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHHc----CceecCC--CcCCHHhhhccCCeEE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAA----GFTEENG--TLGDIYETISGSDLVL 183 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~~----G~~~~d~--t~~~~~Eav~~ADIVI 183 (582)
+||+|||.|.+|.++|..|..+ ++ ++++.+....+..-.|.+. -+...+. ...+..+++++||+||
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~------~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVv 74 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN------LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIV 74 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH------SCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEE
Confidence 6899999999999999999887 65 5655554432222222211 1110000 0122235789999999
Q ss_pred Eec
Q 007987 184 LLI 186 (582)
Q Consensus 184 LaV 186 (582)
++.
T Consensus 75 itA 77 (294)
T 2x0j_A 75 VTA 77 (294)
T ss_dssp ECC
T ss_pred Eec
Confidence 965
No 328
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=94.23 E-value=0.23 Score=51.74 Aligned_cols=70 Identities=16% Similarity=0.193 Sum_probs=52.3
Q ss_pred cccCCCEEEEEccc--hhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHH----HHHHcC--ceecCCCcCCHHh
Q 007987 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (582)
Q Consensus 107 ~l~gikkIgIIG~G--smG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~----~A~~~G--~~~~d~t~~~~~E 174 (582)
.|+| .||++||=| +++.|++..+... |+++.+.-... ..-.+ .|++.| +.. ..+++|
T Consensus 152 ~l~g-l~ia~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 220 (333)
T 1duv_G 152 AFNE-MTLVYAGDARNNMGNSMLEAAALT------GLDLRLVAPQACWPEAALVTECRALAQQNGGNITL----TEDVAK 220 (333)
T ss_dssp CGGG-CEEEEESCTTSHHHHHHHHHHHHH------CCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEE----ESCHHH
T ss_pred CCCC-cEEEEECCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEE----EECHHH
Confidence 5788 999999986 9999999999888 99887765432 11222 333677 333 578999
Q ss_pred hhccCCeEEEecc
Q 007987 175 TISGSDLVLLLIS 187 (582)
Q Consensus 175 av~~ADIVILaVP 187 (582)
++++||+|...+=
T Consensus 221 av~~aDvvytd~w 233 (333)
T 1duv_G 221 GVEGADFIYTDVW 233 (333)
T ss_dssp HHTTCSEEEECCS
T ss_pred HhCCCCEEEeCCc
Confidence 9999999998554
No 329
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=94.21 E-value=0.24 Score=51.69 Aligned_cols=70 Identities=19% Similarity=0.149 Sum_probs=52.2
Q ss_pred cccCCCEEEEEccc--hhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHH----HHHHcC--ceecCCCcCCHHh
Q 007987 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (582)
Q Consensus 107 ~l~gikkIgIIG~G--smG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~----~A~~~G--~~~~d~t~~~~~E 174 (582)
.|+| .||++||=| +++.|++..+... |+++.+.-.+. ..-.+ .|++.| +.. ..+++|
T Consensus 152 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 220 (335)
T 1dxh_A 152 PLHD-ISYAYLGDARNNMGNSLLLIGAKL------GMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTL----TEDPKE 220 (335)
T ss_dssp CGGG-CEEEEESCCSSHHHHHHHHHHHHT------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEE----ESCHHH
T ss_pred CcCC-eEEEEecCCccchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEE----EeCHHH
Confidence 5788 999999986 9999999999888 99887765432 11222 333667 333 578999
Q ss_pred hhccCCeEEEecc
Q 007987 175 TISGSDLVLLLIS 187 (582)
Q Consensus 175 av~~ADIVILaVP 187 (582)
+++++|+|...+=
T Consensus 221 av~~aDvvytd~w 233 (335)
T 1dxh_A 221 AVKGVDFVHTDVW 233 (335)
T ss_dssp HTTTCSEEEECCC
T ss_pred HhCCCCEEEeCCc
Confidence 9999999998543
No 330
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=94.13 E-value=0.041 Score=56.59 Aligned_cols=111 Identities=19% Similarity=0.154 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHHHhCCChhhhhhhhHHHHhhhcchhhhhccchhhhhccchhhhccccccccch-----hHHHHHHH
Q 007987 451 GVYAALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRF-----DYILTQQA 525 (582)
Q Consensus 451 gv~~~~~~a~~~~l~~~~~~~s~~~~e~~~e~~~~l~p~~~~~~~~~m~~~~s~ta~~g~~~~~~~~-----~~~~~~~~ 525 (582)
|..-.++-+.+|.|.+.|.++.+++.|++.|. ..+.++|...|+..|...+|.++.++.+-+.|+. ... .+++
T Consensus 200 G~lp~~ia~~~e~l~~~Gl~~~~a~~e~~~~~-~~~~~~~~~gg~~~~r~a~s~p~~~~d~~~~~~~~~~~~~~~-l~~~ 277 (338)
T 1np3_A 200 GGCVELVKAGFETLVEAGYAPEMAYFECLHEL-KLIVDLMYEGGIANMNYSISNNAEYGEYVTGPEVINAESRAA-MRNA 277 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHTTTH-HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHSCHHHHHH-HHHH
T ss_pred hhHHHHHHHHHHHHHHcCCCHHHHHHHhhhHH-HHHHHHHHhcCHHHHHHhcCCHHHHhhhhcCCccccHHHHHH-HHHH
Confidence 44555566678999999999999988887653 4566888888888888999999999999999862 222 3677
Q ss_pred HhhhcCCCcc-------------chhHHHhhhcChHHHHHHHhhccCCcce
Q 007987 526 LVAVDNDAPI-------------NGDLISNFLSDPVHGAIEVCAQLRPTVD 563 (582)
Q Consensus 526 ~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (582)
+..+++|+.+ ...+..+.++||+++.=+.-..++|-.+
T Consensus 278 ~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~g~~~r~~~~~~~ 328 (338)
T 1np3_A 278 LKRIQDGEYAKMFITEGAANYPSMTAYRRNNAAHPIEQIGEKLRAMMPWIA 328 (338)
T ss_dssp HHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHSHHHHHHHHHHTTCTTC-
T ss_pred HHHHhCCHHHHHHHHHHhcccHHHHHHHHHHhCCcHHHHHHHHHHhCcccc
Confidence 8888887433 2345666789999988888888888764
No 331
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=94.10 E-value=0.14 Score=50.09 Aligned_cols=73 Identities=23% Similarity=0.287 Sum_probs=49.5
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCccc--HHHH------HHcCceecCCCcCC---HHhhhcc
Q 007987 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEA------RAAGFTEENGTLGD---IYETISG 178 (582)
Q Consensus 111 ikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks--~~~A------~~~G~~~~d~t~~~---~~Eav~~ 178 (582)
+++|.|+|. |.+|.++++.|.+. |++|++..|+.+.. .+++ ...|+....+.+.+ +.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 77 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL------GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKN 77 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHT
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcC
Confidence 378999996 99999999999998 88887777754321 1111 23455322222333 4467788
Q ss_pred CCeEEEeccch
Q 007987 179 SDLVLLLISDA 189 (582)
Q Consensus 179 ADIVILaVPd~ 189 (582)
+|+||.++...
T Consensus 78 ~d~vi~~a~~~ 88 (308)
T 1qyc_A 78 VDVVISTVGSL 88 (308)
T ss_dssp CSEEEECCCGG
T ss_pred CCEEEECCcch
Confidence 99999988753
No 332
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=94.07 E-value=0.31 Score=50.37 Aligned_cols=69 Identities=16% Similarity=0.209 Sum_probs=51.7
Q ss_pred cccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHH----HHHHcC--ceecCCCcCCHHhh
Q 007987 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYET 175 (582)
Q Consensus 107 ~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~----~A~~~G--~~~~d~t~~~~~Ea 175 (582)
.|+| .||++||= +++.+|++..+... |+++.+.-... ..-.+ .|++.| +.. ..+++|+
T Consensus 152 ~l~g-l~va~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~----~~d~~ea 220 (315)
T 1pvv_A 152 TIKG-VKVVYVGDGNNVAHSLMIAGTKL------GADVVVATPEGYEPDEKVIKWAEQNAAESGGSFEL----LHDPVKA 220 (315)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEE----ESCHHHH
T ss_pred CcCC-cEEEEECCCcchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EeCHHHH
Confidence 4788 99999996 79999999999887 99887765532 11212 333667 333 5789999
Q ss_pred hccCCeEEEec
Q 007987 176 ISGSDLVLLLI 186 (582)
Q Consensus 176 v~~ADIVILaV 186 (582)
++++|+|+..+
T Consensus 221 v~~aDvvy~~~ 231 (315)
T 1pvv_A 221 VKDADVIYTDV 231 (315)
T ss_dssp TTTCSEEEECC
T ss_pred hCCCCEEEEcc
Confidence 99999999855
No 333
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=93.96 E-value=0.12 Score=56.24 Aligned_cols=78 Identities=19% Similarity=0.061 Sum_probs=44.4
Q ss_pred CEEEEEccchh-HHHHHHHHHHhhhhhcC-CceEEEEecCCcccH---HHHH----HcCceecCCCcCCHHhhhccCCeE
Q 007987 112 NQIGVIGWGSQ-GPAQAQNLRDSLAEAKS-DIVVKVGLRKGSRSF---AEAR----AAGFTEENGTLGDIYETISGSDLV 182 (582)
Q Consensus 112 kkIgIIG~Gsm-G~AiA~nLrds~~~~g~-G~~ViVg~r~~sks~---~~A~----~~G~~~~d~t~~~~~Eav~~ADIV 182 (582)
+||+|||.|+. |.+++..|... ..+. +.+|++.++...+.. +.+. ..+....=....|..+++++||+|
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~--~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~~eal~~AD~V 106 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDH--LEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFV 106 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHT--TTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhC--CCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCHHHHHcCCCEE
Confidence 69999999998 66666666543 0022 336666555432211 1111 112110000124778899999999
Q ss_pred EEeccchhH
Q 007987 183 LLLISDAAQ 191 (582)
Q Consensus 183 ILaVPd~a~ 191 (582)
|+++|....
T Consensus 107 Viaag~~~~ 115 (472)
T 1u8x_X 107 MAHIRVGKY 115 (472)
T ss_dssp EECCCTTHH
T ss_pred EEcCCCccc
Confidence 999997543
No 334
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.95 E-value=0.051 Score=56.42 Aligned_cols=88 Identities=13% Similarity=0.088 Sum_probs=52.2
Q ss_pred CEEEEEccchhHHHHHHHHHHh---hhhhcCCceEEE-EecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDS---LAEAKSDIVVKV-GLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds---~~~~g~G~~ViV-g~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVP 187 (582)
.+|||||+|.+|..++..|.+. +...|.+++++. .+++..+ + .++.. .....|.++++ +.|+|+.++|
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~----~--~~~~~-~~~~~d~~~ll-~iDvVve~t~ 75 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRK----P--RAIPQ-ELLRAEPFDLL-EADLVVEAMG 75 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTS----C--CSSCG-GGEESSCCCCT-TCSEEEECCC
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHH----h--hccCc-ccccCCHHHHh-CCCEEEECCC
Confidence 4799999999999999999875 111222344432 3332211 1 12211 11135677777 8999999999
Q ss_pred chhH-HHHHHHHHhcCCCCcEEEE
Q 007987 188 DAAQ-ADNYEKIFSCMKPNSILGL 210 (582)
Q Consensus 188 d~a~-~~Vl~eI~~~Lk~GaiL~~ 210 (582)
.... .+... ..|+.|+-|+.
T Consensus 76 ~~~~a~~~~~---~AL~aGKhVVt 96 (332)
T 2ejw_A 76 GVEAPLRLVL---PALEAGIPLIT 96 (332)
T ss_dssp CSHHHHHHHH---HHHHTTCCEEE
T ss_pred CcHHHHHHHH---HHHHcCCeEEE
Confidence 7643 23333 34556775554
No 335
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=93.94 E-value=0.14 Score=55.29 Aligned_cols=75 Identities=20% Similarity=0.094 Sum_probs=44.9
Q ss_pred CEEEEEccchh-HHHHHHHHHH--hhhhhcC-CceEEEEecCC--cccHH---HHH----HcCceecCCCcCCHHhhhcc
Q 007987 112 NQIGVIGWGSQ-GPAQAQNLRD--SLAEAKS-DIVVKVGLRKG--SRSFA---EAR----AAGFTEENGTLGDIYETISG 178 (582)
Q Consensus 112 kkIgIIG~Gsm-G~AiA~nLrd--s~~~~g~-G~~ViVg~r~~--sks~~---~A~----~~G~~~~d~t~~~~~Eav~~ 178 (582)
+||+|||.|+. |.+++..|.. . +. +.+|++.++.. .+... .+. ..+....=....|..+++++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~----~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~t~D~~eal~g 83 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYH----ELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDG 83 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTT----TCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCC----CCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEEeCCHHHHhCC
Confidence 68999999998 8887777765 3 12 23566655544 22111 111 12221000012477789999
Q ss_pred CCeEEEeccchh
Q 007987 179 SDLVLLLISDAA 190 (582)
Q Consensus 179 ADIVILaVPd~a 190 (582)
||+||++++...
T Consensus 84 AD~VVitagv~~ 95 (450)
T 1s6y_A 84 ADFVTTQFRVGG 95 (450)
T ss_dssp CSEEEECCCTTH
T ss_pred CCEEEEcCCCCC
Confidence 999999999643
No 336
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=93.82 E-value=0.22 Score=49.48 Aligned_cols=144 Identities=17% Similarity=0.204 Sum_probs=80.0
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc-cCCeEEEeccch
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-GSDLVLLLISDA 189 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~-~ADIVILaVPd~ 189 (582)
+||+|+|+ |.||..++..+.+. .+++++...+.+ .++++++. ++|+||=.++|.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~-----~~~elva~~d~~-------------------~dl~~~~~~~~DvvIDfT~p~ 56 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAA-----DDLTLSAELDAG-------------------DPLSLLTDGNTEVVIDFTHPD 56 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHC-----TTCEEEEEECTT-------------------CCTHHHHHTTCCEEEECSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-----CCCEEEEEEccC-------------------CCHHHHhccCCcEEEEccChH
Confidence 47999996 99999999998754 167776555432 12334443 789999888888
Q ss_pred hHHHHHHHHHhcCCCCc-EEEEecCchhhhhhcccccCC--CCCcEEEeccCCChhh--HHHHHhhcccccCCCceEEEe
Q 007987 190 AQADNYEKIFSCMKPNS-ILGLSHGFLLGHLQSMGLDFP--KNIGVIAVCPKGMGPS--VRRLYVQGKEINGAGINSSFA 264 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~Ga-iL~~a~G~~i~~~~~~~i~~p--~dv~VI~v~Pngpg~~--vR~ly~~G~e~~G~Gv~aliA 264 (582)
...+.+..... .|. +|+-+.|++-...+.-..... +++.++ ..||+.--+ ..++.+.--... ..+- ++-
T Consensus 57 a~~~~~~~a~~---~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv-~a~N~siGv~ll~~l~~~aa~~~-~die-IiE 130 (245)
T 1p9l_A 57 VVMGNLEFLID---NGIHAVVGTTGFTAERFQQVESWLVAKPNTSVL-IAPNFAIGAVLSMHFAKQAARFF-DSAE-VIE 130 (245)
T ss_dssp THHHHHHHHHH---TTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEE-ECSCCCHHHHHHHHHHHHHGGGC-SEEE-EEE
T ss_pred HHHHHHHHHHH---cCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEE-EECCccHHHHHHHHHHHHHHhhc-CCEE-EEE
Confidence 87776665333 344 444466876442211000011 144444 678765433 112222211111 1111 233
Q ss_pred ecc----C-CCHHHHHHHHHHHHHhC
Q 007987 265 VHQ----D-VDGRATNVALGWSVALG 285 (582)
Q Consensus 265 v~q----d-~tgeale~alala~aiG 285 (582)
.|. | +||.++.+++.+....+
T Consensus 131 ~HH~~K~DaPSGTA~~lae~i~~~~~ 156 (245)
T 1p9l_A 131 LHHPHKADAPSGTAARTAKLIAEARK 156 (245)
T ss_dssp EECTTCCSSSCHHHHHHHHHHHHHTT
T ss_pred CcccCCCCCCCHHHHHHHHHHHHhhc
Confidence 333 3 58888888888877655
No 337
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=93.72 E-value=0.067 Score=53.28 Aligned_cols=74 Identities=20% Similarity=0.167 Sum_probs=49.7
Q ss_pred ccCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc----CceecCCCcCC---HHhhhccC
Q 007987 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GFTEENGTLGD---IYETISGS 179 (582)
Q Consensus 108 l~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~----G~~~~d~t~~~---~~Eav~~A 179 (582)
++| +++.|+| .|-+|.+++..|.+. |.+|++..|+..+..+.+.+. ++......+.+ ..+++++.
T Consensus 117 l~g-k~vlVtGaaGGiG~aia~~L~~~------G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 189 (287)
T 1lu9_A 117 VKG-KKAVVLAGTGPVGMRSAALLAGE------GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA 189 (287)
T ss_dssp CTT-CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTC
T ss_pred CCC-CEEEEECCCcHHHHHHHHHHHHC------cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhC
Confidence 678 9999999 999999999999998 988888777644433333221 21100000222 34567778
Q ss_pred CeEEEeccc
Q 007987 180 DLVLLLISD 188 (582)
Q Consensus 180 DIVILaVPd 188 (582)
|+||.+++.
T Consensus 190 DvlVn~ag~ 198 (287)
T 1lu9_A 190 HFVFTAGAI 198 (287)
T ss_dssp SEEEECCCT
T ss_pred CEEEECCCc
Confidence 999988864
No 338
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.65 E-value=0.083 Score=56.31 Aligned_cols=70 Identities=19% Similarity=0.195 Sum_probs=50.5
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCC---cccHHHHHHcCceecCCCcCCHHhhhcc-CCeE
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG---SRSFAEARAAGFTEENGTLGDIYETISG-SDLV 182 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~---sks~~~A~~~G~~~~d~t~~~~~Eav~~-ADIV 182 (582)
.++| |+|.|||.|..|.+.|+-|++. |++|.+.++.. +...+..++.|+....+ ...++.+.+ +|+|
T Consensus 6 ~~~~-k~v~viG~G~sG~s~A~~l~~~------G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g--~~~~~~~~~~~d~v 76 (451)
T 3lk7_A 6 TFEN-KKVLVLGLARSGEAAARLLAKL------GAIVTVNDGKPFDENPTAQSLLEEGIKVVCG--SHPLELLDEDFCYM 76 (451)
T ss_dssp TTTT-CEEEEECCTTTHHHHHHHHHHT------TCEEEEEESSCGGGCHHHHHHHHTTCEEEES--CCCGGGGGSCEEEE
T ss_pred hcCC-CEEEEEeeCHHHHHHHHHHHhC------CCEEEEEeCCcccCChHHHHHHhCCCEEEEC--CChHHhhcCCCCEE
Confidence 4678 9999999999999999999999 99998777643 22334556678764211 123345566 8999
Q ss_pred EEe
Q 007987 183 LLL 185 (582)
Q Consensus 183 ILa 185 (582)
|+.
T Consensus 77 v~s 79 (451)
T 3lk7_A 77 IKN 79 (451)
T ss_dssp EEC
T ss_pred EEC
Confidence 985
No 339
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.59 E-value=0.21 Score=49.28 Aligned_cols=72 Identities=18% Similarity=0.143 Sum_probs=49.8
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHH---HHHcCceecCCCcCC---HHhhhccCCeEEE
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAE---ARAAGFTEENGTLGD---IYETISGSDLVLL 184 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~---A~~~G~~~~d~t~~~---~~Eav~~ADIVIL 184 (582)
++|.|+|. |.+|.++++.|.+. |++|++..|+.+...+. ....|+....+.+.+ +.++++++|+||.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKL------GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVIS 85 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHC------CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 58999995 99999999999998 88888777765322221 123465422222333 4567889999999
Q ss_pred eccch
Q 007987 185 LISDA 189 (582)
Q Consensus 185 aVPd~ 189 (582)
++...
T Consensus 86 ~a~~~ 90 (318)
T 2r6j_A 86 ALAFP 90 (318)
T ss_dssp CCCGG
T ss_pred CCchh
Confidence 88743
No 340
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.58 E-value=0.16 Score=51.47 Aligned_cols=66 Identities=27% Similarity=0.367 Sum_probs=40.7
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCc--eEEEEec--CCcccHHHHHH--c------CceecCCCcCCHHhhhcc
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLR--KGSRSFAEARA--A------GFTEENGTLGDIYETISG 178 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r--~~sks~~~A~~--~------G~~~~d~t~~~~~Eav~~ 178 (582)
+||+||| .|.+|.+++..|... |+ ++.+.+. ...+....+.+ . .+... ..+ .+++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~------~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~---~~~-~~a~~~ 70 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR------DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR---QGG-YEDTAG 70 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEE---ECC-GGGGTT
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEE---eCC-HHHhCC
Confidence 5899999 999999999999876 54 4554444 21111111111 0 11110 123 678999
Q ss_pred CCeEEEecc
Q 007987 179 SDLVLLLIS 187 (582)
Q Consensus 179 ADIVILaVP 187 (582)
+|+||++..
T Consensus 71 aDvVi~~ag 79 (303)
T 1o6z_A 71 SDVVVITAG 79 (303)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEcCC
Confidence 999999875
No 341
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.49 E-value=0.25 Score=44.90 Aligned_cols=70 Identities=21% Similarity=0.289 Sum_probs=46.6
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCC---HHhhhccCCeEEEecc
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~---~~Eav~~ADIVILaVP 187 (582)
|+|.|+|. |.+|.++++.|.+. |++|++..|+..+... ....++......+.+ +.+++++.|+||.+..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~------g~~V~~~~r~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~ 76 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA------GYEVTVLVRDSSRLPS-EGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLG 76 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESCGGGSCS-SSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC------CCeEEEEEeChhhccc-ccCCceEEEEecCCCHHHHHHHHcCCCEEEECcc
Confidence 78999997 99999999999998 9988877775432111 001233211111233 4467788999999876
Q ss_pred c
Q 007987 188 D 188 (582)
Q Consensus 188 d 188 (582)
.
T Consensus 77 ~ 77 (206)
T 1hdo_A 77 T 77 (206)
T ss_dssp C
T ss_pred C
Confidence 4
No 342
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.45 E-value=0.47 Score=48.58 Aligned_cols=91 Identities=19% Similarity=0.206 Sum_probs=60.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCCc--CCHHhhhc-----cC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t~--~~~~Eav~-----~A 179 (582)
.| .+|.|+|.|.+|...++-++.. |. +|++ ...+.+..+.+++.|.... |..- .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~-~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~ 262 (373)
T 1p0f_A 191 PG-STCAVFGLGGVGFSAIVGCKAA------GASRIIG-VGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGV 262 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEE-ECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-ECCCHHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCC
Confidence 46 8999999999999999999888 87 5654 4444556788888886420 1000 12333332 47
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCC-cEEEE
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~G-aiL~~ 210 (582)
|+||-++... +.++.....++++ -.++.
T Consensus 263 Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~ 291 (373)
T 1p0f_A 263 DYAVECAGRI---ETMMNALQSTYCGSGVTVV 291 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECCCCH---HHHHHHHHHHhcCCCEEEE
Confidence 9999998752 2355556677776 55443
No 343
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.43 E-value=0.52 Score=49.05 Aligned_cols=95 Identities=18% Similarity=0.169 Sum_probs=60.8
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc------cCC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~------~AD 180 (582)
.| .+|.|+|.|.+|...++-++.. |. +|+ +...+++..+.+++.|.... +..-.+..+.+. ..|
T Consensus 213 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi-~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D 284 (404)
T 3ip1_A 213 PG-DNVVILGGGPIGLAAVAILKHA------GASKVI-LSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAK 284 (404)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEE-EECSCHHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEE-EECCCHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCC
Confidence 56 8999999999999999999988 88 654 44444556788888886420 111123333222 589
Q ss_pred eEEEeccch--hHHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDA--AQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~--a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+||-++... .....++-+...++++-.++..
T Consensus 285 ~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 285 LFLEATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp EEEECSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred EEEECCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 999999876 2222333332334776655544
No 344
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.32 E-value=0.17 Score=51.93 Aligned_cols=70 Identities=11% Similarity=0.095 Sum_probs=42.7
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCc-------eEEEEecCC---cc-cHHHH--HHcC---ceecCCCcCCHHh
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRKG---SR-SFAEA--RAAG---FTEENGTLGDIYE 174 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~-------~ViVg~r~~---sk-s~~~A--~~~G---~~~~d~t~~~~~E 174 (582)
+||+|||. |.+|.+++..|... |+ ++++.++.. .. ....+ ...+ +...-....+..+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~------~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~ 79 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANG------DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMT 79 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHH
T ss_pred CEEEEECCCChHHHHHHHHHHhC------CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHH
Confidence 68999997 99999999999877 54 555543330 11 11111 1122 1100000246788
Q ss_pred hhccCCeEEEecc
Q 007987 175 TISGSDLVLLLIS 187 (582)
Q Consensus 175 av~~ADIVILaVP 187 (582)
++++||+||++..
T Consensus 80 al~~aD~Vi~~ag 92 (329)
T 1b8p_A 80 AFKDADVALLVGA 92 (329)
T ss_dssp HTTTCSEEEECCC
T ss_pred HhCCCCEEEEeCC
Confidence 9999999998754
No 345
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=93.28 E-value=0.2 Score=51.59 Aligned_cols=94 Identities=12% Similarity=0.057 Sum_probs=53.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhh--hhcCCceEE-EEecCCcccHH--------HHH-HcCceecCCCcC---CHHhhh
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLA--EAKSDIVVK-VGLRKGSRSFA--------EAR-AAGFTEENGTLG---DIYETI 176 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~--~~g~G~~Vi-Vg~r~~sks~~--------~A~-~~G~~~~d~t~~---~~~Eav 176 (582)
.+|||||+|.||..++..|.+.-. ..|.+++++ |.+++..+..+ ... ..++.. ... +.++++
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~ll 83 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISYKEKGSLDS---LEYESISASEAL 83 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHHHHTTCGGG---CCSEECCHHHHH
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhhhccCCccc---ccCCCCCHHHHh
Confidence 579999999999999999987510 011124443 33333322111 111 123210 023 777776
Q ss_pred -ccCCeEEEeccch----hHHHHHHHHHhcCCCCcEEEEe
Q 007987 177 -SGSDLVLLLISDA----AQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 177 -~~ADIVILaVPd~----a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
.+.|+|+.++|.. .+.+++. ..|+.|+-|+.+
T Consensus 84 ~~~iDvVv~~t~~~~~~~~~~~~~~---~AL~aGkhVvta 120 (331)
T 3c8m_A 84 ARDFDIVVDATPASADGKKELAFYK---ETFENGKDVVTA 120 (331)
T ss_dssp HSSCSEEEECSCCCSSSHHHHHHHH---HHHHTTCEEEEC
T ss_pred CCCCCEEEECCCCCCccchHHHHHH---HHHHCCCeEEec
Confidence 3689999999985 4444443 345567766543
No 346
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=93.25 E-value=0.17 Score=54.21 Aligned_cols=68 Identities=22% Similarity=0.203 Sum_probs=49.0
Q ss_pred cCCCEEEEEccchhHHH-HHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 109 NGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+++|.|||+|-.|.+ +|+-|.+. |++|.+.+...+...+..++.|+....+ .+. +.++.+|+||+.
T Consensus 16 ~~~~~i~viG~G~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~g--~~~-~~~~~a~~vv~s 84 (475)
T 1p3d_A 16 RRVQQIHFIGIGGAGMSGIAEILLNE------GYQISGSDIADGVVTQRLAQAGAKIYIG--HAE-EHIEGASVVVVS 84 (475)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHH------TCEEEEEESCCSHHHHHHHHTTCEEEES--CCG-GGGTTCSEEEEC
T ss_pred ccCCEEEEEeecHHHHHHHHHHHHhC------CCEEEEECCCCCHHHHHHHhCCCEEECC--CCH-HHcCCCCEEEEC
Confidence 44589999999999997 99999998 9998777665544344556678765222 122 346789998884
No 347
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.21 E-value=0.15 Score=55.07 Aligned_cols=69 Identities=17% Similarity=0.165 Sum_probs=51.7
Q ss_pred CCEEEEEccchhHHH-HHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe--cc
Q 007987 111 INQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL--IS 187 (582)
Q Consensus 111 ikkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa--VP 187 (582)
+|+|.|||.|-.|.+ +|+-|++. |++|.+.+...+...+..++.|+... .....+.+.++|+||+. +|
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~---~g~~~~~~~~~d~vV~Spgi~ 92 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNSVTQHLTALGAQIY---FHHRPENVLDASVVVVSTAIS 92 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEE---SSCCGGGGTTCSEEEECTTSC
T ss_pred CCEEEEEEEcHhhHHHHHHHHHhC------CCeEEEEECCCCHHHHHHHHCCCEEE---CCCCHHHcCCCCEEEECCCCC
Confidence 489999999999996 99999999 99998777665555566677888752 22233456789999984 55
Q ss_pred c
Q 007987 188 D 188 (582)
Q Consensus 188 d 188 (582)
+
T Consensus 93 ~ 93 (494)
T 4hv4_A 93 A 93 (494)
T ss_dssp T
T ss_pred C
Confidence 4
No 348
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=93.18 E-value=0.36 Score=49.79 Aligned_cols=71 Identities=14% Similarity=0.081 Sum_probs=50.5
Q ss_pred ccc-CCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHHHH----HHcCceecCCCcCCHHhhh
Q 007987 107 AFN-GINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEA----RAAGFTEENGTLGDIYETI 176 (582)
Q Consensus 107 ~l~-gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~~A----~~~G~~~~d~t~~~~~Eav 176 (582)
.|+ | .||++||= +++..|++..+... |.++.+.-.++ ..-.+.+ ++.|... ....+++|++
T Consensus 142 ~l~~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~--~~~~d~~eav 212 (307)
T 3tpf_A 142 MQNGI-AKVAFIGDSNNMCNSWLITAAIL------GFEISIAMPKNYKISPEIWEFAMKQALISGAKI--SLGYDKFEAL 212 (307)
T ss_dssp CGGGC-CEEEEESCSSHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEE--EEESCHHHHH
T ss_pred CCCCC-CEEEEEcCCCccHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeE--EEEcCHHHHh
Confidence 477 9 99999994 58999999999887 98887765432 1122222 3555431 0157899999
Q ss_pred ccCCeEEEec
Q 007987 177 SGSDLVLLLI 186 (582)
Q Consensus 177 ~~ADIVILaV 186 (582)
+++|+|+..+
T Consensus 213 ~~aDvvyt~~ 222 (307)
T 3tpf_A 213 KDKDVVITDT 222 (307)
T ss_dssp TTCSEEEECC
T ss_pred cCCCEEEecC
Confidence 9999999876
No 349
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=93.14 E-value=0.15 Score=52.30 Aligned_cols=92 Identities=17% Similarity=0.222 Sum_probs=61.2
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCc--ccHHHHHHcCceecCCCcCCHHhhh----ccCC
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDIYETI----SGSD 180 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~s--ks~~~A~~~G~~~~d~t~~~~~Eav----~~AD 180 (582)
.++| ++|.|+|.|.+|...++.++.. |.+|++..++.. +..+.+++.|....| .- +..+.+ ...|
T Consensus 178 ~~~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 178 TLNC-RKVLVVGTGPIGVLFTLLFRTY------GLEVWMANRREPTEVEQTVIEETKTNYYN-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp SSTT-CEEEEESCHHHHHHHHHHHHHH------TCEEEEEESSCCCHHHHHHHHHHTCEEEE-CT-TCSHHHHHHHCCEE
T ss_pred cCCC-CEEEEECCCHHHHHHHHHHHhC------CCEEEEEeCCccchHHHHHHHHhCCceec-hH-HHHHHHHHhCCCCC
Confidence 3558 9999999999999999999988 888776665540 335777788875311 11 211222 3589
Q ss_pred eEEEeccchhHHHHH-HHHHhcCCCCcEEEE
Q 007987 181 LVLLLISDAAQADNY-EKIFSCMKPNSILGL 210 (582)
Q Consensus 181 IVILaVPd~a~~~Vl-~eI~~~Lk~GaiL~~ 210 (582)
+||-++.... .+ +...+.|+++..++.
T Consensus 249 ~vid~~g~~~---~~~~~~~~~l~~~G~iv~ 276 (366)
T 2cdc_A 249 VIIDATGADV---NILGNVIPLLGRNGVLGL 276 (366)
T ss_dssp EEEECCCCCT---HHHHHHGGGEEEEEEEEE
T ss_pred EEEECCCChH---HHHHHHHHHHhcCCEEEE
Confidence 9999988542 23 555666766554443
No 350
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.11 E-value=0.52 Score=48.33 Aligned_cols=91 Identities=19% Similarity=0.252 Sum_probs=59.8
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCCc--CCHHhhhc-----cC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t~--~~~~Eav~-----~A 179 (582)
.| .+|.|+|.|.+|...++-++.. |. +|++ ...+++..+.+++.|.... |..- .+..+.+. ..
T Consensus 195 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~-~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 266 (376)
T 1e3i_A 195 PG-STCAVFGLGCVGLSAIIGCKIA------GASRIIA-IDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGV 266 (376)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEE-ECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-EcCCHHHHHHHHHhCCcEEEccccccchHHHHHHHHhCCCc
Confidence 46 8999999999999999999888 88 6654 4444556788888886420 1000 12333332 47
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCC-cEEEE
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~G-aiL~~ 210 (582)
|+||-++... +.++.....++++ -.++.
T Consensus 267 Dvvid~~G~~---~~~~~~~~~l~~~~G~iv~ 295 (376)
T 1e3i_A 267 DYSLDCAGTA---QTLKAAVDCTVLGWGSCTV 295 (376)
T ss_dssp SEEEESSCCH---HHHHHHHHTBCTTTCEEEE
T ss_pred cEEEECCCCH---HHHHHHHHHhhcCCCEEEE
Confidence 9999998752 2355556677776 54443
No 351
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.09 E-value=0.17 Score=51.43 Aligned_cols=89 Identities=19% Similarity=0.246 Sum_probs=62.6
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccc
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd 188 (582)
.| .+|.|+|.|.+|...++-++.. |.+|++..++ ++..+.+++.|... ...+.+++.+..|+||-++..
T Consensus 176 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~---v~~~~~~~~~~~D~vid~~g~ 244 (348)
T 3two_A 176 KG-TKVGVAGFGGLGSMAVKYAVAM------GAEVSVFARN-EHKKQDALSMGVKH---FYTDPKQCKEELDFIISTIPT 244 (348)
T ss_dssp TT-CEEEEESCSHHHHHHHHHHHHT------TCEEEEECSS-STTHHHHHHTTCSE---EESSGGGCCSCEEEEEECCCS
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCeEEEEeCC-HHHHHHHHhcCCCe---ecCCHHHHhcCCCEEEECCCc
Confidence 57 8999999999999999999988 8887655544 45578889998753 122333333478999999986
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEe
Q 007987 189 AAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
.. .++.....++++-.++..
T Consensus 245 ~~---~~~~~~~~l~~~G~iv~~ 264 (348)
T 3two_A 245 HY---DLKDYLKLLTYNGDLALV 264 (348)
T ss_dssp CC---CHHHHHTTEEEEEEEEEC
T ss_pred HH---HHHHHHHHHhcCCEEEEE
Confidence 52 244455567776655544
No 352
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.07 E-value=0.17 Score=51.42 Aligned_cols=92 Identities=18% Similarity=0.181 Sum_probs=60.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc------cCC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~------~AD 180 (582)
.| ++|.|+|.|.+|.+.++-++.. |. +|++..++ ++..+.+++.|.... +....+..+.+. ..|
T Consensus 167 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 167 SG-KSVLITGAGPLGLLGIAVAKAS------GAYPVIVSEPS-DFRRELAKKVGADYVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHT------TCCSEEEECSC-HHHHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECCC-HHHHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCC
Confidence 78 8999999999999999999988 88 77655544 455677888886310 111123333332 579
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+||-++... +.++...+.++++..++..
T Consensus 239 ~vid~~g~~---~~~~~~~~~l~~~G~iv~~ 266 (348)
T 2d8a_A 239 VFLEFSGAP---KALEQGLQAVTPAGRVSLL 266 (348)
T ss_dssp EEEECSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCCH---HHHHHHHHHHhcCCEEEEE
Confidence 999999852 2344555566665555443
No 353
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=93.06 E-value=0.17 Score=55.00 Aligned_cols=89 Identities=17% Similarity=0.165 Sum_probs=56.6
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCC-H-HhhhccCCeEEEeccch
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD-I-YETISGSDLVLLLISDA 189 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~-~-~Eav~~ADIVILaVPd~ 189 (582)
++|.|||+|..|..+|+.|.+. |+++++-+.+..+ .+.+. -+...|.+-.+ + +.-+++||.++.+++++
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~------g~~v~vid~d~~~-~~~~~--~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d 419 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRK------PVPFILIDRQESP-VCNDH--VVVYGDATVGQTLRQAGIDRASGIIVTTNDD 419 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEESSCCS-SCCSS--CEEESCSSSSTHHHHHTTTSCSEEEECCSCH
T ss_pred CCEEEECCCHHHHHHHHHHHHC------CCCEEEEECChHH-HhhcC--CEEEeCCCCHHHHHhcCccccCEEEEECCCc
Confidence 6799999999999999999998 9988776655433 22221 23322322222 2 23478899999999987
Q ss_pred hHHHHHHHHHhcCCCC-cEEE
Q 007987 190 AQADNYEKIFSCMKPN-SILG 209 (582)
Q Consensus 190 a~~~Vl~eI~~~Lk~G-aiL~ 209 (582)
...-+.-.++..+.+. .+|.
T Consensus 420 ~~ni~~~~~ak~l~~~~~iia 440 (565)
T 4gx0_A 420 STNIFLTLACRHLHSHIRIVA 440 (565)
T ss_dssp HHHHHHHHHHHHHCSSSEEEE
T ss_pred hHHHHHHHHHHHHCCCCEEEE
Confidence 5433333444555555 3444
No 354
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.03 E-value=0.25 Score=48.15 Aligned_cols=71 Identities=18% Similarity=0.201 Sum_probs=48.3
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCC-c-----ccHH---HHHHcCceecCCCcCC---HHhhhcc
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-S-----RSFA---EARAAGFTEENGTLGD---IYETISG 178 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~-s-----ks~~---~A~~~G~~~~d~t~~~---~~Eav~~ 178 (582)
++|.|+|. |.+|.++++.|.+. |++|++..|+. . ...+ .....|+....+.+.+ +.+++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKA------GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHH------TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred cEEEEECCCchHHHHHHHHHHhC------CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhC
Confidence 78999996 99999999999998 88887777764 1 1111 1123455321122333 4567888
Q ss_pred CCeEEEeccc
Q 007987 179 SDLVLLLISD 188 (582)
Q Consensus 179 ADIVILaVPd 188 (582)
.|+||.+...
T Consensus 77 ~d~vi~~a~~ 86 (307)
T 2gas_A 77 VDIVICAAGR 86 (307)
T ss_dssp CSEEEECSSS
T ss_pred CCEEEECCcc
Confidence 9999998875
No 355
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.03 E-value=0.25 Score=49.53 Aligned_cols=72 Identities=19% Similarity=0.218 Sum_probs=50.4
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHH------HHcCceecCCCcCC---HHhhhc--cC
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA------RAAGFTEENGTLGD---IYETIS--GS 179 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A------~~~G~~~~d~t~~~---~~Eav~--~A 179 (582)
++|.|+|. |.+|.+++..|.+. |++|++..|..+...+++ ...|+....+.+.+ +.++++ ++
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~------g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDA------HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHT------TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CeEEEECCCcHHHHHHHHHHHHC------CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCC
Confidence 78999997 99999999999998 888888777642222222 23455432222334 446777 89
Q ss_pred CeEEEeccch
Q 007987 180 DLVLLLISDA 189 (582)
Q Consensus 180 DIVILaVPd~ 189 (582)
|+||.+....
T Consensus 85 d~Vi~~a~~~ 94 (346)
T 3i6i_A 85 DIVVSTVGGE 94 (346)
T ss_dssp CEEEECCCGG
T ss_pred CEEEECCchh
Confidence 9999988763
No 356
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=92.98 E-value=0.22 Score=51.35 Aligned_cols=69 Identities=22% Similarity=0.249 Sum_probs=51.8
Q ss_pred cccCCCEEEEEccc--hhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHH----HHHHcC--ceecCCCcCCHHh
Q 007987 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (582)
Q Consensus 107 ~l~gikkIgIIG~G--smG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~----~A~~~G--~~~~d~t~~~~~E 174 (582)
.|+| .||++||=| ++..|++..+... |+++.+.-.++ ..-.+ .|.+.| +.. ..+++|
T Consensus 145 ~l~g-l~va~vGD~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~e 213 (307)
T 2i6u_A 145 ALRG-LRLSYFGDGANNMAHSLLLGGVTA------GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTV----TADAHA 213 (307)
T ss_dssp CCTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEE----ESCHHH
T ss_pred CcCC-eEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHHH
Confidence 4788 999999986 9999999999888 99887775542 11112 233667 433 578999
Q ss_pred hhccCCeEEEec
Q 007987 175 TISGSDLVLLLI 186 (582)
Q Consensus 175 av~~ADIVILaV 186 (582)
+++++|+|+..+
T Consensus 214 av~~aDvvy~~~ 225 (307)
T 2i6u_A 214 AAAGADVLVTDT 225 (307)
T ss_dssp HHTTCSEEEECC
T ss_pred HhcCCCEEEecc
Confidence 999999999854
No 357
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.95 E-value=0.59 Score=47.89 Aligned_cols=91 Identities=19% Similarity=0.245 Sum_probs=59.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCCc--CCHHhhhc-----cC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t~--~~~~Eav~-----~A 179 (582)
.| .+|.|+|.|.+|...++-++.. |. +|++ ...+++..+.+++.|.... |..- .+..+.+. ..
T Consensus 192 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 263 (374)
T 1cdo_A 192 PG-STCAVFGLGAVGLAAVMGCHSA------GAKRIIA-VDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGV 263 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEE-ECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEE-EcCCHHHHHHHHHhCCceEEeccccchhHHHHHHHHhCCCC
Confidence 46 8999999999999999999988 88 5654 4444556788888886420 1000 12333332 47
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCC-cEEEE
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~G-aiL~~ 210 (582)
|+||-++... ..++.....++++ -.++.
T Consensus 264 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~ 292 (374)
T 1cdo_A 264 DFSLECVGNV---GVMRNALESCLKGWGVSVL 292 (374)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECCCCH---HHHHHHHHHhhcCCcEEEE
Confidence 9999998753 2355556677776 54443
No 358
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.94 E-value=0.55 Score=48.13 Aligned_cols=91 Identities=22% Similarity=0.318 Sum_probs=59.3
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCCc--CCHHhhhc-----cC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t~--~~~~Eav~-----~A 179 (582)
.| .+|.|+|.|.+|...++-++.. |. +|++ ...+++..+.+++.|.... |..- .+..+.+. ..
T Consensus 191 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~ 262 (374)
T 2jhf_A 191 QG-STCAVFGLGGVGLSVIMGCKAA------GAARIIG-VDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGV 262 (374)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEE-ECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-EcCCHHHHHHHHHhCCceEecccccchhHHHHHHHHhCCCC
Confidence 46 8999999999999999999988 88 5654 4444556788888886420 1000 12333332 47
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCC-cEEEE
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~G-aiL~~ 210 (582)
|+||-++... +.++.....++++ -.++.
T Consensus 263 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~ 291 (374)
T 2jhf_A 263 DFSFEVIGRL---DTMVTALSCCQEAYGVSVI 291 (374)
T ss_dssp SEEEECSCCH---HHHHHHHHHBCTTTCEEEE
T ss_pred cEEEECCCCH---HHHHHHHHHhhcCCcEEEE
Confidence 9999999753 2345555567776 55443
No 359
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=92.92 E-value=0.28 Score=45.84 Aligned_cols=69 Identities=16% Similarity=0.196 Sum_probs=47.2
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCC----HHhhhccCCeEEEec
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD----IYETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~----~~Eav~~ADIVILaV 186 (582)
|||.|+| .|.+|.++++.|.+. |++|++..|+..+..+. .++....+.+.+ +.+++++.|+||.+.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT------DYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS------SCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 4799999 799999999999998 99988877764332111 233211122333 445778899999988
Q ss_pred cch
Q 007987 187 SDA 189 (582)
Q Consensus 187 Pd~ 189 (582)
...
T Consensus 72 g~~ 74 (219)
T 3dqp_A 72 GSG 74 (219)
T ss_dssp CCT
T ss_pred cCC
Confidence 643
No 360
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=92.87 E-value=0.14 Score=52.83 Aligned_cols=69 Identities=17% Similarity=0.185 Sum_probs=48.3
Q ss_pred cccCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCC--cccHHHHHHcC--ceecCCCcCCHHhhhccCCe
Q 007987 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG--SRSFAEARAAG--FTEENGTLGDIYETISGSDL 181 (582)
Q Consensus 107 ~l~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~--sks~~~A~~~G--~~~~d~t~~~~~Eav~~ADI 181 (582)
.|+| .||++|| .+++..|++..+... |+++.+.-..+ ....-.+++.| +.. ..+++|+++++|+
T Consensus 151 ~l~g-lkva~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~g~~v~~----~~d~~eav~~aDv 219 (309)
T 4f2g_A 151 PIRG-KTVAWVGDANNMLYTWIQAARIL------DFKLQLSTPPGYALDAKLVDAESAPFYQV----FDDPNEACKGADL 219 (309)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCGGGCCCGGGSCGGGGGGEEE----CSSHHHHTTTCSE
T ss_pred CCCC-CEEEEECCCcchHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHcCCeEEE----EcCHHHHhcCCCE
Confidence 4788 9999999 458999999999887 98877664421 11000122333 333 5689999999999
Q ss_pred EEEec
Q 007987 182 VLLLI 186 (582)
Q Consensus 182 VILaV 186 (582)
|+..+
T Consensus 220 vyt~~ 224 (309)
T 4f2g_A 220 VTTDV 224 (309)
T ss_dssp EEECC
T ss_pred EEecc
Confidence 99865
No 361
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=92.78 E-value=0.22 Score=51.74 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=52.0
Q ss_pred cccCCCEEEEEccc--hhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHH----HHHHcC--ceecCCCcCCHHh
Q 007987 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (582)
Q Consensus 107 ~l~gikkIgIIG~G--smG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~----~A~~~G--~~~~d~t~~~~~E 174 (582)
.|+| .||++||=| ++..|++..+... |+++.+.-.++ ..-.+ .|++.| +.. ..+++|
T Consensus 164 ~l~g-l~va~vGD~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 232 (325)
T 1vlv_A 164 RLKG-VKVVFMGDTRNNVATSLMIACAKM------GMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSF----TSNLEE 232 (325)
T ss_dssp CSTT-CEEEEESCTTSHHHHHHHHHHHHT------TCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEE----ESCHHH
T ss_pred CcCC-cEEEEECCCCcCcHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EcCHHH
Confidence 4788 999999985 9999999999887 99887765432 11222 333667 333 578999
Q ss_pred hhccCCeEEEecc
Q 007987 175 TISGSDLVLLLIS 187 (582)
Q Consensus 175 av~~ADIVILaVP 187 (582)
+++++|+|...+=
T Consensus 233 av~~aDvvyt~~w 245 (325)
T 1vlv_A 233 ALAGADVVYTDVW 245 (325)
T ss_dssp HHTTCSEEEECCC
T ss_pred HHccCCEEEeccc
Confidence 9999999998543
No 362
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.73 E-value=0.6 Score=47.75 Aligned_cols=91 Identities=20% Similarity=0.202 Sum_probs=59.8
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCCc--CCHHhhhc-----cC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTL--GDIYETIS-----GS 179 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t~--~~~~Eav~-----~A 179 (582)
.| .+|.|+|.|.+|...++-++.. |. +|++ ...+++..+.+++.|.... +..- .+..+.++ ..
T Consensus 190 ~g-~~VlV~GaG~vG~~avqla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~ 261 (373)
T 2fzw_A 190 PG-SVCAVFGLGGVGLAVIMGCKVA------GASRIIG-VDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGV 261 (373)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEE-ECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-EcCCHHHHHHHHHcCCceEeccccccccHHHHHHHHhCCCC
Confidence 46 8999999999999999999988 88 5654 4444555788888886420 1000 12333332 47
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCC-cEEEE
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGL 210 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~G-aiL~~ 210 (582)
|+||-++... ..++.....++++ -.++.
T Consensus 262 D~vid~~g~~---~~~~~~~~~l~~~~G~iv~ 290 (373)
T 2fzw_A 262 DYSFECIGNV---KVMRAALEACHKGWGVSVV 290 (373)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEE
T ss_pred CEEEECCCcH---HHHHHHHHhhccCCcEEEE
Confidence 9999998753 2355556677776 55443
No 363
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=92.70 E-value=0.27 Score=50.94 Aligned_cols=69 Identities=16% Similarity=0.171 Sum_probs=48.4
Q ss_pred cccCCCEEEEEccc-hhHHHHHHHHHHhhhhhcCCceEEEEecCCc----ccHHH----HHHcC--ceecCCCcCCHHhh
Q 007987 107 AFNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS----RSFAE----ARAAG--FTEENGTLGDIYET 175 (582)
Q Consensus 107 ~l~gikkIgIIG~G-smG~AiA~nLrds~~~~g~G~~ViVg~r~~s----ks~~~----A~~~G--~~~~d~t~~~~~Ea 175 (582)
.|+| .||++||=| ++.+|++..+... |+++.+.-..+- .-.+. |++.| +.. ..+++|+
T Consensus 152 ~l~g-l~va~vGD~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~----~~d~~ea 220 (321)
T 1oth_A 152 SLKG-LTLSWIGDGNNILHSIMMSAAKF------GMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLL----TNDPLEA 220 (321)
T ss_dssp CCTT-CEEEEESCSSHHHHHHHTTTGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEE----ESCHHHH
T ss_pred CcCC-cEEEEECCchhhHHHHHHHHHHc------CCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EECHHHH
Confidence 4788 999999986 4777777777666 888877655421 11222 22455 333 5789999
Q ss_pred hccCCeEEEec
Q 007987 176 ISGSDLVLLLI 186 (582)
Q Consensus 176 v~~ADIVILaV 186 (582)
++++|+|+..+
T Consensus 221 v~~aDvvy~d~ 231 (321)
T 1oth_A 221 AHGGNVLITDT 231 (321)
T ss_dssp HTTCSEEEECC
T ss_pred hccCCEEEEec
Confidence 99999999965
No 364
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=92.69 E-value=0.12 Score=54.14 Aligned_cols=90 Identities=16% Similarity=0.164 Sum_probs=54.7
Q ss_pred CCEEEEEc-cchhHHHHHHHHHHhhhhhcCC------ceEEEEecCC--cccHHHH----HH-cCceecCCCcCCHHhhh
Q 007987 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSD------IVVKVGLRKG--SRSFAEA----RA-AGFTEENGTLGDIYETI 176 (582)
Q Consensus 111 ikkIgIIG-~GsmG~AiA~nLrds~~~~g~G------~~ViVg~r~~--sks~~~A----~~-~G~~~~d~t~~~~~Eav 176 (582)
|+||+||| .|.+|..+.+.|.+. + ++++...+.. .+..... .. ..+... -.+. +.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~------~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~---~~~~-~~~ 78 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGH------PAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVE---PTEA-AVL 78 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC------HHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCE---ECCH-HHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC------CCCCCccEEEEEEECCCcCCCchhhhcccccccceeeec---cCCH-HHh
Confidence 37999999 999999999999876 4 3544433221 1211110 00 011110 1233 345
Q ss_pred ccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 177 ~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
.++|+||+|+|.....++.+.+ +.|..|++.++.
T Consensus 79 ~~~DvVf~alg~~~s~~~~~~~----~~G~~vIDlSa~ 112 (352)
T 2nqt_A 79 GGHDAVFLALPHGHSAVLAQQL----SPETLIIDCGAD 112 (352)
T ss_dssp TTCSEEEECCTTSCCHHHHHHS----CTTSEEEECSST
T ss_pred cCCCEEEECCCCcchHHHHHHH----hCCCEEEEECCC
Confidence 6899999999988766666544 467777776653
No 365
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.61 E-value=0.53 Score=47.36 Aligned_cols=94 Identities=17% Similarity=0.121 Sum_probs=61.2
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhh------ccCC
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav------~~AD 180 (582)
..| ++|.|+|.|.+|...++.++.. |..+++..+.+++..+.+++.|.... |..-.+..+.+ ...|
T Consensus 159 ~~g-~~VlV~GaG~vG~~aiq~ak~~------G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~~~g~d 231 (346)
T 4a2c_A 159 CEN-KNVIIIGAGTIGLLAIQCAVAL------GAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQ 231 (346)
T ss_dssp CTT-SEEEEECCSHHHHHHHHHHHHT------TCSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHGGGCSSE
T ss_pred CCC-CEEEEECCCCcchHHHHHHHHc------CCcEEEEEechHHHHHHHHHcCCeEEEeCCCCCHHHHHHhhcccCCcc
Confidence 457 8999999999999999999988 87665555555566788999996421 11112233322 2368
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+|+-++... ..++.....++++..++..
T Consensus 232 ~v~d~~G~~---~~~~~~~~~l~~~G~~v~~ 259 (346)
T 4a2c_A 232 LILETAGVP---QTVELAVEIAGPHAQLALV 259 (346)
T ss_dssp EEEECSCSH---HHHHHHHHHCCTTCEEEEC
T ss_pred ccccccccc---chhhhhhheecCCeEEEEE
Confidence 888887643 2344445566776665543
No 366
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=92.56 E-value=0.32 Score=50.17 Aligned_cols=92 Identities=21% Similarity=0.234 Sum_probs=61.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc--------c
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS--------G 178 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~--------~ 178 (582)
.| .+|.|+|.|.+|...++-++.. |. +|+ ..+.+++..+.+++.|+... |....+..+.+. .
T Consensus 182 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi-~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~i~~~~~~~~gg 253 (370)
T 4ej6_A 182 AG-STVAILGGGVIGLLTVQLARLA------GATTVI-LSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGG 253 (370)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEE-EECSCHHHHHHHHHHTCSEEECTTSSCHHHHHHSTTSSSTTC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEE-EECCCHHHHHHHHHcCCCEEECCCCcCHHHHHHhhhhccCCC
Confidence 57 8999999999999999999988 88 554 44444556788888887421 211223444444 3
Q ss_pred CCeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 179 ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
.|+||-++... +.++.....++++-.++..
T Consensus 254 ~Dvvid~~G~~---~~~~~~~~~l~~~G~vv~~ 283 (370)
T 4ej6_A 254 VDVVIECAGVA---ETVKQSTRLAKAGGTVVIL 283 (370)
T ss_dssp EEEEEECSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred CCEEEECCCCH---HHHHHHHHHhccCCEEEEE
Confidence 79999998743 2344555566666655544
No 367
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=92.54 E-value=0.25 Score=51.28 Aligned_cols=84 Identities=14% Similarity=0.167 Sum_probs=57.6
Q ss_pred eeeeccccccccc------------cccccCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccH
Q 007987 92 YIVRGGRDLFNLL------------PDAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSF 154 (582)
Q Consensus 92 ~i~~~~r~~f~~~------------~~~l~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~ 154 (582)
.|+.+|.+.+.-. ...|+| .||++|| .+++..|++..+... |+++.+.-..+ ....
T Consensus 127 PVINag~~~~HPtQaLaDl~Ti~e~~g~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~ 199 (323)
T 3gd5_A 127 PVINALTDHEHPCQVVADLLTIRENFGRLAG-LKLAYVGDGNNVAHSLLLGCAKV------GMSIAVATPEGFTPDPAVS 199 (323)
T ss_dssp CEEEEECSSCCHHHHHHHHHHHHHHHSCCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHH
T ss_pred CEEeCCCCCCCcHHHHHHHHHHHHHhCCCCC-CEEEEECCCCcHHHHHHHHHHHc------CCEEEEECCCcccCCHHHH
Confidence 5777776544211 134788 9999999 468999999999877 98887765432 1222
Q ss_pred HH----HHHcC--ceecCCCcCCHHhhhccCCeEEEec
Q 007987 155 AE----ARAAG--FTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 155 ~~----A~~~G--~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
+. +.+.| +.. ..+++|+++++|+|+..+
T Consensus 200 ~~~~~~a~~~g~~v~~----~~d~~eav~~aDvvyt~~ 233 (323)
T 3gd5_A 200 ARASEIAGRTGAEVQI----LRDPFEAARGAHILYTDV 233 (323)
T ss_dssp HHHHHHHHHHTCCEEE----ESCHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCeEEE----ECCHHHHhcCCCEEEEec
Confidence 22 33446 333 578999999999998865
No 368
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.48 E-value=0.47 Score=48.79 Aligned_cols=92 Identities=20% Similarity=0.267 Sum_probs=60.8
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCC--cCCHHhhhc-----cC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT--LGDIYETIS-----GS 179 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t--~~~~~Eav~-----~A 179 (582)
.| .+|.|+|.|.+|...++-++.. |. +|++. ..+++..+.+++.|+... +.. ..+..+.++ ..
T Consensus 193 ~g-~~VlV~GaG~vG~~a~q~a~~~------Ga~~Vi~~-~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 193 PG-SNVAIFGLGTVGLAVAEGAKTA------GASRIIGI-DIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHH------TCSCEEEE-CSCTTHHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCB
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEEE-cCCHHHHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCC
Confidence 56 8999999999999999999988 88 56544 434455788999887420 100 122333332 48
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCC-cEEEEe
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPN-SILGLS 211 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~G-aiL~~a 211 (582)
|+||-++... ..++.....+++| -.++..
T Consensus 265 D~vid~~g~~---~~~~~~~~~l~~g~G~iv~~ 294 (378)
T 3uko_A 265 DYSFECIGNV---SVMRAALECCHKGWGTSVIV 294 (378)
T ss_dssp SEEEECSCCH---HHHHHHHHTBCTTTCEEEEC
T ss_pred CEEEECCCCH---HHHHHHHHHhhccCCEEEEE
Confidence 9999998863 2355556677774 444433
No 369
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=92.42 E-value=0.4 Score=46.90 Aligned_cols=72 Identities=15% Similarity=0.186 Sum_probs=48.4
Q ss_pred CCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCccc-HHHH------HHcCceecCCCcCC---HHhhhccC
Q 007987 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEA------RAAGFTEENGTLGD---IYETISGS 179 (582)
Q Consensus 111 ikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks-~~~A------~~~G~~~~d~t~~~---~~Eav~~A 179 (582)
+++|.|+| .|.+|.+++..|.+. |++|++..|+.+.. .+.+ ...|+....+.+.+ +.++++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~ 77 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL------GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQV 77 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT------TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC------CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCC
Confidence 37899999 599999999999998 88887777764221 1111 12455322222333 45678889
Q ss_pred CeEEEeccc
Q 007987 180 DLVLLLISD 188 (582)
Q Consensus 180 DIVILaVPd 188 (582)
|+||.+...
T Consensus 78 d~vi~~a~~ 86 (313)
T 1qyd_A 78 DVVISALAG 86 (313)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCcc
Confidence 999998764
No 370
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=92.42 E-value=0.27 Score=50.74 Aligned_cols=77 Identities=17% Similarity=0.261 Sum_probs=58.3
Q ss_pred cccCCCEEEEEccc-hhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 107 AFNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 107 ~l~gikkIgIIG~G-smG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
.++| |++.|||-+ ..|..+|.-|... +..|.+.... ..++.+.+++||+||.+
T Consensus 176 ~l~G-k~vvViGRS~iVGkPla~LL~~~------~ATVTi~Hs~-------------------T~dl~~~~~~ADIvV~A 229 (303)
T 4b4u_A 176 EIAG-KHAVVVGRSAILGKPMAMMLLQA------NATVTICHSR-------------------TQNLPELVKQADIIVGA 229 (303)
T ss_dssp CCTT-CEEEEECCCTTTHHHHHHHHHHT------TCEEEEECTT-------------------CSSHHHHHHTCSEEEEC
T ss_pred CCCC-CEEEEEeccccccchHHHHHHhc------CCEEEEecCC-------------------CCCHHHHhhcCCeEEec
Confidence 5789 999999977 6799999999988 8777665331 23567889999999999
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEEEecCch
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~ 215 (582)
+.-... +. ...+|+|++|+++ |++
T Consensus 230 ~G~p~~---i~--~d~vk~GavVIDV-Gin 253 (303)
T 4b4u_A 230 VGKAEL---IQ--KDWIKQGAVVVDA-GFH 253 (303)
T ss_dssp SCSTTC---BC--GGGSCTTCEEEEC-CCB
T ss_pred cCCCCc---cc--cccccCCCEEEEe-cee
Confidence 874322 22 3568999999886 444
No 371
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=92.41 E-value=0.56 Score=43.48 Aligned_cols=70 Identities=20% Similarity=0.135 Sum_probs=45.9
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCH-HhhhccCCeEEEeccc
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLISD 188 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~-~Eav~~ADIVILaVPd 188 (582)
|||.|+|. |.+|.++++.|.+. |++|++..|+..+ .......++....+.+.+. .+++.+.|+||.+...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~-~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~ 72 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR------GHEVLAVVRDPQK-AADRLGATVATLVKEPLVLTEADLDSVDAVVDALSV 72 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCHHH-HHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC------CCEEEEEEecccc-cccccCCCceEEecccccccHhhcccCCEEEECCcc
Confidence 47999997 99999999999998 9998877775332 2222223443211111111 1678899999998754
No 372
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=92.36 E-value=0.34 Score=47.74 Aligned_cols=72 Identities=17% Similarity=0.142 Sum_probs=48.8
Q ss_pred CCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCC-c----ccHHH---HHHcCceecCCCcCC---HHhhhcc
Q 007987 111 INQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-S----RSFAE---ARAAGFTEENGTLGD---IYETISG 178 (582)
Q Consensus 111 ikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~-s----ks~~~---A~~~G~~~~d~t~~~---~~Eav~~ 178 (582)
+++|.|+|. |.+|.++++.|.+. |++|++..|+. + ...+. ....|+....+.+.+ +.+++++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~ 77 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSF------SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQ 77 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT------TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTT
T ss_pred ccEEEEEcCCchhHHHHHHHHHhC------CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcC
Confidence 378999995 99999999999998 88888777764 1 11111 123454321122333 4567889
Q ss_pred CCeEEEeccc
Q 007987 179 SDLVLLLISD 188 (582)
Q Consensus 179 ADIVILaVPd 188 (582)
+|+||.+...
T Consensus 78 ~d~vi~~a~~ 87 (321)
T 3c1o_A 78 VDIVISALPF 87 (321)
T ss_dssp CSEEEECCCG
T ss_pred CCEEEECCCc
Confidence 9999998864
No 373
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=92.32 E-value=0.33 Score=50.43 Aligned_cols=93 Identities=14% Similarity=0.134 Sum_probs=53.2
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecC--CcccHHHHH----HcCc-----ee--cC------CC----
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEAR----AAGF-----TE--EN------GT---- 168 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~--~sks~~~A~----~~G~-----~~--~d------~t---- 168 (582)
.||||+|+|.+|+-+++.|.+. .+++++...+. +........ ..|- .. ++ +.
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~-----p~vevvaI~d~~~~~~~~~~ll~yds~~g~~~~~~v~~~~~~~l~~~g~~i~v 78 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQS-----EDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTV 78 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTC-----SSEEEEEEECSSSCHHHHHHHHHCCTTTCCCCSSCEEESSSSEEEETTEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCC-----CCeEEEEEECCCCCHHHHHHhhcccccCCCCCCCcEEeecCCeeEECCeEEEE
Confidence 4899999999999999998764 15665444432 222111211 1121 00 00 00
Q ss_pred c--CCHHhh---hccCCeEEEeccchhHHHHHHHHHhcCCCCc--EEEEec
Q 007987 169 L--GDIYET---ISGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSH 212 (582)
Q Consensus 169 ~--~~~~Ea---v~~ADIVILaVPd~a~~~Vl~eI~~~Lk~Ga--iL~~a~ 212 (582)
. .+++++ -.++|+||.++|.....+..... ++.|+ +|+...
T Consensus 79 ~~~~dp~~l~w~~~~vDvV~eaTg~~~~~e~a~~~---l~aGak~VVIs~p 126 (337)
T 3e5r_O 79 FGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAH---LKGGAKKVVISAP 126 (337)
T ss_dssp ECCSCGGGCCHHHHTCSEEEECSSSCCSHHHHTHH---HHTTCSEEEESSC
T ss_pred EecCChHHccccccCCCEEEECCCchhhHHHHHHH---HHcCCCEEEEecC
Confidence 1 144443 14799999999998887666543 44565 555443
No 374
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=92.29 E-value=0.2 Score=52.45 Aligned_cols=91 Identities=12% Similarity=0.083 Sum_probs=56.3
Q ss_pred CCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecC--CcccHHHHHH---cCceecCCCcCCHHhhhccCCeEEE
Q 007987 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEARA---AGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 111 ikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~--~sks~~~A~~---~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
|.|||||| .|..|.-+.+-|.+. ..+++...... ..+.....-. .....+ ..+.++...++|+||+
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~h-----P~~el~~l~S~~~aG~~~~~~~p~~~~~l~~~---~~~~~~~~~~~Dvvf~ 84 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNH-----PEAKITYLSSRTYAGKKLEEIFPSTLENSILS---EFDPEKVSKNCDVLFT 84 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHC-----TTEEEEEEECSTTTTSBHHHHCGGGCCCCBCB---CCCHHHHHHHCSEEEE
T ss_pred eeEEEEECCCCHHHHHHHHHHHcC-----CCcEEEEEeCcccccCChHHhChhhccCceEE---eCCHHHhhcCCCEEEE
Confidence 47899998 699999999988875 13354332221 2233332100 112210 1245555578999999
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
|+|.....++.++ + .|..|++.++-
T Consensus 85 alp~~~s~~~~~~----~-~g~~VIDlSsd 109 (351)
T 1vkn_A 85 ALPAGASYDLVRE----L-KGVKIIDLGAD 109 (351)
T ss_dssp CCSTTHHHHHHTT----C-CSCEEEESSST
T ss_pred CCCcHHHHHHHHH----h-CCCEEEECChh
Confidence 9998877665554 3 68888888763
No 375
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=92.27 E-value=0.3 Score=51.06 Aligned_cols=69 Identities=13% Similarity=0.188 Sum_probs=50.5
Q ss_pred cccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHHH----HHHcC--ceecCCCcCCHHhh
Q 007987 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAG--FTEENGTLGDIYET 175 (582)
Q Consensus 107 ~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~~----A~~~G--~~~~d~t~~~~~Ea 175 (582)
.|+| .||+|||= +++..|++..+... |+++.+.-.++ ..-.+. |.+.| +.. ..+++|+
T Consensus 176 ~l~g-lkva~vGD~~nva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~----~~d~~ea 244 (340)
T 4ep1_A 176 TFKG-IKLAYVGDGNNVCHSLLLASAKV------GMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEI----LHNPELA 244 (340)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEE----ESCHHHH
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEE----ECCHHHH
Confidence 3788 99999995 58999999999887 98887765432 121222 34566 333 5689999
Q ss_pred hccCCeEEEec
Q 007987 176 ISGSDLVLLLI 186 (582)
Q Consensus 176 v~~ADIVILaV 186 (582)
+++||+|+..+
T Consensus 245 v~~aDVvyt~~ 255 (340)
T 4ep1_A 245 VNEADFIYTDV 255 (340)
T ss_dssp HTTCSEEEECC
T ss_pred hCCCCEEEecC
Confidence 99999999865
No 376
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=92.20 E-value=0.29 Score=50.16 Aligned_cols=92 Identities=12% Similarity=0.108 Sum_probs=59.4
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc-----cCCe
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~-----~ADI 181 (582)
.| ++|.|+|.|.+|...++-++.. |. +|++ ...+++..+.+++.|.... +....+..+.+. ..|+
T Consensus 190 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~~Vi~-~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~~~gg~D~ 261 (371)
T 1f8f_A 190 PA-SSFVTWGAGAVGLSALLAAKVC------GASIIIA-VDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNF 261 (371)
T ss_dssp TT-CEEEEESCSHHHHHHHHHHHHH------TCSEEEE-EESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCeEEE-ECCCHHHHHHHHHcCCCEEecCCccCHHHHHHHhcCCCCcE
Confidence 46 8999999999999999999888 87 4544 4444455778888886310 111123333332 4799
Q ss_pred EEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 182 VLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 182 VILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
||-++... ..++.....|+++-.++..
T Consensus 262 vid~~g~~---~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 262 ALESTGSP---EILKQGVDALGILGKIAVV 288 (371)
T ss_dssp EEECSCCH---HHHHHHHHTEEEEEEEEEC
T ss_pred EEECCCCH---HHHHHHHHHHhcCCEEEEe
Confidence 99998753 2355555667776555443
No 377
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.18 E-value=0.39 Score=51.54 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=65.7
Q ss_pred ccccCCCEEEEEccc----------hhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHH-HcC--ceecCCCcCCH
Q 007987 106 DAFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAG--FTEENGTLGDI 172 (582)
Q Consensus 106 ~~l~gikkIgIIG~G----------smG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~-~~G--~~~~d~t~~~~ 172 (582)
..++| ++|+|.|+- +-...++..|.+. |.+|.+++..-. +.++ ..| +.. +.+.
T Consensus 314 ~~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~---~~~~~~~~~~~~~----~~~~ 379 (450)
T 3gg2_A 314 GNVQG-RCVAIWGLSFKPGTDDMREAPSLVLIEKLLEV------GCRVRVYDPVAM---KEAQKRLGDKVEY----TTDM 379 (450)
T ss_dssp TCCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSCH---HHHHHHHGGGSEE----CSSH
T ss_pred ccCCC-CEEEEEeeeeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCCc---HHHHHhcCcccee----cCCH
Confidence 34688 999999984 4467788888887 999887665432 2222 234 443 4678
Q ss_pred HhhhccCCeEEEeccchhHHH-HHHHHHhcCCCCcEEEEecCc
Q 007987 173 YETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 173 ~Eav~~ADIVILaVPd~a~~~-Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
.++++++|.|+++|.-+...+ -++.+...|+ +.+|++.-++
T Consensus 380 ~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~-~~~i~D~r~~ 421 (450)
T 3gg2_A 380 YDAVRGAEALFHVTEWKEFRMPDWSALSQAMA-ASLVIDGRNV 421 (450)
T ss_dssp HHHTTTCSCEEECSCCGGGSSCCHHHHHHHSS-SCEEEESSCC
T ss_pred HHHhcCCCEEEEccCCHHHhhcCHHHHHHhcC-CCEEEECCCC
Confidence 899999999999999877754 2456766675 4577776654
No 378
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=92.16 E-value=0.5 Score=46.15 Aligned_cols=71 Identities=23% Similarity=0.303 Sum_probs=48.9
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCC-ceEEEEecCCcccH-HHHHHcCceecCCCcCC---HHhhhccCCeEEEe
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSF-AEARAAGFTEENGTLGD---IYETISGSDLVLLL 185 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G-~~ViVg~r~~sks~-~~A~~~G~~~~d~t~~~---~~Eav~~ADIVILa 185 (582)
|+|.|+|. |.+|.++++.|.+. | ++|++..|+..+.. +.....|+....+.+.+ +.++++++|+||.+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 79 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLED------GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIV 79 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH------CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhc------CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEe
Confidence 78999997 99999999999998 8 88887777644321 12223455321122333 44678889999998
Q ss_pred ccc
Q 007987 186 ISD 188 (582)
Q Consensus 186 VPd 188 (582)
...
T Consensus 80 a~~ 82 (299)
T 2wm3_A 80 TNY 82 (299)
T ss_dssp CCH
T ss_pred CCC
Confidence 753
No 379
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.13 E-value=0.49 Score=47.17 Aligned_cols=74 Identities=19% Similarity=0.126 Sum_probs=50.1
Q ss_pred cccCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHH---H-------cCceecCCCcCC---H
Q 007987 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR---A-------AGFTEENGTLGD---I 172 (582)
Q Consensus 107 ~l~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~---~-------~G~~~~d~t~~~---~ 172 (582)
.+++ |+|.|.| .|-+|.+++..|.+. |++|++..|.......... . .++....+.+.+ +
T Consensus 22 ~~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 94 (351)
T 3ruf_A 22 IFSP-KTWLITGVAGFIGSNLLEKLLKL------NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTC 94 (351)
T ss_dssp HHSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHH
T ss_pred CCCC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHH
Confidence 3567 9999999 599999999999998 9998877775443332221 1 233321122333 4
Q ss_pred HhhhccCCeEEEecc
Q 007987 173 YETISGSDLVLLLIS 187 (582)
Q Consensus 173 ~Eav~~ADIVILaVP 187 (582)
.+++++.|+||.+..
T Consensus 95 ~~~~~~~d~Vih~A~ 109 (351)
T 3ruf_A 95 EQVMKGVDHVLHQAA 109 (351)
T ss_dssp HHHTTTCSEEEECCC
T ss_pred HHHhcCCCEEEECCc
Confidence 467788999998875
No 380
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=92.06 E-value=0.34 Score=48.91 Aligned_cols=92 Identities=17% Similarity=0.190 Sum_probs=61.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc----cCCeEE
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS----GSDLVL 183 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~----~ADIVI 183 (582)
.| .+|.|+|.|.+|...++-++.. |.+|++..+ +++..+.+++.|.... |..-.+..+.+. ..|+||
T Consensus 166 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vi 237 (340)
T 3s2e_A 166 PG-QWVVISGIGGLGHVAVQYARAM------GLRVAAVDI-DDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVL 237 (340)
T ss_dssp TT-SEEEEECCSTTHHHHHHHHHHT------TCEEEEEES-CHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCeEEEEeC-CHHHHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEE
Confidence 56 8999999999999999999988 888765544 3455788888886320 111123333333 579999
Q ss_pred EeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 184 LLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 184 LaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
.++... +.++.....++++-.++..
T Consensus 238 d~~g~~---~~~~~~~~~l~~~G~iv~~ 262 (340)
T 3s2e_A 238 VTAVSP---KAFSQAIGMVRRGGTIALN 262 (340)
T ss_dssp ESSCCH---HHHHHHHHHEEEEEEEEEC
T ss_pred EeCCCH---HHHHHHHHHhccCCEEEEe
Confidence 987643 2455555667676655543
No 381
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=92.04 E-value=0.57 Score=46.07 Aligned_cols=75 Identities=21% Similarity=0.169 Sum_probs=48.2
Q ss_pred ccccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH------cCcee---cCCC-cCCHHh
Q 007987 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA------AGFTE---ENGT-LGDIYE 174 (582)
Q Consensus 106 ~~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~------~G~~~---~d~t-~~~~~E 174 (582)
..++| ++|.|.|. |-+|.++++.|.+. |++|++..|...+....... .++.. .|-+ ..++.+
T Consensus 7 ~~~~~-~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~ 79 (342)
T 1y1p_A 7 VLPEG-SLVLVTGANGFVASHVVEQLLEH------GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDE 79 (342)
T ss_dssp SSCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTT
T ss_pred cCCCC-CEEEEECCccHHHHHHHHHHHHC------CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHH
Confidence 45678 99999997 99999999999998 99887777653321111111 12221 1100 123456
Q ss_pred hhccCCeEEEecc
Q 007987 175 TISGSDLVLLLIS 187 (582)
Q Consensus 175 av~~ADIVILaVP 187 (582)
++++.|+||.+..
T Consensus 80 ~~~~~d~vih~A~ 92 (342)
T 1y1p_A 80 VIKGAAGVAHIAS 92 (342)
T ss_dssp TTTTCSEEEECCC
T ss_pred HHcCCCEEEEeCC
Confidence 6778999998764
No 382
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=92.02 E-value=0.19 Score=52.28 Aligned_cols=95 Identities=18% Similarity=0.228 Sum_probs=61.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceecCCCcCCH-Hhhhc------cCC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGDI-YETIS------GSD 180 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~-~Eav~------~AD 180 (582)
.| .+|.|+|.|.+|...++-++.. |. +|++..+ +.+..+.+++.|...-+-.-.+. .+.+. ..|
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~-~~~~~~~a~~lGa~~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 185 PG-SHVYIAGAGPVGRCAAAGARLL------GAACVIVGDQ-NPERLKLLSDAGFETIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEES-CHHHHHHHHTTTCEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEcC-CHHHHHHHHHcCCcEEcCCCcchHHHHHHHHhCCCCCC
Confidence 56 8999999999999999999888 88 6655444 34456788888874211111121 22222 479
Q ss_pred eEEEeccchh-----------HHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAA-----------QADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a-----------~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+||-++.... -...+++....++++-.++..
T Consensus 257 vvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 257 CGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred EEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 9999997542 112455656667776655433
No 383
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.99 E-value=0.17 Score=47.23 Aligned_cols=71 Identities=18% Similarity=0.258 Sum_probs=47.7
Q ss_pred CCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCC---HHhhhccCCeEEEec
Q 007987 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLI 186 (582)
Q Consensus 111 ikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~---~~Eav~~ADIVILaV 186 (582)
||+|.|+| .|.+|.++++.|.+. |++|++..|..++.... ..++......+.+ +.+++++.|+||.+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 75 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR------GFEVTAVVRHPEKIKIE--NEHLKVKKADVSSLDEVCEVCKGADAVISAF 75 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT------TCEEEEECSCGGGCCCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC------CCEEEEEEcCcccchhc--cCceEEEEecCCCHHHHHHHhcCCCEEEEeC
Confidence 58999999 599999999999998 99888777754332111 1233211112333 446788899999987
Q ss_pred cch
Q 007987 187 SDA 189 (582)
Q Consensus 187 Pd~ 189 (582)
.+.
T Consensus 76 ~~~ 78 (227)
T 3dhn_A 76 NPG 78 (227)
T ss_dssp CC-
T ss_pred cCC
Confidence 654
No 384
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=91.96 E-value=0.32 Score=51.24 Aligned_cols=70 Identities=16% Similarity=0.164 Sum_probs=52.1
Q ss_pred cccCCCEEEEEccc--hhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHH----HHHHcC--ceecCCCcCCHHh
Q 007987 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAG--FTEENGTLGDIYE 174 (582)
Q Consensus 107 ~l~gikkIgIIG~G--smG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~----~A~~~G--~~~~d~t~~~~~E 174 (582)
.|+| .||++||=| +++.|++..+... |+++.+.-... ..-.+ .|++.| +.. ..+++|
T Consensus 173 ~l~g-l~va~vGD~~~rva~Sl~~~~~~l------G~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~----~~d~~e 241 (359)
T 2w37_A 173 KLQG-LTLTFMGDGRNNVANSLLVTGAIL------GVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVI----TDDLDE 241 (359)
T ss_dssp CCTT-CEEEEESCTTSHHHHHHHHHHHHH------TCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEE----ESCHHH
T ss_pred CcCC-eEEEEECCCccchHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEE----EeCHHH
Confidence 4788 999999986 9999999999888 99887765431 11222 233667 443 578999
Q ss_pred hhccCCeEEEecc
Q 007987 175 TISGSDLVLLLIS 187 (582)
Q Consensus 175 av~~ADIVILaVP 187 (582)
++++||+|+..+=
T Consensus 242 av~~aDvvytd~w 254 (359)
T 2w37_A 242 GLKGSNVVYTDVW 254 (359)
T ss_dssp HHTTCSEEEECCS
T ss_pred HhcCCCEEEEccc
Confidence 9999999998554
No 385
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=91.84 E-value=0.46 Score=48.73 Aligned_cols=92 Identities=12% Similarity=0.020 Sum_probs=57.9
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc----Cc---eecCCCcCCHHhh-hcc
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----GF---TEENGTLGDIYET-ISG 178 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~----G~---~~~d~t~~~~~Ea-v~~ 178 (582)
.-.| ++|..||||..|.+...-.+.. |.+| ++.+.++...+.|++. |+ ... ..+..+. -..
T Consensus 120 l~~g-~rVLDIGcG~G~~ta~~lA~~~------ga~V-~gIDis~~~l~~Ar~~~~~~gl~~v~~v---~gDa~~l~d~~ 188 (298)
T 3fpf_A 120 FRRG-ERAVFIGGGPLPLTGILLSHVY------GMRV-NVVEIEPDIAELSRKVIEGLGVDGVNVI---TGDETVIDGLE 188 (298)
T ss_dssp CCTT-CEEEEECCCSSCHHHHHHHHTT------CCEE-EEEESSHHHHHHHHHHHHHHTCCSEEEE---ESCGGGGGGCC
T ss_pred CCCc-CEEEEECCCccHHHHHHHHHcc------CCEE-EEEECCHHHHHHHHHHHHhcCCCCeEEE---ECchhhCCCCC
Confidence 3456 8999999998765433222323 6665 5666666656666543 43 111 1233222 145
Q ss_pred CCeEEEeccchhHHHHHHHHHhcCCCCcEEE
Q 007987 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 179 ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
.|+|++..-.....++++++...|+||..|+
T Consensus 189 FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 189 FDVLMVAALAEPKRRVFRNIHRYVDTETRII 219 (298)
T ss_dssp CSEEEECTTCSCHHHHHHHHHHHCCTTCEEE
T ss_pred cCEEEECCCccCHHHHHHHHHHHcCCCcEEE
Confidence 7999987655555679999999999988765
No 386
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=91.83 E-value=0.31 Score=50.39 Aligned_cols=95 Identities=23% Similarity=0.242 Sum_probs=60.6
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceecCCCcCC-HHhhh------ccCC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEENGTLGD-IYETI------SGSD 180 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~d~t~~~-~~Eav------~~AD 180 (582)
.| .+|.|+|.|.+|...++-++.. |. .|+ +.+.+.+..+.+++.|...-+-.-.+ ..+.+ ...|
T Consensus 185 ~g-~~VlV~GaG~vG~~aiqlAk~~------Ga~~Vi-~~~~~~~~~~~a~~lGa~~i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 185 PG-STVYVAGAGPVGLAAAASARLL------GAAVVI-VGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEE-EEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CC-CEEEEECCcHHHHHHHHHHHHC------CCCeEE-EEcCCHHHHHHHHHcCCcEEccCCcchHHHHHHHHhCCCCCC
Confidence 56 8999999999999999999887 87 454 44444455788888887421111111 22222 1479
Q ss_pred eEEEeccchh------------HHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAA------------QADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a------------~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+||-++.... ....+++....++++-.++..
T Consensus 257 vvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 257 CAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp EEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 9999987542 112455555667776555443
No 387
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=91.80 E-value=0.34 Score=52.17 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=48.7
Q ss_pred cCCCEEEEEccchhHHH-HHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 109 NGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
..+++|.|||+|-.|.+ +|+-|++. |++|.+.+...+...+..++.|+....+. +. +.++.+|+||+.
T Consensus 17 ~~~~~v~viGiG~sG~s~~A~~l~~~------G~~V~~~D~~~~~~~~~l~~~gi~~~~g~--~~-~~~~~a~~vv~s 85 (491)
T 2f00_A 17 RRVRHIHFVGIGGAGMGGIAEVLANE------GYQISGSDLAPNPVTQQLMNLGATIYFNH--RP-ENVRDASVVVVS 85 (491)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHT------TCEEEEECSSCCHHHHHHHHTTCEEESSC--CG-GGGTTCSEEEEC
T ss_pred ccCCEEEEEEcCHHHHHHHHHHHHhC------CCeEEEECCCCCHHHHHHHHCCCEEECCC--CH-HHcCCCCEEEEC
Confidence 44589999999999997 99999998 99987766654443345556787653221 22 346789999884
No 388
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=91.78 E-value=0.71 Score=46.88 Aligned_cols=92 Identities=15% Similarity=0.103 Sum_probs=59.5
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCc-CC-HH---hhh-----c
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GD-IY---ETI-----S 177 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~-~~-~~---Eav-----~ 177 (582)
.| ++|.|+|.|.+|...++-++.. |.+|++. ..+.+..+.+++.|.... +..- .+ .+ +.. .
T Consensus 168 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~Vi~~-~~~~~~~~~~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~g~ 239 (352)
T 1e3j_A 168 LG-TTVLVIGAGPIGLVSVLAAKAY------GAFVVCT-ARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGD 239 (352)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEE-ESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEE-cCCHHHHHHHHHhCCCEEEcCcccccHHHHHHHHhccccCC
Confidence 57 8999999999999999999888 8886544 444455677888886310 1110 11 11 222 2
Q ss_pred cCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 178 ~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
..|+||-++.... .++.....++++-.++..
T Consensus 240 g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~ 270 (352)
T 1e3j_A 240 LPNVTIDCSGNEK---CITIGINITRTGGTLMLV 270 (352)
T ss_dssp CCSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCCEEEECCCCHH---HHHHHHHHHhcCCEEEEE
Confidence 5899999997642 344555567776655443
No 389
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=91.69 E-value=0.7 Score=48.20 Aligned_cols=80 Identities=13% Similarity=0.120 Sum_probs=42.6
Q ss_pred cccccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCC--ceEEEEecCCccc--HHHHH--HcC-ce--ecCCCcCCHHh
Q 007987 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSD--IVVKVGLRKGSRS--FAEAR--AAG-FT--EENGTLGDIYE 174 (582)
Q Consensus 105 ~~~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G--~~ViVg~r~~sks--~~~A~--~~G-~~--~~d~t~~~~~E 174 (582)
+..+.. -||+|||. |.+|.+++..|... +=.|.+ .++...+...... .-.+. .+. +. ..-....+..+
T Consensus 19 ~~s~~~-vKVaViGAaG~IG~~la~~la~~-~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~~~~~ 96 (345)
T 4h7p_A 19 PGSMSA-VKVAVTGAAGQIGYALVPLIARG-ALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTADPRV 96 (345)
T ss_dssp ---CCC-EEEEEESTTSHHHHHHHHHHHHT-TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEESCHHH
T ss_pred CCCCCC-CEEEEECcCcHHHHHHHHHHHhc-cccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcCChHH
Confidence 345555 69999996 99999999988875 000111 1444444322111 11111 111 10 00001346778
Q ss_pred hhccCCeEEEec
Q 007987 175 TISGSDLVLLLI 186 (582)
Q Consensus 175 av~~ADIVILaV 186 (582)
++++||+||++-
T Consensus 97 a~~~advVvi~a 108 (345)
T 4h7p_A 97 AFDGVAIAIMCG 108 (345)
T ss_dssp HTTTCSEEEECC
T ss_pred HhCCCCEEEECC
Confidence 899999999964
No 390
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.68 E-value=0.2 Score=51.30 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=59.4
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc------cCCe
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSDL 181 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~------~ADI 181 (582)
.| ++|.|+|.|.+|.+.++-++.. |.+|++..++ .+..+.+++.|.... |....+..+.+. ..|+
T Consensus 189 ~g-~~VlV~G~G~vG~~a~qla~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~ 260 (363)
T 3uog_A 189 AG-DRVVVQGTGGVALFGLQIAKAT------GAEVIVTSSS-REKLDRAFALGADHGINRLEEDWVERVYALTGDRGADH 260 (363)
T ss_dssp TT-CEEEEESSBHHHHHHHHHHHHT------TCEEEEEESC-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEecC-chhHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceE
Confidence 46 8999999999999999999988 9887665544 445677888886420 111123333221 5799
Q ss_pred EEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 182 VLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 182 VILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
||-++..... +.....++++-.++..
T Consensus 261 vid~~g~~~~----~~~~~~l~~~G~iv~~ 286 (363)
T 3uog_A 261 ILEIAGGAGL----GQSLKAVAPDGRISVI 286 (363)
T ss_dssp EEEETTSSCH----HHHHHHEEEEEEEEEE
T ss_pred EEECCChHHH----HHHHHHhhcCCEEEEE
Confidence 9999985543 3344456665555444
No 391
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.66 E-value=0.38 Score=44.46 Aligned_cols=92 Identities=13% Similarity=0.087 Sum_probs=58.5
Q ss_pred cCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhh------ccCC
Q 007987 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (582)
Q Consensus 109 ~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav------~~AD 180 (582)
.| ++|.|+| .|.+|.++++.++.. |.+|++..++ ....+.+++.|.... |-.-.+..+.+ ...|
T Consensus 38 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 38 PG-ERVLIHSATGGVGMAAVSIAKMI------GARIYTTAGS-DAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TT-CEEEETTTTSHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEeeCCChHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCe
Confidence 56 8999999 699999999999988 8887665554 333456666665210 11111222222 1479
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+||.++.. +.++...+.|+++-.++...
T Consensus 110 ~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 110 VVLNSLAG----EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEECCCT----HHHHHHHHTEEEEEEEEECS
T ss_pred EEEECCch----HHHHHHHHHhccCCEEEEEc
Confidence 99988864 34556666777766555444
No 392
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.66 E-value=0.7 Score=47.17 Aligned_cols=44 Identities=16% Similarity=0.085 Sum_probs=30.4
Q ss_pred ccccccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEec
Q 007987 98 RDLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (582)
Q Consensus 98 r~~f~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r 148 (582)
+|.+....+.|++ .+|.|||+|-.|..++++|..+ |+ ++.+.++
T Consensus 24 ~~G~~~~q~kL~~-~~VlVvGaGGlGs~va~~La~a------GVG~i~lvD~ 68 (292)
T 3h8v_A 24 RMGIVSDYEKIRT-FAVAIVGVGGVGSVTAEMLTRC------GIGKLLLFDY 68 (292)
T ss_dssp --------CGGGG-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECC
T ss_pred ccChHHHHHHHhC-CeEEEECcCHHHHHHHHHHHHc------CCCEEEEECC
Confidence 3555224577888 9999999999999999999998 76 5555543
No 393
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.62 E-value=0.62 Score=47.45 Aligned_cols=92 Identities=14% Similarity=0.108 Sum_probs=59.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCC---cCCHHhhh-----cc
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGT---LGDIYETI-----SG 178 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t---~~~~~Eav-----~~ 178 (582)
.| .+|.|+|.|.+|...++-++.. |. +|++..+ ++...+.+++.|.... +.. ..+..+.+ ..
T Consensus 171 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~-~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g 242 (356)
T 1pl8_A 171 LG-HKVLVCGAGPIGMVTLLVAKAM------GAAQVVVTDL-SATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCK 242 (356)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCSEEEEEES-CHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEECC-CHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCC
Confidence 57 8999999999999999999887 88 6655444 4455678888886310 100 00111122 35
Q ss_pred CCeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 179 ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
.|+||-++.... .++.....|+++-.++..
T Consensus 243 ~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 243 PEVTIECTGAEA---SIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp CSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCEEEECCCChH---HHHHHHHHhcCCCEEEEE
Confidence 899999997542 344555567776655443
No 394
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=91.58 E-value=0.25 Score=50.99 Aligned_cols=72 Identities=18% Similarity=0.199 Sum_probs=53.3
Q ss_pred cccCCCEEEEEcc---chhHHHHHHHHHHhhhhhcCCceEEEEecC----CcccHHHHHHcCceecCCCcCCHHhhhccC
Q 007987 107 AFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAAGFTEENGTLGDIYETISGS 179 (582)
Q Consensus 107 ~l~gikkIgIIG~---GsmG~AiA~nLrds~~~~g~G~~ViVg~r~----~sks~~~A~~~G~~~~d~t~~~~~Eav~~A 179 (582)
.|+| .||++||= |++..|++..+... |+++.+.-.. +..-.+.+++.|.... ...+++|++++|
T Consensus 152 ~l~g-l~va~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~a 222 (308)
T 1ml4_A 152 RIDG-LKIGLLGDLKYGRTVHSLAEALTFY------DVELYLISPELLRMPRHIVEELREKGMKVV--ETTTLEDVIGKL 222 (308)
T ss_dssp CSSS-EEEEEESCTTTCHHHHHHHHHGGGS------CEEEEEECCGGGCCCHHHHHHHHHTTCCEE--EESCTHHHHTTC
T ss_pred CCCC-eEEEEeCCCCcCchHHHHHHHHHHC------CCEEEEECCccccCCHHHHHHHHHcCCeEE--EEcCHHHHhcCC
Confidence 4788 89999997 48999999998887 9988776543 1223455666675310 146899999999
Q ss_pred CeEEEecc
Q 007987 180 DLVLLLIS 187 (582)
Q Consensus 180 DIVILaVP 187 (582)
|+|...+=
T Consensus 223 Dvvyt~~~ 230 (308)
T 1ml4_A 223 DVLYVTRI 230 (308)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99998663
No 395
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=91.47 E-value=0.46 Score=48.75 Aligned_cols=71 Identities=21% Similarity=0.147 Sum_probs=42.0
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH--cC-c--eecCCCc-CCHHhhhccCCeEEE
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA--AG-F--TEENGTL-GDIYETISGSDLVLL 184 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~--~G-~--~~~d~t~-~~~~Eav~~ADIVIL 184 (582)
+||+||| .|.+|.+++..|... .+...++++.+... +....+.+ .. . .. .+.. .+..+++++||+||+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~---~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v-~~~~~~~~~~~~~~aDivii 75 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQ---LPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKI-KGFSGEDATPALEGADVVLI 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH---SCTTEEEEEECSST-THHHHHHHHHTSCSSEEE-EEECSSCCHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC---CCCCceEEEEecCC-CchhHHHHhhCCCCCceE-EEecCCCcHHHhCCCCEEEE
Confidence 5899999 899999999998753 01123555544433 22222221 11 1 11 0000 245678999999999
Q ss_pred ecc
Q 007987 185 LIS 187 (582)
Q Consensus 185 aVP 187 (582)
+..
T Consensus 76 ~ag 78 (312)
T 3hhp_A 76 SAG 78 (312)
T ss_dssp CCS
T ss_pred eCC
Confidence 873
No 396
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.29 E-value=0.26 Score=47.94 Aligned_cols=66 Identities=15% Similarity=0.174 Sum_probs=45.1
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCC---HHhhhcc-CCeEEEecc
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISG-SDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~---~~Eav~~-ADIVILaVP 187 (582)
|+|.|+|.|.+|..++..|.+. |++|++..|..++. ..++....+.+.+ +.++++. .|+||.+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~------g~~V~~~~r~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~ 72 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQ------GHEVTGLRRSAQPM-----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVA 72 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT------TCCEEEEECTTSCC-----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred CcEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCcccc-----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence 7899999999999999999998 99888777764431 1232211111222 3345666 999998764
Q ss_pred c
Q 007987 188 D 188 (582)
Q Consensus 188 d 188 (582)
.
T Consensus 73 ~ 73 (286)
T 3gpi_A 73 A 73 (286)
T ss_dssp H
T ss_pred C
Confidence 3
No 397
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=91.24 E-value=0.23 Score=50.89 Aligned_cols=70 Identities=13% Similarity=-0.013 Sum_probs=52.1
Q ss_pred cccCCCEEEEEcc---chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 007987 107 AFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 107 ~l~gikkIgIIG~---GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
.|+| .||++||= +++..|++..+... |.++.+...+.-.... ..+.|+.. ..+++|+++++|+|+
T Consensus 143 ~l~g-l~va~vGDl~~~rva~Sl~~~~~~~------g~~v~~~~P~~~~p~~-~~~~g~~~----~~d~~eav~~aDvvy 210 (291)
T 3d6n_B 143 EVKD-LRVLYVGDIKHSRVFRSGAPLLNMF------GAKIGVCGPKTLIPRD-VEVFKVDV----FDDVDKGIDWADVVI 210 (291)
T ss_dssp CCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSCTT-GGGGCEEE----ESSHHHHHHHCSEEE
T ss_pred CcCC-cEEEEECCCCCCchHHHHHHHHHHC------CCEEEEECCchhCCch-HHHCCCEE----EcCHHHHhCCCCEEE
Confidence 4789 99999997 89999999999988 9988776543110001 12457654 578999999999999
Q ss_pred Eeccch
Q 007987 184 LLISDA 189 (582)
Q Consensus 184 LaVPd~ 189 (582)
. +-.+
T Consensus 211 ~-~~~q 215 (291)
T 3d6n_B 211 W-LRLQ 215 (291)
T ss_dssp E-CCCC
T ss_pred E-eCcc
Confidence 8 6543
No 398
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.14 E-value=0.47 Score=51.06 Aligned_cols=94 Identities=17% Similarity=0.263 Sum_probs=68.0
Q ss_pred ccccCCCEEEEEccc----------hhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-c-CceecCCCcCCHH
Q 007987 106 DAFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-A-GFTEENGTLGDIY 173 (582)
Q Consensus 106 ~~l~gikkIgIIG~G----------smG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-~-G~~~~d~t~~~~~ 173 (582)
..++| ++|+|.|+- +-...++..|.+. |.+|.+++..- .+.+++ . ++.. +.+.+
T Consensus 318 ~~~~~-~~v~vlGlafK~~~dD~ReSp~~~i~~~L~~~------g~~v~~~DP~~---~~~~~~~~~~~~~----~~~~~ 383 (446)
T 4a7p_A 318 GDVRG-KTVGILGLTFKPNTDDMRDAPSLSIIAALQDA------GATVKAYDPEG---VEQASKMLTDVEF----VENPY 383 (446)
T ss_dssp SCCTT-CEEEEECCSSSTTSCCCTTCSHHHHHHHHHHT------SCEEEEECSSC---HHHHGGGCSSCCB----CSCHH
T ss_pred ccCCC-CEEEEEEEEeCCCCcccccChHHHHHHHHHHC------CCEEEEECCCC---CHhHHHhcCCceE----ecChh
Confidence 34688 999999997 7788999999988 99988766542 233322 2 4442 46788
Q ss_pred hhhccCCeEEEeccchhHHH-HHHHHHhcCCCCcEEEEecCc
Q 007987 174 ETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 174 Eav~~ADIVILaVPd~a~~~-Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
++++++|+|+++|.-+...+ -++.+...|+. .+|++.-++
T Consensus 384 ~~~~~ad~vvi~t~~~~f~~~d~~~~~~~~~~-~~i~D~r~~ 424 (446)
T 4a7p_A 384 AAADGADALVIVTEWDAFRALDLTRIKNSLKS-PVLVDLRNI 424 (446)
T ss_dssp HHHTTBSEEEECSCCTTTTSCCHHHHHTTBSS-CBEECSSCC
T ss_pred HHhcCCCEEEEeeCCHHhhcCCHHHHHHhcCC-CEEEECCCC
Confidence 99999999999999777654 34567777754 567776654
No 399
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=91.12 E-value=0.47 Score=50.09 Aligned_cols=70 Identities=11% Similarity=0.004 Sum_probs=49.6
Q ss_pred cccCCCEEEEEccc--hhHHHHHHHHHHhhhhhcCCceEEEEecCC------cccH----HHHHHcCceecCCCcCCHHh
Q 007987 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG------SRSF----AEARAAGFTEENGTLGDIYE 174 (582)
Q Consensus 107 ~l~gikkIgIIG~G--smG~AiA~nLrds~~~~g~G~~ViVg~r~~------sks~----~~A~~~G~~~~d~t~~~~~E 174 (582)
.|+| .||++||=| +++.|++..+... |+++.+.-.+. +.-. +.+.+.|.... ...+++|
T Consensus 177 ~l~g-lkva~vGD~~nnva~Sl~~~~~~l------G~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~--~~~d~~e 247 (365)
T 4amu_A 177 NLKN-KKIVFIGDYKNNVGVSTMIGAAFN------GMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLR--FSTDKIL 247 (365)
T ss_dssp SCTT-CEEEEESSTTSHHHHHHHHHHHHT------TCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEE--EESCHHH
T ss_pred CCCC-CEEEEECCCCcchHHHHHHHHHHc------CCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEE--EECCHHH
Confidence 3789 999999987 7899999988877 98887765431 1111 22445563210 1568999
Q ss_pred hhccCCeEEEe
Q 007987 175 TISGSDLVLLL 185 (582)
Q Consensus 175 av~~ADIVILa 185 (582)
++++||+|..-
T Consensus 248 av~~aDVVytd 258 (365)
T 4amu_A 248 AAQDADVIYTD 258 (365)
T ss_dssp HTTTCSEEEEC
T ss_pred HhcCCCEEEec
Confidence 99999999984
No 400
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=91.09 E-value=0.48 Score=48.11 Aligned_cols=90 Identities=18% Similarity=0.138 Sum_probs=60.3
Q ss_pred cCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhh------ccCCe
Q 007987 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI------SGSDL 181 (582)
Q Consensus 109 ~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav------~~ADI 181 (582)
.| ++|.|+| .|.+|.+.++.++.. |.+|++. ++ ....+.+++.|...-+ ...+..+.+ ...|+
T Consensus 150 ~g-~~VlV~Ga~g~iG~~~~q~a~~~------Ga~Vi~~-~~-~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~ 219 (343)
T 3gaz_A 150 DG-QTVLIQGGGGGVGHVAIQIALAR------GARVFAT-AR-GSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDL 219 (343)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEE-EC-HHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEE
T ss_pred CC-CEEEEecCCCHHHHHHHHHHHHC------CCEEEEE-eC-HHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceE
Confidence 56 8999999 799999999999988 8887655 43 3457778888875312 122333332 25799
Q ss_pred EEEeccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 182 VILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
||-++... .+......|+++-.++...
T Consensus 220 vid~~g~~----~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 220 VYDTLGGP----VLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp EEESSCTH----HHHHHHHHEEEEEEEEESC
T ss_pred EEECCCcH----HHHHHHHHHhcCCeEEEEc
Confidence 99998853 4444455666655555443
No 401
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=91.03 E-value=0.33 Score=53.02 Aligned_cols=92 Identities=14% Similarity=0.156 Sum_probs=57.5
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCc---eEEEEecCCcccHHHHHHcCceecCCCc--CCH----HhhhccCCeE
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTL--GDI----YETISGSDLV 182 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~---~ViVg~r~~sks~~~A~~~G~~~~d~t~--~~~----~Eav~~ADIV 182 (582)
++|.|||+|.||.+++..|.++ .++ +|++.+..... .+.....|+....-.+ .+. ..++++.|+|
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~-----~dv~~~~I~vaD~~~~~-~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvV 87 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEK-----FDIKPSQVTIIAAEGTK-VDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFL 87 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHH-----BCCCGGGEEEEESSCCS-CCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEE
T ss_pred CCEEEECcCHHHHHHHHHHHhC-----CCCceeEEEEeccchhh-hhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEE
Confidence 5799999999999999998876 134 56666654332 2333444643211111 222 3456667999
Q ss_pred EEeccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 183 ILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
|.+.++.....+++... ..|.-.++.+
T Consensus 88 IN~s~~~~~l~Im~acl---eaGv~YlDTa 114 (480)
T 2ph5_A 88 IDVSIGISSLALIILCN---QKGALYINAA 114 (480)
T ss_dssp EECCSSSCHHHHHHHHH---HHTCEEEESS
T ss_pred EECCccccCHHHHHHHH---HcCCCEEECC
Confidence 99999887767776432 3465555555
No 402
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.97 E-value=0.89 Score=48.76 Aligned_cols=83 Identities=13% Similarity=0.057 Sum_probs=54.8
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-cCceecCCCcCCHHhhhccCCeEEE
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
-.++| ++|.|||.|..|.+-++.|.+. |.+|+|.........+...+ .++....+. .+. +-+.++|+||.
T Consensus 8 ~~l~~-~~vlVvGgG~va~~k~~~L~~~------ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~-~~~-~~l~~~~lVi~ 78 (457)
T 1pjq_A 8 CQLRD-RDCLIVGGGDVAERKARLLLEA------GARLTVNALTFIPQFTVWANEGMLTLVEGP-FDE-TLLDSCWLAIA 78 (457)
T ss_dssp ECCBT-CEEEEECCSHHHHHHHHHHHHT------TBEEEEEESSCCHHHHHHHTTTSCEEEESS-CCG-GGGTTCSEEEE
T ss_pred EECCC-CEEEEECCCHHHHHHHHHHHhC------cCEEEEEcCCCCHHHHHHHhcCCEEEEECC-CCc-cccCCccEEEE
Confidence 45789 9999999999999999999999 98887776543332222222 344321111 122 34578999999
Q ss_pred eccchhH-HHHHHH
Q 007987 185 LISDAAQ-ADNYEK 197 (582)
Q Consensus 185 aVPd~a~-~~Vl~e 197 (582)
++.+... ..++..
T Consensus 79 at~~~~~n~~i~~~ 92 (457)
T 1pjq_A 79 ATDDDTVNQRVSDA 92 (457)
T ss_dssp CCSCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHH
Confidence 8887754 344443
No 403
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=90.94 E-value=0.42 Score=49.21 Aligned_cols=65 Identities=20% Similarity=0.189 Sum_probs=47.4
Q ss_pred cccCCCEEEEEccc---hhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 007987 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 107 ~l~gikkIgIIG~G---smG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
.|+| .||++||=| ++..|++..+... |+++.+...+.-.. + ....|. ..+++|++++||+|+
T Consensus 144 ~l~g-lkva~vGD~~~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~-~-~~~~g~------~~d~~eav~~aDvvy 208 (304)
T 3r7f_A 144 TFKG-LTVSIHGDIKHSRVARSNAEVLTRL------GARVLFSGPSEWQD-E-ENTFGT------YVSMDEAVESSDVVM 208 (304)
T ss_dssp CCTT-CEEEEESCCTTCHHHHHHHHHHHHT------TCEEEEESCGGGSC-T-TCSSCE------ECCHHHHHHHCSEEE
T ss_pred CCCC-CEEEEEcCCCCcchHHHHHHHHHHc------CCEEEEECCCccCc-c-hhhcCc------cCCHHHHhCCCCEEE
Confidence 4788 999999975 6999999999888 99887764432111 1 112332 468999999999998
Q ss_pred Eec
Q 007987 184 LLI 186 (582)
Q Consensus 184 LaV 186 (582)
...
T Consensus 209 t~~ 211 (304)
T 3r7f_A 209 LLR 211 (304)
T ss_dssp ECC
T ss_pred ecc
Confidence 864
No 404
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=90.90 E-value=0.39 Score=48.67 Aligned_cols=91 Identities=14% Similarity=0.191 Sum_probs=59.1
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhh----ccCCeEE
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI----SGSDLVL 183 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav----~~ADIVI 183 (582)
.| ++|.|+|.|.+|...++-++.. |.+|++..+ +....+.+++.|.... |-.-.+..+.+ ...|+||
T Consensus 164 ~g-~~VlV~GaG~vG~~~~~~a~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vi 235 (339)
T 1rjw_A 164 PG-EWVAIYGIGGLGHVAVQYAKAM------GLNVVAVDI-GDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAV 235 (339)
T ss_dssp TT-CEEEEECCSTTHHHHHHHHHHT------TCEEEEECS-CHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeC-CHHHHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEE
Confidence 56 8999999999999999999988 888765544 3455677788886320 11111222222 4589999
Q ss_pred EeccchhHHHHHHHHHhcCCCCcEEEE
Q 007987 184 LLISDAAQADNYEKIFSCMKPNSILGL 210 (582)
Q Consensus 184 LaVPd~a~~~Vl~eI~~~Lk~GaiL~~ 210 (582)
-++... ..++.....++++-.++.
T Consensus 236 d~~g~~---~~~~~~~~~l~~~G~~v~ 259 (339)
T 1rjw_A 236 VTAVSK---PAFQSAYNSIRRGGACVL 259 (339)
T ss_dssp ESSCCH---HHHHHHHHHEEEEEEEEE
T ss_pred ECCCCH---HHHHHHHHHhhcCCEEEE
Confidence 998752 234455556666555443
No 405
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=90.89 E-value=0.76 Score=45.94 Aligned_cols=73 Identities=16% Similarity=0.061 Sum_probs=48.8
Q ss_pred ccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHH----------HcCceecCCCcCC---HH
Q 007987 108 FNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR----------AAGFTEENGTLGD---IY 173 (582)
Q Consensus 108 l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~----------~~G~~~~d~t~~~---~~ 173 (582)
+++ ++|.|.|. |.+|.+++..|.+. |.+|++..|......+... ..++....+.+.+ +.
T Consensus 25 ~~~-~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 97 (352)
T 1sb8_A 25 AQP-KVWLITGVAGFIGSNLLETLLKL------DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCN 97 (352)
T ss_dssp HSC-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHH
T ss_pred ccC-CeEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHH
Confidence 567 89999997 99999999999998 9988777765432221111 1343211112333 44
Q ss_pred hhhccCCeEEEecc
Q 007987 174 ETISGSDLVLLLIS 187 (582)
Q Consensus 174 Eav~~ADIVILaVP 187 (582)
+++++.|+||.+..
T Consensus 98 ~~~~~~d~vih~A~ 111 (352)
T 1sb8_A 98 NACAGVDYVLHQAA 111 (352)
T ss_dssp HHHTTCSEEEECCS
T ss_pred HHhcCCCEEEECCc
Confidence 67788999999765
No 406
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=90.88 E-value=0.53 Score=48.95 Aligned_cols=70 Identities=14% Similarity=0.072 Sum_probs=49.5
Q ss_pred cccCCCEEEEEccc--hhHHHHHHHHHHhhhhhcCCceEEEEecCCcc------cHHHHH----H--cCceecCCCcCCH
Q 007987 107 AFNGINQIGVIGWG--SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR------SFAEAR----A--AGFTEENGTLGDI 172 (582)
Q Consensus 107 ~l~gikkIgIIG~G--smG~AiA~nLrds~~~~g~G~~ViVg~r~~sk------s~~~A~----~--~G~~~~d~t~~~~ 172 (582)
.|+| .||++||=| ++..|++..+... |+++.+.-.++-. ..+.++ + .|... ....++
T Consensus 158 ~l~g-l~va~vGD~~~~va~Sl~~~~~~~------G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v--~~~~d~ 228 (328)
T 3grf_A 158 GFKG-IKFAYCGDSMNNVTYDLMRGCALL------GMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSI--KIFHDC 228 (328)
T ss_dssp TGGG-CCEEEESCCSSHHHHHHHHHHHHH------TCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEE--EEESSH
T ss_pred ccCC-cEEEEeCCCCcchHHHHHHHHHHc------CCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeE--EEEcCH
Confidence 5889 999999975 8999999999887 9888776543211 222333 3 46321 015789
Q ss_pred HhhhccCCeEEEe
Q 007987 173 YETISGSDLVLLL 185 (582)
Q Consensus 173 ~Eav~~ADIVILa 185 (582)
+|+++++|+|..-
T Consensus 229 ~eav~~aDvvytd 241 (328)
T 3grf_A 229 KKGCEGVDVVYTD 241 (328)
T ss_dssp HHHHTTCSEEEEC
T ss_pred HHHhcCCCEEEec
Confidence 9999999999863
No 407
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.79 E-value=0.23 Score=49.34 Aligned_cols=90 Identities=21% Similarity=0.188 Sum_probs=59.0
Q ss_pred cCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCc-CCHHhhhccCCeEEEe
Q 007987 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTL-GDIYETISGSDLVLLL 185 (582)
Q Consensus 109 ~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~-~~~~Eav~~ADIVILa 185 (582)
.| ++|.|+|. |.+|.+.++-++.. |.+|++..++ .+..+.+++.|.... |..- .+..+.+...|+||-
T Consensus 125 ~g-~~vlV~Ga~G~vG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~d~vid- 195 (302)
T 1iz0_A 125 PG-EKVLVQAAAGALGTAAVQVARAM------GLRVLAAASR-PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLE- 195 (302)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESS-GGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEE-
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHhcCCCEEEECCcchhHHHHhcCceEEEE-
Confidence 57 89999998 99999999999988 8887665554 344567777886420 0000 112233357899999
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+... .++.....++++-.++..
T Consensus 196 ~g~~----~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 196 VRGK----EVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp CSCT----THHHHHTTEEEEEEEEEC
T ss_pred CCHH----HHHHHHHhhccCCEEEEE
Confidence 8763 455556667776555433
No 408
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=90.74 E-value=0.23 Score=54.09 Aligned_cols=48 Identities=27% Similarity=0.344 Sum_probs=33.1
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcC
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG 161 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G 161 (582)
.++| +++.|+|.|-+|.+++..|.+. |.+|++.+|+.++..+.+.+.+
T Consensus 361 ~l~~-k~vlV~GaGGig~aia~~L~~~------G~~V~i~~R~~~~a~~la~~~~ 408 (523)
T 2o7s_A 361 PLAS-KTVVVIGAGGAGKALAYGAKEK------GAKVVIANRTYERALELAEAIG 408 (523)
T ss_dssp ------CEEEECCSHHHHHHHHHHHHH------CC-CEEEESSHHHHHHHHHHTT
T ss_pred ccCC-CEEEEECCcHHHHHHHHHHHHC------CCEEEEEECCHHHHHHHHHHcC
Confidence 3577 8999999999999999999998 8888888876544444444433
No 409
>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*
Probab=90.68 E-value=0.39 Score=50.40 Aligned_cols=93 Identities=13% Similarity=0.083 Sum_probs=52.2
Q ss_pred CCEEEEEc-cchhHHHHHHHHHHhhhhhcCCc---eEEEEe-cCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI---VVKVGL-RKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 111 ikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~---~ViVg~-r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
|+||||+| .|.+|..+.+.|... +++ .+.... ++..+.........+... ...+.++ .+++|+||.|
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~-----~~~~~v~i~~~~~~s~G~~v~~~~g~~i~~~--~~~~~~~-~~~~DvVf~a 72 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEE-----RDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQ--DAFDLEA-LKALDIIVTC 72 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT-----TGGGGSEEEEEESSSTTSBCCGGGTCCCBCE--ETTCHHH-HHTCSEEEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhc-----CCCCeEEEEEEEeCCCCCCccccCCCceEEE--ecCChHH-hcCCCEEEEC
Confidence 57999999 999999999944432 032 332222 221111110000111110 0123333 5789999999
Q ss_pred ccchhHHHHHHHHHhcCCCCc--EEEEecCc
Q 007987 186 ISDAAQADNYEKIFSCMKPNS--ILGLSHGF 214 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~Ga--iL~~a~G~ 214 (582)
+|.....+..+.+.. .|. +|++.++.
T Consensus 73 ~g~~~s~~~a~~~~~---~G~k~vVID~ss~ 100 (367)
T 1t4b_A 73 QGGDYTNEIYPKLRE---SGWQGYWIDAASS 100 (367)
T ss_dssp SCHHHHHHHHHHHHH---TTCCCEEEECSST
T ss_pred CCchhHHHHHHHHHH---CCCCEEEEcCChh
Confidence 998877777766543 464 67776653
No 410
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=90.67 E-value=0.62 Score=48.75 Aligned_cols=89 Identities=13% Similarity=0.081 Sum_probs=54.9
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecC--CcccHHHH-------------HHcCceecCCCcCCHHhh
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEA-------------RAAGFTEENGTLGDIYET 175 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~--~sks~~~A-------------~~~G~~~~d~t~~~~~Ea 175 (582)
.+||||| .|..|.-+.+-|.+. ..+++.....+ ..+..... .+.-+. ..+. +.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-----P~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~-----~~~~-~~ 76 (359)
T 4dpl_A 8 LKAAILGATGLVGIEYVRMLSNH-----PYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK-----PTDP-KL 76 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-----SSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE-----ECCG-GG
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-----CCceEEEEECchhcCCChhHhcccccccccccccccceEE-----eCCH-HH
Confidence 5899999 699999999976554 12344332222 22333321 111111 1133 34
Q ss_pred hccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 176 v~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
+.++|+||+|+|.....++.+.+. +.|..+++.++-
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa~ 112 (359)
T 4dpl_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSPD 112 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSST
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCCC
Confidence 578999999999988877777654 468878777653
No 411
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=90.67 E-value=0.62 Score=48.75 Aligned_cols=89 Identities=13% Similarity=0.081 Sum_probs=54.9
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecC--CcccHHHH-------------HHcCceecCCCcCCHHhh
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK--GSRSFAEA-------------RAAGFTEENGTLGDIYET 175 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~--~sks~~~A-------------~~~G~~~~d~t~~~~~Ea 175 (582)
.+||||| .|..|.-+.+-|.+. ..+++.....+ ..+..... .+.-+. ..+. +.
T Consensus 8 ~kVaIvGATGyvG~eLlrlL~~h-----P~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~-----~~~~-~~ 76 (359)
T 4dpk_A 8 LKAAILGATGLVGIEYVRMLSNH-----PYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIK-----PTDP-KL 76 (359)
T ss_dssp EEEEETTTTSTTHHHHHHHHTTC-----SSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCE-----ECCG-GG
T ss_pred CeEEEECCCCHHHHHHHHHHHhC-----CCceEEEEECchhcCCChhHhcccccccccccccccceEE-----eCCH-HH
Confidence 5899999 699999999976554 12344332222 22333321 111111 1133 34
Q ss_pred hccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 176 ISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 176 v~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
+.++|+||+|+|.....++.+.+. +.|..+++.++-
T Consensus 77 ~~~vDvvf~a~p~~~s~~~a~~~~---~~G~~vIDlSa~ 112 (359)
T 4dpk_A 77 MDDVDIIFSPLPQGAAGPVEEQFA---KEGFPVISNSPD 112 (359)
T ss_dssp CTTCCEEEECCCTTTHHHHHHHHH---HTTCEEEECSST
T ss_pred hcCCCEEEECCChHHHHHHHHHHH---HCCCEEEEcCCC
Confidence 578999999999988877777654 468878777653
No 412
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=90.62 E-value=0.31 Score=49.81 Aligned_cols=91 Identities=20% Similarity=0.200 Sum_probs=59.2
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcC-CHHhhh-ccCCeEEEe
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLG-DIYETI-SGSDLVLLL 185 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~-~~~Eav-~~ADIVILa 185 (582)
.| .+|.|+|.|.+|...++-++.. |.+|++..++ .+..+.+++.|.... |..-. +..+.+ ...|+||-+
T Consensus 179 ~g-~~VlV~GaG~vG~~~~qlak~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~~D~vid~ 250 (360)
T 1piw_A 179 PG-KKVGIVGLGGIGSMGTLISKAM------GAETYVISRS-SRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVC 250 (360)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESS-STTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEcCC-HHHHHHHHHcCCCEEEcCcCchHHHHHhhcCCCEEEEC
Confidence 56 8999999999999999999988 8887655544 345778888886420 10001 222223 368999999
Q ss_pred ccc--hhHHHHHHHHHhcCCCCcEEEE
Q 007987 186 ISD--AAQADNYEKIFSCMKPNSILGL 210 (582)
Q Consensus 186 VPd--~a~~~Vl~eI~~~Lk~GaiL~~ 210 (582)
+.. .. .++.....|+++-.++.
T Consensus 251 ~g~~~~~---~~~~~~~~l~~~G~iv~ 274 (360)
T 1piw_A 251 ASSLTDI---DFNIMPKAMKVGGRIVS 274 (360)
T ss_dssp CSCSTTC---CTTTGGGGEEEEEEEEE
T ss_pred CCCCcHH---HHHHHHHHhcCCCEEEE
Confidence 875 21 23444556666655443
No 413
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=90.52 E-value=0.99 Score=45.72 Aligned_cols=92 Identities=17% Similarity=0.057 Sum_probs=60.5
Q ss_pred cCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCC-cCCHHhhhc-----cCC
Q 007987 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGT-LGDIYETIS-----GSD 180 (582)
Q Consensus 109 ~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t-~~~~~Eav~-----~AD 180 (582)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++.. ..+.+++.|.... |-. ..+..+.+. ..|
T Consensus 169 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------Ga~V~~~~~~~~-~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AG-HWVAISGAAGGLGSLAVQYAKAM------GYRVLGIDGGEG-KEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECSTT-HHHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CC-CEEEEECCCchHHHHHHHHHHHC------CCcEEEEcCCHH-HHHHHHHcCCceEEecCccHhHHHHHHHHhCCCCC
Confidence 56 89999999 89999999999988 888876665543 3567777775310 111 123333333 479
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+||.++... ..++...+.|+++-.|+..
T Consensus 241 ~vi~~~g~~---~~~~~~~~~l~~~G~iv~~ 268 (347)
T 2hcy_A 241 GVINVSVSE---AAIEASTRYVRANGTTVLV 268 (347)
T ss_dssp EEEECSSCH---HHHHHHTTSEEEEEEEEEC
T ss_pred EEEECCCcH---HHHHHHHHHHhcCCEEEEE
Confidence 999888742 3456666677775554433
No 414
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.44 E-value=0.66 Score=48.81 Aligned_cols=87 Identities=13% Similarity=0.120 Sum_probs=58.2
Q ss_pred cCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHH--------------
Q 007987 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIY-------------- 173 (582)
Q Consensus 109 ~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~-------------- 173 (582)
.| ++|.|+|. |.+|.+.++.++.. |.++++..++ ....+.+++.|... +.+..
T Consensus 220 ~g-~~VlV~GasG~iG~~a~qla~~~------Ga~vi~~~~~-~~~~~~~~~lGa~~----~i~~~~~~~~~~~~~~~~~ 287 (447)
T 4a0s_A 220 QG-DIVLIWGASGGLGSYAIQFVKNG------GGIPVAVVSS-AQKEAAVRALGCDL----VINRAELGITDDIADDPRR 287 (447)
T ss_dssp TT-CEEEETTTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCCC----EEEHHHHTCCTTGGGCHHH
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCCE----EEecccccccccccccccc
Confidence 46 89999998 99999999999988 9887766654 45567788888642 11110
Q ss_pred ---------h----hh-ccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 174 ---------E----TI-SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 174 ---------E----av-~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+ .. ...|+||-++... .++.....++++-.++..
T Consensus 288 ~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~----~~~~~~~~l~~~G~iv~~ 335 (447)
T 4a0s_A 288 VVETGRKLAKLVVEKAGREPDIVFEHTGRV----TFGLSVIVARRGGTVVTC 335 (447)
T ss_dssp HHHHHHHHHHHHHHHHSSCCSEEEECSCHH----HHHHHHHHSCTTCEEEES
T ss_pred cchhhhHHHHHHHHHhCCCceEEEECCCch----HHHHHHHHHhcCCEEEEE
Confidence 1 11 2478988888753 344555566676555443
No 415
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=90.38 E-value=1.1 Score=45.46 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=31.8
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecC
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~ 149 (582)
-.++| ++|.|||.|..|..-+..|.+. |.+|+|....
T Consensus 9 ~~l~~-k~VLVVGgG~va~rka~~Ll~~------Ga~VtViap~ 45 (274)
T 1kyq_A 9 HQLKD-KRILLIGGGEVGLTRLYKLMPT------GCKLTLVSPD 45 (274)
T ss_dssp ECCTT-CEEEEEEESHHHHHHHHHHGGG------TCEEEEEEEE
T ss_pred EEcCC-CEEEEECCcHHHHHHHHHHHhC------CCEEEEEcCC
Confidence 45689 9999999999999999999998 9887776543
No 416
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=90.33 E-value=1.2 Score=40.98 Aligned_cols=92 Identities=14% Similarity=0.067 Sum_probs=57.4
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH----cCc---eecCCCcCCHHh---hhcc
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGF---TEENGTLGDIYE---TISG 178 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~----~G~---~~~d~t~~~~~E---av~~ 178 (582)
.| .+|.-||+|. | .++..|.+. +.+.++ ++.+.++...+.|++ .|+ ... ..+..+ ....
T Consensus 40 ~~-~~vLDiG~G~-G-~~~~~la~~----~~~~~v-~~vD~s~~~~~~a~~~~~~~~~~~v~~~---~~d~~~~~~~~~~ 108 (204)
T 3e05_A 40 DD-LVMWDIGAGS-A-SVSIEASNL----MPNGRI-FALERNPQYLGFIRDNLKKFVARNVTLV---EAFAPEGLDDLPD 108 (204)
T ss_dssp TT-CEEEEETCTT-C-HHHHHHHHH----CTTSEE-EEEECCHHHHHHHHHHHHHHTCTTEEEE---ECCTTTTCTTSCC
T ss_pred CC-CEEEEECCCC-C-HHHHHHHHH----CCCCEE-EEEeCCHHHHHHHHHHHHHhCCCcEEEE---eCChhhhhhcCCC
Confidence 56 8999999997 3 344455544 112455 566665555555554 232 211 122222 2256
Q ss_pred CCeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 179 SDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 179 ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
.|+|++..+......+++++...|+||-.+++.
T Consensus 109 ~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 141 (204)
T 3e05_A 109 PDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLN 141 (204)
T ss_dssp CSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEE
Confidence 899999877777778999999999998876544
No 417
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.28 E-value=0.31 Score=49.52 Aligned_cols=92 Identities=25% Similarity=0.290 Sum_probs=59.4
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc------cCC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~------~AD 180 (582)
.| .+|.|+|.|.+|...++-++.. |. +|++ ...+.+..+.+++.|.... +..-.+..+.+. ..|
T Consensus 166 ~g-~~VlV~GaG~vG~~a~qla~~~------Ga~~Vi~-~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D 237 (352)
T 3fpc_A 166 LG-DTVCVIGIGPVGLMSVAGANHL------GAGRIFA-VGSRKHCCDIALEYGATDIINYKNGDIVEQILKATDGKGVD 237 (352)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHTT------TCSSEEE-ECCCHHHHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCcEEEE-ECCCHHHHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCC
Confidence 56 8999999999999999999888 87 5655 4444555788888887420 111122222221 479
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+||-++.... .++.....|+++-.++..
T Consensus 238 ~v~d~~g~~~---~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 238 KVVIAGGDVH---TFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EEEECSSCTT---HHHHHHHHEEEEEEEEEC
T ss_pred EEEECCCChH---HHHHHHHHHhcCCEEEEe
Confidence 9999988632 344444556666555433
No 418
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=90.22 E-value=0.39 Score=48.75 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=59.5
Q ss_pred cCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc------cCC
Q 007987 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS------GSD 180 (582)
Q Consensus 109 ~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~------~AD 180 (582)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ .+..+.+++.|.... +.. .+..+.+. ..|
T Consensus 159 ~g-~~VlV~Gasg~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 159 AG-ETVLVLGAAGGIGTAAIQIAKGM------GAKVIAVVNR-TAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVD 229 (342)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-GGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCce
Confidence 56 89999998 99999999999988 9887665554 445678888886421 111 23333222 489
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+||-++... .++.....++++-.++..
T Consensus 230 vvid~~g~~----~~~~~~~~l~~~G~iv~~ 256 (342)
T 4eye_A 230 MVVDPIGGP----AFDDAVRTLASEGRLLVV 256 (342)
T ss_dssp EEEESCC------CHHHHHHTEEEEEEEEEC
T ss_pred EEEECCchh----HHHHHHHhhcCCCEEEEE
Confidence 999998864 344555567666555443
No 419
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=90.18 E-value=0.57 Score=47.55 Aligned_cols=93 Identities=14% Similarity=0.186 Sum_probs=59.9
Q ss_pred cCCCEEEEE-ccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc-----cCCeE
Q 007987 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS-----GSDLV 182 (582)
Q Consensus 109 ~gikkIgII-G~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~-----~ADIV 182 (582)
.| ++|.|+ |.|.+|.+.++-++.. |.+|++..+ +.+..+.+++.|....-..-.+..+.++ ..|+|
T Consensus 150 ~g-~~VlV~gg~G~vG~~a~qla~~~------Ga~Vi~~~~-~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EG-KTLLIINGAGGVGSIATQIAKAY------GLRVITTAS-RNETIEWTKKMGADIVLNHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TT-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEECC-SHHHHHHHHHHTCSEEECTTSCHHHHHHHHTCCCEEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeC-CHHHHHHHHhcCCcEEEECCccHHHHHHHhCCCCccEE
Confidence 68 899999 7999999999999988 888765544 3455778888886421000112333332 47999
Q ss_pred EEeccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 183 LLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 183 ILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
|-++.... .++.....|+++-.++...
T Consensus 222 ~d~~g~~~---~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 222 FCTFNTDM---YYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp EESSCHHH---HHHHHHHHEEEEEEEEESS
T ss_pred EECCCchH---HHHHHHHHhccCCEEEEEC
Confidence 99887532 3444455666655554433
No 420
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=90.18 E-value=0.84 Score=46.90 Aligned_cols=70 Identities=14% Similarity=0.046 Sum_probs=50.9
Q ss_pred cccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcc-cHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR-SFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 107 ~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sk-s~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
.|+| .||++||= +++.+|++..+... |.++.+.-.+.-. ..+.-...++.. ..+++|+++++|+|..
T Consensus 151 ~l~g-l~ia~vGD~~rva~Sl~~~~~~~------g~~v~~~~P~~~~~~~~~~~~~~~~~----~~d~~eav~~aDvvy~ 219 (301)
T 2ef0_A 151 GLAG-LEVAWVGDGNNVLNSLLEVAPLA------GLKVRVATPKGYEPDPGLLKRANAFF----THDPKEAALGAHALYT 219 (301)
T ss_dssp CCTT-CEEEEESCCCHHHHHHHHHHHHH------TCEEEEECCTTCCCCHHHHHHHTCEE----ESCHHHHHTTCSEEEE
T ss_pred CcCC-cEEEEECCCchhHHHHHHHHHHc------CCEEEEECCchhcCCHHHHhhceeEE----ECCHHHHhcCCCEEEe
Confidence 4788 99999996 79999999999888 9988776554211 111112223554 5789999999999998
Q ss_pred ecc
Q 007987 185 LIS 187 (582)
Q Consensus 185 aVP 187 (582)
.+=
T Consensus 220 ~~~ 222 (301)
T 2ef0_A 220 DVW 222 (301)
T ss_dssp CCC
T ss_pred cCc
Confidence 554
No 421
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.16 E-value=0.96 Score=48.42 Aligned_cols=96 Identities=18% Similarity=0.138 Sum_probs=66.1
Q ss_pred cccCCCEEEEEccc----------hhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc-------------Cce
Q 007987 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-------------GFT 163 (582)
Q Consensus 107 ~l~gikkIgIIG~G----------smG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~-------------G~~ 163 (582)
.++| ++|+|.|+- +-...++..|.+. |.+|.+++..-.. .+..... ++.
T Consensus 326 ~~~~-~~v~vlGlafK~~~dD~R~sp~~~i~~~L~~~------g~~v~~~DP~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 397 (467)
T 2q3e_A 326 TVTD-KKIAILGFAFKKDTGDTRESSSIYISKYLMDE------GAHLHIYDPKVPR-EQIVVDLSHPGVSEDDQVSRLVT 397 (467)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCH-HHHHHHHCC------CHHHHHEE
T ss_pred ccCC-CEEEEEeeccCCCCcchhhChHHHHHHHHHHC------CCEEEEEcCccCH-HHHhhhhccccccccccccCcee
Confidence 3688 999999986 3677888888887 9888776654221 1110111 233
Q ss_pred ecCCCcCCHHhhhccCCeEEEeccchhHHHH-HHHHHhcCCCCcEEEEecCc
Q 007987 164 EENGTLGDIYETISGSDLVLLLISDAAQADN-YEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 164 ~~d~t~~~~~Eav~~ADIVILaVPd~a~~~V-l~eI~~~Lk~GaiL~~a~G~ 214 (582)
. +.+..++++++|+|+++|.-.....+ ++++...|+...+|.+.-++
T Consensus 398 ~----~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~ 445 (467)
T 2q3e_A 398 I----SKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRV 445 (467)
T ss_dssp E----CSSHHHHHTTCSEEEECSCCGGGGGSCHHHHHHHSCSSCEEEESSCT
T ss_pred e----cCCHHHHHhCCcEEEEecCChhhhcCCHHHHHHhcCCCCEEEeCCCc
Confidence 2 34778899999999999998877653 55677777765557776654
No 422
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=90.11 E-value=1.4 Score=43.68 Aligned_cols=90 Identities=17% Similarity=0.245 Sum_probs=56.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc----C----ceecCCCcCCHHhhhccCC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA----G----FTEENGTLGDIYETISGSD 180 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~----G----~~~~d~t~~~~~Eav~~AD 180 (582)
.| .+|.-||||. |. ++..|.+.. |.+| ++.+.++...+.|++. | +... ..+..+.-...|
T Consensus 90 ~~-~~vLDiGcG~-G~-~~~~la~~~-----~~~v-~gvD~s~~~~~~a~~~~~~~~~~~~v~~~---~~d~~~~~~~fD 157 (318)
T 2fk8_A 90 PG-MTLLDIGCGW-GT-TMRRAVERF-----DVNV-IGLTLSKNQHARCEQVLASIDTNRSRQVL---LQGWEDFAEPVD 157 (318)
T ss_dssp TT-CEEEEESCTT-SH-HHHHHHHHH-----CCEE-EEEESCHHHHHHHHHHHHTSCCSSCEEEE---ESCGGGCCCCCS
T ss_pred Cc-CEEEEEcccc-hH-HHHHHHHHC-----CCEE-EEEECCHHHHHHHHHHHHhcCCCCceEEE---ECChHHCCCCcC
Confidence 56 8999999998 33 333333321 5555 5666655555555543 3 2210 234444335689
Q ss_pred eEEEe-----ccchhHHHHHHHHHhcCCCCcEEEE
Q 007987 181 LVLLL-----ISDAAQADNYEKIFSCMKPNSILGL 210 (582)
Q Consensus 181 IVILa-----VPd~a~~~Vl~eI~~~Lk~GaiL~~ 210 (582)
+|+.. +++.....+++++...|+||-.+++
T Consensus 158 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 158 RIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp EEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 99987 6666778899999999999886653
No 423
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.09 E-value=0.45 Score=49.06 Aligned_cols=90 Identities=19% Similarity=0.257 Sum_probs=58.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCC---HHhhhccCCeEEE
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGD---IYETISGSDLVLL 184 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~---~~Eav~~ADIVIL 184 (582)
.| .+|.|+|.|.+|...++-++.. |.+|++..++ ++..+.+++.|.... + ..+ .+++....|+||-
T Consensus 194 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~Vi~~~~~-~~~~~~a~~lGa~~vi~--~~~~~~~~~~~~g~Dvvid 263 (369)
T 1uuf_A 194 PG-KKVGVVGIGGLGHMGIKLAHAM------GAHVVAFTTS-EAKREAAKALGADEVVN--SRNADEMAAHLKSFDFILN 263 (369)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESS-GGGHHHHHHHTCSEEEE--TTCHHHHHTTTTCEEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCcEEec--cccHHHHHHhhcCCCEEEE
Confidence 46 8999999999999999999888 8886555544 455778888886320 1 111 1222346799999
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
++.... .++.....++++-.++..
T Consensus 264 ~~g~~~---~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 264 TVAAPH---NLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp CCSSCC---CHHHHHTTEEEEEEEEEC
T ss_pred CCCCHH---HHHHHHHHhccCCEEEEe
Confidence 988532 234445566665554433
No 424
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.06 E-value=0.67 Score=46.85 Aligned_cols=92 Identities=17% Similarity=0.134 Sum_probs=59.8
Q ss_pred ccCCCEEEEEccc-hhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhh------ccC
Q 007987 108 FNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGS 179 (582)
Q Consensus 108 l~gikkIgIIG~G-smG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav------~~A 179 (582)
-.| ++|.|+|.| .+|.+.++-++.. |.+|++..++. +..+.+++.|.... |..-.+..+.+ ...
T Consensus 143 ~~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~~-~~~~~~~~lga~~~~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 143 QRN-DVLLVNACGSAIGHLFAQLSQIL------NFRLIAVTRNN-KHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp CTT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESSS-TTHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCC-CEEEEeCCccHHHHHHHHHHHHc------CCEEEEEeCCH-HHHHHHHhCCCcEEEeCCcccHHHHHHHHhCCCCC
Confidence 357 899999998 8999999999988 98877666544 45777888886420 11112333322 257
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
|+||-++........ ...|+++-.++..
T Consensus 215 Dvvid~~g~~~~~~~----~~~l~~~G~iv~~ 242 (340)
T 3gms_A 215 DAAIDSIGGPDGNEL----AFSLRPNGHFLTI 242 (340)
T ss_dssp EEEEESSCHHHHHHH----HHTEEEEEEEEEC
T ss_pred cEEEECCCChhHHHH----HHHhcCCCEEEEE
Confidence 999998886544332 3566666555443
No 425
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.05 E-value=1.4 Score=47.27 Aligned_cols=96 Identities=19% Similarity=0.151 Sum_probs=64.3
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcC-ceecCCCcCC----HHhhhccCCeEEEec
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAG-FTEENGTLGD----IYETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G-~~~~d~t~~~----~~Eav~~ADIVILaV 186 (582)
++|.|+|.|++|..+|+.|.+ +++|.+-..+..+....|.+.- ..+-.|...+ .++-+.++|+++.+|
T Consensus 236 ~~v~I~GgG~ig~~lA~~L~~-------~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T 308 (461)
T 4g65_A 236 RRIMIVGGGNIGASLAKRLEQ-------TYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALT 308 (461)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-------TSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECC
T ss_pred cEEEEEcchHHHHHHHHHhhh-------cCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcc
Confidence 789999999999999999854 5677777666555556666542 2211233333 234578999999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 187 SDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
.++..-=+..-++..+...+++....-.
T Consensus 309 ~~De~Ni~~~llAk~~gv~kvIa~vn~~ 336 (461)
T 4g65_A 309 NEDETNIMSAMLAKRMGAKKVMVLIQRG 336 (461)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECSCH
T ss_pred cCcHHHHHHHHHHHHcCCcccccccccc
Confidence 9876533334566667666777766543
No 426
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=90.05 E-value=0.68 Score=48.65 Aligned_cols=68 Identities=16% Similarity=0.114 Sum_probs=48.5
Q ss_pred ccCCCEEEEEccc-hhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHHHHHHc--------CceecCCCcCCHHh
Q 007987 108 FNGINQIGVIGWG-SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAEARAA--------GFTEENGTLGDIYE 174 (582)
Q Consensus 108 l~gikkIgIIG~G-smG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~~A~~~--------G~~~~d~t~~~~~E 174 (582)
|+| .||+|||=+ ++..+++..+... |+++.+.-... +.-.+.+++. ++.. ..+++|
T Consensus 186 l~g-lkva~vGD~~nva~Sl~~~l~~l------G~~v~~~~P~~~~~~~~i~~~~~~~a~~~~~g~~~~~----~~d~~e 254 (353)
T 3sds_A 186 LEG-LKIAWVGDANNVLFDLAIAATKM------GVNVAVATPRGYEIPSHIVELIQKAREGVQSPGNLTQ----TTVPEV 254 (353)
T ss_dssp CTT-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTCCCCHHHHHHHHHHHTTCSSCCCEEE----ESCHHH
T ss_pred cCC-CEEEEECCCchHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHhhhhccCCCeEEE----ECCHHH
Confidence 589 999999966 7888888888877 98887765432 2222333332 3333 568999
Q ss_pred hhccCCeEEEec
Q 007987 175 TISGSDLVLLLI 186 (582)
Q Consensus 175 av~~ADIVILaV 186 (582)
++++||+|+..+
T Consensus 255 av~~aDVvytd~ 266 (353)
T 3sds_A 255 AVKDADVIVTDT 266 (353)
T ss_dssp HTTTCSEEEECC
T ss_pred HhcCCCEEEeCC
Confidence 999999998754
No 427
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=90.03 E-value=0.67 Score=50.38 Aligned_cols=91 Identities=12% Similarity=0.217 Sum_probs=65.8
Q ss_pred cccCCCEEEEEccc----------hhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhh
Q 007987 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETI 176 (582)
Q Consensus 107 ~l~gikkIgIIG~G----------smG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav 176 (582)
.++| ++|+|.|+- +-...++..|.+. |.+|.+++..-.. . .++.. ..+.++++
T Consensus 350 ~~~~-~~v~vlGlafK~~tdD~R~Sp~~~i~~~L~~~------g~~V~~~DP~~~~-~-----~~~~~----~~~~~~~~ 412 (478)
T 3g79_A 350 KMDG-SKVAMLGWAFIKDSDDARNTPSEPYRDLCLKA------GASVMVHDPYVVN-Y-----PGVEI----SDNLEEVV 412 (478)
T ss_dssp CSTT-CEEEEECSSSSTTCSCCTTCTHHHHHHHHHHH------TCEEEEECSSCCC-B-----TTBCE----ESCHHHHH
T ss_pred CCCC-CEEEEEeeecCCCCcchhcCcHHHHHHHHHHC------CCEEEEECCCccc-c-----cCcce----ecCHHHHH
Confidence 4688 999999973 3467888888888 9998877654321 1 11221 36788999
Q ss_pred ccCCeEEEeccchhHHH-HHHHHHhcCC-CCcEEEEecCc
Q 007987 177 SGSDLVLLLISDAAQAD-NYEKIFSCMK-PNSILGLSHGF 214 (582)
Q Consensus 177 ~~ADIVILaVPd~a~~~-Vl~eI~~~Lk-~GaiL~~a~G~ 214 (582)
+++|+|+++|.-....+ -++.+...|+ +..+|++.-++
T Consensus 413 ~~ad~vvi~t~~~~f~~~d~~~~~~~~~~~~~~i~D~rn~ 452 (478)
T 3g79_A 413 RNADAIVVLAGHSAYSSLKADWAKKVSAKANPVIIDGRNV 452 (478)
T ss_dssp TTCSEEEECSCCHHHHSCCHHHHHHHHCCSSCEEEESSSC
T ss_pred hcCCEEEEecCCHHHHhhhHHHHHHHhccCCCEEEECCCC
Confidence 99999999999887764 2456777777 36788887665
No 428
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.01 E-value=0.39 Score=48.33 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=60.7
Q ss_pred ccCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhh------ccC
Q 007987 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGS 179 (582)
Q Consensus 108 l~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav------~~A 179 (582)
-.| ++|.|+| .|.+|.+.++.++.. |.+|++..++ .+..+.+++.|.... |....+..+.+ ...
T Consensus 147 ~~g-~~vlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 147 KKG-DYVLLFAAAGGVGLILNQLLKMK------GAHTIAVAST-DEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp CTT-CEEEESSTTBHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCc
Confidence 356 8999999 899999999999988 9887665554 445678888886320 11112232222 247
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
|+||-++... .++.....++++-.++..
T Consensus 219 D~vid~~g~~----~~~~~~~~l~~~G~iv~~ 246 (334)
T 3qwb_A 219 DASFDSVGKD----TFEISLAALKRKGVFVSF 246 (334)
T ss_dssp EEEEECCGGG----GHHHHHHHEEEEEEEEEC
T ss_pred eEEEECCChH----HHHHHHHHhccCCEEEEE
Confidence 9999999864 344445566666655544
No 429
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=89.93 E-value=0.29 Score=50.56 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=31.3
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecC
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~ 149 (582)
.+.| +||+|||.|..|..+++.+++. |+++++.+..
T Consensus 11 ~~~~-k~IlIlG~G~~g~~la~aa~~~------G~~vi~~d~~ 46 (389)
T 3q2o_A 11 ILPG-KTIGIIGGGQLGRMMALAAKEM------GYKIAVLDPT 46 (389)
T ss_dssp CCTT-SEEEEECCSHHHHHHHHHHHHT------TCEEEEEESS
T ss_pred CCCC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEeCC
Confidence 4578 9999999999999999999998 9998776543
No 430
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=89.91 E-value=0.43 Score=47.93 Aligned_cols=92 Identities=14% Similarity=0.106 Sum_probs=60.7
Q ss_pred cCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhh------ccCC
Q 007987 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (582)
Q Consensus 109 ~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav------~~AD 180 (582)
.| ++|.|+| .|.+|.+.++-++.. |.+|++..++ ....+.+++.|.... |..-.+..+.+ ...|
T Consensus 140 ~g-~~VlV~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 140 PG-EIILFHAAAGGVGSLACQWAKAL------GAKLIGTVSS-PEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEEcCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCce
Confidence 56 8999999 899999999999988 9887666554 444677778775310 11112232322 2578
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+||-++... .+......++++-.++...
T Consensus 212 vvid~~g~~----~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 212 VVYDGVGQD----TWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EEEESSCGG----GHHHHHTTEEEEEEEEECC
T ss_pred EEEECCChH----HHHHHHHHhcCCCEEEEEe
Confidence 999888863 3455556677766555443
No 431
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=89.87 E-value=0.72 Score=45.00 Aligned_cols=89 Identities=16% Similarity=0.115 Sum_probs=53.9
Q ss_pred cccCCCEEEEEccc---hhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 007987 107 AFNGINQIGVIGWG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 107 ~l~gikkIgIIG~G---smG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
.|+| |++.|-|.+ -+|.++|+.|.+. |.+|++..|+... .+.+.+. +. + ....++..
T Consensus 3 ~l~g-K~alVTGaa~~~GIG~aiA~~la~~------Ga~Vvi~~r~~~~-~~~~~~~-~~----------~-~~~~~~~~ 62 (256)
T 4fs3_A 3 NLEN-KTYVIMGIANKRSIAFGVAKVLDQL------GAKLVFTYRKERS-RKELEKL-LE----------Q-LNQPEAHL 62 (256)
T ss_dssp CCTT-CEEEEECCCSTTCHHHHHHHHHHHT------TCEEEEEESSGGG-HHHHHHH-HG----------G-GTCSSCEE
T ss_pred CCCC-CEEEEECCCCCchHHHHHHHHHHHC------CCEEEEEECCHHH-HHHHHHH-HH----------h-cCCCcEEE
Confidence 4789 999999975 4999999999998 9999888776433 3332221 00 0 11112222
Q ss_pred E---eccchhHHHHHHHHHhcCCCCcEEEEecCch
Q 007987 184 L---LISDAAQADNYEKIFSCMKPNSILGLSHGFL 215 (582)
Q Consensus 184 L---aVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~~ 215 (582)
+ .+.++...++++++...+.+=.+|+..+|+.
T Consensus 63 ~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~ 97 (256)
T 4fs3_A 63 YQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFA 97 (256)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCC
T ss_pred EEccCCCHHHHHHHHHHHHHHhCCCCEEEeccccc
Confidence 2 1344555667777665553333566667753
No 432
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=89.86 E-value=0.74 Score=50.14 Aligned_cols=74 Identities=22% Similarity=0.104 Sum_probs=49.6
Q ss_pred ccccCCCEEEEEccchhHHH-HHHHHHHhhhhhcCCceEEEEecCCc-ccHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 007987 106 DAFNGINQIGVIGWGSQGPA-QAQNLRDSLAEAKSDIVVKVGLRKGS-RSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~A-iA~nLrds~~~~g~G~~ViVg~r~~s-ks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
-+|++ ++|-|||.|-.|.+ +|+-|++. |++|.+.+.... ...+..++.|+....| .+.++...++|+||
T Consensus 15 ~~~~~-~~i~~iGiGg~Gms~lA~~l~~~------G~~V~~sD~~~~~~~~~~L~~~gi~~~~G--~~~~~~~~~~d~vV 85 (524)
T 3hn7_A 15 LYFQG-MHIHILGICGTFMGSLALLARAL------GHTVTGSDANIYPPMSTQLEQAGVTIEEG--YLIAHLQPAPDLVV 85 (524)
T ss_dssp ----C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESCCCTTHHHHHHHTTCEEEES--CCGGGGCSCCSEEE
T ss_pred eeecC-CEEEEEEecHhhHHHHHHHHHhC------CCEEEEECCCCCcHHHHHHHHCCCEEECC--CCHHHcCCCCCEEE
Confidence 45677 99999999999996 78888888 999887776532 3345556778865211 23444446799999
Q ss_pred E--eccc
Q 007987 184 L--LISD 188 (582)
Q Consensus 184 L--aVPd 188 (582)
+ ++|+
T Consensus 86 ~Spgi~~ 92 (524)
T 3hn7_A 86 VGNAMKR 92 (524)
T ss_dssp ECTTCCT
T ss_pred ECCCcCC
Confidence 8 3554
No 433
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=89.83 E-value=0.61 Score=50.07 Aligned_cols=68 Identities=16% Similarity=0.170 Sum_probs=49.8
Q ss_pred ccCCCEEEEEc-----cc---hhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHHH----HHHcCc--eecCCCc
Q 007987 108 FNGINQIGVIG-----WG---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGF--TEENGTL 169 (582)
Q Consensus 108 l~gikkIgIIG-----~G---smG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~~----A~~~G~--~~~d~t~ 169 (582)
|+| .||+||| +| ++..+++..+... |++|.+.-..+ +...+. +.+.|. .. .
T Consensus 186 l~G-lkva~vgd~~~s~Gd~nnVa~Sli~~l~~l------G~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~----~ 254 (418)
T 2yfk_A 186 LKG-KKVAMTWAYSPSYGKPLSVPQGIVGLMTRL------GMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTK----T 254 (418)
T ss_dssp GTT-CEEEEECCCCSSSCCCSHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEE----E
T ss_pred cCC-CEEEEEeccccccCccchHHHHHHHHHHHc------CCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEE----E
Confidence 788 9999997 34 4999999999887 99887776542 122222 345674 32 5
Q ss_pred CCHHhhhccCCeEEEec
Q 007987 170 GDIYETISGSDLVLLLI 186 (582)
Q Consensus 170 ~~~~Eav~~ADIVILaV 186 (582)
.+++|++++||+|+..+
T Consensus 255 ~d~~eav~~ADVVytd~ 271 (418)
T 2yfk_A 255 NSMAEAFKDADVVYPKS 271 (418)
T ss_dssp SCHHHHHTTCSEEEECC
T ss_pred cCHHHHhcCCCEEEEcc
Confidence 78999999999999875
No 434
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=89.75 E-value=0.31 Score=52.20 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=30.6
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHH-hhhhhcCCceEEEEecC
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRK 149 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrd-s~~~~g~G~~ViVg~r~ 149 (582)
|+| ++|+|+|+|++|..+|+.|+. . |.+|+...+.
T Consensus 210 l~g-ktvgI~G~G~VG~~vA~~l~~~~------G~kVv~~sD~ 245 (419)
T 1gtm_A 210 LKG-KTIAIQGYGNAGYYLAKIMSEDF------GMKVVAVSDS 245 (419)
T ss_dssp STT-CEEEEECCSHHHHHHHHHHHHTT------CCEEEEEECS
T ss_pred cCC-CEEEEEcCCHHHHHHHHHHHHhc------CCEEEEEeCC
Confidence 889 999999999999999999998 7 9988655444
No 435
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.71 E-value=0.37 Score=49.51 Aligned_cols=87 Identities=18% Similarity=0.148 Sum_probs=56.0
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHH-HcCceec-CCCcCC---HHhhhccCCeEE
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGTLGD---IYETISGSDLVL 183 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~-~~G~~~~-d~t~~~---~~Eav~~ADIVI 183 (582)
.| .+|.|+|.|.+|...++-++.. |.+|++..++. ...+.+. +.|.... | ..+ +.++....|+||
T Consensus 187 ~g-~~VlV~GaG~vG~~~~q~a~~~------Ga~Vi~~~~~~-~~~~~~~~~lGa~~v~~--~~~~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PG-KHIGIVGLGGLGHVAVKFAKAF------GSKVTVISTSP-SKKEEALKNFGADSFLV--SRDQEQMQAAAGTLDGII 256 (366)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEESCG-GGHHHHHHTSCCSEEEE--TTCHHHHHHTTTCEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHhcCCceEEe--ccCHHHHHHhhCCCCEEE
Confidence 67 8999999999999999999988 88876655543 4455655 6775310 1 112 223334679999
Q ss_pred Eeccch-hHHHHHHHHHhcCCCCcEEE
Q 007987 184 LLISDA-AQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 184 LaVPd~-a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
-++... .....+ +.|+++-.++
T Consensus 257 d~~g~~~~~~~~~----~~l~~~G~iv 279 (366)
T 1yqd_A 257 DTVSAVHPLLPLF----GLLKSHGKLI 279 (366)
T ss_dssp ECCSSCCCSHHHH----HHEEEEEEEE
T ss_pred ECCCcHHHHHHHH----HHHhcCCEEE
Confidence 998753 333333 4455544444
No 436
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=89.71 E-value=0.78 Score=46.04 Aligned_cols=91 Identities=18% Similarity=0.163 Sum_probs=59.5
Q ss_pred cCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCcee-cCCCc-CCHHhhhc-----cCC
Q 007987 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTE-ENGTL-GDIYETIS-----GSD 180 (582)
Q Consensus 109 ~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~-~d~t~-~~~~Eav~-----~AD 180 (582)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.+++.|... -|-.- .+..+.+. ..|
T Consensus 145 ~g-~~vlV~Ga~ggiG~~~~~~~~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 145 GG-ETVLVSAAAGAVGSVVGQIAKLK------GCKVVGAAGS-DEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SS-CEEEEESTTBHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEecCCCcHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHhcCCcEEEecCCHHHHHHHHHHHhCCCCe
Confidence 56 89999998 99999999999988 9887766554 34456667777521 01111 23333332 479
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+||.++... .++.....++++-.++..
T Consensus 217 ~vi~~~g~~----~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 217 CYFDNVGGE----FLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp EEEESSCHH----HHHHHHTTEEEEEEEEEC
T ss_pred EEEECCChH----HHHHHHHHHhcCCEEEEE
Confidence 999888753 355666677776655544
No 437
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=89.68 E-value=0.46 Score=47.86 Aligned_cols=80 Identities=14% Similarity=0.150 Sum_probs=46.7
Q ss_pred cccccccccCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcC-C---HHhh
Q 007987 101 FNLLPDAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLG-D---IYET 175 (582)
Q Consensus 101 f~~~~~~l~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~-~---~~Ea 175 (582)
++.....+++ |+|.|+| .|.+|..++..|.+. .|++|++..|..++........++....+.+. + +.++
T Consensus 15 ~~~~~~~m~~-~~vlVtGatG~iG~~l~~~L~~~-----~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~ 88 (372)
T 3slg_A 15 QTQGPGSMKA-KKVLILGVNGFIGHHLSKRILET-----TDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYH 88 (372)
T ss_dssp --------CC-CEEEEESCSSHHHHHHHHHHHHH-----SSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHH
T ss_pred hhcCCcccCC-CEEEEECCCChHHHHHHHHHHhC-----CCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHH
Confidence 4555566777 9999999 699999999999875 16788777776443222221134332111233 3 4457
Q ss_pred hccCCeEEEec
Q 007987 176 ISGSDLVLLLI 186 (582)
Q Consensus 176 v~~ADIVILaV 186 (582)
+++.|+||.+.
T Consensus 89 ~~~~d~Vih~A 99 (372)
T 3slg_A 89 VKKCDVILPLV 99 (372)
T ss_dssp HHHCSEEEECB
T ss_pred hccCCEEEEcC
Confidence 78899999754
No 438
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=89.68 E-value=0.4 Score=49.50 Aligned_cols=90 Identities=11% Similarity=0.069 Sum_probs=53.6
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcC-CceEEEEecCCc--ccHHHHHHcCceecCCCcCCH-HhhhccCCeEEEec
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKS-DIVVKVGLRKGS--RSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~-G~~ViVg~r~~s--ks~~~A~~~G~~~~d~t~~~~-~Eav~~ADIVILaV 186 (582)
+||+|+| .|.+|..+.+.|.+. ++ .++++...+..+ +... -.|... .+.+. .+..+++|+||+|+
T Consensus 4 ~kV~I~GAtG~iG~~llr~L~~~----~~p~~elv~i~s~~~~G~~~~---~~~~~i---~~~~~~~~~~~~vDvVf~a~ 73 (336)
T 2r00_A 4 FNVAIFGATGAVGETMLEVLQER----EFPVDELFLLASERSEGKTYR---FNGKTV---RVQNVEEFDWSQVHIALFSA 73 (336)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT----TCCEEEEEEEECTTTTTCEEE---ETTEEE---EEEEGGGCCGGGCSEEEECS
T ss_pred cEEEEECCCCHHHHHHHHHHhcC----CCCCEEEEEEECCCCCCCcee---ecCcee---EEecCChHHhcCCCEEEECC
Confidence 7899999 999999999988765 11 235544332211 1110 001110 01111 12346899999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 187 SDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
|.....+..+.. ++.|..+++.++-
T Consensus 74 g~~~s~~~a~~~---~~~G~~vId~s~~ 98 (336)
T 2r00_A 74 GGELSAKWAPIA---AEAGVVVIDNTSH 98 (336)
T ss_dssp CHHHHHHHHHHH---HHTTCEEEECSST
T ss_pred CchHHHHHHHHH---HHcCCEEEEcCCc
Confidence 988777666654 3467777776653
No 439
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=89.66 E-value=0.66 Score=46.09 Aligned_cols=69 Identities=29% Similarity=0.220 Sum_probs=44.1
Q ss_pred cccccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCC---HHhhhccCC
Q 007987 105 PDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSD 180 (582)
Q Consensus 105 ~~~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~---~~Eav~~AD 180 (582)
.+.+++ |+|.|.|. |-+|.++++.|.+. |++|++..|...+ .++....+.+.+ ..+++++.|
T Consensus 14 ~~~~~~-~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d 79 (347)
T 4id9_A 14 LVPRGS-HMILVTGSAGRVGRAVVAALRTQ------GRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVS 79 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHT------TCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCS
T ss_pred ccccCC-CEEEEECCCChHHHHHHHHHHhC------CCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCC
Confidence 356677 99999997 99999999999998 9988777765433 222211111333 456788999
Q ss_pred eEEEecc
Q 007987 181 LVLLLIS 187 (582)
Q Consensus 181 IVILaVP 187 (582)
+||.+..
T Consensus 80 ~vih~A~ 86 (347)
T 4id9_A 80 AVLHLGA 86 (347)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9998654
No 440
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.66 E-value=0.57 Score=47.13 Aligned_cols=92 Identities=15% Similarity=0.152 Sum_probs=61.2
Q ss_pred cCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHH-HHcCceec-CCCcCCHHhhhc-----cCC
Q 007987 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEA-RAAGFTEE-NGTLGDIYETIS-----GSD 180 (582)
Q Consensus 109 ~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A-~~~G~~~~-d~t~~~~~Eav~-----~AD 180 (582)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++. ...+.+ ++.|.... |..-.+..+.+. ..|
T Consensus 149 ~g-~~vlI~Ga~g~iG~~~~~~a~~~------Ga~Vi~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d 220 (336)
T 4b7c_A 149 NG-ETVVISGAAGAVGSVAGQIARLK------GCRVVGIAGGA-EKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGID 220 (336)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESSH-HHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCCH-HHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCce
Confidence 56 89999998 99999999999988 98876665543 345566 67776310 111123333332 479
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
+||-++.. +.++.....++++-.++...
T Consensus 221 ~vi~~~g~----~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 221 VFFDNVGG----EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp EEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCCc----chHHHHHHHHhhCCEEEEEe
Confidence 99998874 35666667787766655443
No 441
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=89.60 E-value=0.65 Score=47.57 Aligned_cols=92 Identities=15% Similarity=0.131 Sum_probs=60.6
Q ss_pred cCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc-----cCCe
Q 007987 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (582)
Q Consensus 109 ~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~-----~ADI 181 (582)
.| ++|.|+| .|.+|...++-++.. |.+|++..++ ....+.+++.|.... +....+..+.++ ..|+
T Consensus 163 ~g-~~VlV~Ga~G~iG~~~~q~a~~~------Ga~Vi~~~~~-~~~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~D~ 234 (362)
T 2c0c_A 163 EG-KKVLVTAAAGGTGQFAMQLSKKA------KCHVIGTCSS-DEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDV 234 (362)
T ss_dssp TT-CEEEETTTTBTTHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHCTTCEEE
T ss_pred CC-CEEEEeCCCcHHHHHHHHHHHhC------CCEEEEEECC-HHHHHHHHHcCCcEEEecCChhHHHHHHHhcCCCCCE
Confidence 56 8999999 799999999999988 8887655544 444677777886320 111123333332 4799
Q ss_pred EEEeccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 182 VLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 182 VILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
||-++... .++.....++++-.++...
T Consensus 235 vid~~g~~----~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 235 VYESVGGA----MFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp EEECSCTH----HHHHHHHHEEEEEEEEECC
T ss_pred EEECCCHH----HHHHHHHHHhcCCEEEEEe
Confidence 99999863 4555556666665555443
No 442
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=89.60 E-value=0.4 Score=47.76 Aligned_cols=78 Identities=14% Similarity=0.048 Sum_probs=49.9
Q ss_pred cccccccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-cCceecCCCcCC---HHhhhc
Q 007987 103 LLPDAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AGFTEENGTLGD---IYETIS 177 (582)
Q Consensus 103 ~~~~~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-~G~~~~d~t~~~---~~Eav~ 177 (582)
..++.++| |+|.|.|. |-+|.++++.|.+. |++|++..|......+.... .++....+.+.+ +.++++
T Consensus 13 ~~~~~~~~-~~vlVTGasG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~ 85 (330)
T 2pzm_A 13 GLVPRGSH-MRILITGGAGCLGSNLIEHWLPQ------GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFD 85 (330)
T ss_dssp -CCSTTTC-CEEEEETTTSHHHHHHHHHHGGG------TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHH
T ss_pred CCcccCCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHh
Confidence 34688899 99999996 99999999999998 99888777743321110000 122110111333 345666
Q ss_pred --cCCeEEEecc
Q 007987 178 --GSDLVLLLIS 187 (582)
Q Consensus 178 --~ADIVILaVP 187 (582)
+.|+||.+..
T Consensus 86 ~~~~D~vih~A~ 97 (330)
T 2pzm_A 86 SFKPTHVVHSAA 97 (330)
T ss_dssp HHCCSEEEECCC
T ss_pred hcCCCEEEECCc
Confidence 7899988764
No 443
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=89.46 E-value=1.2 Score=46.97 Aligned_cols=69 Identities=22% Similarity=0.178 Sum_probs=41.2
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCc-----eEEEEecCCccc----HHHHH--HcCcee--cC-CCcCCHHhhh
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI-----VVKVGLRKGSRS----FAEAR--AAGFTE--EN-GTLGDIYETI 176 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~-----~ViVg~r~~sks----~~~A~--~~G~~~--~d-~t~~~~~Eav 176 (582)
.||+||| .|.+|.+++..|... ++ .+++.+....+. .-.+. .++... .+ ....+..+++
T Consensus 33 ~KV~ViGAaG~VG~~la~~l~~~------~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~~~~y~~~ 106 (375)
T 7mdh_A 33 VNIAVSGAAGMISNHLLFKLASG------EVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVF 106 (375)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHT
T ss_pred CEEEEECCCChHHHHHHHHHHcC------CcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEecCCHHHh
Confidence 7899999 799999999999876 44 244433222222 11221 222210 00 0023456889
Q ss_pred ccCCeEEEec
Q 007987 177 SGSDLVLLLI 186 (582)
Q Consensus 177 ~~ADIVILaV 186 (582)
++||+||++-
T Consensus 107 ~daDvVVita 116 (375)
T 7mdh_A 107 EDVDWALLIG 116 (375)
T ss_dssp TTCSEEEECC
T ss_pred CCCCEEEEcC
Confidence 9999999964
No 444
>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}
Probab=89.39 E-value=0.89 Score=48.08 Aligned_cols=90 Identities=14% Similarity=0.171 Sum_probs=55.1
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEE-EE-ec-CCcccHHHH-------------HHcCceecCCCcCCHHh
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVK-VG-LR-KGSRSFAEA-------------RAAGFTEENGTLGDIYE 174 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~Vi-Vg-~r-~~sks~~~A-------------~~~G~~~~d~t~~~~~E 174 (582)
.|||||| .|..|.-+.+-|.+. ..+++. +. .+ ...+..... .+.-+.. .+.++
T Consensus 20 ~kVaIvGAtG~vG~ell~lL~~h-----p~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~-----~~~~~ 89 (381)
T 3hsk_A 20 KKAGVLGATGSVGQRFILLLSKH-----PEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQE-----CKPEG 89 (381)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTC-----SSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEE-----SSSCT
T ss_pred cEEEEECCCChHHHHHHHHHHcC-----CCceEEEeeccccccCCCHHHhcccccccccccccccceEEe-----Cchhh
Confidence 6899999 699999999877654 123543 22 22 222333322 1111110 12221
Q ss_pred hhccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 175 TISGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 175 av~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
.++++|+||+|+|.....++.+++. +.|..|++.++-
T Consensus 90 ~~~~~Dvvf~alp~~~s~~~~~~~~---~~G~~VIDlSa~ 126 (381)
T 3hsk_A 90 NFLECDVVFSGLDADVAGDIEKSFV---EAGLAVVSNAKN 126 (381)
T ss_dssp TGGGCSEEEECCCHHHHHHHHHHHH---HTTCEEEECCST
T ss_pred hcccCCEEEECCChhHHHHHHHHHH---hCCCEEEEcCCc
Confidence 4678999999999988888777654 468878877653
No 445
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=89.28 E-value=0.5 Score=46.42 Aligned_cols=66 Identities=20% Similarity=0.231 Sum_probs=44.5
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec--CCCcCCHHhhhccCCeEEEecc
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE--NGTLGDIYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~--d~t~~~~~Eav~~ADIVILaVP 187 (582)
|+|.|.| .|.+|.++++.|.+. |++|++..|. +...+ .. ++... |-...++.+++++.|+||.+..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~------g~~V~~~~r~-~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~ 71 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKND------GNTPIILTRS-IGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAA 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESC-CC--------CCEEEECCCCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhC------CCEEEEEeCC-CCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEccc
Confidence 7999999 699999999999998 9998877776 22222 11 43321 1111224567889999998764
No 446
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=89.15 E-value=0.73 Score=46.64 Aligned_cols=83 Identities=14% Similarity=0.188 Sum_probs=51.0
Q ss_pred cccccccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhcc
Q 007987 99 DLFNLLPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISG 178 (582)
Q Consensus 99 ~~f~~~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ 178 (582)
+.|....+..+| +||++||+ | +.+...+ .. +.++.|.+++.. .|... ....++++++
T Consensus 130 d~~~~~~~~~~g-~kV~vIG~--~-P~i~~~l-~~------~~~v~V~d~~p~--------~g~~p----~~~~e~ll~~ 186 (270)
T 2h1q_A 130 DPFIMSQNEVKG-KKVGVVGH--F-PHLESLL-EP------ICDLSILEWSPE--------EGDYP----LPASEFILPE 186 (270)
T ss_dssp CHHHHTTTTTTT-SEEEEESC--C-TTHHHHH-TT------TSEEEEEESSCC--------TTCEE----GGGHHHHGGG
T ss_pred cHHHHHHhhcCC-CEEEEECC--C-HHHHHHH-hC------CCCEEEEECCCC--------CCCCC----hHHHHHHhhc
Confidence 456544566788 99999999 4 5666644 44 678888887643 24432 2346678999
Q ss_pred CCeEEEeccchhHHHHHHHHHhcCCCC
Q 007987 179 SDLVLLLISDAAQADNYEKIFSCMKPN 205 (582)
Q Consensus 179 ADIVILaVPd~a~~~Vl~eI~~~Lk~G 205 (582)
||+|++.-. ...-..++.|..+.+++
T Consensus 187 aD~viiTGs-TlvN~Ti~~lL~~~~~a 212 (270)
T 2h1q_A 187 CDYVYITCA-SVVDKTLPRLLELSRNA 212 (270)
T ss_dssp CSEEEEETH-HHHHTCHHHHHHHTTTS
T ss_pred CCEEEEEee-eeecCCHHHHHHhCccC
Confidence 999887532 22223344444444443
No 447
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=89.07 E-value=0.84 Score=46.52 Aligned_cols=92 Identities=15% Similarity=0.111 Sum_probs=58.7
Q ss_pred ccCCCEEEEEccchhHHHH-HHHH-HHhhhhhcCCce-EEEEecCCcc---cHHHHHHcCceecCCCcCCHHhhhc----
Q 007987 108 FNGINQIGVIGWGSQGPAQ-AQNL-RDSLAEAKSDIV-VKVGLRKGSR---SFAEARAAGFTEENGTLGDIYETIS---- 177 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~Ai-A~nL-rds~~~~g~G~~-ViVg~r~~sk---s~~~A~~~G~~~~d~t~~~~~Eav~---- 177 (582)
+++ .+|.|+|.|.+|... ++-+ +.. |.+ |++..++. . ..+.+++.|....|..-.+..+ +.
T Consensus 171 ~~~-~~VlV~GaG~vG~~a~iqla~k~~------Ga~~Vi~~~~~~-~~~~~~~~~~~lGa~~v~~~~~~~~~-i~~~~g 241 (357)
T 2b5w_A 171 WDP-SSAFVLGNGSLGLLTLAMLKVDDK------GYENLYCLGRRD-RPDPTIDIIEELDATYVDSRQTPVED-VPDVYE 241 (357)
T ss_dssp CCC-CEEEEECCSHHHHHHHHHHHHCTT------CCCEEEEEECCC-SSCHHHHHHHHTTCEEEETTTSCGGG-HHHHSC
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHHHc------CCcEEEEEeCCc-ccHHHHHHHHHcCCcccCCCccCHHH-HHHhCC
Confidence 345 799999999999999 8888 766 886 76555443 3 4778888997531111112223 32
Q ss_pred cCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 178 ~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
..|+||-++.... .++.....++++-.++..
T Consensus 242 g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 242 QMDFIYEATGFPK---HAIQSVQALAPNGVGALL 272 (357)
T ss_dssp CEEEEEECSCCHH---HHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCChH---HHHHHHHHHhcCCEEEEE
Confidence 4799999988642 344445556665554433
No 448
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=89.04 E-value=0.7 Score=48.27 Aligned_cols=70 Identities=10% Similarity=0.027 Sum_probs=48.7
Q ss_pred cccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHHH----HHHcCceecCCCcCCHHhhhc
Q 007987 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFAE----ARAAGFTEENGTLGDIYETIS 177 (582)
Q Consensus 107 ~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~~----A~~~G~~~~d~t~~~~~Eav~ 177 (582)
.|+| .||++||= +++..|++..+... |+++.+.-.++ ..-.+. +.+.|.... ...+++ +++
T Consensus 172 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~--~~~d~~-av~ 241 (339)
T 4a8t_A 172 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 241 (339)
T ss_dssp CGGG-CEEEEESSCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHCCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EECChh-HHc
Confidence 5888 99999994 68999999999887 98887765432 112222 345563210 146788 999
Q ss_pred cCCeEEEec
Q 007987 178 GSDLVLLLI 186 (582)
Q Consensus 178 ~ADIVILaV 186 (582)
+||+|+.-+
T Consensus 242 ~aDvvytd~ 250 (339)
T 4a8t_A 242 GADFLYTDV 250 (339)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecC
Confidence 999999743
No 449
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.03 E-value=0.52 Score=47.23 Aligned_cols=91 Identities=18% Similarity=0.160 Sum_probs=62.8
Q ss_pred ccCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCC-HHhhhccCCeEEE
Q 007987 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGD-IYETISGSDLVLL 184 (582)
Q Consensus 108 l~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~-~~Eav~~ADIVIL 184 (582)
-.| .+|.|+| .|.+|...++-++.. |.+|++.. .. +..+.+++.|.... |..-.+ ..+.++..|+||-
T Consensus 151 ~~g-~~vlV~Ga~G~vG~~a~q~a~~~------Ga~vi~~~-~~-~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 151 KQG-DVVLIHAGAGGVGHLAIQLAKQK------GTTVITTA-SK-RNHAFLKALGAEQCINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp CTT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEE-CH-HHHHHHHHHTCSEEEETTTSCHHHHCCSCEEEEEE
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHc------CCEEEEEe-cc-chHHHHHHcCCCEEEeCCCcchhhhhccCCCEEEE
Confidence 356 8999997 999999999999988 88876554 32 33778888887420 111223 5556678999999
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
++..... ......++++-.++..
T Consensus 222 ~~g~~~~----~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 222 LVGGDVG----IQSIDCLKETGCIVSV 244 (321)
T ss_dssp SSCHHHH----HHHGGGEEEEEEEEEC
T ss_pred CCCcHHH----HHHHHhccCCCEEEEe
Confidence 9885433 4555677776655544
No 450
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=88.99 E-value=0.87 Score=46.99 Aligned_cols=73 Identities=11% Similarity=0.071 Sum_probs=51.9
Q ss_pred ccccCCCEEEEEcc---chhHHHHHHHHHHhhhhhcCCceEEEEecC----CcccHHHHHHcCceecCCCcCCHHhhhcc
Q 007987 106 DAFNGINQIGVIGW---GSQGPAQAQNLRDSLAEAKSDIVVKVGLRK----GSRSFAEARAAGFTEENGTLGDIYETISG 178 (582)
Q Consensus 106 ~~l~gikkIgIIG~---GsmG~AiA~nLrds~~~~g~G~~ViVg~r~----~sks~~~A~~~G~~~~d~t~~~~~Eav~~ 178 (582)
..|+| .||++||= |++..|++..+... .|+++.+.-.+ +..-.+.+++.|.... ...+++|++++
T Consensus 150 g~l~g-l~va~vGD~~~~rva~Sl~~~~~~~-----~g~~v~~~~P~~~~~~~~~~~~~~~~g~~~~--~~~d~~eav~~ 221 (310)
T 3csu_A 150 GRLDN-LHVAMVGDLKYGRTVHSLTQALAKF-----DGNRFYFIAPDALAMPQYILDMLDEKGIAWS--LHSSIEEVMAE 221 (310)
T ss_dssp SCSSS-CEEEEESCTTTCHHHHHHHHHHHTS-----SSCEEEEECCGGGCCCHHHHHHHHHTTCCEE--ECSCGGGTTTT
T ss_pred CCcCC-cEEEEECCCCCCchHHHHHHHHHhC-----CCCEEEEECCcccccCHHHHHHHHHcCCeEE--EEcCHHHHhcC
Confidence 34788 99999997 58999999988653 17787776543 1223355666775310 14689999999
Q ss_pred CCeEEEec
Q 007987 179 SDLVLLLI 186 (582)
Q Consensus 179 ADIVILaV 186 (582)
||+|+..+
T Consensus 222 aDvvyt~~ 229 (310)
T 3csu_A 222 VDILYMTR 229 (310)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 99999865
No 451
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=88.97 E-value=1.1 Score=48.23 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=66.3
Q ss_pred cccCCCEEEEEcc----------chhHHHHHHHHHHhhhhhcCCceEEEEecCCccc--HHHHHH-cC-------ceecC
Q 007987 107 AFNGINQIGVIGW----------GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS--FAEARA-AG-------FTEEN 166 (582)
Q Consensus 107 ~l~gikkIgIIG~----------GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks--~~~A~~-~G-------~~~~d 166 (582)
.++| ++|+|.|+ .+-...++..|.+. |.+|.+++..-... ...... .+ +..
T Consensus 332 ~~~~-~~v~vlGlafK~~~dd~R~Spa~~i~~~L~~~------g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~~~~~~-- 402 (481)
T 2o3j_A 332 TVTD-KKIAIFGFAFKKNTGDTRESSAIHVIKHLMEE------HAKLSVYDPKVQKSQMLNDLASVTSAQDVERLITV-- 402 (481)
T ss_dssp CCTT-CEEEEECCSSSTTCCCCTTCHHHHHHHHHHHT------TCEEEEECSSSCHHHHHHHHHHHSCHHHHHHHEEE--
T ss_pred ccCC-CeEEEEeeeeCCCCCccccChHHHHHHHHHHC------CCEEEEECCCCCchhhHHHHHhhhccccccCceee--
Confidence 4688 99999997 35666777778777 88887766542211 112221 11 232
Q ss_pred CCcCCHHhhhccCCeEEEeccchhHHHH-HHHHHhcCCCCcEEEEecCc
Q 007987 167 GTLGDIYETISGSDLVLLLISDAAQADN-YEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 167 ~t~~~~~Eav~~ADIVILaVPd~a~~~V-l~eI~~~Lk~GaiL~~a~G~ 214 (582)
+.+..++++++|.|+++|.-.....+ ++++...|+...+|.+.-++
T Consensus 403 --~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~~~~i~D~r~~ 449 (481)
T 2o3j_A 403 --ESDPYAAARGAHAIVVLTEWDEFVELNYSQIHNDMQHPAAIFDGRLI 449 (481)
T ss_dssp --ESSHHHHHTTCSEEEECSCCGGGTTSCHHHHHHHSCSSCEEEESSSC
T ss_pred --cCCHHHHHcCCCEEEEcCCcHHhhccCHHHHHHhcCCCCEEEECCCC
Confidence 35778899999999999998877653 56777778776677777665
No 452
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.93 E-value=2.9 Score=42.90 Aligned_cols=93 Identities=16% Similarity=0.104 Sum_probs=60.4
Q ss_pred ccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc-----cCC
Q 007987 108 FNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSD 180 (582)
Q Consensus 108 l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~-----~AD 180 (582)
-.| .+|.|+|. |.+|...++-++.. |.+|++. . +++..+.+++.|.... |..-.+..+.++ ..|
T Consensus 163 ~~g-~~VlV~Ga~G~vG~~a~qla~~~------Ga~Vi~~-~-~~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKP-VYVLVYGGSTATATVTMQMLRLS------GYIPIAT-C-SPHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSC-CEEEEESTTSHHHHHHHHHHHHT------TCEEEEE-E-CGGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCC
T ss_pred CCC-cEEEEECCCcHHHHHHHHHHHHC------CCEEEEE-e-CHHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCcc
Confidence 467 89999999 89999999999988 8877554 3 3456788999997420 111123333332 379
Q ss_pred eEEEeccchhHHHHHHHHHhcC-CCCcEEEEec
Q 007987 181 LVLLLISDAAQADNYEKIFSCM-KPNSILGLSH 212 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~L-k~GaiL~~a~ 212 (582)
+||-++.... .++.....| +++-.++...
T Consensus 234 ~v~d~~g~~~---~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 234 YALDCITNVE---STTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEEESSCSHH---HHHHHHHHSCTTCEEEEESS
T ss_pred EEEECCCchH---HHHHHHHHhhcCCCEEEEEe
Confidence 9999998643 234444455 4555555443
No 453
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=88.93 E-value=2.7 Score=42.73 Aligned_cols=70 Identities=20% Similarity=0.260 Sum_probs=46.3
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccH-HHHHH-cCceecCCC-cCC---HHhhhccCCeEEE
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSF-AEARA-AGFTEENGT-LGD---IYETISGSDLVLL 184 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~-~~A~~-~G~~~~d~t-~~~---~~Eav~~ADIVIL 184 (582)
++|.|.| .|.+|.++++.|.+. |++|++..|+.++.. +.... .++....+. +.+ +.++++++|+||.
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAV------GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHT------TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence 7899999 599999999999988 888877777644321 11111 133221112 223 4567889999997
Q ss_pred ecc
Q 007987 185 LIS 187 (582)
Q Consensus 185 aVP 187 (582)
+..
T Consensus 80 ~a~ 82 (352)
T 1xgk_A 80 NTT 82 (352)
T ss_dssp CCC
T ss_pred cCC
Confidence 664
No 454
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=88.90 E-value=0.77 Score=40.14 Aligned_cols=94 Identities=18% Similarity=0.131 Sum_probs=55.1
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhc--cCCeEEEeccch
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETIS--GSDLVLLLISDA 189 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~--~ADIVILaVPd~ 189 (582)
+++.|||.|..|..++..|++. .|++++...+.+..... ..-.|+.+. + ..++.+.++ +.|.|++++|..
T Consensus 5 ~~vlIiGaG~~g~~l~~~l~~~-----~g~~vvg~~d~~~~~~g-~~i~g~pV~-g-~~~l~~~~~~~~id~viia~~~~ 76 (141)
T 3nkl_A 5 KKVLIYGAGSAGLQLANMLRQG-----KEFHPIAFIDDDRKKHK-TTMQGITIY-R-PKYLERLIKKHCISTVLLAVPSA 76 (141)
T ss_dssp EEEEEECCSHHHHHHHHHHHHS-----SSEEEEEEECSCGGGTT-CEETTEEEE-C-GGGHHHHHHHHTCCEEEECCTTS
T ss_pred CEEEEECCCHHHHHHHHHHHhC-----CCcEEEEEEECCcccCC-CEecCeEEE-C-HHHHHHHHHHCCCCEEEEeCCCC
Confidence 7899999999999999999875 17777555554432110 011355431 1 234555544 578999999965
Q ss_pred hHHHHHHHHHhc-CCCCcEEEEecCc
Q 007987 190 AQADNYEKIFSC-MKPNSILGLSHGF 214 (582)
Q Consensus 190 a~~~Vl~eI~~~-Lk~GaiL~~a~G~ 214 (582)
.. +...++... .+.|.-+.+...+
T Consensus 77 ~~-~~~~~i~~~l~~~gv~v~~vP~~ 101 (141)
T 3nkl_A 77 SQ-VQKKVIIESLAKLHVEVLTIPNL 101 (141)
T ss_dssp CH-HHHHHHHHHHHTTTCEEEECCCH
T ss_pred CH-HHHHHHHHHHHHcCCeEEECCCH
Confidence 43 223333322 2345555555544
No 455
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=88.89 E-value=0.45 Score=48.43 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=28.8
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEec
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 148 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r 148 (582)
||||+|||-|..|..++..+++. |+++++.+.
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~------G~~vv~vd~ 32 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKA------GMKVVLVDK 32 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------TCEEEEEES
T ss_pred CCEEEEECCCHHHHHHHHHHHHC------CCEEEEEeC
Confidence 79999999999999999999998 998877654
No 456
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=88.89 E-value=0.85 Score=42.86 Aligned_cols=73 Identities=15% Similarity=0.197 Sum_probs=48.0
Q ss_pred ccCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCc--eEEEEecCCcccHHHHHHcCceecCCCc---CCHHhhhccCCe
Q 007987 108 FNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI--VVKVGLRKGSRSFAEARAAGFTEENGTL---GDIYETISGSDL 181 (582)
Q Consensus 108 l~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~--~ViVg~r~~sks~~~A~~~G~~~~d~t~---~~~~Eav~~ADI 181 (582)
+++ |+|.|.| .|.+|.++++.|.+. |. +|++..|+..+..+.. ..++......+ .++.+++++.|+
T Consensus 16 m~~-~~vlVtGasg~iG~~l~~~L~~~------G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 16 MQN-KSVFILGASGETGRVLLKEILEQ------GLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp HTC-CEEEEECTTSHHHHHHHHHHHHH------TCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred hcC-CeEEEECCCcHHHHHHHHHHHcC------CCCCEEEEEEcCCCCccccc-cCCceEEecCcCCHHHHHHHhcCCCE
Confidence 567 8999999 699999999999998 98 8887777643321111 11221100112 234567778999
Q ss_pred EEEeccc
Q 007987 182 VLLLISD 188 (582)
Q Consensus 182 VILaVPd 188 (582)
||.+...
T Consensus 88 vi~~ag~ 94 (242)
T 2bka_A 88 GFCCLGT 94 (242)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9998754
No 457
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=88.85 E-value=0.59 Score=47.66 Aligned_cols=91 Identities=19% Similarity=0.230 Sum_probs=59.6
Q ss_pred cCCCEEEEE-ccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc-----cCCe
Q 007987 109 NGINQIGVI-GWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSDL 181 (582)
Q Consensus 109 ~gikkIgII-G~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~-----~ADI 181 (582)
.| ++|.|+ |.|.+|.+.++.++.. |.+|++..++ .+..+.+++.|.... |..-.+..+.+. ..|+
T Consensus 167 ~g-~~VlV~Gg~g~iG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~lGa~~~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 167 EG-ESVLIHGGTSGIGTTAIQLARAF------GAEVYATAGS-TGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHSSCEEE
T ss_pred CC-CEEEEEcCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHhcCCCEEEeCCchHHHHHHHHHhCCCceE
Confidence 46 899999 6899999999999988 9887666554 344677777776320 111123333332 4799
Q ss_pred EEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 182 VLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 182 VILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
||-++.... ++.....++++-.++..
T Consensus 239 vid~~g~~~----~~~~~~~l~~~G~iv~~ 264 (353)
T 4dup_A 239 ILDMIGAAY----FERNIASLAKDGCLSII 264 (353)
T ss_dssp EEESCCGGG----HHHHHHTEEEEEEEEEC
T ss_pred EEECCCHHH----HHHHHHHhccCCEEEEE
Confidence 999988653 44445566666555443
No 458
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=88.65 E-value=0.92 Score=48.37 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=49.8
Q ss_pred cccCCCEEEEEcc-----c---hhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHH----HHHHcCceecCCCcC
Q 007987 107 AFNGINQIGVIGW-----G---SQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLG 170 (582)
Q Consensus 107 ~l~gikkIgIIG~-----G---smG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~----~A~~~G~~~~d~t~~ 170 (582)
.|+| +||+|||. | ++..|++..+... |+++.+.-..+ +...+ .|.+.|.... ...
T Consensus 188 ~l~G-lkva~vgd~~~~~G~~nnVa~Sli~~~~~l------G~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~--~~~ 258 (399)
T 3q98_A 188 NLKG-KKIAMTWAYSPSYGKPLSVPQGIIGLMTRF------GMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFR--QVT 258 (399)
T ss_dssp GGTT-CEEEEECCCCSSCCCCTHHHHHHHHHHGGG------TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEE--EES
T ss_pred ccCC-CEEEEEEecccccCcchHHHHHHHHHHHHc------CCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEE--EEc
Confidence 4688 89999984 4 7889999988877 98887765542 22222 2345564310 157
Q ss_pred CHHhhhccCCeEEEec
Q 007987 171 DIYETISGSDLVLLLI 186 (582)
Q Consensus 171 ~~~Eav~~ADIVILaV 186 (582)
+++|++++||+|..-+
T Consensus 259 d~~eav~~aDvVytd~ 274 (399)
T 3q98_A 259 SMEEAFKDADIVYPKS 274 (399)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhCCCCEEEecC
Confidence 8999999999998865
No 459
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=88.47 E-value=0.89 Score=47.70 Aligned_cols=94 Identities=18% Similarity=0.130 Sum_probs=53.2
Q ss_pred CCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHH--H----cC------------ceecCCC---c
Q 007987 111 INQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR--A----AG------------FTEENGT---L 169 (582)
Q Consensus 111 ikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~--~----~G------------~~~~d~t---~ 169 (582)
+.||||+|+|.+|+-+.+.|... ..++|+...++.......+. + .| +.. ++. +
T Consensus 17 ~ikVgI~G~G~iGr~llR~l~~~-----p~veivaindp~~~~~~~a~ll~~ds~hg~~~~~v~~~~~~l~v-~g~~i~v 90 (354)
T 3cps_A 17 QGTLGINGFGRIGRLVLRACMER-----NDITVVAINDPFMDVEYMAYLLKYDSVHGNFNGTVEVSGKDLCI-NGKVVKV 90 (354)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC-----SSCEEEEEECTTSCHHHHHHHHHCCTTTCSCSSCEEECC-CEEE-TTEEEEE
T ss_pred ceEEEEECCCHHHHHHHHHHHcC-----CCeEEEEecCCCCChhHhhhhhcccccCCCCCCcEEEeCCEEEE-CCeEEEE
Confidence 46899999999999999988764 14676544431111111111 1 11 100 000 1
Q ss_pred ---CCHHhhh---ccCCeEEEeccchhHHHHHHHHHhcCCCCc--EEEEecC
Q 007987 170 ---GDIYETI---SGSDLVLLLISDAAQADNYEKIFSCMKPNS--ILGLSHG 213 (582)
Q Consensus 170 ---~~~~Eav---~~ADIVILaVPd~a~~~Vl~eI~~~Lk~Ga--iL~~a~G 213 (582)
.+++++- .++|+||.++|.....+..+ .+++.|+ +|++..+
T Consensus 91 ~~~~dp~~i~w~~~~vDvV~eatg~~~s~e~a~---~~l~~GakkvVId~pa 139 (354)
T 3cps_A 91 FQAKDPAEIPWGASGAQIVCESTGVFTTEEKAS---LHLKGGAKKVIISAPP 139 (354)
T ss_dssp ECCSCGGGCCHHHHTCCEEEECSSSCCSHHHHG---GGGTTTCSEEEESSCC
T ss_pred EecCChHHCCcccCCCCEEEECCCchhhHHHHH---HHHHcCCcEEEEeCCC
Confidence 1333321 47899999999876655443 4566776 6665543
No 460
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=88.42 E-value=0.6 Score=46.60 Aligned_cols=87 Identities=15% Similarity=0.140 Sum_probs=56.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEeccc
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLISD 188 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVPd 188 (582)
.| .+|.|+|.|.+|...++-++.. |.+|++.. +.+..+.+++.|.... +.+.+++-...|+||-++..
T Consensus 142 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~Vi~~~--~~~~~~~~~~lGa~~v---~~d~~~v~~g~Dvv~d~~g~ 209 (315)
T 3goh_A 142 KQ-REVLIVGFGAVNNLLTQMLNNA------GYVVDLVS--ASLSQALAAKRGVRHL---YREPSQVTQKYFAIFDAVNS 209 (315)
T ss_dssp SC-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEC--SSCCHHHHHHHTEEEE---ESSGGGCCSCEEEEECC---
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCEEEEEE--ChhhHHHHHHcCCCEE---EcCHHHhCCCccEEEECCCc
Confidence 57 8999999999999999999988 88876554 4556888999997531 22222222457999988875
Q ss_pred hhHHHHHHHHHhcCCCCcEEEEe
Q 007987 189 AAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 189 ~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
... ......++++-.++..
T Consensus 210 ~~~----~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 210 QNA----AALVPSLKANGHIICI 228 (315)
T ss_dssp --------TTGGGEEEEEEEEEE
T ss_pred hhH----HHHHHHhcCCCEEEEE
Confidence 432 3445667776555444
No 461
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.38 E-value=0.51 Score=45.56 Aligned_cols=89 Identities=12% Similarity=0.049 Sum_probs=53.4
Q ss_pred ccccCCCEEEEEcc-ch-hHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEE
Q 007987 106 DAFNGINQIGVIGW-GS-QGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVL 183 (582)
Q Consensus 106 ~~l~gikkIgIIG~-Gs-mG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVI 183 (582)
..++| |++.|.|. |. +|.++++.|.+. |.+|++..|+..+..+...+. . + ....++.+
T Consensus 18 ~~l~~-k~vlITGasg~GIG~~~a~~l~~~------G~~V~~~~r~~~~~~~~~~~l--~----------~-~~~~~~~~ 77 (266)
T 3o38_A 18 GLLKG-KVVLVTAAAGTGIGSTTARRALLE------GADVVISDYHERRLGETRDQL--A----------D-LGLGRVEA 77 (266)
T ss_dssp STTTT-CEEEESSCSSSSHHHHHHHHHHHT------TCEEEEEESCHHHHHHHHHHH--H----------T-TCSSCEEE
T ss_pred cCCCC-CEEEEECCCCCchHHHHHHHHHHC------CCEEEEecCCHHHHHHHHHHH--H----------h-cCCCceEE
Confidence 34788 99999998 85 999999999998 999877766533222211111 0 0 01122333
Q ss_pred Ee---ccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 184 LL---ISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 184 La---VPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
+. ..++...++++++.....+=.+|+..+|+
T Consensus 78 ~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 78 VVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp EECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred EEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCc
Confidence 32 22344456677766554433467777775
No 462
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=88.38 E-value=0.81 Score=48.12 Aligned_cols=70 Identities=10% Similarity=0.033 Sum_probs=48.7
Q ss_pred cccCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCC----cccHH----HHHHcCceecCCCcCCHHhhhc
Q 007987 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG----SRSFA----EARAAGFTEENGTLGDIYETIS 177 (582)
Q Consensus 107 ~l~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~----sks~~----~A~~~G~~~~d~t~~~~~Eav~ 177 (582)
.|+| .||+||| .+++..|++..+... |+++.+.-.++ ..-.+ .+.+.|.... ...+++ +++
T Consensus 150 ~l~g-lkva~vGD~~rva~Sl~~~~~~~------G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~--~~~d~~-av~ 219 (355)
T 4a8p_A 150 KLED-CKVVFVGDATQVCFSLGLITTKM------GMNFVHFGPEGFQLNEEHQAKLAKNCEVSGGSFL--VTDDAS-SVE 219 (355)
T ss_dssp CGGG-CEEEEESCCCHHHHHHHHHHHHT------TCEEEEECCTTSSCCHHHHHHHHHHHHHHSCEEE--EECCGG-GGT
T ss_pred CCCC-CEEEEECCCchhHHHHHHHHHHc------CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEE--EECCHH-HHc
Confidence 5888 9999999 468999999999887 98887765432 11222 2345564210 146788 999
Q ss_pred cCCeEEEec
Q 007987 178 GSDLVLLLI 186 (582)
Q Consensus 178 ~ADIVILaV 186 (582)
++|+|+.-+
T Consensus 220 ~aDVVytd~ 228 (355)
T 4a8p_A 220 GADFLYTDV 228 (355)
T ss_dssp TCSEEEECC
T ss_pred CCCEEEecc
Confidence 999999743
No 463
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=88.28 E-value=1 Score=45.53 Aligned_cols=92 Identities=18% Similarity=0.206 Sum_probs=58.8
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCC-ceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhh----c--cC
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI----S--GS 179 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G-~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav----~--~A 179 (582)
-.| .+|.|+|.|.+|...++-++.. | .+|++ ...+.+..+.+++.|.... +. -.+..+.+ . ..
T Consensus 170 ~~g-~~vlv~GaG~vG~~a~qla~~~------g~~~Vi~-~~~~~~~~~~~~~lGa~~~i~~-~~~~~~~v~~~t~g~g~ 240 (345)
T 3jv7_A 170 GPG-STAVVIGVGGLGHVGIQILRAV------SAARVIA-VDLDDDRLALAREVGADAAVKS-GAGAADAIRELTGGQGA 240 (345)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHH------CCCEEEE-EESCHHHHHHHHHTTCSEEEEC-STTHHHHHHHHHGGGCE
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEE-EcCCHHHHHHHHHcCCCEEEcC-CCcHHHHHHHHhCCCCC
Confidence 356 8999999999999999988876 4 45554 4444556788899887421 10 11222222 1 58
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
|+||-++.... .++.....++++-.++..
T Consensus 241 d~v~d~~G~~~---~~~~~~~~l~~~G~iv~~ 269 (345)
T 3jv7_A 241 TAVFDFVGAQS---TIDTAQQVVAVDGHISVV 269 (345)
T ss_dssp EEEEESSCCHH---HHHHHHHHEEEEEEEEEC
T ss_pred eEEEECCCCHH---HHHHHHHHHhcCCEEEEE
Confidence 99999998753 344445556666555544
No 464
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=88.13 E-value=3.7 Score=40.38 Aligned_cols=71 Identities=17% Similarity=0.147 Sum_probs=44.3
Q ss_pred CCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCC-cccHH---HHHHcC-ceecCCCcCC---HHhhhcc--C
Q 007987 111 INQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKG-SRSFA---EARAAG-FTEENGTLGD---IYETISG--S 179 (582)
Q Consensus 111 ikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~-sks~~---~A~~~G-~~~~d~t~~~---~~Eav~~--A 179 (582)
||+|.|.| .|.+|.++++.|.+. |++|++..|.. ..... .....+ +....+.+.+ +.+++++ .
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 74 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ------GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMP 74 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC------CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCC
Confidence 57899999 699999999999998 99887766532 11111 111122 2211111333 4456777 9
Q ss_pred CeEEEecc
Q 007987 180 DLVLLLIS 187 (582)
Q Consensus 180 DIVILaVP 187 (582)
|+||.+..
T Consensus 75 d~vih~A~ 82 (347)
T 1orr_A 75 DSCFHLAG 82 (347)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 99998765
No 465
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=88.08 E-value=1.3 Score=45.46 Aligned_cols=91 Identities=14% Similarity=0.180 Sum_probs=59.2
Q ss_pred cCCCEEEEEc-cchhHHHHHHHHHH-hhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhhc-----cCC
Q 007987 109 NGINQIGVIG-WGSQGPAQAQNLRD-SLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETIS-----GSD 180 (582)
Q Consensus 109 ~gikkIgIIG-~GsmG~AiA~nLrd-s~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav~-----~AD 180 (582)
.| .+|.|+| .|.+|...++-++. . |.+|++.. .+.+..+.+++.|.... +. -.+..+.+. ..|
T Consensus 171 ~g-~~VlV~Ga~G~vG~~a~qlak~~~------g~~Vi~~~-~~~~~~~~~~~lGad~vi~~-~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AA-PAILIVGGAGGVGSIAVQIARQRT------DLTVIATA-SRPETQEWVKSLGAHHVIDH-SKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SE-EEEEEESTTSHHHHHHHHHHHHHC------CSEEEEEC-SSHHHHHHHHHTTCSEEECT-TSCHHHHHHTTCSCCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHhc------CCEEEEEe-CCHHHHHHHHHcCCCEEEeC-CCCHHHHHHHhcCCCce
Confidence 57 8999999 99999999998886 5 67775544 44455788888886421 11 123333332 579
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+||-++... ..++.....++++-.++..
T Consensus 242 vvid~~g~~---~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 242 FVFSTTHTD---KHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEECSCHH---HHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCCch---hhHHHHHHHhcCCCEEEEE
Confidence 999988743 2345555567776655444
No 466
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=87.96 E-value=1.4 Score=42.68 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=46.4
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCC---HHhhhccCCeEEEecc
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~---~~Eav~~ADIVILaVP 187 (582)
|+|.|+| .|.+|.++++.|.+. .|.+|++..|+.++... ....++....+.+.+ +.++++++|+||.+..
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-----~g~~V~~~~R~~~~~~~-~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 74 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-----HIDHFHIGVRNVEKVPD-DWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPS 74 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-----TCTTEEEEESSGGGSCG-GGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-----CCCcEEEEECCHHHHHH-hhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCC
Confidence 4799999 599999999998864 16778777776443211 122344321122333 4567889999999876
Q ss_pred c
Q 007987 188 D 188 (582)
Q Consensus 188 d 188 (582)
.
T Consensus 75 ~ 75 (289)
T 3e48_A 75 I 75 (289)
T ss_dssp C
T ss_pred C
Confidence 4
No 467
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=87.93 E-value=1.5 Score=47.62 Aligned_cols=72 Identities=11% Similarity=0.111 Sum_probs=49.8
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHc-CceecCCCcCCHH---h-hhccCCeEEEec
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAA-GFTEENGTLGDIY---E-TISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~-G~~~~d~t~~~~~---E-av~~ADIVILaV 186 (582)
++|.|+|+|..|..+++.|.+. |+++++.+. +....+.+.+. |+..--|...+.+ + -+++||.|++ +
T Consensus 128 ~hviI~G~g~~g~~la~~L~~~------~~~vvvid~-~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~-t 199 (565)
T 4gx0_A 128 GHILIFGIDPITRTLIRKLESR------NHLFVVVTD-NYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA-N 199 (565)
T ss_dssp SCEEEESCCHHHHHHHHHTTTT------TCCEEEEES-CHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE-C
T ss_pred CeEEEECCChHHHHHHHHHHHC------CCCEEEEEC-CHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE-e
Confidence 6899999999999999999988 888766554 44556667776 7643222233322 1 2678999988 5
Q ss_pred cchhH
Q 007987 187 SDAAQ 191 (582)
Q Consensus 187 Pd~a~ 191 (582)
+++..
T Consensus 200 ~~D~~ 204 (565)
T 4gx0_A 200 LSDPD 204 (565)
T ss_dssp SCHHH
T ss_pred CCcHH
Confidence 55443
No 468
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=87.90 E-value=0.67 Score=49.45 Aligned_cols=92 Identities=17% Similarity=0.186 Sum_probs=61.8
Q ss_pred cccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCC----cc-----c--HHHHHHcCceecCCCcCCHHh
Q 007987 107 AFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG----SR-----S--FAEARAAGFTEENGTLGDIYE 174 (582)
Q Consensus 107 ~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~----sk-----s--~~~A~~~G~~~~d~t~~~~~E 174 (582)
.++. .||.|+|.|.-|.++|+-|... |. +|++.++++ .+ . ...|..... .....+++|
T Consensus 185 ~l~d-~kVVi~GAGaAG~~iA~ll~~~------Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~~~~---~~~~~~L~e 254 (398)
T 2a9f_A 185 SLDE-VSIVVNGGGSAGLSITRKLLAA------GATKVTVVDKFGIINEQEAAQLAPHHLDIAKVTNR---EFKSGTLED 254 (398)
T ss_dssp CTTS-CEEEEECCSHHHHHHHHHHHHH------TCCEEEEEETTEECCTTCCCSCCC---CHHHHHSC---TTCCCSCSH
T ss_pred CCCc-cEEEEECCCHHHHHHHHHHHHc------CCCeEEEEECCCcccCCccccchHHHHHHhhccCc---ccchhhHHH
Confidence 4455 6999999999999999999988 88 888777652 11 1 122222110 112456899
Q ss_pred hhccCCeEEEeccchhHHHHH-HHHHhcCCCCcEEEEec
Q 007987 175 TISGSDLVLLLISDAAQADNY-EKIFSCMKPNSILGLSH 212 (582)
Q Consensus 175 av~~ADIVILaVPd~a~~~Vl-~eI~~~Lk~GaiL~~a~ 212 (582)
+++++|++|=+..| .++ +++...|+++.+|...+
T Consensus 255 av~~ADV~IG~Sap----gl~T~EmVk~Ma~~pIIfals 289 (398)
T 2a9f_A 255 ALEGADIFIGVSAP----GVLKAEWISKMAARPVIFAMA 289 (398)
T ss_dssp HHHTTCSEEECCST----TCCCHHHHHTSCSSCEEEECC
T ss_pred HhccCCEEEecCCC----CCCCHHHHHhhCCCCEEEECC
Confidence 99999998766543 333 35666788888887544
No 469
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=87.78 E-value=2.5 Score=45.30 Aligned_cols=62 Identities=19% Similarity=0.238 Sum_probs=45.1
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEecc
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVP 187 (582)
|+|.|.| .|.+|.+++..|.+. |++|++..|...+. ..+.. |- .....++++++|+||.+..
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~------G~~V~~l~R~~~~~------~~v~~-d~-~~~~~~~l~~~D~Vih~A~ 210 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTG------GHEVIQLVRKEPKP------GKRFW-DP-LNPASDLLDGADVLVHLAG 210 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEESSSCCT------TCEEC-CT-TSCCTTTTTTCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEECCCCCc------cceee-cc-cchhHHhcCCCCEEEECCC
Confidence 8999999 699999999999998 99988777764431 11221 11 1234567889999998764
No 470
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=87.59 E-value=0.68 Score=47.05 Aligned_cols=75 Identities=16% Similarity=0.092 Sum_probs=48.3
Q ss_pred cccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCC-ceEEEEecCCcccHHHHH-HcCceecCCCcCC---HHhhhccCC
Q 007987 107 AFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEAR-AAGFTEENGTLGD---IYETISGSD 180 (582)
Q Consensus 107 ~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G-~~ViVg~r~~sks~~~A~-~~G~~~~d~t~~~---~~Eav~~AD 180 (582)
.+++ |+|.|.|. |.+|.+++..|.+. | .+|++..|...+..+... ..++....+.+.+ +.+++++.|
T Consensus 29 ~~~~-~~ilVtGatG~iG~~l~~~L~~~------g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d 101 (377)
T 2q1s_A 29 KLAN-TNVMVVGGAGFVGSNLVKRLLEL------GVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYD 101 (377)
T ss_dssp GGTT-CEEEEETTTSHHHHHHHHHHHHT------TCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCS
T ss_pred HhCC-CEEEEECCccHHHHHHHHHHHHc------CCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCC
Confidence 4677 89999995 99999999999998 9 888777665332211110 1232211111333 345677899
Q ss_pred eEEEeccc
Q 007987 181 LVLLLISD 188 (582)
Q Consensus 181 IVILaVPd 188 (582)
+||.+...
T Consensus 102 ~Vih~A~~ 109 (377)
T 2q1s_A 102 YVFHLATY 109 (377)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99987653
No 471
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.56 E-value=0.82 Score=45.76 Aligned_cols=91 Identities=14% Similarity=0.118 Sum_probs=57.2
Q ss_pred cCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhh------ccCC
Q 007987 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (582)
Q Consensus 109 ~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav------~~AD 180 (582)
.| ++|.|+| .|.+|.+.++.++.. |.+|++..++ ....+.+++.|.... |-.-.+..+.+ ...|
T Consensus 140 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------G~~V~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PD-EQFLFHAAAGGVGLIACQWAKAL------GAKLIGTVGT-AQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TT-CEEEESSTTBHHHHHHHHHHHHH------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHHc------CCEEEEEeCC-HHHHHHHHHcCCCEEEECCCccHHHHHHHHhCCCCce
Confidence 46 8999999 799999999999988 8887665554 344566666665310 11111222222 1479
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+||.++... .++...+.++++-.++..
T Consensus 212 ~vi~~~g~~----~~~~~~~~l~~~G~iv~~ 238 (327)
T 1qor_A 212 VVYDSVGRD----TWERSLDCLQRRGLMVSF 238 (327)
T ss_dssp EEEECSCGG----GHHHHHHTEEEEEEEEEC
T ss_pred EEEECCchH----HHHHHHHHhcCCCEEEEE
Confidence 999988743 345555566665554433
No 472
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=87.55 E-value=2 Score=43.64 Aligned_cols=92 Identities=9% Similarity=-0.006 Sum_probs=56.3
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCce-EEEEecCCcccHHHHHHcCceecCCCc-----CCHHhhh------
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIV-VKVGLRKGSRSFAEARAAGFTEENGTL-----GDIYETI------ 176 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~-ViVg~r~~sks~~~A~~~G~~~~d~t~-----~~~~Eav------ 176 (582)
.| .+|.|+|.|.+|...++-++.. |.+ |++.. .+++..+.+++.+-..-+-.. .+..+.+
T Consensus 179 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~-~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 179 LG-DPVLICGAGPIGLITMLCAKAA------GACPLVITD-IDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp TT-CCEEEECCSHHHHHHHHHHHHT------TCCSEEEEE-SCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEEC-CCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCC
Confidence 57 8999999999999999999988 886 55444 344456677665311000000 1112222
Q ss_pred ccCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 177 SGSDLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 177 ~~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
...|+||-++.... .++.....++++-.++..
T Consensus 251 ~g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~ 282 (363)
T 3m6i_A 251 IEPAVALECTGVES---SIAAAIWAVKFGGKVFVI 282 (363)
T ss_dssp CCCSEEEECSCCHH---HHHHHHHHSCTTCEEEEC
T ss_pred CCCCEEEECCCChH---HHHHHHHHhcCCCEEEEE
Confidence 25799999988642 344445566776655443
No 473
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=87.48 E-value=2.7 Score=40.76 Aligned_cols=89 Identities=12% Similarity=0.091 Sum_probs=55.6
Q ss_pred cCCCEEEEEccchhHHHHHHHHH-HhhhhhcCCceEEEEecCCcccHHHHHHc----C----ceecCCCcCCHHhhhccC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKVGLRKGSRSFAEARAA----G----FTEENGTLGDIYETISGS 179 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLr-ds~~~~g~G~~ViVg~r~~sks~~~A~~~----G----~~~~d~t~~~~~Eav~~A 179 (582)
.| .+|.-||||.=+. +..|. .. |.+| ++.+.++...+.|++. | +... ..+..+.-...
T Consensus 64 ~~-~~vLDiGcG~G~~--~~~l~~~~------~~~v-~gvd~s~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~~f 130 (287)
T 1kpg_A 64 PG-MTLLDVGCGWGAT--MMRAVEKY------DVNV-VGLTLSKNQANHVQQLVANSENLRSKRVL---LAGWEQFDEPV 130 (287)
T ss_dssp TT-CEEEEETCTTSHH--HHHHHHHH------CCEE-EEEESCHHHHHHHHHHHHTCCCCSCEEEE---ESCGGGCCCCC
T ss_pred Cc-CEEEEECCcccHH--HHHHHHHc------CCEE-EEEECCHHHHHHHHHHHHhcCCCCCeEEE---ECChhhCCCCe
Confidence 45 7999999998333 33333 44 6655 5666655555555542 2 2210 23444433568
Q ss_pred CeEEEe-----ccchhHHHHHHHHHhcCCCCcEEEE
Q 007987 180 DLVLLL-----ISDAAQADNYEKIFSCMKPNSILGL 210 (582)
Q Consensus 180 DIVILa-----VPd~a~~~Vl~eI~~~Lk~GaiL~~ 210 (582)
|+|+.. +++.....+++++...|+||-.+++
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 166 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLL 166 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEE
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEE
Confidence 999876 4555667889999999999886553
No 474
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=87.46 E-value=0.68 Score=47.26 Aligned_cols=89 Identities=21% Similarity=0.169 Sum_probs=55.7
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHH-HcCceec-CCCcCC---HHhhhccCCeEE
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGTLGD---IYETISGSDLVL 183 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~-~~G~~~~-d~t~~~---~~Eav~~ADIVI 183 (582)
.| .+|.|+|.|.+|...++-++.. |.+|++..++. ...+.++ +.|.... + ..+ ..++....|+||
T Consensus 180 ~g-~~VlV~GaG~vG~~a~qlak~~------Ga~Vi~~~~~~-~~~~~~~~~lGa~~vi~--~~~~~~~~~~~~g~D~vi 249 (357)
T 2cf5_A 180 PG-LRGGILGLGGVGHMGVKIAKAM------GHHVTVISSSN-KKREEALQDLGADDYVI--GSDQAKMSELADSLDYVI 249 (357)
T ss_dssp TT-CEEEEECCSHHHHHHHHHHHHH------TCEEEEEESST-THHHHHHTTSCCSCEEE--TTCHHHHHHSTTTEEEEE
T ss_pred CC-CEEEEECCCHHHHHHHHHHHHC------CCeEEEEeCCh-HHHHHHHHHcCCceeec--cccHHHHHHhcCCCCEEE
Confidence 67 8999999999999999999988 88876655543 3456666 6775310 0 112 122233578888
Q ss_pred EeccchhHHHHHHHHHhcCCCCcEEEE
Q 007987 184 LLISDAAQADNYEKIFSCMKPNSILGL 210 (582)
Q Consensus 184 LaVPd~a~~~Vl~eI~~~Lk~GaiL~~ 210 (582)
-++.... .++.....++++-.++.
T Consensus 250 d~~g~~~---~~~~~~~~l~~~G~iv~ 273 (357)
T 2cf5_A 250 DTVPVHH---ALEPYLSLLKLDGKLIL 273 (357)
T ss_dssp ECCCSCC---CSHHHHTTEEEEEEEEE
T ss_pred ECCCChH---HHHHHHHHhccCCEEEE
Confidence 8887432 12333445566554443
No 475
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=87.45 E-value=0.35 Score=50.92 Aligned_cols=88 Identities=15% Similarity=0.221 Sum_probs=53.1
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCc---eEEEEecC--CcccHHHHHHcCceecCCCcCCH-HhhhccCCeEEE
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDI---VVKVGLRK--GSRSFAEARAAGFTEENGTLGDI-YETISGSDLVLL 184 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~---~ViVg~r~--~sks~~~A~~~G~~~~d~t~~~~-~Eav~~ADIVIL 184 (582)
.||+||| .|..|.-+.+-|.+. ++ ++...... ..+... -.|... .+.+. .+.++++|+||+
T Consensus 3 ~kVaIvGATG~vG~eLlrlL~~~------~~p~~el~~~as~~saG~~~~---~~~~~~---~~~~~~~~~~~~~Dvvf~ 70 (366)
T 3pwk_A 3 YTVAVVGATGAVGAQMIKMLEES------TLPIDKIRYLASARSAGKSLK---FKDQDI---TIEETTETAFEGVDIALF 70 (366)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTC------CCCEEEEEEEECTTTTTCEEE---ETTEEE---EEEECCTTTTTTCSEEEE
T ss_pred cEEEEECCCChHHHHHHHHHhcC------CCCcEEEEEEEccccCCCcce---ecCCCc---eEeeCCHHHhcCCCEEEE
Confidence 5899999 799999999977765 44 33222211 111111 011110 01111 234678999999
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
|+|.....+..+.+. +.|..|++.++-
T Consensus 71 a~~~~~s~~~a~~~~---~~G~~vIDlSa~ 97 (366)
T 3pwk_A 71 SAGSSTSAKYAPYAV---KAGVVVVDNTSY 97 (366)
T ss_dssp CSCHHHHHHHHHHHH---HTTCEEEECSST
T ss_pred CCChHhHHHHHHHHH---HCCCEEEEcCCc
Confidence 999887777776653 468778777663
No 476
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=87.44 E-value=0.38 Score=50.99 Aligned_cols=69 Identities=14% Similarity=0.211 Sum_probs=47.1
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCccc-HHHHHHcCceecCCCcCCHHhhhccCCeEEEec
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRS-FAEARAAGFTEENGTLGDIYETISGSDLVLLLI 186 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks-~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaV 186 (582)
+++ |+|.|||.|..|.+.|+-|.+. |++|++.+.+.... ..... .|+....+. ...+.++.+|+||+..
T Consensus 3 ~~~-~~v~viG~G~~G~~~a~~l~~~------G~~v~~~D~~~~~~~~~~l~-~G~~~~~g~--~~~~~~~~~d~vV~s~ 72 (439)
T 2x5o_A 3 YQG-KNVVIIGLGLTGLSCVDFFLAR------GVTPRVMDTRMTPPGLDKLP-EAVERHTGS--LNDEWLMAADLIVASP 72 (439)
T ss_dssp CTT-CCEEEECCHHHHHHHHHHHHTT------TCCCEEEESSSSCTTGGGSC-TTSCEEESS--CCHHHHHTCSEEEECT
T ss_pred CCC-CEEEEEeecHHHHHHHHHHHhC------CCEEEEEECCCCcchhHHhh-CCCEEEECC--CcHHHhccCCEEEeCC
Confidence 567 8999999999999999999888 99887776543221 11122 576541111 1245666899999863
No 477
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=87.40 E-value=0.37 Score=49.87 Aligned_cols=34 Identities=32% Similarity=0.282 Sum_probs=30.0
Q ss_pred ccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEec
Q 007987 108 FNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLR 148 (582)
Q Consensus 108 l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r 148 (582)
+.| ++|+|||.|..|..+++.+++. |+++++.+.
T Consensus 10 ~~~-~~IlIlG~G~lg~~la~aa~~l------G~~viv~d~ 43 (377)
T 3orq_A 10 KFG-ATIGIIGGGQLGKMMAQSAQKM------GYKVVVLDP 43 (377)
T ss_dssp CTT-CEEEEECCSHHHHHHHHHHHHT------TCEEEEEES
T ss_pred CCC-CEEEEECCCHHHHHHHHHHHHC------CCEEEEEEC
Confidence 456 9999999999999999999998 998877654
No 478
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=87.29 E-value=1.8 Score=42.12 Aligned_cols=44 Identities=9% Similarity=-0.016 Sum_probs=32.9
Q ss_pred cccccccccccCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecC
Q 007987 99 DLFNLLPDAFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (582)
Q Consensus 99 ~~f~~~~~~l~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~ 149 (582)
|-++.....++| |+|.|.| .|-+|.++++.|.+. |.+|++..|+
T Consensus 20 ~~~~~~~~~l~~-k~vlITGasggIG~~la~~L~~~------G~~V~~~~r~ 64 (272)
T 1yb1_A 20 GHMPKRRKSVTG-EIVLITGAGHGIGRLTAYEFAKL------KSKLVLWDIN 64 (272)
T ss_dssp -----CCCCCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEESC
T ss_pred cccCCcccccCC-CEEEEECCCchHHHHHHHHHHHC------CCEEEEEEcC
Confidence 334444556888 9999999 569999999999998 9988777664
No 479
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=87.19 E-value=0.57 Score=48.46 Aligned_cols=89 Identities=16% Similarity=0.114 Sum_probs=51.9
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcC-CceEEEEecCC--cccHHHHHHcCceecCCCcCCH-HhhhccCCeEEEec
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKS-DIVVKVGLRKG--SRSFAEARAAGFTEENGTLGDI-YETISGSDLVLLLI 186 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~-G~~ViVg~r~~--sks~~~A~~~G~~~~d~t~~~~-~Eav~~ADIVILaV 186 (582)
+||+|+| .|.+|..+.+.|.++ ++ .++++...+.. .+... -.|... .+.+. .+..+++|+||+++
T Consensus 7 ~kV~IiGAtG~iG~~llr~L~~~----~~~~~elv~i~s~~~~g~~~~---~~g~~i---~~~~~~~~~~~~~DvV~~a~ 76 (340)
T 2hjs_A 7 LNVAVVGATGSVGEALVGLLDER----DFPLHRLHLLASAESAGQRMG---FAESSL---RVGDVDSFDFSSVGLAFFAA 76 (340)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT----TCCCSCEEEEECTTTTTCEEE---ETTEEE---ECEEGGGCCGGGCSEEEECS
T ss_pred cEEEEECCCCHHHHHHHHHHHhC----CCCcEEEEEEecCCCCCCccc---cCCcce---EEecCCHHHhcCCCEEEEcC
Confidence 6899999 899999999988754 11 23443333221 11110 011111 01111 12357899999999
Q ss_pred cchhHHHHHHHHHhcCCCCcEEEEecC
Q 007987 187 SDAAQADNYEKIFSCMKPNSILGLSHG 213 (582)
Q Consensus 187 Pd~a~~~Vl~eI~~~Lk~GaiL~~a~G 213 (582)
|.....+..+... +.|..+++.++
T Consensus 77 g~~~s~~~a~~~~---~aG~kvId~Sa 100 (340)
T 2hjs_A 77 AAEVSRAHAERAR---AAGCSVIDLSG 100 (340)
T ss_dssp CHHHHHHHHHHHH---HTTCEEEETTC
T ss_pred CcHHHHHHHHHHH---HCCCEEEEeCC
Confidence 9887766666543 45776766655
No 480
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=87.08 E-value=0.99 Score=46.54 Aligned_cols=90 Identities=17% Similarity=0.142 Sum_probs=55.9
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCC-ceEEEEecCCcccHHHHHHcCceec-CCC---cCCHHhhh----c--
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSD-IVVKVGLRKGSRSFAEARAAGFTEE-NGT---LGDIYETI----S-- 177 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G-~~ViVg~r~~sks~~~A~~~G~~~~-d~t---~~~~~Eav----~-- 177 (582)
.| .+|.|+|.|.+|...++-++.. | .+|++..++ .+..+.+++.|.... +.. -.+..+.+ .
T Consensus 195 ~g-~~VlV~GaG~vG~~aiqlak~~------Ga~~Vi~~~~~-~~~~~~~~~lGa~~vi~~~~~~~~~~~~~v~~~~~g~ 266 (380)
T 1vj0_A 195 AG-KTVVIQGAGPLGLFGVVIARSL------GAENVIVIAGS-PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGR 266 (380)
T ss_dssp BT-CEEEEECCSHHHHHHHHHHHHT------TBSEEEEEESC-HHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred CC-CEEEEECcCHHHHHHHHHHHHc------CCceEEEEcCC-HHHHHHHHHcCCcEEEeccccCcchHHHHHHHHhCCC
Confidence 56 8999999999999999999988 8 477665544 445777888886320 100 00111222 1
Q ss_pred cCCeEEEeccchhHHHHHHHHHhcCCCCcEEE
Q 007987 178 GSDLVLLLISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 178 ~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
..|+||-++.... .++...+.++++-.++
T Consensus 267 g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv 295 (380)
T 1vj0_A 267 GADFILEATGDSR---ALLEGSELLRRGGFYS 295 (380)
T ss_dssp CEEEEEECSSCTT---HHHHHHHHEEEEEEEE
T ss_pred CCcEEEECCCCHH---HHHHHHHHHhcCCEEE
Confidence 4799998887432 2334444555554444
No 481
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=86.94 E-value=0.93 Score=45.57 Aligned_cols=91 Identities=20% Similarity=0.262 Sum_probs=57.0
Q ss_pred cCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhh------ccCC
Q 007987 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI------SGSD 180 (582)
Q Consensus 109 ~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav------~~AD 180 (582)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.+++.|.... |-...+..+.+ ...|
T Consensus 145 ~g-~~vlV~Ga~ggiG~~~~~~a~~~------G~~Vi~~~~~-~~~~~~~~~~g~~~~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 145 PG-DYVLIHAAAGGMGHIMVPWARHL------GATVIGTVST-EEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TT-CEEEETTTTSTTHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CC-CEEEEECCccHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHcCCCEEEECCCHHHHHHHHHHhCCCCCe
Confidence 46 89999995 99999999999988 8887666554 334566666664310 11111222222 2478
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+||.++... .++.....++++-.++..
T Consensus 217 ~vi~~~g~~----~~~~~~~~l~~~G~iv~~ 243 (333)
T 1wly_A 217 VVYDSIGKD----TLQKSLDCLRPRGMCAAY 243 (333)
T ss_dssp EEEECSCTT----THHHHHHTEEEEEEEEEC
T ss_pred EEEECCcHH----HHHHHHHhhccCCEEEEE
Confidence 999888763 344555566665554433
No 482
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=86.82 E-value=3.8 Score=41.92 Aligned_cols=93 Identities=15% Similarity=0.155 Sum_probs=59.6
Q ss_pred cCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhh---ccCCeEE
Q 007987 109 NGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI---SGSDLVL 183 (582)
Q Consensus 109 ~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav---~~ADIVI 183 (582)
.| ++|.|+| .|.+|...++-++.. |.+|++.. + ++..+.+++.|.... |..-.+..+.+ ...|+||
T Consensus 183 ~g-~~VlV~Ga~G~vG~~~~qla~~~------Ga~Vi~~~-~-~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 183 TG-KRVLILGASGGVGTFAIQVMKAW------DAHVTAVC-S-QDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp TT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEE-C-GGGHHHHHHTTCSEEEETTSSCHHHHHHTSCCBSEEE
T ss_pred CC-CEEEEECCCCHHHHHHHHHHHhC------CCEEEEEe-C-hHHHHHHHHcCCCEEEECCchHHHHHHhhcCCCCEEE
Confidence 56 8999999 799999999999988 88876544 3 355777888886320 11112232322 2578888
Q ss_pred EeccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 184 LLISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 184 LaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
-++..... .+......++++-.++...
T Consensus 254 d~~g~~~~--~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 254 DNVGGSTE--TWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ESSCTTHH--HHGGGGBCSSSCCEEEESC
T ss_pred ECCCChhh--hhHHHHHhhcCCcEEEEeC
Confidence 88875421 2344555677766555444
No 483
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=86.79 E-value=1.4 Score=45.68 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=31.0
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEec
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLR 148 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r 148 (582)
.+.|++ ++|.|||+|..|..++.+|..+ |+ ++.+.++
T Consensus 113 q~~L~~-~~VlvvG~GglGs~va~~La~a------Gvg~i~lvD~ 150 (353)
T 3h5n_A 113 QDKLKN-AKVVILGCGGIGNHVSVILATS------GIGEIILIDN 150 (353)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEEEC
T ss_pred HHHHhC-CeEEEECCCHHHHHHHHHHHhC------CCCeEEEECC
Confidence 567888 9999999999999999999998 76 5555554
No 484
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=86.74 E-value=0.92 Score=45.67 Aligned_cols=91 Identities=14% Similarity=0.175 Sum_probs=59.2
Q ss_pred cCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHH-HcCceec-CCCc-CCHHhhhc-----cC
Q 007987 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEAR-AAGFTEE-NGTL-GDIYETIS-----GS 179 (582)
Q Consensus 109 ~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~-~~G~~~~-d~t~-~~~~Eav~-----~A 179 (582)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.++ +.|.... |-.- .+..+.++ ..
T Consensus 155 ~g-~~vlI~Ga~g~iG~~~~~~a~~~------G~~V~~~~~~-~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 155 EG-ETVYVSAASGAVGQLVGQLAKMM------GCYVVGSAGS-KEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCE
T ss_pred CC-CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEeCC-HHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCC
Confidence 56 89999997 99999999999988 8887665554 33456666 5675310 1110 12333332 47
Q ss_pred CeEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 180 DLVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 180 DIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
|+||-++... .++.....++++-.++..
T Consensus 227 d~vi~~~g~~----~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 227 DIYFENVGGK----MLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp EEEEESSCHH----HHHHHHTTEEEEEEEEEC
T ss_pred cEEEECCCHH----HHHHHHHHHhcCCEEEEE
Confidence 9999988742 456666677776655544
No 485
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=86.65 E-value=0.7 Score=46.82 Aligned_cols=68 Identities=12% Similarity=0.069 Sum_probs=42.0
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCc-------eEEEEecCCc--ccHHHHH--Hc---CceecCCC-cCCHHhh
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI-------VVKVGLRKGS--RSFAEAR--AA---GFTEENGT-LGDIYET 175 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~-------~ViVg~r~~s--ks~~~A~--~~---G~~~~d~t-~~~~~Ea 175 (582)
+||.|+|. |.+|..++..|... |+ +|++.++... +....+. .. .+.. |-. ..+..++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~------g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~-di~~~~~~~~a 77 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG------EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLA-GLEATDDPKVA 77 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT------TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEE-EEEEESCHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC------CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccC-CeEeccChHHH
Confidence 68999996 99999999999887 64 6655544321 1111111 11 1110 000 1456788
Q ss_pred hccCCeEEEec
Q 007987 176 ISGSDLVLLLI 186 (582)
Q Consensus 176 v~~ADIVILaV 186 (582)
++++|+||.+.
T Consensus 78 ~~~~D~Vih~A 88 (327)
T 1y7t_A 78 FKDADYALLVG 88 (327)
T ss_dssp TTTCSEEEECC
T ss_pred hCCCCEEEECC
Confidence 89999999864
No 486
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.60 E-value=1.4 Score=45.96 Aligned_cols=36 Identities=14% Similarity=0.152 Sum_probs=30.3
Q ss_pred cccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEe
Q 007987 105 PDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGL 147 (582)
Q Consensus 105 ~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~ 147 (582)
.+.|++ ++|.|||+|-.|..++++|... |+ ++.+.+
T Consensus 29 ~~kL~~-~~VlIvGaGGlGs~va~~La~a------GVg~ItlvD 65 (340)
T 3rui_A 29 LDIIKN-TKVLLLGAGTLGCYVSRALIAW------GVRKITFVD 65 (340)
T ss_dssp HHHHHT-CEEEEECCSHHHHHHHHHHHHT------TCCEEEEEC
T ss_pred HHHHhC-CEEEEECCCHHHHHHHHHHHHc------CCCEEEEec
Confidence 357888 9999999999999999999998 76 455544
No 487
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=86.57 E-value=2.8 Score=42.58 Aligned_cols=89 Identities=9% Similarity=0.026 Sum_probs=59.1
Q ss_pred cCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcc---cHHHHHHcCceecCCCcCC--------HHhhh
Q 007987 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSR---SFAEARAAGFTEENGTLGD--------IYETI 176 (582)
Q Consensus 109 ~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sk---s~~~A~~~G~~~~d~t~~~--------~~Eav 176 (582)
.| .+|.|+|. |.+|...++-++.. |.++++..+...+ ..+.+++.|... +.+ ..+..
T Consensus 167 ~g-~~VlV~Ga~G~vG~~aiqlak~~------Ga~vi~~~~~~~~~~~~~~~~~~lGa~~----vi~~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 167 PG-DSVIQNASNSGVGQAVIQIAAAL------GLRTINVVRDRPDIQKLSDRLKSLGAEH----VITEEELRRPEMKNFF 235 (357)
T ss_dssp TT-CEEEESSTTSHHHHHHHHHHHHH------TCEEEEEECCCSCHHHHHHHHHHTTCSE----EEEHHHHHSGGGGGTT
T ss_pred CC-CEEEEeCCcCHHHHHHHHHHHHc------CCEEEEEecCccchHHHHHHHHhcCCcE----EEecCcchHHHHHHHH
Confidence 56 89999998 99999999999888 8877666554332 346777888642 112 12222
Q ss_pred c---cCCeEEEeccchhHHHHHHHHHhcCCCCcEEEEec
Q 007987 177 S---GSDLVLLLISDAAQADNYEKIFSCMKPNSILGLSH 212 (582)
Q Consensus 177 ~---~ADIVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a~ 212 (582)
. ..|+||-++..... .+....++++-.++...
T Consensus 236 ~~~~~~Dvvid~~g~~~~----~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 236 KDMPQPRLALNCVGGKSS----TELLRQLARGGTMVTYG 270 (357)
T ss_dssp SSSCCCSEEEESSCHHHH----HHHHTTSCTTCEEEECC
T ss_pred hCCCCceEEEECCCcHHH----HHHHHhhCCCCEEEEEe
Confidence 2 37999999875433 23456777766655443
No 488
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=86.50 E-value=2.5 Score=45.57 Aligned_cols=93 Identities=10% Similarity=0.106 Sum_probs=64.7
Q ss_pred cccCCCEEEEEccc----------hhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH-cC------------ce
Q 007987 107 AFNGINQIGVIGWG----------SQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA-AG------------FT 163 (582)
Q Consensus 107 ~l~gikkIgIIG~G----------smG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~-~G------------~~ 163 (582)
.++| ++|+|.|+- +-...++..|.+. |.+|.+++..-. +.+.. .| +.
T Consensus 325 ~~~~-~~v~vlGlafK~~~dD~R~Sp~~~i~~~L~~~------g~~v~~~DP~~~---~~~~~~~~~~~~~~~~~~~~~~ 394 (478)
T 2y0c_A 325 DLTG-RTFAIWGLAFKPNTDDMREAPSRELIAELLSR------GARIAAYDPVAQ---EEARRVIALDLADHPSWLERLS 394 (478)
T ss_dssp CCTT-CEEEEECCSSSSSCCCCTTCHHHHHHHHHHHT------TCEEEEECTTTH---HHHHHHHHHHTTTCHHHHTTEE
T ss_pred cCCC-CEEEEEecccCCCCCccccChHHHHHHHHHHC------CCEEEEECCCcc---HHHHHhhcccccccccccccee
Confidence 4678 999999973 3556777777777 888877665422 22221 22 44
Q ss_pred ecCCCcCCHHhhhccCCeEEEeccchhHHH-HHHHHHhcCCCCcEEEEecCc
Q 007987 164 EENGTLGDIYETISGSDLVLLLISDAAQAD-NYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 164 ~~d~t~~~~~Eav~~ADIVILaVPd~a~~~-Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
. +.+..++++++|+|+++|.-..... -++.+...|+. .+|++.-++
T Consensus 395 ~----~~~~~~~~~~ad~~vi~t~~~~f~~~~~~~~~~~~~~-~~i~D~r~~ 441 (478)
T 2y0c_A 395 F----VDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKT-PVIFDGRNL 441 (478)
T ss_dssp E----CSSHHHHTTTCSEEEECSCCGGGGSCCHHHHHTTCSS-CEEEESSCC
T ss_pred e----cCCHHHHHhCCCEEEEecCChHhhccCHHHHHhhcCC-CEEEECCCC
Confidence 2 4578899999999999999887654 34567776764 677887664
No 489
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=86.47 E-value=1.1 Score=48.28 Aligned_cols=32 Identities=25% Similarity=0.451 Sum_probs=28.8
Q ss_pred ccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEE
Q 007987 106 DAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVK 144 (582)
Q Consensus 106 ~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~Vi 144 (582)
..|+| ++|+|.|+|++|...++-|.+. |.+|+
T Consensus 231 ~~l~g-~~vaVqGfGnVG~~~a~~L~e~------GakvV 262 (440)
T 3aog_A 231 LQVEG-ARVAIQGFGNVGNAAARAFHDH------GARVV 262 (440)
T ss_dssp CCSTT-CEEEEECCSHHHHHHHHHHHHT------TCEEE
T ss_pred CCccC-CEEEEeccCHHHHHHHHHHHHC------CCEEE
Confidence 35889 9999999999999999999988 88776
No 490
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=86.18 E-value=1.3 Score=43.51 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=30.2
Q ss_pred ccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCc
Q 007987 108 FNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGS 151 (582)
Q Consensus 108 l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~s 151 (582)
++| |+|.|.|. |-+|.++++.|.+. |++|++..|...
T Consensus 1 m~~-~~vlVtGatG~iG~~l~~~L~~~------G~~V~~~~r~~~ 38 (345)
T 2z1m_A 1 MSG-KRALITGIRGQDGAYLAKLLLEK------GYEVYGADRRSG 38 (345)
T ss_dssp --C-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEECSCCS
T ss_pred CCC-CEEEEECCCChHHHHHHHHHHHC------CCEEEEEECCCc
Confidence 356 89999996 99999999999998 999877776543
No 491
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=86.15 E-value=1.9 Score=41.98 Aligned_cols=90 Identities=18% Similarity=0.180 Sum_probs=59.4
Q ss_pred cCCCEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHH----cCc--eecCCCcCCHHhhh--ccCC
Q 007987 109 NGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARA----AGF--TEENGTLGDIYETI--SGSD 180 (582)
Q Consensus 109 ~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~----~G~--~~~d~t~~~~~Eav--~~AD 180 (582)
.| ++|.-||||. | .++..+.+. |.+| ++.+.++...+.|++ .|+ .. ...+..+.+ ...|
T Consensus 120 ~~-~~VLDiGcG~-G-~l~~~la~~------g~~v-~gvDi~~~~v~~a~~n~~~~~~~v~~---~~~d~~~~~~~~~fD 186 (254)
T 2nxc_A 120 PG-DKVLDLGTGS-G-VLAIAAEKL------GGKA-LGVDIDPMVLPQAEANAKRNGVRPRF---LEGSLEAALPFGPFD 186 (254)
T ss_dssp TT-CEEEEETCTT-S-HHHHHHHHT------TCEE-EEEESCGGGHHHHHHHHHHTTCCCEE---EESCHHHHGGGCCEE
T ss_pred CC-CEEEEecCCC-c-HHHHHHHHh------CCeE-EEEECCHHHHHHHHHHHHHcCCcEEE---EECChhhcCcCCCCC
Confidence 46 8999999999 3 344455555 6654 566666666665554 342 21 123454433 3479
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEEEe
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILGLS 211 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~~a 211 (582)
+|+...+......+++++...|+||..++++
T Consensus 187 ~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 187 LLVANLYAELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp EEEEECCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCcHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 9998777666678888999999998876654
No 492
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=86.13 E-value=0.72 Score=46.28 Aligned_cols=32 Identities=34% Similarity=0.510 Sum_probs=29.4
Q ss_pred CEEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecC
Q 007987 112 NQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (582)
Q Consensus 112 kkIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~ 149 (582)
++|.|||.|.-|.+.|..|.+. |++|.|..+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~------G~~v~v~Er~ 33 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKH------GIKVTIYERN 33 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT------TCEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC------CCCEEEEecC
Confidence 6899999999999999999999 9999888764
No 493
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=86.11 E-value=2.5 Score=40.23 Aligned_cols=87 Identities=15% Similarity=0.035 Sum_probs=52.1
Q ss_pred cccCCCEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEe
Q 007987 107 AFNGINQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLL 185 (582)
Q Consensus 107 ~l~gikkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILa 185 (582)
.++| |+|.|.| .|-+|.++++.|.+. |.+|++..|+..+..+.+.+.+... .. -.+|+
T Consensus 9 ~~~~-k~vlVTGasggiG~~~a~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~---------~~-~~~D~---- 67 (265)
T 2o23_A 9 SVKG-LVAVITGGASGLGLATAERLVGQ------GASAVLLDLPNSGGEAQAKKLGNNC---------VF-APADV---- 67 (265)
T ss_dssp CCTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEEECTTSSHHHHHHHHCTTE---------EE-EECCT----
T ss_pred CCCC-CEEEEECCCChHHHHHHHHHHHC------CCEEEEEeCCcHhHHHHHHHhCCce---------EE-EEcCC----
Confidence 3678 9999999 569999999999998 9998877776544332222211100 00 01222
Q ss_pred ccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 186 ISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 186 VPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
..++...++++++...+.+=.+|+..+|+
T Consensus 68 ~~~~~v~~~~~~~~~~~g~id~li~~Ag~ 96 (265)
T 2o23_A 68 TSEKDVQTALALAKGKFGRVDVAVNCAGI 96 (265)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEECCcc
Confidence 22344556666665544333467777776
No 494
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=86.00 E-value=1.4 Score=43.49 Aligned_cols=69 Identities=17% Similarity=0.120 Sum_probs=45.3
Q ss_pred CEEEEEc-cchhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCC---HHhhhccCCeEEEecc
Q 007987 112 NQIGVIG-WGSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGD---IYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG-~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~---~~Eav~~ADIVILaVP 187 (582)
++|.|.| .|.+|.++++.|.+. |++|++..|...+... ....++....+.+.+ +.+++++.|+||.+..
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~------g~~V~~~~r~~~~~~~-l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~ 86 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAA------GHDLVLIHRPSSQIQR-LAYLEPECRVAEMLDHAGLERALRGLDGVIFSAG 86 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT------TCEEEEEECTTSCGGG-GGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--
T ss_pred CEEEEECCCcHHHHHHHHHHHHC------CCEEEEEecChHhhhh-hccCCeEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 6899999 599999999999998 9988877776443211 111243221112333 4467788999998765
No 495
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=85.99 E-value=0.67 Score=41.29 Aligned_cols=31 Identities=29% Similarity=0.319 Sum_probs=28.2
Q ss_pred EEEEEccchhHHHHHHHHHHhhhhhcCCceEEEEecC
Q 007987 113 QIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKVGLRK 149 (582)
Q Consensus 113 kIgIIG~GsmG~AiA~nLrds~~~~g~G~~ViVg~r~ 149 (582)
.|+|||.|.-|.+.|..|.+. |++|.|..+.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~------G~~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAA------GHQVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHT------TCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC------CCCEEEEECC
Confidence 599999999999999999999 9999887754
No 496
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=85.95 E-value=2.1 Score=44.30 Aligned_cols=89 Identities=12% Similarity=0.083 Sum_probs=54.9
Q ss_pred ccccccCCCEEEEEccchhHHHHHHHHHHhhhhhcCCc-eEEEEecCC-------------------cccH---HHHHHc
Q 007987 104 LPDAFNGINQIGVIGWGSQGPAQAQNLRDSLAEAKSDI-VVKVGLRKG-------------------SRSF---AEARAA 160 (582)
Q Consensus 104 ~~~~l~gikkIgIIG~GsmG~AiA~nLrds~~~~g~G~-~ViVg~r~~-------------------sks~---~~A~~~ 160 (582)
..+.|++ .+|.|||+|..|..++++|..+ |+ .+.+.+... .+.. +...+.
T Consensus 30 ~q~~L~~-~~VlivG~GGlG~~ia~~La~~------Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~l 102 (346)
T 1y8q_A 30 AQKRLRA-SRVLLVGLKGLGAEIAKNLILA------GVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNL 102 (346)
T ss_dssp HHHHHHT-CEEEEECCSHHHHHHHHHHHHH------TCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHT
T ss_pred HHHHHhC-CeEEEECCCHHHHHHHHHHHHc------CCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhH
Confidence 3567788 9999999999999999999998 77 555553210 1111 111111
Q ss_pred --Cceec--CCCc-CCHHhhhccCCeEEEeccchhHHHHHHHHH
Q 007987 161 --GFTEE--NGTL-GDIYETISGSDLVLLLISDAAQADNYEKIF 199 (582)
Q Consensus 161 --G~~~~--d~t~-~~~~Eav~~ADIVILaVPd~a~~~Vl~eI~ 199 (582)
++.+. ...+ ....+.+++.|+||.++-+......+.+..
T Consensus 103 np~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~ 146 (346)
T 1y8q_A 103 NPMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQIC 146 (346)
T ss_dssp CTTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred CCCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHH
Confidence 12110 0001 123567889999999987766655666543
No 497
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=85.88 E-value=1.5 Score=44.68 Aligned_cols=89 Identities=19% Similarity=0.190 Sum_probs=56.2
Q ss_pred cCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceec-CCCcCCHHhhh----c--cCC
Q 007987 109 NGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEE-NGTLGDIYETI----S--GSD 180 (582)
Q Consensus 109 ~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~-d~t~~~~~Eav----~--~AD 180 (582)
.| ++|.|+|. |.+|.+.++.++.. |.+|++..++ ....+.+++.|.... |..-.+..+.+ . ..|
T Consensus 170 ~g-~~vlV~GasggiG~~~~~~a~~~------Ga~Vi~~~~~-~~~~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 170 AG-ESVLVHGASGGVGLAACQIARAY------GLKILGTAGT-EEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp TT-CEEEEETCSSHHHHHHHHHHHHT------TCEEEEEESS-HHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEE
T ss_pred Cc-CEEEEECCCChHHHHHHHHHHHC------CCEEEEEeCC-hhHHHHHHHcCCCEEEeCCCchHHHHHHHHcCCCCcE
Confidence 46 89999998 99999999999988 8887665554 344567777775310 11111222222 1 479
Q ss_pred eEEEeccchhHHHHHHHHHhcCCCCcEEE
Q 007987 181 LVLLLISDAAQADNYEKIFSCMKPNSILG 209 (582)
Q Consensus 181 IVILaVPd~a~~~Vl~eI~~~Lk~GaiL~ 209 (582)
+||.++... .+......++++-.++
T Consensus 242 ~vi~~~G~~----~~~~~~~~l~~~G~iv 266 (351)
T 1yb5_A 242 IIIEMLANV----NLSKDLSLLSHGGRVI 266 (351)
T ss_dssp EEEESCHHH----HHHHHHHHEEEEEEEE
T ss_pred EEEECCChH----HHHHHHHhccCCCEEE
Confidence 999888643 3444455566654444
No 498
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=85.86 E-value=0.37 Score=51.31 Aligned_cols=79 Identities=15% Similarity=0.049 Sum_probs=56.3
Q ss_pred CEEEEEcc-chhHHHHHHHHHHhhhhhcCCc---eEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEEecc
Q 007987 112 NQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI---VVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLLLIS 187 (582)
Q Consensus 112 kkIgIIG~-GsmG~AiA~nLrds~~~~g~G~---~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVILaVP 187 (582)
.+|.|||. |..|..-+.-+..- |. +|.+.+++. ...|-. . +.+.++|+||.++.
T Consensus 215 ~kV~ViG~~G~vG~~A~~~a~~l------Ga~~~~V~v~D~~~-------~~~g~~-----~----~~i~~aDivIn~vl 272 (394)
T 2qrj_A 215 PTVLIIGALGRCGSGAIDLLHKV------GIPDANILKWDIKE-------TSRGGP-----F----DEIPQADIFINCIY 272 (394)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT------TCCGGGEEEECHHH-------HTTCSC-----C----THHHHSSEEEECCC
T ss_pred CeEEEEcCCCHHHHHHHHHHHhC------CCCcCceEEeeccc-------cccCCc-----h----hhHhhCCEEEECcC
Confidence 58999999 99999988888877 86 777765431 112332 1 34679999999998
Q ss_pred chh-HHHHH-HHHHhcC-CCCcEEEEec
Q 007987 188 DAA-QADNY-EKIFSCM-KPNSILGLSH 212 (582)
Q Consensus 188 d~a-~~~Vl-~eI~~~L-k~GaiL~~a~ 212 (582)
-.. .+.++ ++....| |+|.+|+|.+
T Consensus 273 ig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 273 LSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp CCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred cCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 522 22344 4666778 9999999885
No 499
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=85.73 E-value=0.94 Score=49.11 Aligned_cols=75 Identities=15% Similarity=0.119 Sum_probs=39.7
Q ss_pred CEEEEEccchhHHHH--HHHHHHhhhhhcCCceEEEEecCCcccH-------HHHHHcCceecCCCcCCHHhhhccCCeE
Q 007987 112 NQIGVIGWGSQGPAQ--AQNLRDSLAEAKSDIVVKVGLRKGSRSF-------AEARAAGFTEENGTLGDIYETISGSDLV 182 (582)
Q Consensus 112 kkIgIIG~GsmG~Ai--A~nLrds~~~~g~G~~ViVg~r~~sks~-------~~A~~~G~~~~d~t~~~~~Eav~~ADIV 182 (582)
+||+|||.|+.|.+. ...|....+=.+.+.+++..+....+.. ..+...|....-....|.++++++||+|
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~~t~d~~eAl~gAD~V 80 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVVKTESLDEAIEGADFI 80 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEEEESCHHHHHTTCSEE
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEeCCHHHHhCCCCEE
Confidence 589999999988553 3334332110111235554443322211 1122233211001246788999999999
Q ss_pred EEec
Q 007987 183 LLLI 186 (582)
Q Consensus 183 ILaV 186 (582)
|+.+
T Consensus 81 i~~~ 84 (477)
T 3u95_A 81 INTA 84 (477)
T ss_dssp EECC
T ss_pred EECc
Confidence 9986
No 500
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=85.72 E-value=1.8 Score=41.51 Aligned_cols=88 Identities=18% Similarity=0.125 Sum_probs=53.4
Q ss_pred ccccCCCEEEEEcc-chhHHHHHHHHHHhhhhhcCCceEEEEecCCcccHHHHHHcCceecCCCcCCHHhhhccCCeEEE
Q 007987 106 DAFNGINQIGVIGW-GSQGPAQAQNLRDSLAEAKSDIVVKVGLRKGSRSFAEARAAGFTEENGTLGDIYETISGSDLVLL 184 (582)
Q Consensus 106 ~~l~gikkIgIIG~-GsmG~AiA~nLrds~~~~g~G~~ViVg~r~~sks~~~A~~~G~~~~d~t~~~~~Eav~~ADIVIL 184 (582)
+.|+| |++.|.|. |-+|.++++.|.+. |.+|++..++..+..+.+.+.|-.. . .-.+|+
T Consensus 2 ~~l~g-k~vlVTGas~gIG~a~a~~l~~~------G~~V~~~~r~~~~~~~~~~~~~~~~---------~-~~~~Dv--- 61 (247)
T 3rwb_A 2 ERLAG-KTALVTGAAQGIGKAIAARLAAD------GATVIVSDINAEGAKAAAASIGKKA---------R-AIAADI--- 61 (247)
T ss_dssp CTTTT-CEEEEETTTSHHHHHHHHHHHHT------TCEEEEECSCHHHHHHHHHHHCTTE---------E-ECCCCT---
T ss_pred CCcCC-CEEEEECCCCHHHHHHHHHHHHC------CCEEEEEeCCHHHHHHHHHHhCCce---------E-EEEcCC---
Confidence 34788 99999996 68999999999998 9998777665333222222222110 0 112332
Q ss_pred eccchhHHHHHHHHHhcCCCCcEEEEecCc
Q 007987 185 LISDAAQADNYEKIFSCMKPNSILGLSHGF 214 (582)
Q Consensus 185 aVPd~a~~~Vl~eI~~~Lk~GaiL~~a~G~ 214 (582)
+.++...++++++.....+=.+|+..+|+
T Consensus 62 -~~~~~v~~~~~~~~~~~g~id~lv~nAg~ 90 (247)
T 3rwb_A 62 -SDPGSVKALFAEIQALTGGIDILVNNASI 90 (247)
T ss_dssp -TCHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred -CCHHHHHHHHHHHHHHCCCCCEEEECCCC
Confidence 23444556777766554333467777775
Done!