BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007991
(582 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 148/225 (65%), Gaps = 2/225 (0%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
YV+K+I ++R + + R + +E+ +++ +++P IV+Y++S+ E G + I++ YCEGGD+
Sbjct: 52 YVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGS-LYIVMDYCEGGDL 110
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ I GV F E+++ W VQ+ +AL ++H ILHRD+K NIFLT+D ++LGDFG
Sbjct: 111 FKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFG 170
Query: 122 LAKMLISD-DLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDM 180
+A++L S +LA + +GTP Y+ PE+ + PY +KSDIW+LGC +YE+ K AF+A M
Sbjct: 171 IARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM 230
Query: 181 QALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ L+ KI P+ YS R LV + ++NP RPS +L
Sbjct: 231 KNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 128/235 (54%), Gaps = 9/235 (3%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEK-GCYVCIIIGYCEGGDM 61
V K++ T+ ++ E+ L+ +++P IV Y D +++ + I++ YCEGGD+
Sbjct: 35 VWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL 94
Query: 62 AEAIKKANG--VHFPEEKLCKWLVQLLMALNYLH-----ANHILHRDVKCSNIFLTRDQD 114
A I K + EE + + + QL +AL H + +LHRD+K +N+FL Q+
Sbjct: 95 ASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN 154
Query: 115 IRLGDFGLAKMLISD-DLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKA 173
++LGDFGLA++L D D A VGTP YM PE + + Y KSDIWSLGC +YE+ A
Sbjct: 155 VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 174 AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
F AF + L KI + +P YS ++ ML RPS E+L +P
Sbjct: 215 PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 128/235 (54%), Gaps = 9/235 (3%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEK-GCYVCIIIGYCEGGDM 61
V K++ T+ ++ E+ L+ +++P IV Y D +++ + I++ YCEGGD+
Sbjct: 35 VWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL 94
Query: 62 AEAIKKANG--VHFPEEKLCKWLVQLLMALNYLH-----ANHILHRDVKCSNIFLTRDQD 114
A I K + EE + + + QL +AL H + +LHRD+K +N+FL Q+
Sbjct: 95 ASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN 154
Query: 115 IRLGDFGLAKMLISD-DLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKA 173
++LGDFGLA++L D A + VGTP YM PE + + Y KSDIWSLGC +YE+ A
Sbjct: 155 VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 174 AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
F AF + L KI + +P YS ++ ML RPS E+L +P
Sbjct: 215 PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 128/235 (54%), Gaps = 9/235 (3%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEK-GCYVCIIIGYCEGGDM 61
V K++ T+ ++ E+ L+ +++P IV Y D +++ + I++ YCEGGD+
Sbjct: 35 VWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL 94
Query: 62 AEAIKKANG--VHFPEEKLCKWLVQLLMALNYLH-----ANHILHRDVKCSNIFLTRDQD 114
A I K + EE + + + QL +AL H + +LHRD+K +N+FL Q+
Sbjct: 95 ASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN 154
Query: 115 IRLGDFGLAKMLISD-DLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKA 173
++LGDFGLA++L D A + VGTP YM PE + + Y KSDIWSLGC +YE+ A
Sbjct: 155 VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 174 AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
F AF + L KI + +P YS ++ ML RPS E+L +P
Sbjct: 215 PFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 131/225 (58%), Gaps = 8/225 (3%)
Query: 4 LKKIRLARQTD-RARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
LKK+++ D +AR +E++L+ ++ +P +++Y S++E + I++ + GD++
Sbjct: 62 LKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN-ELNIVLELADAGDLS 120
Query: 63 EAIK--KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
IK K PE + K+ VQL AL ++H+ ++HRD+K +N+F+T ++LGD
Sbjct: 121 RMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDL 180
Query: 121 GLAKMLISDDLAS-SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA-- 177
GL + S A+ S+VGTP YM PE + + Y KSDIWSLGC +YEM+A ++ F
Sbjct: 181 GLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 240
Query: 178 FDMQALINKINKSIVAPLPTV-YSGAFRGLVKSMLRKNPEFRPSA 221
++ +L KI + PLP+ YS R LV + +PE RP
Sbjct: 241 MNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDV 285
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 127/216 (58%), Gaps = 14/216 (6%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM-AEAIKKANGVHFPE-EKLCK 80
E+E+++ +P+IV+ ++ G + I+I +C GG + A ++ G+ P+ + +C+
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDG-KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR 124
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL-AKMLISDDLASSVVGTP 139
Q+L ALN+LH+ I+HRD+K N+ +T + DIRL DFG+ AK L + S +GTP
Sbjct: 125 ---QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTP 181
Query: 140 SYMCPEL-----LADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAP 194
+M PE+ + D PY K+DIWSLG + EM+ + + ++ KI KS
Sbjct: 182 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPT 241
Query: 195 L--PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
L P+ +S FR +K L KNPE RPSAA+LL HP
Sbjct: 242 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP 277
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 127/216 (58%), Gaps = 14/216 (6%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM-AEAIKKANGVHFPE-EKLCK 80
E+E+++ +P+IV+ ++ G + I+I +C GG + A ++ G+ P+ + +C+
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDG-KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR 116
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL-AKMLISDDLASSVVGTP 139
Q+L ALN+LH+ I+HRD+K N+ +T + DIRL DFG+ AK L + S +GTP
Sbjct: 117 ---QMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTP 173
Query: 140 SYMCPEL-----LADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAP 194
+M PE+ + D PY K+DIWSLG + EM+ + + ++ KI KS
Sbjct: 174 YWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPT 233
Query: 195 L--PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
L P+ +S FR +K L KNPE RPSAA+LL HP
Sbjct: 234 LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHP 269
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 123/213 (57%), Gaps = 10/213 (4%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH-FPEEKLCK 80
E+++ ++++P I+E + + E YV +++ C G+M +K N V F E +
Sbjct: 60 NEVKIHCQLKHPSILELYN-YFEDSNYVYLVLEMCHNGEMNRYLK--NRVKPFSENEARH 116
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML-ISDDLASSVVGTP 139
++ Q++ + YLH++ ILHRD+ SN+ LTR+ +I++ DFGLA L + + ++ GTP
Sbjct: 117 FMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTP 176
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVA--PLPT 197
+Y+ PE+ +G +SD+WSLGC Y + + FD + N +NK ++A +P+
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRP---PFDTDTVKNTLNKVVLADYEMPS 233
Query: 198 VYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
S + L+ +LR+NP R S + +L HP +
Sbjct: 234 FLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 116/211 (54%), Gaps = 5/211 (2%)
Query: 21 HQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
QE+ ++S+ + ++ +Y S++ KG + II+ Y GG + ++ F E ++
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYL-KGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIAT 124
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTP 139
L ++L L+YLH+ +HRD+K +N+ L+ D++L DFG+A L + ++ VGTP
Sbjct: 125 MLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTP 184
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
+M PE++ Y SK+DIWSLG E++ + ++ I K+ L +
Sbjct: 185 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDF 244
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
+ +F+ + + L K+P FRP+A ELL H +
Sbjct: 245 TKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 112/214 (52%), Gaps = 5/214 (2%)
Query: 21 HQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
QE+ ++S+ +P+I Y S++ K + II+ Y GG + +K E +
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYL-KSTKLWIIMEYLGGGSALDLLKPGP---LEETYIAT 120
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTP 139
L ++L L+YLH+ +HRD+K +N+ L+ D++L DFG+A L + + VGTP
Sbjct: 121 ILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTP 180
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
+M PE++ Y K+DIWSLG E++ + ++ I K+ L +
Sbjct: 181 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQH 240
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
S F+ V++ L K+P FRP+A ELL H + Y
Sbjct: 241 SKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 274
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 5/204 (2%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ + + NP +V + + E +V +++ C + E K+ V PE + ++
Sbjct: 92 EIAIHKSLDNPHVVGFH-GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY--FM 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA-KMLISDDLASSVVGTPSY 141
Q + + YLH N ++HRD+K N+FL D D+++GDFGLA K+ + ++ GTP+Y
Sbjct: 149 RQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNY 208
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE+L + + DIWSLGC +Y + K F+ ++ +I K+ + +P +
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINP 267
Query: 202 AFRGLVKSMLRKNPEFRPSAAELL 225
L++ ML +P RPS AELL
Sbjct: 268 VASALIRRMLHADPTLRPSVAELL 291
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
Query: 21 HQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
QE+ ++S+ +P++ +Y S++ K + II+ Y GG + ++ E ++
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIAT 123
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTP 139
L ++L L+YLH+ +HRD+K +N+ L+ +++L DFG+A L + + VGTP
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTP 183
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
+M PE++ Y SK+DIWSLG E++ + ++ I K+ L Y
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY 243
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCH 227
S + V++ L K P FRP+A ELL H
Sbjct: 244 SKPLKEFVEACLNKEPSFRPTAKELLKH 271
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 5/204 (2%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ + + NP +V + + E +V +++ C + E K+ V PE + ++
Sbjct: 92 EIAIHKSLDNPHVVGFH-GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY--FM 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA-KMLISDDLASSVVGTPSY 141
Q + + YLH N ++HRD+K N+FL D D+++GDFGLA K+ + + GTP+Y
Sbjct: 149 RQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNY 208
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE+L + + DIWSLGC +Y + K F+ ++ +I K+ + +P +
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINP 267
Query: 202 AFRGLVKSMLRKNPEFRPSAAELL 225
L++ ML +P RPS AELL
Sbjct: 268 VASALIRRMLHADPTLRPSVAELL 291
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 112/208 (53%), Gaps = 5/208 (2%)
Query: 21 HQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
QE+ ++S+ +P++ +Y S++ K + II+ Y GG + ++ E ++
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIAT 108
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTP 139
L ++L L+YLH+ +HRD+K +N+ L+ +++L DFG+A L + ++ VGTP
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP 168
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
+M PE++ Y SK+DIWSLG E++ + ++ I K+ L Y
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY 228
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCH 227
S + V++ L K P FRP+A ELL H
Sbjct: 229 SKPLKEFVEACLNKEPSFRPTAKELLKH 256
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 5/204 (2%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ + + NP +V + + E +V +++ C + E K+ V PE + ++
Sbjct: 92 EIAIHKSLDNPHVVGFH-GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY--FM 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA-KMLISDDLASSVVGTPSY 141
Q + + YLH N ++HRD+K N+FL D D+++GDFGLA K+ + + GTP+Y
Sbjct: 149 RQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNY 208
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE+L + + DIWSLGC +Y + K F+ ++ +I K+ + +P +
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINP 267
Query: 202 AFRGLVKSMLRKNPEFRPSAAELL 225
L++ ML +P RPS AELL
Sbjct: 268 VASALIRRMLHADPTLRPSVAELL 291
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 109/204 (53%), Gaps = 5/204 (2%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ + + NP +V + + E +V +++ C + E K+ V PE + ++
Sbjct: 76 EIAIHKSLDNPHVVGFH-GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY--FM 132
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA-KMLISDDLASSVVGTPSY 141
Q + + YLH N ++HRD+K N+FL D D+++GDFGLA K+ + + GTP+Y
Sbjct: 133 RQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNY 192
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE+L + + DIWSLGC +Y + K F+ ++ +I K+ + +P +
Sbjct: 193 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS-VPRHINP 251
Query: 202 AFRGLVKSMLRKNPEFRPSAAELL 225
L++ ML +P RPS AELL
Sbjct: 252 VASALIRRMLHADPTLRPSVAELL 275
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 112/208 (53%), Gaps = 5/208 (2%)
Query: 21 HQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
QE+ ++S+ +P++ +Y S++ K + II+ Y GG + ++ E ++
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIAT 128
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTP 139
L ++L L+YLH+ +HRD+K +N+ L+ +++L DFG+A L + ++ VGTP
Sbjct: 129 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTP 188
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
+M PE++ Y SK+DIWSLG E++ + ++ I K+ L Y
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY 248
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCH 227
S + V++ L K P FRP+A ELL H
Sbjct: 249 SKPLKEFVEACLNKEPSFRPTAKELLKH 276
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
Query: 21 HQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
QE+ ++S+ +P++ +Y S++ K + II+ Y GG + ++ E ++
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYL-KDTKLWIIMEYLGGGSALDLLEPGP---LDETQIAT 108
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTP 139
L ++L L+YLH+ +HRD+K +N+ L+ +++L DFG+A L + + VGTP
Sbjct: 109 ILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTP 168
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
+M PE++ Y SK+DIWSLG E++ + ++ I K+ L Y
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY 228
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCH 227
S + V++ L K P FRP+A ELL H
Sbjct: 229 SKPLKEFVEACLNKEPSFRPTAKELLKH 256
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 112/214 (52%), Gaps = 7/214 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+ ++ + +P +V+Y S+ K + I++ YC G +++ I+ N E+++
Sbjct: 73 KEISIMQQCDSPHVVKYYGSYF-KNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATI 130
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA--SSVVGTP 139
L L L YLH +HRD+K NI L + +L DFG+A L +D +A + V+GTP
Sbjct: 131 LQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGTP 189
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKI--NKSIVAPLPT 197
+M PE++ +I Y +DIWSLG EM+ K + I I N P
Sbjct: 190 FWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPE 249
Query: 198 VYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
++S F VK L K+PE R +A +LL HP ++
Sbjct: 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVR 283
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 117/217 (53%), Gaps = 6/217 (2%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
R +E++++ +P+IV + ++ G + I + + +GG + + +KKA + PE+
Sbjct: 51 RNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGRI--PEQ 107
Query: 77 KLCKWLVQLLMALNYLHANH-ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
L K + ++ L YL H I+HRDVK SNI + +I+L DFG++ LI D++A+
Sbjct: 108 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DEMANEF 166
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
VGT SYM PE L Y +SDIWS+G + EM+ + + L++ I L
Sbjct: 167 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEPPPKL 226
Query: 196 PT-VYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
P+ V+S F+ V L KNP R +L+ H ++
Sbjct: 227 PSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 263
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 128/235 (54%), Gaps = 13/235 (5%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+ +KK+ L +Q + R E+ ++ ++ +VE +S++ G + +++ + EGG
Sbjct: 178 LVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVMEFLEGGA 234
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + + EE++ + +L AL+ LHA ++HRD+K +I LT D ++L DF
Sbjct: 235 LTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 291
Query: 121 GLAKMLISDDLA--SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKA 177
G +S ++ +VGTP +M PEL++ +PYG + DIWSLG V EM + F
Sbjct: 292 GFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 350
Query: 178 FDMQALINKINKSIVAPLPTVY--SGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
++A+ I ++ L ++ S + +G + +L ++P R +AAELL HP L
Sbjct: 351 PPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 117/221 (52%), Gaps = 10/221 (4%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
R +E++++ +P+IV + ++ G + I + + +GG + + +KKA PE+
Sbjct: 67 RNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAG--RIPEQ 123
Query: 77 KLCKWLVQLLMALNYLHANH-ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
L K + ++ L YL H I+HRDVK SNI + +I+L DFG++ LI D +A+S
Sbjct: 124 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSF 182
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVA-- 193
VGT SYM PE L Y +SDIWS+G + EM+ + + I ++ IV
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEP 242
Query: 194 --PLPT-VYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
LP+ V+S F+ V L KNP R +L+ H ++
Sbjct: 243 PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 283
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 130/254 (51%), Gaps = 24/254 (9%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
+KK+ L +Q + R E+ ++ + +V+ S++ G + +++ + EGG + +
Sbjct: 75 VKKMDLRKQ--QRRELLFNEVVIMRDYHHDNVVDMYSSYL-VGDELWVVMEFLEGGALTD 131
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
+ EE++ + +L AL+YLH ++HRD+K +I LT D I+L DFG
Sbjct: 132 IVTHTR---MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFC 188
Query: 124 KMLISDDLA--SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDM 180
+S ++ +VGTP +M PE+++ +PYG++ DIWSLG V EM + F +
Sbjct: 189 AQ-VSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL 247
Query: 181 QALINKINKSI---VAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGI 237
QA+ +I S+ V L V S RG + ML + P R +A ELL HP
Sbjct: 248 QAM-RRIRDSLPPRVKDLHKV-SSVLRGFLDLMLVREPSQRATAQELLGHP--------- 296
Query: 238 HLKLNGPRRNTFPL 251
LKL GP PL
Sbjct: 297 FLKLAGPPSCIVPL 310
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 16/227 (7%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
R +E++++ +P+IV + ++ G + I + + +GG + + +KKA + PE+
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGRI--PEQ 104
Query: 77 KLCKWLVQLLMALNYLHANH-ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
L K + ++ L YL H I+HRDVK SNI + +I+L DFG++ LI D +A+S
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSF 163
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ-------ALINKIN 188
VGT SYM PE L Y +SDIWS+G + EM+ + D + A+ ++
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLD 223
Query: 189 KSIVAPLPTVYSGA----FRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+ P P + SG F+ V L KNP R +L+ H ++
Sbjct: 224 YIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK 270
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 15/239 (6%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEME--LISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEG 58
M VLKK + R A+ +AH + E ++ V++PFIV+ ++ + G + +I+ Y G
Sbjct: 50 MKVLKKAMIVRN---AKDTAHTKAERNILEEVKHPFIVDLIYAF-QTGGKLYLILEYLSG 105
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
G++ +++ G+ F E+ C +L ++ MAL +LH I++RD+K NI L ++L
Sbjct: 106 GELFMQLER-EGI-FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLT 163
Query: 119 DFGLAKMLISDDLAS-SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA 177
DFGL K I D + + GT YM PE+L + D WSLG +Y+M F
Sbjct: 164 DFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
Query: 178 FDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFR-----PSAAELLCHPHLQ 231
+ + I+KI K + LP + R L+K +L++N R A E+ HP +
Sbjct: 224 ENRKKTIDKILKCKLN-LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 128/235 (54%), Gaps = 13/235 (5%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+ +KK+ L +Q + R E+ ++ ++ +VE +S++ G + +++ + EGG
Sbjct: 101 LVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVMEFLEGGA 157
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + + EE++ + +L AL+ LHA ++HRD+K +I LT D ++L DF
Sbjct: 158 LTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 214
Query: 121 GLAKMLISDDLA--SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKA 177
G +S ++ +VGTP +M PEL++ +PYG + DIWSLG V EM + F
Sbjct: 215 GFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 273
Query: 178 FDMQALINKINKSIVAPLPTVY--SGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
++A+ I ++ L ++ S + +G + +L ++P R +AAELL HP L
Sbjct: 274 PPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 116/216 (53%), Gaps = 10/216 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+++++ +P IV+ D++ + + I+I +C GG +A+ E ++
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENN-LWILIEFCAGG-AVDAVMLELERPLTESQIQVVC 141
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL-AKMLISDDLASSVVGTPSY 141
Q L ALNYLH N I+HRD+K NI T D DI+L DFG+ AK + S +GTP +
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYW 201
Query: 142 MCPELLA-----DIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL- 195
M PE++ D PY K+D+WSLG + EM+ + + ++ KI KS L
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA 261
Query: 196 -PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
P+ +S F+ +K L KN + R + ++LL HP +
Sbjct: 262 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 128/235 (54%), Gaps = 13/235 (5%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+ +KK+ L +Q + R E+ ++ ++ +VE +S++ G + +++ + EGG
Sbjct: 58 LVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVMEFLEGGA 114
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + + EE++ + +L AL+ LHA ++HRD+K +I LT D ++L DF
Sbjct: 115 LTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 171
Query: 121 GLAKMLISDDLA--SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKA 177
G +S ++ +VGTP +M PEL++ +PYG + DIWSLG V EM + F
Sbjct: 172 GFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 230
Query: 178 FDMQALINKINKSIVAPLPTVY--SGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
++A+ I ++ L ++ S + +G + +L ++P R +AAELL HP L
Sbjct: 231 PPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 123/239 (51%), Gaps = 15/239 (6%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEME--LISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEG 58
M VLKK + R A+ +AH + E ++ V++PFIV+ ++ + G + +I+ Y G
Sbjct: 50 MKVLKKAMIVRN---AKDTAHTKAERNILEEVKHPFIVDLIYAF-QTGGKLYLILEYLSG 105
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
G++ +++ G+ F E+ C +L ++ MAL +LH I++RD+K NI L ++L
Sbjct: 106 GELFMQLER-EGI-FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLT 163
Query: 119 DFGLAKMLISDDLAS-SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA 177
DFGL K I D + GT YM PE+L + D WSLG +Y+M F
Sbjct: 164 DFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223
Query: 178 FDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFR-----PSAAELLCHPHLQ 231
+ + I+KI K + LP + R L+K +L++N R A E+ HP +
Sbjct: 224 ENRKKTIDKILKCKLN-LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 128/235 (54%), Gaps = 13/235 (5%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+ +KK+ L +Q + R E+ ++ ++ +VE +S++ G + +++ + EGG
Sbjct: 56 LVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVMEFLEGGA 112
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + + EE++ + +L AL+ LHA ++HRD+K +I LT D ++L DF
Sbjct: 113 LTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 169
Query: 121 GLAKMLISDDLA--SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKA 177
G +S ++ +VGTP +M PEL++ +PYG + DIWSLG V EM + F
Sbjct: 170 GFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 228
Query: 178 FDMQALINKINKSIVAPLPTVY--SGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
++A+ I ++ L ++ S + +G + +L ++P R +AAELL HP L
Sbjct: 229 PPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 115/216 (53%), Gaps = 10/216 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+++++ +P IV+ D++ + + I+I +C GG +A+ E ++
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENN-LWILIEFCAGG-AVDAVMLELERPLTESQIQVVC 141
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL-AKMLISDDLASSVVGTPSY 141
Q L ALNYLH N I+HRD+K NI T D DI+L DFG+ AK S +GTP +
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYW 201
Query: 142 MCPELLA-----DIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL- 195
M PE++ D PY K+D+WSLG + EM+ + + ++ KI KS L
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA 261
Query: 196 -PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
P+ +S F+ +K L KN + R + ++LL HP +
Sbjct: 262 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 128/235 (54%), Gaps = 13/235 (5%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+ +KK+ L +Q + R E+ ++ ++ +VE +S++ G + +++ + EGG
Sbjct: 47 LVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVMEFLEGGA 103
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + + EE++ + +L AL+ LHA ++HRD+K +I LT D ++L DF
Sbjct: 104 LTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 160
Query: 121 GLAKMLISDDLA--SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKA 177
G +S ++ +VGTP +M PEL++ +PYG + DIWSLG V EM + F
Sbjct: 161 GFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 219
Query: 178 FDMQALINKINKSIVAPLPTVY--SGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
++A+ I ++ L ++ S + +G + +L ++P R +AAELL HP L
Sbjct: 220 PPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 128/235 (54%), Gaps = 13/235 (5%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+ +KK+ L +Q + R E+ ++ ++ +VE +S++ G + +++ + EGG
Sbjct: 51 LVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYL-VGDELWVVMEFLEGGA 107
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + + EE++ + +L AL+ LHA ++HRD+K +I LT D ++L DF
Sbjct: 108 LTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 164
Query: 121 GLAKMLISDDLA--SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKA 177
G +S ++ +VGTP +M PEL++ +PYG + DIWSLG V EM + F
Sbjct: 165 GFCAQ-VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 223
Query: 178 FDMQALINKINKSIVAPLPTVY--SGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
++A+ I ++ L ++ S + +G + +L ++P R +AAELL HP L
Sbjct: 224 PPLKAM-KMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 115/217 (52%), Gaps = 11/217 (5%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+++++ +P IV+ D++ + + I+I +C GG +A+ E ++
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYEN-NLWILIEFCAGG-AVDAVMLELERPLTESQIQVVC 114
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA--SSVVGTPS 140
Q L ALNYLH N I+HRD+K NI T D DI+L DFG++ + S +GTP
Sbjct: 115 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPY 174
Query: 141 YMCPELLA-----DIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
+M PE++ D PY K+D+WSLG + EM+ + + ++ KI KS L
Sbjct: 175 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL 234
Query: 196 --PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
P+ +S F+ +K L KN + R + ++LL HP +
Sbjct: 235 AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 114/216 (52%), Gaps = 10/216 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+++++ +P IV+ D++ + + I+I +C GG +A+ E ++
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENN-LWILIEFCAGG-AVDAVMLELERPLTESQIQVVC 141
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL-AKMLISDDLASSVVGTPSY 141
Q L ALNYLH N I+HRD+K NI T D DI+L DFG+ AK +GTP +
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYW 201
Query: 142 MCPELLA-----DIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL- 195
M PE++ D PY K+D+WSLG + EM+ + + ++ KI KS L
Sbjct: 202 MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLA 261
Query: 196 -PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
P+ +S F+ +K L KN + R + ++LL HP +
Sbjct: 262 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 5/223 (2%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+Y +K ++ A R R E +++ V +PFIV+ ++ +G + +I+ + GGD
Sbjct: 54 LYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGD 112
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + K V F EE + +L +L +AL++LH+ I++RD+K NI L + I+L DF
Sbjct: 113 LFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 170
Query: 121 GLAKMLIS-DDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
GL+K I + A S GT YM PE++ + +D WS G ++EM F+ D
Sbjct: 171 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230
Query: 180 MQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAA 222
+ + I K+ + +P S + L++ + ++NP R A
Sbjct: 231 RKETMTMILKAKLG-MPQFLSPEAQSLLRMLFKRNPANRLGAG 272
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 41 SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHR 100
+ E +V +++ C + E K+ + PE + +L Q+++ YLH N ++HR
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVIHR 141
Query: 101 DVKCSNIFLTRDQDIRLGDFGLA-KMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIW 159
D+K N+FL D ++++GDFGLA K+ + ++ GTP+Y+ PE+L+ + + D+W
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
Query: 160 SLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRP 219
S+GC +Y + K F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 202 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 260
Query: 220 SAAELL 225
+ ELL
Sbjct: 261 TINELL 266
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 41 SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHR 100
+ E +V +++ C + E K+ + PE + +L Q+++ YLH N ++HR
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVIHR 145
Query: 101 DVKCSNIFLTRDQDIRLGDFGLA-KMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIW 159
D+K N+FL D ++++GDFGLA K+ + ++ GTP+Y+ PE+L+ + + D+W
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 205
Query: 160 SLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRP 219
S+GC +Y + K F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 206 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 264
Query: 220 SAAELL 225
+ ELL
Sbjct: 265 TINELL 270
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 103/186 (55%), Gaps = 4/186 (2%)
Query: 41 SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHR 100
+ E +V +++ C + E K+ + PE + +L Q+++ YLH N ++HR
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVIHR 141
Query: 101 DVKCSNIFLTRDQDIRLGDFGLA-KMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIW 159
D+K N+FL D ++++GDFGLA K+ + ++ GTP+Y+ PE+L+ + + D+W
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
Query: 160 SLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRP 219
S+GC +Y + K F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 202 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 260
Query: 220 SAAELL 225
+ ELL
Sbjct: 261 TINELL 266
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 4/186 (2%)
Query: 41 SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHR 100
+ E +V +++ C + E K+ + PE + +L Q+++ YLH N ++HR
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVIHR 165
Query: 101 DVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVV-GTPSYMCPELLADIPYGSKSDIW 159
D+K N+FL D ++++GDFGLA + D V+ GTP+Y+ PE+L+ + + D+W
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 225
Query: 160 SLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRP 219
S+GC +Y + K F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 226 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 284
Query: 220 SAAELL 225
+ ELL
Sbjct: 285 TINELL 290
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 23/232 (9%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKK--ANGVH----FPE 75
+E++ +S+ +P IV Y S+V K + +++ GG + + IK A G H E
Sbjct: 62 KEIQAMSQCHHPNIVSYYTSFVVKD-ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 120
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS------D 129
+ L ++L L YLH N +HRDVK NI L D +++ DFG++ L + +
Sbjct: 121 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 180
Query: 130 DLASSVVGTPSYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKAAFKAF-DMQALINKI 187
+ + VGTP +M PE++ + Y K+DIWS G E++ A + + M+ L+ +
Sbjct: 181 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL 240
Query: 188 NKSIVAPLPTV--------YSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+ V Y +FR ++ L+K+PE RP+AAELL H Q
Sbjct: 241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 4/186 (2%)
Query: 41 SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHR 100
+ E +V +++ C + E K+ + PE + +L Q+++ YLH N ++HR
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVIHR 163
Query: 101 DVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVV-GTPSYMCPELLADIPYGSKSDIW 159
D+K N+FL D ++++GDFGLA + D V+ GTP+Y+ PE+L+ + + D+W
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 223
Query: 160 SLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRP 219
S+GC +Y + K F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 224 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 282
Query: 220 SAAELL 225
+ ELL
Sbjct: 283 TINELL 288
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 120/228 (52%), Gaps = 9/228 (3%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+Y +K ++ A R R E ++++ V +PF+V+ ++ +G + +I+ + GGD
Sbjct: 58 LYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGD 116
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + K V F EE + +L +L + L++LH+ I++RD+K NI L + I+L DF
Sbjct: 117 LFTRLSKE--VMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 174
Query: 121 GLAKMLIS-DDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
GL+K I + A S GT YM PE++ + +D WS G ++EM F+ D
Sbjct: 175 GLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKD 234
Query: 180 MQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFR----PSAAE 223
+ + I K+ + +P S + L++++ ++NP R P AE
Sbjct: 235 RKETMTLILKAKLG-MPQFLSTEAQSLLRALFKRNPANRLGSGPDGAE 281
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 117/232 (50%), Gaps = 23/232 (9%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKK--ANGVH----FPE 75
+E++ +S+ +P IV Y S+V K + +++ GG + + IK A G H E
Sbjct: 57 KEIQAMSQCHHPNIVSYYTSFVVKD-ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE 115
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS------D 129
+ L ++L L YLH N +HRDVK NI L D +++ DFG++ L + +
Sbjct: 116 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRN 175
Query: 130 DLASSVVGTPSYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKAAFKAF-DMQALINKI 187
+ + VGTP +M PE++ + Y K+DIWS G E++ A + + M+ L+ +
Sbjct: 176 KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL 235
Query: 188 NKSIVAPLPTV--------YSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+ V Y +FR ++ L+K+PE RP+AAELL H Q
Sbjct: 236 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 5/223 (2%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+Y +K ++ A R R E +++ V +PFIV+ ++ +G + +I+ + GGD
Sbjct: 55 LYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGD 113
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + K V F EE + +L +L +AL++LH+ I++RD+K NI L + I+L DF
Sbjct: 114 LFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 171
Query: 121 GLAKMLIS-DDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
GL+K I + A S GT YM PE++ + +D WS G ++EM F+ D
Sbjct: 172 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 231
Query: 180 MQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAA 222
+ + I K+ + +P S + L++ + ++NP R A
Sbjct: 232 RKETMTMILKAKLG-MPQFLSPEAQSLLRMLFKRNPANRLGAG 273
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 5/223 (2%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+Y +K ++ A R R E +++ V +PFIV+ ++ +G + +I+ + GGD
Sbjct: 54 LYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGD 112
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + K V F EE + +L +L +AL++LH+ I++RD+K NI L + I+L DF
Sbjct: 113 LFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 170
Query: 121 GLAKMLIS-DDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
GL+K I + A S GT YM PE++ + +D WS G ++EM F+ D
Sbjct: 171 GLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230
Query: 180 MQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAA 222
+ + I K+ + +P S + L++ + ++NP R A
Sbjct: 231 RKETMTMILKAKLG-MPQFLSPEAQSLLRMLFKRNPANRLGAG 272
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 102/186 (54%), Gaps = 4/186 (2%)
Query: 41 SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHR 100
+ E +V +++ C + E K+ + PE + +L Q+++ YLH N ++HR
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARY--YLRQIVLGCQYLHRNRVIHR 139
Query: 101 DVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVV-GTPSYMCPELLADIPYGSKSDIW 159
D+K N+FL D ++++GDFGLA + D V+ GTP+Y+ PE+L+ + + D+W
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVW 199
Query: 160 SLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRP 219
S+GC +Y + K F+ ++ +I K+ + +P + L++ ML+ +P RP
Sbjct: 200 SIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS-IPKHINPVAASLIQKMLQTDPTARP 258
Query: 220 SAAELL 225
+ ELL
Sbjct: 259 TINELL 264
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 107/212 (50%), Gaps = 7/212 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ ++ +NP IV Y DS++ G + +++ Y GG + + + + +C+
Sbjct: 67 EILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-- 123
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL-AKMLISDDLASSVVGTPSY 141
+ L AL +LH+N ++HRD+K NI L D ++L DFG A++ S++VGTP +
Sbjct: 124 -ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 182
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQAL-INKINKSIVAPLPTVY 199
M PE++ YG K DIWSLG EM + ++AL + N + P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
S FR + L + E R SA ELL H L+
Sbjct: 243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ R+PF+ K ++ + +C ++ Y GG++ + + F EE+ +
Sbjct: 58 ESRVLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYG 114
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTPSY 141
+++ AL YLH+ +++RD+K N+ L +D I++ DFGL K ISD + GTP Y
Sbjct: 115 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEY 174
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE+L D YG D W LG +YEM + F D + L I + P S
Sbjct: 175 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSP 233
Query: 202 AFRGLVKSMLRKNPEFR----PS-AAELLCH 227
+ L+ +L+K+P+ R PS A E++ H
Sbjct: 234 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 264
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 7/212 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ ++ +NP IV Y DS++ G + +++ Y GG + + + + +C+
Sbjct: 67 EILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-- 123
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL-AKMLISDDLASSVVGTPSY 141
+ L AL +LH+N ++HRD+K NI L D ++L DFG A++ S +VGTP +
Sbjct: 124 -ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 182
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQAL-INKINKSIVAPLPTVY 199
M PE++ YG K DIWSLG EM + ++AL + N + P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
S FR + L + E R SA ELL H L+
Sbjct: 243 SAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 91/157 (57%), Gaps = 5/157 (3%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
R +E++++ +P+IV + ++ G + I + + +GG + + +KKA PE+
Sbjct: 110 RNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAG--RIPEQ 166
Query: 77 KLCKWLVQLLMALNYLHANH-ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
L K + ++ L YL H I+HRDVK SNI + +I+L DFG++ LI D +A+S
Sbjct: 167 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSF 225
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQK 172
VGT SYM PE L Y +SDIWS+G + EM+ +
Sbjct: 226 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ R+PF+ K ++ + +C ++ Y GG++ + + F EE+ +
Sbjct: 55 ESRVLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYG 111
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTPSY 141
+++ AL YLH+ +++RD+K N+ L +D I++ DFGL K ISD + GTP Y
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE+L D YG D W LG +YEM + F D + L I + P S
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSP 230
Query: 202 AFRGLVKSMLRKNPEFR----PS-AAELLCH 227
+ L+ +L+K+P+ R PS A E++ H
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 10/211 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ R+PF+ K ++ + +C ++ Y GG++ + + F EE+ +
Sbjct: 55 ESRVLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYG 111
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTPSY 141
+++ AL YLH+ +++RD+K N+ L +D I++ DFGL K ISD + GTP Y
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE+L D YG D W LG +YEM + F D + L I + P S
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSP 230
Query: 202 AFRGLVKSMLRKNPEFR----PS-AAELLCH 227
+ L+ +L+K+P+ R PS A E++ H
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 106/212 (50%), Gaps = 7/212 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ ++ +NP IV Y DS++ G + +++ Y GG + + + + +C+
Sbjct: 67 EILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-- 123
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL-AKMLISDDLASSVVGTPSY 141
+ L AL +LH+N ++HRD+K NI L D ++L DFG A++ S +VGTP +
Sbjct: 124 -ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYW 182
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQAL-INKINKSIVAPLPTVY 199
M PE++ YG K DIWSLG EM + ++AL + N + P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
S FR + L + E R SA ELL H L+
Sbjct: 243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ R+PF+ K ++ + +C ++ Y GG++ + + F EE+ +
Sbjct: 55 ESRVLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYG 111
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTPSY 141
+++ AL YLH+ +++RD+K N+ L +D I++ DFGL K ISD GTP Y
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE+L D YG D W LG +YEM + F D + L I + P S
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSP 230
Query: 202 AFRGLVKSMLRKNPEFR----PS-AAELLCH 227
+ L+ +L+K+P+ R PS A E++ H
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 24/229 (10%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYV-----CIIIGYCEGG--DMA 62
+Q++ + +E+ + ++R+P ++Y+ GCY+ +++ YC G D+
Sbjct: 91 GKQSNEKWQDIIKEVRFLQKLRHPNTIQYR------GCYLREHTAWLVMEYCLGSASDLL 144
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
E KK E ++ L L YLH+++++HRDVK NI L+ ++LGDFG
Sbjct: 145 EVHKKP----LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGS 200
Query: 123 AKMLISDDLASSVVGTPSYMCPELLADIP---YGSKSDIWSLGCCVYEMSAQK-AAFKAF 178
A ++ A+ VGTP +M PE++ + Y K D+WSLG E++ +K F
Sbjct: 201 ASIMAP---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 257
Query: 179 DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
M AL + A +S FR V S L+K P+ RP++ LL H
Sbjct: 258 AMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 7/212 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ ++ +NP IV Y DS++ G + +++ Y GG + + + + +C+
Sbjct: 68 EILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-- 124
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL-AKMLISDDLASSVVGTPSY 141
+ L AL +LH+N ++HRD+K NI L D ++L DFG A++ S +VGTP +
Sbjct: 125 -ECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 183
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQAL-INKINKSIVAPLPTVY 199
M PE++ YG K DIWSLG EM + ++AL + N + P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 243
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
S FR + L + E R SA EL+ H L+
Sbjct: 244 SAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 123/233 (52%), Gaps = 17/233 (7%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
AR+ D A + E+E++ ++ +P I++ K+ + + Y I++ EGG++ + K
Sbjct: 53 AREADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFD---KVV 106
Query: 70 GVHFPEEKLCK-WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKM 125
G +E CK + Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +K+
Sbjct: 107 GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Query: 126 LISDDLASSVVGTPSYMCPELLADI---PYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ- 181
L L ++ GTP+Y+ PE+L + Y D WSLG ++ + F Q
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226
Query: 182 ALINKINKSIVAPLPTVY---SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+L ++I +P V+ S LVK +L +P+ R + E L HP LQ
Sbjct: 227 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
R +E++++ +P+IV + ++ G + I + + +GG + + +KKA + PE+
Sbjct: 75 RNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGRI--PEQ 131
Query: 77 KLCKWLVQLLMALNYLHANH-ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
L K + ++ L YL H I+HRDVK SNI + +I+L DFG++ LI D +A+S
Sbjct: 132 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSF 190
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQK 172
VGT SYM PE L Y +SDIWS+G + EM+ +
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 13/236 (5%)
Query: 10 ARQTDRARRSAHQEMELISRVR-NPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKA 68
A + R + +E++++ +V +P I++ KD++ E + ++ + G++ + + +
Sbjct: 60 AEEVQELREATLKEVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLTEK 118
Query: 69 NGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS 128
V E++ K + LL + LH +I+HRD+K NI L D +I+L DFG + L
Sbjct: 119 --VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 129 DDLASSVVGTPSYMCPELLA-----DIP-YGSKSDIWSLGCCVYEMSAQKAAF---KAFD 179
+ SV GTPSY+ PE++ + P YG + D+WS G +Y + A F K
Sbjct: 177 GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
Query: 180 MQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
M +I N +P YS + LV L P+ R +A E L HP Q YV+
Sbjct: 237 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV 292
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ R+PF+ K ++ + +C ++ Y GG++ + + F EE+ +
Sbjct: 55 ESRVLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYG 111
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTPSY 141
+++ AL YLH+ +++RD+K N+ L +D I++ DFGL K ISD GTP Y
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE+L D YG D W LG +YEM + F D + L I + P S
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSP 230
Query: 202 AFRGLVKSMLRKNPEFR----PS-AAELLCH 227
+ L+ +L+K+P+ R PS A E++ H
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 123/233 (52%), Gaps = 17/233 (7%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
AR+ D A + E+E++ ++ +P I++ K+ + + Y I++ EGG++ + K
Sbjct: 59 AREADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFD---KVV 112
Query: 70 GVHFPEEKLCK-WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKM 125
G +E CK + Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +K+
Sbjct: 113 GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 172
Query: 126 LISDDLASSVVGTPSYMCPELLADI---PYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ- 181
L L ++ GTP+Y+ PE+L + Y D WSLG ++ + F Q
Sbjct: 173 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 232
Query: 182 ALINKINKSIVAPLPTVY---SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+L ++I +P V+ S LVK +L +P+ R + E L HP LQ
Sbjct: 233 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 123/233 (52%), Gaps = 17/233 (7%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
AR+ D A + E+E++ ++ +P I++ K+ + + Y I++ EGG++ + K
Sbjct: 53 AREADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFD---KVV 106
Query: 70 GVHFPEEKLCK-WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKM 125
G +E CK + Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +K+
Sbjct: 107 GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Query: 126 LISDDLASSVVGTPSYMCPELLADI---PYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ- 181
L L ++ GTP+Y+ PE+L + Y D WSLG ++ + F Q
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226
Query: 182 ALINKINKSIVAPLPTVY---SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+L ++I +P V+ S LVK +L +P+ R + E L HP LQ
Sbjct: 227 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 123/233 (52%), Gaps = 17/233 (7%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
AR+ D A + E+E++ ++ +P I++ K+ + + Y I++ EGG++ + K
Sbjct: 53 AREADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFD---KVV 106
Query: 70 GVHFPEEKLCK-WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKM 125
G +E CK + Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +K+
Sbjct: 107 GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
Query: 126 LISDDLASSVVGTPSYMCPELLADI---PYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ- 181
L L ++ GTP+Y+ PE+L + Y D WSLG ++ + F Q
Sbjct: 167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 226
Query: 182 ALINKINKSIVAPLPTVY---SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+L ++I +P V+ S LVK +L +P+ R + E L HP LQ
Sbjct: 227 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 24/229 (10%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYV-----CIIIGYCEGG--DMA 62
+Q++ + +E+ + ++R+P ++Y+ GCY+ +++ YC G D+
Sbjct: 52 GKQSNEKWQDIIKEVRFLQKLRHPNTIQYR------GCYLREHTAWLVMEYCLGSASDLL 105
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
E KK E ++ L L YLH+++++HRDVK NI L+ ++LGDFG
Sbjct: 106 EVHKKP----LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGS 161
Query: 123 AKMLISDDLASSVVGTPSYMCPELLADIP---YGSKSDIWSLGCCVYEMSAQK-AAFKAF 178
A ++ A+ VGTP +M PE++ + Y K D+WSLG E++ +K F
Sbjct: 162 ASIMAP---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 218
Query: 179 DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
M AL + A +S FR V S L+K P+ RP++ LL H
Sbjct: 219 AMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 123/233 (52%), Gaps = 17/233 (7%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
AR+ D A + E+E++ ++ +P I++ K+ + + Y I++ EGG++ + K
Sbjct: 52 AREADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFD---KVV 105
Query: 70 GVHFPEEKLCK-WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKM 125
G +E CK + Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +K+
Sbjct: 106 GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 165
Query: 126 LISDDLASSVVGTPSYMCPELLADI---PYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ- 181
L L ++ GTP+Y+ PE+L + Y D WSLG ++ + F Q
Sbjct: 166 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 225
Query: 182 ALINKINKSIVAPLPTVY---SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+L ++I +P V+ S LVK +L +P+ R + E L HP LQ
Sbjct: 226 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
R +E++++ +P+IV + ++ G + I + + +GG + + +K+A + PEE
Sbjct: 58 RNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKEAKRI--PEE 114
Query: 77 KLCKWLVQLLMALNYLHANH-ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
L K + +L L YL H I+HRDVK SNI + +I+L DFG++ LI D +A+S
Sbjct: 115 ILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSF 173
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQK 172
VGT SYM PE L Y +SDIWS+G + E++ +
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ R+PF+ K ++ + +C ++ Y GG++ + + F EE+ +
Sbjct: 60 ESRVLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYG 116
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTPSY 141
+++ AL YLH+ +++RD+K N+ L +D I++ DFGL K ISD GTP Y
Sbjct: 117 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 176
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE+L D YG D W LG +YEM + F D + L I + P S
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSP 235
Query: 202 AFRGLVKSMLRKNPEFR----PS-AAELLCH 227
+ L+ +L+K+P+ R PS A E++ H
Sbjct: 236 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 266
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
R +E++++ +P+IV + ++ G + I + + +GG + + +KKA + PE+
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGRI--PEQ 104
Query: 77 KLCKWLVQLLMALNYLHANH-ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
L K + ++ L YL H I+HRDVK SNI + +I+L DFG++ LI D +A+S
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSF 163
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQK 172
VGT SYM PE L Y +SDIWS+G + EM+ +
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ R+PF+ K ++ + +C ++ Y GG++ + + F EE+ +
Sbjct: 55 ESRVLQNTRHPFLTALKYAF-QTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYG 111
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTPSY 141
+++ AL YLH+ +++RD+K N+ L +D I++ DFGL K ISD GTP Y
Sbjct: 112 AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE+L D YG D W LG +YEM + F D + L I + P S
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-FPRTLSP 230
Query: 202 AFRGLVKSMLRKNPEFR----PS-AAELLCH 227
+ L+ +L+K+P+ R PS A E++ H
Sbjct: 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
R +E++++ +P+IV + ++ G + I + + +GG + + +KKA + PE+
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGRI--PEQ 104
Query: 77 KLCKWLVQLLMALNYLHANH-ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
L K + ++ L YL H I+HRDVK SNI + +I+L DFG++ LI D +A+S
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSF 163
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQK 172
VGT SYM PE L Y +SDIWS+G + EM+ +
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 123/233 (52%), Gaps = 17/233 (7%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
AR+ D A + E+E++ ++ +P I++ K+ + + Y I++ EGG++ + K
Sbjct: 178 AREADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFD---KVV 231
Query: 70 GVHFPEEKLCK-WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKM 125
G +E CK + Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +K+
Sbjct: 232 GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291
Query: 126 LISDDLASSVVGTPSYMCPELLADI---PYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ- 181
L L ++ GTP+Y+ PE+L + Y D WSLG ++ + F Q
Sbjct: 292 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 351
Query: 182 ALINKINKSIVAPLPTVY---SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+L ++I +P V+ S LVK +L +P+ R + E L HP LQ
Sbjct: 352 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 123/233 (52%), Gaps = 17/233 (7%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
AR+ D A + E+E++ ++ +P I++ K+ + + Y I++ EGG++ + K
Sbjct: 192 AREADPAL-NVETEIEILKKLNHPCIIKIKNFFDAEDYY--IVLELMEGGELFD---KVV 245
Query: 70 GVHFPEEKLCK-WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKM 125
G +E CK + Q+L+A+ YLH N I+HRD+K N+ L+ ++ I++ DFG +K+
Sbjct: 246 GNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 305
Query: 126 LISDDLASSVVGTPSYMCPELLADI---PYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ- 181
L L ++ GTP+Y+ PE+L + Y D WSLG ++ + F Q
Sbjct: 306 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV 365
Query: 182 ALINKINKSIVAPLPTVY---SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+L ++I +P V+ S LVK +L +P+ R + E L HP LQ
Sbjct: 366 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 7/212 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ ++ +NP IV Y DS++ G + +++ Y GG + + + + +C+
Sbjct: 68 EILVMRENKNPNIVNYLDSYL-VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR-- 124
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL-AKMLISDDLASSVVGTPSY 141
+ L AL +LH+N ++HR++K NI L D ++L DFG A++ S++VGTP +
Sbjct: 125 -ECLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 183
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQAL-INKINKSIVAPLPTVY 199
M PE++ YG K DIWSLG EM + ++AL + N + P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 243
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
S FR + L + E R SA EL+ H L+
Sbjct: 244 SAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
R +E++++ +P+IV + ++ G + I + + +GG + + +KKA + PE+
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGRI--PEQ 104
Query: 77 KLCKWLVQLLMALNYLHANH-ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
L K + ++ L YL H I+HRDVK SNI + +I+L DFG++ LI D +A+S
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSF 163
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQK 172
VGT SYM PE L Y +SDIWS+G + EM+ +
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/157 (36%), Positives = 92/157 (58%), Gaps = 5/157 (3%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
R +E++++ +P+IV + ++ G + I + + +GG + + +KKA + PE+
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDG-EISICMEHMDGGSLDQVLKKAGRI--PEQ 104
Query: 77 KLCKWLVQLLMALNYLHANH-ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
L K + ++ L YL H I+HRDVK SNI + +I+L DFG++ LI D +A+S
Sbjct: 105 ILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-DSMANSF 163
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQK 172
VGT SYM PE L Y +SDIWS+G + EM+ +
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 13/236 (5%)
Query: 10 ARQTDRARRSAHQEMELISRVR-NPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKA 68
A + R + +E++++ +V +P I++ KD++ E + ++ + G++ + + +
Sbjct: 60 AEEVQELREATLKEVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLTEK 118
Query: 69 NGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS 128
V E++ K + LL + LH +I+HRD+K NI L D +I+L DFG + L
Sbjct: 119 --VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 129 DDLASSVVGTPSYMCPELLA-----DIP-YGSKSDIWSLGCCVYEMSAQKAAF---KAFD 179
+ V GTPSY+ PE++ + P YG + D+WS G +Y + A F K
Sbjct: 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
Query: 180 MQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
M +I N +P YS + LV L P+ R +A E L HP Q YV+
Sbjct: 237 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVV 292
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 122/245 (49%), Gaps = 32/245 (13%)
Query: 9 LARQTDRARRSAHQEMELISRVRNPF---------------IVEYKDSWVEKGCYVCIII 53
LAR+ R+ A + M+L + R +VE S++ G + +++
Sbjct: 63 LAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL-VGEELWVLM 121
Query: 54 GYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ 113
+ +GG + + + + V EE++ +L AL YLHA ++HRD+K +I LT D
Sbjct: 122 EFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG 178
Query: 114 DIRLGDFGLAKMLISDDL--ASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SA 170
++L DFG IS D+ +VGTP +M PE+++ Y ++ DIWSLG V EM
Sbjct: 179 RVKLSDFGFCAQ-ISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDG 237
Query: 171 QKAAFKAFDMQALINKINKSIVAPLPTV-----YSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ F +QA+ ++ S P P + S R ++ ML ++P+ R +A ELL
Sbjct: 238 EPPYFSDSPVQAM-KRLRDS---PPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELL 293
Query: 226 CHPHL 230
HP L
Sbjct: 294 DHPFL 298
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 8/224 (3%)
Query: 15 RARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANG-VHF 73
R + H+E+ L +++ IV+Y S+ E G ++ I + GG ++ ++ G +
Sbjct: 61 RYSQPLHEEIALHKHLKHKNIVQYLGSFSENG-FIKIFMEQVPGGSLSALLRSKWGPLKD 119
Query: 74 PEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL-TRDQDIRLGDFGLAKMLIS-DDL 131
E+ + + Q+L L YLH N I+HRD+K N+ + T +++ DFG +K L +
Sbjct: 120 NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179
Query: 132 ASSVVGTPSYMCPELLADIP--YGSKSDIWSLGCCVYEMSAQKAAFKAF-DMQALINKIN 188
+ GT YM PE++ P YG +DIWSLGC + EM+ K F + QA + K+
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG 239
Query: 189 KSIVAP-LPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
V P +P S + + +P+ R A +LL L+
Sbjct: 240 MFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKL 78
S E+ ++ ++++P IV D + E G ++ +I+ GG++ + I + + E
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDA 118
Query: 79 CKWLVQLLMALNYLHANHILHRDVKCSNIF---LTRDQDIRLGDFGLAKMLISDDLASSV 135
+ + Q+L A+ YLH I+HRD+K N+ L D I + DFGL+KM + S+
Sbjct: 119 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKS---IV 192
GTP Y+ PE+LA PY D WS+G Y + F + L +I K+
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
+P S + + ++ ++ K+PE R + + L HP +
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 107/207 (51%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G++ + ++K + F E++ +
Sbjct: 62 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPRGEVYKELQKLS--KFDEQRTATY 118
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDY 177
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 236
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHP 263
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 83 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 139
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDY 198
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 257
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 258 GARDLISRLLKHNPSQRPMLREVLEHP 284
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 112/224 (50%), Gaps = 8/224 (3%)
Query: 15 RARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANG-VHF 73
R + H+E+ L +++ IV+Y S+ E G ++ I + GG ++ ++ G +
Sbjct: 47 RYSQPLHEEIALHKHLKHKNIVQYLGSFSENG-FIKIFMEQVPGGSLSALLRSKWGPLKD 105
Query: 74 PEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL-TRDQDIRLGDFGLAKMLIS-DDL 131
E+ + + Q+L L YLH N I+HRD+K N+ + T +++ DFG +K L +
Sbjct: 106 NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 165
Query: 132 ASSVVGTPSYMCPELLADIP--YGSKSDIWSLGCCVYEMSAQKAAFKAF-DMQALINKIN 188
+ GT YM PE++ P YG +DIWSLGC + EM+ K F + QA + K+
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG 225
Query: 189 KSIVAP-LPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
V P +P S + + +P+ R A +LL L+
Sbjct: 226 MFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 11/210 (5%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 83 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 139
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS---DDLASSVVGT 138
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S DDL GT
Sbjct: 140 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GT 195
Query: 139 PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTV 198
Y+ PE++ + K D+WSLG YE K F+A Q +I++ + P
Sbjct: 196 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDF 254
Query: 199 YSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
+ R L+ +L+ NP RP E+L HP
Sbjct: 255 VTEGARDLISRLLKHNPSQRPMLREVLEHP 284
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 94/175 (53%), Gaps = 7/175 (4%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
M VLKK + R + + E ++S V +PFI+ ++ + + +I+ Y EGG+
Sbjct: 36 MKVLKKEIVVRL--KQVEHTNDERLMLSIVTHPFIIRMWGTF-QDAQQIFMIMDYIEGGE 92
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ ++K+ FP + ++ +AL YLH+ I++RD+K NI L ++ I++ DF
Sbjct: 93 LFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDF 150
Query: 121 GLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
G AK + D+ + GTP Y+ PE+++ PY D WS G +YEM A F
Sbjct: 151 GFAKYV--PDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA-EAIKKAN-GVHFPEEKLC 79
+E + +++P IVE +++ G + ++ + +G D+ E +K+A+ G + E
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 133
Query: 80 KWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKMLISDDL-ASSV 135
++ Q+L AL Y H N+I+HRDVK N+ L ++ ++LGDFG+A L L A
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR 193
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
VGTP +M PE++ PYG D+W G ++ + + F + L I K
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 252
Query: 196 PTVYSG---AFRGLVKSMLRKNPEFRPSAAELLCHPHLQP---YVLGIHL 239
P +S + + LV+ ML +P R + E L HP L+ Y IHL
Sbjct: 253 PRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHL 302
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKL 78
S E+ ++ ++++P IV D + E G ++ +I+ GG++ + I + + E
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDA 118
Query: 79 CKWLVQLLMALNYLHANHILHRDVKCSNIF---LTRDQDIRLGDFGLAKMLISDDLASSV 135
+ + Q+L A+ YLH I+HRD+K N+ L D I + DFGL+KM + S+
Sbjct: 119 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKS---IV 192
GTP Y+ PE+LA PY D WS+G Y + F + L +I K+
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
+P S + + ++ ++ K+PE R + + L HP +
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKL 78
S E+ ++ ++++P IV D + E G ++ +I+ GG++ + I + + E
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDA 118
Query: 79 CKWLVQLLMALNYLHANHILHRDVKCSNIF---LTRDQDIRLGDFGLAKMLISDDLASSV 135
+ + Q+L A+ YLH I+HRD+K N+ L D I + DFGL+KM + S+
Sbjct: 119 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKS---IV 192
GTP Y+ PE+LA PY D WS+G Y + F + L +I K+
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
+P S + + ++ ++ K+PE R + + L HP +
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 74 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 130
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 131 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDY 189
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 248
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 249 GARDLISRLLKHNPSQRPMLREVLEHP 275
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 109/218 (50%), Gaps = 9/218 (4%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKL 78
S E+ ++ ++++P IV D + E G ++ +I+ GG++ + I + + E
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIY-ESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDA 118
Query: 79 CKWLVQLLMALNYLHANHILHRDVKCSNIF---LTRDQDIRLGDFGLAKMLISDDLASSV 135
+ + Q+L A+ YLH I+HRD+K N+ L D I + DFGL+KM + S+
Sbjct: 119 SRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA 178
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKS---IV 192
GTP Y+ PE+LA PY D WS+G Y + F + L +I K+
Sbjct: 179 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
+P S + + ++ ++ K+PE R + + L HP +
Sbjct: 239 SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G++ + ++K + F E++ +
Sbjct: 62 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPRGEVYKELQKLS--KFDEQRTATY 118
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S + GT Y
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLXGTLDY 177
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 236
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHP 263
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 117/227 (51%), Gaps = 11/227 (4%)
Query: 1 MYVLKKIRLARQTDRAR-RSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGG 59
MY +K + + +R R+ +E++++ + +PF+V S+ ++ + +++ GG
Sbjct: 42 MYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEED-MFMVVDLLLGG 100
Query: 60 DMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGD 119
D+ +++ VHF EE + ++ +L+MAL+YL I+HRD+K NI L + + D
Sbjct: 101 DLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITD 158
Query: 120 FGLAKMLISDDLASSVVGTPSYMCPELLAD---IPYGSKSDIWSLGCCVYEMSAQKAAF- 175
F +A ML + +++ GT YM PE+ + Y D WSLG YE+ + +
Sbjct: 159 FNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
Query: 176 --KAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPS 220
+ + +++ ++V P+ +S L+K +L NP+ R S
Sbjct: 219 IRSSTSSKEIVHTFETTVVT-YPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%), Gaps = 13/234 (5%)
Query: 10 ARQTDRARRSAHQEMELISRVR-NPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKA 68
A + R + +E++++ +V +P I++ KD++ E + ++ + G++ + + +
Sbjct: 47 AEEVQELREATLKEVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLTEK 105
Query: 69 NGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS 128
V E++ K + LL + LH +I+HRD+K NI L D +I+L DFG + L
Sbjct: 106 --VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 163
Query: 129 DDLASSVVGTPSYMCPELLA-----DIP-YGSKSDIWSLGCCVYEMSAQKAAF---KAFD 179
+ V GTPSY+ PE++ + P YG + D+WS G +Y + A F K
Sbjct: 164 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 223
Query: 180 MQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
M +I N +P YS + LV L P+ R +A E L HP Q Y
Sbjct: 224 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 277
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 137
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+S VG
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 197
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 256
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 257 KFFPKARDLVEKLL 270
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 57 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 113
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDY 172
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 231
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 60 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 116
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S A ++ GT Y
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDY 175
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 234
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 62 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 118
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDY 177
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 236
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHP 263
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 62 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 118
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDY 177
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE + + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 236
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 237 GARDLISRLLKHNPSQRPXLREVLEHP 263
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 60 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 116
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDY 175
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 234
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 57 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 113
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S A ++ GT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDY 172
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 231
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 58 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 114
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR-RTTLSGTLDY 173
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 232
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHP 259
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 122/240 (50%), Gaps = 24/240 (10%)
Query: 4 LKKIRLARQTDRARRSAHQ---EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
L+++ DR++ Q E+E++ + +P I++ + + E + I++ CEGG+
Sbjct: 48 LERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF-EDYHNMYIVMETCEGGE 106
Query: 61 MAEAI--KKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---- 114
+ E I +A G E + + + Q++ AL Y H+ H++H+D+K NI QD
Sbjct: 107 LLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILF---QDTSPH 163
Query: 115 --IRLGDFGLAKMLISDDLASSVVGTPSYMCPELLA-DIPYGSKSDIWSLGCCVYEMSAQ 171
I++ DFGLA++ SD+ +++ GT YM PE+ D+ + K DIWS G +Y +
Sbjct: 164 SPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTF--KCDIWSAGVVMYFLLTG 221
Query: 172 KAAFKAFDMQALINKIN----KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
F ++ + K V P L+K ML K+PE RPSAA++L H
Sbjct: 222 CLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAV--DLLKQMLTKDPERRPSAAQVLHH 279
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 56 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 112
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 113 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDY 171
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 230
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 231 GARDLISRLLKHNPSQRPMLREVLEHP 257
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 61 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 117
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDY 176
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 235
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 236 GARDLISRLLKHNPSQRPMLREVLEHP 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 105/210 (50%), Gaps = 11/210 (5%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 60 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 116
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS---DDLASSVVGT 138
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S DDL GT
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GT 172
Query: 139 PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTV 198
Y+ PE++ + K D+WSLG YE K F+A Q +I++ + P
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDF 231
Query: 199 YSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
+ R L+ +L+ NP RP E+L HP
Sbjct: 232 VTEGARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 60 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 116
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDY 175
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 234
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 57 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 113
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S + + GT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTELCGTLDY 172
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 231
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 62 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 118
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S + + GT Y
Sbjct: 119 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDY 177
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 236
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 237 GARDLISRLLKHNPSQRPMLREVLEHP 263
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 84 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 139
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 140 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 199
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 200 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPA 258
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 259 AFFPKARDLVEKLL 272
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 11/212 (5%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ R+PF+ K S+ + +C ++ Y GG++ + + F E++ +
Sbjct: 201 ENRVLQNSRHPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYG 257
Query: 83 VQLLMALNYLHAN-HILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTPS 140
+++ AL+YLH+ ++++RD+K N+ L +D I++ DFGL K I D + GTP
Sbjct: 258 AEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 317
Query: 141 YMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYS 200
Y+ PE+L D YG D W LG +YEM + F D + L I + P
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-FPRTLG 376
Query: 201 GAFRGLVKSMLRKNPEFR-----PSAAELLCH 227
+ L+ +L+K+P+ R A E++ H
Sbjct: 377 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 408
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 106/212 (50%), Gaps = 11/212 (5%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ R+PF+ K S+ + +C ++ Y GG++ + + F E++ +
Sbjct: 198 ENRVLQNSRHPFLTALKYSF-QTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYG 254
Query: 83 VQLLMALNYLHAN-HILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-SSVVGTPS 140
+++ AL+YLH+ ++++RD+K N+ L +D I++ DFGL K I D + GTP
Sbjct: 255 AEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 314
Query: 141 YMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYS 200
Y+ PE+L D YG D W LG +YEM + F D + L I + P
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-FPRTLG 373
Query: 201 GAFRGLVKSMLRKNPEFR-----PSAAELLCH 227
+ L+ +L+K+P+ R A E++ H
Sbjct: 374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 57 REVEIQSHLRHPNILRLY-GYFHDSTRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 113
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S A ++ GT Y
Sbjct: 114 ITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRA-ALCGTLDY 172
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISR-VEFTFPDFVTE 231
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 58 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 114
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S ++ GT Y
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RDTLCGTLDY 173
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 232
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHP 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 58 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 114
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S + + GT Y
Sbjct: 115 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDY 173
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 232
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 233 GARDLISRLLKHNPSQRPMLREVLEHP 259
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 103/194 (53%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 133
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+S VG
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 193
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 252
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 253 KFFPKARDLVEKLL 266
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 59 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 114
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 115 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 174
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 175 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 233
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 234 KFFPKARDLVEKLL 247
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 57 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 113
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S + + GT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDY 172
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 231
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 54 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 110
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S +++ GT Y
Sbjct: 111 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTTLCGTLDY 169
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 170 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 228
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 229 GARDLISRLLKHNPSQRPMLREVLEHP 255
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 148/340 (43%), Gaps = 40/340 (11%)
Query: 20 AHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLC 79
A E +++ +V + F+V ++ K +C+++ GGD+ I FPE +
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAV 289
Query: 80 KWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP 139
+ ++ L LH I++RD+K NI L IR+ D GLA + VGT
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
YM PE++ + Y D W+LGC +YEM A ++ F+ + ++ + +V +P Y
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER-LVKEVPEEY 408
Query: 200 SGAF----RGLVKSMLRKNPEFR-----PSAAELLCHPHLQPYVLGIHLKLNGPRRNTFP 250
S F R L +L K+P R SA E+ HP + KLN R
Sbjct: 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK--------KLNFKRLGAGM 460
Query: 251 LEWSDSNFKKTRFMEPEAISIHSNREKRQSFSNDRALNPSVSETEQDSLSSTLRGRAFGN 310
LE FK +P+AI + Q FS + + + T+QD G
Sbjct: 461 LE---PPFKP----DPQAIYCKDVLDIEQ-FSTVKGV--ELEPTDQDFYQKFATGSVPIP 510
Query: 311 YMNQK-----FKELSIGVVHEELGVDMSTTPNVCNAGKTP 345
+ N+ F+EL++ G+D S P++ G+ P
Sbjct: 511 WQNEMVETECFQELNV------FGLDGSVPPDLDWKGQPP 544
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 134
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A++ VG
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVG 194
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 253
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 254 KFFPKARDLVEKLL 267
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G + + I+K F E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGCLLKYIRKIGS--FDETCTRF 136
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+S VG
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 196
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 197 TAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 255
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 58 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 113
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 114 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 173
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 174 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 232
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 233 KFFPKARDLVEKLL 246
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 57 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 113
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S + + GT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTXLCGTLDY 172
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 231
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 57 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 113
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S + + GT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTDLCGTLDY 172
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 231
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 57 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 112
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 113 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 172
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 231
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 232 KFFPKARDLVEKLL 245
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 56 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 111
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 112 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 171
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 172 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 230
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 231 KFFPKARDLVEKLL 244
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 134
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 253
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 254 KFFPKARDLVEKLL 267
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 137
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 197
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 198 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 256
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 257 KFFPKARDLVEKLL 270
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 136
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 255
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 148/340 (43%), Gaps = 40/340 (11%)
Query: 20 AHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLC 79
A E +++ +V + F+V ++ K +C+++ GGD+ I FPE +
Sbjct: 231 ALNEKQILEKVNSRFVVSLAYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAV 289
Query: 80 KWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP 139
+ ++ L LH I++RD+K NI L IR+ D GLA + VGT
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTV 349
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
YM PE++ + Y D W+LGC +YEM A ++ F+ + ++ + +V +P Y
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER-LVKEVPEEY 408
Query: 200 SGAF----RGLVKSMLRKNPEFR-----PSAAELLCHPHLQPYVLGIHLKLNGPRRNTFP 250
S F R L +L K+P R SA E+ HP + KLN R
Sbjct: 409 SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK--------KLNFKRLGAGM 460
Query: 251 LEWSDSNFKKTRFMEPEAISIHSNREKRQSFSNDRALNPSVSETEQDSLSSTLRGRAFGN 310
LE FK +P+AI + Q FS + + + T+QD G
Sbjct: 461 LE---PPFKP----DPQAIYCKDVLDIEQ-FSTVKGV--ELEPTDQDFYQKFATGSVPIP 510
Query: 311 YMNQK-----FKELSIGVVHEELGVDMSTTPNVCNAGKTP 345
+ N+ F+EL++ G+D S P++ G+ P
Sbjct: 511 WQNEMVETECFQELNV------FGLDGSVPPDLDWKGQPP 544
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 59 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 115
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S + GT Y
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTLDY 174
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 233
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 234 GARDLISRLLKHNPSQRPMLREVLEHP 260
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 59 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 115
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ +FG + S +++ GT Y
Sbjct: 116 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-RTTLCGTLDY 174
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 233
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 234 GARDLISRLLKHNPSQRPMLREVLEHP 260
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 134
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 253
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 254 KFFPKARDLVEKLL 267
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 136
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 197 TAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-LEYDFPE 255
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 136
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 255
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 126/248 (50%), Gaps = 27/248 (10%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRV---RNPFIVEYKDSWVEKG-----CYVCIIIGY 55
L I++ T QE+ ++ + RN I Y ++++K + +++ +
Sbjct: 51 LAAIKVMDVTGDEEEEIKQEINMLKKYSHHRN--IATYYGAFIKKNPPGMDDQLWLVMEF 108
Query: 56 CEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI 115
C G + + IK G EE + ++L L++LH + ++HRD+K N+ LT + ++
Sbjct: 109 CGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 168
Query: 116 RLGDFGL-AKMLISDDLASSVVGTPSYMCPELLA-----DIPYGSKSDIWSLGCCVYEMS 169
+L DFG+ A++ + ++ +GTP +M PE++A D Y KSD+WSLG EM+
Sbjct: 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
Query: 170 AQKAAFKAFDMQAL--INKINKSIVAPLPTV----YSGAFRGLVKSMLRKNPEFRPSAAE 223
+ A DM + + I ++ P P + +S F+ ++S L KN RP+ +
Sbjct: 229 --EGAPPLCDMHPMRALFLIPRN---PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQ 283
Query: 224 LLCHPHLQ 231
L+ HP ++
Sbjct: 284 LMKHPFIR 291
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 136
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 255
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 134
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 194
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 253
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 254 KFFPKARDLVEKLL 267
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 57 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 113
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S + GT Y
Sbjct: 114 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTLDY 172
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 231
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 232 GARDLISRLLKHNPSQRPMLREVLEHP 258
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 105/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 60 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 116
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ +FG + S +++ GT Y
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR-RTTLCGTLDY 175
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 234
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
M +LKK + + + A E ++ R+PF+ K S+ + +C ++ Y GG+
Sbjct: 40 MKILKKEVIVAKDEVAHTLT--ENRVLQNSRHPFLTALKYSF-QTHDRLCFVMEYANGGE 96
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHAN-HILHRDVKCSNIFLTRDQDIRLGD 119
+ + + F E++ + +++ AL+YLH+ ++++RD+K N+ L +D I++ D
Sbjct: 97 LFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITD 154
Query: 120 FGLAKMLISDDLA-SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
FGL K I D GTP Y+ PE+L D YG D W LG +YEM + F
Sbjct: 155 FGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 214
Query: 179 DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFR-----PSAAELLCH 227
D + L I + P + L+ +L+K+P+ R A E++ H
Sbjct: 215 DHEKLFELILMEEIR-FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 267
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 103/207 (49%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 60 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATY 116
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L ++++ DFG + S + GT Y
Sbjct: 117 ITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RXXLCGTLDY 175
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE K F+A Q +I++ + P +
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR-VEFTFPDFVTE 234
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
R L+ +L+ NP RP E+L HP
Sbjct: 235 GARDLISRLLKHNPSQRPMLREVLEHP 261
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 90/170 (52%), Gaps = 6/170 (3%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
++ + GGD+ I+K+ F E + + +++ AL +LH I++RD+K N+ L
Sbjct: 101 FVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD 158
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVV-GTPSYMCPELLADIPYGSKSDIWSLGCCVYEMS 169
+ +L DFG+ K I + + ++ GTP Y+ PE+L ++ YG D W++G +YEM
Sbjct: 159 HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218
Query: 170 AQKAAFKAFDMQALINKI-NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFR 218
A F+A + L I N +V PT G++KS + KNP R
Sbjct: 219 CGHAPFEAENEDDLFEAILNDEVV--YPTWLHEDATGILKSFMTKNPTMR 266
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 63 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 118
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 119 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 178
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 179 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 237
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 238 KFFPKARDLVEKLL 251
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 10/236 (4%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
Y K I + + R + +E + +++P IV DS E+G + ++ GG++
Sbjct: 32 YAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHY-LVFDLVTGGEL 90
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLG 118
E I ++ E + Q+L ++N+ H N I+HRD+K N+ L ++ ++L
Sbjct: 91 FEDIVARE--YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLA 148
Query: 119 DFGLAKMLISDDLAS-SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA 177
DFGLA + D A GTP Y+ PE+L PYG D+W+ G +Y + F
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 178 FDMQALINKINKSIV---APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
D L +I +P + + L+ ML NP R +A+E L HP +
Sbjct: 209 EDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
M +LKK + + + A E ++ R+PF+ K S+ + +C ++ Y GG+
Sbjct: 39 MKILKKEVIVAKDEVAHTLT--ENRVLQNSRHPFLTALKYSF-QTHDRLCFVMEYANGGE 95
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHAN-HILHRDVKCSNIFLTRDQDIRLGD 119
+ + + F E++ + +++ AL+YLH+ ++++RD+K N+ L +D I++ D
Sbjct: 96 LFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITD 153
Query: 120 FGLAKMLISDDLA-SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
FGL K I D GTP Y+ PE+L D YG D W LG +YEM + F
Sbjct: 154 FGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 213
Query: 179 DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFR-----PSAAELLCH 227
D + L I + P + L+ +L+K+P+ R A E++ H
Sbjct: 214 DHEKLFELILMEEIR-FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 266
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 13/234 (5%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
M +LKK + + + A E ++ R+PF+ K S+ + +C ++ Y GG+
Sbjct: 38 MKILKKEVIVAKDEVAHTLT--ENRVLQNSRHPFLTALKYSF-QTHDRLCFVMEYANGGE 94
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHAN-HILHRDVKCSNIFLTRDQDIRLGD 119
+ + + F E++ + +++ AL+YLH+ ++++RD+K N+ L +D I++ D
Sbjct: 95 LFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITD 152
Query: 120 FGLAKMLISDDLA-SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
FGL K I D GTP Y+ PE+L D YG D W LG +YEM + F
Sbjct: 153 FGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 212
Query: 179 DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFR-----PSAAELLCH 227
D + L I + P + L+ +L+K+P+ R A E++ H
Sbjct: 213 DHEKLFELILMEEIR-FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 265
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 121/276 (43%), Gaps = 35/276 (12%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 37 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 96
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 97 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 153
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 154 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 213
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 214 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 273
Query: 213 KNPEFRPSAAELLCHPHLQPYVLGI-HLKLNGPRRN 247
+P R SA L HP Q + HL+L P R+
Sbjct: 274 YDPNKRISAKAALAHPFFQDVTKPVPHLRLERPHRD 309
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 136
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 196
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 197 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIK-LEYDFPE 255
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 256 KFFPKARDLVEKLL 269
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 93/178 (52%), Gaps = 7/178 (3%)
Query: 50 CIIIG--YCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNI 107
C+ I +C+ G + + I+K G + + Q+ ++Y+H+ ++HRD+K SNI
Sbjct: 108 CLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNI 167
Query: 108 FLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYE 167
FL + +++GDFGL L +D + GT YM PE ++ YG + D+++LG + E
Sbjct: 168 FLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 227
Query: 168 MSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ AF+ + I++ ++ + L++ +L K PE RP+ +E+L
Sbjct: 228 L--LHVCDTAFETSKFFTDLRDGIISD---IFDKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E +++SR+ +PF V+ Y ++ Y + Y + G++ + I+K F E
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGL--SYAKNGELLKYIRKIGS--FDETCTRF 133
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASSVVG 137
+ +++ AL YLH I+HRD+K NI L D I++ DFG AK+L + A+ VG
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 193
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
T Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K + P
Sbjct: 194 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK-LEYDFPE 252
Query: 198 VYSGAFRGLVKSML 211
+ R LV+ +L
Sbjct: 253 KFFPKARDLVEKLL 266
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 118/253 (46%), Gaps = 36/253 (14%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKG-----------CYVC 50
Y +K+IRL + + AR +E++ ++++ +P IV Y ++W+EK Y+
Sbjct: 33 YAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLY 91
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLC-KWLVQLLMALNYLHANHILHRDVKCSNIFL 109
I + C ++ + + + E +C +Q+ A+ +LH+ ++HRD+K SNIF
Sbjct: 92 IQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF 151
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSV-------------VGTPSYMCPELLADIPYGSKS 156
T D +++GDFGL + D+ +V VGT YM PE + Y K
Sbjct: 152 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKV 211
Query: 157 DIWSLGCCVYEM----SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLR 212
DI+SLG ++E+ S Q + + + PL T +V+ ML
Sbjct: 212 DIFSLGLILFELLYPFSTQMERVRT------LTDVRNLKFPPLFTQKYPCEYVMVQDMLS 265
Query: 213 KNPEFRPSAAELL 225
+P RP A ++
Sbjct: 266 PSPMERPEAINII 278
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 23/201 (11%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCII--------IGYCEGGDMAEAIKKANGVHF 73
+E +++SR+ +PF V+ Y C + Y + G++ + I+K F
Sbjct: 86 RERDVMSRLDHPFFVK---------LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS--F 134
Query: 74 PEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD--- 130
E + +++ AL YLH I+HRD+K NI L D I++ DFG AK+L +
Sbjct: 135 DETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 194
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKS 190
A+ VGT Y+ PELL + SD+W+LGC +Y++ A F+A + + KI K
Sbjct: 195 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIK- 253
Query: 191 IVAPLPTVYSGAFRGLVKSML 211
+ P + R LV+ +L
Sbjct: 254 LEYDFPEKFFPKARDLVEKLL 274
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%), Gaps = 12/237 (5%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
V+ K ++ ++TD+ S +E++L+ ++ +P I++ + + +KG + + Y G
Sbjct: 81 VISKRQVKQKTDK--ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 138
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLGD 119
E I + F E + + Q+L + Y+H N I+HRD+K N+ L ++D +IR+ D
Sbjct: 139 EIISRK---RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 195
Query: 120 FGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
FGL+ + +GT Y+ PE+L Y K D+WS G +Y + + F +
Sbjct: 196 FGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 254
Query: 180 MQALINKINK---SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
++ K+ K + P S + + L++ ML P R SA + L H +Q Y
Sbjct: 255 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 311
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%), Gaps = 12/237 (5%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
V+ K ++ ++TD+ S +E++L+ ++ +P I++ + + +KG + + Y G
Sbjct: 82 VISKRQVKQKTDK--ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 139
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLGD 119
E I + F E + + Q+L + Y+H N I+HRD+K N+ L ++D +IR+ D
Sbjct: 140 EIISRK---RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 196
Query: 120 FGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
FGL+ + +GT Y+ PE+L Y K D+WS G +Y + + F +
Sbjct: 197 FGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 255
Query: 180 MQALINKINK---SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
++ K+ K + P S + + L++ ML P R SA + L H +Q Y
Sbjct: 256 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 312
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%), Gaps = 12/237 (5%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
V+ K ++ ++TD+ S +E++L+ ++ +P I++ + + +KG + + Y G
Sbjct: 58 VISKRQVKQKTDK--ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 115
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLGD 119
E I + F E + + Q+L + Y+H N I+HRD+K N+ L ++D +IR+ D
Sbjct: 116 EIISRK---RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 172
Query: 120 FGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
FGL+ + +GT Y+ PE+L Y K D+WS G +Y + + F +
Sbjct: 173 FGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 231
Query: 180 MQALINKINK---SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
++ K+ K + P S + + L++ ML P R SA + L H +Q Y
Sbjct: 232 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 107/210 (50%), Gaps = 5/210 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 61 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--RFDEQRTATY 117
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L + ++++ DFG + S +++ GT Y
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR-RTTLCGTLDY 176
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE F+A Q +I++ + P +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR-VEFTFPDFVTE 235
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
R L+ +L+ N R + AE+L HP ++
Sbjct: 236 GARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 10/236 (4%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
Y K I + + R + +E + +++P IV DS E+G + ++ GG++
Sbjct: 32 YAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHY-LVFDLVTGGEL 90
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLG 118
E I ++ E + Q+L ++N+ H N I+HRD+K N+ L ++ ++L
Sbjct: 91 FEDIVARE--YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLA 148
Query: 119 DFGLAKMLISDDLAS-SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA 177
DFGLA + D A GTP Y+ PE+L PYG D+W+ G +Y + F
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 178 FDMQALINKINKSIV---APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
D L +I +P + + L+ ML NP R +A+E L HP +
Sbjct: 209 EDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
++ Y GGD+ I++ F E + ++ + L +L + I++RD+K N+ L
Sbjct: 419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 476
Query: 111 RDQDIRLGDFGLAKMLISDDLASS-VVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMS 169
+ I++ DFG+ K I D + + GTP Y+ PE++A PYG D W+ G +YEM
Sbjct: 477 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536
Query: 170 AQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNP 215
A +A F+ D L I + VA P S + K ++ K+P
Sbjct: 537 AGQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHP 581
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 33/261 (12%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
+KK+ Q++ + A++E+ L+ +++ ++ D + Y M
Sbjct: 54 IKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT 113
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
++K G+ F EEK+ + Q+L L Y+H+ ++HRD+K N+ + D ++++ DFGLA
Sbjct: 114 DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173
Query: 124 KMLISDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD--- 179
+ +D + V T Y PE +L+ + Y DIWS+GC + EM K FK D
Sbjct: 174 RH--ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231
Query: 180 ----------------MQALINKINKSIVAPLPTVYSGAFR-----------GLVKSMLR 212
+Q L +K KS + LP F L++ ML
Sbjct: 232 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 291
Query: 213 KNPEFRPSAAELLCHPHLQPY 233
+ + R +AA+ L HP +P+
Sbjct: 292 LDVDKRLTAAQALTHPFFEPF 312
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 33/261 (12%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
+KK+ Q++ + A++E+ L+ +++ ++ D + Y M
Sbjct: 72 IKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT 131
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
++K G+ F EEK+ + Q+L L Y+H+ ++HRD+K N+ + D ++++ DFGLA
Sbjct: 132 DLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 191
Query: 124 KMLISDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD--- 179
+ +D + V T Y PE +L+ + Y DIWS+GC + EM K FK D
Sbjct: 192 RH--ADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249
Query: 180 ----------------MQALINKINKSIVAPLPTVYSGAFR-----------GLVKSMLR 212
+Q L +K KS + LP F L++ ML
Sbjct: 250 QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 309
Query: 213 KNPEFRPSAAELLCHPHLQPY 233
+ + R +AA+ L HP +P+
Sbjct: 310 LDVDKRLTAAQALTHPFFEPF 330
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 26/239 (10%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-------------VEKGCY 48
YV+K+++ + A +E++ ++++ + IV Y W +
Sbjct: 39 YVIKRVKYNNE------KAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKT 92
Query: 49 VCIIIG--YCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSN 106
C+ I +C+ G + + I+K G + + Q+ ++Y+H+ +++RD+K SN
Sbjct: 93 KCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSN 152
Query: 107 IFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVY 166
IFL + +++GDFGL L +D GT YM PE ++ YG + D+++LG +
Sbjct: 153 IFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA 212
Query: 167 EMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
E+ AF+ + I++ ++ + L++ +L K PE RP+ +E+L
Sbjct: 213 ELLH--VCDTAFETSKFFTDLRDGIISD---IFDKKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%), Gaps = 12/237 (5%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
V+ K ++ ++TD+ S +E++L+ ++ +P I++ + + +KG + + Y G
Sbjct: 64 VISKRQVKQKTDK--ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD 121
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLGD 119
E I + F E + + Q+L + Y+H N I+HRD+K N+ L ++D +IR+ D
Sbjct: 122 EIISRKR---FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIID 178
Query: 120 FGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
FGL+ + +GT Y+ PE+L Y K D+WS G +Y + + F +
Sbjct: 179 FGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 237
Query: 180 MQALINKINK---SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
++ K+ K + P S + + L++ ML P R SA + L H +Q Y
Sbjct: 238 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 294
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 5/210 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + V +I+ Y G + ++K + F E++ +
Sbjct: 61 REVEIQSHLRHPNILRLY-GYFHDATRVYLILEYAPLGTVYRELQKLS--RFDEQRTATY 117
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H+ ++HRD+K N+ L + ++++ DFG + S ++ GT Y
Sbjct: 118 ITELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR-RDTLCGTLDY 176
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+WSLG YE F+A Q +I++ + P +
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISR-VEFTFPDFVTE 235
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
R L+ +L+ N R + AE+L HP ++
Sbjct: 236 GARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 4/166 (2%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
++ Y GGD+ I++ F E + ++ + L +L + I++RD+K N+ L
Sbjct: 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD 155
Query: 111 RDQDIRLGDFGLAKMLISDDLASS-VVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMS 169
+ I++ DFG+ K I D + + GTP Y+ PE++A PYG D W+ G +YEM
Sbjct: 156 SEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215
Query: 170 AQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNP 215
A +A F+ D L I + VA P S + K ++ K+P
Sbjct: 216 AGQAPFEGEDEDELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHP 260
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 112/230 (48%), Gaps = 13/230 (5%)
Query: 12 QTDRARRSAHQEMELISRVR-NPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANG 70
Q + R + +E ++ +V +P I+ DS+ E ++ ++ G++ + + +
Sbjct: 138 QLEEVREATRRETHILRQVAGHPHIITLIDSY-ESSSFMFLVFDLMRKGELFDYLTEK-- 194
Query: 71 VHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD 130
V E++ + LL A+++LHAN+I+HRD+K NI L + IRL DFG + L +
Sbjct: 195 VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE 254
Query: 131 LASSVVGTPSYMCPELL------ADIPYGSKSDIWSLGCCVYEMSAQKAAF---KAFDMQ 181
+ GTP Y+ PE+L YG + D+W+ G ++ + A F + M
Sbjct: 255 KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILML 314
Query: 182 ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+I + +P S + L+ +L+ +PE R +A + L HP +
Sbjct: 315 RMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 112/227 (49%), Gaps = 15/227 (6%)
Query: 14 DRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
D+++R +E+E++ R ++P I+ KD + + G YV ++ +GG++ + I +
Sbjct: 56 DKSKRDPTEEIEILLRYGQHPNIITLKDVY-DDGKYVYVVTELMKGGELLDKILRQK--F 112
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRD----QDIRLGDFGLAKMLIS 128
F E + L + + YLHA ++HRD+K SNI + + IR+ DFG AK L +
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
Query: 129 DD-LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF------DMQ 181
++ L + T +++ PE+L Y + DIWSLG +Y M F ++
Sbjct: 173 ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEIL 232
Query: 182 ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
A I S+ S + LV ML +P R +AA +L HP
Sbjct: 233 ARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 52/285 (18%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKDSWVEKGCYVCIIIGYCE 57
+Y +K + L ++ S E+ +++++ + I Y ++ Y+ + C
Sbjct: 82 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM---ECG 138
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
D+ +KK + P E+ W +L A++ +H + I+H D+K +N FL D ++L
Sbjct: 139 NIDLNSWLKKKKSID-PWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKL 195
Query: 118 GDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSLGC 163
DFG+A + D + S VGT +YM PE + D+ ++ D+WSLGC
Sbjct: 196 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 255
Query: 164 CVYEMSAQKAAFKAFDMQALINKINK--SIVAP-----LPTVYSGAFRGLVKSMLRKNPE 216
+Y M+ K F Q +IN+I+K +I+ P P + + ++K L+++P+
Sbjct: 256 ILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 310
Query: 217 FRPSAAELLCHPHLQ-----------------PYVLGIHLKLNGP 244
R S ELL HP++Q YVLG + LN P
Sbjct: 311 QRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSP 355
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 14/230 (6%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA-EAIKKAN-GVHFPEEKLC 79
+E + +++P IVE +++ G + ++ + +G D+ E +K+A+ G + E
Sbjct: 77 REASICHMLKHPHIVELLETYSSDG-MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 135
Query: 80 KWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKMLISDDL-ASSV 135
++ Q+L AL Y H N+I+HRDVK + L ++ ++LG FG+A L L A
Sbjct: 136 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR 195
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
VGTP +M PE++ PYG D+W G ++ + + F + L I K
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 254
Query: 196 PTVYSG---AFRGLVKSMLRKNPEFRPSAAELLCHPHLQP---YVLGIHL 239
P +S + + LV+ ML +P R + E L HP L+ Y IHL
Sbjct: 255 PRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHL 304
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 104/212 (49%), Gaps = 27/212 (12%)
Query: 32 NPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNY 91
+PF+V S + + +I Y GGD+ +++ + PEE + ++ +ALNY
Sbjct: 112 HPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKL--PEEHARFYSAEISLALNY 168
Query: 92 LHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKM-LISDDLASSVVGTPSYMCPELLADI 150
LH I++RD+K N+ L + I+L D+G+ K L D S+ GTP+Y+ PE+L
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 151 PYGSKSDIWSLGCCVYEMSAQKAAF-------------KAFDMQALINKINKSIVAPLPT 197
YG D W+LG ++EM A ++ F + + Q ++ K + +P
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-----IPR 283
Query: 198 VYSGAFRGLVKSMLRKNPEFRPSAAELLCHPH 229
S ++KS L K+P+ R L CHP
Sbjct: 284 SLSVKAASVLKSFLNKDPKER-----LGCHPQ 310
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + + D
Sbjct: 33 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFM 92
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 93 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 149
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 150 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 210 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 270 YDPNKRISAKAALAHPFFQ 288
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 114/230 (49%), Gaps = 14/230 (6%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA-EAIKKAN-GVHFPEEKLC 79
+E + +++P IVE +++ G + ++ + +G D+ E +K+A+ G + E
Sbjct: 75 REASICHMLKHPHIVELLETYSSDGM-LYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 133
Query: 80 KWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKMLISDDL-ASSV 135
++ Q+L AL Y H N+I+HRDVK + L ++ ++LG FG+A L L A
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGR 193
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
VGTP +M PE++ PYG D+W G ++ + + F + L I K
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 252
Query: 196 PTVYSG---AFRGLVKSMLRKNPEFRPSAAELLCHPHLQP---YVLGIHL 239
P +S + + LV+ ML +P R + E L HP L+ Y IHL
Sbjct: 253 PRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHL 302
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + D
Sbjct: 36 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFM 95
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 96 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 153 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 213 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 272
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 273 YDPNKRISAKAALAHPFFQ 291
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 113/239 (47%), Gaps = 8/239 (3%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRN-PFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
Y K ++ R+ R E+ ++ ++ P ++ + + E + +I+ Y GG+
Sbjct: 57 YAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY-ENTSEIILILEYAAGGE 115
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ---DIRL 117
+ E + + + Q+L + YLH N+I+H D+K NI L+ DI++
Sbjct: 116 IFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKI 175
Query: 118 GDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA 177
DFG+++ + ++GTP Y+ PE+L P + +D+W++G Y + + F
Sbjct: 176 VDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVG 235
Query: 178 FDMQAL---INKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
D Q I+++N + S ++S+L KNPE RP+A L H LQ +
Sbjct: 236 EDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + D
Sbjct: 35 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFM 94
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 95 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 151
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 152 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 212 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 271
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 272 YDPNKRISAKAALAHPFFQ 290
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
Y +K I A ++ + +E+EL+ ++ +P I++ + + + + Y G
Sbjct: 50 YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLG 118
E IK+ F E + + Q+ + Y+H ++I+HRD+K NI L +D DI++
Sbjct: 110 DEIIKRK---RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKII 166
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGL+ + +GT Y+ PE+L Y K D+WS G +Y + + F
Sbjct: 167 DFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK 225
Query: 179 DMQALINKINKSIVA---PLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
+ ++ ++ A P S + L++ ML +P R +A + L HP +Q Y
Sbjct: 226 NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 40 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 99
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 100 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 156
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 157 ARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 216
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 217 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 276
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 277 YDPNKRISAKAALAHPFFQ 295
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 52/285 (18%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKDSWVEKGCYVCIIIGYCE 57
+Y +K + L ++ S E+ +++++ + I Y ++ Y+ + C
Sbjct: 35 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM---ECG 91
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
D+ +KK + P E+ W +L A++ +H + I+H D+K +N FL D ++L
Sbjct: 92 NIDLNSWLKKKKSID-PWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKL 148
Query: 118 GDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSLGC 163
DFG+A + D + S VGT +YM PE + D+ ++ D+WSLGC
Sbjct: 149 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 208
Query: 164 CVYEMSAQKAAFKAFDMQALINKINK--SIVAP-----LPTVYSGAFRGLVKSMLRKNPE 216
+Y M+ K F Q +IN+I+K +I+ P P + + ++K L+++P+
Sbjct: 209 ILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 263
Query: 217 FRPSAAELLCHPHLQ-----------------PYVLGIHLKLNGP 244
R S ELL HP++Q YVLG + LN P
Sbjct: 264 QRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSP 308
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 122/244 (50%), Gaps = 17/244 (6%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRN-PFIVEYKDSWVEKG-CYVCIIIGYCEGGDM 61
+K+IR + ++ ++ +++++ R + P+IV++ + +G C++C+ +
Sbjct: 52 VKRIR-STVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKF 110
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHAN-HILHRDVKCSNIFLTRDQDIRLGDF 120
+ + PEE L K + + ALN+L N I+HRD+K SNI L R +I+L DF
Sbjct: 111 YKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDF 170
Query: 121 GLAKMLISDDLASSVVGTPSYMCPELL----ADIPYGSKSDIWSLGCCVYEMSAQKAAFK 176
G++ L+ + G YM PE + + Y +SD+WSLG +YE++ + +
Sbjct: 171 GISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP 230
Query: 177 AFDMQALINKINKSIVAPLPTV-------YSGAFRGLVKSMLRKNPEFRPSAAELLCHPH 229
++ ++ +++ + + P + +S +F V L K+ RP ELL HP
Sbjct: 231 KWN--SVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPF 288
Query: 230 LQPY 233
+ Y
Sbjct: 289 ILMY 292
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIII 53
+ L D ++R ++E+ +++PFI+ Y++ VE CYVC I+
Sbjct: 266 VNLCLTKDESKRPKYKEL-----LKHPFILMYEERAVEVACYVCKIL 307
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 33 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 92
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L++ H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 93 DA-SALTGIPLPLIK--SYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 150 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 210 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 270 YDPNKRISAKAALAHPFFQ 288
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 108/234 (46%), Gaps = 10/234 (4%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
Y K I + + R + +E + +++P IV DS E+G + ++ GG++
Sbjct: 59 YAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHY-LVFDLVTGGEL 117
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT---RDQDIRLG 118
E I ++ E + Q+L ++N++H + I+HRD+K N+ L + ++L
Sbjct: 118 FEDIVARE--YYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLA 175
Query: 119 DFGLAKMLISDDLAS-SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA 177
DFGLA + + A GTP Y+ PE+L PYG DIW+ G +Y + F
Sbjct: 176 DFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWD 235
Query: 178 FDMQALINKINKSIV---APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
D L +I +P + + L+ ML NP R +A + L HP
Sbjct: 236 EDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHP 289
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 33 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 92
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 93 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 150 ARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 210 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 270 YDPNKRISAKAALAHPFFQ 288
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 99/195 (50%), Gaps = 32/195 (16%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYV------------ 49
Y +KKIR T+ + E+ L++ + + ++V Y +W+E+ +V
Sbjct: 34 YAIKKIR---HTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTL 90
Query: 50 CIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
I + YCE G + + I N ++ ++ + Q+L AL+Y+H+ I+HRD+K NIF+
Sbjct: 91 FIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 149
Query: 110 TRDQDIRLGDFGLAKMLI---------------SDDLASSVVGTPSYMCPELLADIP-YG 153
+++++GDFGLAK + S D +S +GT Y+ E+L Y
Sbjct: 150 DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN 209
Query: 154 SKSDIWSLGCCVYEM 168
K D++SLG +EM
Sbjct: 210 EKIDMYSLGIIFFEM 224
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 134/285 (47%), Gaps = 52/285 (18%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKDSWVEKGCYVCIIIGYCE 57
+Y +K + L ++ S E+ +++++ + I Y ++ Y+ + C
Sbjct: 38 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM---ECG 94
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
D+ +KK + P E+ W +L A++ +H + I+H D+K +N FL D ++L
Sbjct: 95 NIDLNSWLKKKKSID-PWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKL 151
Query: 118 GDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSLGC 163
DFG+A + D + S VGT +YM PE + D+ ++ D+WSLGC
Sbjct: 152 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 211
Query: 164 CVYEMSAQKAAFKAFDMQALINKINK--SIVAP-----LPTVYSGAFRGLVKSMLRKNPE 216
+Y M+ K F Q +IN+I+K +I+ P P + + ++K L+++P+
Sbjct: 212 ILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 266
Query: 217 FRPSAAELLCHPHLQ-----------------PYVLGIHLKLNGP 244
R S ELL HP++Q YVLG + LN P
Sbjct: 267 QRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSP 311
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 32 NPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNY 91
+PF+V S + + +I Y GGD+ +++ + PEE + ++ +ALNY
Sbjct: 65 HPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKL--PEEHARFYSAEISLALNY 121
Query: 92 LHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKM-LISDDLASSVVGTPSYMCPELLADI 150
LH I++RD+K N+ L + I+L D+G+ K L D S GTP+Y+ PE+L
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 151 PYGSKSDIWSLGCCVYEMSAQKAAF-------------KAFDMQALINKINKSIVAPLPT 197
YG D W+LG ++EM A ++ F + + Q ++ K + +P
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-----IPR 236
Query: 198 VYSGAFRGLVKSMLRKNPEFRPSAAELLCHPH 229
S ++KS L K+P+ R L CHP
Sbjct: 237 SLSVKAASVLKSFLNKDPKER-----LGCHPQ 263
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 40 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 99
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 100 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 156
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 157 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 216
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 217 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 276
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 277 YDPNKRISAKAALAHPFFQ 295
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 27/212 (12%)
Query: 32 NPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNY 91
+PF+V S + + +I Y GGD+ +++ + PEE + ++ +ALNY
Sbjct: 69 HPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKL--PEEHARFYSAEISLALNY 125
Query: 92 LHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKM-LISDDLASSVVGTPSYMCPELLADI 150
LH I++RD+K N+ L + I+L D+G+ K L D S GTP+Y+ PE+L
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 185
Query: 151 PYGSKSDIWSLGCCVYEMSAQKAAF-------------KAFDMQALINKINKSIVAPLPT 197
YG D W+LG ++EM A ++ F + + Q ++ K + +P
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-----IPR 240
Query: 198 VYSGAFRGLVKSMLRKNPEFRPSAAELLCHPH 229
S ++KS L K+P+ R L CHP
Sbjct: 241 SLSVKAASVLKSFLNKDPKER-----LGCHPQ 267
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 35/255 (13%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKDSWVEKGCYVCIIIGYCE 57
+Y +K + L ++ S E+ +++++ + I Y ++ Y+ + C
Sbjct: 82 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM---ECG 138
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
D+ +KK + P E+ W +L A++ +H + I+H D+K +N FL D ++L
Sbjct: 139 NIDLNSWLKKKKSID-PWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKL 195
Query: 118 GDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSLGC 163
DFG+A + D + S VGT +YM PE + D+ ++ D+WSLGC
Sbjct: 196 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 255
Query: 164 CVYEMSAQKAAFKAFDMQALINKINK--SIVAP-----LPTVYSGAFRGLVKSMLRKNPE 216
+Y M+ K F Q +IN+I+K +I+ P P + + ++K L+++P+
Sbjct: 256 ILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 310
Query: 217 FRPSAAELLCHPHLQ 231
R S ELL HP++Q
Sbjct: 311 QRISIPELLAHPYVQ 325
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 34 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 93
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 94 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 150
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 151 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 211 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 270
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 271 YDPNKRISAKAALAHPFFQ 289
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 18 RSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH--FPE 75
+ A E +++++V + FIV ++ E +C+++ GGD+ I + + F E
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLAS-S 134
+ + Q++ L +LH +I++RD+K N+ L D ++R+ D GLA L + +
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 135 VVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV-- 192
GTP +M PELL Y D ++LG +YEM A + F+A + ++ + ++
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 193 -APLPTVYSGAFRGLVKSMLRKNPE----FRPSAAE-LLCHP 228
P +S A + +++L+K+PE FR + + L HP
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 18 RSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH--FPE 75
+ A E +++++V + FIV ++ E +C+++ GGD+ I + + F E
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLAS-S 134
+ + Q++ L +LH +I++RD+K N+ L D ++R+ D GLA L + +
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 135 VVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV-- 192
GTP +M PELL Y D ++LG +YEM A + F+A + ++ + ++
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 193 -APLPTVYSGAFRGLVKSMLRKNPE----FRPSAAE-LLCHP 228
P +S A + +++L+K+PE FR + + L HP
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 133/285 (46%), Gaps = 52/285 (18%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKDSWVEKGCYVCIIIGYCE 57
+Y +K + L ++ S E+ +++++ + I Y ++ Y+ + C
Sbjct: 82 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM---ECG 138
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
D+ +KK + P E+ W +L A++ +H + I+H D+K +N FL D ++L
Sbjct: 139 NIDLNSWLKKKKSID-PWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKL 195
Query: 118 GDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSLGC 163
DFG+A + D + S VG +YM PE + D+ ++ D+WSLGC
Sbjct: 196 IDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 255
Query: 164 CVYEMSAQKAAFKAFDMQALINKINK--SIVAP-----LPTVYSGAFRGLVKSMLRKNPE 216
+Y M+ K F Q +IN+I+K +I+ P P + + ++K L+++P+
Sbjct: 256 ILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 310
Query: 217 FRPSAAELLCHPHLQ-----------------PYVLGIHLKLNGP 244
R S ELL HP++Q YVLG + LN P
Sbjct: 311 QRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSP 355
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 33 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 92
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 93 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 150 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 210 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 270 YDPNKRISAKAALAHPFFQ 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 32 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 91
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 92 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 149 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 209 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 269 YDPNKRISAKAALAHPFFQ 287
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 32 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 91
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 92 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 149 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 209 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 269 YDPNKRISAKAALAHPFFQ 287
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 18 RSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH--FPE 75
+ A E +++++V + FIV ++ E +C+++ GGD+ I + + F E
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLAS-S 134
+ + Q++ L +LH +I++RD+K N+ L D ++R+ D GLA L + +
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 135 VVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV-- 192
GTP +M PELL Y D ++LG +YEM A + F+A + ++ + ++
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 193 -APLPTVYSGAFRGLVKSMLRKNPE----FRPSAAE-LLCHP 228
P +S A + +++L+K+PE FR + + L HP
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 33 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 92
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 93 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 150 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 210 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 270 YDPNKRISAKAALAHPFFQ 288
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
Y +K I A ++ + +E+EL+ ++ +P I++ + + + + Y G
Sbjct: 50 YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLG 118
E IK+ F E + + Q+ + Y+H ++I+HRD+K NI L +D DI++
Sbjct: 110 DEIIKRKR---FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKII 166
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGL+ + +GT Y+ PE+L Y K D+WS G +Y + + F
Sbjct: 167 DFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK 225
Query: 179 DMQALINKINKSIVA---PLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
+ ++ ++ A P S + L++ ML +P R +A + L HP +Q Y
Sbjct: 226 NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 10/238 (4%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
Y +K I A ++ + +E+EL+ ++ +P I++ + + + + Y G
Sbjct: 50 YAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLG 118
E IK+ F E + + Q+ + Y+H ++I+HRD+K NI L +D DI++
Sbjct: 110 DEIIKRKR---FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKII 166
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGL+ + +GT Y+ PE+L Y K D+WS G +Y + + F
Sbjct: 167 DFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGK 225
Query: 179 DMQALINKINKSIVA---PLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
+ ++ ++ A P S + L++ ML +P R +A + L HP +Q Y
Sbjct: 226 NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 116/224 (51%), Gaps = 8/224 (3%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
++ K LA+ + R +E+ + +R+P I++ D ++ + ++I Y G ++
Sbjct: 36 IINKKVLAKSDMQGR--IEREISYLRLLRHPHIIKLYDV-IKSKDEIIMVIEYA-GNELF 91
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+ I + + + E++ ++ Q++ A+ Y H + I+HRD+K N+ L ++++ DFGL
Sbjct: 92 DYIVQRDKM--SEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL 149
Query: 123 AKMLISDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQ 181
+ ++ + + G+P+Y PE+++ Y G + D+WS G +Y M ++ F +
Sbjct: 150 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 209
Query: 182 ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
L I+ V LP S GL+K ML NP R S E++
Sbjct: 210 VLFKNISNG-VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 252
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 35 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 94
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 95 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 151
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 152 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 212 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 271
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 272 YDPNKRISAKAALAHPFFQ 290
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 35/255 (13%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKDSWVEKGCYVCIIIGYCE 57
+Y +K + L ++ S E+ +++++ + I Y ++ Y+ + C
Sbjct: 54 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM---ECG 110
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
D+ +KK + P E+ W +L A++ +H + I+H D+K +N FL D ++L
Sbjct: 111 NIDLNSWLKKKKSID-PWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKL 167
Query: 118 GDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSLGC 163
DFG+A + D + S VGT +YM PE + D+ ++ D+WSLGC
Sbjct: 168 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 227
Query: 164 CVYEMSAQKAAFKAFDMQALINKINK--SIVAP-----LPTVYSGAFRGLVKSMLRKNPE 216
+Y M+ K F Q +IN+I+K +I+ P P + + ++K L+++P+
Sbjct: 228 ILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 282
Query: 217 FRPSAAELLCHPHLQ 231
R S ELL HP++Q
Sbjct: 283 QRISIPELLAHPYVQ 297
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 9/179 (5%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
++ Y GGD+ I++ F E + + ++ + L +LH I++RD+K N+ L
Sbjct: 97 FVMEYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 154
Query: 111 RDQDIRLGDFGLAKMLISDDLAS-SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMS 169
+ I++ DFG+ K + D + + GTP Y+ PE++A PYG D W+ G +YEM
Sbjct: 155 SEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEML 214
Query: 170 AQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
A + F D L I + V+ P S + K ++ K+P A L C P
Sbjct: 215 AGQPPFDGEDEDELFQSIMEHNVS-YPKSLSKEAVSICKGLMTKHP-----AKRLGCGP 267
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 35 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 94
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 95 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 151
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 152 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 212 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 271
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 272 YDPNKRISAKAALAHPFFQ 290
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 116/224 (51%), Gaps = 8/224 (3%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
++ K LA+ + R +E+ + +R+P I++ D ++ + ++I Y G ++
Sbjct: 46 IINKKVLAKSDMQGR--IEREISYLRLLRHPHIIKLYDV-IKSKDEIIMVIEYA-GNELF 101
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+ I + + + E++ ++ Q++ A+ Y H + I+HRD+K N+ L ++++ DFGL
Sbjct: 102 DYIVQRDKM--SEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL 159
Query: 123 AKMLISDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQ 181
+ ++ + + G+P+Y PE+++ Y G + D+WS G +Y M ++ F +
Sbjct: 160 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 219
Query: 182 ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
L I+ V LP S GL+K ML NP R S E++
Sbjct: 220 VLFKNISNG-VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 262
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 116/224 (51%), Gaps = 8/224 (3%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
++ K LA+ + R +E+ + +R+P I++ D ++ + ++I Y G ++
Sbjct: 45 IINKKVLAKSDMQGR--IEREISYLRLLRHPHIIKLYDV-IKSKDEIIMVIEYA-GNELF 100
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+ I + + + E++ ++ Q++ A+ Y H + I+HRD+K N+ L ++++ DFGL
Sbjct: 101 DYIVQRDKM--SEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL 158
Query: 123 AKMLISDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQ 181
+ ++ + + G+P+Y PE+++ Y G + D+WS G +Y M ++ F +
Sbjct: 159 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 218
Query: 182 ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
L I+ V LP S GL+K ML NP R S E++
Sbjct: 219 VLFKNISNG-VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 261
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 36 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFM 95
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 96 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 153 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 213 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 272
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 273 YDPNKRISAKAALAHPFFQ 291
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 11/185 (5%)
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANH-ILHRDVKCSNIFLTRDQDIRL 117
G AE +KK PE L K V ++ AL YL H ++HRDVK SNI L I+L
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL 166
Query: 118 GDFGLAKMLISDDLASSVVGTPSYMCPELLADIP------YGSKSDIWSLGCCVYEMSAQ 171
DFG++ L+ D G +YM PE + D P Y ++D+WSLG + E++
Sbjct: 167 CDFGISGRLVDDKAKDRSAGCAAYMAPERI-DPPDPTKPDYDIRADVWSLGISLVELATG 225
Query: 172 KAAFK--AFDMQALINKINKS-IVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
+ +K D + L + + + P +SG F+ VK L K+ RP +LL H
Sbjct: 226 QFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHS 285
Query: 229 HLQPY 233
++ Y
Sbjct: 286 FIKRY 290
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 36 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 95
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 96 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 153 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 213 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 272
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 273 YDPNKRISAKAALAHPFFQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 35 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 94
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 95 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 151
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 152 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 211
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 212 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 271
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 272 YDPNKRISAKAALAHPFFQ 290
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 33 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 92
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 93 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 150 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 210 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 270 YDPNKRISAKAALAHPFFQ 288
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 36 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 95
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 96 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 152
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 153 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 213 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 272
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 273 YDPNKRISAKAALAHPFFQ 291
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 34 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 93
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 94 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 150
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 151 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 211 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 270
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 271 YDPNKRISAKAALAHPFFQ 289
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 116/224 (51%), Gaps = 8/224 (3%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
++ K LA+ + R +E+ + +R+P I++ D ++ + ++I Y G ++
Sbjct: 40 IINKKVLAKSDMQGR--IEREISYLRLLRHPHIIKLYDV-IKSKDEIIMVIEYA-GNELF 95
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+ I + + + E++ ++ Q++ A+ Y H + I+HRD+K N+ L ++++ DFGL
Sbjct: 96 DYIVQRDKM--SEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGL 153
Query: 123 AKMLISDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQ 181
+ ++ + + G+P+Y PE+++ Y G + D+WS G +Y M ++ F +
Sbjct: 154 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP 213
Query: 182 ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
L I+ V LP S GL+K ML NP R S E++
Sbjct: 214 VLFKNISNG-VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIM 256
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 32 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 91
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 92 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 149 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 209 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 269 YDPNKRISAKAALAHPFFQ 287
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 18 RSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH--FPE 75
+ A E +++++V + FIV ++ E +C+++ GGD+ I + + F E
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAF-ETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE 288
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLAS-S 134
+ + Q++ L +LH +I++RD+K N+ L D ++R+ D GLA L + +
Sbjct: 289 PRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG 348
Query: 135 VVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV-- 192
GTP +M PELL Y D ++LG +YEM A + F+A + ++ + ++
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ 408
Query: 193 -APLPTVYSGAFRGLVKSMLRKNPE----FRPSAAE-LLCHP 228
P +S A + +++L+K+PE FR + + L HP
Sbjct: 409 AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 35/255 (13%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKDSWVEKGCYVCIIIGYCE 57
+Y +K + L ++ S E+ +++++ + I Y ++ Y+ + C
Sbjct: 54 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM---ECG 110
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
D+ +KK + P E+ W +L A++ +H + I+H D+K +N FL D ++L
Sbjct: 111 NIDLNSWLKKKKSID-PWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKL 167
Query: 118 GDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSLGC 163
DFG+A + D + S VGT +YM PE + D+ ++ D+WSLGC
Sbjct: 168 IDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 227
Query: 164 CVYEMSAQKAAFKAFDMQALINKINK--SIVAP-----LPTVYSGAFRGLVKSMLRKNPE 216
+Y M+ K F Q +IN+I+K +I+ P P + + ++K L+++P+
Sbjct: 228 ILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 282
Query: 217 FRPSAAELLCHPHLQ 231
R S ELL HP++Q
Sbjct: 283 QRISIPELLAHPYVQ 297
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 34 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 93
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 94 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 150
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 151 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 211 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 270
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 271 YDPNKRISAKAALAHPFFQ 289
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 33 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 92
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 93 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 150 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 210 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 270 YDPNKRISAKAALAHPFFQ 288
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 37 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 96
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 97 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 153
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 154 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 213
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 214 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 273
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 274 YDPNKRISAKAALAHPFFQ 292
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 12/237 (5%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
V+ K ++ ++TD+ S +E++L+ ++ +P I + + + +KG + + Y G
Sbjct: 58 VISKRQVKQKTDK--ESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFD 115
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLGD 119
E I + F E + + Q+L + Y H N I+HRD+K N+ L ++D +IR+ D
Sbjct: 116 EIISRK---RFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIID 172
Query: 120 FGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
FGL+ + +GT Y+ PE+L Y K D+WS G +Y + + F +
Sbjct: 173 FGLSTHFEASKKXKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 231
Query: 180 MQALINKINK---SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
++ K+ K + P S + + L++ L P R SA + L H +Q Y
Sbjct: 232 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTY 288
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 114/258 (44%), Gaps = 32/258 (12%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
LKKIRL +T+ +A +E+ L+ + +P IV+ D + + ++ + + D+ +
Sbjct: 36 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV-IHTENKLYLVFEHVDQ-DLKK 93
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
+ + P + +L QLL L + H++ +LHRD+K N+ + + I+L DFGLA
Sbjct: 94 FMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
Query: 124 KML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDMQ 181
+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 154 RAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 213
Query: 182 ALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLRK 213
+ +I +++ P V+ G R L+ ML
Sbjct: 214 DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHY 273
Query: 214 NPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 274 DPNKRISAKAALAHPFFQ 291
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 1 MYVLKKIRLARQTDRARRSAHQ--EMELISRVR-NPFIVEYKDSWVEKGCYVCIIIGYCE 57
+Y +K ++ A +A+ + H E +++ +R +PF+V ++ + + +I+ Y
Sbjct: 84 LYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-QTETKLHLILDYIN 142
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
GG++ + + F E ++ ++ ++++AL +LH I++RD+K NI L + + L
Sbjct: 143 GGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVL 200
Query: 118 GDFGLAKMLISDDL--ASSVVGTPSYMCPELL--ADIPYGSKSDIWSLGCCVYEMSAQKA 173
DFGL+K ++D+ A GT YM P+++ D + D WSLG +YE+ +
Sbjct: 201 TDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS 260
Query: 174 AFKAFDMQALINKINKSIVA---PLPTVYSGAFRGLVKSMLRKNPEFR 218
F + +I++ I+ P P S + L++ +L K+P+ R
Sbjct: 261 PFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 34 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 93
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 94 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 150
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 151 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 211 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 270
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 271 YDPNKRISAKAALAHPFFQ 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 33 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 92
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 93 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 150 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 210 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 270 YDPNKRISAKAALAHPFFQ 288
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 32 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 91
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 92 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 149 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 209 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 269 YDPNKRISAKAALAHPFFQ 287
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 32 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFM 91
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 92 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 149 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 209 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 269 YDPNKRISAKAALAHPFFQ 287
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 35/255 (13%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKDSWVEKGCYVCIIIGYCE 57
+Y +K + L ++ S E+ +++++ + I Y ++ Y+ + C
Sbjct: 34 IYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM---ECG 90
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
D+ +KK + P E+ W +L A++ +H + I+H D+K +N FL D ++L
Sbjct: 91 NIDLNSWLKKKKSID-PWERKSYW-KNMLEAVHTIHQHGIVHSDLKPAN-FLIVDGMLKL 147
Query: 118 GDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKS-----------DIWSLGC 163
DFG+A + D + S VGT +YM PE + D+ ++ D+WSLGC
Sbjct: 148 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC 207
Query: 164 CVYEMSAQKAAFKAFDMQALINKINK--SIVAP-----LPTVYSGAFRGLVKSMLRKNPE 216
+Y M+ K F Q +IN+I+K +I+ P P + + ++K L+++P+
Sbjct: 208 ILYYMTYGKTPF-----QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPK 262
Query: 217 FRPSAAELLCHPHLQ 231
R S ELL HP++Q
Sbjct: 263 QRISIPELLAHPYVQ 277
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 33 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 92
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 93 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 150 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 210 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 270 YDPNKRISAKAALAHPFFQ 288
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 43/254 (16%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSW-----VEKGCYVCIIIGYCEGGDMAEAIKKANG 70
ARR+ ++E+ L+ +++ ++ D + +E V ++ G D+ +K
Sbjct: 71 ARRT-YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQA- 127
Query: 71 VHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD 130
+E + + QLL L Y+H+ I+HRD+K SN+ + D ++R+ DFGLA+ +D+
Sbjct: 128 --LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ--ADE 183
Query: 131 LASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINK 189
+ V T Y PE++ + + Y DIWS+GC + E+ KA F D + +I +
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
Query: 190 SIVAPLPTV-----------------------YSGAFRG-------LVKSMLRKNPEFRP 219
+ P P V S FRG L+ ML + + R
Sbjct: 244 VVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRV 303
Query: 220 SAAELLCHPHLQPY 233
SAAE L H + Y
Sbjct: 304 SAAEALAHAYFSQY 317
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 10/218 (4%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKL 78
S E+ ++ ++++ IV +D + E + +++ GG++ + I + GV + E+
Sbjct: 52 SLENEIAVLKKIKHENIVTLEDIY-ESTTHYYLVMQLVSGGELFDRILE-RGV-YTEKDA 108
Query: 79 CKWLVQLLMALNYLHANHILHRDVKCSNI-FLTRDQD--IRLGDFGLAKMLISDDLASSV 135
+ Q+L A+ YLH N I+HRD+K N+ +LT +++ I + DFGL+KM + + S+
Sbjct: 109 SLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME-QNGIMSTA 167
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV--- 192
GTP Y+ PE+LA PY D WS+G Y + F L KI +
Sbjct: 168 CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE 227
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
+P S + + + +L K+P R + + L HP +
Sbjct: 228 SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 111/259 (42%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ +
Sbjct: 36 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFM 95
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 96 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 152
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 153 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 212
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 213 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 272
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 273 YDPNKRISAKAALAHPFFQ 291
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 111/259 (42%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
LKKIRL +T+ +A +E+ L+ + +P IV+ D E Y+ +
Sbjct: 34 LKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFM 93
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 94 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGL 150
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 151 ARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 210
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 211 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 270
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 271 YDPNKRISAKAALAHPFFQ 289
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+++ Y GGD+ + K PEE +L ++++A++ +H H +HRD+K NI +
Sbjct: 151 LVMDYYVGGDLLTLLSKFED-RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209
Query: 111 RDQDIRLGDFGLAKMLISDDLASS--VVGTPSYMCPELLADIP-----YGSKSDIWSLGC 163
+ IRL DFG L+ D S VGTP Y+ PE+L + YG + D WSLG
Sbjct: 210 MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGV 269
Query: 164 CVYEMSAQKAAFKAFDMQALINKI 187
C+YEM + F A + KI
Sbjct: 270 CMYEMLYGETPFYAESLVETYGKI 293
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 112/218 (51%), Gaps = 9/218 (4%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKL 78
S E+ ++ ++++ IV +D + E ++ +++ GG++ + I + + E+
Sbjct: 66 SIENEIAVLRKIKHENIVALEDIY-ESPNHLYLVMQLVSGGELFDRIVEKG--FYTEKDA 122
Query: 79 CKWLVQLLMALNYLHANHILHRDVKCSNI-FLTRDQD--IRLGDFGLAKMLISDDLASSV 135
+ Q+L A+ YLH I+HRD+K N+ + ++D++ I + DFGL+KM D+ S+
Sbjct: 123 STLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTA 182
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKS---IV 192
GTP Y+ PE+LA PY D WS+G Y + F + L +I K+
Sbjct: 183 CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFD 242
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
+P S + + +++++ K+P R + + HP +
Sbjct: 243 SPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
L KIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 33 LXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 92
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 93 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 149
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 150 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 209
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 210 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 269
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 270 YDPNKRISAKAALAHPFFQ 288
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 112/259 (43%), Gaps = 34/259 (13%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-VEKGCYVCIIIGYCEGGDMA 62
L KIRL +T+ +A +E+ L+ + +P IV+ D E Y+ + +
Sbjct: 32 LXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFM 91
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL 122
+A G+ P K +L QLL L + H++ +LHRD+K N+ + + I+L DFGL
Sbjct: 92 DA-SALTGIPLPLIK--SYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGL 148
Query: 123 AKML-ISDDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDM 180
A+ + + V T Y PE+L Y S + DIWSLGC EM ++A F
Sbjct: 149 ARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE 208
Query: 181 QALINKINKSIVAPLPTVYSGAF----------------------------RGLVKSMLR 212
+ +I +++ P V+ G R L+ ML
Sbjct: 209 IDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLH 268
Query: 213 KNPEFRPSAAELLCHPHLQ 231
+P R SA L HP Q
Sbjct: 269 YDPNKRISAKAALAHPFFQ 287
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 15/227 (6%)
Query: 14 DRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
D+++R +E+E++ R ++P I+ KD + + G YV ++ +GG++ + I +
Sbjct: 56 DKSKRDPTEEIEILLRYGQHPNIITLKDVY-DDGKYVYVVTELXKGGELLDKILRQK--F 112
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRD----QDIRLGDFGLAKMLIS 128
F E + L + + YLHA ++HRD+K SNI + + IR+ DFG AK L +
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172
Query: 129 DD-LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF------DMQ 181
++ L + T +++ PE+L Y + DIWSLG +Y F ++
Sbjct: 173 ENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEIL 232
Query: 182 ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
A I S+ S + LV L +P R +AA +L HP
Sbjct: 233 ARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHP 279
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Query: 32 NPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNY 91
+PF+V S + + +I Y GGD+ +++ + PEE + ++ +ALNY
Sbjct: 80 HPFLVGLH-SCFQTESRLFFVIEYVNGGDLMFHMQRQRKL--PEEHARFYSAEISLALNY 136
Query: 92 LHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKM-LISDDLASSVVGTPSYMCPELLADI 150
LH I++RD+K N+ L + I+L D+G+ K L D S GTP+Y+ PE+L
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 151 PYGSKSDIWSLGCCVYEMSAQKAAF 175
YG D W+LG ++EM A ++ F
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + ++ + G D+ + +K
Sbjct: 87 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------LVTHLMGADLYKLLK 137
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 138 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 194
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 195 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 255 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 314
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 315 TFNPHKRIEVEQALAHPYLEQY 336
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 113/218 (51%), Gaps = 7/218 (3%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKK 67
+L +++D R +E+ + +R+P I++ D + + ++I Y GG++ + I +
Sbjct: 45 QLLKKSDMHMR-VEREISYLKLLRHPHIIKLYDV-ITTPTDIVMVIEYA-GGELFDYIVE 101
Query: 68 ANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLI 127
E++ ++ Q++ A+ Y H + I+HRD+K N+ L + ++++ DFGL+ ++
Sbjct: 102 KK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT 159
Query: 128 SDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINK 186
+ + G+P+Y PE++ Y G + D+WS G +Y M + F + L K
Sbjct: 160 DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKK 219
Query: 187 INKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+N S V +P S + L++ M+ +P R + E+
Sbjct: 220 VN-SCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEI 256
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 98/195 (50%), Gaps = 32/195 (16%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYV------------ 49
Y +KKIR T+ + E+ L++ + + ++V Y +W+E+ +V
Sbjct: 34 YAIKKIR---HTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTL 90
Query: 50 CIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
I + YCE + + I N ++ ++ + Q+L AL+Y+H+ I+HRD+K NIF+
Sbjct: 91 FIQMEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 149
Query: 110 TRDQDIRLGDFGLAKMLI---------------SDDLASSVVGTPSYMCPELLADIP-YG 153
+++++GDFGLAK + S D +S +GT Y+ E+L Y
Sbjct: 150 DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN 209
Query: 154 SKSDIWSLGCCVYEM 168
K D++SLG +EM
Sbjct: 210 EKIDMYSLGIIFFEM 224
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 116/264 (43%), Gaps = 40/264 (15%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKD----SWVEKGCYVCIIIGYC 56
LK +R+ + S +E+ L+ R+ +P +V D S ++ V ++ +
Sbjct: 34 LKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 93
Query: 57 EGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIR 116
+ D+ + KA P E + + Q L L++LHAN I+HRD+K NI +T ++
Sbjct: 94 DQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVK 152
Query: 117 LGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAF- 175
L DFGLA++ + VV T Y PE+L Y + D+WS+GC EM +K F
Sbjct: 153 LADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
Query: 176 ---------KAFDMQALINKINKSIVAPLPTVYSGAF--RG-----------------LV 207
K FD+ L + + LP GAF RG L+
Sbjct: 213 GNSEADQLGKIFDLIGLPPEDDWPRDVSLP---RGAFPPRGPRPVQSVVPEMEESGAQLL 269
Query: 208 KSMLRKNPEFRPSAAELLCHPHLQ 231
ML NP R SA L H +L
Sbjct: 270 LEMLTFNPHKRISAFRALQHSYLH 293
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 43/254 (16%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSW-----VEKGCYVCIIIGYCEGGDMAEAIKKANG 70
ARR+ ++E+ L+ +++ ++ D + +E V ++ G D+ +K
Sbjct: 71 ARRT-YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQA- 127
Query: 71 VHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD 130
+E + + QLL L Y+H+ I+HRD+K SN+ + D ++R+ DFGLA+ +D+
Sbjct: 128 --LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ--ADE 183
Query: 131 LASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINK 189
+ V T Y PE++ + + Y DIWS+GC + E+ KA F D + +I +
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
Query: 190 SIVAPLPTV-----------------------YSGAFRG-------LVKSMLRKNPEFRP 219
+ P P V S FRG L+ ML + + R
Sbjct: 244 VVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRV 303
Query: 220 SAAELLCHPHLQPY 233
SAAE L H + Y
Sbjct: 304 SAAEALAHAYFSQY 317
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + + + E
Sbjct: 56 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKESL--TE 112
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 113 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 171
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 232 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + + + E
Sbjct: 56 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKESL--TE 112
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 113 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 171
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 172 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 231
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 232 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 276
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 10/234 (4%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
Y K I + + R + +E + +++P IV DS E+G + +I GG++
Sbjct: 50 YAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY-LIFDLVTGGEL 108
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT---RDQDIRLG 118
E I ++ E + Q+L A+ + H ++HRD+K N+ L + ++L
Sbjct: 109 FEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLA 166
Query: 119 DFGLAKMLISDDLAS-SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA 177
DFGLA + + A GTP Y+ PE+L PYG D+W+ G +Y + F
Sbjct: 167 DFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWD 226
Query: 178 FDMQALINKINKSIV---APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
D L +I +P + + L+ ML NP R +AAE L HP
Sbjct: 227 EDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 280
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + + + E
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKESL--TE 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + + + E
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKESL--TE 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + + + E
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKESL--TE 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + + + E
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKESL--TE 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + + + E
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKESL--TE 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 115/264 (43%), Gaps = 40/264 (15%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKD----SWVEKGCYVCIIIGYC 56
LK +R+ + S +E+ L+ R+ +P +V D S ++ V ++ +
Sbjct: 34 LKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 93
Query: 57 EGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIR 116
+ D+ + KA P E + + Q L L++LHAN I+HRD+K NI +T ++
Sbjct: 94 DQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVK 152
Query: 117 LGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAF- 175
L DFGLA++ VV T Y PE+L Y + D+WS+GC EM +K F
Sbjct: 153 LADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
Query: 176 ---------KAFDMQALINKINKSIVAPLPTVYSGAF--RG-----------------LV 207
K FD+ L + + LP GAF RG L+
Sbjct: 213 GNSEADQLGKIFDLIGLPPEDDWPRDVSLP---RGAFPPRGPRPVQSVVPEMEESGAQLL 269
Query: 208 KSMLRKNPEFRPSAAELLCHPHLQ 231
ML NP R SA L H +L
Sbjct: 270 LEMLTFNPHKRISAFRALQHSYLH 293
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 115/224 (51%), Gaps = 12/224 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +R+P I+ D + E V +I+ GG++ + + + + E
Sbjct: 51 SREEIEREVNILREIRHPNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKESL--TE 107
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
++ ++L Q+L ++YLH+ I H D+K NI L D++ I+L DFG+A + + +
Sbjct: 108 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL-DKNVPNPRIKLIDFGIAHKIEAGN 166
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL---INKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q I+ +
Sbjct: 167 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 226
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
N + S + ++ +L K+P+ R + A+ L H ++
Sbjct: 227 NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + A E
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFL--AEKESLTE 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP+++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 173 EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 123/244 (50%), Gaps = 18/244 (7%)
Query: 2 YVLKKIRLARQTDRARRSA-----HQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYC 56
Y K I+ R+T +RR +E+ ++ +++P ++ + + E V +I+
Sbjct: 39 YAAKFIK-KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELV 96
Query: 57 EGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-- 114
GG++ + + + + EE+ ++L Q+L + YLH+ I H D+K NI L D++
Sbjct: 97 AGGELFDFLAEKESL--TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVP 153
Query: 115 ---IRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ 171
I++ DFGLA + + ++ GTP ++ PE++ P G ++D+WS+G Y + +
Sbjct: 154 KPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 172 KAAFKAFDMQ---ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
+ F Q A ++ +N + S + ++ +L K+P+ R + + L HP
Sbjct: 214 ASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273
Query: 229 HLQP 232
++P
Sbjct: 274 WIKP 277
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + + + E
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKESL--TE 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 5/190 (2%)
Query: 26 LISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQL 85
L+ V++PF+V S+ + + ++ Y GG++ +++ F E + + ++
Sbjct: 92 LLKNVKHPFLVGLHFSF-QTADKLYFVLDYINGGELFYHLQRERC--FLEPRARFYAAEI 148
Query: 86 LMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS-DDLASSVVGTPSYMCP 144
AL YLH+ +I++RD+K NI L I L DFGL K I + S+ GTP Y+ P
Sbjct: 149 ASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAP 208
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFR 204
E+L PY D W LG +YEM F + + + + I + P + + A R
Sbjct: 209 EVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSA-R 267
Query: 205 GLVKSMLRKN 214
L++ +L+K+
Sbjct: 268 HLLEGLLQKD 277
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + A E
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFL--AEKESLTE 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 115/225 (51%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + + + E
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFLAEKESL--TE 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 115/264 (43%), Gaps = 40/264 (15%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKD----SWVEKGCYVCIIIGYC 56
LK +R+ + S +E+ L+ R+ +P +V D S ++ V ++ +
Sbjct: 34 LKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV 93
Query: 57 EGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIR 116
+ D+ + KA P E + + Q L L++LHAN I+HRD+K NI +T ++
Sbjct: 94 DQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVK 152
Query: 117 LGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAF- 175
L DFGLA++ VV T Y PE+L Y + D+WS+GC EM +K F
Sbjct: 153 LADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 212
Query: 176 ---------KAFDMQALINKINKSIVAPLPTVYSGAF--RG-----------------LV 207
K FD+ L + + LP GAF RG L+
Sbjct: 213 GNSEADQLGKIFDLIGLPPEDDWPRDVSLP---RGAFPPRGPRPVQSVVPEMEESGAQLL 269
Query: 208 KSMLRKNPEFRPSAAELLCHPHLQ 231
ML NP R SA L H +L
Sbjct: 270 LEMLTFNPHKRISAFRALQHSYLH 293
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I+ GG++ + + A E
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILILELVAGGELFDFL--AEKESLTE 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ ++ Y GGD+ I+ + F + + ++++ L +LH+ I++RD+K NI
Sbjct: 94 LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 151
Query: 109 LTRDQDIRLGDFGLAKM-LISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYE 167
L +D I++ DFG+ K ++ D + GTP Y+ PE+L Y D WS G +YE
Sbjct: 152 LDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 211
Query: 168 MSAQKAAFKAFDMQALINKI 187
M ++ F D + L + I
Sbjct: 212 MLIGQSPFHGQDEEELFHSI 231
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 109/220 (49%), Gaps = 12/220 (5%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
++ E+ ++ R+ +P I++ K+ + E + +++ GG++ + I + ++ E
Sbjct: 92 KKIVRTEIGVLLRLSHPNIIKLKEIF-ETPTEISLVLELVTGGELFDRIVEKG--YYSER 148
Query: 77 KLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR---DQDIRLGDFGLAKMLISDDLAS 133
+ Q+L A+ YLH N I+HRD+K N+ D +++ DFGL+K++ L
Sbjct: 149 DAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 134 SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAF-----KAFDMQALINKIN 188
+V GTP Y PE+L YG + D+WS+G Y + F F + ++N
Sbjct: 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN-CE 267
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
++P S + LV+ ++ +P+ R + + L HP
Sbjct: 268 YYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHP 307
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 114/224 (50%), Gaps = 12/224 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +R+P I+ D + E V +I+ GG++ + + + + E
Sbjct: 58 SREEIEREVNILREIRHPNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKESL--TE 114
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
++ ++L Q+L ++YLH+ I H D+K NI L D++ I+L DFG+A + + +
Sbjct: 115 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL-DKNVPNPRIKLIDFGIAHKIEAGN 173
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL---INKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q I+ +
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
N + S + ++ +L K+P+ R A+ L H ++
Sbjct: 234 NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 36/194 (18%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD----- 130
E + +L QLL L Y+H+ ++HRD+K SN+ + + ++++GDFG+A+ L +
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 131 LASSVVGTPSYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKAAF--KAFDMQ------ 181
+ V T Y PEL+ + Y D+WS+GC EM A++ F K + Q
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 277
Query: 182 -------ALINKINKSIV------------APLPTVYSGAFR---GLVKSMLRKNPEFRP 219
A+I + V P TVY GA R L+ MLR P R
Sbjct: 278 VLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARI 337
Query: 220 SAAELLCHPHLQPY 233
SAA L HP L Y
Sbjct: 338 SAAAALRHPFLAKY 351
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVE----KGCYVCIIIGYCEGGDMAEAIKKA 68
T R+ +E E + +++P IV + DSW K C V ++ G + +K+
Sbjct: 65 TKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIV-LVTELXTSGTLKTYLKRF 123
Query: 69 NGVHFPEEKLCKWLVQLLMALNYLHANH--ILHRDVKCSNIFLTR-DQDIRLGDFGLAKM 125
+ L W Q+L L +LH I+HRD+KC NIF+T +++GD GLA
Sbjct: 124 KVXKI--KVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-T 180
Query: 126 LISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALIN 185
L A +V+GTP + PE + Y D+++ G C E + + + A I
Sbjct: 181 LKRASFAKAVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIY 239
Query: 186 KINKSIVAP--LPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+ S V P V + +++ +R+N + R S +LL H Q
Sbjct: 240 RRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 287
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ ++ Y GGD+ I+ + F + + ++++ L +LH+ I++RD+K NI
Sbjct: 93 LFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNIL 150
Query: 109 LTRDQDIRLGDFGLAKM-LISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYE 167
L +D I++ DFG+ K ++ D + GTP Y+ PE+L Y D WS G +YE
Sbjct: 151 LDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 210
Query: 168 MSAQKAAFKAFDMQALINKI 187
M ++ F D + L + I
Sbjct: 211 MLIGQSPFHGQDEEELFHSI 230
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 88/194 (45%), Gaps = 36/194 (18%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD----- 130
E + +L QLL L Y+H+ ++HRD+K SN+ + + ++++GDFG+A+ L +
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 131 LASSVVGTPSYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKAAF-------------- 175
+ V T Y PEL+ + Y D+WS+GC EM A++ F
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 278
Query: 176 -------------KAFDMQALINKINKSIVAPLPTVYSGAFR---GLVKSMLRKNPEFRP 219
A ++A I + P TVY GA R L+ MLR P R
Sbjct: 279 VLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARI 338
Query: 220 SAAELLCHPHLQPY 233
SAA L HP L Y
Sbjct: 339 SAAAALRHPFLAKY 352
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 43/254 (16%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSW-----VEKGCYVCIIIGYCEGGDMAEAIKKANG 70
ARR+ ++E+ L+ +++ ++ D + +E V ++ G D+ +K
Sbjct: 63 ARRT-YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQA- 119
Query: 71 VHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD 130
+E + + QLL L Y+H+ I+HRD+K SN+ + D ++R+ DFGLA+ +D+
Sbjct: 120 --LSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQ--ADE 175
Query: 131 LASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINK 189
+ V T Y PE++ + + Y DIWS+GC + E+ KA F D + +I +
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 235
Query: 190 SIVAPLPTV-----------------------YSGAFRG-------LVKSMLRKNPEFRP 219
+ P P V S FRG L+ ML + + R
Sbjct: 236 VVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRV 295
Query: 220 SAAELLCHPHLQPY 233
SAAE L H + Y
Sbjct: 296 SAAEALAHAYFSQY 309
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 114/224 (50%), Gaps = 12/224 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +R+P I+ D + E V +I+ GG++ + + + + E
Sbjct: 72 SREEIEREVNILREIRHPNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKESL--TE 128
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
++ ++L Q+L ++YLH+ I H D+K NI L D++ I+L DFG+A + + +
Sbjct: 129 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL-DKNVPNPRIKLIDFGIAHKIEAGN 187
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL---INKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q I+ +
Sbjct: 188 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 247
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
N + S + ++ +L K+P+ R A+ L H ++
Sbjct: 248 NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 110/249 (44%), Gaps = 40/249 (16%)
Query: 19 SAHQEMELISRVR---NPFIVEYKD----SWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
S +E+ L+ R+ +P +V D S ++ V ++ + + D+ + KA
Sbjct: 57 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP 115
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL 131
P E + + Q L L++LHAN I+HRD+K NI +T ++L DFGLA++
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 175
Query: 132 ASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAF----------KAFDMQ 181
+ VV T Y PE+L Y + D+WS+GC EM +K F K FD+
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLI 235
Query: 182 ALINKINKSIVAPLPTVYSGAF--RG-----------------LVKSMLRKNPEFRPSAA 222
L + + LP GAF RG L+ ML NP R SA
Sbjct: 236 GLPPEDDWPRDVSLP---RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAF 292
Query: 223 ELLCHPHLQ 231
L H +L
Sbjct: 293 RALQHSYLH 301
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 6 KIRLARQTDRA--RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
K R +R + R R +E+ ++ +V +P I+ D + E V +I+ GG++ +
Sbjct: 46 KKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY-ENRTDVVLILELVSGGELFD 104
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-----RLG 118
+ + + EE+ ++ Q+L +NYLH I H D+K NI L D++I +L
Sbjct: 105 FLAQKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLI 161
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGLA + ++ GTP ++ PE++ P G ++D+WS+G Y + + + F
Sbjct: 162 DFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 179 DMQ---ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
Q A I ++ + S + ++ +L K R + E L HP + P
Sbjct: 222 TKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Query: 21 HQEMELISRV----RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
HQ++E +R+ ++P IV DS E+G + +I GG++ E I ++ E
Sbjct: 54 HQKLEREARICRLLKHPNIVRLHDSISEEGHHY-LIFDLVTGGELFEDIVARE--YYSEA 110
Query: 77 KLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT---RDQDIRLGDFGLAKMLISDDLAS 133
+ Q+L A+ + H ++HR++K N+ L + ++L DFGLA + + A
Sbjct: 111 DASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW 170
Query: 134 -SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GTP Y+ PE+L PYG D+W+ G +Y + F D L +I
Sbjct: 171 FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAY 230
Query: 193 ---APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
+P + + L+ ML NP R +AAE L HP
Sbjct: 231 DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 114/225 (50%), Gaps = 12/225 (5%)
Query: 16 ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E+ ++ +++P ++ + + E V +I GG++ + + + + E
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVY-ENKTDVILIGELVAGGELFDFLAEKESL--TE 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLGDFGLAKMLISDD 130
E+ ++L Q+L + YLH+ I H D+K NI L D++ I++ DFGLA + +
Sbjct: 114 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL-DRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ---ALINKI 187
++ GTP ++ PE++ P G ++D+WS+G Y + + + F Q A ++ +
Sbjct: 173 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV 232
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
N + S + ++ +L K+P+ R + + L HP ++P
Sbjct: 233 NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP 277
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 11/220 (5%)
Query: 14 DRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
DRAR+ A E+ +V ++P V + +W E+G + + C G + +A G
Sbjct: 99 DRARKLA--EVGSHEKVGQHPCCVRLEQAW-EEGGILYLQTELC--GPSLQQHCEAWGAS 153
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
PE ++ +L L+AL +LH+ ++H DVK +NIFL +LGDFGL L +
Sbjct: 154 LPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG 213
Query: 133 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
G P YM PELL YG+ +D++SLG + E++ + ++ + +
Sbjct: 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGYL 269
Query: 193 APLPTV-YSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
P T S R ++ ML +P+ R +A LL P L+
Sbjct: 270 PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLR 309
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 86/198 (43%), Gaps = 26/198 (13%)
Query: 60 DMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGD 119
D+ + K P E + + QLL L++LH++ ++HRD+K NI +T I+L D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 120 FGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
FGLA++ +SVV T Y PE+L Y + D+WS+GC EM +K F+
Sbjct: 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 180 MQALINKINKSIVAP----------LP----------------TVYSGAFRGLVKSMLRK 213
+ KI I P LP T + L+ L
Sbjct: 224 DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTF 283
Query: 214 NPEFRPSAAELLCHPHLQ 231
NP R SA L HP+ Q
Sbjct: 284 NPAKRISAYSALSHPYFQ 301
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 124/239 (51%), Gaps = 13/239 (5%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVR---NPFIVEYKDSWVEKGCYVCIIIGYCEG 58
+V + I++ R+T + S + +E ++ ++ +P I++ D + +K Y ++ Y +G
Sbjct: 62 HVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECY-KG 120
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---TRDQDI 115
G++ + I + + F E + Q+L + YLH ++I+HRD+K N+ L +D I
Sbjct: 121 GELFDEI--IHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALI 178
Query: 116 RLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
++ DFGL+ + + +GT Y+ PE+L Y K D+WS+G ++ + A F
Sbjct: 179 KIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF 237
Query: 176 KAFDMQALINKINK---SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
Q ++ K+ K + +P S + L+K ML+ + + R SA + L HP ++
Sbjct: 238 GGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%), Gaps = 5/153 (3%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLI-SDDLASSVVGTP 139
+ L+ + YLH I+HRD+K SN+ + D I++ DFG++ SD L S+ VGTP
Sbjct: 142 YFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTP 201
Query: 140 SYMCPELLAD---IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKI-NKSIVAPL 195
++M PE L++ I G D+W++G +Y + F + L +KI ++++ P
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD 261
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
+ + L+ ML KNPE R E+ HP
Sbjct: 262 QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHP 294
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 86/198 (43%), Gaps = 26/198 (13%)
Query: 60 DMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGD 119
D+ + K P E + + QLL L++LH++ ++HRD+K NI +T I+L D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 120 FGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
FGLA++ +SVV T Y PE+L Y + D+WS+GC EM +K F+
Sbjct: 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 180 MQALINKINKSIVAP----------LP----------------TVYSGAFRGLVKSMLRK 213
+ KI I P LP T + L+ L
Sbjct: 224 DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTF 283
Query: 214 NPEFRPSAAELLCHPHLQ 231
NP R SA L HP+ Q
Sbjct: 284 NPAKRISAYSALSHPYFQ 301
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 86/198 (43%), Gaps = 26/198 (13%)
Query: 60 DMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGD 119
D+ + K P E + + QLL L++LH++ ++HRD+K NI +T I+L D
Sbjct: 104 DLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLAD 163
Query: 120 FGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD 179
FGLA++ +SVV T Y PE+L Y + D+WS+GC EM +K F+
Sbjct: 164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS 223
Query: 180 MQALINKINKSIVAP----------LP----------------TVYSGAFRGLVKSMLRK 213
+ KI I P LP T + L+ L
Sbjct: 224 DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTF 283
Query: 214 NPEFRPSAAELLCHPHLQ 231
NP R SA L HP+ Q
Sbjct: 284 NPAKRISAYSALSHPYFQ 301
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 6/229 (2%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
+KK+ Q + A++E+ L+ V + I+ + + + Y M
Sbjct: 54 IKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 113
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
+ + + E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA
Sbjct: 114 NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Query: 124 KMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL 183
+ + + + V T Y PE++ + Y DIWS+GC + EM K F D
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 184 INKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
NK+ + + P P F ++ +R E RP A L P L P
Sbjct: 234 WNKVIEQLGTPCP-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 276
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
+ K I + + R + +E + ++++P IV DS +++ + ++ GG++
Sbjct: 57 FAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-IQEESFHYLVFDLVTGGEL 115
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT---RDQDIRLG 118
E I + E + Q+L ++ Y H+N I+HR++K N+ L + ++L
Sbjct: 116 FEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 173
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGLA + + GTP Y+ PE+L PY DIW+ G +Y + F
Sbjct: 174 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 233
Query: 179 DMQALINKINKSIV---APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
D L +I +P + + L+ SML NP+ R +A + L P +
Sbjct: 234 DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GGDM +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYMPGGDMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--KGRTWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GGDM +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYMPGGDMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 17/219 (7%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKL 78
+ QE +L + +++P I+ + + K +C+++ + GG + + +G P + L
Sbjct: 52 NVRQEAKLFAMLKHPNIIALRGVCL-KEPNLCLVMEFARGGPLNRVL---SGKRIPPDIL 107
Query: 79 CKWLVQLLMALNYLHANHI---LHRDVKCSNIFLTR--------DQDIRLGDFGLAKMLI 127
W VQ+ +NYLH I +HRD+K SNI + + ++ +++ DFGLA+
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW- 166
Query: 128 SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKI 187
S G ++M PE++ + SD+WS G ++E+ + F+ D A+ +
Sbjct: 167 HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV 226
Query: 188 NKSIVA-PLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ +A P+P+ F L++ +P RPS +L
Sbjct: 227 AMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 43/251 (17%)
Query: 22 QEMELISRVRNPFIVEYKDSW----VEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
+E++++ R R+ I+ D +E+ V I+ E D+ + +K H +
Sbjct: 70 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDH 125
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD----LAS 133
+C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D +
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 134 SVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF------------ 178
V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 245
Query: 179 -----DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSMLRKNPEFRPSAA 222
D+ +IN ++ + LP ++ F L+ ML NP R
Sbjct: 246 SPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 305
Query: 223 ELLCHPHLQPY 233
+ L HP+L+ Y
Sbjct: 306 QALAHPYLEQY 316
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 108/231 (46%), Gaps = 19/231 (8%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
+KK+RL + RA +E+ + + +P IV + V +G +V I + EGG +
Sbjct: 122 AVKKVRL--EVFRA-----EELMACAGLTSPRIVPLYGA-VREGPWVNIFMELLEGGSLG 173
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFG 121
+ +K+ PE++ +L Q L L YLH+ ILH DVK N+ L+ D L DFG
Sbjct: 174 QLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFG 231
Query: 122 LAKMLISDDLASSVV------GTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
A L D L S++ GT ++M PE++ +K D+WS C + M +
Sbjct: 232 HAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
Query: 176 KAFDMQALINKINKS--IVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
F L KI V +P + ++ LRK P R SAAEL
Sbjct: 292 TQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Query: 48 YVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNI 107
++ +++ Y GGD+ + K PE+ ++ ++++A++ +H H +HRD+K N+
Sbjct: 148 HLYLVMDYYVGGDLLTLLSKFED-KLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNV 206
Query: 108 FLTRDQDIRLGDFGLAKMLISDD--LASSV-VGTPSYMCPELLADIP-----YGSKSDIW 159
L + IRL DFG + + ++DD + SSV VGTP Y+ PE+L + YG + D W
Sbjct: 207 LLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 265
Query: 160 SLGCCVYEMSAQKAAFKAFDMQALINKI 187
SLG C+YEM + F A + KI
Sbjct: 266 SLGVCMYEMLYGETPFYAESLVETYGKI 293
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
+ K I + + R + +E + ++++P IV DS +++ + ++ GG++
Sbjct: 34 FAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-IQEESFHYLVFDLVTGGEL 92
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT---RDQDIRLG 118
E I + E + Q+L ++ Y H+N I+HR++K N+ L + ++L
Sbjct: 93 FEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 150
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGLA + + GTP Y+ PE+L PY DIW+ G +Y + F
Sbjct: 151 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
Query: 179 DMQALINKINKSIV---APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
D L +I +P + + L+ SML NP+ R +A + L P +
Sbjct: 211 DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Query: 48 YVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNI 107
++ +++ Y GGD+ + K PE+ ++ ++++A++ +H H +HRD+K N+
Sbjct: 164 HLYLVMDYYVGGDLLTLLSKFED-KLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNV 222
Query: 108 FLTRDQDIRLGDFGLAKMLISDD--LASSV-VGTPSYMCPELLADIP-----YGSKSDIW 159
L + IRL DFG + + ++DD + SSV VGTP Y+ PE+L + YG + D W
Sbjct: 223 LLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 281
Query: 160 SLGCCVYEMSAQKAAFKAFDMQALINKI 187
SLG C+YEM + F A + KI
Sbjct: 282 SLGVCMYEMLYGETPFYAESLVETYGKI 309
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 246 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 276
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 124/269 (46%), Gaps = 44/269 (16%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW----VEKGCYVCIIIGYCEGG 59
+KKI +R+ +E++++ R R+ I+ D +E+ V I+ E
Sbjct: 53 IKKISPFEHQTYCQRTL-REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET- 110
Query: 60 DMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGD 119
D+ + +K H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 120 FGLAKMLISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAA 174
FGLA++ D + V T Y PE++ + +KS DIWS+GC + EM + +
Sbjct: 168 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 227
Query: 175 F--KAF-----------------DMQALINKINKSIVAPLP----TVYSGAF-------R 204
F K + D+ +IN ++ + LP ++ F
Sbjct: 228 FPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 287
Query: 205 GLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L+ ML NP R + L HP+L+ Y
Sbjct: 288 DLLDKMLTFNPHKRIEVEQALAHPYLEQY 316
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 117/251 (46%), Gaps = 43/251 (17%)
Query: 22 QEMELISRVRNPFIVEYKDSW----VEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
+E++++ R R+ I+ D +E+ V I+ E D+ + +K H +
Sbjct: 74 REIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ---HLSNDH 129
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD----LAS 133
+C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D +
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 134 SVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF------------ 178
V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG 249
Query: 179 -----DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSMLRKNPEFRPSAA 222
D+ +IN ++ + LP ++ F L+ ML NP R
Sbjct: 250 SPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVE 309
Query: 223 ELLCHPHLQPY 233
+ L HP+L+ Y
Sbjct: 310 QALAHPYLEQY 320
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%), Gaps = 47/253 (18%)
Query: 22 QEMELISRVRNPFIVEYKD----SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
+E++++ R R+ ++ +D S +E V I+ E D+ + +K +
Sbjct: 90 REIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLYKLLKSQ---QLSNDH 145
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD------DL 131
+C +L Q+L L Y+H+ ++LHRD+K SN+ + D+++ DFGLA+ I+D
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLAR--IADPEHDHTGF 203
Query: 132 ASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF---------- 178
+ V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 204 LTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 263
Query: 179 -------DMQALINKINKSIVAPLPTVYSGAFR-----------GLVKSMLRKNPEFRPS 220
D+ +IN ++ + LP+ A+ L+ ML NP R +
Sbjct: 264 LGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRIT 323
Query: 221 AAELLCHPHLQPY 233
E L HP+L+ Y
Sbjct: 324 VEEALAHPYLEQY 336
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 6/229 (2%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
+KK+ Q + A++E+ L+ V + I+ + + + Y M
Sbjct: 54 IKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDA 113
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
+ + + E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA
Sbjct: 114 NLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
Query: 124 KMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL 183
+ + + + V T Y PE++ + Y DIWS+GC + EM K F D
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 184 INKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
NK+ + + P P F ++ +R E RP A L P L P
Sbjct: 234 WNKVIEQLGTPCP-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 276
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 119 ERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY 178
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 239 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 269
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 67 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 117
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 118 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 174
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 235 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQY 316
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 168
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + ++ GTP Y+
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGATWTLCGTPEYL 226
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 285
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 286 LKDLLRNLLQ 295
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFGLAK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV--KGRTWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 32/194 (16%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYV------------ 49
Y +KKIR T+ + E+ L++ + + ++V Y +W+E+ +V
Sbjct: 34 YAIKKIR---HTEEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTL 90
Query: 50 CIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
I YCE + + I N ++ ++ + Q+L AL+Y+H+ I+HR++K NIF+
Sbjct: 91 FIQXEYCENRTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFI 149
Query: 110 TRDQDIRLGDFGLAKMLI---------------SDDLASSVVGTPSYMCPELLADIP-YG 153
+++++GDFGLAK + S D +S +GT Y+ E+L Y
Sbjct: 150 DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYN 209
Query: 154 SKSDIWSLGCCVYE 167
K D +SLG +E
Sbjct: 210 EKIDXYSLGIIFFE 223
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 8/212 (3%)
Query: 22 QEMELISRVRNPFIVEYKDS-WVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E++L+ R+R+ +++ D + E+ + +++ YC G M E + FP +
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHG 113
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML---ISDDLASSVVG 137
+ QL+ L YLH+ I+H+D+K N+ LT +++ G+A+ L +DD + G
Sbjct: 114 YFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQG 173
Query: 138 TPSYMCPELL--ADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
+P++ PE+ D G K DIWS G +Y ++ F+ ++ L I K A +
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYA-I 232
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
P L+K ML P R S ++ H
Sbjct: 233 PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 71 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 121
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 122 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVA 178
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 239 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQY 320
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 100/193 (51%), Gaps = 12/193 (6%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
M +L K + +++D A +E ++++ +P++V+ ++ + Y+ +++ Y GGD
Sbjct: 104 MKLLSKFEMIKRSDSA--FFWEERDIMAFANSPWVVQLFYAF-QDDRYLYMVMEYMPGGD 160
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + + PE+ + ++++AL+ +H+ +HRDVK N+ L + ++L DF
Sbjct: 161 LVNLMSNYD---VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
Query: 121 GLAKMLISDDLA--SSVVGTPSYMCPELL----ADIPYGSKSDIWSLGCCVYEMSAQKAA 174
G + + + + VGTP Y+ PE+L D YG + D WS+G +YEM
Sbjct: 218 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
Query: 175 FKAFDMQALINKI 187
F A + +KI
Sbjct: 278 FYADSLVGTYSKI 290
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 100/193 (51%), Gaps = 12/193 (6%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
M +L K + +++D A +E ++++ +P++V+ ++ + Y+ +++ Y GGD
Sbjct: 99 MKLLSKFEMIKRSDSA--FFWEERDIMAFANSPWVVQLFYAF-QDDRYLYMVMEYMPGGD 155
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + + PE+ + ++++AL+ +H+ +HRDVK N+ L + ++L DF
Sbjct: 156 LVNLMSNYD---VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 212
Query: 121 GLAKMLISDDLA--SSVVGTPSYMCPELL----ADIPYGSKSDIWSLGCCVYEMSAQKAA 174
G + + + + VGTP Y+ PE+L D YG + D WS+G +YEM
Sbjct: 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
Query: 175 FKAFDMQALINKI 187
F A + +KI
Sbjct: 273 FYADSLVGTYSKI 285
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
+ K I + + R + +E + ++++P IV DS +++ + ++ GG++
Sbjct: 33 FAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-IQEESFHYLVFDLVTGGEL 91
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT---RDQDIRLG 118
E I + E + Q+L ++ Y H+N I+HR++K N+ L + ++L
Sbjct: 92 FEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 149
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGLA + + GTP Y+ PE+L PY DIW+ G +Y + F
Sbjct: 150 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 209
Query: 179 DMQALINKINKSIV---APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
D L +I +P + + L+ SML NP+ R +A + L P +
Sbjct: 210 DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLAGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFGLAK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--KGRTWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 9/235 (3%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
+ K I + + R + +E + ++++P IV DS +++ + ++ GG++
Sbjct: 34 FAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-IQEESFHYLVFDLVTGGEL 92
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT---RDQDIRLG 118
E I + E + Q+L ++ Y H+N I+HR++K N+ L + ++L
Sbjct: 93 FEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 150
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGLA + + GTP Y+ PE+L PY DIW+ G +Y + F
Sbjct: 151 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210
Query: 179 DMQALINKINKSIV---APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
D L +I +P + + L+ SML NP+ R +A + L P +
Sbjct: 211 DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 15/227 (6%)
Query: 14 DRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
D+++R +E+E++ R ++P I+ KD + + G +V ++ GG++ + I +
Sbjct: 61 DKSKRDPSEEIEILLRYGQHPNIITLKDVY-DDGKHVYLVTELMRGGELLDKILRQK--F 117
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD----IRLGDFGLAKMLIS 128
F E + L + + YLH+ ++HRD+K SNI + +R+ DFG AK L +
Sbjct: 118 FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA 177
Query: 129 DD-LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFK---AFDMQALI 184
++ L + T +++ PE+L Y DIWSLG +Y M A F + + ++
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
Query: 185 NKINK---SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
+I ++ S + LV ML +P R +A ++L HP
Sbjct: 238 TRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHP 284
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 100/193 (51%), Gaps = 12/193 (6%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
M +L K + +++D A +E ++++ +P++V+ ++ + Y+ +++ Y GGD
Sbjct: 104 MKLLSKFEMIKRSDSA--FFWEERDIMAFANSPWVVQLFYAF-QDDRYLYMVMEYMPGGD 160
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + + PE+ + ++++AL+ +H+ +HRDVK N+ L + ++L DF
Sbjct: 161 LVNLMSNYD---VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
Query: 121 GLAKMLISDDLA--SSVVGTPSYMCPELL----ADIPYGSKSDIWSLGCCVYEMSAQKAA 174
G + + + + VGTP Y+ PE+L D YG + D WS+G +YEM
Sbjct: 218 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
Query: 175 FKAFDMQALINKI 187
F A + +KI
Sbjct: 278 FYADSLVGTYSKI 290
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 246 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 276
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLXGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + ++ GTP Y+
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWTLCGTPEYL 206
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 265
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 266 LKDLLRNLLQ 275
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 113/239 (47%), Gaps = 17/239 (7%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKG-CYVCI-IIGYCEGGDM 61
+K+IR + +R + V PF V + + +G ++C+ ++
Sbjct: 37 VKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFY 96
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHAN-HILHRDVKCSNIFLTRDQDIRLGDF 120
+ I K + PE+ L K V ++ AL +LH+ ++HRDVK SN+ + +++ DF
Sbjct: 97 KQVIDKGQTI--PEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDF 154
Query: 121 GLAKMLISDDLASSV-VGTPSYMCPEL----LADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
G++ L+ DD+A + G YM PE L Y KSDIWSLG + E++ + +
Sbjct: 155 GISGYLV-DDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPY 213
Query: 176 KAFDMQALINKINKSIVAPLPTV----YSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
++ ++ + + P P + +S F L+KN + RP+ EL+ HP
Sbjct: 214 DSWGTP--FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 97/190 (51%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 133
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + ++ GTP Y+
Sbjct: 134 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWTLCGTPEYL 191
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 192 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 250
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 251 LKDLLRNLLQ 260
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 67 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 117
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 118 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 174
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 235 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQY 316
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 65 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 115
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 116 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 172
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF------ 175
D + V T Y PE++ + +KS DIWS+GC + EM + + F
Sbjct: 173 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232
Query: 176 -------------KAFDMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
+ D+ +IN ++ + LP ++ F L+ ML
Sbjct: 233 DQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 292
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 293 TFNPHKRIEVEQALAHPYLEQY 314
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 69 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 119
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 120 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 176
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 177 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 236
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 237 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 296
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 297 TFNPHKRIEVEQALAHPYLEQY 318
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 71 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 121
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 122 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 239 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQY 320
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 17/242 (7%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKG-CYVCI-IIGYCEG 58
+ +K+IR + +R + V PF V + + +G ++C+ ++
Sbjct: 78 IMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLD 137
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHAN-HILHRDVKCSNIFLTRDQDIRL 117
+ I K G PE+ L K V ++ AL +LH+ ++HRDVK SN+ + +++
Sbjct: 138 KFYKQVIDK--GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKM 195
Query: 118 GDFGLAKMLISDDLASSV-VGTPSYMCPEL----LADIPYGSKSDIWSLGCCVYEMSAQK 172
DFG++ L+ D +A ++ G YM PE L Y KSDIWSLG + E++ +
Sbjct: 196 CDFGISGYLV-DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 254
Query: 173 AAFKAFDMQALINKINKSIVAPLPTV----YSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
+ ++ ++ + + P P + +S F L+KN + RP+ EL+ HP
Sbjct: 255 FPYDSWGTP--FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHP 312
Query: 229 HL 230
Sbjct: 313 FF 314
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YA 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV--KGRTWXLCGTPEYL 206
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 265
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 266 LKDLLRNLLQ 275
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFXEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFXEPHARF--YA 168
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 226
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 285
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 286 LKDLLRNLLQ 295
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 72 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 122
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 123 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 179
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 180 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 240 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 299
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 300 TFNPHKRIEVEQALAHPYLEQY 321
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 10/234 (4%)
Query: 11 RQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANG 70
+ ++ + E+ L+ + +P I++ D + +K Y ++ + EGG++ E I N
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKK-YFYLVTEFYEGGELFEQI--INR 140
Query: 71 VHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ---DIRLGDFGLAKMLI 127
F E + Q+L + YLH ++I+HRD+K NI L +I++ DFGL+
Sbjct: 141 HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Query: 128 SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKI 187
D +GT Y+ PE+L Y K D+WS G +Y + F + Q +I K+
Sbjct: 201 KDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKV 259
Query: 188 NKSIVAPLPTVY---SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIH 238
K + S + L+K ML + R +A E L ++ Y I+
Sbjct: 260 EKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNIN 313
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 73 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 123
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 124 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 180
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 181 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 240
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 241 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 300
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 301 TFNPHKRIEVEQALAHPYLEQY 322
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 64 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 114
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 115 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 171
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 172 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 231
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 232 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 291
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 292 TFNPHKRIEVEQALAHPYLEQY 313
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 71 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 121
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 122 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 239 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQY 320
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFXEPHARF--YA 142
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 143 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 200
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 201 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 259
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 260 LKDLLRNLLQ 269
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 87 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 137
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 138 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 194
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 195 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 254
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 255 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 314
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 315 TFNPHKRIEVEQALAHPYLEQY 336
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 65 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 115
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 116 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 172
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 173 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 232
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 233 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 292
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 293 TFNPHKRIEVEQALAHPYLEQY 314
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 112/227 (49%), Gaps = 15/227 (6%)
Query: 14 DRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
D+++R +E+E++ R ++P I+ KD + + G +V ++ GG++ + I +
Sbjct: 61 DKSKRDPSEEIEILLRYGQHPNIITLKDVY-DDGKHVYLVTELMRGGELLDKILRQK--F 117
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD----IRLGDFGLAKMLIS 128
F E + L + + YLH+ ++HRD+K SNI + +R+ DFG AK L +
Sbjct: 118 FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA 177
Query: 129 DD-LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFK---AFDMQALI 184
++ L + T +++ PE+L Y DIWSLG +Y M A F + + ++
Sbjct: 178 ENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEIL 237
Query: 185 NKINK---SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
+I ++ S + LV ML +P R +A ++L HP
Sbjct: 238 TRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHP 284
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFXEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGRFXEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+ + + +P IV + V +G +V I + EGG + + IK+ PE++ +
Sbjct: 99 EELVACAGLSSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYY 155
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-IRLGDFGLAKMLISDDLASSVV---- 136
L Q L L YLH ILH DVK N+ L+ D L DFG A L D L S++
Sbjct: 156 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 137 --GTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAP 194
GT ++M PE++ P +K DIWS C + M + + L KI
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPI 275
Query: 195 LPTVYSGA--FRGLVKSMLRKNPEFRPSAAEL 224
S A ++ LRK P R SA EL
Sbjct: 276 REIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 307
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 107/231 (46%), Gaps = 19/231 (8%)
Query: 3 VLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA 62
+KK+RL + RA +E+ + + +P IV + V +G +V I + EGG +
Sbjct: 103 AVKKVRL--EVFRA-----EELMACAGLTSPRIVPLYGA-VREGPWVNIFMELLEGGSLG 154
Query: 63 EAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFG 121
+ +K+ PE++ +L Q L L YLH+ ILH DVK N+ L+ D L DFG
Sbjct: 155 QLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFG 212
Query: 122 LAKMLISDDLASSVV------GTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
A L D L ++ GT ++M PE++ +K D+WS C + M +
Sbjct: 213 HAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
Query: 176 KAFDMQALINKINKS--IVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
F L KI V +P + ++ LRK P R SAAEL
Sbjct: 273 TQFFRGPLCLKIASEPPPVREIPPSCAPLTAQAIQEGLRKEPIHRVSAAEL 323
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 168
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 226
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 227 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 285
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 286 LKDLLRNLLQ 295
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 75 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 125
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 126 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 182
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 183 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 242
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 243 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 302
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 303 TFNPHKRIEVEQALAHPYLEQY 324
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 67 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 117
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 118 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 174
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D + V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 175 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 234
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 235 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 294
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 295 TFNPHKRIEVEQALAHPYLEQY 316
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 206
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 265
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 266 LKDLLRNLLQ 275
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFXEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFXEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 140
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 198
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 257
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 258 LKDLLRNLLQ 267
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+ + + +P IV + V +G +V I + EGG + + IK+ PE++ +
Sbjct: 115 EELVACAGLSSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYY 171
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-IRLGDFGLAKMLISDDLASSVV---- 136
L Q L L YLH ILH DVK N+ L+ D L DFG A L D L S++
Sbjct: 172 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231
Query: 137 --GTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAP 194
GT ++M PE++ P +K DIWS C + M + + L KI
Sbjct: 232 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPI 291
Query: 195 LPTVYSGA--FRGLVKSMLRKNPEFRPSAAEL 224
S A ++ LRK P R SA EL
Sbjct: 292 REIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 323
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFXEPHARF--YA 140
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 198
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 199 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 257
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 258 LKDLLRNLLQ 267
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFAEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFXEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 206
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 265
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 266 LKDLLRNLLQ 275
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 206
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 265
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 266 LKDLLRNLLQ 275
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 206
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 265
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 266 LKDLLRNLLQ 275
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 186
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 247 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 277
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P AF ++ +R E RP A
Sbjct: 246 P-----AFMKKLQPTVRNYVENRPKYA 267
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 125 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 184
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 185 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 244
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 245 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 275
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 223
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 284 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 314
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFXEPHARF--YA 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 206
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 265
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 266 LKDLLRNLLQ 275
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 36/265 (13%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+ LK++RL + SA +E+ L+ +++ IV D + + ++ +C+ D
Sbjct: 29 IVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-LHSDKKLTLVFEFCDQ-D 86
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + NG PE + +L QLL L + H+ ++LHRD+K N+ + R+ +++L DF
Sbjct: 87 LKKYFDSCNGDLDPE-IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADF 145
Query: 121 GLAKML-ISDDLASSVVGTPSYMCPELLADIP-YGSKSDIWSLGCCVYEMS-AQKAAFKA 177
GLA+ I S+ V T Y P++L Y + D+WS GC E++ A + F
Sbjct: 146 GLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPG 205
Query: 178 FDMQALINKINK-----------------------------SIVAPLPTVYSGAFRGLVK 208
D+ + +I + S+V +P + + R L++
Sbjct: 206 NDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATG-RDLLQ 264
Query: 209 SMLRKNPEFRPSAAELLCHPHLQPY 233
++L+ NP R SA E L HP+ +
Sbjct: 265 NLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 246 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 276
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVPGGEMFSHLRRIGRFSEPHARF--YA 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 206
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 265
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 266 LKDLLRNLLQ 275
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 96/212 (45%), Gaps = 12/212 (5%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+ + + +P IV + V +G +V I + EGG + + IK+ PE++ +
Sbjct: 113 EELVACAGLSSPRIVPLYGA-VREGPWVNIFMELLEGGSLGQLIKQMG--CLPEDRALYY 169
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-IRLGDFGLAKMLISDDLASSVV---- 136
L Q L L YLH ILH DVK N+ L+ D L DFG A L D L S++
Sbjct: 170 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
Query: 137 --GTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAP 194
GT ++M PE++ P +K DIWS C + M + + L KI
Sbjct: 230 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPI 289
Query: 195 LPTVYSGA--FRGLVKSMLRKNPEFRPSAAEL 224
S A ++ LRK P R SA EL
Sbjct: 290 REIPPSCAPLTAQAIQEGLRKEPVHRASAMEL 321
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 93/183 (50%), Gaps = 6/183 (3%)
Query: 30 VRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMAL 89
V PF+V+ + S+ + + +++ Y GG+M +++ P + + Q+++
Sbjct: 99 VNFPFLVKLEFSFKDNSN-LYMVLEYAPGGEMFSHLRRIGRFSEPHARF--YAAQIVLTF 155
Query: 90 NYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD 149
YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+ PE++
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV--KGRTWXLCGTPEYLAPEIILS 213
Query: 150 IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKS 209
Y D W+LG +YEM+A F A + KI V P+ +S + L+++
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSDLKDLLRN 272
Query: 210 MLR 212
+L+
Sbjct: 273 LLQ 275
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 9/224 (4%)
Query: 5 KKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEA 64
+KIR + RR E++ + R+P I++ + + +++ Y GG++ +
Sbjct: 52 QKIRSLDVVGKIRR----EIQNLKLFRHPHIIKLYQV-ISTPSDIFMVMEYVSGGELFDY 106
Query: 65 IKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAK 124
I K NG E++ + Q+L ++Y H + ++HRD+K N+ L + ++ DFGL+
Sbjct: 107 ICK-NG-RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN 164
Query: 125 MLISDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL 183
M+ + G+P+Y PE+++ Y G + DIWS G +Y + F + L
Sbjct: 165 MMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL 224
Query: 184 INKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
KI I P + + L+K ML+ +P R + ++ H
Sbjct: 225 FKKICDGIFYT-PQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 246 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 276
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 5/149 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 164 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 223
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P F ++ +R E RP A L
Sbjct: 284 P-----EFMKKLQPTVRNYVENRPKYAGL 307
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 186
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 247 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 277
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 6 KIRLARQTDR--ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
K R +R + R +R +E+ ++ +V + ++ D + E V +I+ GG++ +
Sbjct: 46 KKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY-ENRTDVVLILELVSGGELFD 104
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-----RLG 118
+ + + EE+ ++ Q+L +NYLH I H D+K NI L D++I +L
Sbjct: 105 FLAQKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLI 161
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGLA + ++ GTP ++ PE++ P G ++D+WS+G Y + + + F
Sbjct: 162 DFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 179 DMQ---ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
Q A I ++ + S + ++ +L K R + E L HP + P
Sbjct: 222 TKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 119 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 178
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 239 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 269
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 103/221 (46%), Gaps = 7/221 (3%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
+ + +E++ +S +R+P +V D++ E + +I + GG++ E + + E+
Sbjct: 92 KETVRKEIQTMSVLRHPTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHN-KMSED 149
Query: 77 KLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT--RDQDIRLGDFGLAKMLISDDLASS 134
+ +++ Q+ L ++H N+ +H D+K NI T R +++L DFGL L
Sbjct: 150 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 209
Query: 135 VVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAP 194
GT + PE+ P G +D+WS+G Y + + + F + + +
Sbjct: 210 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 269
Query: 195 LPTVYSGA---FRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
+ +SG + ++ +L +P R + + L HP L P
Sbjct: 270 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 310
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 6 KIRLARQTDR--ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
K R +R + R +R +E+ ++ +V + ++ D + E V +I+ GG++ +
Sbjct: 46 KKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY-ENRTDVVLILELVSGGELFD 104
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-----RLG 118
+ + + EE+ ++ Q+L +NYLH I H D+K NI L D++I +L
Sbjct: 105 FLAQKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLI 161
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGLA + ++ GTP ++ PE++ P G ++D+WS+G Y + + + F
Sbjct: 162 DFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 179 DMQ---ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
Q A I ++ + S + ++ +L K R + E L HP + P
Sbjct: 222 TKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 134
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + I++ DFG AK + + GTP Y+
Sbjct: 135 AQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 192
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 193 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 251
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 252 LKDLLRNLLQ 261
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 6 KIRLARQTDR--ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
K R +R + R +R +E+ ++ +V + ++ D + E V +I+ GG++ +
Sbjct: 46 KKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY-ENRTDVVLILELVSGGELFD 104
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-----RLG 118
+ + + EE+ ++ Q+L +NYLH I H D+K NI L D++I +L
Sbjct: 105 FLAQKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLI 161
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGLA + ++ GTP ++ PE++ P G ++D+WS+G Y + + + F
Sbjct: 162 DFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 179 DMQ---ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
Q A I ++ + S + ++ +L K R + E L HP + P
Sbjct: 222 TKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 179
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 240 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 270
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 179
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM K F D NK+ + + P
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
P F ++ +R E RP A L P L P
Sbjct: 240 P-----EFMKKLQPTVRNYVENRPKYAG-LTFPKLFP 270
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 1 MYVLKKIRLARQT---DRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCE 57
+ +KKI+L ++ D R+A +E++L+ + +P I+ D++ K + ++ + E
Sbjct: 37 IVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN-ISLVFDFME 95
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
E I K N + + +++ L L YLH + ILHRD+K +N+ L + ++L
Sbjct: 96 TD--LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKL 153
Query: 118 GDFGLAKMLISDDLA-SSVVGTPSYMCPELLADI-PYGSKSDIWSLGCCVYEM 168
DFGLAK S + A V T Y PELL YG D+W++GC + E+
Sbjct: 154 ADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 35/197 (17%)
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD- 130
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D
Sbjct: 124 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 131 ---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF------ 178
+ V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 243
Query: 179 -----------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSMLRKNPE 216
D+ +IN ++ + LP ++ F L+ ML NP
Sbjct: 244 ILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPH 303
Query: 217 FRPSAAELLCHPHLQPY 233
R + L HP+L+ Y
Sbjct: 304 KRIEVEQALAHPYLEQY 320
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 30 VRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMAL 89
+R+P IV +K+ + ++ I++ Y GG++ E I N F E++ + QL+ +
Sbjct: 72 LRHPNIVRFKEV-ILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGV 128
Query: 90 NYLHANHILHRDVKCSNIFLTRDQDIRL--GDFGLAKMLISDDLASSVVGTPSYMCPELL 147
+Y HA + HRD+K N L RL DFG +K + S VGTP+Y+ PE+L
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVL 188
Query: 148 ADIPY-GSKSDIWSLGCCVYEMSAQKAAFKA----FDMQALINKI-NKSIVAPLPTVYSG 201
Y G +D+WS G +Y M F+ + + I++I N P S
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCH 227
R L+ + +P R S E+ H
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 71 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 121
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 122 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 179 DPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 239 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 298
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 299 TFNPHKRIEVEQALAHPYLEQY 320
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 103/234 (44%), Gaps = 10/234 (4%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
Y K I + + R + +E + +++ IV DS E+G + ++ GG++
Sbjct: 32 YAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHY-LVFDLVTGGEL 90
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT---RDQDIRLG 118
E I ++ E + Q+L A+ + H ++HRD+K N+ L + ++L
Sbjct: 91 FEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLA 148
Query: 119 DFGLAKMLISDDLAS-SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA 177
DFGLA + D A GTP Y+ PE+L YG DIW+ G +Y + F
Sbjct: 149 DFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWD 208
Query: 178 FDMQALINKINKSIV---APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHP 228
D L +I +P + + L+ ML NP R +A E L HP
Sbjct: 209 EDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHP 262
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 48/262 (18%)
Query: 8 RLARQTDRARRSAHQEMELISRV-RNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
R R+ R H+ + I+ + R P I + KD + I+ D+ + +K
Sbjct: 72 RTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY---------IVQDLMETDLYKLLK 122
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++
Sbjct: 123 TQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 179
Query: 127 ISDD----LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF- 178
D V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 180 DPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 239
Query: 179 ----------------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSML 211
D+ +IN ++ + LP ++ F L+ ML
Sbjct: 240 DQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKML 299
Query: 212 RKNPEFRPSAAELLCHPHLQPY 233
NP R + L HP+L+ Y
Sbjct: 300 TFNPHKRIEVEQALAHPYLEQY 321
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 6 KIRLARQTDR--ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
K R +R + R +R +E+ ++ +V + ++ D + E V +I+ GG++ +
Sbjct: 46 KKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY-ENRTDVVLILELVSGGELFD 104
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-----RLG 118
+ + + EE+ ++ Q+L +NYLH I H D+K NI L D++I +L
Sbjct: 105 FLAQKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLI 161
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGLA + ++ GTP ++ PE++ P G ++D+WS+G Y + + + F
Sbjct: 162 DFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 179 DMQ---ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
Q A I ++ + S + ++ +L K R + E L HP + P
Sbjct: 222 TKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 42/264 (15%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-----VEKGCYVCIIIGYCEG 58
+KK+ Q++ + A++E+ L+ +R+ ++ D + ++ +++ + G
Sbjct: 55 IKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-G 113
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
D+ + +K E+++ + Q+L L Y+HA I+HRD+K N+ + D ++++
Sbjct: 114 TDLGKLMKHEK---LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKIL 170
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKA 177
DFGLA+ +D V T Y PE++ + + Y DIWS+GC + EM K FK
Sbjct: 171 DFGLARQ--ADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228
Query: 178 FDMQALINKINKSIVAP-------------------LPTVYSGAFR-----------GLV 207
D + +I K P LP + F L+
Sbjct: 229 SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLL 288
Query: 208 KSMLRKNPEFRPSAAELLCHPHLQ 231
+ ML + E R +A E L HP+ +
Sbjct: 289 EKMLVLDAEQRVTAGEALAHPYFE 312
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 113/237 (47%), Gaps = 14/237 (5%)
Query: 6 KIRLARQTDR--ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
K R +R + R +R +E+ ++ +V + ++ D + E V +I+ GG++ +
Sbjct: 46 KKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY-ENRTDVVLILELVSGGELFD 104
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-----RLG 118
+ + + EE+ ++ Q+L +NYLH I H D+K NI L D++I +L
Sbjct: 105 FLAQKESL--SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLI 161
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGLA + ++ GTP ++ PE++ P G ++D+WS+G Y + + + F
Sbjct: 162 DFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
Query: 179 DMQ---ALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
Q A I ++ + S + ++ +L K R + E L HP + P
Sbjct: 222 TKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITP 278
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 13/213 (6%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ ++SRV + I++ D + +G + ++ + G D+ I + + +E L ++
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRL---DEPLASYI 135
Query: 83 V-QLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
QL+ A+ YL I+HRD+K NI + D I+L DFG A L L + GT Y
Sbjct: 136 FRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEY 195
Query: 142 MCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYS 200
PE+L PY G + ++WSLG +Y + ++ F + + ++ + P P + S
Sbjct: 196 CAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF------CELEETVEAAIHP-PYLVS 248
Query: 201 GAFRGLVKSMLRKNPEFRPSAAELLCHPHL-QP 232
LV +L+ PE R + +L+ P + QP
Sbjct: 249 KELMSLVSGLLQPVPERRTTLEKLVTDPWVTQP 281
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 103/221 (46%), Gaps = 7/221 (3%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
+ + +E++ +S +R+P +V D++ E + +I + GG++ E + + E+
Sbjct: 198 KETVRKEIQTMSVLRHPTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHN-KMSED 255
Query: 77 KLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT--RDQDIRLGDFGLAKMLISDDLASS 134
+ +++ Q+ L ++H N+ +H D+K NI T R +++L DFGL L
Sbjct: 256 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 315
Query: 135 VVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAP 194
GT + PE+ P G +D+WS+G Y + + + F + + +
Sbjct: 316 TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNM 375
Query: 195 LPTVYSGA---FRGLVKSMLRKNPEFRPSAAELLCHPHLQP 232
+ +SG + ++ +L +P R + + L HP L P
Sbjct: 376 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTP 416
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 96/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +Y+M+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 100/193 (51%), Gaps = 12/193 (6%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
M +L K + +++D A +E ++++ +P++V+ ++ + Y+ +++ Y GGD
Sbjct: 105 MKLLSKFEMIKRSDSA--FFWEERDIMAFANSPWVVQLFCAF-QDDKYLYMVMEYMPGGD 161
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + + PE+ + ++++AL+ +H+ ++HRDVK N+ L + ++L DF
Sbjct: 162 LVNLMSNYD---VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADF 218
Query: 121 GLAKMLISDDLA--SSVVGTPSYMCPELL----ADIPYGSKSDIWSLGCCVYEMSAQKAA 174
G + + + VGTP Y+ PE+L D YG + D WS+G ++EM
Sbjct: 219 GTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
Query: 175 FKAFDMQALINKI 187
F A + +KI
Sbjct: 279 FYADSLVGTYSKI 291
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 35/197 (17%)
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD- 130
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D
Sbjct: 122 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 181
Query: 131 ---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF--KAF------ 178
+ V T Y PE++ + +KS DIWS+GC + EM + + F K +
Sbjct: 182 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 241
Query: 179 -----------DMQALINKINKSIVAPLP----TVYSGAF-------RGLVKSMLRKNPE 216
D+ +IN ++ + LP ++ F L+ ML NP
Sbjct: 242 ILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPH 301
Query: 217 FRPSAAELLCHPHLQPY 233
R + L HP+L Y
Sbjct: 302 KRIEVEQALAHPYLAQY 318
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 37/261 (14%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
+KK + ++ A +E+ ++ ++++P +V + + K + ++ YC+ + E
Sbjct: 33 IKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR-RLHLVFEYCDHTVLHE 91
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
+ GV PE + Q L A+N+ H ++ +HRDVK NI +T+ I+L DFG A
Sbjct: 92 LDRYQRGV--PEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFA 149
Query: 124 KMLIS-DDLASSVVGTPSYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAFKA---F 178
++L D V T Y PELL D YG D+W++GC E+ + +
Sbjct: 150 RLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV 209
Query: 179 DMQALINKINKSIV------------------------APL----PTVYSGAFRGLVKSM 210
D LI K ++ PL P + A GL+K
Sbjct: 210 DQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPAL-GLLKGC 268
Query: 211 LRKNPEFRPSAAELLCHPHLQ 231
L +P R + +LL HP+ +
Sbjct: 269 LHMDPTERLTCEQLLHHPYFE 289
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+ + + S+ + + +++ Y GG+M +++ P + +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGRFXEPHARF--YA 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYL 206
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 265
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 266 LKDLLRNLLQ 275
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+ + + S+ + + +++ Y GG+M +++ P + +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YA 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYL 206
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 265
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 266 LKDLLRNLLQ 275
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 131 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 190
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y D+WS+GC + EM K F D NK+ + + P
Sbjct: 191 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 250
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 251 P-----EFMKKLQPTVRTYVENRPKYA 272
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+ + + S+ + + +++ Y GG+M +++ P + +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSN-LYMVMEYAPGGEMFSHLRRIGRFSEPHARF--YA 148
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYL 206
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 265
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 266 LKDLLRNLLQ 275
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L+ + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 246 P-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ ++ + +
Sbjct: 124 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPY 183
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + E+ F+ D NK+ + + P
Sbjct: 184 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP- 242
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPS 220
S F ++ +R E RP+
Sbjct: 243 ----SAEFMAALQPTVRNYVENRPA 263
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ ++ + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y + DIWS+GC + E+ F+ D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP- 244
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRP 219
S F ++ +R E RP
Sbjct: 245 ----SAEFMAALQPTVRNYVENRP 264
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 37/198 (18%)
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD- 130
H + +C +L Q+L L Y+H+ ++LHRD+K SN+ L D+++ DFGLA++ D
Sbjct: 122 HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHD 181
Query: 131 ---LASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAFKAFDMQALINK 186
+ V T Y PE++ + +KS DIWS+GC + EM + + F +N
Sbjct: 182 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 241
Query: 187 INKSIVAP-------------------------------LPTVYSGAFRGLVKSMLRKNP 215
I + +P P S A L+ ML NP
Sbjct: 242 ILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLLDKMLTFNP 300
Query: 216 EFRPSAAELLCHPHLQPY 233
R + L HP+L Y
Sbjct: 301 HKRIEVEQALAHPYLAQY 318
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E+ ++ + +P IV+ ++ EK Y +++ Y GG++ + + A+G +E K
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLY--LVMEYASGGEVFDYLV-AHGRMKEKEARAK 118
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPS 140
+ Q++ A+ Y H I+HRD+K N+ L D +I++ DFG + + + G+P
Sbjct: 119 FR-QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP 177
Query: 141 YMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
Y PEL Y G + D+WSLG +Y + + F +++ L ++ + +P
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYM 236
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELL 225
S L+K L NP R + +++
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E+ ++ + +P IV+ ++ EK Y +++ Y GG++ + + A+G +E K
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLY--LVMEYASGGEVFDYLV-AHGRMKEKEARAK 118
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPS 140
+ Q++ A+ Y H I+HRD+K N+ L D +I++ DFG + + + G+P
Sbjct: 119 FR-QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP 177
Query: 141 YMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
Y PEL Y G + D+WSLG +Y + + F +++ L ++ + +P
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYM 236
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELL 225
S L+K L NP R + +++
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E+ ++ + +P IV+ ++ EK Y +++ Y GG++ + + A+G +E K
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLY--LVMEYASGGEVFDYLV-AHGRMKEKEARAK 118
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPS 140
+ Q++ A+ Y H I+HRD+K N+ L D +I++ DFG + + + G+P
Sbjct: 119 FR-QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP 177
Query: 141 YMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
Y PEL Y G + D+WSLG +Y + + F +++ L ++ + +P
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYM 236
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELL 225
S L+K L NP R + +++
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 120 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 179
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y D+WS+GC + EM K F D NK+ + + P
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 240 P-----EFMKKLQPTVRTYVENRPKYA 261
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 105/219 (47%), Gaps = 13/219 (5%)
Query: 19 SAHQEMELISR--VRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
+A+ + E+I+ +R+P IV +K+ + ++ I++ Y GG++ E I N F E+
Sbjct: 59 AANVKREIINHRSLRHPNIVRFKEV-ILTPTHLAIVMEYASGGELFERI--CNAGRFSED 115
Query: 77 KLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG--DFGLAKMLISDDLASS 134
+ + QL+ ++Y HA + HRD+K N L RL DFG +K + S
Sbjct: 116 EARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS 175
Query: 135 VVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKA----FDMQALINKI-N 188
VGTP+Y+ PE+L Y G +D+WS G +Y M F+ + + I++I N
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
P S R L+ + +P R S E+ H
Sbjct: 236 VQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%), Gaps = 36/265 (13%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+ LK++RL + SA +E+ L+ +++ IV D + + ++ +C+ D
Sbjct: 29 IVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-LHSDKKLTLVFEFCDQ-D 86
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ + NG PE + +L QLL L + H+ ++LHRD+K N+ + R+ +++L +F
Sbjct: 87 LKKYFDSCNGDLDPE-IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANF 145
Query: 121 GLAKML-ISDDLASSVVGTPSYMCPELLADIP-YGSKSDIWSLGCCVYEMS-AQKAAFKA 177
GLA+ I S+ V T Y P++L Y + D+WS GC E++ A + F
Sbjct: 146 GLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205
Query: 178 FDMQALINKINK-----------------------------SIVAPLPTVYSGAFRGLVK 208
D+ + +I + S+V +P + + R L++
Sbjct: 206 NDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATG-RDLLQ 264
Query: 209 SMLRKNPEFRPSAAELLCHPHLQPY 233
++L+ NP R SA E L HP+ +
Sbjct: 265 NLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP Y+
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEYL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
P ++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 10/217 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ ++ ++ +P I++ + + +K Y ++ Y GG++ + I F E +
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVY-RGGELFDEIILRQ--KFSEVDAAVIM 127
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLGDFGLAKMLISDDLASSVVGTP 139
Q+L YLH ++I+HRD+K N+ L +RD I++ DFGL+ +GT
Sbjct: 128 KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 187
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINK---SIVAPLP 196
Y+ PE+L Y K D+WS G +Y + F Q ++ ++ K S P
Sbjct: 188 YYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDW 246
Query: 197 TVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
T S + LVK ML P R SA E L HP + +
Sbjct: 247 TQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKF 283
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 10/217 (4%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+ ++ ++ +P I++ + + +K Y ++ Y GG++ + I F E +
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVY-RGGELFDEIILRQ--KFSEVDAAVIM 110
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFL---TRDQDIRLGDFGLAKMLISDDLASSVVGTP 139
Q+L YLH ++I+HRD+K N+ L +RD I++ DFGL+ +GT
Sbjct: 111 KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 170
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINK---SIVAPLP 196
Y+ PE+L Y K D+WS G +Y + F Q ++ ++ K S P
Sbjct: 171 YYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDW 229
Query: 197 TVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
T S + LVK ML P R SA E L HP + +
Sbjct: 230 TQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKF 266
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + A+ F +KL Q ++YLHA I+HRD+K +NIF
Sbjct: 82 LAIVTQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 140
Query: 109 LTRDQDIRLGDFGLAKM---LISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 141 LHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 200
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSGA---FRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S + L+ L+K +
Sbjct: 201 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDE 260
Query: 218 RPSAAELLC 226
RPS +L
Sbjct: 261 RPSFPRILA 269
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E+ ++ + +P IV+ ++ EK Y +++ Y GG++ + + A+G +E K
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLY--LVMEYASGGEVFDYLV-AHGRMKEKEARAK 118
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPS 140
+ Q++ A+ Y H I+HRD+K N+ L D +I++ DFG + + G+P
Sbjct: 119 FR-QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPP 177
Query: 141 YMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
Y PEL Y G + D+WSLG +Y + + F +++ L ++ + +P
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYM 236
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELL 225
S L+K L NP R + +++
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 30 VRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMAL 89
+R+P IV +K+ + ++ II+ Y GG++ E I N F E++ + QLL +
Sbjct: 73 LRHPNIVRFKEV-ILTPTHLAIIMEYASGGELYERI--CNAGRFSEDEARFFFQQLLSGV 129
Query: 90 NYLHANHILHRDVKCSNIFLTRDQDIRLG--DFGLAKMLISDDLASSVVGTPSYMCPELL 147
+Y H+ I HRD+K N L RL DFG +K + S VGTP+Y+ PE+L
Sbjct: 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 189
Query: 148 ADIPYGSK-SDIWSLGCCVYEMSAQKAAFK 176
Y K +D+WS G +Y M F+
Sbjct: 190 LRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E+ ++ + +P IV+ ++ EK Y +++ Y GG++ + + A+G +E K
Sbjct: 62 REVRIMKVLNHPNIVKLFEVIETEKTLY--LVMEYASGGEVFDYLV-AHGRMKEKEARAK 118
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPS 140
+ Q++ A+ Y H I+HRD+K N+ L D +I++ DFG + + + G P
Sbjct: 119 FR-QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPP 177
Query: 141 YMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
Y PEL Y G + D+WSLG +Y + + F +++ L ++ + +P
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYM 236
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELL 225
S L+K L NP R + +++
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 2 YVLKKIRLARQTDR----ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCE 57
Y L K ++A +T R + +E E++ ++ +P +V+ +E+ +C++ + E
Sbjct: 30 YWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-ICLVFEFME 88
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
G +++ ++ G+ F E L + + + YL ++HRD+ N + +Q I++
Sbjct: 89 HGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 147
Query: 118 GDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFG+ + ++ D SS GT + PE+ + Y SKSD+WS G ++E+ S K
Sbjct: 148 SDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 206
Query: 174 AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ ++ I+ P + S ++ R+ PE RP+ + LL
Sbjct: 207 PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLL 258
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 30 VRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMAL 89
+R+P IV +K+ + ++ I++ Y GG++ E I N F E++ + QL+ +
Sbjct: 71 LRHPNIVRFKEV-ILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGV 127
Query: 90 NYLHANHILHRDVKCSNIFLTRDQDIRLG--DFGLAKMLISDDLASSVVGTPSYMCPELL 147
+Y HA + HRD+K N L RL DFG +K + S VGTP+Y+ PE+L
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVL 187
Query: 148 ADIPY-GSKSDIWSLGCCVYEMSAQKAAFKA----FDMQALINKI-NKSIVAPLPTVYSG 201
Y G +D+WS G +Y M F+ + + I++I N P S
Sbjct: 188 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 247
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCH 227
R L+ + +P R S E+ H
Sbjct: 248 ECRHLISRIFVADPAKRISIPEIRNH 273
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 246 P-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E+ ++ + +P IV+ ++ EK Y +++ Y GG++ + + A+G +E K
Sbjct: 55 REVRIMKVLNHPNIVKLFEVIETEKTLY--LVMEYASGGEVFDYLV-AHGWMKEKEARAK 111
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPS 140
+ Q++ A+ Y H I+HRD+K N+ L D +I++ DFG + + + G+P
Sbjct: 112 FR-QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP 170
Query: 141 YMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
Y PEL Y G + D+WSLG +Y + + F +++ L ++ + +P
Sbjct: 171 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYM 229
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELL 225
S L+K L NP R + +++
Sbjct: 230 STDCENLLKKFLILNPSKRGTLEQIM 255
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPE 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y D+WS+GC + EM K F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 246 P-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 246 P-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 2 YVLKKIRLARQTDR----ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCE 57
Y L K ++A +T R + +E E++ ++ +P +V+ +E+ +C++ + E
Sbjct: 28 YWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-ICLVTEFME 86
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
G +++ ++ G+ F E L + + + YL ++HRD+ N + +Q I++
Sbjct: 87 HGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 145
Query: 118 GDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFG+ + ++ D SS GT + PE+ + Y SKSD+WS G ++E+ S K
Sbjct: 146 SDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 204
Query: 174 AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ ++ I+ P + S ++ R+ PE RP+ + LL
Sbjct: 205 PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLL 256
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 2 YVLKKIRLARQTDR----ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCE 57
Y L K ++A +T R + +E E++ ++ +P +V+ +E+ +C++ + E
Sbjct: 27 YWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-ICLVFEFME 85
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
G +++ ++ G+ F E L + + + YL ++HRD+ N + +Q I++
Sbjct: 86 HGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKV 144
Query: 118 GDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFG+ + ++ D SS GT + PE+ + Y SKSD+WS G ++E+ S K
Sbjct: 145 SDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
Query: 174 AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ ++ I+ P + S ++ ++ PE RP+ + LL
Sbjct: 204 PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLL 255
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 133 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 189
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 190 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
Query: 171 QKAAFKAFDMQALINKINK-------SIVAPLPT----------------VYSGAFRG-- 205
+ F D + +I + S+++ +P+ ++ F G
Sbjct: 248 GRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGAN 307
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +A+E L HP+ Y
Sbjct: 308 PLAVDLLEKMLVLDTDKRITASEALAHPYFSQY 340
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 47 CYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLC-KWLVQLLMALNYLHANHILHRDVKCS 105
Y+ I + C ++ + + + + E +C +Q+ A+ +LH+ ++HRD+K S
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPS 193
Query: 106 NIFLTRDQDIRLGDFGLAKMLISDDLASSV-------------VGTPSYMCPELLADIPY 152
NIF T D +++GDFGL + D+ +V VGT YM PE + Y
Sbjct: 194 NIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNY 253
Query: 153 GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV-APLPTVYSGAF---RGLVK 208
K DI+SLG ++E+ +F Q +I + P +++ + +V+
Sbjct: 254 SHKVDIFSLGLILFEL------LYSFSTQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQ 307
Query: 209 SMLRKNPEFRPSAAELL 225
ML +P RP A +++
Sbjct: 308 DMLSPSPTERPEATDII 324
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVE 44
Y +K+IRL + + AR +E++ ++++ +P IV Y ++W+E
Sbjct: 34 YAIKRIRLPNR-ELAREKVMREVKALAKLEHPGIVRYFNAWLE 75
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E+ ++ + +P IV+ ++ EK Y +I+ Y GG++ + + A+G +E K
Sbjct: 60 REVRIMKILNHPNIVKLFEVIETEKTLY--LIMEYASGGEVFDYLV-AHGRMKEKEARSK 116
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPS 140
+ Q++ A+ Y H I+HRD+K N+ L D +I++ DFG + + G+P
Sbjct: 117 FR-QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPP 175
Query: 141 YMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
Y PEL Y G + D+WSLG +Y + + F +++ L ++ + +P
Sbjct: 176 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYM 234
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELL 225
S L+K L NP R + +++
Sbjct: 235 STDCENLLKRFLVLNPIKRGTLEQIM 260
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E ++ V PF+V+ + S+ + + +++ Y GG+M +++ P + +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSN-LYMVMEYVAGGEMFSHLRRIGRFSEPHARF--YA 147
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q+++ YLH+ +++RD+K N+ + + I++ DFG AK + + GTP +
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV--KGRTWXLCGTPEAL 205
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA 202
PE++ Y D W+LG +YEM+A F A + KI V P+ +S
Sbjct: 206 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVR-FPSHFSSD 264
Query: 203 FRGLVKSMLR 212
+ L++++L+
Sbjct: 265 LKDLLRNLLQ 274
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + A+ F +KL Q ++YLHA I+HRD+K +NIF
Sbjct: 94 LAIVTQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 152
Query: 109 LTRDQDIRLGDFGLA---KMLISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + G+ +M PE++ PY +SD+++ G
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSGA---FRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S + L+ L+K +
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDE 272
Query: 218 RPSAAELLC 226
RPS +L
Sbjct: 273 RPSFPRILA 281
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 89/178 (50%), Gaps = 4/178 (2%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+++ Y GG++ + I K V E + + Q+L A++Y H + ++HRD+K N+ L
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEAR--RLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMS 169
+ ++ DFGL+ M+ + + G+P+Y PE+++ Y G + DIWS G +Y +
Sbjct: 146 AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
Query: 170 AQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
F + L KI + +P + + L+ ML+ +P R + ++ H
Sbjct: 206 CGTLPFDDEHVPTLFKKIRGGVFY-IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + A+ F +KL Q ++YLHA I+HRD+K +NIF
Sbjct: 94 LAIVTQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIF 152
Query: 109 LTRDQDIRLGDFGLA---KMLISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + G+ +M PE++ PY +SD+++ G
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSGA---FRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S + L+ L+K +
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDE 272
Query: 218 RPSAAELLC 226
RPS +L
Sbjct: 273 RPSFPRILA 281
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 127 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 186
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM F D NK+ + + P
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 246
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 247 P-----EFMKKLQPTVRTYVENRPKYA 268
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + +ARR E+EL R P IV Y++ + + C + I++ +GG++
Sbjct: 54 LKMLQDCPKARR----EVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGEL 108
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLG 118
I+ F E + + + + A+ YLH+ +I HRDVK N+ T + ++L
Sbjct: 109 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 168
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFG AK S + ++ TP Y+ PE+L Y D+WSLG +Y + F +
Sbjct: 169 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 228
Query: 179 -------DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
M+ I P + S + L++++L+ P R + E + HP +
Sbjct: 229 HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + +ARR E+EL R P IV Y++ + + C + I++ +GG++
Sbjct: 52 LKMLQDCPKARR----EVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGEL 106
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLG 118
I+ F E + + + + A+ YLH+ +I HRDVK N+ T + ++L
Sbjct: 107 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 166
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFG AK S + ++ TP Y+ PE+L Y D+WSLG +Y + F +
Sbjct: 167 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 226
Query: 179 -------DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
M+ I P + S + L++++L+ P R + E + HP +
Sbjct: 227 HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + +ARR E+EL R P IV Y++ + + C + I++ +GG++
Sbjct: 53 LKMLQDCPKARR----EVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGEL 107
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLG 118
I+ F E + + + + A+ YLH+ +I HRDVK N+ T + ++L
Sbjct: 108 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 167
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFG AK S + ++ TP Y+ PE+L Y D+WSLG +Y + F +
Sbjct: 168 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 227
Query: 179 -------DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
M+ I P + S + L++++L+ P R + E + HP +
Sbjct: 228 HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 26/188 (13%)
Query: 59 GDMAEAIKKANGVH-FPEEKLCKWLVQLLMALNYLHANH--ILHRDVKCSNIFLTRDQDI 115
G + E +KK + + K Q A+ ++H I+HRD+K N+ L+ I
Sbjct: 118 GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTI 177
Query: 116 RLGDFGLA---------------KMLISDDLASSVVGTPSYMCPELL---ADIPYGSKSD 157
+L DFG A + L+ +++ + TP Y PE++ ++ P G K D
Sbjct: 178 KLCDFGSATTISHYPDYSWSAQRRALVEEEITRNT--TPMYRTPEIIDLYSNFPIGEKQD 235
Query: 158 IWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEF 217
IW+LGC +Y + ++ F+ ++N K + P T Y+ F L+++ML+ NPE
Sbjct: 236 IWALGCILYLLCFRQHPFEDGAKLRIVN--GKYSIPPHDTQYT-VFHSLIRAMLQVNPEE 292
Query: 218 RPSAAELL 225
R S AE++
Sbjct: 293 RLSIAEVV 300
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 246 P-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + +ARR E+EL R P IV Y++ + + C + I++ +GG++
Sbjct: 62 LKMLQDCPKARR----EVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGEL 116
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLG 118
I+ F E + + + + A+ YLH+ +I HRDVK N+ T + ++L
Sbjct: 117 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 176
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFG AK S + ++ TP Y+ PE+L Y D+WSLG +Y + F +
Sbjct: 177 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 236
Query: 179 -------DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
M+ I P + S + L++++L+ P R + E + HP +
Sbjct: 237 HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 103/209 (49%), Gaps = 6/209 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANG-VHFPEEKLCK 80
+E+ ++ R+R+P IV + + V + + I+ Y G + + K+ E +
Sbjct: 83 REVAIMKRLRHPNIVLFMGA-VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 81 WLVQLLMALNYLHANH--ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLAS-SVVG 137
+ +NYLH + I+HR++K N+ + + +++ DFGL+++ S L+S S G
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAG 201
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKIN-KSIVAPLP 196
TP +M PE+L D P KSD++S G ++E++ + + + ++ + K +P
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP 261
Query: 197 TVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ +++ P RPS A ++
Sbjct: 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 2 YVLKKIRLARQTDR----ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCE 57
Y L K ++A +T R + +E E++ ++ +P +V+ +E+ +C++ + E
Sbjct: 27 YWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-ICLVFEFME 85
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
G +++ ++ G+ F E L + + + YL ++HRD+ N + +Q I++
Sbjct: 86 HGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 144
Query: 118 GDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFG+ + ++ D SS GT + PE+ + Y SKSD+WS G ++E+ S K
Sbjct: 145 SDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
Query: 174 AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ ++ I+ P + S ++ ++ PE RP+ + LL
Sbjct: 204 PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLL 255
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 246 P-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + +
Sbjct: 128 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPF 187
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM F D NK+ + + P
Sbjct: 188 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 247
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 248 P-----EFMKKLQPTVRTYVENRPKYA 269
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 89/168 (52%), Gaps = 6/168 (3%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E+ ++ + +P IV+ ++ EK Y +++ Y GG++ + + A+G +E K
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLY--LVMEYASGGEVFDYLV-AHGRMKEKEARAK 119
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPS 140
+ Q++ A+ Y H +I+HRD+K N+ L D +I++ DFG + + + G+P
Sbjct: 120 FR-QIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPP 178
Query: 141 YMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKI 187
Y PEL Y G + D+WSLG +Y + + F +++ L ++
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + +ARR E+EL R P IV Y++ + + C + I++ +GG++
Sbjct: 48 LKMLQDCPKARR----EVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGEL 102
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLG 118
I+ F E + + + + A+ YLH+ +I HRDVK N+ T + ++L
Sbjct: 103 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 162
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFG AK S + ++ TP Y+ PE+L Y D+WSLG +Y + F +
Sbjct: 163 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 222
Query: 179 -------DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
M+ I P + S + L++++L+ P R + E + HP +
Sbjct: 223 HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + +ARR E+EL R P IV Y++ + + C + I++ +GG++
Sbjct: 98 LKMLQDCPKARR----EVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGEL 152
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLG 118
I+ F E + + + + A+ YLH+ +I HRDVK N+ T + ++L
Sbjct: 153 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 212
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFG AK S + ++ TP Y+ PE+L Y D+WSLG +Y + F +
Sbjct: 213 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 272
Query: 179 -------DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
M+ I P + S + L++++L+ P R + E + HP +
Sbjct: 273 HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 16/226 (7%)
Query: 20 AHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFP 74
A +E+EL R P IV Y++ + + C + I++ +GG++ I+ F
Sbjct: 101 ARREVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFT 159
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKMLISDDL 131
E + + + + A+ YLH+ +I HRDVK N+ T + ++L DFG AK S +
Sbjct: 160 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS 219
Query: 132 ASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF-------DMQALI 184
++ TP Y+ PE+L Y D+WSLG +Y + F + M+ I
Sbjct: 220 LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 279
Query: 185 NKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
P + S + L++++L+ P R + E + HP +
Sbjct: 280 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + +ARR E+EL R P IV Y++ + + C + I++ +GG++
Sbjct: 47 LKMLQDCPKARR----EVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGEL 101
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLG 118
I+ F E + + + + A+ YLH+ +I HRDVK N+ T + ++L
Sbjct: 102 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 161
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFG AK S + ++ TP Y+ PE+L Y D+WSLG +Y + F +
Sbjct: 162 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 221
Query: 179 -------DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
M+ I P + S + L++++L+ P R + E + HP +
Sbjct: 222 HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 2 YVLKKIRLARQTDR----ARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCE 57
Y L K ++A +T R + +E E++ ++ +P +V+ +E+ +C++ + E
Sbjct: 25 YWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-ICLVFEFME 83
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
G +++ ++ G+ F E L + + + YL ++HRD+ N + +Q I++
Sbjct: 84 HGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 142
Query: 118 GDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFG+ + ++ D SS GT + PE+ + Y SKSD+WS G ++E+ S K
Sbjct: 143 SDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 201
Query: 174 AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ ++ I+ P + S ++ ++ PE RP+ + LL
Sbjct: 202 PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLL 253
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPE 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 246 P-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + +ARR E+EL R P IV Y++ + + C + I++ +GG++
Sbjct: 46 LKMLQDCPKARR----EVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGEL 100
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLG 118
I+ F E + + + + A+ YLH+ +I HRDVK N+ T + ++L
Sbjct: 101 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 160
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFG AK S + ++ TP Y+ PE+L Y D+WSLG +Y + F +
Sbjct: 161 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 220
Query: 179 -------DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
M+ I P + S + L++++L+ P R + E + HP +
Sbjct: 221 HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+GC + EM F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 246 P-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 88/178 (49%), Gaps = 4/178 (2%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+++ Y GG++ + I K V E + + Q+L A++Y H + ++HRD+K N+ L
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEAR--RLFQQILSAVDYCHRHMVVHRDLKPENVLLD 145
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMS 169
+ ++ DFGL+ M+ + G+P+Y PE+++ Y G + DIWS G +Y +
Sbjct: 146 AHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL 205
Query: 170 AQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
F + L KI + +P + + L+ ML+ +P R + ++ H
Sbjct: 206 CGTLPFDDEHVPTLFKKIRGGVFY-IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 20/239 (8%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + +ARR E+EL R P IV Y++ + + C + I++ +GG++
Sbjct: 48 LKMLQDCPKARR----EVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGEL 102
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLG 118
I+ F E + + + + A+ YLH+ +I HRDVK N+ T + ++L
Sbjct: 103 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 162
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFG AK S + ++ TP Y+ PE+L Y D+WSLG +Y + F +
Sbjct: 163 DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 222
Query: 179 -------DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
M+ I P + S + L++++L+ P R + E + HP +
Sbjct: 223 HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 85/211 (40%), Gaps = 39/211 (18%)
Query: 70 GVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML-IS 128
G+ K +W QLL L + H N ILHRD+K N+ + + ++LGDFGLA+ I
Sbjct: 104 GLELNLVKYFQW--QLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161
Query: 129 DDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA---------- 177
+ SS V T Y P+ L+ Y + DIWS GC + EM K F
Sbjct: 162 VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
Query: 178 FDMQALINKINKSIVAPLPTV-----------------------YSGAFRGLVKSMLRKN 214
FD+ N+ V LP G + +L+ N
Sbjct: 222 FDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLN 281
Query: 215 PEFRPSAAELLCHPHLQPYVLGIHLKLNGPR 245
P+ R SA + L HP Y H + G R
Sbjct: 282 PDMRLSAKQALHHPWFAEYY--HHASMGGSR 310
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 7/205 (3%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E+ + + +P IV+ ++ EK Y ++ Y GG++ + + A+G +E K
Sbjct: 62 REVRIXKVLNHPNIVKLFEVIETEKTLY--LVXEYASGGEVFDYLV-AHGRXKEKEARAK 118
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPS 140
+ Q++ A+ Y H I+HRD+K N+ L D +I++ DFG + + + G P
Sbjct: 119 FR-QIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPP 177
Query: 141 YMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
Y PEL Y G + D+WSLG +Y + + F +++ L ++ + +P
Sbjct: 178 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR-IPFYX 236
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAEL 224
S L+K L NP R + ++
Sbjct: 237 STDCENLLKKFLILNPSKRGTLEQI 261
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 114/239 (47%), Gaps = 22/239 (9%)
Query: 23 EMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWL 82
E+E + +R+ I + +E + +++ YC GG++ + I + + E ++
Sbjct: 58 EIEALKNLRHQHICQLYHV-LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVV--F 114
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGL-AKMLISDDL-ASSVVGTPS 140
Q++ A+ Y+H+ HRD+K N+ ++L DFGL AK + D + G+ +
Sbjct: 115 RQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 141 YMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
Y PEL+ Y GS++D+WS+G +Y + F ++ AL KI + +P
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRG-KYDVPKWL 233
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLCHPH-LQPYVLGIHLKLNGPRRNTFPLEWSDSN 257
S + L++ ML+ +P+ R S LL HP +Q Y +P+EW N
Sbjct: 234 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDY--------------NYPVEWQSKN 278
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 7/206 (3%)
Query: 22 QEMELISRVRNPFIVE-YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK 80
+E+ ++ + +P IV+ ++ EK Y +I+ Y GG++ + + A+G +E K
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLY--LIMEYASGGEVFDYLV-AHGRMKEKEARSK 119
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPS 140
+ Q++ A+ Y H I+HRD+K N+ L D +I++ DFG + + G P
Sbjct: 120 FR-QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPP 178
Query: 141 YMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
Y PEL Y G + D+WSLG +Y + + F +++ L ++ + +P
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-KYRIPFYM 237
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELL 225
S L+K L NP R + +++
Sbjct: 238 STDCENLLKRFLVLNPIKRGTLEQIM 263
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 6/209 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANG-VHFPEEKLCK 80
+E+ ++ R+R+P IV + + V + + I+ Y G + + K+ E +
Sbjct: 83 REVAIMKRLRHPNIVLFMGA-VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 81 WLVQLLMALNYLHANH--ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASS-VVG 137
+ +NYLH + I+HRD+K N+ + + +++ DFGL+++ S L S G
Sbjct: 142 MAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAG 201
Query: 138 TPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKIN-KSIVAPLP 196
TP +M PE+L D P KSD++S G ++E++ + + + ++ + K +P
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP 261
Query: 197 TVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ +++ P RPS A ++
Sbjct: 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIM 290
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 86/184 (46%), Gaps = 32/184 (17%)
Query: 80 KWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS-DDLASSVVGT 138
K+L Q++ + + H+++I+HRD+K NI +++ ++L DFG A+ L + ++ V T
Sbjct: 128 KYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVAT 187
Query: 139 PSYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAFKA---FD-----MQALINKI-- 187
Y PELL D+ YG D+W++GC V EM + F D M L N I
Sbjct: 188 RWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPR 247
Query: 188 -----NKSIV------------APLPTVY---SGAFRGLVKSMLRKNPEFRPSAAELLCH 227
NK+ V PL Y S L K L +P+ RP AELL H
Sbjct: 248 HQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307
Query: 228 PHLQ 231
Q
Sbjct: 308 DFFQ 311
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 15/224 (6%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSW-----VEKGCYVCIIIGYCEG 58
+KK+ Q + A++E+ L+ V + I+ + + +E+ V I++ +
Sbjct: 54 IKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
++++ I+ + E++ L Q+L+ + +LH+ I+HRD+K SNI + D +++
Sbjct: 114 -NLSQVIQ----MELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKIL 168
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFGLA+ + + + V T Y PE++ + Y DIWS+G + EM F
Sbjct: 169 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGT 228
Query: 179 DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAA 222
D NK+ + + P P F ++ +R E RP A
Sbjct: 229 DHIDQWNKVIEQLGTPSP-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
E++ L Q+L+ + +LH+ I+HRD+K SNI + D +++ DFGLA+ + + +
Sbjct: 126 ERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPY 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPL 195
V T Y PE++ + Y DIWS+G + EM F D NK+ + + P
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245
Query: 196 PTVYSGAFRGLVKSMLRKNPEFRPSAA 222
P F ++ +R E RP A
Sbjct: 246 P-----EFMKKLQPTVRTYVENRPKYA 267
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 20/239 (8%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + +ARR E+EL R P IV Y++ + + C + I++ +GG++
Sbjct: 46 LKMLQDCPKARR----EVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGEL 100
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLG 118
I+ F E + + + + A+ YLH+ +I HRDVK N+ T + ++L
Sbjct: 101 FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT 160
Query: 119 DFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF 178
DFG AK S + + TP Y+ PE+L Y D+WSLG +Y + F +
Sbjct: 161 DFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 220
Query: 179 -------DMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
M+ I P + S + L++++L+ P R + E + HP +
Sbjct: 221 HGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 13/171 (7%)
Query: 70 GVHFPEEKLCKWLVQLLMALNYLHAN-HILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS 128
G PE+ L K V ++ AL +LH+ ++HRDVK SN+ + ++ DFG++ L+
Sbjct: 130 GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLV- 188
Query: 129 DDLASSV-VGTPSYMCPEL----LADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL 183
DD+A + G Y PE L Y KSDIWSLG E++ + + ++
Sbjct: 189 DDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTP-- 246
Query: 184 INKINKSIVAPLPTV----YSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
++ + + P P + +S F L+KN + RP+ EL HP
Sbjct: 247 FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 16/219 (7%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH---FPEEKL 78
QE+E++ + +P I+ +++ E + +++ C GG++ E + VH F E
Sbjct: 72 QEIEIMKSLDHPNIIRLYETF-EDNTDIYLVMELCTGGELFERV-----VHKRVFRESDA 125
Query: 79 CKWLVQLLMALNYLHANHILHRDVKCSN-IFLTRDQD--IRLGDFGLAKMLISDDLASSV 135
+ + +L A+ Y H ++ HRD+K N +FLT D ++L DFGLA + +
Sbjct: 126 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK 185
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA-FDMQALINKINKSIVAP 194
VGTP Y+ P++L + YG + D WS G +Y + F A D + ++ + P
Sbjct: 186 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 195 LPTVY--SGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
S L++ +L K+P+ R ++ + L H +
Sbjct: 245 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFE 283
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 16/215 (7%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH---FPEEKL 78
QE+E++ + +P I+ +++ E + +++ C GG++ E + VH F E
Sbjct: 55 QEIEIMKSLDHPNIIRLYETF-EDNTDIYLVMELCTGGELFERV-----VHKRVFRESDA 108
Query: 79 CKWLVQLLMALNYLHANHILHRDVKCSN-IFLTRDQD--IRLGDFGLAKMLISDDLASSV 135
+ + +L A+ Y H ++ HRD+K N +FLT D ++L DFGLA + +
Sbjct: 109 ARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK 168
Query: 136 VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA-FDMQALINKINKSIVAP 194
VGTP Y+ P++L + YG + D WS G +Y + F A D + ++ + P
Sbjct: 169 VGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 195 LPTVY--SGAFRGLVKSMLRKNPEFRPSAAELLCH 227
S L++ +L K+P+ R ++ + L H
Sbjct: 228 EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II+ EGG++ I++ F E + + + + A+ +LH+++I HRDVK N+
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 109 LT---RDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCV 165
T +D ++L DFG AK + L + TP Y+ PE+L Y D+WSLG +
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
Query: 166 YEMSAQKAAFKAFDMQALINKINKSIVA-------PLPTVYSGAFRGLVKSMLRKNPEFR 218
Y + F + QA+ + + I P + S + L++ +L+ +P R
Sbjct: 201 YILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 260
Query: 219 PSAAELLCHP 228
+ + + HP
Sbjct: 261 LTITQFMNHP 270
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II+ EGG++ I++ F E + + + + A+ +LH+++I HRDVK N+
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 109 LT---RDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCV 165
T +D ++L DFG AK + L + TP Y+ PE+L Y D+WSLG +
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQNALQTPCY-TPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
Query: 166 YEMSAQKAAFKAFDMQALINKINKSIVA-------PLPTVYSGAFRGLVKSMLRKNPEFR 218
Y + F + QA+ + + I P + S + L++ +L+ +P R
Sbjct: 220 YILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTER 279
Query: 219 PSAAELLCHP 228
+ + + HP
Sbjct: 280 LTITQFMNHP 289
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 11/206 (5%)
Query: 30 VRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMAL 89
+R+P IV +K+ + ++ I++ Y GG++ E I N F E++ + QL+ +
Sbjct: 72 LRHPNIVRFKEV-ILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGV 128
Query: 90 NYLHANHILHRDVKCSNIFLTRDQDIRLG--DFGLAKMLISDDLASSVVGTPSYMCPELL 147
+Y HA + HRD+K N L RL FG +K + S VGTP+Y+ PE+L
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVL 188
Query: 148 ADIPY-GSKSDIWSLGCCVYEMSAQKAAFKA----FDMQALINKI-NKSIVAPLPTVYSG 201
Y G +D+WS G +Y M F+ + + I++I N P S
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCH 227
R L+ + +P R S E+ H
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 113/232 (48%), Gaps = 11/232 (4%)
Query: 2 YVLKKIRLARQTDRARRSAH----QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCE 57
Y L K ++A +T + + +E E++ ++ +P +V+ +E+ +C++ + E
Sbjct: 47 YWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAP-ICLVFEFME 105
Query: 58 GGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
G +++ ++ G+ F E L + + + YL ++HRD+ N + +Q I++
Sbjct: 106 HGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKV 164
Query: 118 GDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFG+ + ++ D SS GT + PE+ + Y SKSD+WS G ++E+ S K
Sbjct: 165 SDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 223
Query: 174 AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ ++ I+ P + S ++ ++ PE RP+ + LL
Sbjct: 224 PYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLL 275
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Query: 48 YVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNI 107
Y+ +++ Y GGD+ + K G P E +L +++MA++ +H +HRD+K NI
Sbjct: 135 YLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNI 193
Query: 108 FLTRDQDIRLGDFGLAKMLISDDLASSV--VGTPSYMCPELLADIPYGS-------KSDI 158
L R IRL DFG L +D S+ VGTP Y+ PE+L + G + D
Sbjct: 194 LLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDW 253
Query: 159 WSLGCCVYEMSAQKAAFKA 177
W+LG YEM + F A
Sbjct: 254 WALGVFAYEMFYGQTPFYA 272
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 105/220 (47%), Gaps = 7/220 (3%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEE 76
+ + E+ +++++ +P ++ D++ +K + +I+ + GG++ + I A E
Sbjct: 92 KYTVKNEISIMNQLHHPKLINLHDAFEDK-YEMVLILEFLSGGELFDRIA-AEDYKMSEA 149
Query: 77 KLCKWLVQLLMALNYLHANHILHRDVKCSNIF--LTRDQDIRLGDFGLAKMLISDDLASS 134
++ ++ Q L ++H + I+H D+K NI + +++ DFGLA L D++
Sbjct: 150 EVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV 209
Query: 135 VVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAP 194
T + PE++ P G +D+W++G Y + + + F D + + +
Sbjct: 210 TTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEF 269
Query: 195 LPTVYSGA---FRGLVKSMLRKNPEFRPSAAELLCHPHLQ 231
+S + +K++L+K P R + + L HP L+
Sbjct: 270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 29/215 (13%)
Query: 35 IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV--HFPEEKLCKWLVQLLMALNYL 92
+V Y +W E ++ I YC GG +A+AI + + +F E +L L+Q+ L Y+
Sbjct: 69 VVRYFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 127
Query: 93 HANHILHRDVKCSNIFLTR-----------DQD--------IRLGDFGLAKMLISDDLAS 133
H+ ++H D+K SNIF++R D+D ++GD G + S +
Sbjct: 128 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 187
Query: 134 SVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
G ++ E+L + + K+DI++L V + + + D ++I + +
Sbjct: 188 ---GDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQW---HEIRQGRL 241
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
+P V S F L+K M+ +PE RPSA L+ H
Sbjct: 242 PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 5/195 (2%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
LK+IRL + + +A +E+ L+ + +P IV D + C + ++ + E D+ +
Sbjct: 50 LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERC-LTLVFEFMEK-DLKK 107
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
+ + N + ++ +L QLL + + H + ILHRD+K N+ + D ++L DFGLA
Sbjct: 108 VLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Query: 124 KML-ISDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ 181
+ I + V T Y P+ L+ Y + DIWS+GC EM K F
Sbjct: 167 RAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD 226
Query: 182 ALINKINKSIVAPLP 196
+ KI + P P
Sbjct: 227 DQLPKIFSILGTPNP 241
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K A ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 100 LVTHLMGADLNNIVKCAK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 157 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 171 QKAAFKAFDM---------------QALINKINK-------SIVAPLPTV-YSGAFRG-- 205
+ F D L+ KI+ +A +P + ++ F G
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 274
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 15 RARRSAHQEMELISRVRNPFIVEYKDSW---VEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
R RR A L +P IV D+ G I++ Y +G + + I G
Sbjct: 58 RFRREAQNAAAL----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGP 112
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLI---- 127
P+ + + + ALN+ H N I+HRDVK +NI ++ +++ DFG+A+ +
Sbjct: 113 MTPKRAI-EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 128 SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKI 187
S ++V+GT Y+ PE ++SD++SLGC +YE+ + F ++ +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQH 231
Query: 188 NKSIVAPLPTVYSGA---FRGLVKSMLRKNPEFR-PSAAEL 224
+ P + G +V L KNPE R +AAE+
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 24 MELISRVRNPFIV--EYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+ L+S PFIV Y +K + I+ GGD+ + + +GV F E + +
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDK---LSFILDLMNGGDLHYHLSQ-HGV-FSEADMRFY 297
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
++++ L ++H +++RD+K +NI L +R+ D GLA S + VGT Y
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGY 356
Query: 142 MCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL--INKINKSIVAPLPTV 198
M PE+L + Y S +D +SLGC ++++ + F+ + I+++ ++ LP
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 416
Query: 199 YSGAFRGLVKSMLRKN 214
+S R L++ +L+++
Sbjct: 417 FSPELRSLLEGLLQRD 432
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 5/195 (2%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
LK+IRL + + +A +E+ L+ + +P IV D + C + ++ + E D+ +
Sbjct: 50 LKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERC-LTLVFEFMEK-DLKK 107
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
+ + N + ++ +L QLL + + H + ILHRD+K N+ + D ++L DFGLA
Sbjct: 108 VLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Query: 124 KML-ISDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQ 181
+ I + V T Y P+ L+ Y + DIWS+GC EM K F
Sbjct: 167 RAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD 226
Query: 182 ALINKINKSIVAPLP 196
+ KI + P P
Sbjct: 227 DQLPKIFSILGTPNP 241
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 22 QEMELISRVRNPFIVEYKDSWV---EKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKL 78
+E+ L++ +P I+ +D +V E + ++ D+A+ I V P+ +
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH-I 136
Query: 79 CKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT 138
++ +L+ L+ LH ++HRD+ NI L + DI + DF LA+ +D + V
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH 196
Query: 139 PSYMCPELLADIPYGSK-SDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAP--- 194
Y PEL+ +K D+WS GC + EM +KA F+ +NKI + + P
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 195 -----------------------------LPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+PT A L+ ML NP+ R S + L
Sbjct: 257 DVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL-DLIAKMLEFNPQRRISTEQAL 315
Query: 226 CHPHLQ 231
HP+ +
Sbjct: 316 RHPYFE 321
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 24 MELISRVRNPFIV--EYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+ L+S PFIV Y +K + I+ GGD+ + + +GV F E + +
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDK---LSFILDLMNGGDLHYHLSQ-HGV-FSEADMRFY 296
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
++++ L ++H +++RD+K +NI L +R+ D GLA S + VGT Y
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGY 355
Query: 142 MCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL--INKINKSIVAPLPTV 198
M PE+L + Y S +D +SLGC ++++ + F+ + I+++ ++ LP
Sbjct: 356 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 415
Query: 199 YSGAFRGLVKSMLRKN 214
+S R L++ +L+++
Sbjct: 416 FSPELRSLLEGLLQRD 431
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 22 QEMELISRVRNPFIVEYKDSWV---EKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKL 78
+E+ L++ +P I+ +D +V E + ++ D+A+ I V P+ +
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH-I 136
Query: 79 CKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT 138
++ +L+ L+ LH ++HRD+ NI L + DI + DF LA+ +D + V
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH 196
Query: 139 PSYMCPELLADIPYGSK-SDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAP--- 194
Y PEL+ +K D+WS GC + EM +KA F+ +NKI + + P
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 195 -----------------------------LPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+PT A L+ ML NP+ R S + L
Sbjct: 257 DVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL-DLIAKMLEFNPQRRISTEQAL 315
Query: 226 CHPHLQ 231
HP+ +
Sbjct: 316 RHPYFE 321
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + + F +L Q ++YLHA +I+HRD+K +NIF
Sbjct: 106 LAIVTQWCEGSSLYKHLH-VQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIF 164
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSV---VGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L +++GDFGLA + + V G+ +M PE++ + P+ +SD++S G
Sbjct: 165 LHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYG 224
Query: 163 CCVYEMSAQKAAFKAFDMQ-ALINKINKSIVAP-LPTVYSG---AFRGLVKSMLRKNPEF 217
+YE+ + + + + +I + + +P L +Y A + LV ++K E
Sbjct: 225 IVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEE 284
Query: 218 RP------SAAELLCH 227
RP S+ ELL H
Sbjct: 285 RPLFPQILSSIELLQH 300
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 24 MELISRVRNPFIV--EYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+ L+S PFIV Y +K + I+ GGD+ + + +GV F E + +
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDK---LSFILDLMNGGDLHYHLSQ-HGV-FSEADMRFY 297
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
++++ L ++H +++RD+K +NI L +R+ D GLA S + VGT Y
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGY 356
Query: 142 MCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL--INKINKSIVAPLPTV 198
M PE+L + Y S +D +SLGC ++++ + F+ + I+++ ++ LP
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 416
Query: 199 YSGAFRGLVKSMLRKN 214
+S R L++ +L+++
Sbjct: 417 FSPELRSLLEGLLQRD 432
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 24 MELISRVRNPFIV--EYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+ L+S PFIV Y +K + I+ GGD+ + + +GV F E + +
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDK---LSFILDLMNGGDLHYHLSQ-HGV-FSEADMRFY 297
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
++++ L ++H +++RD+K +NI L +R+ D GLA S + VGT Y
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGY 356
Query: 142 MCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL--INKINKSIVAPLPTV 198
M PE+L + Y S +D +SLGC ++++ + F+ + I+++ ++ LP
Sbjct: 357 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 416
Query: 199 YSGAFRGLVKSMLRKN 214
+S R L++ +L+++
Sbjct: 417 FSPELRSLLEGLLQRD 432
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 48/254 (18%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKG-----CYVCIIIGYCEGGDMAEAIKKANGV 71
+R ++E++++ V++P +V+ K + G ++ +++ Y + E + +A+
Sbjct: 76 KRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY-----VPETVYRASR- 129
Query: 72 HFPEEK------LCK-WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLA 123
H+ + K L K ++ QLL +L Y+H+ I HRD+K N+ L + +L DFG A
Sbjct: 130 HYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSA 189
Query: 124 KMLISDDLASSVVGTPSYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQA 182
K+LI+ + S + + Y PEL+ Y + DIWS GC + E+ + F
Sbjct: 190 KILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID 249
Query: 183 LINKINKSIVAP--------------------LPTVYSGAFR--------GLVKSMLRKN 214
+ +I K + P P +S FR L+ +L
Sbjct: 250 QLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYT 309
Query: 215 PEFRPSAAELLCHP 228
P R +A E LCHP
Sbjct: 310 PSARLTAIEALCHP 323
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 30 VRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMAL 89
+R+P IV +K+ + ++ I++ Y GG++ E I N F E++ + QL+ +
Sbjct: 72 LRHPNIVRFKEV-ILTPTHLAIVMEYASGGELFERI--CNAGRFSEDEARFFFQQLISGV 128
Query: 90 NYLHANHILHRDVKCSNIFLTRDQDIRLG--DFGLAKMLISDDLASSVVGTPSYMCPELL 147
+Y HA + HRD+K N L RL FG +K + VGTP+Y+ PE+L
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVL 188
Query: 148 ADIPY-GSKSDIWSLGCCVYEMSAQKAAFKA----FDMQALINKI-NKSIVAPLPTVYSG 201
Y G +D+WS G +Y M F+ + + I++I N P S
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISP 248
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCH 227
R L+ + +P R S E+ H
Sbjct: 249 ECRHLISRIFVADPAKRISIPEIRNH 274
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 15 RARRSAHQEMELISRVRNPFIVEYKDSW---VEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
R RR A L +P IV D+ G I++ Y +G + + I G
Sbjct: 58 RFRREAQNAAAL----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGP 112
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLI---- 127
P+ + + + ALN+ H N I+HRDVK +NI ++ +++ DFG+A+ +
Sbjct: 113 MTPKRAI-EVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGN 171
Query: 128 SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKI 187
S ++V+GT Y+ PE ++SD++SLGC +YE+ + F ++ +
Sbjct: 172 SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 188 NKSIVAPLPTVYSGA---FRGLVKSMLRKNPEFR-PSAAEL 224
+ P + G +V L KNPE R +AAE+
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + F KL Q ++YLHA I+HRD+K +NIF
Sbjct: 105 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 163
Query: 109 LTRDQDIRLGDFGLAKM---LISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 164 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 223
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSG---AFRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S A + L+ L+K +
Sbjct: 224 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 283
Query: 218 RPSAAELLCHPHL 230
RP ++L L
Sbjct: 284 RPLFPQILASIEL 296
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 106 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 163 DSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 280
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 15 RARRSAHQEMELISRVRNPFIVEYKDSW---VEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
R RR A L +P IV D+ G I++ Y +G + + I G
Sbjct: 58 RFRREAQNAAAL----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGP 112
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLI---- 127
P+ + + + ALN+ H N I+HRDVK +NI ++ +++ DFG+A+ +
Sbjct: 113 MTPKRAI-EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 128 SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKI 187
S ++V+GT Y+ PE ++SD++SLGC +YE+ + F ++ +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 188 NKSIVAPLPTVYSGA---FRGLVKSMLRKNPEFR-PSAAEL 224
+ P + G +V L KNPE R +AAE+
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 109 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 166 DXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 283
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 110 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 167 DSELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 284
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 109 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 166 DXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 283
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + F KL Q ++YLHA I+HRD+K +NIF
Sbjct: 106 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 164
Query: 109 LTRDQDIRLGDFGLAKM---LISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 165 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSG---AFRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S A + L+ L+K +
Sbjct: 225 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 284
Query: 218 RPSAAELLCHPHL 230
RP ++L L
Sbjct: 285 RPLFPQILASIEL 297
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 15 RARRSAHQEMELISRVRNPFIVEYKDSW---VEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
R RR A L +P IV D+ G I++ Y +G + + I G
Sbjct: 58 RFRREAQNAAAL----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGP 112
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLI---- 127
P+ + + + ALN+ H N I+HRDVK +NI ++ +++ DFG+A+ +
Sbjct: 113 MTPKRAI-EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 128 SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKI 187
S ++V+GT Y+ PE ++SD++SLGC +YE+ + F ++ +
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231
Query: 188 NKSIVAPLPTVYSGA---FRGLVKSMLRKNPEFR-PSAAEL 224
+ P + G +V L KNPE R +AAE+
Sbjct: 232 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 115 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 171
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 172 DXELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 230 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 289
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 290 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 115/270 (42%), Gaps = 53/270 (19%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCI---------- 51
+ LKKIRL ++ + + +E+ ++ +++ IV+ D K V +
Sbjct: 29 FALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKK 88
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ CEGG + K +L+QLL + Y H +LHRD+K N+ + R
Sbjct: 89 LLDVCEGGLESVTAKS-------------FLLQLLNGIAYCHDRRVLHRDLKPQNLLINR 135
Query: 112 DQDIRLGDFGLAKML-ISDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEM- 168
+ ++++ DFGLA+ I + V T Y P+ L+ Y + DIWS+GC EM
Sbjct: 136 EGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
Query: 169 ---------SAQKAAFKAFDMQALINKINKSIVAPLP------TVY-----SGAFRGLVK 208
S + F + N N V LP TVY +GL +
Sbjct: 196 NGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDE 255
Query: 209 S-------MLRKNPEFRPSAAELLCHPHLQ 231
S ML+ +P R +A + L H + +
Sbjct: 256 SGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 115/270 (42%), Gaps = 53/270 (19%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCI---------- 51
+ LKKIRL ++ + + +E+ ++ +++ IV+ D K V +
Sbjct: 29 FALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKK 88
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ CEGG + K +L+QLL + Y H +LHRD+K N+ + R
Sbjct: 89 LLDVCEGGLESVTAKS-------------FLLQLLNGIAYCHDRRVLHRDLKPQNLLINR 135
Query: 112 DQDIRLGDFGLAKML-ISDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEM- 168
+ ++++ DFGLA+ I + V T Y P+ L+ Y + DIWS+GC EM
Sbjct: 136 EGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
Query: 169 ---------SAQKAAFKAFDMQALINKINKSIVAPLP------TVY-----SGAFRGLVK 208
S + F + N N V LP TVY +GL +
Sbjct: 196 NGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDE 255
Query: 209 S-------MLRKNPEFRPSAAELLCHPHLQ 231
S ML+ +P R +A + L H + +
Sbjct: 256 SGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 110 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 167 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 171 QKAAFKAFDM---------------QALINKINK-------SIVAPLPTV-YSGAFRG-- 205
+ F D L+ KI+ +A +P + ++ F G
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 284
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 115/270 (42%), Gaps = 53/270 (19%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCI---------- 51
+ LKKIRL ++ + + +E+ ++ +++ IV+ D K V +
Sbjct: 29 FALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKK 88
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ CEGG + K +L+QLL + Y H +LHRD+K N+ + R
Sbjct: 89 LLDVCEGGLESVTAKS-------------FLLQLLNGIAYCHDRRVLHRDLKPQNLLINR 135
Query: 112 DQDIRLGDFGLAKML-ISDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEM- 168
+ ++++ DFGLA+ I + + T Y P+ L+ Y + DIWS+GC EM
Sbjct: 136 EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195
Query: 169 ---------SAQKAAFKAFDMQALINKINKSIVAPLP------TVY-----SGAFRGLVK 208
S + F + N N V LP TVY +GL +
Sbjct: 196 NGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDE 255
Query: 209 S-------MLRKNPEFRPSAAELLCHPHLQ 231
S ML+ +P R +A + L H + +
Sbjct: 256 SGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + F KL Q ++YLHA I+HRD+K +NIF
Sbjct: 80 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 138
Query: 109 LTRDQDIRLGDFGLAKM---LISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 139 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 198
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSG---AFRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S A + L+ L+K +
Sbjct: 199 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 258
Query: 218 RPSAAELLC 226
RP ++L
Sbjct: 259 RPLFPQILA 267
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 123 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 179
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 180 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
Query: 171 QKAAFKAFDM---------------QALINKINK-------SIVAPLPTV-YSGAFRG-- 205
+ F D L+ KI+ +A +P + ++ F G
Sbjct: 238 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 297
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 298 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKSQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGL + +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DSELKILDFGLCRH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDM---------------QALINKINK-------SIVAPLPTV-YSGAFRG-- 205
+ F D L+ KI+ +A +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + F KL Q ++YLHA I+HRD+K +NIF
Sbjct: 83 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 141
Query: 109 LTRDQDIRLGDFGLAKM---LISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSG---AFRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S A + L+ L+K +
Sbjct: 202 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 261
Query: 218 RPSAAELLC 226
RP ++L
Sbjct: 262 RPLFPQILA 270
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDM---------------QALINKINK-------SIVAPLPTV-YSGAFRG-- 205
+ F D L+ KI+ +A +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 124 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 181 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 171 QKAAFKAFDM---------------QALINKINK-------SIVAPLPTV-YSGAFRG-- 205
+ F D L+ KI+ +A +P + ++ F G
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 298
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 114 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 170
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 171 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
Query: 171 QKAAFKAFDM---------------QALINKINK-------SIVAPLPTV-YSGAFRG-- 205
+ F D L+ KI+ +A +P + ++ F G
Sbjct: 229 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 288
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 289 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 321
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 91/193 (47%), Gaps = 12/193 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + F KL Q ++YLHA I+HRD+K +NIF
Sbjct: 83 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 141
Query: 109 LTRDQDIRLGDFGLAKM---LISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSG---AFRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S A + L+ L+K +
Sbjct: 202 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 261
Query: 218 RPSAAELLCHPHL 230
RP ++L L
Sbjct: 262 RPLFPQILASIEL 274
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + F KL Q ++YLHA I+HRD+K +NIF
Sbjct: 106 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 164
Query: 109 LTRDQDIRLGDFGLA---KMLISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + G+ +M PE++ PY +SD+++ G
Sbjct: 165 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSG---AFRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S A + L+ L+K +
Sbjct: 225 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 284
Query: 218 RPSAAELLC 226
RP ++L
Sbjct: 285 RPLFPQILA 293
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 18/227 (7%)
Query: 20 AHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYC-EGGDMAEAIKKANGVHF 73
A +E+EL R P IV Y++ + + C +I+ C +GG++ I+ F
Sbjct: 101 ARREVELHWRASQCPHIVRIVDVYENLYAGRKC--LLIVXECLDGGELFSRIQDRGDQAF 158
Query: 74 PEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRLGDFGLAKMLISDD 130
E + + + A+ YLH+ +I HRDVK N+ T + ++L DFG AK S +
Sbjct: 159 TEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218
Query: 131 LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQAL------- 183
++ TP Y+ PE+L Y D WSLG Y + F + A+
Sbjct: 219 SLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTR 278
Query: 184 INKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
I P + S + L++++L+ P R + E HP +
Sbjct: 279 IRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 29/215 (13%)
Query: 35 IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV--HFPEEKLCKWLVQLLMALNYL 92
+V Y +W E ++ I YC GG +A+AI + + +F E +L L+Q+ L Y+
Sbjct: 71 VVRYFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 93 HANHILHRDVKCSNIFLTR-----------DQD--------IRLGDFGLAKMLISDDLAS 133
H+ ++H D+K SNIF++R D+D ++GD G + S +
Sbjct: 130 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 189
Query: 134 SVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
G ++ E+L + + K+DI++L V + + + D ++I + +
Sbjct: 190 ---GDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW---HEIRQGRL 243
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
+P V S F L+K M+ +PE RPSA L+ H
Sbjct: 244 PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + F KL Q ++YLHA I+HRD+K +NIF
Sbjct: 98 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 156
Query: 109 LTRDQDIRLGDFGLA---KMLISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + G+ +M PE++ PY +SD+++ G
Sbjct: 157 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 216
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSG---AFRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S A + L+ L+K +
Sbjct: 217 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 276
Query: 218 RPSAAELLC 226
RP ++L
Sbjct: 277 RPLFPQILA 285
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 100 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 157 DCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 171 QKAAFKAFDM---------------QALINKINK-------SIVAPLPTV-YSGAFRG-- 205
+ F D L+ KI+ +A +P + ++ F G
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 274
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 29/215 (13%)
Query: 35 IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV--HFPEEKLCKWLVQLLMALNYL 92
+V Y +W E ++ I YC GG +A+AI + + +F E +L L+Q+ L Y+
Sbjct: 71 VVRYFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 129
Query: 93 HANHILHRDVKCSNIFLTR-----------DQD--------IRLGDFGLAKMLISDDLAS 133
H+ ++H D+K SNIF++R D+D ++GD G + S +
Sbjct: 130 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 189
Query: 134 SVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
G ++ E+L + + K+DI++L V + + + D ++I + +
Sbjct: 190 ---GDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW---HEIRQGRL 243
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
+P V S F L+K M+ +PE RPSA L+ H
Sbjct: 244 PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 100 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 157 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 171 QKAAFKAFDM---------------QALINKINK-------SIVAPLPTV-YSGAFRG-- 205
+ F D L+ KI+ +A +P + ++ F G
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 274
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + F KL Q ++YLHA I+HRD+K +NIF
Sbjct: 78 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 136
Query: 109 LTRDQDIRLGDFGLAKM---LISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSG---AFRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S A + L+ L+K +
Sbjct: 197 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 256
Query: 218 RPSAAELLC 226
RP ++L
Sbjct: 257 RPLFPQILA 265
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + F KL Q ++YLHA I+HRD+K +NIF
Sbjct: 78 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 136
Query: 109 LTRDQDIRLGDFGLAKM---LISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + + G+ +M PE++ PY +SD+++ G
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSG---AFRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S A + L+ L+K +
Sbjct: 197 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 256
Query: 218 RPSAAELLC 226
RP ++L
Sbjct: 257 RPLFPQILA 265
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 29/215 (13%)
Query: 35 IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV--HFPEEKLCKWLVQLLMALNYL 92
+V Y +W E ++ I YC GG +A+AI + + +F E +L L+Q+ L Y+
Sbjct: 73 VVRYFSAWAEDD-HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131
Query: 93 HANHILHRDVKCSNIFLTR-----------DQD--------IRLGDFGLAKMLISDDLAS 133
H+ ++H D+K SNIF++R D+D ++GD G + S +
Sbjct: 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEE 191
Query: 134 SVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
G ++ E+L + + K+DI++L V + + + D ++I + +
Sbjct: 192 ---GDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW---HEIRQGRL 245
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
+P V S F L+K M+ +PE RPSA L+ H
Sbjct: 246 PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 55 YCEGGDMAEAIKK-ANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT--- 110
YCEGGD+ + + + N E + L + AL YLH N I+HRD+K NI L
Sbjct: 100 YCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP 159
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYE 167
+ ++ D G AK L +L + VGT Y+ PELL Y D WS G +E
Sbjct: 160 QRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 55 YCEGGDMAEAIKK-ANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT--- 110
YCEGGD+ + + + N E + L + AL YLH N I+HRD+K NI L
Sbjct: 99 YCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP 158
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYE 167
+ ++ D G AK L +L + VGT Y+ PELL Y D WS G +E
Sbjct: 159 QRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 215
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 10/164 (6%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 110 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 167 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 171 QKAAFKAFDMQALINKINKSIVAP----LPTVYSGAFRGLVKSM 210
+ F D + I + + P L + S + R ++S+
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSL 268
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 116 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 173 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 290
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 116 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 173 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 290
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 106 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 163 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 280
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 127 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 183
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 184 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 242 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 301
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 302 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 124 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 181 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 298
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 106 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 163 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 280
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 116 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 172
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 173 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 231 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 290
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 291 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 123 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 179
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 180 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 238 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 297
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 298 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 330
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 110 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 166
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 167 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 225 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 284
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 285 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 111 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 168 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 285
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 109 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 166 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 283
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 103 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 159
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 160 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 218 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 277
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 278 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 310
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 115 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 171
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 172 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 230 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 289
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 290 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 106 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 162
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 163 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 221 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 280
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 281 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 17/221 (7%)
Query: 15 RARRSAHQEMELISRVRNPFIVEYKDSW---VEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
R RR A L +P IV D+ G I++ Y +G + + I G
Sbjct: 75 RFRREAQNAAAL----NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGP 129
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLI---- 127
P+ + + + ALN+ H N I+HRDVK +NI ++ +++ DFG+A+ +
Sbjct: 130 MTPKRAI-EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 188
Query: 128 SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKI 187
S ++V+GT Y+ PE ++SD++SLGC +YE+ + F ++ +
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 248
Query: 188 NKSIVAPLPTVYSGA---FRGLVKSMLRKNPEFR-PSAAEL 224
+ P + G +V L KNPE R +AAE+
Sbjct: 249 VREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 289
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 109 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 165
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 166 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 224 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 283
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 284 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 27/254 (10%)
Query: 12 QTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
+++ R++ E+ +SRV +P IV+ + + VC+++ Y EGG + + A +
Sbjct: 41 ESESERKAFIVELRQLSRVNHPNIVKLYGACLNP---VCLVMEYAEGGSLYNVLHGAEPL 97
Query: 72 -HFPEEKLCKWLVQLLMALNYLHANH---ILHRDVKCSNIFLTRDQDI-RLGDFGLAKML 126
++ W +Q + YLH+ ++HRD+K N+ L + ++ DFG A
Sbjct: 98 PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-- 155
Query: 127 ISDDLASSVV---GTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD---- 179
D+ + + G+ ++M PE+ Y K D++S G ++E+ ++ F
Sbjct: 156 ---DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 212
Query: 180 --MQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL-CHPHLQPYVLG 236
M A+ N ++ LP L+ K+P RPS E++ HL Y G
Sbjct: 213 RIMWAVHNGTRPPLIKNLPK----PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 268
Query: 237 IHLKLNGPRRNTFP 250
L P +++ P
Sbjct: 269 ADEPLQYPCQHSLP 282
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 101 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 157
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 158 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 216 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 275
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 276 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 102 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 158
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 159 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 217 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 276
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 277 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 309
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 124 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 180
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 181 DCELKILDFGLARH--TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
Query: 171 QKAAFKAFDM---------------QALINKINK-------SIVAPLPTV-YSGAFRG-- 205
+ F D L+ KI+ +A +P + ++ F G
Sbjct: 239 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGAN 298
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 299 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 331
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 100 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 156
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 157 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 215 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 274
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 275 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 101 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 157
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 158 DCELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 216 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 275
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 276 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 10/182 (5%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
I++ Y +G + + I G P+ + + + ALN+ H N I+HRDVK +NI ++
Sbjct: 93 IVMEYVDGVTLRD-IVHTEGPMTPKRAI-EVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 111 RDQDIRLGDFGLAKMLI----SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVY 166
+++ DFG+A+ + S ++V+GT Y+ PE ++SD++SLGC +Y
Sbjct: 151 ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLY 210
Query: 167 EMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGA---FRGLVKSMLRKNPEFR-PSAA 222
E+ + F ++ + + P + G +V L KNPE R +AA
Sbjct: 211 EVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270
Query: 223 EL 224
E+
Sbjct: 271 EM 272
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ I+ +CEG + + F KL Q ++YLHA I+HRD+K +NIF
Sbjct: 78 LAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIF 136
Query: 109 LTRDQDIRLGDFGLA---KMLISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSLG 162
L D +++GDFGLA + G+ +M PE++ PY +SD+++ G
Sbjct: 137 LHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 163 CCVYE-MSAQKAAFKAFDMQALINKINKSIVAP-LPTVYSG---AFRGLVKSMLRKNPEF 217
+YE M+ Q + +I + + ++P L V S A + L+ L+K +
Sbjct: 197 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDE 256
Query: 218 RPSAAELLC 226
RP ++L
Sbjct: 257 RPLFPQILA 265
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 27/254 (10%)
Query: 12 QTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
+++ R++ E+ +SRV +P IV+ + + VC+++ Y EGG + + A +
Sbjct: 40 ESESERKAFIVELRQLSRVNHPNIVKLYGACLNP---VCLVMEYAEGGSLYNVLHGAEPL 96
Query: 72 -HFPEEKLCKWLVQLLMALNYLHANH---ILHRDVKCSNIFLTRDQDI-RLGDFGLAKML 126
++ W +Q + YLH+ ++HRD+K N+ L + ++ DFG A
Sbjct: 97 PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC-- 154
Query: 127 ISDDLASSVV---GTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFD---- 179
D+ + + G+ ++M PE+ Y K D++S G ++E+ ++ F
Sbjct: 155 ---DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 211
Query: 180 --MQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL-CHPHLQPYVLG 236
M A+ N ++ LP L+ K+P RPS E++ HL Y G
Sbjct: 212 RIMWAVHNGTRPPLIKNLPK----PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267
Query: 237 IHLKLNGPRRNTFP 250
L P +++ P
Sbjct: 268 ADEPLQYPCQHSLP 281
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 127 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 183
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ +DD V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 184 DCELKILDFGLARH--TDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 242 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 301
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 302 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ + + +P I+ + + ++ + +I+ Y G++ + ++K+ F E++
Sbjct: 72 REIEIQAHLHHPNILRLYNYFYDRR-RIYLILEYAPRGELYKELQKS--CTFDEQRTATI 128
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL Y H ++HRD+K N+ L ++++ DFG + S ++ GT Y
Sbjct: 129 MEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR-RKTMCGTLDY 187
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+W +G YE+ F++ +I K + +V +G
Sbjct: 188 LPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTG 247
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
A + L+ +LR NP R A++ HP
Sbjct: 248 A-QDLISKLLRHNPSERLPLAQVSAHP 273
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 28/215 (13%)
Query: 7 IRLARQTDRARRSAHQEMELISRVR-----NPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
+++ R + R +A E+ ++ +++ N F+ W ++CI G +
Sbjct: 50 LKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNT 108
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT----------- 110
E +K+ N +P + QL AL +LH N + H D+K NI
Sbjct: 109 FEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH 168
Query: 111 --------RDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLG 162
++ IR+ DFG A + +++V T Y PE++ ++ + D+WS+G
Sbjct: 169 KSCEEKSVKNTSIRVADFGSAT--FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIG 226
Query: 163 CCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
C ++E F+ + + + + K I+ P+P+
Sbjct: 227 CILFEYYRGFTLFQTHENREHLVMMEK-ILGPIPS 260
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 28/215 (13%)
Query: 7 IRLARQTDRARRSAHQEMELISRVR-----NPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
+++ R + R +A E+ ++ +++ N F+ W ++CI G +
Sbjct: 59 LKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNT 117
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT----------- 110
E +K+ N +P + QL AL +LH N + H D+K NI
Sbjct: 118 FEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH 177
Query: 111 --------RDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLG 162
++ IR+ DFG A + +++V T Y PE++ ++ + D+WS+G
Sbjct: 178 KSCEEKSVKNTSIRVADFGSAT--FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIG 235
Query: 163 CCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
C ++E F+ + + + + K I+ P+P+
Sbjct: 236 CILFEYYRGFTLFQTHENREHLVMMEK-ILGPIPS 269
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 28/215 (13%)
Query: 7 IRLARQTDRARRSAHQEMELISRVR-----NPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
+++ R + R +A E+ ++ +++ N F+ W ++CI G +
Sbjct: 82 LKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNT 140
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT----------- 110
E +K+ N +P + QL AL +LH N + H D+K NI
Sbjct: 141 FEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEH 200
Query: 111 --------RDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLG 162
++ IR+ DFG A + +++V T Y PE++ ++ + D+WS+G
Sbjct: 201 KSCEEKSVKNTSIRVADFGSAT--FDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIG 258
Query: 163 CCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
C ++E F+ + + + + K I+ P+P+
Sbjct: 259 CILFEYYRGFTLFQTHENREHLVMMEK-ILGPIPS 292
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 97/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ D+GLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDYGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 9/232 (3%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
++V K + T++ RR E ++ + +P ++ + + V K V II + E G
Sbjct: 62 IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI-HLEGVVTKSTPVMIITEFMENGS 120
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ +++ +G F +L L + + YL + +HRD+ NI + + ++ DF
Sbjct: 121 LDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDF 179
Query: 121 GLAKML---ISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKA 173
GL++ L SD +S +G + PE + + S SD+WS G ++E MS +
Sbjct: 180 GLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 239
Query: 174 AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ Q +IN I + P P A L+ +K+ RP +++
Sbjct: 240 PYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV 291
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 77/152 (50%), Gaps = 11/152 (7%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ ++ +CE D+A + V F ++ + + LL L Y+H N ILHRD+K +N+
Sbjct: 100 IYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 109 LTRDQDIRLGDFGLAKML-----ISDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLG 162
+TRD ++L DFGLA+ + + V T Y PE LL + YG D+W G
Sbjct: 158 ITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAG 217
Query: 163 CCVYEMSAQKAAFKAFDMQ---ALINKINKSI 191
C + EM + + Q ALI+++ SI
Sbjct: 218 CIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 249
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 106/223 (47%), Gaps = 7/223 (3%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK 66
+++ ++ + QE + + ++ +P +V++ K + I+ Y G + ++
Sbjct: 37 VKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGV-CSKEYPIYIVTEYISNGCLLNYLR 95
Query: 67 KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML 126
++G +L + + + +L ++ +HRD+ N + RD +++ DFG+ + +
Sbjct: 96 -SHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV 154
Query: 127 ISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQA 182
+ D SS VGT + PE+ Y SKSD+W+ G ++E+ S K + +
Sbjct: 155 LDDQYVSS-VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213
Query: 183 LINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ K+++ P + S ++ S + PE RP+ +LL
Sbjct: 214 VVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLL 256
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 8/204 (3%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+ LK+IRL + + A +A +E+ L+ +++ IV D + + ++ Y + D
Sbjct: 29 LVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDI-IHTEKSLTLVFEYLDK-D 85
Query: 61 MAEAIKK-ANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGD 119
+ + + N ++ KL +L QLL L Y H +LHRD+K N+ + +++L D
Sbjct: 86 LKQYLDDCGNIINMHNVKL--FLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLAD 143
Query: 120 FGLAKML-ISDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEMSAQKAAFKA 177
FGLA+ I + V T Y P+ LL Y ++ D+W +GC YEM+ + F
Sbjct: 144 FGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPG 203
Query: 178 FDMQALINKINKSIVAPLPTVYSG 201
++ ++ I + + P + G
Sbjct: 204 STVEEQLHFIFRILGTPTEETWPG 227
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 6/160 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T+ ++ QE++++++ ++ +VE + G +C++ Y G + + + +G
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELL-GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 73 -FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKM---LIS 128
CK +N+LH NH +HRD+K +NI L ++ DFGLA+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 129 DDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ S +VGT +YM PE L KSDI+S G + E+
Sbjct: 189 TVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEI 227
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ FGLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILGFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+++ GG++ E IKK HF E + + +L+ A++++H ++HRD+K N+ T
Sbjct: 83 LVMELLNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFT 140
Query: 111 RDQD---IRLGDFGLAKMLISDDL-ASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVY 166
+ D I++ DFG A++ D+ + T Y PELL Y D+WSLG +Y
Sbjct: 141 DENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILY 200
Query: 167 EMSAQKAAFKAFD 179
M + + F++ D
Sbjct: 201 TMLSGQVPFQSHD 213
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 111 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ + D + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 168 DCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 285
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 28/214 (13%)
Query: 7 IRLARQTDRARRSAHQEMELISRVR-----NPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + DR +A E++++ + + F W E ++CI+ G
Sbjct: 45 VKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLST 103
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT----------- 110
+ IK+ + F + + K Q+ ++N+LH+N + H D+K NI
Sbjct: 104 YDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPK 163
Query: 111 --RDQ------DIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLG 162
RD+ DI++ DFG A D+ S++V T Y PE++ + + D+WS+G
Sbjct: 164 IKRDERTLINPDIKVVDFGSATY--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIG 221
Query: 163 CCVYEMSAQKAAFKAFDMQALINKINKSIVAPLP 196
C + E F D + + + + I+ PLP
Sbjct: 222 CILIEYYLGFTVFPTHDSKEHLAMMER-ILGPLP 254
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 111 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ + D + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 168 DCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 285
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DF LA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDFYLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 111 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ DFGLA+ + D + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 168 DCELKILDFGLARH--TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 226 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 285
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 286 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 318
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ ++ +CE D+A + V F ++ + + LL L Y+H N ILHRD+K +N+
Sbjct: 99 IYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 156
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSV--------VGTPSYMCPE-LLADIPYGSKSDIW 159
+TRD ++L DFGLA+ LA + V T Y PE LL + YG D+W
Sbjct: 157 ITRDGVLKLADFGLARAF---SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLW 213
Query: 160 SLGCCVYEMSAQKAAFKAFDMQ---ALINKINKSI 191
GC + EM + + Q ALI+++ SI
Sbjct: 214 GAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 248
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 49 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 103
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++ A+ KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 104 RDYLQ-AHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 163 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 311 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 368
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 369 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 427
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 428 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 487
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK PE RP+
Sbjct: 488 ECPESLHDLMCQCWRKEPEERPT 510
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ D GLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDAGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T+ ++ QE++++++ ++ +VE + G +C++ Y G + + + +G
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELL-GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 73 -FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL 131
CK +N+LH NH +HRD+K +NI L ++ DFGLA+ S+
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA--SEKF 186
Query: 132 ASSV-----VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
A +V VGT +YM PE L KSDI+S G + E+
Sbjct: 187 AQTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEI 227
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 50 CIIIGYCEGGDMAEAIKK-ANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+I+ +C G + +++ +N PE + L ++ +N+L N I+HR++K NI
Sbjct: 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
Query: 109 LTRDQD----IRLGDFGLAKMLISDDLASSVVGTPSYMCPELLA--------DIPYGSKS 156
+D +L DFG A+ L D+ S+ GT Y+ P++ YG+
Sbjct: 145 RVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATV 204
Query: 157 DIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKS 209
D+WS+G Y + F+ F+ ++ I+ P SGA G+ K+
Sbjct: 205 DLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP---SGAISGVQKA 254
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 77 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 131
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 132 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 190
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 191 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+I Y G + + +K G + +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEXTARQGAKFP 178
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK+PE RP+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPT 261
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 167 EMSA 170
M A
Sbjct: 200 AMLA 203
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ ++ +CE D+A + V F ++ + + LL L Y+H N ILHRD+K +N+
Sbjct: 100 IYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSV--------VGTPSYMCPE-LLADIPYGSKSDIW 159
+TRD ++L DFGLA+ LA + V T Y PE LL + YG D+W
Sbjct: 158 ITRDGVLKLADFGLARAF---SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLW 214
Query: 160 SLGCCVYEMSAQKAAFKAFDMQ---ALINKINKSI 191
GC + EM + + Q ALI+++ SI
Sbjct: 215 GAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 249
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ ++ +CE D+A + V F ++ + + LL L Y+H N ILHRD+K +N+
Sbjct: 100 IYLVFDFCEH-DLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 157
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSV--------VGTPSYMCPE-LLADIPYGSKSDIW 159
+TRD ++L DFGLA+ LA + V T Y PE LL + YG D+W
Sbjct: 158 ITRDGVLKLADFGLARAF---SLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLW 214
Query: 160 SLGCCVYEMSAQKAAFKAFDMQ---ALINKINKSI 191
GC + EM + + Q ALI+++ SI
Sbjct: 215 GAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSI 249
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ D GLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDGGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 52 IIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR 111
++ + G D+ +K ++ + + Q+L L Y+H+ I+HRD+K SN+ +
Sbjct: 104 LVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 160
Query: 112 DQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLAD-IPYGSKSDIWSLGCCVYEMSA 170
D ++++ D GLA+ +DD + V T Y PE++ + + Y DIWS+GC + E+
Sbjct: 161 DCELKILDRGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
Query: 171 QKAAFKAFDMQALINKINKSIVAP----------------------LPTV-YSGAFRG-- 205
+ F D + I + + P +P + ++ F G
Sbjct: 219 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 278
Query: 206 -----LVKSMLRKNPEFRPSAAELLCHPHLQPY 233
L++ ML + + R +AA+ L H + Y
Sbjct: 279 PLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 167 EMSA 170
M A
Sbjct: 200 AMLA 203
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 51 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 105
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 106 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 164
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 165 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 53 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 107
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 108 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 166
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 167 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 50 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 104
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 105 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 163
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 164 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 11 RQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANG 70
R+ + + +E+ S++ + IV D E CY +++ Y EG ++E I+
Sbjct: 49 REKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCY-YLVMEYIEGPTLSEYIES--- 104
Query: 71 VHFP--EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS 128
H P + + Q+L + + H I+HRD+K NI + ++ +++ DFG+AK L
Sbjct: 105 -HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163
Query: 129 DDLASS--VVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
L + V+GT Y PE +DI+S+G +YEM
Sbjct: 164 TSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEM 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 45 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 99
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 100 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 158
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 159 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ + G +
Sbjct: 49 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEFLPYGSL 103
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
E ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 104 REYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 163 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 49 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 103
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 104 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 162
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 163 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 44 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 98
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 99 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 157
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 158 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 46 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 100
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 101 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 160 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCY-VCIIIGYCEGGDMAEAIKKANGVHFPE 75
R QE++++ + + I++YK + G + +++ Y G + + + + +
Sbjct: 77 RSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGL 133
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML--------I 127
+L + Q+ + YLHA H +HRD+ N+ L D+ +++GDFGLAK + +
Sbjct: 134 AQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRV 193
Query: 128 SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+D S V + PE L + + SD+WS G +YE+
Sbjct: 194 REDGDSPVF----WYAPECLKEYKFYYASDVWSFGVTLYEL 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 64 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 118
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 119 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 177
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 178 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 46 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 100
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 101 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 160 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 52 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 106
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 107 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 165
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 166 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+I Y G + + +K G + +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 178
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK+PE RP+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPT 261
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 64 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 118
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 119 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 177
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 178 LTKVLPQDK-EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + + ++ + +++ + G++ + ++K F E++ +
Sbjct: 64 REIEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHG--RFDEQRSATF 120
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H ++HRD+K N+ + ++++ DFG + S + GT Y
Sbjct: 121 MEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-RRXMCGTLDY 179
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+W G YE F + +I ++ P S
Sbjct: 180 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI-VNVDLKFPPFLSD 238
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
+ L+ +LR +P R ++ HP
Sbjct: 239 GSKDLISKLLRYHPPQRLPLKGVMEHP 265
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 80 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 137
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 138 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 197
Query: 167 EMSA 170
M A
Sbjct: 198 AMLA 201
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + + ++ + +++ + G++ + ++K F E++ +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHG--RFDEQRSATF 119
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H ++HRD+K N+ + ++++ DFG + S + GT Y
Sbjct: 120 MEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-RRXMCGTLDY 178
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+W G YE F + +I ++ P S
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-NVDLKFPPFLSD 237
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
+ L+ +LR +P R ++ HP
Sbjct: 238 GSKDLISKLLRYHPPQRLPLKGVMEHP 264
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 52/248 (20%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVC--IIIGYCEGGDMAEAIKKANGVHFPEE--- 76
E+++I+ ++N + C C II Y E + E ++ + + F E
Sbjct: 92 NELQIITDIKNEY------------CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFV 139
Query: 77 -----------KLCKWLVQ-LLMALNYLH-ANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
++ K +++ +L + +Y+H +I HRDVK SNI + ++ ++L DFG +
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 124 KMLISDDLASSVVGTPSYMCPELLADIP--YGSKSDIWSLGCCVYEMSAQKAAFK-AFDM 180
+ ++ + S GT +M PE ++ G+K DIWSLG C+Y M F +
Sbjct: 200 EYMVDKKIKGS-RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL 258
Query: 181 QALINKI-NKSIVAPLP-----------------TVYSGAFRGLVKSMLRKNPEFRPSAA 222
L N I K+I PL S +K LRKNP R ++
Sbjct: 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318
Query: 223 ELLCHPHL 230
+ L H L
Sbjct: 319 DALKHEWL 326
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 6/215 (2%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
+D R QE + + +P IV+ E V II+ C G++ + +
Sbjct: 431 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGEL-RSFLQVRKFS 487
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
L + QL AL YL + +HRD+ N+ ++ + ++LGDFGL++ +
Sbjct: 488 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 547
Query: 133 SSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA-FKAFDMQALINKINK 189
+ G +M PE + + S SD+W G C++E+ F+ +I +I
Sbjct: 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 607
Query: 190 SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P+P L+ +P RP EL
Sbjct: 608 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 167 EMSA 170
M A
Sbjct: 200 AMLA 203
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 167 EMSA 170
M A
Sbjct: 200 AMLA 203
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 167 EMSA 170
M A
Sbjct: 200 AMLA 203
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+E+ S +R+P I+ + + ++ + +++ + G++ + ++K F E++ +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRK-RIYLMLEFAPRGELYKELQKHG--RFDEQRSATF 119
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSY 141
+ +L AL+Y H ++HRD+K N+ + ++++ DFG + S + GT Y
Sbjct: 120 MEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-RRXMCGTLDY 178
Query: 142 MCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
+ PE++ + K D+W G YE F + +I ++ P S
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV-NVDLKFPPFLSD 237
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHP 228
+ L+ +LR +P R ++ HP
Sbjct: 238 GSKDLISKLLRYHPPQRLPLKGVMEHP 264
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 10/162 (6%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T+ ++ QE++++++ ++ +VE + G +C++ Y G + + + +G
Sbjct: 64 TEELKQQFDQEIKVMAKCQHENLVELL-GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 73 -FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL 131
CK +N+LH NH +HRD+K +NI L ++ DFGLA+ S+
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA--SEKF 180
Query: 132 ASSV-----VGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
A V VGT +YM PE L KSDI+S G + E+
Sbjct: 181 AQXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEI 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 6/215 (2%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
+D R QE + + +P IV+ E V II+ C G++ + +
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGEL-RSFLQVRKFS 107
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
L + QL AL YL + +HRD+ N+ ++ + ++LGDFGL++ +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXX 167
Query: 133 SSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA-FKAFDMQALINKINK 189
+ G +M PE + + S SD+W G C++E+ F+ +I +I
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 190 SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P+P L+ +P RP EL
Sbjct: 228 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 167 EMSA 170
M A
Sbjct: 200 AMLA 203
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 118/278 (42%), Gaps = 53/278 (19%)
Query: 6 KIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAI 65
KIR D R E+ L+ ++ +P I + + E Y+C+++ C GG + + +
Sbjct: 63 KIRQINPKDVERIKT--EVRLMKKLHHPNIARLYEVY-EDEQYICLVMELCHGGHLLDKL 119
Query: 66 ----------------------------KKANG-VH-FPE-------EKLCKWLV-QLLM 87
+ NG +H F E EKL ++ Q+
Sbjct: 120 NVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQ--DIRLGDFGLAKMLISDDLA-----SSVVGTPS 140
AL+YLH I HRD+K N + ++ +I+L DFGL+K + ++ GTP
Sbjct: 180 ALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY 239
Query: 141 YMCPELL--ADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF-DMQALINKINKSIVAPLP- 196
++ PE+L + YG K D WS G ++ + F D + +NK + P
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPN 299
Query: 197 -TVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
V S R L+ ++L +N + R A L HP + +
Sbjct: 300 YNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQF 337
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 6/215 (2%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
+D R QE + + +P IV+ E V II+ C G++ + +
Sbjct: 79 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGEL-RSFLQVRKYS 135
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
L + QL AL YL + +HRD+ N+ ++ + ++LGDFGL++ +
Sbjct: 136 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 195
Query: 133 SSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA-FKAFDMQALINKINK 189
+ G +M PE + + S SD+W G C++E+ F+ +I +I
Sbjct: 196 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 255
Query: 190 SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P+P L+ +P RP EL
Sbjct: 256 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 290
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 6/215 (2%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
+D R QE + + +P IV+ E V II+ C G++ + +
Sbjct: 53 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGEL-RSFLQVRKYS 109
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
L + QL AL YL + +HRD+ N+ ++ + ++LGDFGL++ +
Sbjct: 110 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 169
Query: 133 SSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA-FKAFDMQALINKINK 189
+ G +M PE + + S SD+W G C++E+ F+ +I +I
Sbjct: 170 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 229
Query: 190 SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P+P L+ +P RP EL
Sbjct: 230 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 264
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 6/215 (2%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
+D R QE + + +P IV+ E V II+ C G++ + +
Sbjct: 54 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGEL-RSFLQVRKYS 110
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
L + QL AL YL + +HRD+ N+ ++ + ++LGDFGL++ +
Sbjct: 111 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 170
Query: 133 SSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA-FKAFDMQALINKINK 189
+ G +M PE + + S SD+W G C++E+ F+ +I +I
Sbjct: 171 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 230
Query: 190 SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P+P L+ +P RP EL
Sbjct: 231 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 265
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 6/215 (2%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
+D R QE + + +P IV+ E V II+ C G++ + +
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGEL-RSFLQVRKYS 107
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
L + QL AL YL + +HRD+ N+ ++ + ++LGDFGL++ +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 167
Query: 133 SSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA-FKAFDMQALINKINK 189
+ G +M PE + + S SD+W G C++E+ F+ +I +I
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 190 SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P+P L+ +P RP EL
Sbjct: 228 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 167 EMSA 170
M A
Sbjct: 200 AMLA 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 81 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 138
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 167 EMSA 170
M A
Sbjct: 199 AMLA 202
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 6/215 (2%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
+D R QE + + +P IV+ E V II+ C G++ + +
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGEL-RSFLQVRKYS 107
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
L + QL AL YL + +HRD+ N+ ++ + ++LGDFGL++ +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 167
Query: 133 SSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA-FKAFDMQALINKINK 189
+ G +M PE + + S SD+W G C++E+ F+ +I +I
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 190 SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P+P L+ +P RP EL
Sbjct: 228 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 67/124 (54%), Gaps = 6/124 (4%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
+ + YC GG++ + I+ G+ PE ++ QL+ + YLH I HRD+K N+ L
Sbjct: 82 LFLEYCSGGELFDRIEPDIGM--PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139
Query: 111 RDQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSK-SDIWSLGCCVY 166
++++ DFGLA + ++ L + + GT Y+ PELL + ++ D+WS G +
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 167 EMSA 170
M A
Sbjct: 200 AMLA 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 6/215 (2%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
+D R QE + + +P IV+ E V II+ C G++ + +
Sbjct: 56 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGEL-RSFLQVRKYS 112
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
L + QL AL YL + +HRD+ N+ ++ + ++LGDFGL++ +
Sbjct: 113 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 172
Query: 133 SSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA-FKAFDMQALINKINK 189
+ G +M PE + + S SD+W G C++E+ F+ +I +I
Sbjct: 173 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 232
Query: 190 SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P+P L+ +P RP EL
Sbjct: 233 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 88/174 (50%), Gaps = 15/174 (8%)
Query: 9 LARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMA------ 62
L +D AR+ H+E EL++ +++ IV++ VE G + ++ Y + GD+
Sbjct: 51 LKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-GDPLIMVFEYMKHGDLNKFLRAH 109
Query: 63 --EAIKKANG---VHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
+A+ A G + ++ Q+ + YL + H +HRD+ N + + +++
Sbjct: 110 GPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKI 169
Query: 118 GDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
GDFG+++ + S D + + +M PE + + ++SD+WSLG ++E+
Sbjct: 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 6/215 (2%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
+D R QE + + +P IV+ E V II+ C G++ + +
Sbjct: 48 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGEL-RSFLQVRKYS 104
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
L + QL AL YL + +HRD+ N+ ++ + ++LGDFGL++ +
Sbjct: 105 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY 164
Query: 133 SSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA-FKAFDMQALINKINK 189
+ G +M PE + + S SD+W G C++E+ F+ +I +I
Sbjct: 165 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 224
Query: 190 SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P+P L+ +P RP EL
Sbjct: 225 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 259
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 344
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 404
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK PE RP+
Sbjct: 405 ECPESLHDLMCQCWRKEPEERPT 427
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 46 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 100
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HRD+ NI + + +++GDFG
Sbjct: 101 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 160 LTKVLPQDKEFFK-VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 62 QEAQVMKKIRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 178
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK+PE RP+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPT 261
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 41/223 (18%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRNPFI-----VEYKDSWVEKGCYVCIIIGYCEGGDM 61
+++ R + RSA E +++ +++N I V+Y ++ ++C+I G +
Sbjct: 65 VKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD-HMCLIFEPL-GPSL 122
Query: 62 AEAIKK--ANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFL---------- 109
E I + NG H + KL + +++L ALNYL + H D+K NI L
Sbjct: 123 YEIITRNNYNGFHIEDIKL--YCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLI 180
Query: 110 ---------------TRDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGS 154
T+ I+L DFG A D S++ T Y PE++ ++ +
Sbjct: 181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATF--KSDYHGSIINTRQYRAPEVILNLGWDV 238
Query: 155 KSDIWSLGCCVYEMSAQKAAFKAFD-MQALINKINKSIVAPLP 196
SD+WS GC + E+ F+ + M+ L + +SI+ P+P
Sbjct: 239 SSDMWSFGCVLAELYTGSLLFRTHEHMEHL--AMMESIIQPIP 279
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 344
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 404
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK PE RP+
Sbjct: 405 ECPESLHDLMCQCWRKEPEERPT 427
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCY-VCIIIGYCEGGDMAEAI-KKANGVHFPEEKLC 79
+E+E++ + + IV+YK E G + +I+ + G + E + K N ++ ++
Sbjct: 72 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ--L 129
Query: 80 KWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP 139
K+ VQ+ ++YL + +HRD+ N+ + + +++GDFGL K + +D +V
Sbjct: 130 KYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 189
Query: 140 S----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ PE L + SD+WS G ++E+
Sbjct: 190 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 6/215 (2%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
+D R QE + + +P IV+ E V II+ C G++ + +
Sbjct: 431 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGEL-RSFLQVRKFS 487
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
L + QL AL YL + +HRD+ N+ ++ ++LGDFGL++ +
Sbjct: 488 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY 547
Query: 133 SSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA-FKAFDMQALINKINK 189
+ G +M PE + + S SD+W G C++E+ F+ +I +I
Sbjct: 548 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 607
Query: 190 SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P+P L+ +P RP EL
Sbjct: 608 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD-LASSVVGTP-S 140
+Q+ A+ YL + + +HRD+ NI + + ++LGDFGL++ + +D +SV P
Sbjct: 132 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 191
Query: 141 YMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
+M PE + + + SD+W C++E +S K F + + +I + K P P +
Sbjct: 192 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 251
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLC 226
L+ +P RP EL+C
Sbjct: 252 PPVLYTLMTRCWDYDPSDRPRFTELVC 278
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 7/221 (3%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
A T+R RR E ++ + +P I+ + V +G I+ Y E G + ++ +
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGV-VTRGRLAMIVTEYMENGSLDTFLRTHD 145
Query: 70 GVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD 129
G F +L L + + YL +HRD+ N+ + + ++ DFGL+++L D
Sbjct: 146 G-QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 130 -DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALI 184
D A + G + PE +A + S SD+WS G ++E+ A + + + +I
Sbjct: 205 PDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 185 NKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ + + P P A L+ K+ RP ++++
Sbjct: 265 SSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD-LASSVVGTP-S 140
+Q+ A+ YL + + +HRD+ NI + + ++LGDFGL++ + +D +SV P
Sbjct: 116 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 175
Query: 141 YMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
+M PE + + + SD+W C++E +S K F + + +I + K P P +
Sbjct: 176 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 235
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLC 226
L+ +P RP EL+C
Sbjct: 236 PPVLYTLMTRCWDYDPSDRPRFTELVC 262
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 83 VQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD-LASSVVGTP-S 140
+Q+ A+ YL + + +HRD+ NI + + ++LGDFGL++ + +D +SV P
Sbjct: 120 LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK 179
Query: 141 YMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
+M PE + + + SD+W C++E +S K F + + +I + K P P +
Sbjct: 180 WMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 239
Query: 200 SGAFRGLVKSMLRKNPEFRPSAAELLC 226
L+ +P RP EL+C
Sbjct: 240 PPVLYTLMTRCWDYDPSDRPRFTELVC 266
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 78/153 (50%), Gaps = 8/153 (5%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCY-VCIIIGYCEGGDMAEAI-KKANGVHFPEEKLC 79
+E+E++ + + IV+YK E G + +I+ + G + E + K N ++ ++
Sbjct: 60 KEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ--L 117
Query: 80 KWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP 139
K+ VQ+ ++YL + +HRD+ N+ + + +++GDFGL K + +D +V
Sbjct: 118 KYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 177
Query: 140 S----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ PE L + SD+WS G ++E+
Sbjct: 178 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 210
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 7 IRLARQTDRARRSAHQEMELISRVR-----NPFIVEYKDSWVEKGCYVCIIIGYCEGGDM 61
+++ + DR +A E++++ + + F W E ++CI+ G
Sbjct: 45 VKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLST 103
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT----------- 110
+ IK+ + F + + K Q+ ++N+LH+N + H D+K NI
Sbjct: 104 YDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPK 163
Query: 111 --RDQ------DIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLG 162
RD+ DI++ DFG A D+ S++V Y PE++ + + D+WS+G
Sbjct: 164 IKRDERTLINPDIKVVDFGSATY--DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIG 221
Query: 163 CCVYEMSAQKAAFKAFDMQALINKINKSIVAPLP 196
C + E F D + + + + I+ PLP
Sbjct: 222 CILIEYYLGFTVFPTHDSKEHLAMMER-ILGPLP 254
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 55 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 112
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 113 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 171
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 172 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 231
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK PE RP+
Sbjct: 232 ECPESLHDLMCQCWRKEPEERPT 254
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 178
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK+PE RP+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPT 261
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 59 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 117 SAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 175
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 235
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK PE RP+
Sbjct: 236 ECPESLHDLMCQCWRKEPEERPT 258
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 6/215 (2%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
+D R QE + + +P IV+ E V II+ C G++ + +
Sbjct: 51 SDSVREKFLQEALTMRQFDHPHIVKLIGVITENP--VWIIMELCTLGEL-RSFLQVRKFS 107
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
L + QL AL YL + +HRD+ N+ ++ ++LGDFGL++ +
Sbjct: 108 LDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY 167
Query: 133 SSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA-FKAFDMQALINKINK 189
+ G +M PE + + S SD+W G C++E+ F+ +I +I
Sbjct: 168 KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN 227
Query: 190 SIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
P+P L+ +P RP EL
Sbjct: 228 GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 262
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 9/232 (3%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
++V K + T++ RR E ++ + +P ++ + V K V II + E G
Sbjct: 36 IFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGV-VTKSTPVMIITEFMENGS 94
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDF 120
+ +++ +G F +L L + + YL + +HR + NI + + ++ DF
Sbjct: 95 LDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDF 153
Query: 121 GLAKML---ISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKA 173
GL++ L SD +S +G + PE + + S SD+WS G ++E MS +
Sbjct: 154 GLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGER 213
Query: 174 AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ Q +IN I + P P A L+ +K+ RP +++
Sbjct: 214 PYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV 265
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL 131
H P + L K++V + + + YL + LHRD+ N L D + + DFGL+K + S D
Sbjct: 143 HIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 132 --ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ 171
+ P ++ E LAD Y SKSD+W+ G ++E++ +
Sbjct: 203 YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 113/263 (42%), Gaps = 40/263 (15%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
+K+IRL + + +A +E+ L+ +++ I+E K S + + +I Y E D+ +
Sbjct: 64 IKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELK-SVIHHNHRLHLIFEYAEN-DLKK 121
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD-----IRLG 118
+ K V + +L QL+ +N+ H+ LHRD+K N+ L+ +++G
Sbjct: 122 YMDKNPDVSM--RVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIG 179
Query: 119 DFGLAKML-ISDDLASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEM-------- 168
DFGLA+ I + + T Y PE LL Y + DIWS+ C EM
Sbjct: 180 DFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFP 239
Query: 169 --SAQKAAFKAFDMQALINKINKSIVAPLPTVYSG--AFRG-----------------LV 207
S FK F++ L + V LP FRG L+
Sbjct: 240 GDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLL 299
Query: 208 KSMLRKNPEFRPSAAELLCHPHL 230
+ML +P R SA L HP+
Sbjct: 300 TAMLEMDPVKRISAKNALEHPYF 322
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 53 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 110
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 111 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 169
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 229
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK+PE RP+
Sbjct: 230 ECPESLHDLMCQCWRKDPEERPT 252
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 7/221 (3%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
A T+R RR E ++ + +P I+ + V +G I+ Y E G + ++ +
Sbjct: 87 AGYTERQRRDFLSEASIMGQFDHPNIIRLEGV-VTRGRLAMIVTEYMENGSLDTFLRTHD 145
Query: 70 GVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD 129
G F +L L + + YL +HRD+ N+ + + ++ DFGL+++L D
Sbjct: 146 G-QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204
Query: 130 -DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALI 184
D A + G + PE +A + S SD+WS G ++E+ A + + + +I
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVI 264
Query: 185 NKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ + + P P A L+ K+ RP ++++
Sbjct: 265 SSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 48 YVCIIIGYCEGGDMAEAIKKA---NGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKC 104
Y+ +I+ Y D + K+ +G P + ++ QL A+ ++H+ I HRD+K
Sbjct: 112 YLNVIMEYVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKP 169
Query: 105 SNIFL-TRDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPEL-LADIPYGSKSDIWSLG 162
N+ + ++D ++L DFG AK LI + + + + + Y PEL L Y D+WS+G
Sbjct: 170 QNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIG 229
Query: 163 CCVYEMSAQKAAFKAFDMQALINKINKSIVAP----------------LPTVYSGAFR-- 204
C E+ K F + +I + + P PT+ + +R
Sbjct: 230 CVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKI 289
Query: 205 ----------GLVKSMLRKNPEFRPSAAELLCHP 228
L++ +LR P+ R + E + HP
Sbjct: 290 LPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHP 323
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 50 CIIIGYCEGGDMAEAIKK-ANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+I+ +C G + +++ +N PE + L ++ +N+L N I+HR++K NI
Sbjct: 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
Query: 109 LTRDQD----IRLGDFGLAKMLISDDLASSVVGTPSYMCPELLA--------DIPYGSKS 156
+D +L DFG A+ L D+ + GT Y+ P++ YG+
Sbjct: 145 RVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATV 204
Query: 157 DIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKS 209
D+WS+G Y + F+ F+ ++ I+ P SGA G+ K+
Sbjct: 205 DLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP---SGAISGVQKA 254
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 17/137 (12%)
Query: 49 VCIIIGYCEGGDMAEAIKKA---------NGVHFPEEKLCK-----WLVQLLMALNYLHA 94
V +I YC GD+ +++ N H PEE+L + Q+ + +L +
Sbjct: 125 VLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLAS 184
Query: 95 NHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD--LASSVVGTP-SYMCPELLADIP 151
+ +HRDV N+ LT ++GDFGLA+ +++D + P +M PE + D
Sbjct: 185 KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCV 244
Query: 152 YGSKSDIWSLGCCVYEM 168
Y +SD+WS G ++E+
Sbjct: 245 YTVQSDVWSYGILLWEI 261
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 59 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMNKGSLLDFLKGETGKYLRLPQLVDM 116
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 117 SAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEWTARQGAKFP 175
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 176 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 235
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK PE RP+
Sbjct: 236 ECPESLHDLMCQCWRKEPEERPT 258
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 51 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 108
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 109 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 167
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 168 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 227
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK+PE RP+
Sbjct: 228 ECPESLHDLMCQCWRKDPEERPT 250
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 178
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK+PE RP+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPT 261
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 8 RLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCY------VCIIIGYCEGGDM 61
+L T+ R +E+E++ +++ IV+YK CY + +I+ Y G +
Sbjct: 47 KLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGV-----CYSAGRRNLKLIMEYLPYGSL 101
Query: 62 AEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
+ ++K + KL ++ Q+ + YL +HR++ NI + + +++GDFG
Sbjct: 102 RDYLQK-HKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFG 160
Query: 122 LAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
L K+L D V P + PE L + + SD+WS G +YE+
Sbjct: 161 LTKVLPQDK-EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 27/186 (14%)
Query: 9 LARQTDRARRSAHQEMELISRVRNP----FI-VEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
L R + +R+ +E++++ + +P FI V YKD + I Y +GG +
Sbjct: 43 LIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN------FITEYIKGGTLRG 96
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
IK + +P + + + + YLH+ +I+HRD+ N + ++++ + DFGLA
Sbjct: 97 IIKSMDS-QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLA 155
Query: 124 KMLISDDLA---------------SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
++++ + +VVG P +M PE++ Y K D++S G + E+
Sbjct: 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
Query: 169 SAQKAA 174
+ A
Sbjct: 216 IGRVNA 221
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 228 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVGEYMSKGSLLDFLKGETGKYLRLPQLVDM 285
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 286 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 344
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 345 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 404
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK PE RP+
Sbjct: 405 ECPESLHDLMCQCWRKEPEERPT 427
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 117/241 (48%), Gaps = 17/241 (7%)
Query: 15 RARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFP 74
+ + E+ +++++ + +++ D++ K + +++ Y +GG++ + I + +
Sbjct: 128 KDKEEVKNEISVMNQLDHANLIQLYDAFESKND-IVLVMEYVDGGELFDRIIDES-YNLT 185
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF-LTRD-QDIRLGDFGLAKMLISDDLA 132
E ++ Q+ + ++H +ILH D+K NI + RD + I++ DFGLA+ +
Sbjct: 186 ELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245
Query: 133 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GTP ++ PE++ +D+WS+G Y + + + F + +N +I+
Sbjct: 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN----NIL 301
Query: 193 APLPTVYSGAFRGL-------VKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPR 245
A + F+ + + +L K +R SA+E L HP L + L H +L+ +
Sbjct: 302 ACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKL--HSRLSAQK 359
Query: 246 R 246
+
Sbjct: 360 K 360
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T+ ++ QE+++ ++ ++ +VE + G +C++ Y G + + + +G
Sbjct: 61 TEELKQQFDQEIKVXAKCQHENLVELL-GFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 73 -FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL 131
CK +N+LH NH +HRD+K +NI L ++ DFGLA+ S+
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA--SEKF 177
Query: 132 A-----SSVVGTPSYMCPELL-ADIPYGSKSDIWSLGCCVYEM 168
A S +VGT +Y PE L +I KSDI+S G + E+
Sbjct: 178 AQXVXXSRIVGTTAYXAPEALRGEIT--PKSDIYSFGVVLLEI 218
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 104/219 (47%), Gaps = 15/219 (6%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E+ +++ R+ I+ +S+ E + +I + G D+ E I + E ++ +
Sbjct: 50 KEISILNIARHRNILHLHESF-ESMEELVMIFEFISGLDIFERIN-TSAFELNEREIVSY 107
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLT--RDQDIRLGDFGLAKMLISDDLASSVVGTP 139
+ Q+ AL +LH+++I H D++ NI R I++ +FG A+ L D + P
Sbjct: 108 VHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP 167
Query: 140 SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVY 199
Y PE+ + +D+WSLG VY + + F A Q +I ++I+ T
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII----ENIMNAEYTFD 223
Query: 200 SGAFRGL-------VKSMLRKNPEFRPSAAELLCHPHLQ 231
AF+ + V +L K + R +A+E L HP L+
Sbjct: 224 EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I++ Y G + + +K G + +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 178
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK+PE RP+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPT 261
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
III + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ Y E G + ++K +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHDA-Q 143
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGLA++L D +
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEA 203
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 30/168 (17%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKG-CYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
R +E+E++ + + IV+YK ++G V +++ Y G + + + +
Sbjct: 55 RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH------- 107
Query: 76 EKLCKWLVQLLM-------ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML-- 126
C L QLL+ + YLHA H +HR + N+ L D+ +++GDFGLAK +
Sbjct: 108 ---CVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 164
Query: 127 ------ISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +D S V + PE L + + SD+WS G +YE+
Sbjct: 165 GHEYYRVREDGDSPVF----WYAPECLKECKFYYASDVWSFGVTLYEL 208
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 229 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 286
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGL + LI D+ ++ G
Sbjct: 287 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGR-LIEDNEYTARQGAKFP 345
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 346 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 405
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK+PE RP+
Sbjct: 406 ECPESLHDLMCQCWRKDPEERPT 428
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
III + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 86 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 88/175 (50%), Gaps = 20/175 (11%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCY-VCIIIGYCEGGDMAEAIK-----KANG-- 70
SA +E+ L+ +++P ++ + ++ V ++ Y E D+ IK KAN
Sbjct: 64 SACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKP 122
Query: 71 VHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRD----QDIRLGDFGLAKML 126
V P + L Q+L ++YLHAN +LHRD+K +NI + + +++ D G A++
Sbjct: 123 VQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 127 IS-----DDLASSVVGTPSYMCPELLADIPYGSKS-DIWSLGCCVYEMSAQKAAF 175
S DL VV T Y PELL + +K+ DIW++GC E+ + F
Sbjct: 183 NSPLKPLADL-DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
III + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 87 IIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 146
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE 167
+ +++ DFGL++ L++ D ++ G + PE LA + KSD+W+ G ++E
Sbjct: 147 ENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 205
Query: 168 MSAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
++ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
III + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 91 IIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 150
Query: 111 RDQDIRLGDFGLAKMLISDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 151 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 30/168 (17%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKG-CYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
R +E+E++ + + IV+YK ++G V +++ Y G + + + +
Sbjct: 54 RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH------- 106
Query: 76 EKLCKWLVQLLM-------ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML-- 126
C L QLL+ + YLHA H +HR + N+ L D+ +++GDFGLAK +
Sbjct: 107 ---CVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPE 163
Query: 127 ------ISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +D S V + PE L + + SD+WS G +YE+
Sbjct: 164 GHEYYRVREDGDSPVF----WYAPECLKECKFYYASDVWSFGVTLYEL 207
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 45/223 (20%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
V I+ Y E D+A +++ EE ++ QLL L Y+H+ ++LHRD+K +N+F
Sbjct: 97 VYIVQEYMET-DLANVLEQGP---LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLF 152
Query: 109 L-TRDQDIRLGDFGLAKMLI-----SDDLASSVVGTPSYMCPELLADIP--YGSKSDIWS 160
+ T D +++GDFGLA+++ L+ +V T Y P LL P Y D+W+
Sbjct: 153 INTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLS-PNNYTKAIDMWA 210
Query: 161 LGCCVYEMSAQKAAFKAF-------------------DMQALINKI-----------NKS 190
GC EM K F D Q L++ I +K
Sbjct: 211 AGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKP 270
Query: 191 IVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPY 233
+ LP + A ++ +L +P R +A E L HP++ Y
Sbjct: 271 LTQLLPGISREAV-DFLEQILTFSPMDRLTAEEALSHPYMSIY 312
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 12 QTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
+ D ++ E +++++R+ +V+ VE+ + I+ Y G + + ++
Sbjct: 44 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 103
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL 131
+ L K+ + + A+ YL N+ +HRD+ N+ ++ D ++ DFGL K
Sbjct: 104 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE------ 157
Query: 132 ASSVVGTP----SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINK 186
ASS T + PE L + + +KSD+WS G ++E+ S + + ++ ++ +
Sbjct: 158 ASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 217
Query: 187 INKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ K P A ++K+ + RPS +L
Sbjct: 218 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 255
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM 119
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 120 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 178
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK+PE RP+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPT 261
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ + I+ Y G + + +K G + +L
Sbjct: 52 QEAQVMKKLRHEKLVQLYAVVSEEP--IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM 109
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 110 AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEXTARQGAKFP 168
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 169 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 228
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK PE RP+
Sbjct: 229 ECPESLHDLMCQCWRKEPEERPT 251
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 47/204 (23%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-- 132
++ + ++ Q L A+ LH ++++HRD+K SN+ + + D+++ DFGLA+++ D+ A
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAAD 168
Query: 133 -----------SSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDM 180
+ V T Y PE +L Y D+WS GC + E+ ++ F D
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
Query: 181 QALINKINKSIVAP-----LPTVYSGAFRGLVKS-------------------------- 209
+ + I I P L + S R +KS
Sbjct: 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQR 288
Query: 210 MLRKNPEFRPSAAELLCHPHLQPY 233
ML +P R +A E L HP+LQ Y
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTY 312
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 96/203 (47%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
QE +++ ++R+ +V+ E+ Y I+ Y G + + +K G + +L
Sbjct: 62 QEAQVMKKLRHEKLVQLYAVVSEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM 119
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD+ +NI + + ++ DFGLA+ LI D+ ++ G
Sbjct: 120 AAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFP 178
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E++ + + + + +++++ + P P
Sbjct: 179 IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP 238
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ RK+PE RP+
Sbjct: 239 ECPESLHDLMCQCWRKDPEERPT 261
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ Y E G + ++K +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHDA-Q 143
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 47/204 (23%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASS 134
++ + ++ Q L A+ LH ++++HRD+K SN+ + + D+++ DFGLA+++ D+ A+
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAAD 168
Query: 135 -------------VVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDM 180
V T Y PE +L Y D+WS GC + E+ ++ F D
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
Query: 181 QALINKINKSIVAP-----LPTVYSGAFRGLVKS-------------------------- 209
+ + I I P L + S R +KS
Sbjct: 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQR 288
Query: 210 MLRKNPEFRPSAAELLCHPHLQPY 233
ML +P R +A E L HP+LQ Y
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTY 312
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 47/204 (23%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA-- 132
++ + ++ Q L A+ LH ++++HRD+K SN+ + + D+++ DFGLA+++ D+ A
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII--DESAAD 168
Query: 133 -----------SSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDM 180
+ V T Y PE +L Y D+WS GC + E+ ++ F D
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY 228
Query: 181 QALINKINKSIVAP-----LPTVYSGAFRGLVKS-------------------------- 209
+ + I I P L + S R +KS
Sbjct: 229 RHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQR 288
Query: 210 MLRKNPEFRPSAAELLCHPHLQPY 233
ML +P R +A E L HP+LQ Y
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTY 312
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + + V K V I+ Y E G + +KK +G
Sbjct: 63 TEKQRRDFLGEASIMGQFDHPNII-HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG-Q 120
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 121 FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 180
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E +S + + Q +I +
Sbjct: 181 AYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV 240
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ P P A L+ +K RP E++
Sbjct: 241 EEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIV 278
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 7/221 (3%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
A TD+ RR E ++ + +P I+ + + V K V II Y E G + ++K +
Sbjct: 67 AGYTDKQRRDFLSEASIMGQFDHPNII-HLEGVVTKCKPVMIITEYMENGSLDAFLRKND 125
Query: 70 GVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD 129
G F +L L + + YL +HRD+ NI + + ++ DFG++++L D
Sbjct: 126 G-RFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 130 -DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALI 184
+ A + G + PE +A + S SD+WS G ++E MS + + Q +I
Sbjct: 185 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 244
Query: 185 NKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
I + P P A L+ +K RP +++
Sbjct: 245 KAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIV 285
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 81/161 (50%), Gaps = 16/161 (9%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKG-CYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
R QE++++ + + I++YK ++G + +++ Y G + + + + +
Sbjct: 60 RSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGL 116
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML--------I 127
+L + Q+ + YLHA H +HR++ N+ L D+ +++GDFGLAK + +
Sbjct: 117 AQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 128 SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+D S V + PE L + + SD+WS G +YE+
Sbjct: 177 REDGDSPVF----WYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 7 IRLARQTDRARRSAHQEMELISRV--RNP----FIVEYKDSWVEKGCYVCIIIGYCEGGD 60
+++ + ++ + +A E+ ++ ++ ++P V+ D W + ++CI G
Sbjct: 64 LKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFD-WFDYHGHMCISFELL-GLS 121
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT---------- 110
+ +K N + +P ++ QL A+ +LH N + H D+K NI
Sbjct: 122 TFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNL 181
Query: 111 ---RDQD------IRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSL 161
RD+ +R+ DFG A + S++V T Y PE++ ++ + D+WS+
Sbjct: 182 EKKRDERSVKSTAVRVVDFGSATF--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSI 239
Query: 162 GCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPT 197
GC ++E F+ D + + + + I+ P+P+
Sbjct: 240 GCIIFEYYVGFTLFQTHDNREHLAMMER-ILGPIPS 274
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ Y E G + ++K +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHDA-Q 143
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 7/221 (3%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
A TD+ RR E ++ + +P I+ + + V K V II Y E G + ++K +
Sbjct: 52 AGYTDKQRRDFLSEASIMGQFDHPNII-HLEGVVTKCKPVMIITEYMENGSLDAFLRKND 110
Query: 70 GVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD 129
G F +L L + + YL +HRD+ NI + + ++ DFG++++L D
Sbjct: 111 G-RFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 169
Query: 130 -DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALI 184
+ A + G + PE +A + S SD+WS G ++E MS + + Q +I
Sbjct: 170 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 229
Query: 185 NKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
I + P P A L+ +K RP +++
Sbjct: 230 KAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIV 270
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ Y E G + ++K +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHDA-Q 143
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ Y E G + ++K +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHDA-Q 143
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ Y E G + ++K +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHDA-Q 143
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL ++L D +
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKD-SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E++++ + + FIV+Y+ S+ + +++ Y G + + +++ +
Sbjct: 55 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDA 113
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+L + Q+ + YL + +HRD+ NI + + +++ DFGLAK+L D V
Sbjct: 114 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYV 172
Query: 136 VGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
V P + PE L+D + +SD+WS G +YE+
Sbjct: 173 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ Y E G + ++K +
Sbjct: 84 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHDA-Q 141
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 142 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 201
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 202 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 261
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 262 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ Y E G + ++K +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHDA-Q 143
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 165 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 224
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 225 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 261
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 163 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 222
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 223 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 259
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKD-SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E++++ + + FIV+Y+ S+ + +++ Y G + + +++ +
Sbjct: 52 QRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR-HRARLDA 110
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+L + Q+ + YL + +HRD+ NI + + +++ DFGLAK+L D V
Sbjct: 111 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DXXV 169
Query: 136 VGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
V P + PE L+D + +SD+WS G +YE+
Sbjct: 170 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 206 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 265
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 266 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 302
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 7/221 (3%)
Query: 10 ARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKAN 69
A TD+ RR E ++ + +P I+ + + V K V II Y E G + ++K +
Sbjct: 46 AGYTDKQRRDFLSEASIMGQFDHPNII-HLEGVVTKCKPVMIITEYMENGSLDAFLRKND 104
Query: 70 GVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD 129
G F +L L + + YL +HRD+ NI + + ++ DFG++++L D
Sbjct: 105 G-RFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 163
Query: 130 -DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALI 184
+ A + G + PE +A + S SD+WS G ++E MS + + Q +I
Sbjct: 164 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI 223
Query: 185 NKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
I + P P A L+ +K RP +++
Sbjct: 224 KAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIV 264
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 220
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 161 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 220
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 221 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 257
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 149
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 150 VSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 208
Query: 166 YEMSAQ-KAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPS 220
E+ + + +I + + P L++ ++ PE RP+
Sbjct: 209 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 264
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 49 VCIIIGYCEGGDM-------AEA-IKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHR 100
V +I YC GD+ AEA + K +G L + Q+ + +L + + +HR
Sbjct: 125 VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 184
Query: 101 DVKCSNIFLTRDQDIRLGDFGLAKMLISDD--LASSVVGTP-SYMCPELLADIPYGSKSD 157
DV N+ LT ++GDFGLA+ +++D + P +M PE + D Y +SD
Sbjct: 185 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 244
Query: 158 IWSLGCCVYEM 168
+WS G ++E+
Sbjct: 245 VWSYGILLWEI 255
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 148 VSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 166 YEMSAQ-KAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPS 220
E+ + + +I + + P L++ ++ PE RP+
Sbjct: 207 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 12 QTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
+ D ++ E +++++R+ +V+ VE+ + I+ Y G + + ++
Sbjct: 38 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 97
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL 131
+ L K+ + + A+ YL N+ +HRD+ N+ ++ D ++ DFGL K
Sbjct: 98 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE------ 151
Query: 132 ASSVVGTP----SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINK 186
ASS T + PE L + + +KSD+WS G ++E+ S + + ++ ++ +
Sbjct: 152 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 211
Query: 187 INKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ K P A ++K+ + RPS +L
Sbjct: 212 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 249
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 155 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 214
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 215 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 251
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 49 VCIIIGYCEGGDM-------AEA-IKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHR 100
V +I YC GD+ AEA + K +G L + Q+ + +L + + +HR
Sbjct: 117 VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 176
Query: 101 DVKCSNIFLTRDQDIRLGDFGLAKMLISDD--LASSVVGTP-SYMCPELLADIPYGSKSD 157
DV N+ LT ++GDFGLA+ +++D + P +M PE + D Y +SD
Sbjct: 177 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 236
Query: 158 IWSLGCCVYEM 168
+WS G ++E+
Sbjct: 237 VWSYGILLWEI 247
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 12 QTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
+ D ++ E +++++R+ +V+ VE+ + I+ Y G + + ++
Sbjct: 53 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 112
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL 131
+ L K+ + + A+ YL N+ +HRD+ N+ ++ D ++ DFGL K
Sbjct: 113 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE------ 166
Query: 132 ASSVVGTP----SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINK 186
ASS T + PE L + + +KSD+WS G ++E+ S + + ++ ++ +
Sbjct: 167 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 226
Query: 187 INKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ K P A ++K+ + RPS +L
Sbjct: 227 VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 264
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKD-SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E++++ + + FIV+Y+ S+ + +++ Y G + + +++ +
Sbjct: 56 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDA 114
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+L + Q+ + YL + +HRD+ NI + + +++ DFGLAK+L D V
Sbjct: 115 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYV 173
Query: 136 VGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
V P + PE L+D + +SD+WS G +YE+
Sbjct: 174 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 150
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 151 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 150
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 151 VSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 209
Query: 166 YEMSAQ-KAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPS 220
E+ + + +I + + P L++ ++ PE RP+
Sbjct: 210 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 265
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 81/158 (51%), Gaps = 8/158 (5%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKD-SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+R +E++++ + + FIV+Y+ S+ + +++ Y G + + +++ +
Sbjct: 68 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR-HRARLDA 126
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+L + Q+ + YL + +HRD+ NI + + +++ DFGLAK+L D V
Sbjct: 127 SRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK-DYYV 185
Query: 136 VGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
V P + PE L+D + +SD+WS G +YE+
Sbjct: 186 VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 81/161 (50%), Gaps = 16/161 (9%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKG-CYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
R QE++++ + + I++YK ++G + +++ Y G + + + + +
Sbjct: 60 RSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS---IGL 116
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML--------I 127
+L + Q+ + YLH+ H +HR++ N+ L D+ +++GDFGLAK + +
Sbjct: 117 AQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV 176
Query: 128 SDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+D S V + PE L + + SD+WS G +YE+
Sbjct: 177 REDGDSPVF----WYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 132 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 191
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 192 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 228
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 140 SYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKA-AFKAFDMQALINKINKSIVAPLPT 197
+ PELL D+ Y D+WSLGC M +K F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 198 VYSGAFR 204
VY +R
Sbjct: 250 VYLNKYR 256
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 132 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 191
Query: 140 SYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKA-AFKAFDMQALINKINKSIVAPLPT 197
+ PELL D+ Y D+WSLGC M +K F D + KI K +
Sbjct: 192 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 251
Query: 198 VYSGAFR 204
VY +R
Sbjct: 252 VYLNKYR 258
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 151
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 152 VSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 210
Query: 166 YEMSAQ-KAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPS 220
E+ + + +I + + P L++ ++ PE RP+
Sbjct: 211 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 266
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 135 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 194
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 195 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 231
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 146 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 205
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 206 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 242
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 111 RDQDIRLGDFGLAKMLISDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 140 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 199
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 200 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 236
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HR++ N +
Sbjct: 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 352
Query: 111 RDQDIRLGDFGLAKMLISDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 413 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 139 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 198
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 199 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 235
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 140 SYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKA-AFKAFDMQALINKINKSIVAPLPT 197
+ PELL D+ Y D+WSLGC M +K F D + KI K +
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 250
Query: 198 VYSGAFR 204
VY +R
Sbjct: 251 VYLNKYR 257
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 5/176 (2%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 142 VSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 166 YEMSAQ-KAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPS 220
E+ + + +I + + P L++ ++ PE RP+
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 83/189 (43%), Gaps = 5/189 (2%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 127 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKINKSI 191
G +M E + Y +SD+WS G V+E M+ + + + + K
Sbjct: 187 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 246
Query: 192 VAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPL 251
P P + + +++ + + RP EL+ +L + G R P
Sbjct: 247 RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPS 306
Query: 252 EWSDSNFKK 260
+DSNF +
Sbjct: 307 P-TDSNFYR 314
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 190
Query: 140 SYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKA-AFKAFDMQALINKINKSIVAPLPT 197
+ PELL D+ Y D+WSLGC M +K F D + KI K +
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 250
Query: 198 VYSGAFR 204
VY +R
Sbjct: 251 VYLNKYR 257
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 100/218 (45%), Gaps = 11/218 (5%)
Query: 12 QTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
+ D ++ E +++++R+ +V+ VE+ + I+ Y G + + ++
Sbjct: 225 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 284
Query: 72 HFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL 131
+ L K+ + + A+ YL N+ +HRD+ N+ ++ D ++ DFGL K
Sbjct: 285 VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKE------ 338
Query: 132 ASSVVGTP----SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINK 186
ASS T + PE L + + +KSD+WS G ++E+ S + + ++ ++ +
Sbjct: 339 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR 398
Query: 187 INKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ K P A ++K+ + RP+ +L
Sbjct: 399 VEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQL 436
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 150
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 151 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 5/190 (2%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKINKSI 191
G +M E + Y +SD+WS G V+E M+ + + + + K
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
Query: 192 VAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPL 251
P P + + +++ + + RP EL+ +L + G R P
Sbjct: 240 RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPS 299
Query: 252 EWSDSNFKKT 261
+DSNF +
Sbjct: 300 P-TDSNFYRA 308
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 5/178 (2%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 150
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE 167
+ +++ DFGL++ L++ D ++ G + PE LA + KSD+W+ G ++E
Sbjct: 151 ENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 209
Query: 168 MSAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
++ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 210 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 131 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 190
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 191 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 227
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 140 SYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKA-AFKAFDMQALINKINKSIVAPLPT 197
+ PELL D+ Y D+WSLGC M +K F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 198 VYSGAFR 204
VY +R
Sbjct: 250 VYLNKYR 256
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ Y E G + ++K +
Sbjct: 57 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHDA-Q 114
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 115 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 174
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 175 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 235 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 140 SYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKA-AFKAFDMQALINKINKSIVAPLPT 197
+ PELL D+ Y D+WSLGC M +K F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 198 VYSGAFR 204
VY +R
Sbjct: 250 VYLNKYR 256
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HR++ N +
Sbjct: 332 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 391
Query: 111 RDQDIRLGDFGLAKMLISDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 392 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 452 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 140 SYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKA-AFKAFDMQALINKINKSIVAPLPT 197
+ PELL D+ Y D+WSLGC M +K F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 198 VYSGAFR 204
VY +R
Sbjct: 250 VYLNKYR 256
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 140 SYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKA-AFKAFDMQALINKINKSIVAPLPT 197
+ PELL D+ Y D+WSLGC M +K F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 198 VYSGAFR 204
VY +R
Sbjct: 250 VYLNKYR 256
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 98/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ Y E G + ++K +
Sbjct: 74 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHDA-Q 131
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 132 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 191
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 192 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 252 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 289
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 143
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 144 VSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 202
Query: 166 YEM 168
E+
Sbjct: 203 TEI 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 90 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 149
Query: 111 RDQDIRLGDFGLAKMLISDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 210 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSR 186
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 150
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 151 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 210
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 211 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 128 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 187
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 188 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 224
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 148 VSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 206
Query: 166 YEM 168
E+
Sbjct: 207 TEI 209
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 189
Query: 140 SYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKA-AFKAFDMQALINKINKSIVAPLPT 197
+ PELL D+ Y D+WSLGC M +K F D + KI K +
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 249
Query: 198 VYSGAFR 204
VY +R
Sbjct: 250 VYLNKYR 256
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 5/178 (2%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
III + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 84 IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 143
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE 167
+ +++ DFGL++ L++ D ++ G + PE LA + KSD+W+ G ++E
Sbjct: 144 ENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
Query: 168 MSAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
++ + + D + + K P L+++ + NP RPS AE+
Sbjct: 203 IATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 146
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 147 VSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 205
Query: 166 YEM 168
E+
Sbjct: 206 TEI 208
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 147
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 148 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 208 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI-RLGDFGLAKMLISDDLASSVVGTP 139
++ QL +L Y+H+ I HRD+K N+ L D + +L DFG AK L+ + S + +
Sbjct: 127 YMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSR 186
Query: 140 SYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
Y PEL+ Y S D+WS GC + E+ + F
Sbjct: 187 YYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF 223
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HR++ N +
Sbjct: 290 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 349
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 350 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 410 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 142
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 143 VSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 201
Query: 166 YEM 168
E+
Sbjct: 202 TEI 204
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 20/167 (11%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK--KANGVHF--- 73
S + M++I + +N I+ + + G + +I+GY G++ E ++ + G+ +
Sbjct: 89 SEMEMMKMIGKHKN--IINLLGACTQDGP-LYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 74 ----PEEKLC-KWLV----QLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAK 124
PEE++ K LV QL + YL + +HRD+ N+ +T + +++ DFGLA+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 125 MLISDDLASSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ + D +M PE L D Y +SD+WS G ++E+
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 142 VSDTLSCKIADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 166 YEM 168
E+
Sbjct: 201 TEI 203
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 147
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 148 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 207
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 208 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 87 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 146
Query: 111 RDQDIRLGDFGLAKMLISDDL-ASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D A + P + PE LA + KSD+W+ G ++E+
Sbjct: 147 ENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 206
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 207 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 5/178 (2%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 147
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE 167
+ +++ DFGL++ L++ D ++ G + PE LA + KSD+W+ G ++E
Sbjct: 148 ENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 206
Query: 168 MSAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
++ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 207 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 99 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 158
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 159 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 218
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 219 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 9/219 (4%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P +V + + V +G V I+I + E G + ++K +G
Sbjct: 84 TEKQRRDFLCEASIMGQFDHPNVV-HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG-Q 141
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA 132
F +L L + + YL +HRD+ NI + + ++ DFGL++ +I DD
Sbjct: 142 FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSR-VIEDDPE 200
Query: 133 SSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINK 186
+ T + PE + + S SD+WS G ++E MS + + Q +I
Sbjct: 201 AVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 260
Query: 187 INKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
I + P P L+ +K RP +++
Sbjct: 261 IEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIV 299
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK---------KAN 69
S + M++I + +N I+ + + G + +I+ Y G++ E ++ N
Sbjct: 123 SEMEMMKMIGKHKN--IINLLGACTQDGP-LYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 70 GVHFPEEKLC-KWLV----QLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAK 124
H PEE+L K LV Q+ + YL + +HRD+ N+ +T D +++ DFGLA+
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 125 MLISDDLASSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ D +M PE L D Y +SD+WS G ++E+
Sbjct: 240 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 151 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 211 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 270
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 271 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 327
Query: 249 FPLEWSDSNFKK 260
P +DSNF +
Sbjct: 328 LPSP-TDSNFYR 338
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 237 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 293
Query: 249 FPLEWSDSNFKK 260
P +DSNF +
Sbjct: 294 LPSP-TDSNFYR 304
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 146 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 205
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D+ + + K P L+++ + NP RPS AE+
Sbjct: 206 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 239 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 295
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 296 LPSP-TDSNFYRA 307
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 142 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 201
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 202 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 261
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 262 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 318
Query: 249 FPLEWSDSNFKK 260
P +DSNF +
Sbjct: 319 LPSP-TDSNFYR 329
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 136
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 137 VSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 195
Query: 166 YEM 168
E+
Sbjct: 196 TEI 198
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK---------KANGVHFPEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ N H PEE+L K LV Q+ + YL +
Sbjct: 100 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 159
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T D +++ DFGLA+ + D +M PE L D Y
Sbjct: 160 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 219
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 220 HQSDVWSFGVLLWEI 234
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 118 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 237
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 238 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 294
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 295 LPSP-TDSNFYRA 306
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 142 VSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 166 YEM 168
E+
Sbjct: 201 TEI 203
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK---------KANGVHFPEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ N H PEE+L K LV Q+ + YL +
Sbjct: 104 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 163
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T D +++ DFGLA+ + D +M PE L D Y
Sbjct: 164 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 223
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 224 HQSDVWSFGVLLWEI 238
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 244 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 300
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 301 LPSP-TDSNFYRA 312
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK---------KAN 69
S + M++I + +N I+ + + G + +I+ Y G++ E ++ N
Sbjct: 82 SEMEMMKMIGKHKN--IINLLGACTQDGP-LYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 70 GVHFPEEKLC-KWLV----QLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAK 124
H PEE+L K LV Q+ + YL + +HRD+ N+ +T D +++ DFGLA+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 125 MLISDDLASSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ D +M PE L D Y +SD+WS G ++E+
Sbjct: 199 DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 121 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 180
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 240
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 241 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 297
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 298 LPSP-TDSNFYRA 309
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKA---------N 69
S + M++I + +N I+ + + G + +I+ Y G++ E ++ N
Sbjct: 82 SEMEMMKMIGKHKN--IINLLGACTQDGP-LYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 70 GVHFPEEKLC-KWLV----QLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAK 124
H PEE+L K LV Q+ + YL + +HRD+ N+ +T D +++ DFGLA+
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 125 MLISDDLASSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ D +M PE L D Y +SD+WS G ++E+
Sbjct: 199 DIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK---------KANGVHFPEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ N H PEE+L K LV Q+ + YL +
Sbjct: 103 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 162
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T D +++ DFGLA+ + D +M PE L D Y
Sbjct: 163 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 222
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 223 HQSDVWSFGVLLWEI 237
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 123 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 183 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 242
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 243 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 299
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 300 LPSP-TDSNFYRA 311
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK---------KANGVHFPEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ N H PEE+L K LV Q+ + YL +
Sbjct: 111 VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 170
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T D +++ DFGLA+ + D +M PE L D Y
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 231 HQSDVWSFGVLLWEI 245
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 244 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 300
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 301 LPSP-TDSNFYRA 312
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 237 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 293
Query: 249 FPLEWSDSNFKK 260
P +DSNF +
Sbjct: 294 LPSP-TDSNFYR 304
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 239 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 295
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 296 LPSP-TDSNFYRA 307
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 240 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 296
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 297 LPSP-TDSNFYRA 308
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 240 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 296
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 297 LPSP-TDSNFYRA 308
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 244 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 300
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 301 LPSP-TDSNFYRA 312
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 237 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 293
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 294 LPSP-TDSNFYRA 305
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 237 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 293
Query: 249 FPLEWSDSNFKK 260
P +DSNF +
Sbjct: 294 LPSP-TDSNFYR 304
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 240 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 296
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 297 LPSP-TDSNFYRA 308
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + Q +RL D+GLA+ + V +
Sbjct: 142 YMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 201
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M ++ F
Sbjct: 202 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 238
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 118 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 237
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 238 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 294
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 295 LPSP-TDSNFYRA 306
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + Q +RL D+GLA+ + V +
Sbjct: 137 YMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASR 196
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M ++ F
Sbjct: 197 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPF 233
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 135 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 194
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 195 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 254
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 255 LELMRMCWQYNPKMRPSFLEII 276
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 111 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 170
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 171 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 230
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 231 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 287
Query: 249 FPLEWSDSNFKK 260
P +DSNF +
Sbjct: 288 LPSP-TDSNFYR 298
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 88 ALNYLHAN---HILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD--LASSVVGTPSYM 142
L YLH + I+HRDVK +NI L + + +GDFGLAK++ D + +V GT ++
Sbjct: 151 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHI 210
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALIN 185
PE L+ K+D++ G + E+ + +AFD+ L N
Sbjct: 211 APEYLSTGKSSEKTDVFGYGVMLLELITGQ---RAFDLARLAN 250
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 137 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 256
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 257 FELMRMCWQYNPKMRPSFLEII 278
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 269
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 270 FELMRMCWQYNPKMRPSFLEII 291
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIKK---------ANGVHFPEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ N H PEE+L K LV Q+ + YL +
Sbjct: 96 VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 155
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T D +++ DFGLA+ + D +M PE L D Y
Sbjct: 156 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 215
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 216 HQSDVWSFGVLLWEI 230
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HRD++ +NI
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D ++ G + PE + + KSD+WS G +
Sbjct: 142 VSDTLSCKIADFGLAR-LIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200
Query: 166 YEM 168
E+
Sbjct: 201 TEI 203
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM 168
G +M E + Y +SD+WS G V+E+
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 46 GCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCS 105
G + ++ Y G + + +++ G P+ L W VQ+ + YL + ++HR++
Sbjct: 104 GSSLQLVTQYLPLGSLLDHVRQHRGALGPQ-LLLNWGVQIAKGMYYLEEHGMVHRNLAAR 162
Query: 106 NIFLTRDQDIRLGDFGLAKMLISDD--LASSVVGTP-SYMCPELLADIPYGSKSDIWSLG 162
N+ L +++ DFG+A +L DD L S TP +M E + Y +SD+WS G
Sbjct: 163 NVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYG 222
Query: 163 CCVYEM 168
V+E+
Sbjct: 223 VTVWEL 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 144 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 263
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 264 FELMRMCWQYNPKMRPSFLEII 285
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 210 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 269
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 270 FELMRMCWQYNPKMRPSFLEII 291
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 141 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 201 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 260
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 261 FELMRMCWQYNPKMRPSFLEII 282
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ +LL AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 151 YIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASR 210
Query: 140 SYMCPELLADI-PYGSKSDIWSLGCCVYEMSAQKA-AFKAFDMQALINKINKSIVAPLPT 197
+ PELL D+ Y D+WSLGC M +K F D + KI K +
Sbjct: 211 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLN 270
Query: 198 VYSGAFR 204
Y +R
Sbjct: 271 AYLNKYR 277
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 3/177 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 143
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 144 ENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 203
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+ + + D + + K P L+++ + NP RPS AE+
Sbjct: 204 ATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 143 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 262
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 263 FELMRMCWQYNPKMRPSFLEII 284
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 23/115 (20%)
Query: 84 QLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS--------------- 128
QL+ + YLH+ +LHRD+K SNI L + +++ DFGL++ ++
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINEN 176
Query: 129 ----DD---LASSVVGTPSYMCPE-LLADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
DD + + V T Y PE LL Y D+WSLGC + E+ K F
Sbjct: 177 TENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFGLAK+L +++
Sbjct: 114 QYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 173
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 174 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 233
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 234 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 290
Query: 249 FPLEWSDSNFKK 260
P +DSNF +
Sbjct: 291 LPSP-TDSNFYR 301
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 143 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 203 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 262
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 263 FELMRMCWQYNPKMRPSFLEII 284
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 144 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSP 203
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 204 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 263
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 264 FELMRMCWQYNPKMRPSFLEII 285
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 172 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 232 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 291
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 292 FELMRMCWQYNPKMRPSFLEII 313
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 140 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 200 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 259
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 260 FELMRMCWQYNPKMRPSFLEII 281
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+AN +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 137 GMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSA-QKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E++ + ++ + ++ + + + P
Sbjct: 197 ESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDML 256
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RPS E++
Sbjct: 257 LELMRMCWQYNPKMRPSFLEII 278
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIKK---------ANGVHFPEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ N H PEE+L K LV Q+ + YL +
Sbjct: 111 VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK 170
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T D +++ DFGLA+ + D +M PE L D Y
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT 230
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 231 HQSDVWSFGVLLWEI 245
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T+R RR E ++ + +P I+ + V V I+ + E G + ++ +G
Sbjct: 57 TERQRREFLSEASIMGQFEHPNIIRLEGV-VTNSMPVMILTEFMENGALDSFLRLNDG-Q 114
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML---ISD 129
F +L L + + YL +HRD+ NI + + ++ DFGL++ L SD
Sbjct: 115 FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 130 DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALIN 185
+S +G + PE +A + S SD WS G ++E MS + + Q +IN
Sbjct: 175 PTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN 234
Query: 186 KINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRP 219
I + P P + L+ +K+ RP
Sbjct: 235 AIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARP 268
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 46 GCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCS 105
G + ++ Y G + + +++ G P+ L W VQ+ + YL + ++HR++
Sbjct: 86 GSSLQLVTQYLPLGSLLDHVRQHRGALGPQ-LLLNWGVQIAKGMYYLEEHGMVHRNLAAR 144
Query: 106 NIFLTRDQDIRLGDFGLAKMLISDD--LASSVVGTP-SYMCPELLADIPYGSKSDIWSLG 162
N+ L +++ DFG+A +L DD L S TP +M E + Y +SD+WS G
Sbjct: 145 NVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYG 204
Query: 163 CCVYEM 168
V+E+
Sbjct: 205 VTVWEL 210
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 23 EMELISRVRNPFIVEY-----KDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
E ++ ++ NP+IV +SW+ +++ E G + + +++ H ++
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 470
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASS 134
+ + + Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 471 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530
Query: 135 VVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
P + PE + + SKSD+WS G ++E
Sbjct: 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 564
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 5/190 (2%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFG AK+L +++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKINKSI 191
G +M E + Y +SD+WS G V+E M+ + + + + K
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
Query: 192 VAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPL 251
P P + + +++ + + RP EL+ +L + G R P
Sbjct: 239 RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPS 298
Query: 252 EWSDSNFKKT 261
+DSNF +
Sbjct: 299 P-TDSNFYRA 307
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 23 EMELISRVRNPFIVEY-----KDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
E ++ ++ NP+IV +SW+ +++ E G + + +++ H ++
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 471
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASS 134
+ + + Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 472 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 531
Query: 135 VVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
P + PE + + SKSD+WS G ++E
Sbjct: 532 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 565
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
II + G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 84 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 143
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE 167
+ +++ DFGL++ L++ D ++ G + PE LA + KSD+W+ G ++E
Sbjct: 144 ENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 202
Query: 168 MSAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
++ + + D + + K P L+++ + NP RPS AE+
Sbjct: 203 IATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 3/176 (1%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
I+ Y G++ + +++ N L Q+ A+ YL + +HRD+ N +
Sbjct: 105 IVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 164
Query: 111 RDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ +++ DFGL++++ D + + PE LA + KSD+W+ G ++E+
Sbjct: 165 ENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI 224
Query: 169 SAQKAA-FKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAE 223
+ + + D+ + + + K P L+++ + +P RPS AE
Sbjct: 225 ATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +K +G+ KL Q+ + ++ + +HR+++ +NI
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANIL 137
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ LI D+ ++ G + PE + + KSD+WS G +
Sbjct: 138 VSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 196
Query: 166 YEM 168
E+
Sbjct: 197 TEI 199
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK--KANGVHF-------PEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ + G+ + PEE++ K LV QL + YL +
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T + +R+ DFGLA+ + + D +M PE L D Y
Sbjct: 178 CIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 5/190 (2%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFG AK+L +++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKINKSI 191
G +M E + Y +SD+WS G V+E M+ + + + + K
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
Query: 192 VAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPL 251
P P + + +++ + + RP EL+ +L + G R P
Sbjct: 239 RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPS 298
Query: 252 EWSDSNFKKT 261
+DSNF +
Sbjct: 299 P-TDSNFYRA 307
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ E G + ++K +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEXMENGSLDSFLRKHDA-Q 143
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T+R RR E ++ + +P I+ + V V I+ + E G + ++ +G
Sbjct: 55 TERQRREFLSEASIMGQFEHPNIIRLEGV-VTNSMPVMILTEFMENGALDSFLRLNDG-Q 112
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML---ISD 129
F +L L + + YL +HRD+ NI + + ++ DFGL++ L SD
Sbjct: 113 FTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 172
Query: 130 DLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALIN 185
+S +G + PE +A + S SD WS G ++E MS + + Q +IN
Sbjct: 173 PTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVIN 232
Query: 186 KINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRP 219
I + P P + L+ +K+ RP
Sbjct: 233 AIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARP 266
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ E G + ++K +
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEXMENGSLDSFLRKHDA-Q 143
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 144 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 203
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 264 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK--KANGVHF--- 73
S + M++I + +N I+ + + G + +I+ Y G++ E ++ + G+ +
Sbjct: 135 SEMEMMKMIGKHKN--IINLLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 74 ----PEEKLC-KWLV----QLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAK 124
PEE++ K LV QL + YL + +HRD+ N+ +T + +++ DFGLA+
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
Query: 125 MLISDDLASSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ + D +M PE L D Y +SD+WS G ++E+
Sbjct: 252 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 141 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 200
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 201 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 237
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANG--VH------- 72
+E +++ ++ NP+IV +IG C+ + ++ A G +H
Sbjct: 59 REAQIMHQLDNPYIVR--------------LIGVCQAEALMLVMEMAGGGPLHKFLVGKR 104
Query: 73 --FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD 130
P + + L Q+ M + YL + +HRD+ N+ L ++ DFGL+K L +DD
Sbjct: 105 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164
Query: 131 ---LASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
A S P + PE + + S+SD+WS G ++E
Sbjct: 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 205
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGV------------HFPEEKLCKWLVQLLMALNYLHANH 96
V +I YC GD+ +++ + V L + Q+ + +L + +
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN 184
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD--LASSVVGTP-SYMCPELLADIPYG 153
+HRDV N+ LT ++GDFGLA+ +++D + P +M PE + D Y
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 244
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 245 VQSDVWSYGILLWEI 259
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 134 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 193
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 194 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 230
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 81 WLVQLLMALNYLHANHILHRDVKCSNIFLTRD-QDIRLGDFGLAKMLISDDLASSVVGTP 139
++ ++L AL+Y H+ I+HRDVK N+ + + + +RL D+GLA+ + V +
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 140 SYMCPELLADIP-YGSKSDIWSLGCCVYEMSAQKAAF 175
+ PELL D Y D+WSLGC + M +K F
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 20/167 (11%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK--KANGVHF--- 73
S + M++I + +N I+ + + G + +I+ Y G++ E ++ + G+ +
Sbjct: 89 SEMEMMKMIGKHKN--IINLLGACTQDGP-LYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 74 ----PEEKLC-KWLV----QLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAK 124
PEE++ K LV QL + YL + +HRD+ N+ +T + +++ DFGLA+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 125 MLISDDLASSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ + D +M PE L D Y +SD+WS G ++E+
Sbjct: 206 DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 93/203 (45%), Gaps = 7/203 (3%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKW 81
+E +++ ++++ +V+ E+ Y I+ Y G + + +K G L
Sbjct: 53 EEAQIMKKLKHDKLVQLYAVVSEEPIY--IVTEYMNKGSLLDFLKDGEGRALKLPNLVDM 110
Query: 82 LVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP-- 139
Q+ + Y+ + +HRD++ +NI + ++ DFGLA+ LI D+ ++ G
Sbjct: 111 AAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLAR-LIEDNEXTARQGAKFP 169
Query: 140 -SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQ-KAAFKAFDMQALINKINKSIVAPLPT 197
+ PE + KSD+WS G + E+ + + + + + ++ ++ + P P
Sbjct: 170 IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQ 229
Query: 198 VYSGAFRGLVKSMLRKNPEFRPS 220
+ L+ +K+PE RP+
Sbjct: 230 DCPISLHELMIHCWKKDPEERPT 252
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
G E + K +G L + Q+ + +L + + +HRDV N+ LT ++G
Sbjct: 141 GQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 200
Query: 119 DFGLAKMLISDD--LASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEM 168
DFGLA+ +++D + P +M PE + D Y +SD+WS G ++E+
Sbjct: 201 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 11/192 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFG AK+L +++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 176
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 237 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 293
Query: 249 FPLEWSDSNFKK 260
P +DSNF +
Sbjct: 294 LPSP-TDSNFYR 304
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 20/167 (11%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK--KANGVHF--- 73
S + M++I + +N I+ + + G + +I+ Y G++ E ++ + G+ +
Sbjct: 89 SEMEMMKMIGKHKN--IINLLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 74 ----PEEKLC-KWLV----QLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAK 124
PEE++ K LV QL + YL + +HRD+ N+ +T + +++ DFGLA+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 125 MLISDDLASSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ + D + +M PE L D Y +SD+WS G ++E+
Sbjct: 206 DINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFG AK+L +++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 183
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 244 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 300
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 301 LPSP-TDSNFYRA 312
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFG AK+L +++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 239 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 295
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 296 LPSP-TDSNFYRA 307
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 29/161 (18%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANG--VH------- 72
+E +++ ++ NP+IV +IG C+ + ++ A G +H
Sbjct: 385 REAQIMHQLDNPYIVR--------------LIGVCQAEALMLVMEMAGGGPLHKFLVGKR 430
Query: 73 --FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD 130
P + + L Q+ M + YL + +HR++ N+ L ++ DFGL+K L +DD
Sbjct: 431 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490
Query: 131 ---LASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
A S P + PE + + S+SD+WS G ++E
Sbjct: 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 531
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Query: 13 TDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVH 72
T++ RR E ++ + +P I+ + V K V I+ E G + ++K +
Sbjct: 57 TEKQRRDFLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEXMENGSLDSFLRKHDA-Q 114
Query: 73 FPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD-DL 131
F +L L + + YL +HRD+ NI + + ++ DFGL+++L D +
Sbjct: 115 FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA 174
Query: 132 ASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKI 187
A + G + PE +A + S SD+WS G ++E MS + + Q +I +
Sbjct: 175 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
Query: 188 NKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
++ P P A L+ +K+ RP +++
Sbjct: 235 DEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK--KANGVHF-------PEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ + G+ + PEE++ K LV QL + YL +
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T + +++ DFGLA+ + + D +M PE L D Y
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 15/135 (11%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPE------------EKLCKWLVQLLMALNYLHANH 96
V +I YC GD+ +++ + V + L + Q+ + +L + +
Sbjct: 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN 184
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD--LASSVVGTP-SYMCPELLADIPYG 153
+HRDV N+ LT ++GDFGLA+ +++D + P +M PE + D Y
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 244
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 245 VQSDVWSYGILLWEI 259
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 11/193 (5%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W VQ+ +NYL ++HRD+ N+ + Q +++ DFG AK+L +++
Sbjct: 121 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 180
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM----SAQKAAFKAFDMQALINKIN 188
G +M E + Y +SD+WS G V+E+ S A ++ +++ K
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 240
Query: 189 KSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNT 248
+ P+ T+ + +VK + + + RP EL+ +L + G R
Sbjct: 241 RLPQPPICTI--DVYMIMVKCWM-IDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMH 297
Query: 249 FPLEWSDSNFKKT 261
P +DSNF +
Sbjct: 298 LPSP-TDSNFYRA 309
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 35/177 (19%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGC------YVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+E+ +++R+++ +I+ D + Y+ + I D+ + K + E
Sbjct: 74 REITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA---DSDLKKLFKTP--IFLTE 128
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKML-------IS 128
E + L LL+ N++H + I+HRD+K +N L +D +++ DFGLA+ + I
Sbjct: 129 EHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV 188
Query: 129 DDLA----------------SSVVGTPSYMCPEL-LADIPYGSKSDIWSLGCCVYEM 168
+DL +S V T Y PEL L Y DIWS GC E+
Sbjct: 189 NDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 88 ALNYLHAN---HILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD--LASSVVGTPSYM 142
L YLH + I+HRDVK +NI L + + +GDFGLAK++ D + +V G ++
Sbjct: 143 GLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHI 202
Query: 143 CPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALIN 185
PE L+ K+D++ G + E+ + +AFD+ L N
Sbjct: 203 APEYLSTGKSSEKTDVFGYGVMLLELITGQ---RAFDLARLAN 242
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK--KANGVHF-------PEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ + G+ + PEE++ K LV QL + YL +
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T + +++ DFGLA+ + + D +M PE L D Y
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 11/208 (5%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKD-SWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPE 75
R +E R++ P +V D ++ YV + G D+A +++ + P
Sbjct: 78 RTRXQREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRL--INGVDLAAXLRRQGPLAPP- 134
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLA--S 133
+ + Q+ AL+ HA HRDVK NI ++ D L DFG+A + L
Sbjct: 135 -RAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLG 193
Query: 134 SVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVA 193
+ VGT Y PE ++ ++DI++L C +YE ++ + IN++I
Sbjct: 194 NTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPR 253
Query: 194 PLPTVYSG---AFRGLVKSMLRKNPEFR 218
P TV G AF ++ KNPE R
Sbjct: 254 P-STVRPGIPVAFDAVIARGXAKNPEDR 280
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK--KANGVHF-------PEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ + G+ + PEE++ K LV QL + YL +
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T + +++ DFGLA+ + + D +M PE L D Y
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK--KANGVHF-------PEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ + G+ + PEE++ K LV QL + YL +
Sbjct: 118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 177
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T + +++ DFGLA+ + + D +M PE L D Y
Sbjct: 178 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 237
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 238 HQSDVWSFGVLMWEI 252
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y G + +++ F ++L + + A+ YL + LHRD+ N
Sbjct: 78 IFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 136
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
+ +++ DFGL++ ++ D+ SS VG+ + PE+L + SKSDIW+ G +
Sbjct: 137 VNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 195
Query: 166 YEM-SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+E+ S K ++ F I + + P + S ++ S + + RP+ L
Sbjct: 196 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 255
Query: 225 L 225
L
Sbjct: 256 L 256
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y G + +++ F ++L + + A+ YL + LHRD+ N
Sbjct: 74 IFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 132
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
+ +++ DFGL++ ++ D+ SS VG+ + PE+L + SKSDIW+ G +
Sbjct: 133 VNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 191
Query: 166 YEM-SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+E+ S K ++ F I + + P + S ++ S + + RP+ L
Sbjct: 192 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251
Query: 225 L 225
L
Sbjct: 252 L 252
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 4/180 (2%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y G + +++ F ++L + + A+ YL + LHRD+ N
Sbjct: 94 IFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 152
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGT--PSYMCPELLADIPYGSKSDIWSLGCCVY 166
+ +++ DFGL++ ++ D+ SSV + PE+L + SKSDIW+ G ++
Sbjct: 153 VNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMW 212
Query: 167 EM-SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
E+ S K ++ F I + + P + S ++ S + + RP+ LL
Sbjct: 213 EIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 272
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK--KANGVHF-------PEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ + G+ + PEE++ K LV QL + YL +
Sbjct: 105 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 164
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T + +++ DFGLA+ + + D +M PE L D Y
Sbjct: 165 CIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 224
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 225 HQSDVWSFGVLMWEI 239
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK--KANGVHF-------PEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ + G+ + PEE++ K LV QL + YL +
Sbjct: 107 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 166
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T + +++ DFGLA+ + + D +M PE L D Y
Sbjct: 167 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 226
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 227 HQSDVWSFGVLMWEI 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 17/135 (12%)
Query: 51 IIIGYCEGGDMAEAIK--KANGVHF-------PEEKLC-KWLV----QLLMALNYLHANH 96
+I+ Y G++ E ++ + G+ + PEE++ K LV QL + YL +
Sbjct: 110 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK 169
Query: 97 ILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGT---PSYMCPELLADIPYG 153
+HRD+ N+ +T + +++ DFGLA+ + + D +M PE L D Y
Sbjct: 170 CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT 229
Query: 154 SKSDIWSLGCCVYEM 168
+SD+WS G ++E+
Sbjct: 230 HQSDVWSFGVLMWEI 244
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y G + +++ F ++L + + A+ YL + LHRD+ N
Sbjct: 79 IFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 137
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
+ +++ DFGL++ ++ D+ SS VG+ + PE+L + SKSDIW+ G +
Sbjct: 138 VNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 196
Query: 166 YEM-SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+E+ S K ++ F I + + P + S ++ S + + RP+ L
Sbjct: 197 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 256
Query: 225 L 225
L
Sbjct: 257 L 257
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y G + +++ F ++L + + A+ YL + LHRD+ N
Sbjct: 85 IFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 143
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
+ +++ DFGL++ ++ D+ SS VG+ + PE+L + SKSDIW+ G +
Sbjct: 144 VNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 202
Query: 166 YEM-SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+E+ S K ++ F I + + P + S ++ S + + RP+ L
Sbjct: 203 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 262
Query: 225 L 225
L
Sbjct: 263 L 263
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 5/155 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLIS--DDLAS 133
E L + Q+ + +L + +HRD+ NI L+ + +++ DFGLA+ + D +
Sbjct: 199 EDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 134 SVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDM-QALINKINKS 190
P +M PE + D Y +KSD+WS G ++E+ S + + M + +++ +
Sbjct: 259 GDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREG 318
Query: 191 IVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
+ P + ++ ++P+ RP AEL+
Sbjct: 319 MRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELV 353
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
G + + ++K G HF L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 99 GSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 119 DFGLAKMLISDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFGL + L +D + P C PE L + SD W G ++EM + +
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 217
Query: 174 AFKAFDMQALINKINK 189
+ + +++KI+K
Sbjct: 218 PWIGLNGSQILHKIDK 233
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
G + + ++K G HF L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 105 GSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 119 DFGLAKMLISDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFGL + L +D + P C PE L + SD W G ++EM + +
Sbjct: 164 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 223
Query: 174 AFKAFDMQALINKINK 189
+ + +++KI+K
Sbjct: 224 PWIGLNGSQILHKIDK 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
G + + ++K G HF L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 105 GSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 163
Query: 119 DFGLAKMLISDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFGL + L +D + P C PE L + SD W G ++EM + +
Sbjct: 164 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 223
Query: 174 AFKAFDMQALINKINK 189
+ + +++KI+K
Sbjct: 224 PWIGLNGSQILHKIDK 239
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y G + +++ F ++L + + A+ YL + LHRD+ N
Sbjct: 94 IFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 152
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
+ +++ DFGL++ ++ D+ SS VG+ + PE+L + SKSDIW+ G +
Sbjct: 153 VNDQGVVKVSDFGLSRYVLDDEETSS-VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLM 211
Query: 166 YEM-SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAEL 224
+E+ S K ++ F I + + P + S ++ S + + RP+ L
Sbjct: 212 WEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 271
Query: 225 L 225
L
Sbjct: 272 L 272
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 6/182 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y E G + + +++ +G F +L L + + YL + +HRD+ NI
Sbjct: 121 MMIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNIL 179
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTPS----YMCPELLADIPYGSKSDIWSLGCC 164
+ + ++ DFGL+++L D A+ + PE ++ + S SD+WS G
Sbjct: 180 VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIV 239
Query: 165 VYE-MSAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAE 223
++E M+ + + ++ IN P P A L+ ++ RP A+
Sbjct: 240 MWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFAD 299
Query: 224 LL 225
++
Sbjct: 300 IV 301
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
G + + ++K G HF L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 95 GSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 119 DFGLAKMLISDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFGL + L +D + P C PE L + SD W G ++EM + +
Sbjct: 154 DFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 213
Query: 174 AFKAFDMQALINKINK 189
+ + +++KI+K
Sbjct: 214 PWIGLNGSQILHKIDK 229
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
G + + ++K G HF L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 95 GSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 119 DFGLAKMLISDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFGL + L +D + P C PE L + SD W G ++EM + +
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 213
Query: 174 AFKAFDMQALINKINK 189
+ + +++KI+K
Sbjct: 214 PWIGLNGSQILHKIDK 229
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
G + + ++K G HF L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 99 GSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 157
Query: 119 DFGLAKMLISDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFGL + L +D + P C PE L + SD W G ++EM + +
Sbjct: 158 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 217
Query: 174 AFKAFDMQALINKINK 189
+ + +++KI+K
Sbjct: 218 PWIGLNGSQILHKIDK 233
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 23 EMELISRVRNPFIVEY-----KDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
E ++ ++ NP+IV +SW+ +++ E G + + +++ H ++
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 126
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASS 134
+ + + Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 127 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 186
Query: 135 VVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
P + PE + + SKSD+WS G ++E
Sbjct: 187 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 19 SAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIK--KANGVH---- 72
S + M++I + +N I+ + + G + +I+ Y G++ E ++ + G+
Sbjct: 89 SEMEMMKMIGKHKN--IINLLGACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 73 ---FPEEKLC-KWLV----QLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAK 124
PEE++ K LV QL + YL + +HRD+ N+ +T + +++ DFGLA+
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
Query: 125 MLISDDLASSVVGT---PSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+ + D +M PE L D Y +SD+WS G ++E+
Sbjct: 206 DINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 59 GDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
G + + ++K G HF L ++ VQ+ + YL + +HRD+ N+ L +++G
Sbjct: 95 GSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG 153
Query: 119 DFGLAKMLISDD---LASSVVGTPSYMC-PELLADIPYGSKSDIWSLGCCVYEM-SAQKA 173
DFGL + L +D + P C PE L + SD W G ++EM + +
Sbjct: 154 DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQE 213
Query: 174 AFKAFDMQALINKINK 189
+ + +++KI+K
Sbjct: 214 PWIGLNGSQILHKIDK 229
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 23 EMELISRVRNPFIVEY-----KDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
E ++ ++ NP+IV +SW+ +++ E G + + +++ H ++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 128
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASS 134
+ + + Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 135 VVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
P + PE + + SKSD+WS G ++E
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 23 EMELISRVRNPFIVEY-----KDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
E ++ ++ NP+IV +SW+ +++ E G + + +++ H ++
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 128
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASS 134
+ + + Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 188
Query: 135 VVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
P + PE + + SKSD+WS G ++E
Sbjct: 189 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 84 QLLMALNYLHANHILHRDVKCSNIFL-TRDQDIRLGDFGLAKMLISDDLASSVVGTPSYM 142
Q++ A+ + H+ ++HRD+K NI + R +L DFG + L+ D+ + GT Y
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG-SGALLHDEPYTDFDGTRVYS 205
Query: 143 CPELLADIPYGS-KSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
PE ++ Y + + +WSLG +Y+M F+ D + L +++ P S
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER-DQEILEAELH------FPAHVSP 258
Query: 202 AFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVLGIHLKLNGPRRNTFPLEWS 254
L++ L P RPS E+L P +Q + LN + PL WS
Sbjct: 259 DCCALIRRCLAPKPSSRPSLEEILLDPWMQ--TPAEDVPLNPSKGGPAPLAWS 309
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 46 GCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCK----------WLVQLLMALNYLHAN 95
G + +I+ +C+ G+++ ++ P + L K + Q+ + +L +
Sbjct: 104 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR 163
Query: 96 HILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD--LASSVVGTP-SYMCPELLADIPY 152
+HRD+ NI L+ +++ DFGLA+ + D + P +M PE + D Y
Sbjct: 164 KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 223
Query: 153 GSKSDIWSLGCCVYEMSAQKAA 174
+SD+WS G ++E+ + A+
Sbjct: 224 TIQSDVWSFGVLLWEIFSLGAS 245
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y G + +++ F ++L + + A+ YL + LHRD+ N
Sbjct: 79 IFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL 137
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASS------VVGTPSYMCPELLADIPYGSKSDIWSLG 162
+ +++ DFGL++ ++ D+ SS V +P PE+L + SKSDIW+ G
Sbjct: 138 VNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSP----PEVLMYSKFSSKSDIWAFG 193
Query: 163 CCVYEM-SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSA 221
++E+ S K ++ F I + + P + S ++ S + + RP+
Sbjct: 194 VLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTF 253
Query: 222 AELL 225
LL
Sbjct: 254 KILL 257
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 81 WLVQLLMALNYLH--ANHILHRDVKCSNIFLTR-DQDIRLGDFGLAKMLISDDLASSVVG 137
+L QL+ ++ LH + ++ HRD+K N+ + D ++L DFG AK L + + +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC 193
Query: 138 TPSYMCPELL-ADIPYGSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLP 196
+ Y PEL+ + Y + DIWS+GC EM + F+ + +++I + + P
Sbjct: 194 SRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253
Query: 197 TV--------------------YSGAFR-----------GLVKSMLRKNPEFRPSAAELL 225
V +S F L+ ++L+ PE R E L
Sbjct: 254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEAL 313
Query: 226 CHPHL 230
CHP+
Sbjct: 314 CHPYF 318
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 51 IIIGYCEGGDMAEAIKKA----NGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSN 106
+I+ + + GD+ + + N + P + L +++V + + YL + + +HRD+ N
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARN 167
Query: 107 IFLTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGC 163
L D + + DFGL++ + S D + ++ E LAD Y SD+W+ G
Sbjct: 168 CMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGV 227
Query: 164 CVYEM 168
++E+
Sbjct: 228 TMWEI 232
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 23 EMELISRVRNPFIVEY-----KDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
E ++ ++ NP+IV +SW+ +++ E G + + +++ H ++
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 118
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASS 134
+ + + Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 119 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 178
Query: 135 VVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
P + PE + + SKSD+WS G ++E
Sbjct: 179 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 23 EMELISRVRNPFIVEY-----KDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
E ++ ++ NP+IV +SW+ +++ E G + + +++ H ++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 112
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASS 134
+ + + Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT 172
Query: 135 VVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
P + PE + + SKSD+WS G ++E
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 23 EMELISRVRNPFIVEY-----KDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
E ++ ++ NP+IV +SW+ +++ E G + + +++ H ++
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 112
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASS 134
+ + + Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 172
Query: 135 VVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
P + PE + + SKSD+WS G ++E
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 23 EMELISRVRNPFIVEY-----KDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
E ++ ++ NP+IV +SW+ +++ E G + + +++ H ++
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 106
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASS 134
+ + + Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 107 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 166
Query: 135 VVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
P + PE + + SKSD+WS G ++E
Sbjct: 167 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 23 EMELISRVRNPFIVEY-----KDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEK 77
E ++ ++ NP+IV +SW+ +++ E G + + +++ H ++
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESWM-------LVMEMAELGPLNKYLQQNR--HVKDKN 108
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDD---LASS 134
+ + + Q+ M + YL ++ +HRD+ N+ L ++ DFGL+K L +D+ A +
Sbjct: 109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168
Query: 135 VVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYE 167
P + PE + + SKSD+WS G ++E
Sbjct: 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVG 137
L W VQ+ + YL ++HRD+ N+ + +++ DFGLA++L D+ + G
Sbjct: 142 LLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 201
Query: 138 TP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKINKSIVA 193
+M E + + +SD+WS G ++E M+ + + + + + K
Sbjct: 202 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL 261
Query: 194 PLPTVYS-GAFRGLVKSML---RKNPEFRPSAAEL 224
P P + + + +VK + P+F+ AAE
Sbjct: 262 PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEF 296
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II + G + + +K G P KL + Q+ + ++ + +HRD++ +NI
Sbjct: 257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 316
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ +I D+ ++ G + PE + + KSD+WS G +
Sbjct: 317 VSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 375
Query: 166 YEM-SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPS 220
E+ + + + +I + + P P ++ + PE RP+
Sbjct: 376 MEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 431
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---A 132
+++ + ++ + YL+A +HRD+ N + D +++GDFG+ + + D
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 133 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINKINKSI 191
+ +M PE L D + + SD+WS G ++E+ S + ++ + ++ +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 249
Query: 192 VAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
P L++ + NP+ RP+ E++
Sbjct: 250 YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---A 132
+++ + ++ + YL+A +HRD+ N + D +++GDFG+ + + D
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 133 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINKINKSI 191
+ +M PE L D + + SD+WS G ++E+ S + ++ + ++ +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 249
Query: 192 VAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
P L++ + NP+ RP+ E++
Sbjct: 250 YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 78/176 (44%), Gaps = 5/176 (2%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II + G + + +K G P KL + Q+ + ++ + +HRD++ +NI
Sbjct: 84 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANIL 143
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ +I D+ ++ G + PE + + KSD+WS G +
Sbjct: 144 VSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 202
Query: 166 YEM-SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPS 220
E+ + + + +I + + P P ++ + PE RP+
Sbjct: 203 MEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 258
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---A 132
+++ + ++ + YL+A +HRD+ N + D +++GDFG+ + + D
Sbjct: 129 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 133 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINKINKSI 191
+ +M PE L D + + SD+WS G ++E+ S + ++ + ++ +
Sbjct: 189 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 248
Query: 192 VAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
P L++ + NP+ RP+ E++
Sbjct: 249 YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+A +HRD+ N + D +++GDFG+ + + D + +M P
Sbjct: 139 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 145 ELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E+ S + ++ + ++ + P
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV 258
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RP+ E++
Sbjct: 259 TDLMRMCWQFNPKMRPTFLEIV 280
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 172
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 227
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 228 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 113 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 171
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 226
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 227 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 267
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 78 LCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVG 137
L W VQ+ + YL ++HRD+ N+ + +++ DFGLA++L D+ + G
Sbjct: 119 LLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 178
Query: 138 TP---SYMCPELLADIPYGSKSDIWSLGCCVYE-MSAQKAAFKAFDMQALINKINKSIVA 193
+M E + + +SD+WS G ++E M+ + + + + + K
Sbjct: 179 GKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL 238
Query: 194 PLPTVYS-GAFRGLVKSML---RKNPEFRPSAAEL 224
P P + + + +VK + P+F+ AAE
Sbjct: 239 PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEF 273
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 113 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 171
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 226
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 227 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 267
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 109 EELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 167
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 222
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 223 --FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 263
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---A 132
+++ + ++ + YL+A +HRD+ N + D +++GDFG+ + + D
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG 189
Query: 133 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINKINKSI 191
+ +M PE L D + + SD+WS G ++E+ S + ++ + ++ +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 249
Query: 192 VAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
P L++ + NP RP+ E++
Sbjct: 250 YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 112 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 170
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 225
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 226 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 266
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 172
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 227
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 228 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 187
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 242
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 243 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 283
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 148 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 206
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 207 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 261
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 262 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 302
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 172
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 227
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 228 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 268
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 13 TDRARRSAHQEMELISRVRNPF-IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
T R+ E++++ + + +V + + G + +I+ +C+ G+++ ++
Sbjct: 72 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 131
Query: 72 HFPE------------EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGD 119
P E L + Q+ + +L + +HRD+ NI L+ +++ D
Sbjct: 132 FVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICD 191
Query: 120 FGLAKMLIS--DDLASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA 174
FGLA+ + D + P +M PE + D Y +SD+WS G ++E+ + A+
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 186
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 241
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 242 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 282
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKM---LISDDLASSVVGTPSYMCP 144
L+YLH I+HRDVK NI L + ++ DFG++K L L V GT Y+ P
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDP 210
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
E KSD++S G ++E+ ++A
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 214
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 269
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 270 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 310
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 49 VCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIF 108
+ II Y G + + +K G KL + Q+ + Y+ + +HRD++ +N+
Sbjct: 83 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVL 142
Query: 109 LTRDQDIRLGDFGLAKMLISDDLASSVVGTP---SYMCPELLADIPYGSKSDIWSLGCCV 165
++ ++ DFGLA+ +I D+ ++ G + PE + + KSD+WS G +
Sbjct: 143 VSESLMCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILL 201
Query: 166 YEM 168
YE+
Sbjct: 202 YEI 204
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 109 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 167
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 222
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 223 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 263
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 214
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 269
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 270 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKM---LISDDLASSVVGTPSYMCP 144
L+YLH I+HRDVK NI L + ++ DFG++K L L V GT Y+ P
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDP 210
Query: 145 ELLADIPYGSKSDIWSLGCCVYEMSAQKAAF 175
E KSD++S G ++E+ ++A
Sbjct: 211 EYFIKGRLTEKSDVYSFGVVLFEVLCARSAI 241
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 199
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 254
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 255 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 200
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIGGQVF---- 255
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 256 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 109 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 167
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIGGQVF---- 222
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 223 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 263
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 128 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 186
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 187 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 241
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 242 --FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 282
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 199
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIGGQVF---- 254
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 255 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 187
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 242
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 243 --FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 283
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 129 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 187
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 188 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 242
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 243 --FRQRVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQDVLL 283
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 200
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIGGQVF---- 255
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 256 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 13 TDRARRSAHQEMELISRVRNPF-IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
T R+ E++++ + + +V + + G + +I+ +C+ G+++ ++
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 72 HFPEEKLCK----------WLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFG 121
P + L K + Q+ + +L + +HRD+ NI L+ +++ DFG
Sbjct: 130 FVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFG 189
Query: 122 LAKMLISDD--LASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA 174
LA+ + D + P +M PE + D Y +SD+WS G ++E+ + A+
Sbjct: 190 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 245
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 199
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIGGQVF---- 254
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 255 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 136 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 194
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 195 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 249
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 250 --FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 290
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 108/262 (41%), Gaps = 29/262 (11%)
Query: 1 MYVLKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWV-EKGCY--VCIIIGYCE 57
Y LK+I Q DR A +E ++ +P I+ + E+G +++ + +
Sbjct: 56 FYALKRILCHEQQDR--EEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFK 113
Query: 58 GGDMAEAIK--KANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDI 115
G + I+ K G E+++ L+ + L +HA HRD+K +NI L +
Sbjct: 114 RGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQP 173
Query: 116 RLGDFGLA-----------KMLISDDLASSVVGTPSYMCPELL---ADIPYGSKSDIWSL 161
L D G + L D A+ T SY PEL + ++D+WSL
Sbjct: 174 VLMDLGSMNQACIHVEGSRQALTLQDWAAQRC-TISYRAPELFSVQSHCVIDERTDVWSL 232
Query: 162 GCCVYEMSAQKA----AFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEF 217
GC +Y M + F+ D AL + + P +S A L+ SM+ +P
Sbjct: 233 GCVLYAMMFGEGPYDMVFQKGDSVAL--AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQ 290
Query: 218 RPSAAELLCHPH-LQPYVLGIH 238
RP LL LQP G H
Sbjct: 291 RPHIPLLLSQLEALQPPAPGQH 312
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 161 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 219
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 220 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIRGQVF---- 274
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 275 --FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 315
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 200
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIGGQVF---- 255
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 256 --FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 141 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 199
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 200 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIGGQVF---- 254
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 255 --FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 295
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 156 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 214
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 215 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-DEEIIRGQVF---- 269
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 270 --FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 310
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 10/163 (6%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQ-DIRLGDFGLAKMLISDDLAS 133
EE + Q+L A+ + H +LHRD+K NI + ++ +++L DFG + L+ D + +
Sbjct: 142 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDTVYT 200
Query: 134 SVVGTPSYMCPELLADIPY-GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIV 192
GT Y PE + Y G + +WSLG +Y+M F+ D + + ++
Sbjct: 201 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE-HDEEIIGGQVF---- 255
Query: 193 APLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHLQPYVL 235
S + L++ L P RP+ E+ HP +Q +L
Sbjct: 256 --FRQRVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 296
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 38/180 (21%)
Query: 22 QEMELISRVRNPFIVEYKDSWVEKGC------YVCIIIGYCEGGDMAEAIKKANGVHFPE 75
+E+ +++R+++ +I+ D + + Y+ + I D+ + K + E
Sbjct: 76 REITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIA---DSDLKKLFKTP--IFLTE 130
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISD------ 129
+ + L LL+ ++H + I+HRD+K +N L +D +++ DFGLA+ + SD
Sbjct: 131 QHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIV 190
Query: 130 -DLA-------------------SSVVGTPSYMCPEL-LADIPYGSKSDIWSLGCCVYEM 168
DL +S V T Y PEL L Y + DIWS GC E+
Sbjct: 191 NDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 25/180 (13%)
Query: 9 LARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKA 68
L ++ AR+ +E EL++ +++ IV + E G + ++ Y GD+ ++
Sbjct: 79 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-GRPLLMVFEYMRHGDLNRFLRS- 136
Query: 69 NGVHFPEEKLCKW----------LVQLLM-------ALNYLHANHILHRDVKCSNIFLTR 111
H P+ KL L QLL + YL H +HRD+ N + +
Sbjct: 137 ---HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 193
Query: 112 DQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+++GDFG+++ + S D + + +M PE + + ++SD+WS G ++E+
Sbjct: 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 253
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 35 IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHA 94
VE+ D + Y I++ Y G +++K++ G P + +L+++L AL+YLH+
Sbjct: 147 FVEHTDRHGDPVGY--IVMEYVGG----QSLKRSKGQKLPVAEAIAYLLEILPALSYLHS 200
Query: 95 NHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGS 154
+++ D+K NI LT +Q ++L D G + S + GTP + PE++ P
Sbjct: 201 IGLVYNDLKPENIMLTEEQ-LKLIDLGAVSRINS---FGYLYGTPGFQAPEIVRTGPT-V 255
Query: 155 KSDIWSLG 162
+DI+++G
Sbjct: 256 ATDIYTVG 263
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 90/193 (46%), Gaps = 17/193 (8%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLT 110
I I C + E +++ + H E + L Q L +LH+ +I+HRD+K NI ++
Sbjct: 95 IAIELC-AATLQEYVEQKDFAHLGLEPI-TLLQQTTSGLAHLHSLNIVHRDLKPHNILIS 152
Query: 111 RDQ-----DIRLGDFGLAKMLI----SDDLASSVVGTPSYMCPELLADIPYGSKS---DI 158
+ DFGL K L S S V GT ++ PE+L++ + + DI
Sbjct: 153 MPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDI 212
Query: 159 WSLGCCVYEMSAQKAA--FKAFDMQALINKINKSIVAPLPTVYSGAF-RGLVKSMLRKNP 215
+S GC Y + ++ + K+ QA I S+ P + R L++ M+ +P
Sbjct: 213 FSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDP 272
Query: 216 EFRPSAAELLCHP 228
+ RPSA +L HP
Sbjct: 273 QKRPSAKHVLKHP 285
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---A 132
+++ + ++ + YL+A +HR++ N + D +++GDFG+ + + D
Sbjct: 131 QEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 133 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINKINKSI 191
+ +M PE L D + + SD+WS G ++E+ S + ++ + ++ +
Sbjct: 191 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 250
Query: 192 VAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
P L++ + NP RP+ E++
Sbjct: 251 YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 284
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---A 132
+++ + ++ + YL+A +HR++ N + D +++GDFG+ + + D
Sbjct: 130 QEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG 189
Query: 133 SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINKINKSI 191
+ +M PE L D + + SD+WS G ++E+ S + ++ + ++ +
Sbjct: 190 GKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGG 249
Query: 192 VAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELL 225
P L++ + NP RP+ E++
Sbjct: 250 YLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 48 YVCIIIGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNI 107
++ II C+G + ++ A V K + +++ + YLHA ILH+D+K N+
Sbjct: 103 HLAIITSLCKGRTLYSVVRDAKIV-LDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNV 161
Query: 108 FLTRDQDIRLGDFGL---AKMLIS---DDLASSVVGTPSYMCPELLAD---------IPY 152
F + + + DFGL + +L + +D G ++ PE++ +P+
Sbjct: 162 FYDNGK-VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPF 220
Query: 153 GSKSDIWSLGCCVYEMSAQKAAFKAFDMQALINKINKSIVAPLPTVYSG 201
SD+++LG YE+ A++ FK +A+I ++ + L + G
Sbjct: 221 SKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMG 269
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 25/180 (13%)
Query: 9 LARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKA 68
L ++ AR+ +E EL++ +++ IV + E G + ++ Y GD+ ++
Sbjct: 50 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-GRPLLMVFEYMRHGDLNRFLRS- 107
Query: 69 NGVHFPEEKLCKW----------LVQLLM-------ALNYLHANHILHRDVKCSNIFLTR 111
H P+ KL L QLL + YL H +HRD+ N + +
Sbjct: 108 ---HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 164
Query: 112 DQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+++GDFG+++ + S D + + +M PE + + ++SD+WS G ++E+
Sbjct: 165 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 224
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 37/226 (16%)
Query: 20 AHQEMELISRVRN-PFIVE----YKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVHFP 74
A +E+EL R P IV Y++ + + C + I++ +GG++ I+ F
Sbjct: 57 ARREVELHWRASQCPHIVRIVDVYENLYAGRKC-LLIVMECLDGGELFSRIQDRGDQAFT 115
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTR---DQDIRLGDFGLAKMLISDDL 131
E + + + + A+ YLH+ +I HRDVK N+ T + ++L DFG AK +
Sbjct: 116 EREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK- 174
Query: 132 ASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAAFKAF-------DMQALI 184
Y D+WSLG +Y + F + M+ I
Sbjct: 175 --------------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 214
Query: 185 NKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRPSAAELLCHPHL 230
P + S + L++++L+ P R + E + HP +
Sbjct: 215 RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 13 TDRARRSAHQEMELISRVRNPF-IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
T R+ E++++ + + +V + + G + +I+ +C+ G+++ ++
Sbjct: 71 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 130
Query: 72 HFPE-------------EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLG 118
P E L + Q+ + +L + +HRD+ NI L+ +++
Sbjct: 131 FVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 119 DFGLAKMLIS--DDLASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA 174
DFGLA+ + D + P +M PE + D Y +SD+WS G ++E+ + A+
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 25/180 (13%)
Query: 9 LARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKA 68
L ++ AR+ +E EL++ +++ IV + E G + ++ Y GD+ ++
Sbjct: 56 LKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-GRPLLMVFEYMRHGDLNRFLRS- 113
Query: 69 NGVHFPEEKLCKW----------LVQLLM-------ALNYLHANHILHRDVKCSNIFLTR 111
H P+ KL L QLL + YL H +HRD+ N + +
Sbjct: 114 ---HGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 170
Query: 112 DQDIRLGDFGLAKMLISDD---LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM 168
+++GDFG+++ + S D + + +M PE + + ++SD+WS G ++E+
Sbjct: 171 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEI 230
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEK-LCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
+++ Y + GD+ I+ N H P K L + +Q+ + YL + +HRD+ N L
Sbjct: 108 VVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 165
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCC 164
+++ DFGLA+ + + S T + +M E L + +KSD+WS G
Sbjct: 166 DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 225
Query: 165 VYEMSAQKA 173
++E+ + A
Sbjct: 226 LWELMTRGA 234
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 107/281 (38%), Gaps = 60/281 (21%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
+++I L ++ E+ + +P IV Y+ +++ + ++ + G +
Sbjct: 41 VRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-ELWVVTSFMAYGSAKD 99
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
I E + L +L AL+Y+H +HR VK S+I ++ D + L
Sbjct: 100 LICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSN 159
Query: 124 KMLIS--------DDLASSVVGTPSYMCPELLAD--IPYGSKSDIWSLGCCVYEMSAQKA 173
+IS D V ++ PE+L Y +KSDI+S+G E++
Sbjct: 160 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 219
Query: 174 AFKAFDM---QALINKINKSIVAPLPT--------------------------------- 197
FK DM Q L+ K+N ++ L T
Sbjct: 220 PFK--DMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPS 277
Query: 198 -----------VYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
+S F V+ L++NP+ RPSA+ LL H
Sbjct: 278 NGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 318
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 112/293 (38%), Gaps = 71/293 (24%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRNP-----------FIVEYKDSWVEKG---CYVCII 52
+++ R +A E++L+ RV + I++ D + KG +V ++
Sbjct: 49 MKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMV 108
Query: 53 IGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHAN-HILHRDVKCSNIFLTR 111
G ++ IKK P + + QLL+ L+Y+H I+H D+K N+ +
Sbjct: 109 FEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI 167
Query: 112 DQ------DIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCV 165
I++ D G A D+ ++ + T Y PE+L P+G +DIWS C +
Sbjct: 168 VDSPENLIQIKIADLGNA--CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLI 225
Query: 166 YEMSAQKAAFK-------------------------------------AFDMQALINKIN 188
+E+ F+ F+ + L+ I+
Sbjct: 226 FELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNIS 285
Query: 189 KSIVAPLPTVYSGAFR----------GLVKSMLRKNPEFRPSAAELLCHPHLQ 231
K PL V + ++ + ML+ +P R A L+ HP L+
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 338
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 13 TDRARRSAHQEMELISRVRNPF-IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
T R+ E++++ + + +V + + G + +I+ +C+ G+++ ++
Sbjct: 61 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 120
Query: 72 HFPE--------------EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
P E L + Q+ + +L + +HRD+ NI L+ +++
Sbjct: 121 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 180
Query: 118 GDFGLAKMLIS--DDLASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA 174
DFGLA+ + D + P +M PE + D Y +SD+WS G ++E+ + A+
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 240
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 37/230 (16%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE------------- 63
R E L +R+++P +V V K + +I YC GD+ E
Sbjct: 73 REEFRHEAMLRARLQHPNVVCLLGV-VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 131
Query: 64 ---------AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD 114
A++ + VH + Q+ + YL ++H++H+D+ N+ + +
Sbjct: 132 TDDDRTVKSALEPPDFVHL--------VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN 183
Query: 115 IRLGDFGLAKMLISDD----LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-S 169
+++ D GL + + + D L +S++ +M PE + + SDIWS G ++E+ S
Sbjct: 184 VKISDLGLFREVYAADYYKLLGNSLLPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
Query: 170 AQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRP 219
+ + Q ++ I V P P L+ + P RP
Sbjct: 243 YGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRP 292
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEK-LCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
+++ Y + GD+ I+ N H P K L + +Q+ + +L + +HRD+ N L
Sbjct: 110 VVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML 167
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCC 164
+++ DFGLA+ ++ + S T + +M E L + +KSD+WS G
Sbjct: 168 DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 227
Query: 165 VYEMSAQKA 173
++E+ + A
Sbjct: 228 LWELMTRGA 236
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 40/265 (15%)
Query: 2 YVLKKIRLARQTDRARRSAHQEMELISRVR-NPFIVEYKDSWVEKGCYVCIIIGYCEGGD 60
Y +K I +Q +R +E+E + + + N I+E + + E ++ +GG
Sbjct: 41 YAVKIIE--KQAGHSRSRVFREVETLYQCQGNKNILELIE-FFEDDTRFYLVFEKLQGGS 97
Query: 61 MAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD---IRL 117
+ I+K HF E + + + + AL++LH I HRD+K NI + +++
Sbjct: 98 ILAHIQKQK--HFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKI 155
Query: 118 GDFGLAKMLISDDLASSVV--------GTPSYMCPELLADIP-----YGSKSDIWSLGCC 164
DF L + ++ + + G+ YM PE++ Y + D+WSLG
Sbjct: 156 CDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVV 215
Query: 165 VYEMSAQKAAFK-------AFDMQALI----NKINKSIVA---PLPTV----YSGAFRGL 206
+Y M + F +D + NK+ +SI P S + L
Sbjct: 216 LYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDL 275
Query: 207 VKSMLRKNPEFRPSAAELLCHPHLQ 231
+ +L ++ + R SAA++L HP +Q
Sbjct: 276 ISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 107/281 (38%), Gaps = 60/281 (21%)
Query: 4 LKKIRLARQTDRARRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE 63
+++I L ++ E+ + +P IV Y+ +++ + ++ + G +
Sbjct: 57 VRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-ELWVVTSFMAYGSAKD 115
Query: 64 AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLA 123
I E + L +L AL+Y+H +HR VK S+I ++ D + L
Sbjct: 116 LICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSN 175
Query: 124 KMLIS--------DDLASSVVGTPSYMCPELLAD--IPYGSKSDIWSLGCCVYEMSAQKA 173
+IS D V ++ PE+L Y +KSDI+S+G E++
Sbjct: 176 LSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHV 235
Query: 174 AFKAFDM---QALINKINKSIVAPLPT--------------------------------- 197
FK DM Q L+ K+N ++ L T
Sbjct: 236 PFK--DMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPS 293
Query: 198 -----------VYSGAFRGLVKSMLRKNPEFRPSAAELLCH 227
+S F V+ L++NP+ RPSA+ LL H
Sbjct: 294 NGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 112/293 (38%), Gaps = 71/293 (24%)
Query: 7 IRLARQTDRARRSAHQEMELISRVRNP-----------FIVEYKDSWVEKG---CYVCII 52
+++ R +A E++L+ RV + I++ D + KG +V ++
Sbjct: 49 MKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMV 108
Query: 53 IGYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALNYLHAN-HILHRDVKCSNIFLTR 111
G ++ IKK P + + QLL+ L+Y+H I+H D+K N+ +
Sbjct: 109 FEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI 167
Query: 112 DQ------DIRLGDFGLAKMLISDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCV 165
I++ D G A D+ ++ + T Y PE+L P+G +DIWS C +
Sbjct: 168 VDSPENLIQIKIADLGNA--CWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLI 225
Query: 166 YEMSAQKAAFK-------------------------------------AFDMQALINKIN 188
+E+ F+ F+ + L+ I+
Sbjct: 226 FELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNIS 285
Query: 189 KSIVAPLPTVYSGAFR----------GLVKSMLRKNPEFRPSAAELLCHPHLQ 231
K PL V + ++ + ML+ +P R A L+ HP L+
Sbjct: 286 KLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK 338
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEK-LCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
+++ Y + GD+ I+ N H P K L + +Q+ + YL + +HRD+ N L
Sbjct: 109 VVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 166
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCC 164
+++ DFGLA+ + + S T + +M E L + +KSD+WS G
Sbjct: 167 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 226
Query: 165 VYEMSAQKA 173
++E+ + A
Sbjct: 227 LWELMTRGA 235
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEK-LCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
+++ Y + GD+ I+ N H P K L + +Q+ + YL + +HRD+ N L
Sbjct: 108 VVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 165
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCC 164
+++ DFGLA+ + + S T + +M E L + +KSD+WS G
Sbjct: 166 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 225
Query: 165 VYEMSAQKA 173
++E+ + A
Sbjct: 226 LWELMTRGA 234
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 75 EEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASS 134
E+ LC + Q+ + +L +HRD+ N+ +T + +++ DFGLA+ ++SD ++
Sbjct: 172 EDLLC-FAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD--SNY 228
Query: 135 VVGTPS-----YMCPELLADIPYGSKSDIWSLGCCVYEM 168
VV + +M PE L + Y KSD+WS G ++E+
Sbjct: 229 VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 37/230 (16%)
Query: 17 RRSAHQEMELISRVRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAE------------- 63
R E L +R+++P +V V K + +I YC GD+ E
Sbjct: 56 REEFRHEAMLRARLQHPNVVCLLGV-VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGS 114
Query: 64 ---------AIKKANGVHFPEEKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQD 114
A++ + VH + Q+ + YL ++H++H+D+ N+ + +
Sbjct: 115 TDDDRTVKSALEPPDFVHL--------VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN 166
Query: 115 IRLGDFGLAKMLISDD----LASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEM-S 169
+++ D GL + + + D L +S++ +M PE + + SDIWS G ++E+ S
Sbjct: 167 VKISDLGLFREVYAADYYKLLGNSLLPI-RWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
Query: 170 AQKAAFKAFDMQALINKINKSIVAPLPTVYSGAFRGLVKSMLRKNPEFRP 219
+ + Q ++ I V P P L+ + P RP
Sbjct: 226 YGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRP 275
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEK-LCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
+++ Y + GD+ I+ N H P K L + +Q+ + YL + +HRD+ N L
Sbjct: 107 VVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 164
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCC 164
+++ DFGLA+ + + S T + +M E L + +KSD+WS G
Sbjct: 165 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 224
Query: 165 VYEMSAQKA 173
++E+ + A
Sbjct: 225 LWELMTRGA 233
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEK-LCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
+++ Y + GD+ I+ N H P K L + +Q+ + YL + +HRD+ N L
Sbjct: 109 VVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 166
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCC 164
+++ DFGLA+ + + S T + +M E L + +KSD+WS G
Sbjct: 167 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 226
Query: 165 VYEMSAQKA 173
++E+ + A
Sbjct: 227 LWELMTRGA 235
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEK-LCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
+++ Y + GD+ I+ N H P K L + +Q+ + YL + +HRD+ N L
Sbjct: 101 VVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 158
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCC 164
+++ DFGLA+ + + S T + +M E L + +KSD+WS G
Sbjct: 159 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 218
Query: 165 VYEMSAQKA 173
++E+ + A
Sbjct: 219 LWELMTRGA 227
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEK-LCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
+++ Y + GD+ I+ N H P K L + +Q+ + YL + +HRD+ N L
Sbjct: 128 VVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 185
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCC 164
+++ DFGLA+ + + S T + +M E L + +KSD+WS G
Sbjct: 186 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 245
Query: 165 VYEMSAQKA 173
++E+ + A
Sbjct: 246 LWELMTRGA 254
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 13 TDRARRSAHQEMELISRVRNPF-IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
T R+ E++++ + + +V + + G + +I+ +C+ G+++ ++
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 72 HFPE--------------EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
P E L + Q+ + +L + +HRD+ NI L+ +++
Sbjct: 130 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
Query: 118 GDFGLAKMLIS--DDLASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA 174
DFGLA+ + D + P +M PE + D Y +SD+WS G ++E+ + A+
Sbjct: 190 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEK-LCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
+++ Y + GD+ I+ N H P K L + +Q+ + YL + +HRD+ N L
Sbjct: 106 VVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 163
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCC 164
+++ DFGLA+ + + S T + +M E L + +KSD+WS G
Sbjct: 164 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 223
Query: 165 VYEMSAQKA 173
++E+ + A
Sbjct: 224 LWELMTRGA 232
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 13 TDRARRSAHQEMELISRVRNPF-IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
T R+ E++++ + + +V + + G + +I+ +C+ G+++ ++
Sbjct: 70 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 129
Query: 72 HFPE--------------EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
P E L + Q+ + +L + +HRD+ NI L+ +++
Sbjct: 130 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 189
Query: 118 GDFGLAKMLIS--DDLASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA 174
DFGLA+ + D + P +M PE + D Y +SD+WS G ++E+ + A+
Sbjct: 190 CDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEK-LCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
+++ Y + GD+ I+ N H P K L + +Q+ + YL + +HRD+ N L
Sbjct: 104 VVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 161
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCC 164
+++ DFGLA+ + + S T + +M E L + +KSD+WS G
Sbjct: 162 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 221
Query: 165 VYEMSAQKA 173
++E+ + A
Sbjct: 222 LWELMTRGA 230
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 88 ALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDL---ASSVVGTPSYMCP 144
+ YL+A +HRD+ N + D +++GDFG+ + + + +M P
Sbjct: 142 GMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 145 ELLADIPYGSKSDIWSLGCCVYEM-SAQKAAFKAFDMQALINKINKSIVAPLPTVYSGAF 203
E L D + + SD+WS G ++E+ S + ++ + ++ + P
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV 261
Query: 204 RGLVKSMLRKNPEFRPSAAELL 225
L++ + NP+ RP+ E++
Sbjct: 262 TDLMRMCWQFNPKMRPTFLEIV 283
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 13 TDRARRSAHQEMELISRVRNPF-IVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGV 71
T R+ E++++ + + +V + + G + +I+ +C+ G+++ ++
Sbjct: 107 THSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNE 166
Query: 72 HFPE--------------EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRL 117
P E L + Q+ + +L + +HRD+ NI L+ +++
Sbjct: 167 FVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI 226
Query: 118 GDFGLAKMLISDD--LASSVVGTP-SYMCPELLADIPYGSKSDIWSLGCCVYEMSAQKAA 174
DFGLA+ + D + P +M PE + D Y +SD+WS G ++E+ + A+
Sbjct: 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 286
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 76 EKLCKWLVQLLMALNYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLISDDLASSV 135
+ L W +Q+ ++YL ++HRD+ N+ + +++ DFGLA++L D+
Sbjct: 119 QDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA 178
Query: 136 VGTP---SYMCPELLADIPYGSKSDIWSLGCCVYEM 168
G +M E + + +SD+WS G V+E+
Sbjct: 179 DGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWEL 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 51 IIIGYCEGGDMAEAIKKANGVHFPEEK-LCKWLVQLLMALNYLHANHILHRDVKCSNIFL 109
+++ Y + GD+ I+ N H P K L + +Q+ + YL + +HRD+ N L
Sbjct: 127 VVLPYMKHGDLRNFIR--NETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 184
Query: 110 TRDQDIRLGDFGLAKMLISDDLASSVVGTPS-----YMCPELLADIPYGSKSDIWSLGCC 164
+++ DFGLA+ + + S T + +M E L + +KSD+WS G
Sbjct: 185 DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 244
Query: 165 VYEMSAQKA 173
++E+ + A
Sbjct: 245 LWELMTRGA 253
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,428,710
Number of Sequences: 62578
Number of extensions: 656262
Number of successful extensions: 4047
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 1598
Number of HSP's gapped (non-prelim): 1154
length of query: 582
length of database: 14,973,337
effective HSP length: 104
effective length of query: 478
effective length of database: 8,465,225
effective search space: 4046377550
effective search space used: 4046377550
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)