Query 007992
Match_columns 582
No_of_seqs 186 out of 646
Neff 2.9
Searched_HMMs 46136
Date Thu Mar 28 18:03:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007992.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007992hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10343 RNA-binding protein Y 100.0 1.4E-28 3E-33 213.9 13.4 97 153-252 1-97 (97)
2 TIGR00253 RNA_bind_YhbY putati 100.0 5.6E-28 1.2E-32 209.0 13.2 95 155-251 1-95 (95)
3 COG1534 Predicted RNA-binding 99.9 1.6E-26 3.5E-31 201.5 12.4 97 154-252 1-97 (97)
4 PF01985 CRS1_YhbY: CRS1 / Yhb 99.9 1.1E-26 2.4E-31 194.7 10.3 84 155-239 1-84 (84)
5 KOG1990 Poly(A)-specific exori 99.9 2.2E-23 4.9E-28 224.1 7.1 180 116-295 343-527 (564)
6 KOG1990 Poly(A)-specific exori 99.5 3.2E-15 7E-20 161.6 3.3 430 64-514 80-525 (564)
7 cd01019 ZnuA Zinc binding prot 56.9 2.3E+02 0.005 28.9 12.9 129 81-228 123-256 (286)
8 PF09537 DUF2383: Domain of un 53.4 20 0.00043 31.0 4.0 41 263-303 33-74 (111)
9 PRK15326 type III secretion sy 49.7 31 0.00068 30.5 4.6 33 274-306 21-53 (80)
10 PF10446 DUF2457: Protein of u 47.0 18 0.0004 40.3 3.4 9 367-375 45-53 (458)
11 COG4809 Archaeal ADP-dependent 43.9 70 0.0015 35.8 7.1 104 179-292 296-402 (466)
12 KOG1832 HIV-1 Vpr-binding prot 38.3 48 0.001 40.5 5.1 19 384-402 1335-1353(1516)
13 TIGR02284 conserved hypothetic 38.1 85 0.0018 29.1 5.9 41 263-303 32-73 (139)
14 COG1623 Predicted nucleic-acid 31.1 1.9E+02 0.004 31.6 7.6 84 209-302 105-194 (349)
15 PF03641 Lysine_decarbox: Poss 30.7 56 0.0012 29.8 3.4 37 160-196 73-110 (133)
16 PF13382 Adenine_deam_C: Adeni 30.4 1.6E+02 0.0035 28.8 6.6 74 201-295 68-142 (171)
17 PF00158 Sigma54_activat: Sigm 29.9 3.2E+02 0.0069 26.0 8.4 54 158-211 10-66 (168)
18 PF10310 DUF2413: Protein of u 27.3 81 0.0018 35.2 4.5 21 184-204 191-211 (444)
19 PF13604 AAA_30: AAA domain; P 27.1 2.6E+02 0.0057 26.8 7.4 70 154-228 1-72 (196)
20 PF04472 DUF552: Protein of un 26.6 3.1E+02 0.0066 22.8 6.8 55 186-242 12-69 (73)
21 PRK09423 gldA glycerol dehydro 26.1 1.7E+02 0.0036 30.8 6.3 55 161-218 23-80 (366)
22 cd07766 DHQ_Fe-ADH Dehydroquin 24.4 2.3E+02 0.0051 28.9 6.8 25 172-196 25-49 (332)
23 cd08170 GlyDH Glycerol dehydro 23.9 2.1E+02 0.0046 29.7 6.5 48 171-218 23-73 (351)
24 cd08616 PI-PLCXD1c Catalytic d 23.7 5.9E+02 0.013 26.5 9.6 71 181-251 98-187 (290)
25 PF01297 TroA: Periplasmic sol 23.7 2.7E+02 0.0058 27.3 6.9 134 81-231 94-230 (256)
26 cd01295 AdeC Adenine deaminase 22.9 6.3E+02 0.014 27.0 9.9 75 200-295 324-399 (422)
27 PTZ00399 cysteinyl-tRNA-synthe 21.2 2.8E+02 0.0062 32.2 7.4 18 149-166 616-633 (651)
28 cd07909 YciF YciF bacterial st 21.0 2.1E+02 0.0045 27.4 5.3 45 264-308 36-82 (147)
29 COG3416 Uncharacterized protei 20.7 1.7E+02 0.0038 30.3 5.0 44 265-315 52-96 (233)
30 PRK11608 pspF phage shock prot 20.5 3E+02 0.0065 28.6 6.8 52 158-209 17-71 (326)
31 PF04508 Pox_A_type_inc: Viral 20.2 1.1E+02 0.0023 21.7 2.4 18 269-286 2-19 (23)
No 1
>PRK10343 RNA-binding protein YhbY; Provisional
Probab=99.96 E-value=1.4e-28 Score=213.90 Aligned_cols=97 Identities=22% Similarity=0.310 Sum_probs=92.0
Q ss_pred CCCCHHHHHHHHhhcccCCceEEeCCCCCcHHHHHHHHHHhhhCCeEeEEecCCCHHHHHHHHHHHHHHhCCEEEEEEcC
Q 007992 153 ELFTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMIARLSGGIVINIHNV 232 (582)
Q Consensus 153 EmLTsKQRryLRKlAhkLKPVV~IGKrGVTDgVIeeIh~AwK~HELVKVK~lqns~ed~kEiAeeLAe~TGGeLVQVIGg 232 (582)
++||++||+|||++||+|+|+|+||++|||++||.+|..+|++||||||++++++.+++++++++|++.|||++||+||
T Consensus 1 m~Lt~kqr~~LR~~ah~l~Pvv~IGk~Glt~~vi~ei~~aL~~hELIKvkv~~~~~~~~~e~~~~i~~~~~ae~Vq~IG- 79 (97)
T PRK10343 1 MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLIVEAIVRETGACNVQVIG- 79 (97)
T ss_pred CCCCHHHHHHHHHhcCCCCCeEEECCCCCCHHHHHHHHHHHHHCCcEEEEecCCChhHHHHHHHHHHHHHCCEEEeeeC-
Confidence 3699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCCCCCCCCCc
Q 007992 233 KTIIMFRGRNYRQPKNLIPF 252 (582)
Q Consensus 233 ~tIILYRGKNYkrPkilLPr 252 (582)
+++||||+++ .|.+.||+
T Consensus 80 ~~~vlYR~~~--~~~i~lp~ 97 (97)
T PRK10343 80 KTLVLYRPTK--ERKISLPR 97 (97)
T ss_pred cEEEEEecCC--CccCCCCC
Confidence 9999999875 36777774
No 2
>TIGR00253 RNA_bind_YhbY putative RNA-binding protein, YhbY family. A combination of crystal structure, molecular modeling, and bioinformatic data together suggest that members of this family, including YhbY of E. coli, are RNA binding proteins.
Probab=99.95 E-value=5.6e-28 Score=209.05 Aligned_cols=95 Identities=20% Similarity=0.296 Sum_probs=89.5
Q ss_pred CCHHHHHHHHhhcccCCceEEeCCCCCcHHHHHHHHHHhhhCCeEeEEecCCCHHHHHHHHHHHHHHhCCEEEEEEcCeE
Q 007992 155 FTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMIARLSGGIVINIHNVKT 234 (582)
Q Consensus 155 LTsKQRryLRKlAhkLKPVV~IGKrGVTDgVIeeIh~AwK~HELVKVK~lqns~ed~kEiAeeLAe~TGGeLVQVIGg~t 234 (582)
||++||++||++||+|+|+|+|||+|||++||++|+.+|++||||||++++++.++++++|.+|++.|||+|||+|| ++
T Consensus 1 Lt~kqr~~Lr~~ah~l~p~v~IGK~Glt~~vi~ei~~aL~~hELIKVkvl~~~~~~~~e~a~~i~~~~~a~~Vq~iG-~~ 79 (95)
T TIGR00253 1 LTGKQKRHLRGKAHHLKPVVLVGKNGLTEGVIKEIEQALEHRELIKVKVATEDREDKTLIAEALVKETGACNVQVIG-KT 79 (95)
T ss_pred CCHHHHHHHHHHhCCCCCeEEECCCCCCHHHHHHHHHHHHhCCcEEEEecCCChhHHHHHHHHHHHHHCCEEEEEEc-cE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred EEEecCCCCCCCCCCCC
Q 007992 235 IIMFRGRNYRQPKNLIP 251 (582)
Q Consensus 235 IILYRGKNYkrPkilLP 251 (582)
+||||+++. .|.+.+|
T Consensus 80 ~vlYR~~~~-~~~i~l~ 95 (95)
T TIGR00253 80 IVLYRPTKE-RKIIELP 95 (95)
T ss_pred EEEEecCCc-cCCcCCC
Confidence 999998653 3456665
No 3
>COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Translation, ribosomal structure and biogenesis]
Probab=99.94 E-value=1.6e-26 Score=201.46 Aligned_cols=97 Identities=22% Similarity=0.347 Sum_probs=92.9
Q ss_pred CCCHHHHHHHHhhcccCCceEEeCCCCCcHHHHHHHHHHhhhCCeEeEEecCCCHHHHHHHHHHHHHHhCCEEEEEEcCe
Q 007992 154 LFTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMIARLSGGIVINIHNVK 233 (582)
Q Consensus 154 mLTsKQRryLRKlAhkLKPVV~IGKrGVTDgVIeeIh~AwK~HELVKVK~lqns~ed~kEiAeeLAe~TGGeLVQVIGg~ 233 (582)
+||++|+++||++||+++|+|+||++|||++||.+|..+|++||||||++.+++.++.+++|+.|++.+||.+||+|| +
T Consensus 1 ~Lt~kq~~~Lrs~Ah~l~piv~IGk~Glte~vi~Ei~~aL~~reLIKVkvl~~~~edr~eia~~l~~~~~a~lVqviG-~ 79 (97)
T COG1534 1 MLTGKQKRFLRSKAHHLKPIVQIGKNGLTEGVIKEIDRALEARELIKVKVLQNAREDKKEIAEALAEETGAELVQVIG-K 79 (97)
T ss_pred CCcHHHHHHHHHhhccCCceEEecCCccCHHHHHHHHHHHHhCCcEEEEeeccchhhHHHHHHHHHHHhCCEEeeeee-e
Confidence 699999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred EEEEecCCCCCCCCCCCCc
Q 007992 234 TIIMFRGRNYRQPKNLIPF 252 (582)
Q Consensus 234 tIILYRGKNYkrPkilLPr 252 (582)
++|||| .+..++++.+|+
T Consensus 80 ~~vlyr-~~~e~~~i~l~~ 97 (97)
T COG1534 80 TLVLYR-ESKEKRKISLPR 97 (97)
T ss_pred EEEEEe-cCcccccccCCC
Confidence 999999 466667888885
No 4
>PF01985 CRS1_YhbY: CRS1 / YhbY (CRM) domain; InterPro: IPR001890 The CRM domain is an ~100-amino acid RNA-binding domain. The name chloroplast RNA splicing and ribosome maturation (CRM) has been suggested to reflect the functions established for the four characterised members of the family: Zea mays (Maize) CRS1 (Q9FYT6 from SWISSPROT), CAF1 (Q84N49 from SWISSPROT) and CAF2 (Q84N48 from SWISSPROT) proteins and the Escherichia coli protein YhbY (P0AGK4 from SWISSPROT). The CRM domain is found in eubacteria, archaea, and plants. The CRM domain is represented as a stand-alone protein in archaea and bacteria, and in single- and multi-domain proteins in plants. It has been suggested that prokaryotic CRM proteins existed as ribosome-associated proteins prior to the divergence of archaea and bacteria, and that they were co-opted in the plant lineage as RNA binding modules by incorporation into diverse protein contexts. Plant CRM domains are predicted to reside not only in the chloroplast, but also in the mitochondrion and the nucleo/cytoplasmic compartment. The diversity of the CRM domain family in plants suggests a diverse set of RNA targets [, ]. The CRM domain is a compact alpha/beta domain consisting of a four-stranded beta sheet and three alpha helices with an alpha-beta-alpha-beta-alpha-beta-beta topology. The beta sheet face is basic, consistent with a role in RNA binding. Proximal to the basic beta sheet face is another moiety that could contribute to nucleic acid recognition. Connecting strand beta1 and helix alpha2 is a loop with a six amino acid motif, GxxG flanked by large aliphatic residues, within which one 'x' is typically a basic residue []. Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly. GFP fused to a single-domain CRM protein from maize localises to the nucleolus, suggesting that an analogous activity may have been retained in plants []. A CRM domain containing protein in plant chloroplasts has been shown to function in group I and II intron splicing []. In vitro experiments with an isolated maize CRM domain have shown it to have RNA binding activity. These and other results suggest that the CRM domain evolved in the context of ribosome function prior to the divergence of Archaea and Bacteria, that this function has been maintained in extant prokaryotes, and that the domain was recruited to serve as an RNA binding module during the evolution of plant genomes []. YhbY has a fold similar to that of the C-terminal domain of translation initiation factor 3 (IF3C), which binds to 16S rRNA in the 30S ribosome [].; GO: 0003723 RNA binding; PDB: 1RQ8_A 1JO0_B 1LN4_A.
Probab=99.94 E-value=1.1e-26 Score=194.66 Aligned_cols=84 Identities=26% Similarity=0.411 Sum_probs=75.6
Q ss_pred CCHHHHHHHHhhcccCCceEEeCCCCCcHHHHHHHHHHhhhCCeEeEEecCCCHHHHHHHHHHHHHHhCCEEEEEEcCeE
Q 007992 155 FTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMIARLSGGIVINIHNVKT 234 (582)
Q Consensus 155 LTsKQRryLRKlAhkLKPVV~IGKrGVTDgVIeeIh~AwK~HELVKVK~lqns~ed~kEiAeeLAe~TGGeLVQVIGg~t 234 (582)
||++|+++||++||+|+|+|+|||+|||++||++|+.+|++||||||+|++++.++++++|+.|++.|||+|||+|| ++
T Consensus 1 Lt~ke~~~Lr~~a~~l~p~v~IGk~Glt~~vi~~i~~~l~~~eLvKVk~~~~~~~~~~~~~~~l~~~t~~~~V~~iG-~~ 79 (84)
T PF01985_consen 1 LTSKERKFLRKLAHHLKPVVQIGKNGLTDGVIEEIDDALEKHELVKVKVLGNCREDRKEIAEQLAEKTGAEVVQVIG-RT 79 (84)
T ss_dssp --HHHHHHHHHHHTTC--SEEE-TTSS-HHHHHHHHHHHHHHSEEEEEETT--HHHHHHHHHHHHHHHTEEEEEEET-TE
T ss_pred CCHHHHHHHHHHhcCCCCeEEECCCCCCHHHHHHHHHHHHhCCeeEEEEccCCHHHHHHHHHHHHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred EEEec
Q 007992 235 IIMFR 239 (582)
Q Consensus 235 IILYR 239 (582)
+||||
T Consensus 80 ~vlyR 84 (84)
T PF01985_consen 80 IVLYR 84 (84)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99998
No 5
>KOG1990 consensus Poly(A)-specific exoribonuclease PARN [Replication, recombination and repair]
Probab=99.88 E-value=2.2e-23 Score=224.09 Aligned_cols=180 Identities=38% Similarity=0.608 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCC-CCCCCCCHHHHHHHHhhcccCCceEEeCCCCCcHHHHHHHHHHhh
Q 007992 116 EERLIYNLKRAKKKVALLLQKLKKYELPELPPSV-HDPELFTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWK 194 (582)
Q Consensus 116 eerl~~~L~~ak~k~e~ll~KL~k~~~P~~p~p~-~DpEmLTsKQRryLRKlAhkLKPVV~IGKrGVTDgVIeeIh~AwK 194 (582)
++.+.+++..++++.+.....|.++..|..|... ++++.+|.+++.+++++|.+|++++.+|.+|+++|||.++|.||+
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~e~~t~ee~~~~~k~g~k~~~~~~~~rrg~f~g~i~n~~l~wk 422 (564)
T KOG1990|consen 343 TEAIFHKLEKAKKKLASANRILAKLEDPKIPAELRYDPESITEEERLMLRKVGLKMKRRLLSGRRGVFDGVIENMHLHWK 422 (564)
T ss_pred HHHHHHHHhhhhhhccchhhhhhcccccccccccccchhhcChHHHHHHHHHHHhhccccccCCcccccceeecchhhhh
Confidence 4677777888888888887777777777655544 899999999999999999999999999999999999999999999
Q ss_pred hCCeEeEEecCCCH-HHHHHHHHHHHHHhCCEEEEEEcCeE---EEEecCCCCCCCCCCCCcCCCChHHHHHHHHHHHHH
Q 007992 195 FHETVQVCCDNFPK-EKIKEMATMIARLSGGIVINIHNVKT---IIMFRGRNYRQPKNLIPFNTLTKRKALFKARFEQAL 270 (582)
Q Consensus 195 ~HELVKVK~lqns~-ed~kEiAeeLAe~TGGeLVQVIGg~t---IILYRGKNYkrPkilLPrnlLTKrkAL~RS~~~Qrl 270 (582)
+||++||+|+.... ..++..|..++..+|+++|.++.+.. |++|||+||.+|..+.|.++|+||+|+.+++++|++
T Consensus 423 ~~e~~k~i~~~~~~~~~~~~~a~~le~esg~~~v~~~~~~~~~ai~~yr~k~y~~p~~l~P~~~l~~~k~~~~~~~~~~~ 502 (564)
T KOG1990|consen 423 SRELVKVICKEKNLPSQVKQYASALERESGGILVSIDKNPKGYAIIAYRGKNYDRPTSLRPRNLLSRRKALERSLEEQRK 502 (564)
T ss_pred hcccceeeeccccccHHHHHHHHHHHHHhCCceeeeccCCchhhHHHhhhhhccCCcccCchhhhcccCCccccHHHHHH
Confidence 99999999998776 99999999999999999999998655 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCChh
Q 007992 271 ESQKLNIKKIEQQLRRMGTNPEDPV 295 (582)
Q Consensus 271 eslk~~I~~le~~l~~m~~~~e~~~ 295 (582)
++++.||..++++++++.+.-+.+.
T Consensus 503 ~a~~~~i~~~~~~~e~~~~~~~~~~ 527 (564)
T KOG1990|consen 503 EALKSHISDLEQEIEQLQASVEAMP 527 (564)
T ss_pred HHHhhhcchhhhhHHHhhcchhccc
Confidence 9999999999999999988755433
No 6
>KOG1990 consensus Poly(A)-specific exoribonuclease PARN [Replication, recombination and repair]
Probab=99.53 E-value=3.2e-15 Score=161.57 Aligned_cols=430 Identities=17% Similarity=0.140 Sum_probs=305.9
Q ss_pred CCCCCccccccccc-ccccccchHHHHHHHH---HhhhhHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHhcc
Q 007992 64 NYPFNRWSRAMSTS-KRGRSMRSKVERRMQK---ESGKTMREIRRAKKIKKKLMTDEERLIYNLKRAKKKVALLLQKLKK 139 (582)
Q Consensus 64 ~~~~~~~~~~~~t~-~~gr~~~sk~e~rm~k---e~~k~~~elr~~kk~~~k~~~~eerl~~~L~~ak~k~e~ll~KL~k 139 (582)
++.+..|++|+.++ ..|...++....-++. +..+.+.+++.++......|.++..-.+........+++++++++.
T Consensus 80 ~~n~~~~~~g~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~i~~ 159 (564)
T KOG1990|consen 80 GGNFVVWSRGDSISSPEFLCQRSPVDFVARQQENQAGKWPSELEKEKNELLDSLGPELSDWGGSDRLSVDADLLPEKIPD 159 (564)
T ss_pred CCceeeeecCccccCCccceeecchhhhhhhchhhhhhhHHHHHHHHHHHhhccCcccccCCCCCCccchhhhchhhhhc
Confidence 44566787777663 2356667777766666 6666678888888888888888888888777788899999999999
Q ss_pred cCCCCCCCCCCCCCCCCHHHHHHHHhhcccCCceEEeCCCCCcHHHHHHHHHHhhhCCeEeEEecCCC-HHHHHHHHHHH
Q 007992 140 YELPELPPSVHDPELFTPEQLQAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFP-KEKIKEMATMI 218 (582)
Q Consensus 140 ~~~P~~p~p~~DpEmLTsKQRryLRKlAhkLKPVV~IGKrGVTDgVIeeIh~AwK~HELVKVK~lqns-~ed~kEiAeeL 218 (582)
|..|...-|...+..||..+..++|.+|-.+.|++.+|..+...++...|..+|..|+.+|+.+.... ......++..+
T Consensus 160 ~~~p~r~l~~~~~~~l~~~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~~~~rg~~~~~~~~~a~~l 239 (564)
T KOG1990|consen 160 YMRPFRTLPVGSPPLLTSIESTLLRRLGYKLPPHFALGRSRKLQGLAVAMVSFWEKHEFAKILIKRGVLETRKERMADEL 239 (564)
T ss_pred ccChhccCCCCChhhhhhHHHHHHHHhcccccccceehhccccccchhHHHHHHHHHHHHHHHHHhcchhhhccchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888644 44556777777
Q ss_pred --HHHhCCEEEEEEcCeEEEEecCCCCCCCCCCCCcCC--CCh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 007992 219 --ARLSGGIVINIHNVKTIIMFRGRNYRQPKNLIPFNT--LTK-----RKALFKARFEQALESQKLNIKKIEQQLRRMGT 289 (582)
Q Consensus 219 --Ae~TGGeLVQVIGg~tIILYRGKNYkrPkilLPrnl--LTK-----rkAL~RS~~~Qrleslk~~I~~le~~l~~m~~ 289 (582)
-..||+.||..-+ -.+|+||++++-. .+|.++ .+. ...+...++++--+.+...+.....++..++.
T Consensus 240 ~~~~~tg~~lv~hN~-~~dv~y~~~~Fl~---~lp~~l~~f~~~~~~fp~~~~~~~~~~~~~~~~~~~~~t~~e~~~~~~ 315 (564)
T KOG1990|consen 240 QELLLTGKVLVLHNK-LLDVMYRYKNFLS---PLPSTLEEFTDSSSMFPNIEDTKRLAKLSEYQKLNLKATLLELARAKA 315 (564)
T ss_pred HHHHhcCCeEEeecc-ceeeeeehhhccc---ccchhHHHhhhhhhhhhhhHHHHHhhccccccchhhhhhHHHHHHHhc
Confidence 8899999999665 8999999999874 444433 333 34456666666444445578888999999999
Q ss_pred CCCChhHHHHHHHhhhhcccccccccCCCccccCCCcccccccCCCCccCCCCCCCchHHHHHHHHHHhhhhhhhHHHHH
Q 007992 290 NPEDPVAMASIQRVASTFFNAIDQKEGSPYVFRGEREVSVVEPGKRIEESEPPVDSDQEELDKFIAEIEDAADKEWAEEE 369 (582)
Q Consensus 290 ~~e~~~~m~~~~~v~s~~~~~~d~~e~~~~v~~~~~~~~~~~~~~~~~~~~~~~d~~q~~l~~f~~~~~~~~~~~~~~~~ 369 (582)
..+.|.+++++.+.....|......+...++|+.+.+.-.-..........+...-...++. ..++.+.+++|....
T Consensus 316 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~e~~t~ee~~~~~ 392 (564)
T KOG1990|consen 316 KKEKEIERRSISSRLKLEFEKASSEKLTEAIFHKLEKAKKKLASANRILAKLEDPKIPAELR---YDPESITEEERLMLR 392 (564)
T ss_pred ccccCcccccccchhhhhhhccchhhHHHHHHHHHhhhhhhccchhhhhhcccccccccccc---cchhhcChHHHHHHH
Confidence 99999999999998999999999999999999986665555444444444433311112222 567888999999999
Q ss_pred HHHHhhhcccccccccccCcccccCCcCCCCCCchhhhcccCcccccccccCCCCCCCCCCccccCCCCCCCCCCCChhh
Q 007992 370 EAEKEELTRIRYWDREEIGGRFRRSENFRNSDMDDISRRTVGWKDNRAKKRIIDSDDEHDSSDVRNGSDLQSDAYDSDEA 449 (582)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sDE~ 449 (582)
....+...++.+|+|..|+|.......+.....-+..+-... . .+...+...++++-.+ +..... -++.
T Consensus 393 k~g~k~~~~~~~~rrg~f~g~i~n~~l~wk~~e~~k~i~~~~-~-~~~~~~~~a~~le~es------g~~~v~---~~~~ 461 (564)
T KOG1990|consen 393 KVGLKMKRRLLSGRRGVFDGVIENMHLHWKSRELVKVICKEK-N-LPSQVKQYASALERES------GGILVS---IDKN 461 (564)
T ss_pred HHHHhhccccccCCcccccceeecchhhhhhcccceeeeccc-c-ccHHHHHHHHHHHHHh------CCceee---eccC
Confidence 999999999999999999999777777765555555544322 1 1122222222222222 111111 1233
Q ss_pred hhh--hhhhHHHHhhhhcccccccccccccccccccccccCccccccccccchhhhhccCCCchhhh
Q 007992 450 HDE--FNRSRVERRKQEKFGRAREYEGRKRNVEADFSRKMTNEDSESENMFSDVENAMWKSESEDEH 514 (582)
Q Consensus 450 ~~r--F~~sR~~~~k~~~~~R~rn~~~~~Rnaea~fr~~~~~edSese~mLsD~dnamW~sd~eee~ 514 (582)
+.. +-..|.+.-.++-.=|+++.-. +|-+-++.... .- ...-..-.++++..+|.....-..
T Consensus 462 ~~~~ai~~yr~k~y~~p~~l~P~~~l~-~~k~~~~~~~~-~~-~~a~~~~i~~~~~~~e~~~~~~~~ 525 (564)
T KOG1990|consen 462 PKGYAIIAYRGKNYDRPTSLRPRNLLS-RRKALERSLEE-QR-KEALKSHISDLEQEIEQLQASVEA 525 (564)
T ss_pred CchhhHHHhhhhhccCCcccCchhhhc-ccCCccccHHH-HH-HHHHhhhcchhhhhHHHhhcchhc
Confidence 333 3555666665444446666644 33333222221 00 111225567888888888776663
No 7
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=56.87 E-value=2.3e+02 Score=28.85 Aligned_cols=129 Identities=12% Similarity=0.096 Sum_probs=79.7
Q ss_pred cccchHHHHHHHHHhhhhHHHHHHHHHHHHhhcCHHHHHHH--HHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCC--
Q 007992 81 RSMRSKVERRMQKESGKTMREIRRAKKIKKKLMTDEERLIY--NLKRAKKKVALLLQKLKKYELPELPPSVHDPELFT-- 156 (582)
Q Consensus 81 r~~~sk~e~rm~ke~~k~~~elr~~kk~~~k~~~~eerl~~--~L~~ak~k~e~ll~KL~k~~~P~~p~p~~DpEmLT-- 156 (582)
-|++...-.+|.+...+.|.++- ++..-.| +.++-.++...|.+.++....+- + ....+|
T Consensus 123 iWldp~n~~~~a~~I~~~L~~~d-----------P~~~~~y~~N~~~~~~~L~~l~~~~~~~~~~~---~--~~~~v~~H 186 (286)
T cd01019 123 LWLSPENAAEVAQAVAEKLSALD-----------PDNAATYAANLEAFNARLAELDATIKERLAPV---K--TKPFFVFH 186 (286)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHC-----------chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---C--CCeEEEec
Confidence 57888888888888888887641 1111111 22223333333333333322121 0 112222
Q ss_pred HHHHHHHHhhcccCCceEEeC-CCCCcHHHHHHHHHHhhhCCeEeEEecCCCHHHHHHHHHHHHHHhCCEEEE
Q 007992 157 PEQLQAYKKIGFRNKNYVPVG-VRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMIARLSGGIVIN 228 (582)
Q Consensus 157 sKQRryLRKlAhkLKPVV~IG-KrGVTDgVIeeIh~AwK~HELVKVK~lqns~ed~kEiAeeLAe~TGGeLVQ 228 (582)
+.=.++.+..|.+..+++.+. -...+..-|.++-..++.+.+-=|-+.... -..++..|++.+|+.++.
T Consensus 187 ~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~---~~~~~~~ia~~~g~~v~~ 256 (286)
T cd01019 187 DAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQF---HPKIAETLAEGTGAKVGE 256 (286)
T ss_pred ccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCC---ChHHHHHHHHhcCceEEE
Confidence 445677888888877766654 478999999999999999886555544332 247999999999987655
No 8
>PF09537 DUF2383: Domain of unknown function (DUF2383); InterPro: IPR019052 This entry represents a functionally uncharacterised ferritin like domain.; PDB: 3FSE_B.
Probab=53.45 E-value=20 Score=31.03 Aligned_cols=41 Identities=15% Similarity=0.448 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCh-hHHHHHHHh
Q 007992 263 KARFEQALESQKLNIKKIEQQLRRMGTNPEDP-VAMASIQRV 303 (582)
Q Consensus 263 RS~~~Qrleslk~~I~~le~~l~~m~~~~e~~-~~m~~~~~v 303 (582)
|..+.+....-+.|+.+|...|..||..|++. ..+..++|+
T Consensus 33 k~~f~~~~~~~~~~~~~L~~~i~~~Gg~p~~~gs~~g~~~r~ 74 (111)
T PF09537_consen 33 KSLFQEFAQERQQHAEELQAEIQELGGEPEESGSFKGALHRA 74 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT--H----HHCHHHH-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcCcccCHHHHHHHH
Confidence 45566667777889999999999999998774 477788884
No 9
>PRK15326 type III secretion system needle complex protein PrgI; Provisional
Probab=49.66 E-value=31 Score=30.48 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhcCCCCChhHHHHHHHhhhh
Q 007992 274 KLNIKKIEQQLRRMGTNPEDPVAMASIQRVAST 306 (582)
Q Consensus 274 k~~I~~le~~l~~m~~~~e~~~~m~~~~~v~s~ 306 (582)
+.+-.+|++.|..|..+|.+|.+.|.+|++-+.
T Consensus 21 ~~~~~~l~~Al~~l~~~pdnP~~LA~~Qa~l~e 53 (80)
T PRK15326 21 DNLQTQVTEALDKLAAKPSDPALLAAYQSKLSE 53 (80)
T ss_pred HHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHH
Confidence 456677999999999999999999999996654
No 10
>PF10446 DUF2457: Protein of unknown function (DUF2457); InterPro: IPR018853 This entry represents a family of uncharacterised proteins.
Probab=46.96 E-value=18 Score=40.30 Aligned_cols=9 Identities=78% Similarity=0.933 Sum_probs=5.7
Q ss_pred HHHHHHHhh
Q 007992 367 EEEEAEKEE 375 (582)
Q Consensus 367 ~~~~~~~~~ 375 (582)
+||.|++||
T Consensus 45 aEEEA~~EE 53 (458)
T PF10446_consen 45 AEEEAEEEE 53 (458)
T ss_pred HHHHHhhcc
Confidence 556666666
No 11
>COG4809 Archaeal ADP-dependent phosphofructokinase/glucokinase [Carbohydrate transport and metabolism]
Probab=43.86 E-value=70 Score=35.82 Aligned_cols=104 Identities=16% Similarity=0.067 Sum_probs=82.8
Q ss_pred CCCcHHHHHHHHHHhhhCCeEeEEecCCCHHHHHHHHHHHHHHhCCEEEEEEcCeEEEEecCCCCCCCCCCCCcCCCC--
Q 007992 179 RGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMIARLSGGIVINIHNVKTIIMFRGRNYRQPKNLIPFNTLT-- 256 (582)
Q Consensus 179 rGVTDgVIeeIh~AwK~HELVKVK~lqns~ed~kEiAeeLAe~TGGeLVQVIGg~tIILYRGKNYkrPkilLPrnlLT-- 256 (582)
=|+.+.=|+++-..+-++||.+=++..+...++-+-+.+|...+|-+.|||+- .-.+||=- .|-|-|+
T Consensus 296 vGldE~ElA~vl~vlG~~eLa~~I~~~~~~~avieg~~~L~~e~~~e~i~vHT-~~y~l~i~---------~~~npl~~E 365 (466)
T COG4809 296 VGLDEVELANVLNVLGYRELADRIISKDDIEAVIEGAMILLDELGLERIHVHT-YGYYLAIT---------KRGNPLSGE 365 (466)
T ss_pred cCCCHHHHHHHHHhhChHHHHHhhhccccHHHHHHHHHHHHHhcCccEEEEEE-eeEEEEEe---------cCCCcccHH
Confidence 47888889999999999999998888888899999999999999999999875 44444421 1122254
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q 007992 257 -KRKALFKARFEQALESQKLNIKKIEQQLRRMGTNPE 292 (582)
Q Consensus 257 -KrkAL~RS~~~Qrleslk~~I~~le~~l~~m~~~~e 292 (582)
.|+||-=|.-..+-.++.-+|..+...-+-|+|+-.
T Consensus 366 e~~daL~Fs~~lAa~~A~~GnIe~~~d~~~glkvp~~ 402 (466)
T COG4809 366 ELRDALLFSTLLAAAKAMLGNIERLDDLKEGLKVPIS 402 (466)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccchhhHHhhccCCch
Confidence 788999999999999999999988887777777643
No 12
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=38.26 E-value=48 Score=40.50 Aligned_cols=19 Identities=21% Similarity=0.356 Sum_probs=13.8
Q ss_pred ccccCcccccCCcCCCCCC
Q 007992 384 REEIGGRFRRSENFRNSDM 402 (582)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~ 402 (582)
++-|+..||..+...|.+-
T Consensus 1335 k~p~fSSFRTf~a~dYs~i 1353 (1516)
T KOG1832|consen 1335 KHPLFSSFRTFDAIDYSDI 1353 (1516)
T ss_pred ccchhhhhccccccccccc
Confidence 4567788888887777653
No 13
>TIGR02284 conserved hypothetical protein. Members of this protein family are found mostly in the Proteobacteria, although one member is found in the the marine planctomycete Pirellula sp. strain 1. The function is unknown.
Probab=38.10 E-value=85 Score=29.14 Aligned_cols=41 Identities=17% Similarity=0.364 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-hhHHHHHHHh
Q 007992 263 KARFEQALESQKLNIKKIEQQLRRMGTNPED-PVAMASIQRV 303 (582)
Q Consensus 263 RS~~~Qrleslk~~I~~le~~l~~m~~~~e~-~~~m~~~~~v 303 (582)
|+.+.+....=..||.+|...+..||-.|++ +..|..+||.
T Consensus 32 k~~f~~~~~~~~~~~~eL~~~v~~lGg~p~~~gs~~g~lhr~ 73 (139)
T TIGR02284 32 ATLFRRIAGEKSAIVSELQQVVASLGGKPEDHGSMVGSLHQF 73 (139)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 4455555555567999999999999988775 7788899994
No 14
>COG1623 Predicted nucleic-acid-binding protein (contains the HHH domain) [General function prediction only]
Probab=31.07 E-value=1.9e+02 Score=31.59 Aligned_cols=84 Identities=23% Similarity=0.305 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHhCCEEEEEEc-CeEEEEecCCCCCCCCCCCCcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 007992 209 EKIKEMATMIARLSGGIVINIHN-VKTIIMFRGRNYRQPKNLIPFNTLTKRKALFKARFEQALESQKLNIKKIEQQLRRM 287 (582)
Q Consensus 209 ed~kEiAeeLAe~TGGeLVQVIG-g~tIILYRGKNYkrPkilLPrnlLTKrkAL~RS~~~Qrleslk~~I~~le~~l~~m 287 (582)
.-++..|+-+|..||..||.|-- -++|.||.+ |++. .+. .-|.--++.-|++..|-.+-..|.+-+.+|
T Consensus 105 GtRHRTAER~AkqTG~~VIaiS~rrNvITlY~~-~~ky--~L~-------d~~~il~ranQAi~TLEkYk~~Ld~~~~~L 174 (349)
T COG1623 105 GTRHRTAERVAKQTGNPVIAISERRNVITLYVG-NLKY--VLK-------DSAFILSRANQAIQTLEKYKTVLDRVLNQL 174 (349)
T ss_pred ccccchHHHHHHHhCCeEEEEecccceEEEEec-Ceee--eec-------ChHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 45789999999999999999764 259999985 4431 111 122223456788888888888888888888
Q ss_pred cCC-CCC----hhHHHHHHH
Q 007992 288 GTN-PED----PVAMASIQR 302 (582)
Q Consensus 288 ~~~-~e~----~~~m~~~~~ 302 (582)
.+. -|+ -+-++-+||
T Consensus 175 ~~lEledlVT~~DV~~v~qR 194 (349)
T COG1623 175 NLLELEDLVTLHDVVSVLQR 194 (349)
T ss_pred hhHHHhhhhhHHHHHHHHHH
Confidence 776 344 335566676
No 15
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=30.67 E-value=56 Score=29.80 Aligned_cols=37 Identities=11% Similarity=0.188 Sum_probs=29.9
Q ss_pred HHHHHhhcccCC-ceEEeCCCCCcHHHHHHHHHHhhhC
Q 007992 160 LQAYKKIGFRNK-NYVPVGVRGVFGGVVQNMHLHWKFH 196 (582)
Q Consensus 160 RryLRKlAhkLK-PVV~IGKrGVTDgVIeeIh~AwK~H 196 (582)
--.|.+++.+-+ |+|.++..|-++.+++.|+......
T Consensus 73 ~~~~~~l~~~~~~Piil~~~~g~w~~l~~~l~~~~~~g 110 (133)
T PF03641_consen 73 ALTLMQLGRHNKVPIILLNIDGFWDPLLEFLDRMIEEG 110 (133)
T ss_dssp HHHHHHTTSSTS-EEEEEECGGCCHHHHHHHHHHHHTT
T ss_pred HHHHHhhccccCCCEEEeCCcchHHHHHHHHHHHHHCC
Confidence 344677888888 9999999999999999997555543
No 16
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=30.44 E-value=1.6e+02 Score=28.82 Aligned_cols=74 Identities=19% Similarity=0.335 Sum_probs=53.8
Q ss_pred EEecCCCHHHHHHHHHHHHHHhCCEEEEEEcCeEEEEecCCCCCCCCCCCCc-CCCChHHHHHHHHHHHHHHHHHHHHHH
Q 007992 201 VCCDNFPKEKIKEMATMIARLSGGIVINIHNVKTIIMFRGRNYRQPKNLIPF-NTLTKRKALFKARFEQALESQKLNIKK 279 (582)
Q Consensus 201 VK~lqns~ed~kEiAeeLAe~TGGeLVQVIGg~tIILYRGKNYkrPkilLPr-nlLTKrkAL~RS~~~Qrleslk~~I~~ 279 (582)
|.+.+.+.++|..+++.|.+.-||++|-.-| .++.. ..||- -++|-. ..+.+...+.+
T Consensus 68 iiviG~~~~dm~~A~n~l~~~gGG~vvv~~g-~v~a~----------lpLpi~GlmS~~----------~~eev~~~~~~ 126 (171)
T PF13382_consen 68 IIVIGTNDEDMALAANRLIEMGGGIVVVDDG-EVLAE----------LPLPIAGLMSDL----------PAEEVARQLEE 126 (171)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTSEEEEEETT-EEEEE----------EE-TBTTTBBSS-----------HHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHhCCCEEEEECC-EEEEE----------EeccccceecCC----------CHHHHHHHHHH
Confidence 4566788999999999999999999988665 42221 34555 445543 34667778889
Q ss_pred HHHHHHHhcCCCCChh
Q 007992 280 IEQQLRRMGTNPEDPV 295 (582)
Q Consensus 280 le~~l~~m~~~~e~~~ 295 (582)
|++.+++||....+|.
T Consensus 127 l~~~~~~lG~~~~~p~ 142 (171)
T PF13382_consen 127 LEEALRELGCPFDDPF 142 (171)
T ss_dssp HHHHHHTTS-BTTTBS
T ss_pred HHHHHHHcCCCCCCHH
Confidence 9999999999988887
No 17
>PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor. These have a conserved domain of about 230 residues involved in the ATP-dependent [, ] interaction with sigma-54. About half of the proteins in which this domain is found (algB, dcdT, flbD, hoxA, hupR1, hydG, ntrC, pgtA and pilR) belong to signal transduction two-component systems [] and possess a domain that can be phosphorylated by a sensor-kinase protein in their N-terminal section. Almost all of these proteins possess a helix-turn-helix DNA-binding domain in their C-terminal section. The domain which interacts with the sigma-54 factor has an ATPase activity. This may be required to promote a conformational change necessary for the interaction []. The domain contains an atypical ATP-binding motif A (P-loop) as well as a form of motif B. The two ATP-binding motifs are located in the N-terminal section of the domain.; GO: 0005524 ATP binding, 0008134 transcription factor binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1NY6_K 3M0E_G 1NY5_A 1OJL_A 3DZD_B 2C9C_A 2C98_A 2C96_A 2BJV_A 2C99_A ....
Probab=29.88 E-value=3.2e+02 Score=25.96 Aligned_cols=54 Identities=15% Similarity=0.183 Sum_probs=40.9
Q ss_pred HHHHHHHhhcccCCceEEeCCCCCcHHHHH-HHHHHhh--hCCeEeEEecCCCHHHH
Q 007992 158 EQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ-NMHLHWK--FHETVQVCCDNFPKEKI 211 (582)
Q Consensus 158 KQRryLRKlAhkLKPVV~IGKrGVTDgVIe-eIh~AwK--~HELVKVK~lqns~ed~ 211 (582)
+-+..++++|..--||+..|-.|.--.++. .||..-. ..-.|.|.|...+.+..
T Consensus 10 ~~~~~~~~~a~~~~pVlI~GE~GtGK~~lA~~IH~~s~r~~~pfi~vnc~~~~~~~~ 66 (168)
T PF00158_consen 10 RLREQAKRAASSDLPVLITGETGTGKELLARAIHNNSPRKNGPFISVNCAALPEELL 66 (168)
T ss_dssp HHHHHHHHHTTSTS-EEEECSTTSSHHHHHHHHHHCSTTTTS-EEEEETTTS-HHHH
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcHHHHHHHHHHhhhcccCCeEEEehhhhhcchh
Confidence 346778899999999999999999988776 6777654 35799999998776544
No 18
>PF10310 DUF2413: Protein of unknown function (DUF2413); InterPro: IPR018814 This entry represents a family of proteins conserved in fungi. Their function is not known.
Probab=27.32 E-value=81 Score=35.17 Aligned_cols=21 Identities=14% Similarity=0.237 Sum_probs=14.9
Q ss_pred HHHHHHHHHhhhCCeEeEEec
Q 007992 184 GVVQNMHLHWKFHETVQVCCD 204 (582)
Q Consensus 184 gVIeeIh~AwK~HELVKVK~l 204 (582)
.++..|--=+..||++.|.+-
T Consensus 191 ~il~tlappIs~hE~L~Ihl~ 211 (444)
T PF10310_consen 191 NILNTLAPPISSHERLQIHLT 211 (444)
T ss_pred HHHHHhCCCccccceEEEEEE
Confidence 455555555578999999875
No 19
>PF13604 AAA_30: AAA domain; PDB: 1W36_G 3K70_G 3UPU_B 3GPL_A 3E1S_A 3GP8_A.
Probab=27.14 E-value=2.6e+02 Score=26.81 Aligned_cols=70 Identities=13% Similarity=0.020 Sum_probs=47.1
Q ss_pred CCCHHHHHHHHhhcccCCceEEe-CCCCCcHH-HHHHHHHHhhhCCeEeEEecCCCHHHHHHHHHHHHHHhCCEEEE
Q 007992 154 LFTPEQLQAYKKIGFRNKNYVPV-GVRGVFGG-VVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMIARLSGGIVIN 228 (582)
Q Consensus 154 mLTsKQRryLRKlAhkLKPVV~I-GKrGVTDg-VIeeIh~AwK~HELVKVK~lqns~ed~kEiAeeLAe~TGGeLVQ 228 (582)
.||++|+..++.+...-+.++.| |..|.--. ++..+..+|..+. .+|.+.... ..++..|...+|....-
T Consensus 1 ~L~~~Q~~a~~~~l~~~~~~~~l~G~aGtGKT~~l~~~~~~~~~~g-~~v~~~apT----~~Aa~~L~~~~~~~a~T 72 (196)
T PF13604_consen 1 TLNEEQREAVRAILTSGDRVSVLQGPAGTGKTTLLKALAEALEAAG-KRVIGLAPT----NKAAKELREKTGIEAQT 72 (196)
T ss_dssp -S-HHHHHHHHHHHHCTCSEEEEEESTTSTHHHHHHHHHHHHHHTT---EEEEESS----HHHHHHHHHHHTS-EEE
T ss_pred CCCHHHHHHHHHHHhcCCeEEEEEECCCCCHHHHHHHHHHHHHhCC-CeEEEECCc----HHHHHHHHHhhCcchhh
Confidence 48999999999997666666555 98886443 5567888999987 677766555 35666677777754433
No 20
>PF04472 DUF552: Protein of unknown function (DUF552); InterPro: IPR007561 This entry represents a cell division protein, designated SepF, which is conserved in Gram-positive bacteria. SepF accumulates at the cell division site in an FtsZ-dependent manner and is required for proper septum formation []. Mutants are viable but the formation of the septum is much slower and occurs with a very abnormal morphology. This entry also includes archaeal related proteins of unknown function.; GO: 0000917 barrier septum formation; PDB: 3P04_A.
Probab=26.64 E-value=3.1e+02 Score=22.77 Aligned_cols=55 Identities=11% Similarity=0.215 Sum_probs=37.1
Q ss_pred HHHHHHHhhhCCeEeEEecCCCHHHHHHHHHHHHH---HhCCEEEEEEcCeEEEEecCCC
Q 007992 186 VQNMHLHWKFHETVQVCCDNFPKEKIKEMATMIAR---LSGGIVINIHNVKTIIMFRGRN 242 (582)
Q Consensus 186 IeeIh~AwK~HELVKVK~lqns~ed~kEiAeeLAe---~TGGeLVQVIGg~tIILYRGKN 242 (582)
+.+|-.+++...+|-|.+.....+..+.+...|+. ..+|.++.+ | ..++||=|++
T Consensus 12 ~~~i~~~l~~g~~Vivnl~~l~~~~~~Ri~Dfl~G~~~al~G~i~~i-~-~~~~l~~P~~ 69 (73)
T PF04472_consen 12 AREIVDALREGKIVIVNLENLDDEEAQRILDFLSGAVYALDGDIQKI-S-EKVFLLTPKG 69 (73)
T ss_dssp HHHHHHHHHTT--EEEE-TTS-HHHHHHHHHHHHHHHHHTT-EEEEE-E-TTEEEEE---
T ss_pred HHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHhchheeeCCEEEEE-c-CCEEEEECCC
Confidence 34578899999999999999888888888888765 679999994 6 5566665443
No 21
>PRK09423 gldA glycerol dehydrogenase; Provisional
Probab=26.13 E-value=1.7e+02 Score=30.81 Aligned_cols=55 Identities=16% Similarity=0.137 Sum_probs=27.9
Q ss_pred HHHHhhcccCCceEEeCCCCCcHHHHHHHHHHhhhC--CeEeEEecCCC-HHHHHHHHHHH
Q 007992 161 QAYKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFH--ETVQVCCDNFP-KEKIKEMATMI 218 (582)
Q Consensus 161 ryLRKlAhkLKPVV~IGKrGVTDgVIeeIh~AwK~H--ELVKVK~lqns-~ed~kEiAeeL 218 (582)
..|+++| +.++.|.-.++...+.+.+...|+.+ +.+-+.+.+++ .+.+.++++.+
T Consensus 23 ~~l~~~g---~~~livtd~~~~~~~~~~v~~~l~~~~~~~~~~~~~~ep~~~~v~~~~~~~ 80 (366)
T PRK09423 23 EYLKPLG---KRALVIADEFVLGIVGDRVEASLKEAGLTVVFEVFNGECSDNEIDRLVAIA 80 (366)
T ss_pred HHHHHcC---CEEEEEEChhHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCHHHHHHHHHHH
Confidence 3455555 44445555566666777777777665 32222333333 34444444443
No 22
>cd07766 DHQ_Fe-ADH Dehydroquinate synthase-like (DHQ-like) and iron-containing alcohol dehydrogenases (Fe-ADH). Dehydroquinate synthase-like. This superfamily divides into two subgroups: the dehydroquinate synthase-like, and a large metal-containing alcohol dehydrogenases (ADH), known as iron-containing alcohol dehydrogenases. Dehydroquinate synthase (DHQS) catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) to dehydroquinate (DHQ) in the second step of the shikimate pathway. This pathway involves seven sequential enzymatic steps in the conversion of erythrose 4-phosphate and phosphoenolpyruvate into chorismate for subsequent synthesis of aromatic compounds. Dehydroquinate synthase-like group includes dehydroquinate synthase, 2-deoxy-scyllo-inosose synthase, and 2-epi-5-epi-valiolone synthase. The alcohol dehydrogenases in this superfamily contain a dehydroquinate synthase-like protein structural fold and mostly contain iron. They are distinct from other alc
Probab=24.37 E-value=2.3e+02 Score=28.87 Aligned_cols=25 Identities=24% Similarity=0.155 Sum_probs=12.3
Q ss_pred ceEEeCCCCCcHHHHHHHHHHhhhC
Q 007992 172 NYVPVGVRGVFGGVVQNMHLHWKFH 196 (582)
Q Consensus 172 PVV~IGKrGVTDgVIeeIh~AwK~H 196 (582)
.++.|.-.++.+++...+...|+.+
T Consensus 25 ~~liv~~~~~~~~~~~~v~~~l~~~ 49 (332)
T cd07766 25 RALVVSDEGVVKGVGEKVADSLKKL 49 (332)
T ss_pred eEEEEeCCchhhhHHHHHHHHHHhc
Confidence 3444444455555555555555543
No 23
>cd08170 GlyDH Glycerol dehydrogenases (GlyDH) catalyzes oxidation of glycerol to dihydroxyacetone in glycerol dissmilation. Glycerol dehydrogenases (GlyDH) is a key enzyme in the glycerol dissimilation pathway . In anaerobic conditions, many microorganisms utilize glycerol as a source of carbon through coupled oxidative and reductive pathways. One of the pathways involves the oxidation of glycerol to dihydroxyacetone with the reduction of NAD+ to NADH catalyzed by glycerol dehydrogenases. Dihydroxyacetone is then phosphorylated by dihydroxyacetone kinase and enters the glycolytic pathway for further degradation. The activity of GlyDH is zinc-dependent. The zinc ion plays a role in stabilizing an alkoxide intermediate at the active site.
Probab=23.88 E-value=2.1e+02 Score=29.65 Aligned_cols=48 Identities=10% Similarity=-0.038 Sum_probs=27.2
Q ss_pred CceEEeCCCCCcHHHHHHHHHHhhhCCeE--eEEecCCC-HHHHHHHHHHH
Q 007992 171 KNYVPVGVRGVFGGVVQNMHLHWKFHETV--QVCCDNFP-KEKIKEMATMI 218 (582)
Q Consensus 171 KPVV~IGKrGVTDgVIeeIh~AwK~HELV--KVK~lqns-~ed~kEiAeeL 218 (582)
+.+|.|+..++..++++.|..+|+.+-+. -..+.+++ .+.+.++++.+
T Consensus 23 ~r~livt~~~~~~~~~~~v~~~L~~~~i~~~~~~~~~~p~~~~v~~~~~~~ 73 (351)
T cd08170 23 KRALIIADEFVLDLVGAKIEESLAAAGIDARFEVFGGECTRAEIERLAEIA 73 (351)
T ss_pred CeEEEEECHHHHHHHHHHHHHHHHhCCCeEEEEEeCCcCCHHHHHHHHHHH
Confidence 45566666667777888888888776331 12233333 34455554443
No 24
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1. This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to
Probab=23.74 E-value=5.9e+02 Score=26.45 Aligned_cols=71 Identities=15% Similarity=0.294 Sum_probs=50.0
Q ss_pred CcHHHHHHHHHHhhhC--CeEeEEecC---CCHHHHHHHHHHHHHHhCCEEEEEE--------------cCeEEEEecCC
Q 007992 181 VFGGVVQNMHLHWKFH--ETVQVCCDN---FPKEKIKEMATMIARLSGGIVINIH--------------NVKTIIMFRGR 241 (582)
Q Consensus 181 VTDgVIeeIh~AwK~H--ELVKVK~lq---ns~ed~kEiAeeLAe~TGGeLVQVI--------------Gg~tIILYRGK 241 (582)
..+.|+.+|..-|..| |+|-+.+.. ...++-..+...|....|..++..- |.++||+|+..
T Consensus 98 ~~~~~L~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~~~~~~tL~~l~~~~krVIi~y~~~ 177 (290)
T cd08616 98 LVKEILEEINDFLTEHPKEVVILDFNHFYGMTEEDHEKLLKMIKSIFGKKLCPRDPDLLNVTLEYLWEKGYQVIVFYHDP 177 (290)
T ss_pred hHHHHHHHHHHHHHHCCCcEEEEEEEccCCCCHHHHHHHHHHHHHHhcccccCCCCCcCcCcHHHHHhCCCEEEEEECCC
Confidence 7778999999999986 999999873 4445567788888888777765321 44589999865
Q ss_pred CCCCCCCCCC
Q 007992 242 NYRQPKNLIP 251 (582)
Q Consensus 242 NYkrPkilLP 251 (582)
....|...-|
T Consensus 178 ~~~~~~~~w~ 187 (290)
T cd08616 178 VAKKPPYLWP 187 (290)
T ss_pred ccccCccccc
Confidence 4433333333
No 25
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=23.67 E-value=2.7e+02 Score=27.33 Aligned_cols=134 Identities=13% Similarity=0.138 Sum_probs=75.7
Q ss_pred cccchHHHHHHHHHhhhhHHHHHHHHH--HHHhhcCHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCHH
Q 007992 81 RSMRSKVERRMQKESGKTMREIRRAKK--IKKKLMTDEERLIYNLKRAKKKVALLLQKLKKYELPELPPSVHDPELFTPE 158 (582)
Q Consensus 81 r~~~sk~e~rm~ke~~k~~~elr~~kk--~~~k~~~~eerl~~~L~~ak~k~e~ll~KL~k~~~P~~p~p~~DpEmLTsK 158 (582)
-|+....-.+|..+....|.++.=+.+ -++.+ +.++..|.....+....++.+.. .+ --...+.
T Consensus 94 ~Wldp~~~~~~~~~Ia~~L~~~~P~~~~~y~~N~----~~~~~~L~~l~~~~~~~~~~~~~--~~--------~v~~h~~ 159 (256)
T PF01297_consen 94 VWLDPENAKKMAEAIADALSELDPANKDYYEKNA----EKYLKELDELDAEIKEKLAKLPG--RP--------VVVYHDA 159 (256)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHTGGGHHHHHHHH----HHHHHHHHHHHHHHHHHHTTSSG--GE--------EEEEEST
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCccchHHHHHHH----HHHHHHHHHHHHHHHHHhhcccC--Ce--------EEEEChH
Confidence 578888999999998888877521100 01111 11122222222222223333321 00 0111233
Q ss_pred HHHHHHhhcccCCceEEe-CCCCCcHHHHHHHHHHhhhCCeEeEEecCCCHHHHHHHHHHHHHHhCCEEEEEEc
Q 007992 159 QLQAYKKIGFRNKNYVPV-GVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMIARLSGGIVINIHN 231 (582)
Q Consensus 159 QRryLRKlAhkLKPVV~I-GKrGVTDgVIeeIh~AwK~HELVKVK~lqns~ed~kEiAeeLAe~TGGeLVQVIG 231 (582)
--.+++..|.+...++.+ .....+..-|.++...++.+.+--|.+.... ...++..|+..+|..+|.+..
T Consensus 160 ~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~i~~e~~~---~~~~~~~la~~~g~~vv~ld~ 230 (256)
T PF01297_consen 160 FQYFAKRYGLKVIGVIEISPGEEPSPKDLAELIKLIKENKVKCIFTEPQF---SSKLAEALAKETGVKVVYLDP 230 (256)
T ss_dssp THHHHHHTT-EEEEEESSSSSSSS-HHHHHHHHHHHHHTT-SEEEEETTS----THHHHHHHHCCT-EEEESST
T ss_pred HHHHHHhcCCceeeeeccccccCCCHHHHHHHHHHhhhcCCcEEEecCCC---ChHHHHHHHHHcCCcEEEeCC
Confidence 457888888887777733 4566899999999999999986455544332 236889999999988877554
No 26
>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine. This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.
Probab=22.91 E-value=6.3e+02 Score=27.02 Aligned_cols=75 Identities=20% Similarity=0.361 Sum_probs=55.5
Q ss_pred eEEecCCCHHHHHHHHHHHHHHhCCEEEEEEcCeEEEEecCCCCCCCCCCCCc-CCCChHHHHHHHHHHHHHHHHHHHHH
Q 007992 200 QVCCDNFPKEKIKEMATMIARLSGGIVINIHNVKTIIMFRGRNYRQPKNLIPF-NTLTKRKALFKARFEQALESQKLNIK 278 (582)
Q Consensus 200 KVK~lqns~ed~kEiAeeLAe~TGGeLVQVIGg~tIILYRGKNYkrPkilLPr-nlLTKrkAL~RS~~~Qrleslk~~I~ 278 (582)
-|.|.+.+.++|..+++.|.+.-||.+|-.-| +++-. +.||- -|+|-. ..+.+-..+.
T Consensus 324 n~~~~g~~~~~~~~a~~~~~~~~gg~~~~~~~-~~~~~----------~~l~~~g~~s~~----------~~~~~~~~~~ 382 (422)
T cd01295 324 NIIVIGTNDEDMALAVNRLKEIGGGIVVVKNG-KVLAE----------LPLPIAGLMSDE----------PAEEVAEELK 382 (422)
T ss_pred cEEEEECCHHHHHHHHHHHHHhCCcEEEEECC-EEEEE----------eccccccccCCC----------CHHHHHHHHH
Confidence 45566789999999999999999999887555 43321 34565 455543 2456667788
Q ss_pred HHHHHHHHhcCCCCChh
Q 007992 279 KIEQQLRRMGTNPEDPV 295 (582)
Q Consensus 279 ~le~~l~~m~~~~e~~~ 295 (582)
+|++.+++||...++|.
T Consensus 383 ~~~~~~~~~g~~~~~p~ 399 (422)
T cd01295 383 KLREALRELGYALDDPF 399 (422)
T ss_pred HHHHHHHHcCCCCCChH
Confidence 89999999999888885
No 27
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional
Probab=21.22 E-value=2.8e+02 Score=32.19 Aligned_cols=18 Identities=17% Similarity=0.086 Sum_probs=14.3
Q ss_pred CCCCCCCCHHHHHHHHhh
Q 007992 149 VHDPELFTPEQLQAYKKI 166 (582)
Q Consensus 149 ~~DpEmLTsKQRryLRKl 166 (582)
+.+.+.||..|++.|++.
T Consensus 616 d~~G~~~sk~~~kkl~K~ 633 (651)
T PTZ00399 616 DADGEEISKKERKKLSKE 633 (651)
T ss_pred CCCCCCCCHHHHHHHHHH
Confidence 345677999999999875
No 28
>cd07909 YciF YciF bacterial stress response protein, ferritin-like iron-binding domain. YciF is a bacterial protein of unknown function that is up-regulated when bacteria experience stress conditions, and is highly conserved in a broad range of bacterial species. YciF has a ferritin-like domain. Ferritin-like, diiron-carboxylate proteins participate in a range of functions including iron regulation, mono-oxygenation, and reactive radical production. These proteins are characterized by the fact that they catalyze dioxygen-dependent oxidation-hydroxylation reactions within diiron centers; one exception is manganese catalase, which catalyzes peroxide-dependent oxidation-reduction within a dimanganese center. Diiron-carboxylate proteins are further characterized by the presence of duplicate metal ligands, glutamates and histidines (ExxH) and two additional glutamates within a four-helix bundle. Outside of these conserved residues there is little obvious homology. Members include bacterio
Probab=21.02 E-value=2.1e+02 Score=27.39 Aligned_cols=45 Identities=27% Similarity=0.479 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-h-hHHHHHHHhhhhcc
Q 007992 264 ARFEQALESQKLNIKKIEQQLRRMGTNPED-P-VAMASIQRVASTFF 308 (582)
Q Consensus 264 S~~~Qrleslk~~I~~le~~l~~m~~~~e~-~-~~m~~~~~v~s~~~ 308 (582)
+...+-++-.+.||..||+=++.||..|.. + ++|..+-.-+..|.
T Consensus 36 ~~l~~H~~eT~~qi~rLe~if~~lg~~~~~~~c~~m~gli~e~~~~~ 82 (147)
T cd07909 36 EAFESHLEETEGQVERLEQIFESLGEKPEGKKCKAMEGLIKEAEELI 82 (147)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCccCcchHHHHHHHHHHHHH
Confidence 445666777888999999999999999876 3 67776654444433
No 29
>COG3416 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.69 E-value=1.7e+02 Score=30.33 Aligned_cols=44 Identities=23% Similarity=0.235 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-CCChhHHHHHHHhhhhccccccccc
Q 007992 265 RFEQALESQKLNIKKIEQQLRRMGTN-PEDPVAMASIQRVASTFFNAIDQKE 315 (582)
Q Consensus 265 ~~~Qrleslk~~I~~le~~l~~m~~~-~e~~~~m~~~~~v~s~~~~~~d~~e 315 (582)
+.+|+|..++.+|++||++|..|.-. +..+ -.-|.||+|=.+.|
T Consensus 52 iqE~ALk~a~~~i~eLe~ri~~lq~~~~~sg-------sFLs~~f~~gt~~e 96 (233)
T COG3416 52 IQEQALKKASTQIKELEKRIAILQAGEAGSG-------SFLSNAFKWGTPQE 96 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCc-------chhhhhcccCCCCC
Confidence 46788999999999999999998765 2222 14578887776665
No 30
>PRK11608 pspF phage shock protein operon transcriptional activator; Provisional
Probab=20.54 E-value=3e+02 Score=28.64 Aligned_cols=52 Identities=15% Similarity=0.262 Sum_probs=41.3
Q ss_pred HHHHHHHhhcccCCceEEeCCCCCcHHHHH-HHHHHhh--hCCeEeEEecCCCHH
Q 007992 158 EQLQAYKKIGFRNKNYVPVGVRGVFGGVVQ-NMHLHWK--FHETVQVCCDNFPKE 209 (582)
Q Consensus 158 KQRryLRKlAhkLKPVV~IGKrGVTDgVIe-eIh~AwK--~HELVKVK~lqns~e 209 (582)
.=+..++++|..-.||+.+|-.|.--..+. .||..-. ...+|.|.|...+..
T Consensus 17 ~~~~~i~~~a~~~~pVlI~GE~GtGK~~lA~~iH~~s~r~~~pfv~v~c~~~~~~ 71 (326)
T PRK11608 17 EVLEQVSRLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCAALNEN 71 (326)
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCcHHHHHHHHHHhCCccCCCeEEEeCCCCCHH
Confidence 456778888988999999999999988775 6776554 357999999986543
No 31
>PF04508 Pox_A_type_inc: Viral A-type inclusion protein repeat ; InterPro: IPR007596 The repeat is found in the A-type inclusion protein of the Poxvirus family [].; GO: 0016032 viral reproduction
Probab=20.22 E-value=1.1e+02 Score=21.75 Aligned_cols=18 Identities=22% Similarity=0.396 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 007992 269 ALESQKLNIKKIEQQLRR 286 (582)
Q Consensus 269 rleslk~~I~~le~~l~~ 286 (582)
.++.+|..|..||.+|..
T Consensus 2 E~~rlr~rI~dLer~L~~ 19 (23)
T PF04508_consen 2 EMNRLRNRISDLERQLSE 19 (23)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 356789999999999975
Done!