Citrus Sinensis ID: 007997

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580--

MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMKLGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRCNLPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNSRLLRKQLMEEHEQAIELERRRLSEMQLACKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSSQGLNLPESPFASPIGSGISTVI

ccHHHHHHHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHcccHHHcccccccccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHccccccccccccccccccccccccccEEEEccccccccHHHHHHHHcccccccCEECcccccccEEEEEEccHHHHHHHHHcccccEEcccEEEECcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc

***TESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMKLGL************************************************************IEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPAL************PEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPES***I*********************RLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRCNLPHGQHSVILAEDVPKYLEYSGE**DPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKY**KMQHPMFCSLHFTDGDTELHTM***C******************************ACKP******************************************************************LPESPFASPIG*GI**VI

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MDFTESTKAVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRLAFSPDHLIYSLINEAKMKLGLGKPTVSPPISPASVADLPLQFAPFSPASTRPVSSPASMRAAASPFWDPQMAADQQQQVNSIEFVQPGYSDTAAEDFCLQNQMQFLTLEDQFDSVNSVNSDFSSSYFYPEPALGHVRTSRRSPSLPEFPVKVCHYFNKGFCKHGNNCRYFHGHPMPESFSQIFSPNANDIRNEDHVFSPGSLERLEAEITELLKQRRGFPISIASLPMMYYEKYGKTLQAEGYLTESQRHGKAGYSLTKLLARLKNSIRLIDRCNLPHGQHSVILAEDVPKYLEYSGEKSDPGGIVAGSRQIYLTFPAESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILAKGNPHFVCGARVLVKPYREKSRLVDRKYVEKMQHPMFCSLHFTDGDTELHTMPRACNNxxxxxxxxxxxxxxxxxxxxxxxxxxxxxCKPMNHHSYFGYSMDELQVSEAPAEQGDFPSAERFNYLLDVLNNGSTSEDQVSHISTHYNDQDSSQGLNLPESPFASPIGSGISTVI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Zinc finger CCCH domain-containing protein 18	Possesses ribonuclease activitiy in vitro.	probable	Q9SJ41
Zinc finger CCCH domain-containing protein 54		probable	Q6ZK57

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1L3K, chain A
Confidence level:very confident
Coverage over the Query: 350-426
View the alignment between query and template
View the model in PyMOL

Template: 2D9N, chain A
Confidence level:confident
Coverage over the Query: 190-214
View the alignment between query and template
View the model in PyMOL

Template: 1NMR, chain A
Confidence level:probable
Coverage over the Query: 8-62
View the alignment between query and template
View the model in PyMOL