BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007998
(582 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FX24|PPR71_ARATH Pentatricopeptide repeat-containing protein At1g34160
OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2
Length = 581
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/589 (60%), Positives = 439/589 (74%), Gaps = 23/589 (3%)
Query: 4 LNALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHA 63
+ ++QKC VS IKQLQ+H T G FQS +RS+++E A+SP +L++A
Sbjct: 6 METMIQKC-----VSFSQIKQLQSHFLTAGHFQSSF--LRSRLLERCAISPFGDLSFAVQ 58
Query: 64 LFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSH------RSDALTCSFALKA 117
+FR I P TND+NA++RG A SS P+ A WYR ML+ S R DALTCSF LKA
Sbjct: 59 IFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKA 118
Query: 118 CARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASW 177
CAR L Q+H + R G AD+LL TTLLD Y+K G+++SA K+FDEM VRD+ASW
Sbjct: 119 CARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASW 178
Query: 178 NALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKI-HEYI 236
NALIAGL GN ASEA++L+KRM+ EG+ + +EVTV+ AL AC HLG KEG+ I H Y
Sbjct: 179 NALIAGLVSGNRASEAMELYKRMETEGI-RRSEVTVVAALGACSHLGDVKEGENIFHGYS 237
Query: 237 REERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRA 296
+ NV+V NA IDMY+KCG +DKA++VF+ +KS+VTWNTM+ FAVHG+ RA
Sbjct: 238 ND-----NVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRA 292
Query: 297 LELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDL 356
LE+F+++ G+KPDDVSYLAAL AC HAGLV+ G+ +FN+MA GV+ NMKHYG VVDL
Sbjct: 293 LEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDL 352
Query: 357 LGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDF 416
L RAGRL+EA DI+ S+SM D VLWQ+LLGA ++Y DVEMAEIASR++ EMG NN GDF
Sbjct: 353 LSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDF 412
Query: 417 VLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIY 476
VLLSN+YAA RW DVGRVR M+++ VKK+PG SYIE G IH+F+ SDKSH +WREIY
Sbjct: 413 VLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIY 472
Query: 477 EKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLI---STSEATSI 533
EK+DEI FKI+E GY A T VLHDIGEEEKENALCYHSEKLAVA+GL+ E + +
Sbjct: 473 EKIDEIRFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPV 532
Query: 534 QVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
+V NLRIC DCH V K ISK+Y REIIVRDRVRFHRFKDG+CSC+D+W
Sbjct: 533 RVINNLRICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>sp|Q9LXY5|PP284_ARATH Pentatricopeptide repeat-containing protein At3g56550
OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1
Length = 581
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 235/586 (40%), Positives = 374/586 (63%), Gaps = 25/586 (4%)
Query: 7 LLQKCSSNGAVSHIHIKQLQAHLTTTG-QFQSKLFPVRSKIIEFYALSPLNELAYAHALF 65
+LQ C+S + IH +H+ G Q +F + ++ F A+S L++A LF
Sbjct: 11 MLQGCNSMKKLRKIH-----SHVIINGLQHHPSIF---NHLLRFCAVSVTGSLSHAQLLF 62
Query: 66 RQINA-PSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGS-HRSDALTCSFALKACARVLA 123
++ PST+D+N ++RG ++SS P N++L+Y +ML S R D T +FALK+C R+ +
Sbjct: 63 DHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKS 122
Query: 124 LFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAG 183
+ + L+IH V+R GFL DA++ T+L+ Y+ G + A KVFDEM VRD+ SWN +I
Sbjct: 123 IPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICC 182
Query: 184 LAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDM 243
+ L ++A+ ++KRM EGV + T++ L++C H+ A G +H + R +
Sbjct: 183 FSHVGLHNQALSMYKRMGNEGVCG-DSYTLVALLSSCAHVSALNMGVMLHRIACDIRCES 241
Query: 244 NVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQM 303
V V NA+IDMYAKCG L+ A VF+ ++ ++ ++TWN+M++ + VHG G A+ F +M
Sbjct: 242 CVFVSNALIDMYAKCGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 304 GRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMAN-CGVKPNMKHYGSVVDLLGRAGR 362
+GV+P+ +++L L C+H GLV +GV F M++ + PN+KHYG +VDL GRAG+
Sbjct: 301 VASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQ 360
Query: 363 LQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNL 422
L+ + +++ + S D VLW+TLLG+C+++ ++E+ E+A +KLV++ + N GD+VL++++
Sbjct: 361 LENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSI 420
Query: 423 YAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEI 482
Y+A +RK +++ D++ VPG+S+IE+G +HKF DK H + IY +L E+
Sbjct: 421 YSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEV 480
Query: 483 MFKIKEYGY----AAGTSCVLHD--IGEEEKENALCYHSEKLAVAFGLISTSEATSIQVF 536
+ + GY + T+ L D +G + HSEKLA+A+GL+ T+ T++++
Sbjct: 481 INRAILAGYKPEDSNRTAPTLSDRCLGSADTS-----HSEKLAIAYGLMRTTAGTTLRIT 535
Query: 537 KNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
KNLR+CRDCH K +SK +NREIIVRDRVRFH F DG CSC DYW
Sbjct: 536 KNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 243/613 (39%), Positives = 361/613 (58%), Gaps = 46/613 (7%)
Query: 4 LNALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRS-KIIEFYALSPLNELAYAH 62
L L+ K S V IH L+ +L ++ PV + K+ YA ++ ++
Sbjct: 32 LAVLIDKSQSVDEVLQIHAAILRHNLLLHPRY-----PVLNLKLHRAYASH--GKIRHSL 84
Query: 63 ALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVL 122
ALF Q P F A + + + A L Y Q+L + T S LK+C+
Sbjct: 85 ALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS 144
Query: 123 ALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVR---------- 172
IH+HVL+ G D + T L+DVYAK G++VSA+KVFD M R
Sbjct: 145 GKL----IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMIT 200
Query: 173 ---------------------DIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEV 211
DI SWN +I G AQ ++A+ LF+++ EG KP+E+
Sbjct: 201 CYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEI 260
Query: 212 TVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNI 271
TV+ AL+AC +GA + G IH +++ R+ +NV VC +IDMY+KCG L++A VF++
Sbjct: 261 TVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDT 320
Query: 272 KCRKSLVTWNTMVMAFAVHGDGPRALELFEQM-GRAGVKPDDVSYLAALCACNHAGLVDD 330
RK +V WN M+ +A+HG AL LF +M G G++P D++++ L AC HAGLV++
Sbjct: 321 P-RKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNE 379
Query: 331 GVRLFNSMAN-CGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGAC 389
G+R+F SM G+KP ++HYG +V LLGRAG+L+ A + +K+++M D VLW ++LG+C
Sbjct: 380 GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSC 439
Query: 390 QLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPG 449
+L+GD + + + L+ + N G +VLLSN+YA+ ++ V +VR MK + + K PG
Sbjct: 440 KLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPG 499
Query: 450 FSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKEN 509
S IE+ +H+F D+ H K +EIY L +I +IK +GY T+ VL D+ E EKE
Sbjct: 500 ISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQ 559
Query: 510 ALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFH 569
+L HSE+LA+A+GLIST + +++FKNLR+C DCH V KLISK+ R+I++RDR RFH
Sbjct: 560 SLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFH 619
Query: 570 RFKDGACSCKDYW 582
F DG+CSC D+W
Sbjct: 620 HFTDGSCSCGDFW 632
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/588 (39%), Positives = 363/588 (61%), Gaps = 12/588 (2%)
Query: 4 LNALLQKC----SSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELA 59
L +++KC + G S ++Q+ A G S + I +L ++
Sbjct: 11 LLPMVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS 70
Query: 60 YAHALFRQINAPSTNDF--NAVLRGLAHSSKPTNAVLWYRQM-LRGSHRSDALTCSFALK 116
YAH +F +I P N F N ++RG A +A YR+M + G D T F +K
Sbjct: 71 YAHKVFSKIEKP-INVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIK 129
Query: 117 ACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIAS 176
A + + IHS V+R GF + + +LL +YA G++ SA KVFD+M +D+ +
Sbjct: 130 AVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA 189
Query: 177 WNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYI 236
WN++I G A+ EA+ L+ M +G+ KP+ T++ L+AC +GA G ++H Y+
Sbjct: 190 WNSVINGFAENGKPEEALALYTEMNSKGI-KPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Query: 237 REERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRA 296
+ L N+ N ++D+YA+CG +++A +FD + K+ V+W ++++ AV+G G A
Sbjct: 249 IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 297 LELFEQM-GRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSM-ANCGVKPNMKHYGSVV 354
+ELF+ M G+ P +++++ L AC+H G+V +G F M ++P ++H+G +V
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 355 DLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCG 414
DLL RAG++++A + +KS+ M ++V+W+TLLGAC ++GD ++AE A +++++ N+ G
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 415 DFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWRE 474
D+VLLSN+YA+ +RW DV ++RK M VKKVPG S +EVG +H+F DKSH +
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDA 487
Query: 475 IYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQ 534
IY KL E+ +++ GY S V D+ EEEKENA+ YHSEK+A+AF LIST E + I
Sbjct: 488 IYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPIT 547
Query: 535 VFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
V KNLR+C DCH IKL+SKVYNREI+VRDR RFH FK+G+CSC+DYW
Sbjct: 548 VVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/557 (41%), Positives = 353/557 (63%), Gaps = 13/557 (2%)
Query: 35 FQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVL 94
+QS +F V S +I Y S +L A +F +I + + +++RG + +AV
Sbjct: 107 YQSDIF-VSSALIVMY--STCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVS 163
Query: 95 WYRQMLRGSHRSD------ALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTT 148
++ +L + D ++ + AC+RV A T IHS V++ GF +G T
Sbjct: 164 LFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNT 223
Query: 149 LLDVYAKVGE--IVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVF 206
LLD YAK GE + A+K+FD++ +D S+N++++ AQ +++EA ++F+R+ V
Sbjct: 224 LLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVV 283
Query: 207 KPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFE 266
N +T+ L A H GA + G IH+ + L+ +V+V ++IDMY KCG ++ A +
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARK 343
Query: 267 VFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAG 326
FD +K K++ +W M+ + +HG +ALELF M +GV+P+ +++++ L AC+HAG
Sbjct: 344 AFDRMK-NKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402
Query: 327 LVDDGVRLFNSM-ANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTL 385
L +G R FN+M GV+P ++HYG +VDLLGRAG LQ+A D+++ + M D ++W +L
Sbjct: 403 LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSL 462
Query: 386 LGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVK 445
L AC+++ +VE+AEI+ +L E+ S+NCG ++LLS++YA RW DV RVR MKNR +
Sbjct: 463 LAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLV 522
Query: 446 KVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEE 505
K PGFS +E+ G +H F D+ H + +IYE L E+ K+ E GY + TS V HD+ EE
Sbjct: 523 KPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEE 582
Query: 506 EKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDR 565
EKE L HSEKLA+AFG+++T +++ V KNLR+C DCH+VIKLISK+ +RE +VRD
Sbjct: 583 EKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDA 642
Query: 566 VRFHRFKDGACSCKDYW 582
RFH FKDG CSC DYW
Sbjct: 643 KRFHHFKDGGCSCGDYW 659
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 166/340 (48%), Gaps = 16/340 (4%)
Query: 42 VRSKIIEFYALSPL------NELAYAHALF-RQINAPSTNDFNAVLRGLAHSSKPTNAVL 94
VRSK F ++S L E LF R ++ +N+V+ LA S A+L
Sbjct: 3 VRSKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALL 62
Query: 95 WYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYA 154
+ M + S + A+KAC+ + +F Q H G+ +D + + L+ +Y+
Sbjct: 63 AFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYS 122
Query: 155 KVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKM-----EGVFKPN 209
G++ A+KVFDE+ R+I SW ++I G A +AV LFK + + + +
Sbjct: 123 TCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLD 182
Query: 210 EVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGL--LDKAFEV 267
+ ++ ++AC + A + IH ++ + D V V N ++D YAK G + A ++
Sbjct: 183 SMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKI 242
Query: 268 FDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKP-DDVSYLAALCACNHAG 326
FD I K V++N+++ +A G A E+F ++ + V + ++ L A +H+G
Sbjct: 243 FDQI-VDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSG 301
Query: 327 LVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEA 366
+ G + + + G++ ++ S++D+ + GR++ A
Sbjct: 302 ALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETA 341
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/560 (39%), Positives = 338/560 (60%), Gaps = 10/560 (1%)
Query: 24 QLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRGL 83
Q+ + T TG + V + I Y S ++ ALFR+ P +NA++ G
Sbjct: 242 QIHSLATKTGCYSHDY--VLTGFISLY--SKCGKIKMGSALFREFRKPDIVAYNAMIHGY 297
Query: 84 AHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLADA 143
+ + ++ +++++ R + T + ++ ++ IH + L+ FL+ A
Sbjct: 298 TSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHA 354
Query: 144 LLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKME 203
+ T L VY+K+ EI SA+K+FDE + + SWNA+I+G Q L +A+ LF+ M+ +
Sbjct: 355 SVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQ-K 413
Query: 204 GVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDK 263
F PN VT+ L+AC LGA G +H+ +R + ++ V A+I MYAKCG + +
Sbjct: 414 SEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAE 473
Query: 264 AFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACN 323
A +FD + +K+ VTWNTM+ + +HG G AL +F +M +G+ P V++L L AC+
Sbjct: 474 ARRLFD-LMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACS 532
Query: 324 HAGLVDDGVRLFNSMAN-CGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLW 382
HAGLV +G +FNSM + G +P++KHY +VD+LGRAG LQ A ++++S+ +W
Sbjct: 533 HAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVW 592
Query: 383 QTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNR 442
+TLLGAC+++ D +A S KL E+ +N G VLLSN+++A + VR+ K R
Sbjct: 593 ETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKR 652
Query: 443 DVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDI 502
+ K PG++ IE+G H F + D+SH + +EIYEKL+++ K++E GY T LHD+
Sbjct: 653 KLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDV 712
Query: 503 GEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIV 562
EEE+E + HSE+LA+AFGLI+T T I++ KNLR+C DCH V KLISK+ R I+V
Sbjct: 713 EEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVV 772
Query: 563 RDRVRFHRFKDGACSCKDYW 582
RD RFH FKDG CSC DYW
Sbjct: 773 RDANRFHHFKDGVCSCGDYW 792
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 52 LSPLNELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSH-RSDALT 110
LS L + YA +F + P FN ++RG + + P +++ + + + + + ++ T
Sbjct: 62 LSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSST 121
Query: 111 CSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMG 170
+FA+ A + IH + G ++ LLG+ ++ +Y K + A+KVFD M
Sbjct: 122 YAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP 181
Query: 171 VRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGD 230
+D WN +I+G + + E++ +F+ + E + + T+L L A L + G
Sbjct: 182 EKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGM 241
Query: 231 KIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVH 290
+IH + + V I +Y+KCG + +F + + +V +N M+ + +
Sbjct: 242 QIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFR-KPDIVAYNAMIHGYTSN 300
Query: 291 GDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLV 328
G+ +L LF+++ +G + + ++ + H L+
Sbjct: 301 GETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 65.9 bits (159), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 116/271 (42%), Gaps = 3/271 (1%)
Query: 129 QIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGN 188
Q H+ ++ HGF D L T L + +G I A+ +F + D+ +N L+ G +
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 189 LASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVC 248
++ +F ++ KPN T A++A + G IH + D +++
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 249 NAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQM-GRAG 307
+ ++ MY K ++ A +VFD + K + WNTM+ + + ++++F + +
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMISGYRKNEMYVESIQVFRDLINESC 216
Query: 308 VKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEAC 367
+ D + L L A + G+++ + G + + L + G+++
Sbjct: 217 TRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
Query: 368 DIVKSVSMGTDMVLWQTLLGACQLYGDVEMA 398
+ + D+V + ++ G+ E++
Sbjct: 277 ALFREFR-KPDIVAYNAMIHGYTSNGETELS 306
>sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protein At1g31920
OS=Arabidopsis thaliana GN=PCMP-H11 PE=2 SV=1
Length = 606
Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/528 (39%), Positives = 340/528 (64%), Gaps = 2/528 (0%)
Query: 56 NELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFAL 115
N + YA ++FR I+ P T DFN ++RG + A+ +Y +M++ + D T L
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 116 KACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIA 175
KAC R+ ++ E QIH V + G AD + +L+++Y + GE+ + VF+++ + A
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA 199
Query: 176 SWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEY 235
SW+++++ A + SE + LF+ M E K E ++ AL AC + GA G IH +
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 236 IREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPR 295
+ ++N++V +++DMY KCG LDKA +F ++ R +L T++ M+ A+HG+G
Sbjct: 260 LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNL-TYSAMISGLALHGEGES 318
Query: 296 ALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCG-VKPNMKHYGSVV 354
AL +F +M + G++PD V Y++ L AC+H+GLV +G R+F M G V+P +HYG +V
Sbjct: 319 ALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLV 378
Query: 355 DLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCG 414
DLLGRAG L+EA + ++S+ + + V+W+T L C++ ++E+ +IA+++L+++ S+N G
Sbjct: 379 DLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPG 438
Query: 415 DFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWRE 474
D++L+SNLY+ + WDDV R R + + +K+ PGFS +E+ G H+F + D+SH K +E
Sbjct: 439 DYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKE 498
Query: 475 IYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQ 534
IY+ L ++ +++K GY+ + +L ++ EEEK+ L HS+K+A+AFGL+ T + I+
Sbjct: 499 IYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLYTPPGSIIK 558
Query: 535 VFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
+ +NLR+C DCH K IS +Y REI+VRDR RFH FK G CSCKDYW
Sbjct: 559 IARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/610 (37%), Positives = 359/610 (58%), Gaps = 37/610 (6%)
Query: 6 ALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALF 65
ALLQ CSS + IH L+ HL + S+L + F P N L YA+ +F
Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFN--KPTNLLGYAYGIF 74
Query: 66 RQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALF 125
QI P+ FN ++R + ++P+ A +Y QML+ D +T F +KA + + +
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 126 ETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGL- 184
Q HS ++R GF D + +L+ +YA G I +A ++F +MG RD+ SW +++AG
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 185 ------------------------------AQGNLASEAVDLFKRMKMEGVFKPNEVTVL 214
A+ N +A+DLF+ MK EGV NE ++
Sbjct: 195 KCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVV-ANETVMV 253
Query: 215 GALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCR 274
+++C HLGA + G++ +EY+ + + +N+++ A++DM+ +CG ++KA VF+ +
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 275 KSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRL 334
SL +W++++ AVHG +A+ F QM G P DV++ A L AC+H GLV+ G+ +
Sbjct: 314 DSL-SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 335 FNSMA-NCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYG 393
+ +M + G++P ++HYG +VD+LGRAG+L EA + + + + + + LLGAC++Y
Sbjct: 373 YENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYK 432
Query: 394 DVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYI 453
+ E+AE L+++ + G +VLLSN+YA +WD + +R MK + VKK PG+S I
Sbjct: 433 NTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLI 492
Query: 454 EVGGVIHKF-FTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALC 512
E+ G I+KF D+ H + +I K +EI+ KI+ GY T D+ EEEKE+++
Sbjct: 493 EIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIH 552
Query: 513 YHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFK 572
HSEKLA+A+G++ T T+I++ KNLR+C DCH V KLIS+VY RE+IVRDR RFH F+
Sbjct: 553 MHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFR 612
Query: 573 DGACSCKDYW 582
+G CSC+DYW
Sbjct: 613 NGVCSCRDYW 622
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 232/612 (37%), Positives = 361/612 (58%), Gaps = 55/612 (8%)
Query: 22 IKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLN--ELAYAHALFRQINAPSTNDFNAV 79
+ Q+ A +GQ + L ++I+ F A S L+ +L YAH +F Q+ + +N +
Sbjct: 39 LSQIHAVFIKSGQMRDTL--AAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTI 96
Query: 80 LRGLAHSSKPTNAV---LWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLR 136
+RG + S + + L+Y M + T LKACA+ + E QIH L+
Sbjct: 97 IRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALK 156
Query: 137 HGFLADA---------------------------------------------LLGTTLLD 151
+GF D +L ++D
Sbjct: 157 YGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMID 216
Query: 152 VYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEV 211
Y ++G+ +A+ +FD+M R + SWN +I+G + +AV++F+ MK +G +PN V
Sbjct: 217 GYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK-KGDIRPNYV 275
Query: 212 TVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNI 271
T++ L A LG+ + G+ +H Y + + ++ V+ +A+IDMY+KCG+++KA VF+ +
Sbjct: 276 TLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 272 KCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDG 331
R++++TW+ M+ FA+HG A++ F +M +AGV+P DV+Y+ L AC+H GLV++G
Sbjct: 336 P-RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEG 394
Query: 332 VRLFNSMANC-GVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQ 390
R F+ M + G++P ++HYG +VDLLGR+G L EA + + ++ + D V+W+ LLGAC+
Sbjct: 395 RRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACR 454
Query: 391 LYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGF 450
+ G+VEM + + L++M ++ G +V LSN+YA+ W +V +R MK +D++K PG
Sbjct: 455 MQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGC 514
Query: 451 SYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENA 510
S I++ GV+H+F D SH K +EI L EI K++ GY T+ VL ++ EE+KEN
Sbjct: 515 SLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENV 574
Query: 511 LCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHR 570
L YHSEK+A AFGLISTS I++ KNLRIC DCH IKLISKVY R+I VRDR RFH
Sbjct: 575 LHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHH 634
Query: 571 FKDGACSCKDYW 582
F+DG+CSC DYW
Sbjct: 635 FQDGSCSCMDYW 646
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/574 (39%), Positives = 344/574 (59%), Gaps = 10/574 (1%)
Query: 16 AVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPL-NELAYAHALFRQINAPSTN 74
+ +H++Q+ A L T ++ V + ALS + ++ Y+ +F Q P+ +
Sbjct: 21 STGKLHLRQIHALLLRTSLIRNS--DVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLS 78
Query: 75 DFNAVLRGLAHSSKPTNAVLWYRQMLRGSH-RSDALTCSFALKACARVLALFETLQIHSH 133
N ++R + S P +R + R S ++ L+ SFALK C + L LQIH
Sbjct: 79 HCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGK 138
Query: 134 VLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEA 193
+ GFL+D+LL TTL+D+Y+ A KVFDE+ RD SWN L + + +
Sbjct: 139 IFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDV 198
Query: 194 VDLFKRMK--MEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAV 251
+ LF +MK ++G KP+ VT L AL AC +LGA G ++H++I E L + + N +
Sbjct: 199 LVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTL 258
Query: 252 IDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPD 311
+ MY++CG +DKA++VF ++ +++V+W ++ A++G G A+E F +M + G+ P+
Sbjct: 259 VSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPE 317
Query: 312 DVSYLAALCACNHAGLVDDGVRLFNSM--ANCGVKPNMKHYGSVVDLLGRAGRLQEACDI 369
+ + L AC+H+GLV +G+ F+ M +KPN+ HYG VVDLLGRA L +A +
Sbjct: 318 EQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSL 377
Query: 370 VKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERW 429
+KS+ M D +W+TLLGAC+++GDVE+ E L+E+ + GD+VLL N Y+ +W
Sbjct: 378 IKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKW 437
Query: 430 DDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEY 489
+ V +R MK + + PG S IE+ G +H+F D SH + EIY+ L EI ++K
Sbjct: 438 EKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIA 497
Query: 490 GYAAGTSCVLHDI-GEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDV 548
GY A + LH++ EEEK AL YHSEKLA+AFG++ T T+I+V KNLR C DCH+
Sbjct: 498 GYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNF 557
Query: 549 IKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
K +S VY+R +IVRDR RFH FK G+CSC D+W
Sbjct: 558 AKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/603 (37%), Positives = 358/603 (59%), Gaps = 38/603 (6%)
Query: 14 NGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPST 73
+ ++ ++Q+ A L G + + ++ ALS L YA+ + + P+
Sbjct: 14 DSGITFKEVRQIHAKLYVDGTLKDD--HLVGHFVKAVALSDHKYLDYANQILDRSEKPTL 71
Query: 74 NDFNAVLRGLAHSSKPTNAVLWYRQMLRGSH--RSDALTCSFALKACARVLALFETLQIH 131
N+++R S P + +YR++L + + D T +F ++AC + LQ+H
Sbjct: 72 FALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVH 131
Query: 132 SHVLRHGFLADALLGTTLLDVYAKVG-------------------------------EIV 160
+R GF D + T L+ +YA++G ++V
Sbjct: 132 GMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVV 191
Query: 161 SAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAAC 220
A+K+F+ M RD +WNA+I+G AQ + EA+++F M++EGV K N V ++ L+AC
Sbjct: 192 FARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV-KVNGVAMISVLSAC 250
Query: 221 GHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTW 280
LGA +G H YI ++ + V + ++D+YAKCG ++KA EVF ++ K++ TW
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME-EKNVYTW 309
Query: 281 NTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMAN 340
++ + A++G G + LELF M + GV P+ V++++ L C+ G VD+G R F+SM N
Sbjct: 310 SSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRN 369
Query: 341 -CGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAE 399
G++P ++HYG +VDL RAGRL++A I++ + M +W +LL A ++Y ++E+
Sbjct: 370 EFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGV 429
Query: 400 IASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVI 459
+AS+K++E+ + N G +VLLSN+YA WD+V VR++MK++ V+K PG S +EV G +
Sbjct: 430 LASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEV 489
Query: 460 HKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLA 519
H+FF DKSH K+ +I +I +++ GY A T+ V+ DI EEEKE+ALC HSEK A
Sbjct: 490 HEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAA 549
Query: 520 VAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCK 579
+AFG++S E I++ KNLR+C DCH V +ISK++NREIIVRDR RFH FKDG CSC
Sbjct: 550 IAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCN 609
Query: 580 DYW 582
+W
Sbjct: 610 GFW 612
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/525 (40%), Positives = 332/525 (63%), Gaps = 5/525 (0%)
Query: 61 AHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACAR 120
A LF +I +NA++ G A + A+ ++ M++ + R D T + ACA+
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 121 VLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNAL 180
++ Q+H + HGF ++ + L+D+Y+K GE+ +A +F+ + +D+ SWN L
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 181 IAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYI--RE 238
I G NL EA+ LF+ M G PN+VT+L L AC HLGA G IH YI R
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGE-TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 239 ERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALE 298
+ + + ++IDMYAKCG ++ A +VF++I KSL +WN M+ FA+HG + +
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRADASFD 456
Query: 299 LFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMA-NCGVKPNMKHYGSVVDLL 357
LF +M + G++PDD++++ L AC+H+G++D G +F +M + + P ++HYG ++DLL
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Query: 358 GRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFV 417
G +G +EA +++ + M D V+W +LL AC+++G+VE+ E + L+++ N G +V
Sbjct: 517 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 576
Query: 418 LLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYE 477
LLSN+YA+ RW++V + R + ++ +KKVPG S IE+ V+H+F DK H + REIY
Sbjct: 577 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYG 636
Query: 478 KLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFK 537
L+E+ +++ G+ TS VL ++ EE KE AL +HSEKLA+AFGLIST T + + K
Sbjct: 637 MLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVK 696
Query: 538 NLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
NLR+CR+CH+ KLISK+Y REII RDR RFH F+DG CSC DYW
Sbjct: 697 NLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/422 (30%), Positives = 216/422 (51%), Gaps = 44/422 (10%)
Query: 6 ALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNE-LAYAHAL 64
+LL C + ++ IH + ++ L T SKL IEF LSP E L YA ++
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKL-------IEFCILSPHFEGLPYAISV 90
Query: 65 FRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLAL 124
F+ I P+ +N + RG A SS P +A+ Y M+ ++ T F LK+CA+ A
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 125 FETLQIHSHVLRHGFLADALLGTTLLDV-------------------------------Y 153
E QIH HVL+ G D + T+L+ + Y
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 154 AKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTV 213
A G I +A+K+FDE+ V+D+ SWNA+I+G A+ EA++LFK M M+ +P+E T+
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRPDESTM 269
Query: 214 LGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKC 273
+ ++AC G+ + G ++H +I + N+ + NA+ID+Y+KCG L+ A +F+ +
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP- 328
Query: 274 RKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDG-- 331
K +++WNT++ + AL LF++M R+G P+DV+ L+ L AC H G +D G
Sbjct: 329 YKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRW 388
Query: 332 VRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQL 391
+ ++ GV S++D+ + G ++ A + S+ + + W ++ +
Sbjct: 389 IHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAM 447
Query: 392 YG 393
+G
Sbjct: 448 HG 449
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 136/270 (50%), Gaps = 6/270 (2%)
Query: 26 QAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRGLAH 85
Q HL + + +I+ Y S EL A LF ++ +N ++ G H
Sbjct: 287 QVHLWIDDHGFGSNLKIVNALIDLY--SKCGELETACGLFERLPYKDVISWNTLIGGYTH 344
Query: 86 SSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRH--GFLADA 143
+ A+L +++MLR + +T L ACA + A+ IH ++ + G +
Sbjct: 345 MNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNAS 404
Query: 144 LLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKME 203
L T+L+D+YAK G+I +A +VF+ + + ++SWNA+I G A A + DLF RM+
Sbjct: 405 SLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKI 464
Query: 204 GVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREE-RLDMNVVVCNAVIDMYAKCGLLD 262
G+ +P+++T +G L+AC H G G I + ++ ++ + +ID+ GL
Sbjct: 465 GI-QPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFK 523
Query: 263 KAFEVFDNIKCRKSLVTWNTMVMAFAVHGD 292
+A E+ + ++ V W +++ A +HG+
Sbjct: 524 EAEEMINMMEMEPDGVIWCSLLKACKMHGN 553
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 261 LDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALC 320
L A VF I+ +L+ WNTM A+ D AL+L+ M G+ P+ ++ L
Sbjct: 84 LPYAISVFKTIQ-EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLK 142
Query: 321 ACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMV 380
+C + +G ++ + G ++ + S++ + + GRL++A + S D+V
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK-SPHRDVV 201
Query: 381 LWQTLLGACQLYGDVEMAE 399
+ L+ G +E A+
Sbjct: 202 SYTALIKGYASRGYIENAQ 220
>sp|Q0WQW5|PPR85_ARATH Pentatricopeptide repeat-containing protein At1g59720,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2
SV=2
Length = 638
Score = 420 bits (1079), Expect = e-116, Method: Compositional matrix adjust.
Identities = 235/595 (39%), Positives = 355/595 (59%), Gaps = 27/595 (4%)
Query: 6 ALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALF 65
+L + CS + +H L+ TT + + LF + KI++ S +++ YA +F
Sbjct: 53 SLAETCSDMSQLKQLHAFTLR---TTYPEEPATLF-LYGKILQLS--SSFSDVNYAFRVF 106
Query: 66 RQINAPSTNDFNAVLRGLAHS-SKPTNAVLWYRQML-RGSHRSDALTCSFALKACARVLA 123
I S+ +N ++R AH S+ A + YR+ML RG D T F LKACA +
Sbjct: 107 DSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 166
Query: 124 LFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAG 183
E Q+H +++HGF D + L+ +Y G + A+KVFDEM R + SWN++I
Sbjct: 167 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 226
Query: 184 LAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYI-REERLD 242
L + A+ LF+ M+ F+P+ T+ L+AC LG+ G H ++ R+ +D
Sbjct: 227 LVRFGEYDSALQLFREMQRS--FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVD 284
Query: 243 --MNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELF 300
M+V+V N++I+MY KCG L A +VF ++ ++ L +WN M++ FA HG A+ F
Sbjct: 285 VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFATHGRAEEAMNFF 343
Query: 301 EQM--GRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMA-NCGVKPNMKHYGSVVDLL 357
++M R V+P+ V+++ L ACNH G V+ G + F+ M + ++P ++HYG +VDL+
Sbjct: 344 DRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLI 403
Query: 358 GRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYG-DVEMAEIASRKLV------EMGS 410
RAG + EA D+V S+ M D V+W++LL AC G VE++E +R ++ E +
Sbjct: 404 ARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSN 463
Query: 411 NNC-GDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSH 469
NC G +VLLS +YA+ RW+DVG VRK M ++K PG S IE+ G+ H+FF D SH
Sbjct: 464 GNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSH 523
Query: 470 VKWREIYEKLDEIMFKIKEYGYAAGTS--CVLHDIGEEEKENALCYHSEKLAVAFGLIST 527
+ ++IY++L I +++ GY S ++ + KE +L HSE+LA+AFGLI+
Sbjct: 524 PQTKQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINL 583
Query: 528 SEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
T I++FKNLR+C DCH+V KLISKV+N EIIVRDRVRFH FKDG+CSC DYW
Sbjct: 584 PPQTPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 215/579 (37%), Positives = 351/579 (60%), Gaps = 13/579 (2%)
Query: 7 LLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPL-NELAYAHALF 65
L+ KC+S + I +++H+ +K+I F SP + ++YA LF
Sbjct: 35 LISKCNSLRELMQIQAYAIKSHIEDVS--------FVAKLINFCTESPTESSMSYARHLF 86
Query: 66 RQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALF 125
++ P FN++ RG + + P + ++L D T LKACA AL
Sbjct: 87 EAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALE 146
Query: 126 ETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLA 185
E Q+H ++ G + + TL+++Y + ++ SA+ VFD + + +NA+I G A
Sbjct: 147 EGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYA 206
Query: 186 QGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNV 245
+ N +EA+ LF+ M+ + KPNE+T+L L++C LG+ G IH+Y ++ V
Sbjct: 207 RRNRPNEALSLFREMQGK-YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYV 265
Query: 246 VVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGR 305
V A+IDM+AKCG LD A +F+ ++ K W+ M++A+A HG +++ +FE+M
Sbjct: 266 KVNTALIDMFAKCGSLDDAVSIFEKMR-YKDTQAWSAMIVAYANHGKAEKSMLMFERMRS 324
Query: 306 AGVKPDDVSYLAALCACNHAGLVDDGVRLFNSM-ANCGVKPNMKHYGSVVDLLGRAGRLQ 364
V+PD++++L L AC+H G V++G + F+ M + G+ P++KHYGS+VDLL RAG L+
Sbjct: 325 ENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLE 384
Query: 365 EACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYA 424
+A + + + + +LW+ LL AC + ++++AE S ++ E+ ++ GD+V+LSNLYA
Sbjct: 385 DAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYA 444
Query: 425 AYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMF 484
++W+ V +RK MK+R KVPG S IEV V+H+FF+ D +++ LDE++
Sbjct: 445 RNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVK 504
Query: 485 KIKEYGYAAGTSCVLH-DIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICR 543
++K GY TS V+H ++ ++EKE L YHSEKLA+ FGL++T T+I+V KNLR+CR
Sbjct: 505 ELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCR 564
Query: 544 DCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
DCH+ KLIS ++ R++++RD RFH F+DG CSC D+W
Sbjct: 565 DCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/582 (37%), Positives = 355/582 (60%), Gaps = 13/582 (2%)
Query: 4 LNALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHA 63
L+ LL+ SS +K++ A + TG F K + ++++E L + ++ YA
Sbjct: 13 LSELLRASSSKPK----QLKKIHAIVLRTG-FSEK-NSLLTQLLE--NLVVIGDMCYARQ 64
Query: 64 LFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLA 123
+F +++ P +N + +G + P ++L Y++M R D T F +KA +++
Sbjct: 65 VFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGD 124
Query: 124 LFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAG 183
+H+HV+++GF ++ T L+ +Y K GE+ SA+ +F+ M V+D+ +WNA +A
Sbjct: 125 FSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAV 184
Query: 184 LAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDM 243
Q ++ A++ F +M + V + + TV+ L+ACG LG+ + G++I++ R+E +D
Sbjct: 185 CVQTGNSAIALEYFNKMCADAV-QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC 243
Query: 244 NVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQM 303
N++V NA +DM+ KCG + A +F+ +K ++++V+W+TM++ +A++GD AL LF M
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMK-QRNVVSWSTMIVGYAMNGDSREALTLFTTM 302
Query: 304 GRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCG---VKPNMKHYGSVVDLLGRA 360
G++P+ V++L L AC+HAGLV++G R F+ M ++P +HY +VDLLGR+
Sbjct: 303 QNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRS 362
Query: 361 GRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLS 420
G L+EA + +K + + D +W LLGAC ++ D+ + + + LVE + VLLS
Sbjct: 363 GLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLS 422
Query: 421 NLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLD 480
N+YAA +WD V +VR M+ KKV +S +E G IH F DKSH + + IYEKLD
Sbjct: 423 NIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLD 482
Query: 481 EIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLR 540
EI+ KI++ GY T V HD+ EEKE +L +HSEKLA+AFGLI I+V KNLR
Sbjct: 483 EILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLR 542
Query: 541 ICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
C DCH K +S + + EII+RD+ RFH F++G CSCK++W
Sbjct: 543 TCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/565 (38%), Positives = 341/565 (60%), Gaps = 11/565 (1%)
Query: 24 QLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRGL 83
++ H+ G Q +K+I Y S L + YA +F + + +NA+ R L
Sbjct: 98 RVHRHILDNGSDQDPFLA--TKLIGMY--SDLGSVDYARKVFDKTRKRTIYVWNALFRAL 153
Query: 84 AHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACA----RVLALFETLQIHSHVLRHGF 139
+ + Y +M R SD T ++ LKAC V L + +IH+H+ R G+
Sbjct: 154 TLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGY 213
Query: 140 LADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKR 199
+ + TTL+D+YA+ G + A VF M VR++ SW+A+IA A+ A EA+ F+
Sbjct: 214 SSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFRE 273
Query: 200 MKMEGV-FKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKC 258
M E PN VT++ L AC L A ++G IH YI LD + V +A++ MY +C
Sbjct: 274 MMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRC 333
Query: 259 GLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAA 318
G L+ VFD + R +V+WN+++ ++ VHG G +A+++FE+M G P V++++
Sbjct: 334 GKLEVGQRVFDRMHDR-DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392
Query: 319 LCACNHAGLVDDGVRLFNSM-ANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGT 377
L AC+H GLV++G RLF +M + G+KP ++HY +VDLLGRA RL EA +V+ +
Sbjct: 393 LGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEP 452
Query: 378 DMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRK 437
+W +LLG+C+++G+VE+AE ASR+L + N G++VLL+++YA + WD+V RV+K
Sbjct: 453 GPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKK 512
Query: 438 AMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSC 497
+++R ++K+PG ++EV ++ F + D+ + +I+ L ++ +KE GY T
Sbjct: 513 LLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKG 572
Query: 498 VLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYN 557
VL+++ EEKE + HSEKLA+AFGLI+TS+ I++ KNLR+C DCH K ISK
Sbjct: 573 VLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFME 632
Query: 558 REIIVRDRVRFHRFKDGACSCKDYW 582
+EI+VRD RFHRFK+G CSC DYW
Sbjct: 633 KEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 163/363 (44%), Gaps = 30/363 (8%)
Query: 47 IEFYALSPLNELAYAHALFRQINAPSTND-------FNAVLRGLAHSSKPTNAVLWYRQM 99
+ F SPL + + AL N PS + N +++ L K A+ ++
Sbjct: 17 VNFLPRSPLKPPSCSVAL----NNPSISSGAGAKISNNQLIQSLCKEGKLKQAI----RV 68
Query: 100 LRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEI 159
L T + C +L + L++H H+L +G D L T L+ +Y+ +G +
Sbjct: 69 LSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSV 128
Query: 160 VSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAA 219
A+KVFD+ R I WNAL L E + L+ +M GV + + T L A
Sbjct: 129 DYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGV-ESDRFTYTYVLKA 187
Query: 220 C-------GHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIK 272
C HL +G +IH ++ +V + ++DMYA+ G +D A VF +
Sbjct: 188 CVASECTVNHL---MKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP 244
Query: 273 CRKSLVTWNTMVMAFAVHGDGPRALELFEQMGR--AGVKPDDVSYLAALCACNHAGLVDD 330
R ++V+W+ M+ +A +G AL F +M R P+ V+ ++ L AC ++
Sbjct: 245 VR-NVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQ 303
Query: 331 GVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQ 390
G + + G+ + ++V + GR G+L+ + + D+V W +L+ +
Sbjct: 304 GKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH-DRDVVSWNSLISSYG 362
Query: 391 LYG 393
++G
Sbjct: 363 VHG 365
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 210/554 (37%), Positives = 334/554 (60%), Gaps = 14/554 (2%)
Query: 35 FQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVL 94
+S+LF V +K+I+ YA L +F ++ +N++++ + +P A+
Sbjct: 278 LESELF-VSNKLIDLYA--EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 95 WYRQMLRGSHRSDALTCSFALKACARVLALFETLQ----IHSHVLRHG-FLADALLGTTL 149
+++M + D LT L + A +L+ ++ + LR G FL D +G +
Sbjct: 335 LFQEMRLSRIQPDCLT----LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 150 LDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPN 209
+ +YAK+G + SA+ VF+ + D+ SWN +I+G AQ ASEA++++ M+ EG N
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 210 EVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFD 269
+ T + L AC GA ++G K+H + + L ++V V ++ DMY KCG L+ A +F
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFY 510
Query: 270 NIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVD 329
I R + V WNT++ HG G +A+ LF++M GVKPD ++++ L AC+H+GLVD
Sbjct: 511 QIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 330 DGVRLFNSM-ANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGA 388
+G F M + G+ P++KHYG +VD+ GRAG+L+ A +KS+S+ D +W LL A
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 389 CQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVP 448
C+++G+V++ +IAS L E+ + G VLLSN+YA+ +W+ V +R + ++K P
Sbjct: 630 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 689
Query: 449 GFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKE 508
G+S +EV + F+T +++H + E+Y +L + K+K GY VL D+ ++EKE
Sbjct: 690 GWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKE 749
Query: 509 NALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRF 568
+ L HSE+LA+AF LI+T T+I++FKNLR+C DCH V K ISK+ REIIVRD RF
Sbjct: 750 HILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRF 809
Query: 569 HRFKDGACSCKDYW 582
H FK+G CSC DYW
Sbjct: 810 HHFKNGVCSCGDYW 823
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 184/370 (49%), Gaps = 11/370 (2%)
Query: 42 VRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLR 101
V + +I Y S + A LF ++ +NA++ G S A+ +
Sbjct: 187 VAASLIHLY--SRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL----TLSN 240
Query: 102 GSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVS 161
G D++T L AC + IHS+ ++HG ++ + L+D+YA+ G +
Sbjct: 241 GLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRD 300
Query: 162 AKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACG 221
+KVFD M VRD+ SWN++I A+ LF+ M++ + +P+ +T++ +
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRI-QPDCLTLISLASILS 359
Query: 222 HLGAWKEGDKIHEY-IREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTW 280
LG + + + +R+ ++ + NAV+ MYAK GL+D A VF+ + +++W
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP-NTDVISW 418
Query: 281 NTMVMAFAVHGDGPRALELFEQMGRAG-VKPDDVSYLAALCACNHAGLVDDGVRLFNSMA 339
NT++ +A +G A+E++ M G + + ++++ L AC+ AG + G++L +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 340 NCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAE 399
G+ ++ S+ D+ G+ GRL++A + + + V W TL+ +G E A
Sbjct: 479 KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR-VNSVPWNTLIACHGFHGHGEKAV 537
Query: 400 IASRKLVEMG 409
+ +++++ G
Sbjct: 538 MLFKEMLDEG 547
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 163/332 (49%), Gaps = 30/332 (9%)
Query: 2 ANLNALLQKCSSNG----AVSHIHI-----------KQLQAHLTTTGQFQSKLFPVRSKI 46
A+ NAL Q C NG + +H K L A L + Q Q+ + +K+
Sbjct: 36 ASANAL-QDCWKNGNESKEIDDVHTLFRYCTNLQSAKCLHARLVVSKQIQN--VCISAKL 92
Query: 47 IEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQ-MLRGSHR 105
+ Y L +A A F I +N ++ G + + + + ML
Sbjct: 93 VNLYCY--LGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLT 150
Query: 106 SDALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKV 165
D T LKAC V+ + +IH L+ GF+ D + +L+ +Y++ + +A+ +
Sbjct: 151 PDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARIL 207
Query: 166 FDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGA 225
FDEM VRD+ SWNA+I+G Q A EA+ L G+ + VTV+ L+AC G
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGD 262
Query: 226 WKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVM 285
+ G IH Y + L+ + V N +ID+YA+ G L +VFD + R L++WN+++
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR-DLISWNSIIK 321
Query: 286 AFAVHGDGPRALELFEQMGRAGVKPDDVSYLA 317
A+ ++ RA+ LF++M + ++PD ++ ++
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 220/610 (36%), Positives = 343/610 (56%), Gaps = 45/610 (7%)
Query: 8 LQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKL--FPVRSKIIEFYALSPLNELAYAHALF 65
LQ+CS + IH + L+ L +K F + S +F L YA +F
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDF--------LPYAQIVF 72
Query: 66 RQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALF 125
+ P T +N ++RG + S +P ++L Y++ML S +A T LKAC+ + A
Sbjct: 73 DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132
Query: 126 ETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEM---------------- 169
ET QIH+ + + G+ D +L++ YA G A +FD +
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192
Query: 170 --GVRDIA-------------SWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVL 214
G DIA SW +I+G Q ++ EA+ LF M+ V +P+ V++
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDV-EPDNVSLA 251
Query: 215 GALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCR 274
AL+AC LGA ++G IH Y+ + R+ M+ V+ +IDMYAKCG +++A EVF NIK +
Sbjct: 252 NALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-K 310
Query: 275 KSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRL 334
KS+ W ++ +A HG G A+ F +M + G+KP+ +++ A L AC++ GLV++G +
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 335 FNSMA-NCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYG 393
F SM + +KP ++HYG +VDLLGRAG L EA ++ + + + V+W LL AC+++
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 394 DVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYI 453
++E+ E L+ + + G +V +N++A ++WD R+ MK + V KVPG S I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 454 EVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHD-IGEEEKENALC 512
+ G H+F D+SH + +I K + K++E GY +L D + ++E+E +
Sbjct: 491 SLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVH 550
Query: 513 YHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFK 572
HSEKLA+ +GLI T T I++ KNLR+C+DCH V KLISK+Y R+I++RDR RFH F+
Sbjct: 551 QHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFR 610
Query: 573 DGACSCKDYW 582
DG CSC DYW
Sbjct: 611 DGKCSCGDYW 620
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/508 (39%), Positives = 311/508 (61%), Gaps = 3/508 (0%)
Query: 76 FNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVL 135
+NA++ G S + + M + RSD T + K C + A+ + Q+H++ +
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 136 RHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVD 195
+ G+ D + + +LD+Y K G++ +A+ FD + V D +W +I+G + A
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFH 604
Query: 196 LFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMY 255
+F +M++ GV P+E T+ A L A ++G +IH + + V +++DMY
Sbjct: 605 VFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMY 663
Query: 256 AKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSY 315
AKCG +D A+ +F I+ ++ WN M++ A HG+G L+LF+QM G+KPD V++
Sbjct: 664 AKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTF 722
Query: 316 LAALCACNHAGLVDDGVRLFNSM-ANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVS 374
+ L AC+H+GLV + + SM + G+KP ++HY + D LGRAG +++A ++++S+S
Sbjct: 723 IGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
Query: 375 MGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGR 434
M +++TLL AC++ GD E + + KL+E+ + +VLLSN+YAA +WD++
Sbjct: 783 MEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKL 842
Query: 435 VRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAG 494
R MK VKK PGFS+IEV IH F D+S+ + IY K+ +++ IK+ GY
Sbjct: 843 ARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPE 902
Query: 495 TSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISK 554
T L D+ EEEKE AL YHSEKLAVAFGL+ST +T I+V KNLR+C DCH+ +K I+K
Sbjct: 903 TDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAK 962
Query: 555 VYNREIIVRDRVRFHRFKDGACSCKDYW 582
VYNREI++RD RFHRFKDG CSC DYW
Sbjct: 963 VYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 180/361 (49%), Gaps = 15/361 (4%)
Query: 39 LFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQ 98
+ V + +I Y L + +A +F ++ +N+V+ G+A + AV + Q
Sbjct: 349 MLTVSNSLINMYC--KLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 99 MLRGSHRSDALTCSFALKACARVL-ALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVG 157
+LR + D T + LKA + + L + Q+H H ++ ++D+ + T L+D Y++
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 158 EIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGAL 217
+ A+ +F+ D+ +WNA++AG Q + + + LF M +G + ++ T+
Sbjct: 467 CMKEAEILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE-RSDDFTLATVF 524
Query: 218 AACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSL 277
CG L A +G ++H Y + D+++ V + ++DMY KCG + A FD+I
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDD- 583
Query: 278 VTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDD--VSYLAALCACNHAGLVDDGVRLF 335
V W TM+ +G+ RA +F QM GV PD+ ++ LA +C A ++ G ++
Sbjct: 584 VAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA--LEQGRQIH 641
Query: 336 -NSMA-NCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYG 393
N++ NC P + S+VD+ + G + +A + K + M ++ W +L +G
Sbjct: 642 ANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHG 698
Query: 394 D 394
+
Sbjct: 699 E 699
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 149/326 (45%), Gaps = 11/326 (3%)
Query: 77 NAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLR 136
N L HS + + + + M+ D +T L +V +L Q+H L+
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 137 HGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDL 196
G + +L+++Y K+ + A+ VFD M RD+ SWN++IAG+AQ L EAV L
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 197 FKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVV----VCNAVI 252
F ++ G+ KP++ T+ L A L EG + + + + +N V V A+I
Sbjct: 404 FMQLLRCGL-KPDQYTMTSVLKAASSL---PEGLSLSKQVHVHAIKINNVSDSFVSTALI 459
Query: 253 DMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDD 312
D Y++ + +A +F+ + LV WN M+ + DG + L+LF M + G + DD
Sbjct: 460 DAYSRNRCMKEAEILFE--RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD 517
Query: 313 VSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKS 372
+ C ++ G ++ G ++ ++D+ + G + A S
Sbjct: 518 FTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 373 VSMGTDMVLWQTLLGACQLYGDVEMA 398
+ + D V W T++ C G+ E A
Sbjct: 578 IPVPDD-VAWTTMISGCIENGEEERA 602
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 135/274 (49%), Gaps = 12/274 (4%)
Query: 23 KQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRG 82
KQ+ A+ +G + L+ V S I++ Y +++ A F I P + ++ G
Sbjct: 537 KQVHAYAIKSG-YDLDLW-VSSGILDMYV--KCGDMSAAQFAFDSIPVPDDVAWTTMISG 592
Query: 83 LAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLAD 142
+ + A + QM D T + KA + + AL + QIH++ L+ D
Sbjct: 593 CIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTND 652
Query: 143 ALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKM 202
+GT+L+D+YAK G I A +F + + +I +WNA++ GLAQ E + LFK+MK
Sbjct: 653 PFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 203 EGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVV----CNAVIDMYAKC 258
G+ KP++VT +G L+AC H G E ++++R D + + + D +
Sbjct: 713 LGI-KPDKVTFIGVLSACSHSGLVSEA---YKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 259 GLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGD 292
GL+ +A + +++ S + T++ A V GD
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGD 802
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 97/189 (51%), Gaps = 7/189 (3%)
Query: 131 HSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLA 190
H+ +L + L L+ +Y+K G + A++VFD+M RD+ SWN+++A AQ +
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 191 -----SEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNV 245
+A LF+ ++ + V+ + +T+ L C H G + H Y + LD +
Sbjct: 122 VVENIQQAFLLFRILRQDVVY-TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDE 180
Query: 246 VVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGR 305
V A++++Y K G + + +F+ + R +V WN M+ A+ G A++L
Sbjct: 181 FVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKAYLEMGFKEEAIDLSSAFHS 239
Query: 306 AGVKPDDVS 314
+G+ P++++
Sbjct: 240 SGLNPNEIT 248
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 148/373 (39%), Gaps = 54/373 (14%)
Query: 44 SKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRGLAHSSK-----PTNAVLWYRQ 98
+ +I Y S L YA +F ++ +N++L A SS+ A L +R
Sbjct: 78 NNLISMY--SKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 99 MLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGE 158
+ + + +T S LK C ++ + H + + G D + L+++Y K G+
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGK 195
Query: 159 IVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVT------ 212
+ K +F+EM RD+ WN ++ + EA+DL G+ PNE+T
Sbjct: 196 VKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGL-NPNEITLRLLAR 254
Query: 213 VLGALAACGHLGAWKEGDK-------------IHEYIREERL--------DM--NVVVCN 249
+ G + G + ++ G+ + EY+ + DM + V C+
Sbjct: 255 ISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECD 314
Query: 250 AV--IDMYAKCGLLDKAFEVFDNIKCRK-------SLVTWNTMVMAFAVHGDGPRALELF 300
V I M A +D + + + C L N+++ + A +F
Sbjct: 315 QVTFILMLATAVKVD-SLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 301 EQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRA 360
+ M + D +S+ + + GL + V LF + CG+KP+ SV L A
Sbjct: 374 DNMS----ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV---LKAA 426
Query: 361 GRLQEACDIVKSV 373
L E + K V
Sbjct: 427 SSLPEGLSLSKQV 439
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/559 (37%), Positives = 327/559 (58%), Gaps = 34/559 (6%)
Query: 57 ELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALK 116
+L A +F I +N+++ G P A+ +++M ++ +T L
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240
Query: 117 ACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFD--------- 167
ACA++ L Q+ S++ + + L +LD+Y K G I AK++FD
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300
Query: 168 ----------------------EMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGV 205
M +DI +WNALI+ Q +EA+ +F ++++
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360
Query: 206 FKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAF 265
K N++T++ L+AC +GA + G IH YI++ + MN V +A+I MY+KCG L+K+
Sbjct: 361 MKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSR 420
Query: 266 EVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHA 325
EVF++++ R V W+ M+ A+HG G A+++F +M A VKP+ V++ CAC+H
Sbjct: 421 EVFNSVEKRDVFV-WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 479
Query: 326 GLVDDGVRLFNSM-ANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQT 384
GLVD+ LF+ M +N G+ P KHY +VD+LGR+G L++A ++++ + +W
Sbjct: 480 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGA 539
Query: 385 LLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDV 444
LLGAC+++ ++ +AE+A +L+E+ N G VLLSN+YA +W++V +RK M+ +
Sbjct: 540 LLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL 599
Query: 445 KKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGE 504
KK PG S IE+ G+IH+F + D +H ++Y KL E+M K+K GY S VL I E
Sbjct: 600 KKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEE 659
Query: 505 EE-KENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVR 563
EE KE +L HSEKLA+ +GLIST I+V KNLR+C DCH V KLIS++Y+REIIVR
Sbjct: 660 EEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVR 719
Query: 564 DRVRFHRFKDGACSCKDYW 582
DR RFH F++G CSC D+W
Sbjct: 720 DRYRFHHFRNGQCSCNDFW 738
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 205/420 (48%), Gaps = 41/420 (9%)
Query: 6 ALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALF 65
+L+++C VS +KQ H+ TG F SK+ ALS L YA +F
Sbjct: 35 SLIERC-----VSLRQLKQTHGHMIRTGTFSDPY--SASKLFAMAALSSFASLEYARKVF 87
Query: 66 RQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSH-RSDALTCSFALKACARVLAL 124
+I P++ +N ++R A P ++ + M+ S + T F +KA A V +L
Sbjct: 88 DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSL 147
Query: 125 FETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGL 184
+H ++ +D + +L+ Y G++ SA KVF + +D+ SWN++I G
Sbjct: 148 SLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207
Query: 185 AQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMN 244
Q +A++LFK+M+ E V K + VT++G L+AC + + G ++ YI E R+++N
Sbjct: 208 VQKGSPDKALELFKKMESEDV-KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266
Query: 245 VVVCNAVIDMYAKCGLLDKAFEVFD------------------------------NIKCR 274
+ + NA++DMY KCG ++ A +FD N +
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 275 KSLVTWNTMVMAFAVHGDGPRALELFEQMG-RAGVKPDDVSYLAALCACNHAGLVDDGVR 333
K +V WN ++ A+ +G AL +F ++ + +K + ++ ++ L AC G ++ G
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 334 LFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYG 393
+ + + G++ N +++ + + G L+++ ++ SV D+ +W ++G ++G
Sbjct: 387 IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG 445
Score = 115 bits (288), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 148/311 (47%), Gaps = 10/311 (3%)
Query: 120 RVLALFETLQIHSHVLRHGFLADALLGTTLLDVYA--KVGEIVSAKKVFDEMGVRDIASW 177
R ++L + Q H H++R G +D + L + A + A+KVFDE+ + +W
Sbjct: 39 RCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAW 98
Query: 178 NALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIR 237
N LI A G ++ F M E PN+ T + A + + G +H
Sbjct: 99 NTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAV 158
Query: 238 EERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRAL 297
+ + +V V N++I Y CG LD A +VF IK K +V+WN+M+ F G +AL
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK-EKDVVSWNSMINGFVQKGSPDKAL 217
Query: 298 ELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLL 357
ELF++M VK V+ + L AC ++ G ++ + + V N+ +++D+
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 358 GRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFV 417
+ G +++A + ++ D V W T+L + D E A+R++ + S D V
Sbjct: 278 TKCGSIEDAKRLFDAME-EKDNVTWTTMLDGYAISEDYE----AAREV--LNSMPQKDIV 330
Query: 418 LLSNLYAAYER 428
+ L +AYE+
Sbjct: 331 AWNALISAYEQ 341
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/568 (38%), Positives = 336/568 (59%), Gaps = 14/568 (2%)
Query: 21 HIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALS-PLNELAYAHALFRQINAPSTNDFNAV 79
++Q+ AHL TG +S RS + + L+ +AY H LF + P FN+V
Sbjct: 24 QLQQVHAHLIVTGYGRS-----RSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSV 78
Query: 80 LRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGF 139
++ + P + V +YR+ML + T + +K+CA + AL +H H + GF
Sbjct: 79 IKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGF 138
Query: 140 LADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKR 199
D + L+ Y+K G++ A++VFD M + I +WN+L++G Q LA EA+ +F +
Sbjct: 139 GLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ 198
Query: 200 MKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCG 259
M+ G F+P+ T + L+AC GA G +H+YI E LD+NV + A+I++Y++CG
Sbjct: 199 MRESG-FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCG 257
Query: 260 LLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQM-GRAGVKPDDVSYLAA 318
+ KA EVFD +K ++ W M+ A+ HG G +A+ELF +M G P++V+++A
Sbjct: 258 DVGKAREVFDKMK-ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAV 316
Query: 319 LCACNHAGLVDDGVRLFNSMANC-GVKPNMKHYGSVVDLLGRAGRLQEACDIV---KSVS 374
L AC HAGLV++G ++ M + P ++H+ +VD+LGRAG L EA + +
Sbjct: 317 LSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATG 376
Query: 375 MGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGR 434
T LW +LGAC+++ + ++ +++L+ + +N G V+LSN+YA + D+V
Sbjct: 377 KATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSH 436
Query: 435 VRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAG 494
+R M +++K G+S IEV + F D+SH + EIY L+ ++ + KE GYA
Sbjct: 437 IRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPV 496
Query: 495 TSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISK 554
+ V+H + EEEKE AL YHSEKLAVAFGL+ T + +I + KNLRIC DCH K IS
Sbjct: 497 SEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISI 555
Query: 555 VYNREIIVRDRVRFHRFKDGACSCKDYW 582
V NR+I VRD++RFH F++G+CSC DYW
Sbjct: 556 VSNRQITVRDKLRFHHFQNGSCSCLDYW 583
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/584 (36%), Positives = 348/584 (59%), Gaps = 21/584 (3%)
Query: 16 AVSHIHI----KQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAP 71
A SH+ + K+L A+ G F V S +++ Y ++ +F +
Sbjct: 311 ACSHLEMLRTGKELHAYALKNGSLDENSF-VGSALVDMYC--NCKQVLSGRRVFDGMFDR 367
Query: 72 STNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHR-SDALTCSFALKACARVLALFETLQI 130
+NA++ G + + A+L + M + +++ T + + AC R A I
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 131 HSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLA 190
H V++ G D + TL+D+Y+++G+I A ++F +M RD+ +WN +I G
Sbjct: 428 HGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHH 487
Query: 191 SEAVDLFKRMK------MEGV----FKPNEVTVLGALAACGHLGAWKEGDKIHEYIREER 240
+A+ L +M+ +G KPN +T++ L +C L A +G +IH Y +
Sbjct: 488 EDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN 547
Query: 241 LDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELF 300
L +V V +A++DMYAKCG L + +VFD I +K+++TWN ++MA+ +HG+G A++L
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLL 606
Query: 301 EQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSM-ANCGVKPNMKHYGSVVDLLGR 359
M GVKP++V++++ AC+H+G+VD+G+R+F M + GV+P+ HY VVDLLGR
Sbjct: 607 RMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGR 666
Query: 360 AGRLQEACDIVKSVSMGTDMV-LWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVL 418
AGR++EA ++ + + W +LLGA +++ ++E+ EIA++ L+++ N +VL
Sbjct: 667 AGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVL 726
Query: 419 LSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEK 478
L+N+Y++ WD VR+ MK + V+K PG S+IE G +HKF D SH + ++
Sbjct: 727 LANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGY 786
Query: 479 LDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKN 538
L+ + ++++ GY TSCVLH++ E+EKE LC HSEKLA+AFG+++TS T I+V KN
Sbjct: 787 LETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKN 846
Query: 539 LRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
LR+C DCH K ISK+ +REII+RD RFHRFK+G CSC DYW
Sbjct: 847 LRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 123 bits (309), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 178/370 (48%), Gaps = 14/370 (3%)
Query: 23 KQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRG 82
KQ+ AH+ G + V + ++ Y + + +F +I+ + +N+++
Sbjct: 117 KQIHAHVYKFG-YGVDSVTVANTLVNLY--RKCGDFGAVYKVFDRISERNQVSWNSLISS 173
Query: 83 LAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETL----QIHSHVLRHG 138
L K A+ +R ML + + T + AC+ L + E L Q+H++ LR G
Sbjct: 174 LCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN-LPMPEGLMMGKQVHAYGLRKG 232
Query: 139 FLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFK 198
L ++ + TL+ +Y K+G++ S+K + G RD+ +WN +++ L Q EA++ +
Sbjct: 233 EL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLR 291
Query: 199 RMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEY-IREERLDMNVVVCNAVIDMYAK 257
M +EGV +P+E T+ L AC HL + G ++H Y ++ LD N V +A++DMY
Sbjct: 292 EMVLEGV-EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 350
Query: 258 CGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGR-AGVKPDDVSYL 316
C + VFD + RK + WN M+ ++ + AL LF M AG+ + +
Sbjct: 351 CKQVLSGRRVFDGMFDRK-IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMA 409
Query: 317 AALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMG 376
+ AC +G + + G+ + +++D+ R G++ A I +
Sbjct: 410 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKME-D 468
Query: 377 TDMVLWQTLL 386
D+V W T++
Sbjct: 469 RDLVTWNTMI 478
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 131/261 (50%), Gaps = 9/261 (3%)
Query: 79 VLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHG 138
+LR S+ AVL Y M+ + D LKA A + + QIH+HV + G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 139 FLADAL-LGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLF 197
+ D++ + TL+++Y K G+ + KVFD + R+ SWN+LI+ L A++ F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 198 KRMKMEGVFKPNEVTVLGALAACGHLG---AWKEGDKIHEY-IREERLDMNVVVCNAVID 253
+ M E V +P+ T++ + AC +L G ++H Y +R+ L N + N ++
Sbjct: 188 RCMLDENV-EPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL--NSFIINTLVA 244
Query: 254 MYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDV 313
MY K G L + + + R LVTWNT++ + + ALE +M GV+PD+
Sbjct: 245 MYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 314 SYLAALCACNHAGLVDDGVRL 334
+ + L AC+H ++ G L
Sbjct: 304 TISSVLPACSHLEMLRTGKEL 324
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/508 (39%), Positives = 307/508 (60%), Gaps = 3/508 (0%)
Query: 76 FNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVL 135
+N ++ G A S +A+ R+M + D+ T S L + + + + +IH +V+
Sbjct: 210 YNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVI 269
Query: 136 RHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVD 195
R G +D +G++L+D+YAK I +++VF + RD SWN+L+AG Q +EA+
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 196 LFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMY 255
LF++M V KP V + AC HL G ++H Y+ N+ + +A++DMY
Sbjct: 330 LFRQMVTAKV-KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMY 388
Query: 256 AKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSY 315
+KCG + A ++FD + V+W ++M A+HG G A+ LFE+M R GVKP+ V++
Sbjct: 389 SKCGNIKAARKIFDRMNVLDE-VSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAF 447
Query: 316 LAALCACNHAGLVDDGVRLFNSMANC-GVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVS 374
+A L AC+H GLVD+ FNSM G+ ++HY +V DLLGRAG+L+EA + + +
Sbjct: 448 VAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMC 507
Query: 375 MGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGR 434
+ +W TLL +C ++ ++E+AE + K+ + S N G +VL+ N+YA+ RW ++ +
Sbjct: 508 VEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAK 567
Query: 435 VRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAG 494
+R M+ + ++K P S+IE+ H F + D+SH +I E L +M ++++ GY A
Sbjct: 568 LRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVAD 627
Query: 495 TSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISK 554
TS VLHD+ EE K L HSE+LAVAFG+I+T T+I+V KN+RIC DCH IK ISK
Sbjct: 628 TSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISK 687
Query: 555 VYNREIIVRDRVRFHRFKDGACSCKDYW 582
+ REIIVRD RFH F G CSC DYW
Sbjct: 688 ITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 188/431 (43%), Gaps = 46/431 (10%)
Query: 1 MANLNALLQKCSSNGA--VSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNEL 58
M++ AL++ N S KQL A T QS S +I Y + L L
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRT---QSLSHTSASIVISIY--TNLKLL 55
Query: 59 AYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKAC 118
A LF+ + +P + +V+R S + A+ + +M D LK+C
Sbjct: 56 HEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSC 115
Query: 119 ARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKV---GEIVSAKKVFDEMGVR--- 172
++ L +H ++R G D G L+++YAK+ G +S VFDEM R
Sbjct: 116 TMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSN 175
Query: 173 ------------------------------DIASWNALIAGLAQGNLASEAVDLFKRMKM 202
D+ S+N +IAG AQ + +A+ + + M
Sbjct: 176 SGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGT 235
Query: 203 EGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLD 262
+ KP+ T+ L +G +IH Y+ + +D +V + ++++DMYAK ++
Sbjct: 236 TDL-KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294
Query: 263 KAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCAC 322
+ VF + CR ++WN++V + +G AL LF QM A VKP V++ + + AC
Sbjct: 295 DSERVFSRLYCRDG-ISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPAC 353
Query: 323 NHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLW 382
H + G +L + G N+ ++VD+ + G ++ A I +++ D V W
Sbjct: 354 AHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-LDEVSW 412
Query: 383 QTLLGACQLYG 393
++ L+G
Sbjct: 413 TAIIMGHALHG 423
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 150/355 (42%), Gaps = 44/355 (12%)
Query: 115 LKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDI 174
+K R+ + + Q+H+ +R L+ + ++ +Y + + A +F + +
Sbjct: 12 IKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTLKSPPV 70
Query: 175 ASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHE 234
+W ++I +L S+A+ F M+ G P+ L +C + + G+ +H
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRC-PDHNVFPSVLKSCTMMMDLRFGESVHG 129
Query: 235 YIREERLDMNVVVCNAVIDMYAK-CGLLDK--AFEVFDNIKCRKSL-----VTWNTMVMA 286
+I +D ++ NA+++MYAK G+ K VFD + R S V T +M
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 287 FAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPN 346
F + D R +FE M R D VSY + +G+ +D +R+ M +KP+
Sbjct: 190 FGI--DSVR--RVFEVMPRK----DVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 347 MKHYGSVVDLLGRAGRLQEACDIVKSVS---------MGTDMVLWQTLLGACQLYGDVEM 397
SV+ + E D++K + +D+ + +L+ +E
Sbjct: 242 SFTLSSVLPI------FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIED 295
Query: 398 AEIASRKLVEMGSNNCGDFVLLSNLYAAY---ERWDDVGRVRKAMKNRDVKKVPG 449
+E +L C D + ++L A Y R+++ R+ + M VK PG
Sbjct: 296 SERVFSRLY------CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK--PG 342
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/579 (36%), Positives = 341/579 (58%), Gaps = 12/579 (2%)
Query: 7 LLQKCSSNGAVSHIHIKQ-LQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALF 65
LL+ CS +SH+ + + + A + G F + +F V++ +I YA L A +F
Sbjct: 125 LLKACS---GLSHLQMGRFVHAQVFRLG-FDADVF-VQNGLIALYA--KCRRLGSARTVF 177
Query: 66 RQINAPSTN--DFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLA 123
+ P + A++ A + +P A+ + QM + + D + L A +
Sbjct: 178 EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD 237
Query: 124 LFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAG 183
L + IH+ V++ G + L +L +YAK G++ +AK +FD+M ++ WNA+I+G
Sbjct: 238 LKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISG 297
Query: 184 LAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDM 243
A+ A EA+D+F M + V +P+ +++ A++AC +G+ ++ ++EY+
Sbjct: 298 YAKNGYAREAIDMFHEMINKDV-RPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 244 NVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQM 303
+V + +A+IDM+AKCG ++ A VFD R +V W+ M++ + +HG A+ L+ M
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDR-DVVVWSAMIVGYGLHGRAREAISLYRAM 415
Query: 304 GRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRL 363
R GV P+DV++L L ACNH+G+V +G FN MA+ + P +HY V+DLLGRAG L
Sbjct: 416 ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHL 475
Query: 364 QEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLY 423
+A +++K + + + +W LL AC+ + VE+ E A+++L + +N G +V LSNLY
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLY 535
Query: 424 AAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIM 483
AA WD V VR MK + + K G S++EV G + F DKSH ++ EI +++ I
Sbjct: 536 AAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIE 595
Query: 484 FKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICR 543
++KE G+ A LHD+ +EE E LC HSE++A+A+GLIST + T +++ KNLR C
Sbjct: 596 SRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACV 655
Query: 544 DCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
+CH KLISK+ +REI+VRD RFH FKDG CSC DYW
Sbjct: 656 NCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 206/414 (49%), Gaps = 12/414 (2%)
Query: 14 NGAVSHIHIKQLQAHLTTTG-QFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPS 72
+ A +KQ+ A L G QF L +K+I +A S ++ +A +F + P
Sbjct: 29 DSATHKAQLKQIHARLLVLGLQFSGFLI---TKLI--HASSSFGDITFARQVFDDLPRPQ 83
Query: 73 TNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHS 132
+NA++RG + ++ +A+L Y M D+ T LKAC+ + L +H+
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 133 HVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGV--RDIASWNALIAGLAQGNLA 190
V R GF AD + L+ +YAK + SA+ VF+ + + R I SW A+++ AQ
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 191 SEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNA 250
EA+++F +M+ V KP+ V ++ L A L K+G IH + + L++ + +
Sbjct: 204 MEALEIFSQMRKMDV-KPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLIS 262
Query: 251 VIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKP 310
+ MYAKCG + A +FD +K +L+ WN M+ +A +G A+++F +M V+P
Sbjct: 263 LNTMYAKCGQVATAKILFDKMKS-PNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 311 DDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIV 370
D +S +A+ AC G ++ ++ + + ++ +++D+ + G + E +V
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSV-EGARLV 380
Query: 371 KSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYA 424
++ D+V+W ++ L+G A I+ + +E G + D L L A
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREA-ISLYRAMERGGVHPNDVTFLGLLMA 433
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 400 bits (1029), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/581 (37%), Positives = 337/581 (58%), Gaps = 11/581 (1%)
Query: 5 NALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHAL 64
+ALL C A+ +++ AH+ T + +R++++ FY + L A +
Sbjct: 56 DALLNACLDKRALRDG--QRVHAHMIKTRYLPATY--LRTRLLIFYG--KCDCLEDARKV 109
Query: 65 FRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLAL 124
++ + + A++ + + + A+ + +M+R + + T + L +C R L
Sbjct: 110 LDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGL 169
Query: 125 FETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGL 184
QIH +++ + + +G++LLD+YAK G+I A+++F+ + RD+ S A+IAG
Sbjct: 170 GLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGY 229
Query: 185 AQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMN 244
AQ L EA+++F R+ EG+ PN VT L A L G + H ++ L
Sbjct: 230 AQLGLDEEALEMFHRLHSEGM-SPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFY 288
Query: 245 VVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQM- 303
V+ N++IDMY+KCG L A +FDN+ R + ++WN M++ ++ HG G LELF M
Sbjct: 289 AVLQNSLIDMYSKCGNLSYARRLFDNMPERTA-ISWNAMLVGYSKHGLGREVLELFRLMR 347
Query: 304 GRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSM--ANCGVKPNMKHYGSVVDLLGRAG 361
VKPD V+ LA L C+H + D G+ +F+ M G KP +HYG +VD+LGRAG
Sbjct: 348 DEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAG 407
Query: 362 RLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSN 421
R+ EA + +K + + +LLGAC+++ V++ E R+L+E+ N G++V+LSN
Sbjct: 408 RIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSN 467
Query: 422 LYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDE 481
LYA+ RW DV VR M + V K PG S+I+ +H F +D++H + E+ K+ E
Sbjct: 468 LYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKE 527
Query: 482 IMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRI 541
I K+K+ GY SCVL+D+ EE+KE L HSEKLA+ FGLI+T E I+VFKNLRI
Sbjct: 528 ISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRI 587
Query: 542 CRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
C DCH+ K+ SKV+ RE+ +RD+ RFH+ DG CSC DYW
Sbjct: 588 CVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/584 (36%), Positives = 337/584 (57%), Gaps = 20/584 (3%)
Query: 5 NALLQKCSS-----NGAVSHIHIKQ-LQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNEL 58
N LL+KC+ G + H HI Q + H G + ++ YA L
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMG----------NTLLNMYA--KCGSL 111
Query: 59 AYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKAC 118
A +F ++ + ++ G + +P +A+L++ QMLR + + T S +KA
Sbjct: 112 EEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAA 171
Query: 119 ARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWN 178
A Q+H ++ GF ++ +G+ LLD+Y + G + A+ VFD + R+ SWN
Sbjct: 172 AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231
Query: 179 ALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIRE 238
ALIAG A+ + +A++LF+ M +G F+P+ + AC G ++G +H Y+ +
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRDG-FRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 239 ERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALE 298
+ N ++DMYAK G + A ++FD + ++ +V+WN+++ A+A HG G A+
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL-AKRDVVSWNSLLTAYAQHGFGKEAVW 349
Query: 299 LFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLG 358
FE+M R G++P+++S+L+ L AC+H+GL+D+G + M G+ P HY +VVDLLG
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLG 409
Query: 359 RAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVL 418
RAG L A ++ + + +W+ LL AC+++ + E+ A+ + E+ ++ G V+
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469
Query: 419 LSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEK 478
L N+YA+ RW+D RVRK MK VKK P S++E+ IH F +D+ H + EI K
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK 529
Query: 479 LDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKN 538
+E++ KIKE GY TS V+ + ++E+E L YHSEK+A+AF L++T ++I + KN
Sbjct: 530 WEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKN 589
Query: 539 LRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
+R+C DCH IKL SKV REIIVRD RFH FKDG CSCKDYW
Sbjct: 590 IRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/586 (36%), Positives = 339/586 (57%), Gaps = 14/586 (2%)
Query: 1 MANLNALLQKCSSNGAVS---HIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNE 57
+A + ++ C+ + +S +H ++A + +F + L + SK +
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKC---------GD 346
Query: 58 LAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKA 117
L A A+FR+++ S + +++ G A AV + +M D T + L
Sbjct: 347 LDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 118 CARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASW 177
CAR L E ++H + + D + L+D+YAK G + A+ VF EM V+DI SW
Sbjct: 407 CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISW 466
Query: 178 NALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIR 237
N +I G ++ A+EA+ LF + E F P+E TV L AC L A+ +G +IH YI
Sbjct: 467 NTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526
Query: 238 EERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRAL 297
+ V N+++DMYAKCG L A +FD+I K LV+W M+ + +HG G A+
Sbjct: 527 RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI-ASKDLVSWTVMIAGYGMHGFGKEAI 585
Query: 298 ELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMAN-CGVKPNMKHYGSVVDL 356
LF QM +AG++ D++S+++ L AC+H+GLVD+G R FN M + C ++P ++HY +VD+
Sbjct: 586 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 645
Query: 357 LGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDF 416
L R G L +A ++++ + D +W LL C+++ DV++AE + K+ E+ N G +
Sbjct: 646 LARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYY 705
Query: 417 VLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIY 476
VL++N+YA E+W+ V R+RK + R ++K PG S+IE+ G ++ F D S+ + I
Sbjct: 706 VLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIE 765
Query: 477 EKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVF 536
L ++ ++ E GY+ T L D E EKE ALC HSEKLA+A G+IS+ I+V
Sbjct: 766 AFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVT 825
Query: 537 KNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
KNLR+C DCH++ K +SK+ REI++RD RFH+FKDG CSC+ +W
Sbjct: 826 KNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 172/338 (50%), Gaps = 15/338 (4%)
Query: 57 ELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALK 116
+L A +F ++ +N ++ LA S + ++ +++M+ D+ T S K
Sbjct: 144 DLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK 203
Query: 117 ACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIAS 176
+ + + ++ Q+H +L+ GF +G +L+ Y K + SA+KVFDEM RD+ S
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS 263
Query: 177 WNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHE-- 234
WN++I G LA + + +F +M + G+ + + T++ A C G +H
Sbjct: 264 WNSIINGYVSNGLAEKGLSVFVQMLVSGI-EIDLATIVSVFAGCADSRLISLGRAVHSIG 322
Query: 235 ----YIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVH 290
+ RE+R CN ++DMY+KCG LD A VF + R S+V++ +M+ +A
Sbjct: 323 VKACFSREDRF------CNTLLDMYSKCGDLDSAKAVFREMSDR-SVVSYTSMIAGYARE 375
Query: 291 GDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHY 350
G A++LFE+M G+ PD + A L C L+D+G R+ + + ++
Sbjct: 376 GLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS 435
Query: 351 GSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGA 388
+++D+ + G +QEA ++V S D++ W T++G
Sbjct: 436 NALMDMYAKCGSMQEA-ELVFSEMRVKDIISWNTIIGG 472
Score = 95.9 bits (237), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 140/303 (46%), Gaps = 4/303 (1%)
Query: 72 STNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIH 131
S D N LR S NAV + G D T L+ CA +L + ++
Sbjct: 60 SVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVD 117
Query: 132 SHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLAS 191
+ + +GF+ D+ LG+ L +Y G++ A +VFDE+ + WN L+ LA+ S
Sbjct: 118 NFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFS 177
Query: 192 EAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAV 251
++ LFK+M GV + + T + L + G+++H +I + V N++
Sbjct: 178 GSIGLFKKMMSSGV-EMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSL 236
Query: 252 IDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPD 311
+ Y K +D A +VFD + + +++WN+++ + +G + L +F QM +G++ D
Sbjct: 237 VAFYLKNQRVDSARKVFDEMT-ERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEID 295
Query: 312 DVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVK 371
+ ++ C + L+ G + + + +++D+ + G L A + +
Sbjct: 296 LATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Query: 372 SVS 374
+S
Sbjct: 356 EMS 358
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/550 (38%), Positives = 320/550 (58%), Gaps = 34/550 (6%)
Query: 61 AHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFAL----- 115
A F +N +N ++ G A S K A RQ+ S D T + +
Sbjct: 238 ARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA----RQLFDESPVQDVFTWTAMVSGYIQ 293
Query: 116 -KACARVLALFETLQIHSHVLRHGFLADALLG---------------------TTLLDVY 153
+ LF+ + + V + LA + G T++ Y
Sbjct: 294 NRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGY 353
Query: 154 AKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTV 213
A+ G+I AK +FD+M RD SW A+IAG +Q + EA+ LF +M+ EG + N +
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSF 412
Query: 214 LGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKC 273
AL+ C + A + G ++H + + + V NA++ MY KCG +++A ++F +
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM-A 471
Query: 274 RKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVR 333
K +V+WNTM+ ++ HG G AL FE M R G+KPDD + +A L AC+H GLVD G +
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 334 LFNSMA-NCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLY 392
F +M + GV PN +HY +VDLLGRAG L++A +++K++ D +W TLLGA +++
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 393 GDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSY 452
G+ E+AE A+ K+ M N G +VLLSNLYA+ RW DVG++R M+++ VKKVPG+S+
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSW 651
Query: 453 IEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALC 512
IE+ H F D+ H + EI+ L+E+ ++K+ GY + TS VLHD+ EEEKE +
Sbjct: 652 IEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVR 711
Query: 513 YHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFK 572
YHSE+LAVA+G++ S I+V KNLR+C DCH+ IK ++++ R II+RD RFH FK
Sbjct: 712 YHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFK 771
Query: 573 DGACSCKDYW 582
DG+CSC DYW
Sbjct: 772 DGSCSCGDYW 781
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 130/273 (47%), Gaps = 26/273 (9%)
Query: 149 LLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKP 208
LL + K +IV A++ FD M VRD+ SWN +I G AQ EA LF ++ VF
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 209 NEVTVLGALAACGHLGAWKEGDKIHE------------YIREERLDM-----------NV 245
+ V G + A + DK+ E Y++ ER++M NV
Sbjct: 285 TAM-VSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV 343
Query: 246 VVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGR 305
N +I YA+CG + +A +FD + ++ V+W M+ ++ G AL LF QM R
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 306 AGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQE 365
G + + S+ +AL C ++ G +L + G + +++ + + G ++E
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 366 ACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMA 398
A D+ K ++ G D+V W T++ +G E+A
Sbjct: 463 ANDLFKEMA-GKDIVSWNTMIAGYSRHGFGEVA 494
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 41/246 (16%)
Query: 118 CARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASW 177
C L +F+ + S V +G ++ Y + GE A+K+FDEM RD+ SW
Sbjct: 80 CNEALRVFKRMPRWSSVSYNGMISG----------YLRNGEFELARKLFDEMPERDLVSW 129
Query: 178 NALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACG---------------- 221
N +I G + +A +LF+ M V N T+L A G
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIMPERDVCSWN--TMLSGYAQNGCVDDARSVFDRMPEKN 187
Query: 222 ------HLGAWKEGDKIHE--YIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKC 273
L A+ + K+ E + + R + +V N ++ + K + +A + FD++
Sbjct: 188 DVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNV 247
Query: 274 RKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVR 333
R +V+WNT++ +A G A +LF++ D ++ A + +V++
Sbjct: 248 R-DVVSWNTIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 334 LFNSMA 339
LF+ M
Sbjct: 303 LFDKMP 308
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 129/341 (37%), Gaps = 73/341 (21%)
Query: 161 SAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAAC 220
S K + G DI WN I+ + +EA+ +FKRM
Sbjct: 51 SQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMP------------------- 91
Query: 221 GHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTW 280
W V N +I Y + G + A ++FD + R LV+W
Sbjct: 92 ----RWSS-----------------VSYNGMISGYLRNGEFELARKLFDEMPER-DLVSW 129
Query: 281 NTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMAN 340
N M+ + + + +A ELFE M + D S+ L G VDD +F+ M
Sbjct: 130 NVMIKGYVRNRNLGKARELFEIM----PERDVCSWNTMLSGYAQNGCVDDARSVFDRMP- 184
Query: 341 CGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEI 400
+ N + +++ + +++EAC + KS +V W LLG +
Sbjct: 185 ---EKNDVSWNALLSAYVQNSKMEEACMLFKSRE-NWALVSWNCLLGGF----------V 230
Query: 401 ASRKLVE----MGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVG 456
+K+VE S N D V + + Y + + R+ V+ V ++ + V
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAM-VS 289
Query: 457 GVIHKFFTSDKSHVKWREIYEKL---DEIMFKIKEYGYAAG 494
G I + RE+++K+ +E+ + GY G
Sbjct: 290 GYIQNRMVEEA-----RELFDKMPERNEVSWNAMLAGYVQG 325
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 96/249 (38%), Gaps = 50/249 (20%)
Query: 150 LDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPN 209
+ Y + G A +VF M S+N +I+G + A LF M
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMP-------- 122
Query: 210 EVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFD 269
+ ++V N +I Y + L KA E+F+
Sbjct: 123 --------------------------------ERDLVSWNVMIKGYVRNRNLGKARELFE 150
Query: 270 NIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVD 329
I + + +WNTM+ +A +G A +F++M + +DVS+ A L A ++
Sbjct: 151 -IMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKME 205
Query: 330 DGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGAC 389
+ LF S N + + ++ + ++ EA S+++ D+V W T++
Sbjct: 206 EACMLFKSRENWA----LVSWNCLLGGFVKKKKIVEARQFFDSMNV-RDVVSWNTIITGY 260
Query: 390 QLYGDVEMA 398
G ++ A
Sbjct: 261 AQSGKIDEA 269
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/563 (38%), Positives = 322/563 (57%), Gaps = 36/563 (6%)
Query: 55 LNELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRS-DALTCSF 113
+ ++ A A F Q+ +N+++ G A+ + +MLR S S D T +
Sbjct: 225 VGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLAS 284
Query: 114 ALKACARVLALFETLQIHSHVLRHGF-----LADALLG---------------------- 146
L ACA + L QIHSH++ GF + +AL+
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 147 ------TTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRM 200
T LLD Y K+G++ AK +F + RD+ +W A+I G Q EA++LF+ M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 201 KMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGL 260
+ G +PN T+ L+ L + G +IH + +V V NA+I MYAK G
Sbjct: 405 -VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGN 463
Query: 261 LDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALC 320
+ A FD I+C + V+W +M++A A HG ALELFE M G++PD ++Y+
Sbjct: 464 ITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFS 523
Query: 321 ACNHAGLVDDGVRLFNSMANCG-VKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDM 379
AC HAGLV+ G + F+ M + + P + HY +VDL GRAG LQEA + ++ + + D+
Sbjct: 524 ACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDV 583
Query: 380 VLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAM 439
V W +LL AC+++ ++++ ++A+ +L+ + N G + L+NLY+A +W++ ++RK+M
Sbjct: 584 VTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSM 643
Query: 440 KNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVL 499
K+ VKK GFS+IEV +H F D +H + EIY + +I +IK+ GY T+ VL
Sbjct: 644 KDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVL 703
Query: 500 HDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNRE 559
HD+ EE KE L +HSEKLA+AFGLIST + T++++ KNLR+C DCH IK ISK+ RE
Sbjct: 704 HDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGRE 763
Query: 560 IIVRDRVRFHRFKDGACSCKDYW 582
IIVRD RFH FKDG CSC+DYW
Sbjct: 764 IIVRDTTRFHHFKDGFCSCRDYW 786
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 164/399 (41%), Gaps = 65/399 (16%)
Query: 64 LFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLA 123
F Q+ + + ++ G + + A+ M++ T + L + A
Sbjct: 102 FFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRC 161
Query: 124 LFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIA- 182
+ ++HS +++ G + + +LL++YAK G+ + AK VFD M VRDI+SWNA+IA
Sbjct: 162 METGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIAL 221
Query: 183 ------------------------------GLAQGNLASEAVDLFKRMKMEGVFKPNEVT 212
G Q A+D+F +M + + P+ T
Sbjct: 222 HMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFT 281
Query: 213 VLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCG------------- 259
+ L+AC +L G +IH +I D++ +V NA+I MY++CG
Sbjct: 282 LASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRG 341
Query: 260 -----------LLD---------KAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALEL 299
LLD +A +F ++K R +V W M++ + HG A+ L
Sbjct: 342 TKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR-DVVAWTAMIVGYEQHGSYGEAINL 400
Query: 300 FEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGR 359
F M G +P+ + A L + + G ++ S G ++ +++ + +
Sbjct: 401 FRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAK 460
Query: 360 AGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMA 398
AG + A + D V W +++ A +G E A
Sbjct: 461 AGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 142/334 (42%), Gaps = 71/334 (21%)
Query: 108 ALTCSFALKACARVL--------ALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEI 159
L+ S L+ C +L F +H V++ G + L L++VY+K G
Sbjct: 6 PLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYA 65
Query: 160 VSAKKVFDEMGVRDIASWNALIAGLAQ-GNLAS--------------------------- 191
+ A+K+FDEM +R SWN +++ ++ G++ S
Sbjct: 66 LHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIG 125
Query: 192 ---EAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVC 248
+A+ + M EG+ +P + T+ LA+ + G K+H +I + L NV V
Sbjct: 126 QYHKAIRVMGDMVKEGI-EPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVS 184
Query: 249 NAVIDMYAKCGLLDKAFEVFDNIKCR------------------------------KSLV 278
N++++MYAKCG A VFD + R + +V
Sbjct: 185 NSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIV 244
Query: 279 TWNTMVMAFAVHGDGPRALELFEQMGRAG-VKPDDVSYLAALCACNHAGLVDDGVRLFNS 337
TWN+M+ F G RAL++F +M R + PD + + L AC + + G ++ +
Sbjct: 245 TWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSH 304
Query: 338 MANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVK 371
+ G + +++ + R G ++ A +++
Sbjct: 305 IVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
>sp|Q683I9|PP295_ARATH Pentatricopeptide repeat-containing protein At3g62890
OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1
Length = 573
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/567 (36%), Positives = 336/567 (59%), Gaps = 43/567 (7%)
Query: 58 LAYAHALF--RQINAPSTNDFNAVLRGLAHS-SKPT--NAVLWYRQMLRGSHRSDALTCS 112
+AYA+ +F R + S +N ++R + H+ S P + + Y +M D T
Sbjct: 8 IAYANPIFHIRHLKLESFL-WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFP 66
Query: 113 FALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVR 172
F L + L L + H+ +L G D + T+LL++Y+ G++ SA++VFD+ G +
Sbjct: 67 FLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSK 126
Query: 173 DIASWNALIAGLAQGNLAS-------------------------------EAVDLFKRMK 201
D+ +WN+++ A+ L EA+DLF+ M+
Sbjct: 127 DLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQ 186
Query: 202 M----EGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAK 257
+ E +PNE T+ L+ACG LGA ++G +H YI + +++++V+ A+IDMYAK
Sbjct: 187 LPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAK 246
Query: 258 CGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRA-GVKPDDVSYL 316
CG L++A VF+ + +K + ++ M+ A++G +LF +M + + P+ V+++
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 317 AALCACNHAGLVDDGVRLFNSM-ANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSM 375
L AC H GL+++G F M G+ P+++HYG +VDL GR+G ++EA + S+ M
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 376 GTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRV 435
D+++W +LL ++ GD++ E A ++L+E+ N G +VLLSN+YA RW +V +
Sbjct: 367 EPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCI 426
Query: 436 RKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGT 495
R M+ + + KVPG SY+EV GV+H+F D+S + IY LDEIM +++E GY T
Sbjct: 427 RHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDT 486
Query: 496 SCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKV 555
VL D+ E++KE AL YHSEKLA+AF L+ T T +++ KNLRIC DCH V+K+ISK+
Sbjct: 487 KEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKL 546
Query: 556 YNREIIVRDRVRFHRFKDGACSCKDYW 582
++REI+VRD RFH F+DG+CSC+D+W
Sbjct: 547 FSREIVVRDCNRFHHFRDGSCSCRDFW 573
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 214/582 (36%), Positives = 342/582 (58%), Gaps = 14/582 (2%)
Query: 2 ANLNALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYA 61
A + L++ C SN AV ++ + HL G + +F V I + + LN+ A
Sbjct: 62 ATYSELIKCCISNRAVHEGNL--ICRHLYFNGH-RPMMFLVNVLINMYVKFNLLND---A 115
Query: 62 HALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARV 121
H LF Q+ + + ++ + A+ MLR + R + T S L++C
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCN-- 173
Query: 122 LALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALI 181
+ + +H +++ G +D + + L+DV+AK+GE A VFDEM D WN++I
Sbjct: 174 -GMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 182 AGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERL 241
G AQ + + A++LFKRMK G F + T+ L AC L + G + H +I +
Sbjct: 233 GGFAQNSRSDVALELFKRMKRAG-FIAEQATLTSVLRACTGLALLELGMQAHVHI--VKY 289
Query: 242 DMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFE 301
D ++++ NA++DMY KCG L+ A VF+ +K + ++TW+TM+ A +G AL+LFE
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 302 QMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANC-GVKPNMKHYGSVVDLLGRA 360
+M +G KP+ ++ + L AC+HAGL++DG F SM G+ P +HYG ++DLLG+A
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 361 GRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLS 420
G+L +A ++ + D V W+TLLGAC++ ++ +AE A++K++ + + G + LLS
Sbjct: 409 GKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLS 468
Query: 421 NLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLD 480
N+YA ++WD V +R M++R +KK PG S+IEV IH F D SH + E+ +KL+
Sbjct: 469 NIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLN 528
Query: 481 EIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLR 540
+++ ++ GY T+ VL D+ E+ E++L +HSEKLA+AFGL++ I++ KNLR
Sbjct: 529 QLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLR 588
Query: 541 ICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
IC DCH KL SK+ R I++RD +R+H F+DG CSC DYW
Sbjct: 589 ICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 142/283 (50%), Gaps = 8/283 (2%)
Query: 106 SDALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKV 165
+D+ T S +K C A+ E I H+ +G L L+++Y K + A ++
Sbjct: 59 ADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQL 118
Query: 166 FDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGA 225
FD+M R++ SW +I+ ++ + +A++L M + V +PN T L +C +
Sbjct: 119 FDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNV-RPNVYTYSSVLRSCNGMSD 177
Query: 226 WKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVM 285
+ +H I +E L+ +V V +A+ID++AK G + A VFD + ++V WN+++
Sbjct: 178 VR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV-WNSIIG 233
Query: 286 AFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKP 345
FA + ALELF++M RAG + + + L AC L++ G++ +
Sbjct: 234 GFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQ 291
Query: 346 NMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGA 388
++ ++VD+ + G L++A + + D++ W T++
Sbjct: 292 DLILNNALVDMYCKCGSLEDALRVFNQMK-ERDVITWSTMISG 333
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/523 (38%), Positives = 308/523 (58%), Gaps = 3/523 (0%)
Query: 61 AHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACAR 120
AH LF +I S + A+ G S + A+ +++M+ + D+ L AC
Sbjct: 165 AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVH 224
Query: 121 VLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNAL 180
V L I ++ ++ + TTL+++YAK G++ A+ VFD M +DI +W+ +
Sbjct: 225 VGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTM 284
Query: 181 IAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREER 240
I G A + E ++LF +M E + KP++ +++G L++C LGA G+ I
Sbjct: 285 IQGYASNSFPKEGIELFLQMLQENL-KPDQFSIVGFLSSCASLGALDLGEWGISLIDRHE 343
Query: 241 LDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELF 300
N+ + NA+IDMYAKCG + + FEVF +K K +V N + A +G + +F
Sbjct: 344 FLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLSFAVF 402
Query: 301 EQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANC-GVKPNMKHYGSVVDLLGR 359
Q + G+ PD ++L LC C HAGL+ DG+R FN+++ +K ++HYG +VDL GR
Sbjct: 403 GQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGR 462
Query: 360 AGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLL 419
AG L +A ++ + M + ++W LL C+L D ++AE ++L+ + N G++V L
Sbjct: 463 AGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQL 522
Query: 420 SNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKL 479
SN+Y+ RWD+ VR M + +KK+PG+S+IE+ G +H+F DKSH +IY KL
Sbjct: 523 SNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKL 582
Query: 480 DEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNL 539
+++ +++ G+ T V D+ EEEKE L YHSEKLAVA GLIST I+V KNL
Sbjct: 583 EDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNL 642
Query: 540 RICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
R+C DCH+V+KLISK+ REI+VRD RFH F +G+CSC DYW
Sbjct: 643 RVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 170/342 (49%), Gaps = 3/342 (0%)
Query: 57 ELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALK 116
+ Y++ LF P+ +N+++ G ++ + + + + T LK
Sbjct: 60 QTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLK 119
Query: 117 ACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIAS 176
AC R + + +HS V++ GF D T+LL +Y+ G + A K+FDE+ R + +
Sbjct: 120 ACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVT 179
Query: 177 WNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYI 236
W AL +G EA+DLFK+M GV KP+ ++ L+AC H+G G+ I +Y+
Sbjct: 180 WTALFSGYTTSGRHREAIDLFKKMVEMGV-KPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 237 REERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRA 296
E + N V ++++YAKCG ++KA VFD++ K +VTW+TM+ +A +
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQGYASNSFPKEG 297
Query: 297 LELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDL 356
+ELF QM + +KPD S + L +C G +D G + + N+ +++D+
Sbjct: 298 IELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDM 357
Query: 357 LGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMA 398
+ G + ++ K + D+V+ + G V+++
Sbjct: 358 YAKCGAMARGFEVFKEMK-EKDIVIMNAAISGLAKNGHVKLS 398
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/527 (37%), Positives = 319/527 (60%), Gaps = 4/527 (0%)
Query: 58 LAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKA 117
L+YA +F I + + N +NA++ G A S+ P ++ + QM D+ T L A
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 118 CARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASW 177
C+++ +L ++H ++R+ D + ++L +Y GE+ + + +FD M + + SW
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 178 NALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIR 237
N +I G Q A+ +F++M + G+ + ++++ AC L + + G + H Y
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGI-QLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 238 EERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRAL 297
+ L+ + + ++IDMYAK G + ++ +VF+ +K KS +WN M+M + +HG A+
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIHGLAKEAI 683
Query: 298 ELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSM-ANCGVKPNMKHYGSVVDL 356
+LFE+M R G PDD+++L L ACNH+GL+ +G+R + M ++ G+KPN+KHY V+D+
Sbjct: 684 KLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDM 743
Query: 357 LGRAGRLQEACDIV-KSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGD 415
LGRAG+L +A +V + +S D+ +W++LL +C+++ ++EM E + KL E+ +
Sbjct: 744 LGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPEN 803
Query: 416 FVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREI 475
+VLLSNLYA +W+DV +VR+ M ++K G S+IE+ + F ++ + EI
Sbjct: 804 YVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEI 863
Query: 476 YEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQV 535
+ KI + GY T V HD+ EEEK L HSEKLA+ +GLI TSE T+I+V
Sbjct: 864 KSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRV 923
Query: 536 FKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
+KNLRIC DCH+ KLISKV REI+VRD RFH FK+G CSC DYW
Sbjct: 924 YKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 143/293 (48%), Gaps = 13/293 (4%)
Query: 44 SKIIEFYAL--SPLNELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLR 101
++II YA+ SP + + +F + + + +NAV+ + + + + +M+
Sbjct: 124 TRIITMYAMCGSPDD----SRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMIS 179
Query: 102 GSHR-SDALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIV 160
+ D T +KACA + + L +H V++ G + D +G L+ Y G +
Sbjct: 180 TTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 239
Query: 161 SAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKME---GVFKPNEVTVLGAL 217
A ++FD M R++ SWN++I + + E+ L M E G F P+ T++ L
Sbjct: 240 DALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVL 299
Query: 218 AACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSL 277
C G +H + + RLD +V+ NA++DMY+KCG + A +F + K++
Sbjct: 300 PVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIF-KMNNNKNV 358
Query: 278 VTWNTMVMAFAVHGDGPRALELFEQM--GRAGVKPDDVSYLAALCACNHAGLV 328
V+WNTMV F+ GD ++ QM G VK D+V+ L A+ C H +
Sbjct: 359 VSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 134/265 (50%), Gaps = 4/265 (1%)
Query: 61 AHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSH--RSDALTCSFALKAC 118
A +F+ N + +N ++ G + RQML G ++D +T A+ C
Sbjct: 346 AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Query: 119 ARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWN 178
L ++H + L+ F+ + L+ + YAK G + A++VF + + + SWN
Sbjct: 406 FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN 465
Query: 179 ALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIRE 238
ALI G AQ N ++D +MK+ G+ P+ TV L+AC L + + G ++H +I
Sbjct: 466 ALIGGHAQSNDPRLSLDAHLQMKISGLL-PDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 239 ERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALE 298
L+ ++ V +V+ +Y CG L +FD ++ KSLV+WNT++ + +G RAL
Sbjct: 525 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAME-DKSLVSWNTVITGYLQNGFPDRALG 583
Query: 299 LFEQMGRAGVKPDDVSYLAALCACN 323
+F QM G++ +S + AC+
Sbjct: 584 VFRQMVLYGIQLCGISMMPVFGACS 608
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 134/271 (49%), Gaps = 10/271 (3%)
Query: 57 ELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALK 116
EL ALF + S +N V+ G + P A+ +RQM+ + ++
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 117 ACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIAS 176
AC+ + +L + H++ L+H DA + +L+D+YAK G I + KVF+ + + AS
Sbjct: 606 ACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTAS 665
Query: 177 WNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYI 236
WNA+I G LA EA+ LF+ M+ G P+++T LG L AC H G EG + + +
Sbjct: 666 WNAMIMGYGIHGLAKEAIKLFEEMQRTG-HNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 724
Query: 237 REE-RLDMNVVVCNAVIDMYAKCGLLDKAFEVF-DNIKCRKSLVTWNTMVMAFAVHGD-- 292
+ L N+ VIDM + G LDKA V + + + W +++ + +H +
Sbjct: 725 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 784
Query: 293 -GPR-ALELFEQMGRAGVKPDDVSYLAALCA 321
G + A +LFE KP++ L+ L A
Sbjct: 785 MGEKVAAKLFELEPE---KPENYVLLSNLYA 812
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 6/284 (2%)
Query: 142 DALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMK 201
D +L T ++ +YA G ++ VFD + +++ WNA+I+ ++ L E ++ F M
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMI 178
Query: 202 MEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLL 261
P+ T + AC + G +H + + L +V V NA++ Y G +
Sbjct: 179 STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFV 238
Query: 262 DKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRAL----ELFEQMGRAGVKPDDVSYLA 317
A ++FD I ++LV+WN+M+ F+ +G + E+ E+ G PD + +
Sbjct: 239 TDALQLFD-IMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVT 297
Query: 318 ALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGT 377
L C + G + + + +++D+ + G + A I K ++
Sbjct: 298 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNK 356
Query: 378 DMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSN 421
++V W T++G GD R+++ G + D V + N
Sbjct: 357 NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILN 400
Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 217 LAACGHLGAWKEGDKIHEYIR-EERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRK 275
L A G + G KIH+ + RL + V+C +I MYA CG D + VFD ++ K
Sbjct: 91 LQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALR-SK 149
Query: 276 SLVTWNTMVMAFAVHGDGPRALELF-EQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRL 334
+L WN ++ +++ + LE F E + + PD +Y + AC AG+ D G+ L
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC--AGMSDVGIGL 207
Query: 335 --FNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLY 392
+ G+ ++ ++V G G + +A + + ++V W +++ +++
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF-DIMPERNLVSWNSMI---RVF 263
Query: 393 GDVEMAEIASRKLVEMGSNNCGDFVLLSNL 422
D +E + L EM N GD + ++
Sbjct: 264 SDNGFSEESFLLLGEMMEEN-GDGAFMPDV 292
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 202/519 (38%), Positives = 310/519 (59%), Gaps = 13/519 (2%)
Query: 76 FNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVL 135
++A + G A A+ RQML + + +T L CA V AL +IH + +
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 136 RH-------GFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGV--RDIASWNALIAGLAQ 186
++ G + ++ L+D+YAK ++ +A+ +FD + RD+ +W +I G +Q
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 187 GNLASEAVDLFKRMKMEGV-FKPNEVTVLGALAACGHLGAWKEGDKIHEY-IREERLDMN 244
A++A++L M E +PN T+ AL AC L A + G +IH Y +R ++ +
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP 512
Query: 245 VVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMG 304
+ V N +IDMYAKCG + A VFDN+ K+ VTW +++ + +HG G AL +F++M
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMA-KNEVTWTSLMTGYGMHGYGEEALGIFDEMR 571
Query: 305 RAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANC-GVKPNMKHYGSVVDLLGRAGRL 363
R G K D V+ L L AC+H+G++D G+ FN M GV P +HY +VDLLGRAGRL
Sbjct: 572 RIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRL 631
Query: 364 QEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLY 423
A +++ + M V+W L C+++G VE+ E A+ K+ E+ SN+ G + LLSNLY
Sbjct: 632 NAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLY 691
Query: 424 AAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIM 483
A RW DV R+R M+++ VKK PG S++E FF DK+H +EIY+ L + M
Sbjct: 692 ANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHM 751
Query: 484 FKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICR 543
+IK+ GY T LHD+ +EEK++ L HSEKLA+A+G+++T + +I++ KNLR+C
Sbjct: 752 QRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCG 811
Query: 544 DCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
DCH +S++ + +II+RD RFH FK+G+CSCK YW
Sbjct: 812 DCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 176/367 (47%), Gaps = 15/367 (4%)
Query: 6 ALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALF 65
+ KC + V IH K L + T + S +I Y + L++A +L
Sbjct: 33 PFIHKCKTISQVKLIHQKLLSFGILTLN--------LTSHLISTYI--SVGCLSHAVSLL 82
Query: 66 RQINAPS---TNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVL 122
R+ PS +N+++R + + + M S D T F KAC +
Sbjct: 83 RRF-PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEIS 141
Query: 123 ALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIA 182
++ H+ L GF+++ +G L+ +Y++ + A+KVFDEM V D+ SWN++I
Sbjct: 142 SVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIE 201
Query: 183 GLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLD 242
A+ A+++F RM E +P+ +T++ L C LG G ++H + +
Sbjct: 202 SYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMI 261
Query: 243 MNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQ 302
N+ V N ++DMYAKCG++D+A VF N+ K +V+WN MV ++ G A+ LFE+
Sbjct: 262 QNMFVGNCLVDMYAKCGMMDEANTVFSNMSV-KDVVSWNAMVAGYSQIGRFEDAVRLFEK 320
Query: 303 MGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGR 362
M +K D V++ AA+ GL + + + M + G+KPN SV+ G
Sbjct: 321 MQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGA 380
Query: 363 LQEACDI 369
L +I
Sbjct: 381 LMHGKEI 387
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 210/565 (37%), Positives = 333/565 (58%), Gaps = 19/565 (3%)
Query: 23 KQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTND----FNA 78
+QL H+T G +++ F V + +I Y L +A A +F + P ++ +NA
Sbjct: 73 QQLHCHVTKGG-CETEPF-VLTALISMYCKCGL--VADARKVFEE--NPQSSQLSVCYNA 126
Query: 79 VLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHG 138
++ G +SK T+A +R+M D++T + C L+ +H ++ G
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 139 FLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFK 198
++ + + + +Y K G + + +++FDEM V+ + +WNA+I+G +Q LA + ++L++
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 199 RMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKC 258
+MK GV P+ T++ L++C HLGA K G ++ + + NV V NA I MYA+C
Sbjct: 247 QMKSSGVC-PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARC 305
Query: 259 GLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAA 318
G L KA VFD I KSLV+W M+ + +HG G L LF+ M + G++PD ++
Sbjct: 306 GNLAKARAVFD-IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMV 364
Query: 319 LCACNHAGLVDDGVRLFNSMA-NCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGT 377
L AC+H+GL D G+ LF +M ++P +HY +VDLLGRAGRL EA + ++S+ +
Sbjct: 365 LSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEP 424
Query: 378 DMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRK 437
D +W LLGAC+++ +V+MAE+A K++E NN G +VL+SN+Y+ + + + R+R
Sbjct: 425 DGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRV 484
Query: 438 AMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSC 497
M+ R +K PG+SY+E G +H F D+SH + E++ LDE+ + E A C
Sbjct: 485 MMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVME--LAGNMDC 542
Query: 498 VLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYN 557
D GEE HSE+LA+AFG++++ T I V KNLR+C DCH +K +SK+ +
Sbjct: 543 ---DRGEEVSSTTR-EHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVD 598
Query: 558 REIIVRDRVRFHRFKDGACSCKDYW 582
R+ +VRD RFH FKDG CSCKDYW
Sbjct: 599 RQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 189/385 (49%), Gaps = 7/385 (1%)
Query: 68 INAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFET 127
+ A ++ +N LR LA+ S + ++ YR MLR DA + F LK+CA +
Sbjct: 13 VAAVASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSG 72
Query: 128 LQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIAS--WNALIAGLA 185
Q+H HV + G + + T L+ +Y K G + A+KVF+E S +NALI+G
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 186 QGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNV 245
+ ++A +F+RMK GV + VT+LG + C G +H + LD V
Sbjct: 133 ANSKVTDAAYMFRRMKETGV-SVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEV 191
Query: 246 VVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGR 305
V N+ I MY KCG ++ +FD + K L+TWN ++ ++ +G LEL+EQM
Sbjct: 192 AVLNSFITMYMKCGSVEAGRRLFDEMPV-KGLITWNAVISGYSQNGLAYDVLELYEQMKS 250
Query: 306 AGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQE 365
+GV PD + ++ L +C H G G + + + G PN+ + + + R G L +
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAK 310
Query: 366 ACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAA 425
A + + + + +V W ++G ++G E+ + +++ G G ++ +
Sbjct: 311 ARAVFDIMPVKS-LVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACS 369
Query: 426 YERWDDVG-RVRKAMKNRDVKKVPG 449
+ D G + +AMK R+ K PG
Sbjct: 370 HSGLTDKGLELFRAMK-REYKLEPG 393
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/561 (37%), Positives = 317/561 (56%), Gaps = 7/561 (1%)
Query: 23 KQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRG 82
+Q+ + + T FQ + V S +I+ YA L +L A + + + ++ G
Sbjct: 510 EQIHSQIIKT-NFQLNAY-VCSVLIDMYA--KLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 83 LAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLAD 142
+ A+ +RQML RSD + + A+ ACA + AL E QIH+ GF +D
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 143 ALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKM 202
L+ +Y++ G+I + F++ D +WNAL++G Q EA+ +F RM
Sbjct: 626 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 685
Query: 203 EGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLD 262
EG+ N T A+ A K+G ++H I + D VCNA+I MYAKCG +
Sbjct: 686 EGI-DNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 263 KAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCAC 322
A + F + K+ V+WN ++ A++ HG G AL+ F+QM + V+P+ V+ + L AC
Sbjct: 745 DAEKQFLEVST-KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSAC 803
Query: 323 NHAGLVDDGVRLFNSM-ANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVL 381
+H GLVD G+ F SM + G+ P +HY VVD+L RAG L A + ++ + + D ++
Sbjct: 804 SHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALV 863
Query: 382 WQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKN 441
W+TLL AC ++ ++E+ E A+ L+E+ + +VLLSNLYA ++WD R+ MK
Sbjct: 864 WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKE 923
Query: 442 RDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHD 501
+ VKK PG S+IEV IH F+ D++H EI+E ++ + E GY +L++
Sbjct: 924 KGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNE 983
Query: 502 IGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREII 561
+ E+K+ + HSEKLA++FGL+S I V KNLR+C DCH IK +SKV NREII
Sbjct: 984 LQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREII 1043
Query: 562 VRDRVRFHRFKDGACSCKDYW 582
VRD RFH F+ GACSCKDYW
Sbjct: 1044 VRDAYRFHHFEGGACSCKDYW 1064
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 208/424 (49%), Gaps = 10/424 (2%)
Query: 2 ANLNALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYA 61
+ +L+ C G+V+ ++Q+ A + G S + V + +I+ Y+ + +LA
Sbjct: 187 GTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTV--VCNPLIDLYSRNGFVDLA-- 241
Query: 62 HALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARV 121
+F + + + A++ GL+ + A+ + M S L AC ++
Sbjct: 242 RRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKI 301
Query: 122 LALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALI 181
+L Q+H VL+ GF +D + L+ +Y +G ++SA+ +F M RD ++N LI
Sbjct: 302 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
Query: 182 AGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERL 241
GL+Q +A++LFKRM ++G+ +P+ T+ + AC G G ++H Y +
Sbjct: 362 NGLSQCGYGEKAMELFKRMHLDGL-EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGF 420
Query: 242 DMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFE 301
N + A++++YAKC ++ A + F + +++V WN M++A+ + D + +F
Sbjct: 421 ASNNKIEGALLNLYAKCADIETALDYFLETEV-ENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 302 QMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAG 361
QM + P+ +Y + L C G ++ G ++ + + + N ++D+ + G
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Query: 362 RLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSN 421
+L A DI+ + G D+V W T++ Y + A R++++ G + D V L+N
Sbjct: 540 KLDTAWDILIRFA-GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS--DEVGLTN 596
Query: 422 LYAA 425
+A
Sbjct: 597 AVSA 600
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 5/296 (1%)
Query: 105 RSDALTCSFALKACARVL-ALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAK 163
R + T + L+ C + +L E ++HS +L+ G ++ L L D Y G++ A
Sbjct: 81 RPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAF 140
Query: 164 KVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAAC-GH 222
KVFDEM R I +WN +I LA NL E LF RM E V PNE T G L AC G
Sbjct: 141 KVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENV-TPNEGTFSGVLEACRGG 199
Query: 223 LGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNT 282
A+ ++IH I + L + VVCN +ID+Y++ G +D A VFD ++ K +W
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRL-KDHSSWVA 258
Query: 283 MVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCG 342
M+ + + A+ LF M G+ P ++ + L AC ++ G +L + G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 343 VKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMA 398
+ ++V L G L A I ++S D V + TL+ G E A
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQ-RDAVTYNTLINGLSQCGYGEKA 373
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/544 (38%), Positives = 309/544 (56%), Gaps = 40/544 (7%)
Query: 76 FNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVL 135
+N +L G S AV+ ++++ D +T S L + L IH +V+
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 136 RHGFLADALLGTTLLDVYAKVGEIVSAKKVFD-----EMGV------------------- 171
+ G L D + + ++D+Y K G + +F+ E GV
Sbjct: 280 KQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALE 339
Query: 172 -----------RDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAAC 220
++ SW ++IAG AQ EA++LF+ M++ GV KPN VT+ L AC
Sbjct: 340 MFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV-KPNHVTIPSMLPAC 398
Query: 221 GHLGAWKEGDKIHEY-IREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVT 279
G++ A G H + +R LD NV V +A+IDMYAKCG ++ + VF N+ K+LV
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVF-NMMPTKNLVC 456
Query: 280 WNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMA 339
WN+++ F++HG + +FE + R +KPD +S+ + L AC GL D+G + F M+
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 340 N-CGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMA 398
G+KP ++HY +V+LLGRAG+LQEA D++K + D +W LL +C+L +V++A
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
Query: 399 EIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGV 458
EIA+ KL + N G +VLLSN+YAA W +V +R M++ +KK PG S+I+V
Sbjct: 577 EIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNR 636
Query: 459 IHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKL 518
++ DKSH + +I EK+DEI ++++ G+ LHD+ E+E+E L HSEKL
Sbjct: 637 VYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKL 696
Query: 519 AVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSC 578
AV FGL++T + T +QV KNLRIC DCH VIK IS REI +RD RFH FKDG CSC
Sbjct: 697 AVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSC 756
Query: 579 KDYW 582
D+W
Sbjct: 757 GDFW 760
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 189/453 (41%), Gaps = 75/453 (16%)
Query: 42 VRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLR 101
+ +K+I Y S N A + + I P+ F++++ L + T ++ + +M
Sbjct: 52 ISAKLIASY--SNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFS 109
Query: 102 GSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVS 161
D+ K CA + A QIH G DA + ++ +Y + G +
Sbjct: 110 HGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 162 AKKVFDEMGVRD-----------------------------------IASWNALIAGLAQ 186
A+KVFD M +D I SWN +++G +
Sbjct: 170 ARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNR 229
Query: 187 GNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVV 246
EAV +F+++ G F P++VTV L + G G IH Y+ ++ L +
Sbjct: 230 SGYHKEAVVMFQKIHHLG-FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKC 288
Query: 247 VCNAVIDMYAKC-------------------------------GLLDKAFEVFDNIKCRK 275
V +A+IDMY K GL+DKA E+F+ K +
Sbjct: 289 VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQT 348
Query: 276 ---SLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGV 332
++V+W +++ A +G ALELF +M AGVKP+ V+ + L AC + + G
Sbjct: 349 MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGR 408
Query: 333 RLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLY 392
+ N+ +++D+ + GR+ + IV ++ ++V W +L+ ++
Sbjct: 409 STHGFAVRVHLLDNVHVGSALIDMYAKCGRINLS-QIVFNMMPTKNLVCWNSLMNGFSMH 467
Query: 393 GDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAA 425
G + E+ S M + DF+ ++L +A
Sbjct: 468 GKAK--EVMSIFESLMRTRLKPDFISFTSLLSA 498
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/536 (37%), Positives = 314/536 (58%), Gaps = 10/536 (1%)
Query: 51 ALSPLNELAYAHALFRQIN-APSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDAL 109
A S + A LF++I + + A++ G + AV + +M R R +
Sbjct: 339 AYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 110 TCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEM 169
T S L A L + ++H+ V++ + + +GT LLD Y K+G++ A KVF +
Sbjct: 399 TYSVILTA----LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 170 GVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGA-WKE 228
+DI +W+A++AG AQ A+ +F + G+ KPNE T L C A +
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGI-KPNEFTFSSILNVCAATNASMGQ 513
Query: 229 GDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFA 288
G + H + + RLD ++ V +A++ MYAK G ++ A EVF + K LV+WN+M+ +A
Sbjct: 514 GKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYA 572
Query: 289 VHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMA-NCGVKPNM 347
HG +AL++F++M + VK D V+++ AC HAGLV++G + F+ M +C + P
Sbjct: 573 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 632
Query: 348 KHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVE 407
+H +VDL RAG+L++A +++++ +W+T+L AC+++ E+ +A+ K++
Sbjct: 633 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIA 692
Query: 408 MGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDK 467
M + +VLLSN+YA W + +VRK M R+VKK PG+S+IEV + F D+
Sbjct: 693 MKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDR 752
Query: 468 SHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLIST 527
SH +IY KL+++ ++K+ GY TS VL DI +E KE L HSE+LA+AFGLI+T
Sbjct: 753 SHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIAT 812
Query: 528 SEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRF-KDGACSCKDYW 582
+ + + + KNLR+C DCH VIKLI+K+ REI+VRD RFH F DG CSC D+W
Sbjct: 813 PKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 132/267 (49%), Gaps = 2/267 (0%)
Query: 56 NELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFAL 115
+ L AH LF + + ++L G + + A + + R D S L
Sbjct: 41 SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 116 KACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIA 175
K A + Q+H ++ GFL D +GT+L+D Y K +KVFDEM R++
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 176 SWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEY 235
+W LI+G A+ ++ E + LF RM+ EG +PN T AL G G ++H
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGT-QPNSFTFAAALGVLAEEGVGGRGLQVHTV 219
Query: 236 IREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPR 295
+ + LD + V N++I++Y KCG + KA +FD + KS+VTWN+M+ +A +G
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV-KSVVTWNSMISGYAANGLDLE 278
Query: 296 ALELFEQMGRAGVKPDDVSYLAALCAC 322
AL +F M V+ + S+ + + C
Sbjct: 279 ALGMFYSMRLNYVRLSESSFASVIKLC 305
>sp|Q9LXE8|PP386_ARATH Pentatricopeptide repeat-containing protein At5g15340,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H91 PE=2
SV=1
Length = 623
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 214/602 (35%), Positives = 336/602 (55%), Gaps = 46/602 (7%)
Query: 23 KQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTN--DFNAVL 80
K+L A LTT+G ++ + + + +FYA S E+ A LF +I + D+ +L
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASS--GEMVTAQKLFDEIPLSEKDNVDWTTLL 83
Query: 81 RGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFL 140
+ N++ + +M R D ++ CA++ L Q H ++ G L
Sbjct: 84 SSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVL 143
Query: 141 ADALLGTTLLDVYAKVGEIVSAKKVFDE-------------------------------M 169
+ L+D+Y K G + K++F+E M
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
Query: 170 GVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEG 229
R+ +W ++AG E ++L M N VT+ L+AC G G
Sbjct: 204 PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVG 263
Query: 230 DKIHEYIREERLDM-------NVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNT 282
+H Y ++ + M +V+V A++DMYAKCG +D + VF ++ ++++VTWN
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNA 322
Query: 283 MVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCG 342
+ A+HG G +++F QM R VKPDD+++ A L AC+H+G+VD+G R F+S+ G
Sbjct: 323 LFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYG 381
Query: 343 VKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIAS 402
++P + HY +VDLLGRAG ++EA +++ + + + V+ +LLG+C ++G VE+AE
Sbjct: 382 LEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIK 441
Query: 403 RKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKF 462
R+L++M N +L+SN+Y A R D +R +++ R ++K+PG S I V +H+F
Sbjct: 442 RELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRF 501
Query: 463 FTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTS-CVLHDIGE-EEKENALCYHSEKLAV 520
+ D+SH + +EIY KL+E++ +I+ GY S V H G+ EEKE ALC HSEKLAV
Sbjct: 502 SSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAV 561
Query: 521 AFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKD 580
FGL+ T +T + VFKNLRICRDCH +K++SKVY+REII+RDR RFH+FK G+CSC D
Sbjct: 562 CFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSD 621
Query: 581 YW 582
YW
Sbjct: 622 YW 623
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 219/610 (35%), Positives = 335/610 (54%), Gaps = 37/610 (6%)
Query: 3 NLNALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIE-------------- 48
L +L+ SSNG VS KQ+ + G F+S L V S ++
Sbjct: 141 TLMTMLKLSSSNGHVSLG--KQIHGQVIKLG-FESYLL-VGSPLLYMYANVGCISDAKKV 196
Query: 49 FYALSPLNELAY---------------AHALFRQINAPSTNDFNAVLRGLAHSSKPTNAV 93
FY L N + Y A LFR + S + + A+++GLA + A+
Sbjct: 197 FYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVS-WAAMIKGLAQNGLAKEAI 255
Query: 94 LWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVY 153
+R+M + D L AC + A+ E QIH+ ++R F +G+ L+D+Y
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMY 315
Query: 154 AKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTV 213
K + AK VFD M +++ SW A++ G Q A EAV +F M+ G+ P+ T+
Sbjct: 316 CKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI-DPDHYTL 374
Query: 214 LGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKC 273
A++AC ++ + +EG + H L V V N+++ +Y KCG +D + +F+ +
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 274 RKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVR 333
R + V+W MV A+A G ++LF++M + G+KPD V+ + AC+ AGLV+ G R
Sbjct: 435 RDA-VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQR 493
Query: 334 LFNSM-ANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLY 392
F M + G+ P++ HY ++DL R+GRL+EA + + D + W TLL AC+
Sbjct: 494 YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNK 553
Query: 393 GDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSY 452
G++E+ + A+ L+E+ ++ + LLS++YA+ +WD V ++R+ M+ ++VKK PG S+
Sbjct: 554 GNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSW 613
Query: 453 IEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALC 512
I+ G +H F D+S +IY KL+E+ KI + GY TS V HD+ E K L
Sbjct: 614 IKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLN 673
Query: 513 YHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFK 572
YHSE+LA+AFGLI I+V KNLR+C DCH+ K IS V REI+VRD VRFHRFK
Sbjct: 674 YHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFK 733
Query: 573 DGACSCKDYW 582
DG CSC D+W
Sbjct: 734 DGTCSCGDFW 743
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/437 (28%), Positives = 203/437 (46%), Gaps = 44/437 (10%)
Query: 36 QSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLW 95
Q LF + ++ + ++E+ + F ++ +N ++ G + S AV
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEM---ESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 96 YRQMLRG-SHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYA 154
Y M+R S +T LK + + QIH V++ GF + L+G+ LL +YA
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 155 KVGEIVSAKKVFDEMGVR------------------------------DIASWNALIAGL 184
VG I AKKVF + R D SW A+I GL
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGL 245
Query: 185 AQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMN 244
AQ LA EA++ F+ MK++G+ K ++ L ACG LGA EG +IH I +
Sbjct: 246 AQNGLAKEAIECFREMKVQGL-KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 245 VVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMG 304
+ V +A+IDMY KC L A VFD +K +K++V+W MV+ + G A+++F M
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMK-QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ 363
Query: 305 RAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQ 364
R+G+ PD + A+ AC + +++G + G+ + S+V L G+ G +
Sbjct: 364 RSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDID 423
Query: 365 EACDIVKSVSMGTDMVLWQTLLGACQLYGD-VEMAEIASRKLVEMGSNNCGDFVLLSNLY 423
++ + +++ D V W ++ A +G VE ++ K+V+ G D V L+ +
Sbjct: 424 DSTRLFNEMNV-RDAVSWTAMVSAYAQFGRAVETIQLFD-KMVQHGLKP--DGVTLTGVI 479
Query: 424 AAYERWDDVGRVRKAMK 440
+A R G V K +
Sbjct: 480 SACSR---AGLVEKGQR 493
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 113/271 (41%), Gaps = 37/271 (13%)
Query: 130 IHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNL 189
IH +++R + L ++ YA + A++VFD + ++ SWN L+ ++ L
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 190 ASEAVDLFKRMK----------MEGV-------------------FKPN--EVTVLGALA 218
SE F+++ +EG F N VT++ L
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 219 ACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLV 278
G G +IH + + + ++V + ++ MYA G + A +VF + R + V
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT-V 206
Query: 279 TWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSM 338
+N+++ G AL+LF G++ D VS+ A + GL + + F M
Sbjct: 207 MYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 339 ANCGVKPNMKHYGSVVDLLGRAGRLQEACDI 369
G+K + +GSV+ G G + E I
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQI 292
>sp|Q9CA54|PP122_ARATH Pentatricopeptide repeat-containing protein At1g74630
OS=Arabidopsis thaliana GN=PCMP-H71 PE=2 SV=1
Length = 643
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/498 (39%), Positives = 307/498 (61%), Gaps = 19/498 (3%)
Query: 93 VLWYRQMLRGSHRSDALTCSFALKACAR------VLALFETLQIHSHVLRHGFLADALLG 146
V + R++ H+ + + + + AC R +F+ + + +H + LA
Sbjct: 157 VEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAG---- 212
Query: 147 TTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVF 206
Y K GE+ SAK++F EM RD SW+ +I G+A +E+ F+ ++ G+
Sbjct: 213 ------YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGM- 265
Query: 207 KPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFE 266
PNEV++ G L+AC G+++ G +H ++ + V V NA+IDMY++CG + A
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 267 VFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAG 326
VF+ ++ ++ +V+W +M+ A+HG G A+ LF +M GV PD +S+++ L AC+HAG
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 327 LVDDGVRLFNSMANC-GVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTL 385
L+++G F+ M ++P ++HYG +VDL GR+G+LQ+A D + + + ++W+TL
Sbjct: 386 LIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 445
Query: 386 LGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVK 445
LGAC +G++E+AE ++L E+ NN GD VLLSN YA +W DV +RK+M + +K
Sbjct: 446 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIK 505
Query: 446 KVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIK-EYGYAAGTSCVLHDIGE 504
K +S +EVG ++KF +K E +EKL EI+ ++K E GY + L+D+ E
Sbjct: 506 KTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEE 565
Query: 505 EEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRD 564
EEKE+ + HSEKLA+AF L S+ +I++ KNLRICRDCH V+KL SKVY EI+VRD
Sbjct: 566 EEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRD 625
Query: 565 RVRFHRFKDGACSCKDYW 582
R RFH FKDG+CSC+DYW
Sbjct: 626 RNRFHSFKDGSCSCRDYW 643
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 174/394 (44%), Gaps = 49/394 (12%)
Query: 6 ALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALF 65
+LL C + A++ IH ++ + T F KL I A+S + L YA L
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKL-------ILHCAISISDALPYARRLL 62
Query: 66 RQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLR-GSHRSDALTCSFALKACARVLAL 124
P FN ++RG + S +P N+V + +M+R G D+ + +F +KA +L
Sbjct: 63 LCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSL 122
Query: 125 FETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGL 184
Q+H L+HG + +GTTL+ +Y G + A+KVFDEM ++ +WNA+I
Sbjct: 123 RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC 182
Query: 185 AQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMN 244
+GN + A ++F +M L N
Sbjct: 183 FRGNDVAGAREIFDKM----------------------------------------LVRN 202
Query: 245 VVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMG 304
N ++ Y K G L+ A +F + R V+W+TM++ A +G + F ++
Sbjct: 203 HTSWNVMLAGYIKAGELESAKRIFSEMPHRDD-VSWSTMIVGIAHNGSFNESFLYFRELQ 261
Query: 305 RAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQ 364
RAG+ P++VS L AC+ +G + G L + G + +++D+ R G +
Sbjct: 262 RAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVP 321
Query: 365 EACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMA 398
A + + + +V W +++ ++G E A
Sbjct: 322 MARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/525 (38%), Positives = 315/525 (60%), Gaps = 14/525 (2%)
Query: 61 AHALFRQINAPSTNDFNAVLRGLAHSSKPTNA-VLWYRQMLRGSHRSDALTCSFALKACA 119
A + F ++ +N ++ G A + A L+Y M + +A+ + C
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYI--ECG 200
Query: 120 RVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGV-RDIASWN 178
L+ SH + + + T ++ Y K ++ A+ +F +M V +++ +WN
Sbjct: 201 -------DLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWN 253
Query: 179 ALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIRE 238
A+I+G + + + + LF+ M EG+ +PN + AL C L A + G +IH+ + +
Sbjct: 254 AMISGYVENSRPEDGLKLFRAMLEEGI-RPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 239 ERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALE 298
L +V ++I MY KCG L A+++F+ +K +K +V WN M+ +A HG+ +AL
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMK-KKDVVAWNAMISGYAQHGNADKALC 371
Query: 299 LFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMA-NCGVKPNMKHYGSVVDLL 357
LF +M ++PD ++++A L ACNHAGLV+ G+ F SM + V+P HY +VDLL
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 358 GRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFV 417
GRAG+L+EA +++S+ ++ TLLGAC+++ +VE+AE A+ KL+++ S N +V
Sbjct: 432 GRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 491
Query: 418 LLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYE 477
L+N+YA+ RW+DV RVRK MK +V KVPG+S+IE+ +H F +SD+ H + I++
Sbjct: 492 QLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHK 551
Query: 478 KLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFK 537
KL E+ K+K GY LH++ EE+KE L +HSEKLAVAFG I + + IQVFK
Sbjct: 552 KLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFK 611
Query: 538 NLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
NLRIC DCH IK IS++ REIIVRD RFH FKDG+CSC DYW
Sbjct: 612 NLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/561 (36%), Positives = 324/561 (57%), Gaps = 8/561 (1%)
Query: 23 KQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFRQINAPSTNDFNAVLRG 82
K++ + +G F S L + + +++ YA L A LF + + +N+++
Sbjct: 256 KEIHGYAMRSG-FDS-LVNISTALVDMYA--KCGSLETARQLFDGMLERNVVSWNSMIDA 311
Query: 83 LAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLAD 142
+ P A+L +++ML + ++ AL ACA + L IH + G +
Sbjct: 312 YVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRN 371
Query: 143 ALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKM 202
+ +L+ +Y K E+ +A +F ++ R + SWNA+I G AQ +A++ F +M+
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS 431
Query: 203 EGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLD 262
V KP+ T + + A L IH + LD NV V A++DMYAKCG +
Sbjct: 432 RTV-KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIM 490
Query: 263 KAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCAC 322
A +FD + + + TWN M+ + HG G ALELFE+M + +KP+ V++L+ + AC
Sbjct: 491 IARLIFD-MMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 549
Query: 323 NHAGLVDDGVRLFNSMA-NCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVL 381
+H+GLV+ G++ F M N ++ +M HYG++VDLLGRAGRL EA D + + + + +
Sbjct: 550 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 609
Query: 382 WQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKN 441
+ +LGACQ++ +V AE A+ +L E+ ++ G VLL+N+Y A W+ VG+VR +M
Sbjct: 610 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 669
Query: 442 RDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHD 501
+ ++K PG S +E+ +H FF+ +H ++IY L++++ IKE GY T+ VL
Sbjct: 670 QGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-G 728
Query: 502 IGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREII 561
+ + KE L HSEKLA++FGL++T+ T+I V KNLR+C DCH+ K IS V REI+
Sbjct: 729 VENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIV 788
Query: 562 VRDRVRFHRFKDGACSCKDYW 582
VRD RFH FK+GACSC DYW
Sbjct: 789 VRDMQRFHHFKNGACSCGDYW 809
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 189/380 (49%), Gaps = 12/380 (3%)
Query: 7 LLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHALFR 66
LL++CSS ++Q+ + G +Q F ++K++ + + A +F
Sbjct: 43 LLERCSSLK-----ELRQILPLVFKNGLYQEHFF--QTKLVSLFC--RYGSVDEAARVFE 93
Query: 67 QINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFE 126
I++ ++ +L+G A S A+ ++ +M ++ LK C L
Sbjct: 94 PIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRV 153
Query: 127 TLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQ 186
+IH +++ GF D T L ++YAK ++ A+KVFD M RD+ SWN ++AG +Q
Sbjct: 154 GKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQ 213
Query: 187 GNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVV 246
+A A+++ K M E + KP+ +T++ L A L G +IH Y D V
Sbjct: 214 NGMARMALEMVKSMCEENL-KPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN 272
Query: 247 VCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRA 306
+ A++DMYAKCG L+ A ++FD + +++V+WN+M+ A+ + + A+ +F++M
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE 331
Query: 307 GVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEA 366
GVKP DVS + AL AC G ++ G + G+ N+ S++ + + + A
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 367 CDIVKSVSMGTDMVLWQTLL 386
+ + T +V W ++
Sbjct: 392 ASMFGKLQSRT-LVSWNAMI 410
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/430 (42%), Positives = 277/430 (64%), Gaps = 8/430 (1%)
Query: 159 IVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALA 218
++ K +F +MG + + SWN +I + + EAV+L+ RM+ +G F+P+ V++ L
Sbjct: 259 VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADG-FEPDAVSITSVLP 317
Query: 219 ACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLV 278
ACG A G KIH YI ++L N+++ NA+IDMYAKCG L+KA +VF+N+K R +V
Sbjct: 318 ACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSR-DVV 376
Query: 279 TWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSM 338
+W M+ A+ G G A+ LF ++ +G+ PD ++++ L AC+HAGL+++G F M
Sbjct: 377 SWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLM 436
Query: 339 AN-CGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEM 397
+ + P ++H +VDLLGRAG+++EA ++ +SM + +W LLGAC+++ D ++
Sbjct: 437 TDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDI 496
Query: 398 AEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGG 457
+A+ KL ++ G +VLLSN+YA RW++V +R MK++ +KK PG S +EV
Sbjct: 497 GLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNR 556
Query: 458 VIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEK 517
+IH F D+SH + EIY +LD ++ K+KE GY + LHD+ EE+KE L HSEK
Sbjct: 557 IIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEK 616
Query: 518 LAVAFGLISTSEA-----TSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFK 572
LA+ F L++T E +I++ KNLRIC DCH KLIS++ +REII+RD RFH F+
Sbjct: 617 LAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFR 676
Query: 573 DGACSCKDYW 582
G CSC DYW
Sbjct: 677 FGVCSCGDYW 686
Score = 102 bits (254), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 152/343 (44%), Gaps = 36/343 (10%)
Query: 51 ALSPLNELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALT 110
A + L ++A A +F +I + N ++R ++ V + M + R D T
Sbjct: 83 AYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYT 142
Query: 111 CSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMG 170
LKAC+ + +IH + G + +G L+ +Y K G + A+ V DEM
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 202
Query: 171 VRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGD 230
RD+ SWN+L+ G AQ +A+++ + +ME V ++ + +L
Sbjct: 203 RRDVVSWNSLVVGYAQNQRFDDALEVCR--EMESVKISHDAGTMASLLPA---------- 250
Query: 231 KIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVH 290
+ E NV+ V DM+ K G +KSLV+WN M+ + +
Sbjct: 251 -VSNTTTE-----NVMY---VKDMFFKMG--------------KKSLVSWNVMIGVYMKN 287
Query: 291 GDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHY 350
A+EL+ +M G +PD VS + L AC + G ++ + + PN+
Sbjct: 288 AMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
Query: 351 GSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYG 393
+++D+ + G L++A D+ +++ D+V W ++ A G
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMK-SRDVVSWTAMISAYGFSG 389
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 133/289 (46%), Gaps = 5/289 (1%)
Query: 60 YAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACA 119
Y +F ++ S +N ++ ++ P AV Y +M DA++ + L AC
Sbjct: 261 YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 120 RVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNA 179
AL +IH ++ R + + LL L+D+YAK G + A+ VF+ M RD+ SW A
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 180 LIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREE 239
+I+ +AV LF +++ G+ P+ + + LAAC H G +EG + + +
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQDSGLV-PDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 240 -RLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALE 298
++ + ++D+ + G + +A+ ++ + W ++ A VH D L
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 299 LFEQMGRAGVKPDDVSYLAALCAC-NHAGLVDDGVRLFNSMANCGVKPN 346
+++ + + P+ Y L AG ++ + N M + G+K N
Sbjct: 500 AADKLFQ--LAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 130 IHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNL 189
+HS ++ ++ LG L+ YA + ++ SA+KVFDE+ R++ N +I
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 190 ASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCN 249
E V +F M V +P+ T L AC G G KIH + L + V N
Sbjct: 121 YGEGVKVFGTMCGCNV-RPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGN 179
Query: 250 AVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVK 309
++ MY KCG L +A V D + R+ +V+WN++V+ +A + ALE+ +M +
Sbjct: 180 GLVSMYGKCGFLSEARLVLDEMS-RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKIS 238
Query: 310 PD 311
D
Sbjct: 239 HD 240
>sp|Q9LTF4|PP429_ARATH Putative pentatricopeptide repeat-containing protein At5g52630
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 588
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/562 (36%), Positives = 333/562 (59%), Gaps = 6/562 (1%)
Query: 22 IKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAY-AHALFRQINAPSTNDFNAVL 80
IK LQ H S + V + +I FY+ S +L + + F S+ +++++
Sbjct: 32 IKGLQLHGYVVKSGLSLIPLVANNLINFYSKS---QLPFDSRRAFEDSPQKSSTTWSSII 88
Query: 81 RGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFL 140
A + P ++ + ++M+ G+ R D A K+CA + +H ++ G+
Sbjct: 89 SCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYD 148
Query: 141 ADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRM 200
AD +G++L+D+YAK GEIV A+K+FDEM R++ +W+ ++ G AQ EA+ LFK
Sbjct: 149 ADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEA 208
Query: 201 KMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGL 260
E + N+ + ++ C + + G +IH + D + V ++++ +Y+KCG+
Sbjct: 209 LFENL-AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGV 267
Query: 261 LDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALC 320
+ A++VF+ + K+L WN M+ A+A H + +ELF++M +G+KP+ +++L L
Sbjct: 268 PEGAYQVFNEVPV-KNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLN 326
Query: 321 ACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMV 380
AC+HAGLVD+G F+ M ++P KHY S+VD+LGRAGRLQEA +++ ++ +
Sbjct: 327 ACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTES 386
Query: 381 LWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMK 440
+W LL +C ++ + E+A A+ K+ E+G + G + LSN YAA R++D + RK ++
Sbjct: 387 VWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLR 446
Query: 441 NRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLH 500
+R KK G S++E +H F ++ H K +EIYEKL E+ ++++ GY A TS VL
Sbjct: 447 DRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLR 506
Query: 501 DIGEEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREI 560
++ +EK + YHSE+LA+AFGLI+ I+V KNLR+C DCH+ IK +S R I
Sbjct: 507 EVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVI 566
Query: 561 IVRDRVRFHRFKDGACSCKDYW 582
IVRD RFHRF+DG CSC DYW
Sbjct: 567 IVRDNNRFHRFEDGKCSCNDYW 588
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 138/274 (50%), Gaps = 3/274 (1%)
Query: 115 LKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDI 174
L + AR + + LQ+H +V++ G L+ L++ Y+K +++ F++ +
Sbjct: 22 LLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSS 81
Query: 175 ASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHE 234
+W+++I+ AQ L +++ K+M M G +P++ + A +C L G +H
Sbjct: 82 TTWSSIISCFAQNELPWMSLEFLKKM-MAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 235 YIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGP 294
+ D +V V ++++DMYAKCG + A ++FD + ++++VTW+ M+ +A G+
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-QRNVVTWSGMMYGYAQMGENE 199
Query: 295 RALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVV 354
AL LF++ + +D S+ + + C ++ L++ G ++ + S+V
Sbjct: 200 EALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLV 259
Query: 355 DLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGA 388
L + G + A + V + ++ +W +L A
Sbjct: 260 SLYSKCGVPEGAYQVFNEVPV-KNLGIWNAMLKA 292
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/559 (35%), Positives = 317/559 (56%), Gaps = 33/559 (5%)
Query: 56 NELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFAL 115
N + A LF + A + + NA+ A+ + M+ R D ++ A+
Sbjct: 285 NAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAI 344
Query: 116 KACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKV------------------- 156
+C+++ + H +VLR+GF + + L+D+Y K
Sbjct: 345 SSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV 404
Query: 157 ------------GEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEG 204
GE+ +A + F+ M ++I SWN +I+GL QG+L EA+++F M+ +
Sbjct: 405 TWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQE 464
Query: 205 VFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKA 264
+ VT++ +ACGHLGA I+ YI + + ++V + ++DM+++CG + A
Sbjct: 465 GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Query: 265 FEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNH 324
+F+++ R + W + A A+ G+ RA+ELF+ M G+KPD V+++ AL AC+H
Sbjct: 525 MSIFNSLTNR-DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSH 583
Query: 325 AGLVDDGVRLFNSMANC-GVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQ 383
GLV G +F SM GV P HYG +VDLLGRAG L+EA +++ + M + V+W
Sbjct: 584 GGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWN 643
Query: 384 TLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRD 443
+LL AC++ G+VEMA A+ K+ + G +VLLSN+YA+ RW+D+ +VR +MK +
Sbjct: 644 SLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKG 703
Query: 444 VKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIG 503
++K PG S I++ G H+F + D+SH + I LDE+ + G+ S VL D+
Sbjct: 704 LRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVD 763
Query: 504 EEEKENALCYHSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVR 563
E+EK L HSEKLA+A+GLIS+++ T+I++ KNLR+C DCH K SKVYNREII+R
Sbjct: 764 EKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILR 823
Query: 564 DRVRFHRFKDGACSCKDYW 582
D RFH + G CSC D+W
Sbjct: 824 DNNRFHYIRQGKCSCGDFW 842
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 185/359 (51%), Gaps = 25/359 (6%)
Query: 52 LSPLNELAYAHALFRQINAPSTN-DFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALT 110
L L++A +F + T +N+++RG A S A+L + +M+ D T
Sbjct: 77 LGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYT 136
Query: 111 CSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMG 170
F L ACA+ A +QIH +++ G+ D + +L+ YA+ GE+ SA+KVFDEM
Sbjct: 137 FPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS 196
Query: 171 VRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGD 230
R++ SW ++I G A+ + A +AVDLF RM + PN VT++ ++AC L + G+
Sbjct: 197 ERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGE 256
Query: 231 KIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVH 290
K++ +IR +++N ++ +A++DMY KC +D A +FD +L N M +
Sbjct: 257 KVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGA-SNLDLCNAMASNYVRQ 315
Query: 291 GDGPRALELFEQMGRAGVKPDDVSYLAALCACN-----------HAGLVDDGVRLFNSMA 339
G AL +F M +GV+PD +S L+A+ +C+ H ++ +G ++++
Sbjct: 316 GLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 375
Query: 340 NCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMA 398
N +++D+ + R A I +S T +V W +++ G+V+ A
Sbjct: 376 N-----------ALIDMYMKCHRQDTAFRIFDRMSNKT-VVTWNSIVAGYVENGEVDAA 422
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/528 (37%), Positives = 310/528 (58%), Gaps = 4/528 (0%)
Query: 57 ELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALK 116
+L A +F ++ +NA++ GL + +R+M D T
Sbjct: 125 DLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFS 184
Query: 117 ACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIAS 176
A + ++ QIH + +++G D ++ ++L +Y + G++ + V M VR++ +
Sbjct: 185 GSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVA 244
Query: 177 WNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYI 236
WN LI G AQ + L+K MK+ G +PN++T + L++C L +G +IH
Sbjct: 245 WNTLIMGNAQNGCPETVLYLYKMMKISGC-RPNKITFVTVLSSCSDLAIRGQGQQIHAEA 303
Query: 237 REERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRA 296
+ V V +++I MY+KCG L A + F + + V W++M+ A+ HG G A
Sbjct: 304 IKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSE-REDEDEVMWSSMISAYGFHGQGDEA 362
Query: 297 LELFEQMG-RAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMAN-CGVKPNMKHYGSVV 354
+ELF M + ++ ++V++L L AC+H+GL D G+ LF+ M G KP +KHY VV
Sbjct: 363 IELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVV 422
Query: 355 DLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCG 414
DLLGRAG L +A I++S+ + TD+V+W+TLL AC ++ + EMA+ ++++++ N+
Sbjct: 423 DLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSA 482
Query: 415 DFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWRE 474
+VLL+N++A+ +RW DV VRK+M++++VKK G S+ E G +H+F D+S K +E
Sbjct: 483 CYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKE 542
Query: 475 IYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQ 534
IY L E+ ++K GY T+ VLHD+ EEEKE+ L HSEKLAVAF L+ E I+
Sbjct: 543 IYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIR 602
Query: 535 VFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
+ KNLR+C DCH K IS + NREI +RD RFH F +G CSC DYW
Sbjct: 603 IIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 156/341 (45%), Gaps = 34/341 (9%)
Query: 115 LKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKV------------------ 156
+++C +L Q+H ++ GF +D + L+ +Y+K+
Sbjct: 51 IQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNY 110
Query: 157 -------------GEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKME 203
G++V+A+KVFDEM R + +WNA+IAGL Q E + LF+ M
Sbjct: 111 MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGL 170
Query: 204 GVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDK 263
G F P+E T+ + L + G +IH Y + L++++VV +++ MY + G L
Sbjct: 171 G-FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQD 229
Query: 264 AFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACN 323
V ++ R +LV WNT++M A +G L L++ M +G +P+ ++++ L +C+
Sbjct: 230 GEIVIRSMPVR-NLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCS 288
Query: 324 HAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQ 383
+ G ++ G + S++ + + G L +A S D V+W
Sbjct: 289 DLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF-SEREDEDEVMWS 347
Query: 384 TLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYA 424
+++ A +G + A + E + + L+ LYA
Sbjct: 348 SMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 388
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 43/235 (18%)
Query: 185 AQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMN 244
++GNL + F+R ++ +F N + +C + G ++H + +
Sbjct: 25 SKGNLR----EAFQRFRL-NIFT-NTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSD 78
Query: 245 VVVCNAVIDMYAKCGLLDKAF-------------------------------EVFDNIKC 273
+CN ++ MY+K G A +VFD +
Sbjct: 79 KFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPD 138
Query: 274 RKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGL--VDDG 331
RK L TWN M+ L LF +M G PD+ Y AGL V G
Sbjct: 139 RK-LTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDE--YTLGSVFSGSAGLRSVSIG 195
Query: 332 VRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLL 386
++ G++ ++ S+ + R G+LQ+ +++S+ + ++V W TL+
Sbjct: 196 QQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPV-RNLVAWNTLI 249
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 293/446 (65%), Gaps = 9/446 (2%)
Query: 144 LLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKME 203
+ T ++ Y+K G + A+ +FD+ +D+ W +I+ + + EA+ +F+ M
Sbjct: 279 FVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCS 338
Query: 204 GVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDK 263
G+ KP+ V++ ++AC +LG + +H I L+ + + NA+I+MYAKCG LD
Sbjct: 339 GI-KPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDA 397
Query: 264 AFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACN 323
+VF+ + R+++V+W++M+ A ++HG+ AL LF +M + V+P++V+++ L C+
Sbjct: 398 TRDVFEKMP-RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCS 456
Query: 324 HAGLVDDGVRLFNSMAN-CGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLW 382
H+GLV++G ++F SM + + P ++HYG +VDL GRA L+EA ++++S+ + +++V+W
Sbjct: 457 HSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIW 516
Query: 383 QTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNR 442
+L+ AC+++G++E+ + A+++++E+ ++ G VL+SN+YA +RW+DV +R+ M+ +
Sbjct: 517 GSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEK 576
Query: 443 DVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDI 502
+V K G S I+ G H+F DK H + EIY KLDE++ K+K GY VL D+
Sbjct: 577 NVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDV 636
Query: 503 GEEEKENALCYHSEKLAVAFGLISTSEATS------IQVFKNLRICRDCHDVIKLISKVY 556
EEEK++ + +HSEKLA+ FGL++ + I++ KNLR+C DCH KL+SKVY
Sbjct: 637 EEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVY 696
Query: 557 NREIIVRDRVRFHRFKDGACSCKDYW 582
REIIVRDR RFH +K+G CSC+DYW
Sbjct: 697 EREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 211/423 (49%), Gaps = 43/423 (10%)
Query: 5 NALLQKCSSNGAVSHIHIKQLQAHLTTTGQFQSKLFPVRSKIIEFYALSPLNELAYAHAL 64
N +L+K S +++HI KQL AH+ T KL S + S L+YA +
Sbjct: 13 NTILEKLSFCKSLNHI--KQLHAHILRT-VINHKL---NSFLFNLSVSSSSINLSYALNV 66
Query: 65 FRQINAPSTND-FNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACARVLA 123
F I +P + FN LR L+ SS+P +L+Y+++ R D + LKA ++V A
Sbjct: 67 FSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSA 126
Query: 124 LFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAG 183
LFE +++H + L D + T +D+YA G I A+ VFDEM RD+ +WN +I
Sbjct: 127 LFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIER 186
Query: 184 LAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDM 243
+ L EA LF+ MK V P+E+ + ++ACG G + I+E++ E + M
Sbjct: 187 YCRFGLVDEAFKLFEEMKDSNVM-PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 245
Query: 244 -------------------------------NVVVCNAVIDMYAKCGLLDKAFEVFDNIK 272
N+ V A++ Y+KCG LD A +FD +
Sbjct: 246 DTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 273 CRKSLVTWNTMVMAFAVHGDGPR-ALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDG 331
+K LV W TM+ A+ V D P+ AL +FE+M +G+KPD VS + + AC + G++D
Sbjct: 306 -KKDLVCWTTMISAY-VESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363
Query: 332 VRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQL 391
+ + + G++ + +++++ + G L D+ + + ++V W +++ A +
Sbjct: 364 KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR-RNVVSWSSMINALSM 422
Query: 392 YGD 394
+G+
Sbjct: 423 HGE 425
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 122/233 (52%), Gaps = 2/233 (0%)
Query: 61 AHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALKACAR 120
A +F Q + ++ S P A+ + +M + D ++ + ACA
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 121 VLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNAL 180
+ L + +HS + +G ++ + L+++YAK G + + + VF++M R++ SW+++
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM 416
Query: 181 IAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREE- 239
I L+ AS+A+ LF RMK E V +PNEVT +G L C H G +EG KI + +E
Sbjct: 417 INALSMHGEASDALSLFARMKQENV-EPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 475
Query: 240 RLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGD 292
+ + ++D++ + LL +A EV +++ ++V W +++ A +HG+
Sbjct: 476 NITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGE 528
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/429 (42%), Positives = 276/429 (64%), Gaps = 5/429 (1%)
Query: 157 GEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGA 216
GEI A++VFD M R+ ASW +I + EA+DLF M+ +GV +P T++
Sbjct: 279 GEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV-RPTFPTLISI 337
Query: 217 LAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKS 276
L+ C L + G ++H + + D++V V + ++ MY KCG L K+ +FD K
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS-KD 396
Query: 277 LVTWNTMVMAFAVHGDGPRALELFEQMGRAG-VKPDDVSYLAALCACNHAGLVDDGVRLF 335
++ WN+++ +A HG G AL++F +M +G KP++V+++A L AC++AG+V++G++++
Sbjct: 397 IIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Query: 336 NSMANC-GVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGD 394
SM + GVKP HY +VD+LGRAGR EA +++ S+++ D +W +LLGAC+ +
Sbjct: 457 ESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQ 516
Query: 395 VEMAEIASRKLVEMGSNNCGDFVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIE 454
+++AE ++KL+E+ N G ++LLSN+YA+ RW DV +RK MK R V+K PG S+ E
Sbjct: 517 LDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTE 576
Query: 455 VGGVIHKFFTSD-KSHVKWREIYEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCY 513
V +H F SH + I + LDE+ ++E GY S LHD+ EEEK N+L Y
Sbjct: 577 VENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKY 636
Query: 514 HSEKLAVAFGLISTSEATSIQVFKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKD 573
HSE+LAVA+ L+ SE I+V KNLR+C DCH IK+ISKV REII+RD RFH F++
Sbjct: 637 HSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRN 696
Query: 574 GACSCKDYW 582
G CSCKDYW
Sbjct: 697 GECSCKDYW 705
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 3/237 (1%)
Query: 57 ELAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLRGSHRSDALTCSFALK 116
E+A A +F + + + V++ + A+ + M + R T L
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 117 ACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIAS 176
CA + +L Q+H+ ++R F D + + L+ +Y K GE+V +K +FD +DI
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 177 WNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYI 236
WN++I+G A L EA+ +F M + G KPNEVT + L+AC + G +EG KI+E +
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Query: 237 REERLDMNVVVCN--AVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHG 291
E + + + ++DM + G ++A E+ D++ W +++ A H
Sbjct: 460 -ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHS 515
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 127/286 (44%), Gaps = 17/286 (5%)
Query: 142 DALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMK 201
D + T+++ K G + A+++FDEM R + +W ++ G Q N +A +F M
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 202 MEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLL 261
+ EV+ L G ++ +++ E + + V+ CNA+I + G +
Sbjct: 231 -----EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVK----PVIACNAMISGLGQKGEI 281
Query: 262 DKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCA 321
KA VFD++K R +W T++ +G AL+LF M + GV+P + ++ L
Sbjct: 282 AKARRVFDSMKERND-ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSV 340
Query: 322 CNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVL 381
C + G ++ + C ++ ++ + + G L ++ I D+++
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFP-SKDIIM 399
Query: 382 WQTLLGACQLYGDVEMAEIASRKLVEM---GSNNCGDFVLLSNLYA 424
W +++ +G + E A + EM GS + ++ L A
Sbjct: 400 WNSIISGYASHG---LGEEALKVFCEMPLSGSTKPNEVTFVATLSA 442
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 19/238 (7%)
Query: 149 LLDVYAKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKP 208
L+ Y K GEI A+KVFD M R++ SW AL+ G A LF +M +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP-----EK 139
Query: 209 NEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVF 268
N+V+ L G + K++E I D + + ++I K G +D+A E+F
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEAREIF 195
Query: 269 DNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLV 328
D + R S++TW TMV + + A ++F+ M + +VS+ + L G +
Sbjct: 196 DEMSER-SVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRI 250
Query: 329 DDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLL 386
+D LF M VKP + +++ LG+ G + +A + S+ D WQT++
Sbjct: 251 EDAEELFEVMP---VKPVIA-CNAMISGLGQKGEIAKARRVFDSMKERND-ASWQTVI 303
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 19/246 (7%)
Query: 154 AKVGEIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTV 213
+++G+I A+K+FD + I+SWN+++AG + +A LF M + N
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWN---- 83
Query: 214 LGALAACGHLGAWKEGDKIHEYIREERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKC 273
G ++ G E K+ + + E NVV A++ Y G +D A +F +
Sbjct: 84 -GLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKMP- 137
Query: 274 RKSLVTWNTMVMAFAVHGDGPRALELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVR 333
K+ V+W M++ F G A +L+E + D+++ + + G VD+
Sbjct: 138 EKNKVSWTVMLIGFLQDGRIDDACKLYEMIP----DKDNIARTSMIHGLCKEGRVDEARE 193
Query: 334 LFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYG 393
+F+ M+ V + ++V G+ R+ +A I + T+ V W ++L G
Sbjct: 194 IFDEMSERSVIT----WTTMVTGYGQNNRVDDARKIFDVMPEKTE-VSWTSMLMGYVQNG 248
Query: 394 DVEMAE 399
+E AE
Sbjct: 249 RIEDAE 254
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/527 (36%), Positives = 303/527 (57%), Gaps = 4/527 (0%)
Query: 58 LAYAHALFRQINAPSTNDFNAVLRGLAHSSKPTNAVLWYRQMLR-GSHRSDALTCSFALK 116
L A LF ++ + + A++ G +P A++ Y M R + R + T S A+
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVA 226
Query: 117 ACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVGEIVSAKKVFDEMGVRDIAS 176
A A V + +IH H++R G +D +L ++L+D+Y K G I A+ +FD++ +D+ S
Sbjct: 227 AAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVS 286
Query: 177 WNALIAGLAQGNLASEAVDLFKRMKMEGVFKPNEVTVLGALAACGHLGAWKEGDKIHEYI 236
W ++I + + E LF + + +PNE T G L AC L + G ++H Y+
Sbjct: 287 WTSMIDRYFKSSRWREGFSLFSEL-VGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 237 REERLDMNVVVCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRA 296
D ++++DMY KCG ++ A V D + LV+W +++ A +G A
Sbjct: 346 TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPDEA 404
Query: 297 LELFEQMGRAGVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCG-VKPNMKHYGSVVD 355
L+ F+ + ++G KPD V+++ L AC HAGLV+ G+ F S+ + HY +VD
Sbjct: 405 LKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVD 464
Query: 356 LLGRAGRLQEACDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGD 415
LL R+GR ++ ++ + M LW ++LG C YG++++AE A+++L ++ N
Sbjct: 465 LLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVT 524
Query: 416 FVLLSNLYAAYERWDDVGRVRKAMKNRDVKKVPGFSYIEVGGVIHKFFTSDKSHVKWREI 475
+V ++N+YAA +W++ G++RK M+ V K PG S+ E+ H F +D SH + +I
Sbjct: 525 YVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQI 584
Query: 476 YEKLDEIMFKIKEYGYAAGTSCVLHDIGEEEKENALCYHSEKLAVAFGLISTSEATSIQV 535
E L E+ K+KE GY TS VLHD+ +E+KE L YHSEKLAVAF ++ST E T+I+V
Sbjct: 585 VEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKV 644
Query: 536 FKNLRICRDCHDVIKLISKVYNREIIVRDRVRFHRFKDGACSCKDYW 582
FKNLR C DCH IK IS + R+I VRD RFH F++G CSC DYW
Sbjct: 645 FKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 166/359 (46%), Gaps = 35/359 (9%)
Query: 98 QMLRGSHRSDALTCSFALKACARVLALFETLQIHSHVLRHGFLADALLGTTLLDVYAKVG 157
Q+L + + A T ++ C++ AL E ++H H+ GF+ ++ LL +YAK G
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCG 134
Query: 158 EIVSAKKVFDEMGVRDIASWNALIAGLAQGNLASEAVDLFKRMKMEGVF----------- 206
+V A+KVFDEM RD+ SWN ++ G A+ L EA LF M + +
Sbjct: 135 SLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVK 194
Query: 207 --------------------KPNEVTVLGALAACGHLGAWKEGDKIHEYIREERLDMNVV 246
+PN TV A+AA + + G +IH +I LD + V
Sbjct: 195 KDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEV 254
Query: 247 VCNAVIDMYAKCGLLDKAFEVFDNIKCRKSLVTWNTMVMAFAVHGDGPRALELFEQMGRA 306
+ ++++DMY KCG +D+A +FD I K +V+W +M+ + LF ++ +
Sbjct: 255 LWSSLMDMYGKCGCIDEARNIFDKI-VEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 307 GVKPDDVSYLAALCACNHAGLVDDGVRLFNSMANCGVKPNMKHYGSVVDLLGRAGRLQEA 366
+P++ ++ L AC + G ++ M G P S+VD+ + G ++ A
Sbjct: 314 CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESA 373
Query: 367 CDIVKSVSMGTDMVLWQTLLGACQLYGDVEMAEIASRKLVEMGSNNCGDFVLLSNLYAA 425
+V D+V W +L+G C G + A L++ G+ D V N+ +A
Sbjct: 374 KHVVDGCPK-PDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTK--PDHVTFVNVLSA 429
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 209,894,147
Number of Sequences: 539616
Number of extensions: 8641175
Number of successful extensions: 26583
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 19842
Number of HSP's gapped (non-prelim): 1826
length of query: 582
length of database: 191,569,459
effective HSP length: 123
effective length of query: 459
effective length of database: 125,196,691
effective search space: 57465281169
effective search space used: 57465281169
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)