BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>008001
MFVSMFKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDP
VFAMTLRYLISIHKEFCFHQGVPSPISDLTDRLLLEERDPPATPQESLYEAPPFDEVDIQ
ALAHAVKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGL
STPSGTQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTD
VISIQGADVELRFTGGPTGSNEDCSTSGSHQPESSRVLRSRSHGSGERNKRKRWRERQDD
FCYNPEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVLGMKELAGKGMAAEAVEEINA
MDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAHLGPLAASHPALLKPLKETLL
ALLQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMKILRATLHTHNEWFKLQMCKD
RFESLLRIDLLKEVYTPFLATVAMSKSHADSTQGSSQITISSNARVSEDGSSPNQVSSAD
FVCDENAILKVMEFLALPRADAIHLLAQYNGNAETVIQQIFA

High Scoring Gene Products

Symbol, full name Information P value
AT5G66810 protein from Arabidopsis thaliana 4.0e-90

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  008001
        (582 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2175014 - symbol:AT5G66810 "AT5G66810" species...   899  4.0e-90   1


>TAIR|locus:2175014 [details] [associations]
            symbol:AT5G66810 "AT5G66810" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0006486 "protein glycosylation" evidence=RCA]
            [GO:0006623 "protein targeting to vacuole" evidence=RCA]
            [GO:0016192 "vesicle-mediated transport" evidence=RCA]
            EMBL:CP002688 InterPro:IPR024964 Pfam:PF10607 PROSITE:PS50897
            InterPro:IPR006595 SMART:SM00668 IPI:IPI00522103 RefSeq:NP_201482.2
            UniGene:At.28848 PRIDE:F4K250 EnsemblPlants:AT5G66810.1
            GeneID:836814 KEGG:ath:AT5G66810 OMA:DAYPEAY ArrayExpress:F4K250
            Uniprot:F4K250
        Length = 750

 Score = 899 (321.5 bits), Expect = 4.0e-90, P = 4.0e-90
 Identities = 184/304 (60%), Positives = 225/304 (74%)

Query:     6 FKEAYEEFKHVLLTFIYDKDDPTSPVAIEWAERRRFEIAGLMSSVLRAHLHAYDPVFAMT 65
             + EAYEEFKHVLL  IYDKDD TSPVA EWAE+RR+E+AGLMSSVLRA L AYDPVF+MT
Sbjct:   186 YPEAYEEFKHVLLALIYDKDDQTSPVANEWAEKRRYEMAGLMSSVLRASLQAYDPVFSMT 245

Query:    66 LRYLISIHKEFCFHQGVPSPISXXXXXXXXXXXXPPATPQESLYEAPPFDEVDIQALAHA 125
             LRYLISIHK FCFHQG+ S +S             PATP ES+YE PPFDEVDIQALAHA
Sbjct:   246 LRYLISIHKGFCFHQGISSAVSDLTHRLLLEERDAPATPIESMYEVPPFDEVDIQALAHA 305

Query:   126 VKITRQGAVDSLRFARGDLFQAFQNELCQMRLDVSMLDELVREYCVYRGIVDSGLSTPSG 185
             V++TRQGAVDS++FA+GDLFQAFQNELC+MRLDVS+LDELV+EYC+YRGIVDS +     
Sbjct:   306 VELTRQGAVDSMKFAKGDLFQAFQNELCRMRLDVSVLDELVKEYCIYRGIVDSEM----- 360

Query:   186 TQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSDGETSVSNTIMDGSPENNTDVISIQ 245
              Q I+IP K ++ E G   SR+CS E+D + S++SD E   + +++DGS   +T++   +
Sbjct:   361 -QMITIPAKRNQSEVGRSLSRDCSSEIDLNTSQHSDIENYSNKSMLDGSLTYDTEMSCEE 419

Query:   246 GADVELRFTGGPTGSNEDCSTSGSHQPESSR-VLRSRSHGSGERNKRKRWRERQDDFCYN 304
             G DV  R+   PT   EDCSTS S+Q E++R +LR RSH + E NKRKRW  R  +    
Sbjct:   420 GGDVGTRYGSEPTSVCEDCSTSWSNQCENTRALLRIRSHMNSEGNKRKRWCGRTAEMDCL 479

Query:   305 PEIS 308
             P IS
Sbjct:   480 PRIS 483

 Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
 Identities = 201/427 (47%), Positives = 262/427 (61%)

Query:   162 LDELVREYCVYRGIVDSGLSTPSGTQTISIPIKVDKPESGCCSSRNCSLEMDCSISKNSD 221
             LD  V +  V    +  G+   S  Q I+IP K ++ E G   SR+CS E+D + S++SD
Sbjct:   337 LDVSVLDELVKEYCIYRGI-VDSEMQMITIPAKRNQSEVGRSLSRDCSSEIDLNTSQHSD 395

Query:   222 GETSVSNTIMDGSPENNTDVISIQGADVELRFTGGPTGSNEDCSTSGSHQPESSR-VLRS 280
              E   + +++DGS   +T++   +G DV  R+   PT   EDCSTS S+Q E++R +LR 
Sbjct:   396 IENYSNKSMLDGSLTYDTEMSCEEGGDVGTRYGSEPTSVCEDCSTSWSNQCENTRALLRI 455

Query:   281 RSHGSGERNKRKRWRERQDDFCYNPEISLGGCNKRELNSSTLIPSTIMSREQQENYEIVL 340
             RSH + E NKRKRW  R  +    P IS          S T   + I     ++ YEI L
Sbjct:   456 RSHMNSEGNKRKRWCGRTAEMDCLPRISFANSE-----SGT---NPI-----EDKYEIAL 502

Query:   341 GMKELAGKGMAAEAVEEINAMDADFFVQNPMLLFQLKQVEFLKLVSCGDHSGALRVACAH 400
              +KEL  +GMAAEA  EI+ MD DFF QNP LLF LKQVEFLKLVS GDH+GAL+VAC H
Sbjct:   503 ALKELVSRGMAAEAFSEISTMDPDFFTQNPGLLFHLKQVEFLKLVSAGDHNGALKVACFH 562

Query:   401 LGPLAASHXXXXXXXXXXXXXXXQPNEDVLVKGFPLHTLATSLQVAIGRRLGIEEPQLMK 460
             LGPLAA+                QP+     K  PL+ LA +LQV++G RLGIEEP+LMK
Sbjct:   563 LGPLAANDQSLLKTLKETLLVLLQPDGTAPGKDLPLNDLANTLQVSVGNRLGIEEPKLMK 622

Query:   461 ILRATLHTHNEWFKLQMCKDRFESLLRIDLLKEVYTPFLATV-AMSKSHADXXXXXXXXX 519
             I++ATLHTH EWFKLQMCKDRF +LL+ID LKEV T  +  + + SK  ++         
Sbjct:   623 IIKATLHTHTEWFKLQMCKDRFNNLLKIDSLKEVNTDLIGAIKSKSKKDSNTNLSSQVTT 682

Query:   520 XXXNARVSEDGSSPN-----QVSSADFVCDENAILKVMEFLALPRADAIHLLAQYNGNAE 574
                +   SEDG S +     Q    + + +E+AILKVMEFLA+PR+DAI LL+QYNG+AE
Sbjct:   683 TSSSTMTSEDGGSSSLMMMTQTLPREALWEESAILKVMEFLAMPRSDAIQLLSQYNGDAE 742

Query:   575 TVIQQIF 581
              VIQQ+F
Sbjct:   743 AVIQQLF 749


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.390    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      582       543   0.00095  119 3  11 22  0.39    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  308 KB (2159 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  45.92u 0.10s 46.02t   Elapsed:  00:00:02
  Total cpu time:  45.92u 0.10s 46.02t   Elapsed:  00:00:02
  Start:  Sat May 11 12:33:19 2013   End:  Sat May 11 12:33:21 2013

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