BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008003
(581 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A7HZ93|IF2_PARL1 Translation initiation factor IF-2 OS=Parvibaculum lavamentivorans
(strain DS-1 / DSM 13023 / NCIMB 13966) GN=infB PE=3
SV=1
Length = 887
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/442 (50%), Positives = 298/442 (67%), Gaps = 19/442 (4%)
Query: 141 QDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRIHSSEGTEIL-----------PRP 189
Q I++ + + +DS D A+LV ELG V+R+ S+ E L R
Sbjct: 335 QGIMLKITDVIDS-------DTAQLVAEELGHTVKRVAESDVEEGLVGEADIEEAKQARA 387
Query: 190 PVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAA 249
PVVTVMGHVDHGKTSLLDALR+T + A EAGGITQH+GA+ V +S+G ITFLDTPGHAA
Sbjct: 388 PVVTVMGHVDHGKTSLLDALRKTDVAAGEAGGITQHIGAYQVNLSSGERITFLDTPGHAA 447
Query: 250 FSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERV 309
F++MR RGA VTDIVVLVVAADDGVMPQT+EAI HA AA VP++VAINK DKP ADP RV
Sbjct: 448 FTSMRARGAKVTDIVVLVVAADDGVMPQTIEAINHAKAAGVPMIVAINKMDKPEADPTRV 507
Query: 310 KNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVV 369
KN+L + +ED+GG V V +SA GLD LE +LLQAE+++++A D A+ +V
Sbjct: 508 KNELLQHEVVVEDFGGDVLTVPISAKTGMGLDKLEETILLQAELLDIRANPDRAAEGIIV 567
Query: 370 EARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEG 429
EA+LD+GRGP+ T +V+ GTL G +V G EWGR+RA+ + G++ + A P++PVE+ G
Sbjct: 568 EAKLDRGRGPVGTVLVQRGTLKVGDIIVAGAEWGRVRALINDRGENVESAGPSVPVEVLG 627
Query: 430 LKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMP 489
L G P AGD I VV+SE RAR +++ R++ RV + + + E+P
Sbjct: 628 LGGAPEAGDVISVVESEGRAREVTAYRQRLQRDKRVGTGGRTSLDQMLSQLKEQDKKELP 687
Query: 490 VIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKS 549
++VKADVQG+ +A+ AL+ L + ++ V+HVGVG VT+SDV LA A A I+GFNV++
Sbjct: 688 IVVKADVQGSAEAIVQALEKLGTDEVTARVLHVGVGGVTESDVTLATASRAPIIGFNVRA 747
Query: 550 PPTSVSQAATQAGIKTRLLGLL 571
T AA QAG++ R ++
Sbjct: 748 -NTQARDAARQAGVEIRYYSVI 768
>sp|Q2NC10|IF2_ERYLH Translation initiation factor IF-2 OS=Erythrobacter litoralis
(strain HTCC2594) GN=infB PE=3 SV=1
Length = 832
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/461 (49%), Positives = 303/461 (65%), Gaps = 38/461 (8%)
Query: 111 KSSQDKTVDIFEGMAVVELAKQSGASITTL------QDILVNVGEKVDSEFEPLSIDVAE 164
+ Q + V + E + V ELAK+ G L D++V V + +D D AE
Sbjct: 247 REKQVRDVIVPEAITVGELAKRMGEKGADLVKELFNLDMMVTVNQTIDQ-------DTAE 299
Query: 165 LVVMELGFNVRR-------IHSSEGTE----ILPRPPVVTVMGHVDHGKTSLLDALRQTS 213
L+V + G N+++ I + E + + PRPPVVT+MGHVDHGKTSLLDALR T+
Sbjct: 300 LLVEQFGHNIQKVSEADVDIQAEEDVDPEETLQPRPPVVTIMGHVDHGKTSLLDALRGTN 359
Query: 214 LVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDG 273
+ EAGGITQH+G++ V +G +TFLDTPGHAAFS MR+RGA VTDIVVLVVAADDG
Sbjct: 360 VTKGEAGGITQHIGSYQVNTKSGGKVTFLDTPGHAAFSEMRQRGANVTDIVVLVVAADDG 419
Query: 274 VMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVS 333
VMPQT+EAI H AA VP++VAINKCDKP ADP+ ++N+L + +E G VQ VE+S
Sbjct: 420 VMPQTIEAIKHTKAAGVPMIVAINKCDKPEADPDNIRNRLLEHEIIVEKLSGDVQDVEIS 479
Query: 334 AVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCG 393
A KKTGLD+L + LQAE++ LKAR D A+A V+EA+LDKGRGP+ T ++ GTL G
Sbjct: 480 ATKKTGLDELLEKIELQAELLELKARPDRMAEATVIEAQLDKGRGPVATVLITRGTLKRG 539
Query: 394 QHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLS 453
VVG E GR+RA+ + GK +A P+MPVE+ GL G+P AGD + VV++E+RAR ++
Sbjct: 540 DTFVVGTESGRVRAVVNDQGKQIKEAGPSMPVEVLGLGGVPGAGDQLTVVENEQRAREVA 599
Query: 454 SGRKKKFEKDRVRKINEERTENLEPSEDV------PKRAEMPVIVKADVQGTVQAVTDAL 507
R++ K E+RT S D E PV+VKADVQG+V+A+ AL
Sbjct: 600 EYRQE--------KATEKRTALAPTSFDTMFNNLQSNVIEWPVLVKADVQGSVEAIVTAL 651
Query: 508 KTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVK 548
+++ ++ V V+H GVG++T+SDV LA A A I+GFNV+
Sbjct: 652 HNISNDEIKVRVLHAGVGAITESDVTLAAASNAPIIGFNVR 692
>sp|Q74CT3|IF2_GEOSL Translation initiation factor IF-2 OS=Geobacter sulfurreducens
(strain ATCC 51573 / DSM 12127 / PCA) GN=infB PE=3 SV=1
Length = 883
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 236/520 (45%), Positives = 332/520 (63%), Gaps = 25/520 (4%)
Query: 62 ELLARRRDEDSFGLKTARRESNKGKFRKREIGKPPVEAAYVPPKPKKTVKSSQDKTVDIF 121
ELL +R G KT KGK R+R++ + K + TV + + + I
Sbjct: 261 ELLEKRERIFEPGPKTG-----KGKKRERDM-------VSLGRKTEITVPKAIKRIIKIS 308
Query: 122 EGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRR--IHS 179
E + V ELAK+ G T L +L+ +G V PL +D A LV E G+ + I
Sbjct: 309 ESITVGELAKRMGVKATDLIRVLMKMGMMVTINH-PLDVDTATLVASEFGYEIENVAIDV 367
Query: 180 SEGTEILP--------RPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVV 231
E E +P RPPVVT+MGHVDHGKTSLLDA+R+ +++A EAGGITQH+GA+ V
Sbjct: 368 DEMLESVPDAPESLTKRPPVVTIMGHVDHGKTSLLDAIREANVIAGEAGGITQHIGAYDV 427
Query: 232 GMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVP 291
++ G ITFLDTPGH AF+AMR RGA VTDIV+LVVAADDGVMPQT EA+ H+ AA VP
Sbjct: 428 ELN-GRKITFLDTPGHEAFTAMRARGAKVTDIVILVVAADDGVMPQTREAVNHSKAAGVP 486
Query: 292 IVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQA 351
I+VAINK DKP A PERVK +L GL E+WGG+ VEVSA K+ L +L +LLQA
Sbjct: 487 IIVAINKIDKPEAKPERVKQELMEFGLVSEEWGGETIFVEVSAKKRINLPELLEMVLLQA 546
Query: 352 EMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDM 411
++M+LKA D A+ +VEA+LD+GRGP+ T +V+ GTL G + V G GR+RA+++
Sbjct: 547 DVMDLKANPDKDARGTIVEAKLDRGRGPVATVLVQEGTLKIGDYFVAGVNSGRVRAMQND 606
Query: 412 VGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEE 471
G ++A P+MPVE+ G G+P AGD I + E+RA+ ++S R++K + + K ++
Sbjct: 607 RGDKVNEAGPSMPVEVIGFTGVPDAGDVFISLVDEKRAKEIASHRQQKLRETELAKHSKM 666
Query: 472 RTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSD 531
E L + ++ IVKADVQG+V+AV+++L+ L++ + +NV+H VG++T++D
Sbjct: 667 SLEQLYDKIQKGEVKDLNAIVKADVQGSVEAVSESLRKLSTDAVRLNVIHSSVGAITETD 726
Query: 532 VDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
V+LA A A I+GFNV+ P + S A + G+ RL ++
Sbjct: 727 VNLASASNAIILGFNVRPEPKA-SAHAEKEGVDIRLYNII 765
>sp|B8EIA7|IF2_METSB Translation initiation factor IF-2 OS=Methylocella silvestris
(strain BL2 / DSM 15510 / NCIMB 13906) GN=infB PE=3 SV=1
Length = 886
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/427 (48%), Positives = 287/427 (67%), Gaps = 14/427 (3%)
Query: 158 LSIDVAELVVMELGFNVRRIHSSEGTE-----------ILPRPPVVTVMGHVDHGKTSLL 206
+ D A+L+ ELG V+R+ S+ E ++ RPPVVT+MGHVDHGKTSLL
Sbjct: 343 IDADTAQLIAEELGHTVKRVAESDVEEGLFDSPDVEEHLISRPPVVTIMGHVDHGKTSLL 402
Query: 207 DALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVL 266
DALR ++V+ EAGGITQH+GA+ + S G ITF+DTPGHAAF+AMR RGA VTDIVVL
Sbjct: 403 DALRHANVVSGEAGGITQHIGAYQIVASNGLPITFIDTPGHAAFTAMRARGAKVTDIVVL 462
Query: 267 VVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGK 326
VVAADDGVMPQT EAI+HA AA VPI+VAINK DKP A PERV+ +L +++E GG
Sbjct: 463 VVAADDGVMPQTAEAISHAKAAGVPIIVAINKIDKPDAKPERVRQELLQYEVQVESLGGD 522
Query: 327 VQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVK 386
VEVSA KK LD L + LQAE+++LKA D PA+ V+EARLDKGRGP+ T +V+
Sbjct: 523 TLEVEVSATKKINLDKLADLIALQAELLDLKASPDRPAEGTVIEARLDKGRGPVATVLVQ 582
Query: 387 AGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSE 446
GTL G +V G +WG++RA+ D G + +A P+MPVE+ G G P AGD + VV++E
Sbjct: 583 RGTLKVGDLIVGGSQWGKVRALIDDKGVNRQEAGPSMPVEVLGFSGSPEAGDRVGVVENE 642
Query: 447 ERARMLSSGRKKKFEKDRVRKINEERTE--NLEPSEDVPKRAEMPVIVKADVQGTVQAVT 504
RAR +++ R ++ + + N R ++ R E P+++KADVQG+++A+
Sbjct: 643 ARAREIAAYRDRQKREQAAARGNLARGSLADMMSQLKTAARKEFPLVIKADVQGSLEAIV 702
Query: 505 DALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIK 564
L+ LN+ ++ ++H GVG +T+SDV LA+A GA ++GFNV++ Q A Q G++
Sbjct: 703 ATLEKLNTDEVAARIIHAGVGGITESDVTLAEASGAVLIGFNVRAHKEG-RQLAEQQGLE 761
Query: 565 TRLLGLL 571
R ++
Sbjct: 762 IRYYNII 768
>sp|Q39VA6|IF2_GEOMG Translation initiation factor IF-2 OS=Geobacter metallireducens
(strain GS-15 / ATCC 53774 / DSM 7210) GN=infB PE=3 SV=1
Length = 884
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 227/497 (45%), Positives = 321/497 (64%), Gaps = 18/497 (3%)
Query: 85 GKFRKREIGKPPVEAAYVPPKPKKTVKSSQDKTVDIFEGMAVVELAKQSGASITTLQDIL 144
GK R+RE E+ K + TV + + + I E + V ELAK+ G T L +L
Sbjct: 278 GKGRRRE-----RESVTFGKKTEITVPKAIKRIIKISESITVGELAKRMGVKATDLIRVL 332
Query: 145 VNVGEKVDSEFEPLSIDVAELVVMELGFNVRR--IHSSEGTEILP--------RPPVVTV 194
+ +G + + PL +D A L+ E + + I + E E P RPPVVT+
Sbjct: 333 MKMG-MMATINHPLDVDTATLIAAEFSYEIENVAIDTDEMLESAPDTPESLKKRPPVVTI 391
Query: 195 MGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMR 254
MGHVDHGKTSLLDA+R+ +++A EAGGITQH+GA+ V ++ G ITFLDTPGH AF+AMR
Sbjct: 392 MGHVDHGKTSLLDAIREANVIAGEAGGITQHIGAYDVELN-GRKITFLDTPGHEAFTAMR 450
Query: 255 KRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLG 314
RGA VTDIV+LVVAADDGVMPQT EAI H+ AA VPI++AINK DKP A PERVK +L
Sbjct: 451 ARGAKVTDIVILVVAADDGVMPQTREAINHSKAAGVPIIIAINKIDKPEAKPERVKQELM 510
Query: 315 AEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLD 374
GL E+WGG+ VEVSA K+ L +L +LLQA++M+LKA D A+ +VEA+LD
Sbjct: 511 EFGLVSEEWGGETIFVEVSAKKRINLPELLEMVLLQADVMDLKANPDKEARGTIVEAKLD 570
Query: 375 KGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLP 434
+GRGP+ T +V+ GTL G + V G GR+RA+++ G A P+MPVE+ G G+P
Sbjct: 571 RGRGPVATVLVQEGTLKVGDYFVAGVHSGRVRAMQNDRGDKVLAAGPSMPVEVIGFTGVP 630
Query: 435 MAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMPVIVKA 494
AGD I + E++A+ ++S R++K + + K ++ E L + ++ IVKA
Sbjct: 631 DAGDVFISLSDEKKAKEIASHRQQKLRETELAKHSKMSLEQLYDKIQKGEVKDLNAIVKA 690
Query: 495 DVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTSV 554
DVQG+V+AV+D+L+ L++ + +NV+H VG++T++DV+LA A A I+GFNV+ P +
Sbjct: 691 DVQGSVEAVSDSLRKLSTDAVRLNVIHSSVGAITETDVNLASASNAIILGFNVRPEPKA- 749
Query: 555 SQAATQAGIKTRLLGLL 571
S A + G+ RL ++
Sbjct: 750 SAMAEKEGVDVRLYNII 766
>sp|B5YHT8|IF2_THEYD Translation initiation factor IF-2 OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=infB PE=3 SV=1
Length = 752
Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust.
Identities = 214/466 (45%), Positives = 302/466 (64%), Gaps = 13/466 (2%)
Query: 116 KTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVR 175
K++ I EG V E A+ G + + + +G + + +P+ ID A+LV G V
Sbjct: 170 KSIKIEEGTTVKEFAELIGQKVPDVIKKFMELG-YMPTINQPVDIDAAQLVAESFGIKVE 228
Query: 176 RIHSSE---------GTEIL-PRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQH 225
+ E E+L PRPP+VTVMGHVDHGKTSLLDA+R+T + +EAGGITQH
Sbjct: 229 FSQTQELDIIEEVEDSPELLQPRPPIVTVMGHVDHGKTSLLDAIRKTKVTEQEAGGITQH 288
Query: 226 MGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHA 285
+GA+ V + G ITFLDTPGH AF+A+R RGA VTDIVVLVVAADDGVMPQT+EAI HA
Sbjct: 289 IGAYKVTLQ-GKDITFLDTPGHEAFTALRARGAKVTDIVVLVVAADDGVMPQTIEAINHA 347
Query: 286 NAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEV 345
AANVPIVVA+NK DKP A+P+RV+ QL G+ E+WGG+ V++SA K+ G+++L
Sbjct: 348 KAANVPIVVAVNKIDKPEANPQRVRTQLSDYGVIPEEWGGQNIFVDISAKKRIGIENLLE 407
Query: 346 ALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRI 405
+ LQAE+M LKA + PA+ ++E+RLDKGRGP+ T IV+ GTL G V G +G++
Sbjct: 408 MIALQAEIMELKANPNKPARGTIIESRLDKGRGPVATVIVQNGTLRIGDAFVAGVTYGKV 467
Query: 406 RAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRV 465
RAI D GK ++A P+ PVE+ G + +P AGD VV+ E AR +++ R +K +
Sbjct: 468 RAIIDDTGKRINEAPPSTPVEVVGFEEVPQAGDSFTVVEDERIARQIANTRAQKKRLAEM 527
Query: 466 RKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVG 525
+K ++L + E+ +++K DVQG+V+A+ A++ + P++ V V+H GVG
Sbjct: 528 QKAQRLTLQDLYEKIKEGEVKELNLVIKGDVQGSVEALKKAVEDITHPEIKVKVIHTGVG 587
Query: 526 SVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
+T+SDV+LA A I+GFNV+ P T A Q G+ +L ++
Sbjct: 588 GITESDVNLAATANAIIIGFNVR-PETKAQDLAEQLGVDIKLYSII 632
>sp|B8GP02|IF2_THISH Translation initiation factor IF-2 OS=Thioalkalivibrio sp. (strain
HL-EbGR7) GN=infB PE=3 SV=1
Length = 853
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/366 (53%), Positives = 269/366 (73%), Gaps = 1/366 (0%)
Query: 184 EILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLD 243
E+ PRPPVVT+MGHVDHGKTSLLD +R + + + EAGGITQH+GA+ V + G ITFLD
Sbjct: 350 ELKPRPPVVTIMGHVDHGKTSLLDYIRSSRVASGEAGGITQHIGAYHVQTNRGG-ITFLD 408
Query: 244 TPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPA 303
TPGHAAF+AMR RGA VTDIV+LVV+ADDGVMPQT+EA+ HA AA VP+VVA+NK DKP
Sbjct: 409 TPGHAAFTAMRARGAKVTDIVILVVSADDGVMPQTIEAVQHAKAAGVPMVVAVNKIDKPE 468
Query: 304 ADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGP 363
ADP+RVKN+L + E+WGG Q + VSA+K TG++DL A+ LQAE+M LKA V+GP
Sbjct: 469 ADPDRVKNELSVHQVIPEEWGGDTQFIHVSALKGTGVEDLLEAVNLQAEVMELKAPVEGP 528
Query: 364 AQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAM 423
A V+E+RLDKGRGP+ T +V+ GTL G ++ G E+GR+RA+ D GK A P+M
Sbjct: 529 AAGVVIESRLDKGRGPVATVLVQRGTLNKGDVILTGQEFGRVRAMFDENGKPVKSAGPSM 588
Query: 424 PVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVP 483
PVE+ GL G P AGDD++V++ E +AR ++ R+ KF + ++ + ENL
Sbjct: 589 PVEVLGLSGTPNAGDDVLVLEDERKAREVALFRQGKFRESKLATQQAAKLENLFSQMQEG 648
Query: 484 KRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIV 543
+ + +++KADVQG+ +A+ DAL+ L++ ++ V ++ GVG +T+SD++LA+A A ++
Sbjct: 649 QVGTVNILLKADVQGSAEAIRDALEKLSTDEVKVKIIAAGVGGITESDINLAKASEAIVI 708
Query: 544 GFNVKS 549
GFNV++
Sbjct: 709 GFNVRA 714
>sp|Q2VZV0|IF2_MAGSA Translation initiation factor IF-2 OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=infB PE=3 SV=1
Length = 872
Score = 395 bits (1015), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/428 (48%), Positives = 290/428 (67%), Gaps = 14/428 (3%)
Query: 156 EPLSIDVAELVVMELGFNVRRIHSSE---GTE--------ILPRPPVVTVMGHVDHGKTS 204
+ + D AELVV E G N++R+ ++ G E + RPPVVTVMGHVDHGKTS
Sbjct: 329 QNIDADTAELVVTEFGHNMKRVSEADVLVGLEGEADTDEVLFTRPPVVTVMGHVDHGKTS 388
Query: 205 LLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIV 264
LLDALR T +V+ EAGGITQH+GA+ V MS+G ITF+DTPGH AF+AMR RGA VTDIV
Sbjct: 389 LLDALRATDVVSGEAGGITQHIGAYQVTMSSGDKITFIDTPGHEAFTAMRARGAKVTDIV 448
Query: 265 VLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWG 324
VLVVAADDG+MPQT+EAI HA AA VPI+VAINK DKP A PE+V+ +L L E+ G
Sbjct: 449 VLVVAADDGIMPQTVEAIRHAKAAGVPIIVAINKIDKPGATPEKVRQELLQHELVTEELG 508
Query: 325 GKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAI 384
G V +EVSA K+ L+ LE A+LLQAE+++LKA AQ VVEA+++KGRG + T +
Sbjct: 509 GDVLAIEVSAKKRLNLEKLEEAILLQAEILDLKANPTRAAQGVVVEAKMEKGRGSVATVL 568
Query: 385 VKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVD 444
V+ GTL G+ V G EWGR+RA+ D G S +A P+ PVE+ GL+G P AGDD + V+
Sbjct: 569 VQKGTLKVGEVFVAGAEWGRVRALVDDHGNSIKEAGPSTPVEVLGLQGTPAAGDDFVTVE 628
Query: 445 SEERARMLSSGRKKKFEKDRVRKINEERT-ENLEPSEDVPKRAEMPVIVKADVQGTVQAV 503
E RAR + +G + + +++ K+ + T E + + + E+PV++K DVQG+++A+
Sbjct: 629 DEARAREI-AGYRSRMDREAKAKLAQRGTLEQMFSAIKSGEAQELPVVIKGDVQGSIEAI 687
Query: 504 TDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGI 563
+ L+ + + + V ++H VG++ +SD+ LA+A ++GFNV++ P + A + G+
Sbjct: 688 SSTLEKMGNENVKVRILHAAVGAINESDITLAKASNGLLIGFNVRANPQA-RDMARRDGV 746
Query: 564 KTRLLGLL 571
R ++
Sbjct: 747 DIRYYSII 754
>sp|B5EI57|IF2_GEOBB Translation initiation factor IF-2 OS=Geobacter bemidjiensis
(strain Bem / ATCC BAA-1014 / DSM 16622) GN=infB PE=3
SV=1
Length = 986
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 220/503 (43%), Positives = 318/503 (63%), Gaps = 23/503 (4%)
Query: 79 RRESNKGKFRKREIGKPPVEAAYVPPKPKKTVKSSQDKTVDIFEGMAVVELAKQSGASIT 138
R + KGK+ K +IGK K + TV + + + I E + V ELAK+ G T
Sbjct: 379 RSKGRKGKYEKVQIGK----------KTEITVPKAIKRIIKISESITVGELAKRMGIKAT 428
Query: 139 TLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRI----------HSSEGTEILPR 188
L L+ +G + + PL D A L+ + G+ + + +L R
Sbjct: 429 DLIRALMKLG-VMATINHPLDFDTATLLATDFGYEIENVALDVDEILEAEPDTPESLLKR 487
Query: 189 PPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHA 248
PPVVT+MGHVDHGKTSLLDA+R+ +++A EAGGITQH+GA+ V ++ G ITFLDTPGH
Sbjct: 488 PPVVTIMGHVDHGKTSLLDAIREANVIAGEAGGITQHIGAYDVELN-GKKITFLDTPGHE 546
Query: 249 AFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPER 308
AF+AMR RGA VTDIV+LVVAADDGVMPQT EA+ H+ AA VPI+VAINK DKP A P +
Sbjct: 547 AFTAMRARGAKVTDIVILVVAADDGVMPQTREAVNHSKAAGVPIIVAINKIDKPDASPGK 606
Query: 309 VKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYV 368
VK +L GL E+WGG+ VEVSA K+ L+ L +LLQA+++ L+A D PA+ +
Sbjct: 607 VKQELMEFGLVSEEWGGETIFVEVSAKKRINLESLLEMVLLQADVLELRANPDKPARGTI 666
Query: 369 VEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIE 428
VEA+LDKGRGP+ T +V+ GTL G + V G +GR+RA+++ G+ A PAMPVE+
Sbjct: 667 VEAKLDKGRGPVATVLVQEGTLKSGDYFVAGVHYGRVRAMQNDRGEKVLAAGPAMPVEVI 726
Query: 429 GLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEM 488
G G+P AGD + + E++A+ +++ R+ K + + K ++ E L + ++
Sbjct: 727 GFNGVPDAGDIFVAMGDEKQAKEIANHRQMKLRESELAKHSKLSLEQLYEKIQKGEVKDL 786
Query: 489 PVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVK 548
IVK DVQG+V+AV ++L+ L++ + +NV+H VG++T++DV+LA A A I+GFNV+
Sbjct: 787 NAIVKGDVQGSVEAVAESLRKLSTDAIRLNVLHASVGAITETDVNLASASNAIILGFNVR 846
Query: 549 SPPTSVSQAATQAGIKTRLLGLL 571
P + A + G+ RL ++
Sbjct: 847 -PEVKAAALAEKEGVDVRLYNII 868
>sp|A4XL70|IF2_CALS8 Translation initiation factor IF-2 OS=Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903) GN=infB
PE=3 SV=1
Length = 858
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/460 (47%), Positives = 303/460 (65%), Gaps = 41/460 (8%)
Query: 143 ILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRR----------IHSSEGTE--ILPRPP 190
++ N+ +++D DVA L+ + GF V + + E E + PRPP
Sbjct: 312 VMANINQEID-------FDVASLIAEDYGFKVEKEIIKSEEEILLEDQEDPEETLQPRPP 364
Query: 191 VVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAF 250
VV VMGHVDHGKTSLLDA+R T++ KEAGGITQH+GA VV ++ G ITFLDTPGH AF
Sbjct: 365 VVVVMGHVDHGKTSLLDAIRNTNVTEKEAGGITQHIGASVVEVN-GRKITFLDTPGHEAF 423
Query: 251 SAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVK 310
+AMR RGA VTDI VLVVAADDGVMPQT+EAI HA AANV I+VAINK DKP A+PERVK
Sbjct: 424 TAMRARGAQVTDIAVLVVAADDGVMPQTVEAINHAKAANVTIIVAINKIDKPEANPERVK 483
Query: 311 NQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVE 370
QL GL E+WGG V VSA KK G+D L +LL A+++ LKA + PA+ V+E
Sbjct: 484 QQLSEYGLIPEEWGGDTVFVNVSAKKKIGIDHLLEMILLVADLLELKANPNRPARGRVIE 543
Query: 371 ARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGL 430
A+LDKGRGP+ T +V+ GTL G +VVVG WGR+RA+ D G+ +A P+MPVEI GL
Sbjct: 544 AKLDKGRGPVATVLVQKGTLKVGDYVVVGSTWGRVRAMIDDKGQRIKEAGPSMPVEILGL 603
Query: 431 KGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVR--KIN-EERTENLEPSEDVPKRAE 487
+ +P AGD+++ V E+ A+ ++ R+++ ++++++ KI+ +E E ++ + E
Sbjct: 604 EDVPTAGDELVCVKDEKTAKTIAQIRQERLKEEKMQQSKISLDELFERIQKGQ----LKE 659
Query: 488 MPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNV 547
+ VI+KADVQG+V+A+ A++ L++ ++ V V+H VG++T+SDV LA A A I+GFNV
Sbjct: 660 LRVIIKADVQGSVEALKSAIERLSNDKVTVKVIHAAVGAITESDVTLASASDAIIIGFNV 719
Query: 548 KSPPTSVSQAATQA--------------GIKTRLLGLLRP 573
+ ++S A + IK + GLL P
Sbjct: 720 RPEVGAMSLAEKEKVDIRMYRIIYDVINDIKAAMKGLLEP 759
>sp|A1S462|IF2_SHEAM Translation initiation factor IF-2 OS=Shewanella amazonensis
(strain ATCC BAA-1098 / SB2B) GN=infB PE=3 SV=1
Length = 882
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 227/509 (44%), Positives = 321/509 (63%), Gaps = 28/509 (5%)
Query: 67 RRDEDSFGL---KTARRESNKGKFRKREIGKPPVEAAYVPPKPKKTVKS----------S 113
R EDS L K RR NK + + + GK E K K T +S +
Sbjct: 237 RAAEDSADLDDEKRGRRNRNKTQTKSKRGGKDAREGREKHMKYKSTPESMAHGFNKPVAA 296
Query: 114 QDKTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFN 173
+ V I E + V ELA++ T + ++ +G V + L + A+LV E+G
Sbjct: 297 VTRDVRIGETVTVAELAQKMAVKATEIIKAMMKMGSMVTIN-QVLDQETAQLVAEEMGHK 355
Query: 174 VRRIHSSE-------------GTEILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAG 220
V + +E T++ PR PVVT+MGHVDHGKTSLLD +R+T + A EAG
Sbjct: 356 VVLLRENELEHQVLADRDDEGTTKLEPRAPVVTIMGHVDHGKTSLLDYIRRTKVAAGEAG 415
Query: 221 GITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLE 280
GITQH+GA+ V G ITFLDTPGHAAF+AMR RGA TDIV+LVVAADDGVMPQT+E
Sbjct: 416 GITQHIGAYHVETDNGM-ITFLDTPGHAAFTAMRARGAKATDIVILVVAADDGVMPQTIE 474
Query: 281 AIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGL 340
AI HA A NVP++VA+NK DKP AD +RVKN+L G+ EDWGG+ VSA G+
Sbjct: 475 AIQHAKAGNVPLIVAVNKMDKPEADIDRVKNELSQHGVMSEDWGGENMFCYVSAKTGQGV 534
Query: 341 DDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGH 400
D+L A+LLQAE++ LKA DG A V+E++LDKGRGP+ T +V+ GTL G V+ G
Sbjct: 535 DELLEAILLQAEVLELKAVRDGMAAGVVIESQLDKGRGPVATVLVQEGTLRQGDIVLCGL 594
Query: 401 EWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKF 460
E+G+IRA++D G+ +A P++PVEI GL G+P AGD+ VV E +AR ++ R+ KF
Sbjct: 595 EYGKIRAMKDENGRPIMEAGPSIPVEILGLSGVPSAGDEATVVRDERKAREVALYRQGKF 654
Query: 461 EKDRVRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVV 520
++ + + + EN+ + + E+ +++KADVQG+++A+TD+L+ L++ ++ VN++
Sbjct: 655 RDVKLARQQKSKLENMFANMTEGEVQELNIVLKADVQGSLEAITDSLRKLSTDEVKVNII 714
Query: 521 HVGVGSVTQSDVDLAQACGACIVGFNVKS 549
GVG++T++D LA A A +VGFNV++
Sbjct: 715 ASGVGALTETDATLAAASNAIMVGFNVRA 743
>sp|Q0BPG2|IF2_GRABC Translation initiation factor IF-2 OS=Granulibacter bethesdensis
(strain ATCC BAA-1260 / CGDNIH1) GN=infB PE=3 SV=1
Length = 915
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/463 (47%), Positives = 299/463 (64%), Gaps = 15/463 (3%)
Query: 122 EGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRIHSS- 180
E +AV ELA + + L+ +G + + + + D AELVV E G VRR+ S
Sbjct: 339 ETIAVGELANRMAVRAADVIKQLMRMG-MMATVTQTIDADTAELVVQEFGHRVRRVSESD 397
Query: 181 -----EG-----TEILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFV 230
EG +++ PRPPVVTVMGHVDHGKTSLLDALR T + A EAGGITQH+GA+
Sbjct: 398 VEVGLEGISDIDSDLQPRPPVVTVMGHVDHGKTSLLDALRATDVAAGEAGGITQHIGAYQ 457
Query: 231 VGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANV 290
V + + +TFLDTPGH AF+AMR RGA+VTDIVVLVVAADDGVMPQT+EAI HA AAN
Sbjct: 458 VTLPSRQKLTFLDTPGHEAFTAMRSRGASVTDIVVLVVAADDGVMPQTIEAIKHAKAANA 517
Query: 291 PIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQ 350
PI+VAINKCDKP A+P RV+ +L + +ED GG Q VEVSA+K+ LD LE A+LLQ
Sbjct: 518 PIIVAINKCDKPGANPGRVRQELLHHEIVVEDMGGDTQDVEVSALKRQNLDKLEEAILLQ 577
Query: 351 AEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRD 410
AE+++LKA D A+ VVE+RLD+GRGP+ T +V+ GTL G VV G EWGR+RA+ D
Sbjct: 578 AEVLDLKANPDRAAEGTVVESRLDRGRGPVATVLVQKGTLRQGDIVVAGAEWGRVRAMLD 637
Query: 411 MVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINE 470
G+ +A P+ PVEI GL G+P AG+ + V++E RAR +S R++K + I
Sbjct: 638 DKGQQMKEALPSTPVEILGLAGVPSAGEPFVAVENESRAREISEFRQRKIREKMAAGIAA 697
Query: 471 ER--TENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVT 528
R E + + E+ V++KADVQG+ +A+ ++ ++ V + VG ++
Sbjct: 698 GRGTLEQMLSRIQAGAQKEVAVVIKADVQGSAEAIATTVQKQEHEEVKVRTLLSSVGQIS 757
Query: 529 QSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
+SDV LA+A A ++ FNV++ + A + G+ R ++
Sbjct: 758 ESDVQLAKASNAVLIAFNVRA-TNQARELAQREGVDIRYYSII 799
>sp|A8IG20|IF2_AZOC5 Translation initiation factor IF-2 OS=Azorhizobium caulinodans
(strain ATCC 43989 / DSM 5975 / ORS 571) GN=infB PE=3
SV=1
Length = 1058
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/427 (49%), Positives = 286/427 (66%), Gaps = 14/427 (3%)
Query: 158 LSIDVAELVVMELGFNVRRIHSSEGTE-----------ILPRPPVVTVMGHVDHGKTSLL 206
+ D AEL+ +LG VRR+ S+ E +LPRPPVVT+MGHVDHGKTSLL
Sbjct: 515 IDADTAELIAADLGHTVRRVSESDVEEGLFDSADAPEDLLPRPPVVTIMGHVDHGKTSLL 574
Query: 207 DALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVL 266
D+LR+ ++V+ EAGGITQH+GA+ V G ITF+DTPGHAAF+AMR RGA VTDIVVL
Sbjct: 575 DSLRKANVVSGEAGGITQHIGAYQVTSPLGGKITFIDTPGHAAFTAMRARGAKVTDIVVL 634
Query: 267 VVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGK 326
VVAADDGVMPQT+EAI HA AA VP++VAINK DKP A PERV+++L +++E GG
Sbjct: 635 VVAADDGVMPQTVEAINHARAAKVPLIVAINKIDKPDAKPERVRSELLQYEVQVESMGGD 694
Query: 327 VQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVK 386
VEVSA K+ LD L A+ LQ+E+++LKA D PA+ VVEA+LD+GRGP+ T +V+
Sbjct: 695 TLEVEVSATKQINLDKLLEAISLQSEVLDLKANPDRPAEGTVVEAKLDRGRGPVATVLVQ 754
Query: 387 AGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSE 446
GTL G VV G E+GR+RA+ G +T +A P++PVE+ G G P AGD + VV+SE
Sbjct: 755 RGTLRVGDIVVAGAEFGRVRALITDTGATTTEAGPSVPVEVLGFNGTPEAGDRLAVVESE 814
Query: 447 ERARMLSSGR-KKKFEKDRVRK-INEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVT 504
RAR ++ R ++K EK R + E + R E P+I+K DV G+V+A+
Sbjct: 815 ARAREITEYRQRQKREKAAARSAVVRGSLEQMMSQVRSTGRKEFPLIIKGDVSGSVEAII 874
Query: 505 DALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIK 564
AL+ L + ++ ++H G G + +SDV LA+ GA I+GFNV++ +A +AGI+
Sbjct: 875 GALEKLGNDEVQARIIHSGAGGINESDVTLAETSGAAIIGFNVRA-NKEARDSAERAGIE 933
Query: 565 TRLLGLL 571
R ++
Sbjct: 934 IRYYNII 940
>sp|Q2RMS0|IF2_RHORT Translation initiation factor IF-2 OS=Rhodospirillum rubrum (strain
ATCC 11170 / NCIB 8255) GN=infB PE=3 SV=2
Length = 866
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/464 (47%), Positives = 297/464 (64%), Gaps = 36/464 (7%)
Query: 129 LAKQSGASITTLQD--ILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRIHSSE----- 181
+A++ I TL ++ + + +D+ D AELVV E G RR+ S+
Sbjct: 300 MAERGANVIKTLMKMGVMATINQTIDA-------DTAELVVAEFGHASRRVSDSDVELGL 352
Query: 182 ------GTEIL-PRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMS 234
GTE+L RPPVVTVMGHVDHGKTSLLDA+R+T + EAGGITQH+GA+ V
Sbjct: 353 GDALPDGTEVLTSRPPVVTVMGHVDHGKTSLLDAMRKTDVAGGEAGGITQHIGAYQVVTK 412
Query: 235 TGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVV 294
+G ITF+DTPGHAAF+AMR RGA VTDIVVLVVAA+DG+MPQT+EAI HA AA VP+VV
Sbjct: 413 SGQKITFIDTPGHAAFTAMRARGARVTDIVVLVVAANDGIMPQTIEAIRHARAAEVPVVV 472
Query: 295 AINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMM 354
AINK D P A+PE+V+ L L +E GG V VEVSA ++ LD LE A+LLQ+E++
Sbjct: 473 AINKMDLPDANPEKVRTDLLQHELVVEQLGGDVLNVEVSAKRRLNLDKLEEAILLQSEIL 532
Query: 355 NLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGK 414
+LKA D Q V+EA+++KGRG + T +V+ GTL G V G EWGR+RA+ D G
Sbjct: 533 DLKANADRACQGVVIEAKVEKGRGSVATILVQKGTLKVGDIFVAGAEWGRVRALVDDHGN 592
Query: 415 STDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDR-------VRK 467
A PAMPVE+ G +G P AGDD IVV+ E RAR +S R++ KDR R
Sbjct: 593 RVIAATPAMPVEVLGFQGTPAAGDDFIVVEDENRAREISEYRQR---KDRDAQQVRTARG 649
Query: 468 INEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSV 527
E+ E ++ E E+PV++KADVQG+V+A+ L+ L + + + V+H VG++
Sbjct: 650 TMEQMFERIQAGE----ARELPVVIKADVQGSVEALVGTLEKLGNDDVKIRVLHAAVGAI 705
Query: 528 TQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
+SDV LA+A I+GFNV++ P + + A + GI R ++
Sbjct: 706 NESDVTLAKASDGLIIGFNVRANPQA-REMARRDGIDIRYHSII 748
>sp|A0KNE3|IF2_AERHH Translation initiation factor IF-2 OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=infB PE=3
SV=1
Length = 897
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/450 (47%), Positives = 302/450 (67%), Gaps = 13/450 (2%)
Query: 115 DKTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNV 174
++ V I E + V ELA + + +++ +G + + + + + A+LV E+G V
Sbjct: 315 NRDVVIGETITVAELANKMAVKGVEVIKVMMKMG-AMATINQVIDQETAQLVAEEMGHKV 373
Query: 175 --RRIHS---------SEGTEILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGIT 223
RR + E +E PR PVVT+MGHVDHGKTSLLD +R+ + A EAGGIT
Sbjct: 374 VLRRENELEEAVLSDRDETSEAKPRAPVVTIMGHVDHGKTSLLDYIRKAKVAAGEAGGIT 433
Query: 224 QHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIA 283
QH+GA+ V +G ITFLDTPGHAAF++MR RGA TDIVVLVVAADDGVMPQT+EAI
Sbjct: 434 QHIGAYHVETDSGM-ITFLDTPGHAAFTSMRARGAKATDIVVLVVAADDGVMPQTIEAIQ 492
Query: 284 HANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDL 343
HA AA VP+VVA+NK DKP ADP+RVK +L + EDWGG Q V VSA G+DDL
Sbjct: 493 HAKAAEVPLVVAVNKIDKPEADPDRVKTELARYNVMSEDWGGDCQFVHVSAKSGQGIDDL 552
Query: 344 EVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWG 403
A+L+Q+E++ LKA VDG A V+E+ LDKGRGP+ T +V+ GTL G V+ G E+G
Sbjct: 553 LEAILIQSEVLELKAVVDGMANGVVIESFLDKGRGPVATVLVQEGTLRQGDIVLCGLEYG 612
Query: 404 RIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKD 463
R+RA+RD +G+ +A P++PVEI GL G+P AGD+ VV E++AR ++ R+ KF +
Sbjct: 613 RVRAMRDELGREIKEAGPSLPVEILGLSGVPSAGDEATVVRDEKKAREVALYRQGKFREV 672
Query: 464 RVRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVG 523
++ + + + EN+ + + +E+ V++KADVQG+V+A+ DAL L++ ++ V +V G
Sbjct: 673 KLARQQKAKLENMFANMTEGEVSEVNVVIKADVQGSVEAICDALVKLSTDEVKVKIVGSG 732
Query: 524 VGSVTQSDVDLAQACGACIVGFNVKSPPTS 553
VG +T++D LA A A +VGFNV++ ++
Sbjct: 733 VGGITETDATLAAASSAILVGFNVRADASA 762
>sp|Q5FQM3|IF2_GLUOX Translation initiation factor IF-2 OS=Gluconobacter oxydans (strain
621H) GN=infB PE=3 SV=1
Length = 917
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/469 (46%), Positives = 308/469 (65%), Gaps = 15/469 (3%)
Query: 116 KTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVR 175
+ V + E + V ELA + A + L+ +G + + + + D AELVV E G ++
Sbjct: 335 RDVIVPETITVAELANRMAARQGEVIKALMKMG-VMATAAQSIDGDTAELVVEEFGHRIK 393
Query: 176 RIHSS------EGTE-----ILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQ 224
R+ S EG E + PR PVVTVMGHVDHGKTSLLDALR T + A EAGGITQ
Sbjct: 394 RVSESDVEIGIEGVEDNADDLKPRAPVVTVMGHVDHGKTSLLDALRTTDVAASEAGGITQ 453
Query: 225 HMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAH 284
H+GA+ + +G ITF+DTPGH AF++MR RGA+VTDIVVLVVAADDGVMPQT+EAI H
Sbjct: 454 HIGAYQITAPSGKKITFIDTPGHEAFTSMRARGASVTDIVVLVVAADDGVMPQTIEAIKH 513
Query: 285 ANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLE 344
A AAN PI+VAINK DKP A+P RV+ +L + +E+ GG Q VEVSA+K+ GLD LE
Sbjct: 514 AKAANAPIIVAINKIDKPGANPNRVRQELLNHEIVVEEMGGDTQDVEVSALKRIGLDKLE 573
Query: 345 VALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGR 404
+LLQ+EM++LKA D A+ V+E+RLD+GRGP+ +V+ GTL G VV G EWGR
Sbjct: 574 ECILLQSEMLDLKANPDRVAEGVVIESRLDRGRGPVAALLVQKGTLRRGDIVVAGAEWGR 633
Query: 405 IRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKF-EKD 463
+RA+ D G+ +A P+MPVE+ GL G+P AG+ +VV+++ RAR +S R++K EK+
Sbjct: 634 VRAVLDDRGRQVKEAGPSMPVEVLGLTGVPGAGEPFVVVENDARAREISEFRQRKIKEKE 693
Query: 464 RVRKINEERT-ENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHV 522
++ T + + + E+ +++KADVQG+ +A++ ++ L ++ V V++
Sbjct: 694 AASQVAARGTLDQMLARIQAGVQKEVALLIKADVQGSAEAISTTVQKLAHEEVAVRVLNA 753
Query: 523 GVGSVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
VG +T+SD+ LA+A A IV FNV++ T + A + G+ R ++
Sbjct: 754 SVGQITESDIQLAKASDAIIVAFNVRA-TTQARELAQREGVDIRYYSII 801
>sp|Q11BC8|IF2_MESSB Translation initiation factor IF-2 OS=Mesorhizobium sp. (strain
BNC1) GN=infB PE=3 SV=1
Length = 856
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/427 (48%), Positives = 286/427 (66%), Gaps = 15/427 (3%)
Query: 158 LSIDVAELVVMELGFNVRRIHSSEGTEIL-----------PRPPVVTVMGHVDHGKTSLL 206
+ D AELV +E G +R+ S+ E L PRPPVVT+MGHVDHGKTSLL
Sbjct: 314 IDADTAELVAVEFGHTAKRVAESDVEEGLFNIEDRPEDLKPRPPVVTIMGHVDHGKTSLL 373
Query: 207 DALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVL 266
DA+R+ ++VA EAGGITQH+GA+ V G +ITF+DTPGHAAF+AMR RGA TDI +L
Sbjct: 374 DAIRKANVVAGEAGGITQHIGAYQVEQD-GNTITFIDTPGHAAFTAMRARGAQATDIAIL 432
Query: 267 VVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGK 326
VVAADD VMPQT+E+I HA AA VPI+VAINK DKP A+P++V+ +L + +E GG
Sbjct: 433 VVAADDSVMPQTVESINHAKAAGVPIIVAINKIDKPDANPQKVRTELLQHEVFVESMGGD 492
Query: 327 VQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVK 386
V VEVSA+K T LD L A+LLQAE++ LKA D A+ VVEA+LD+GRG + T +V+
Sbjct: 493 VLDVEVSAIKGTNLDKLLEAILLQAEILELKANPDRTAEGVVVEAKLDRGRGSVATVLVQ 552
Query: 387 AGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSE 446
AGTL G +V G EWGR+RA+ + G++ A P+ PVE+ GL+G P AGD VVD+E
Sbjct: 553 AGTLKPGDVIVAGSEWGRVRALVNERGEAVKVAPPSTPVEVLGLQGPPQAGDRFAVVDTE 612
Query: 447 ERARMLSSGRKKKFEKDRVRKINEER--TENLEPSEDVPKRAEMPVIVKADVQGTVQAVT 504
RAR +S R++K + V + +R E + E P+I+K DVQG+++A+
Sbjct: 613 ARAREISEYRQRKAREKAVARQAGQRGSLEQMMSQLQSSGMKEFPLIIKGDVQGSIEAIV 672
Query: 505 DALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIK 564
+AL+ L + ++ +VH G G++T+SD+ LA+ A I+GFNV++ + AA QAGI+
Sbjct: 673 NALEKLGTEEVRARIVHSGAGAITESDISLAETSDAAIIGFNVRANKQA-RDAAEQAGIE 731
Query: 565 TRLLGLL 571
R ++
Sbjct: 732 IRYYNII 738
>sp|Q3AB98|IF2_CARHZ Translation initiation factor IF-2 OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=infB PE=3
SV=1
Length = 827
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/478 (45%), Positives = 309/478 (64%), Gaps = 27/478 (5%)
Query: 112 SSQDKTVDIFEGMAVVELAKQSGASITTL------QDILVNVGEKVDSEFEPLSIDVAEL 165
+++ K + I E M V E AK G S + IL + +++D+ D A +
Sbjct: 240 AAEPKAIVIPERMTVQEFAKIMGKSAAEVIKKLMSYGILATINQEIDA-------DTATI 292
Query: 166 VVMELGFNVRRI-----------HSSEGTEIL-PRPPVVTVMGHVDHGKTSLLDALRQTS 213
+ + G+ V + + E L PRPP+VTVMGHVDHGKTSLLDA+RQT+
Sbjct: 293 IATDFGYEVTVEKEEKEDIWLLEETPDDPESLEPRPPIVTVMGHVDHGKTSLLDAIRQTN 352
Query: 214 LVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDG 273
+ A EAGGITQH+GA+ V G ITF+DTPGH AF+AMR RGA VTDI +LVVAADDG
Sbjct: 353 VTATEAGGITQHIGAYQV-EHNGRKITFIDTPGHEAFTAMRARGAQVTDIAILVVAADDG 411
Query: 274 VMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVS 333
VMPQT+EAI HA AA VPI+VA+NK DKP A P+RVK QL GL E WGG VEVS
Sbjct: 412 VMPQTVEAINHAKAAGVPIIVAVNKIDKPNAQPDRVKQQLTEYGLIPEAWGGDTVFVEVS 471
Query: 334 AVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCG 393
A+KK G+++L +LL A++ LKA + PA+ V+EA+LDKGRGP+ T +V++GTL G
Sbjct: 472 ALKKIGIEELLEMILLVADLKELKANPNKPARGTVIEAKLDKGRGPVATVLVQSGTLNVG 531
Query: 394 QHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLS 453
VVVG +GR+RA+ D G+ KA P+MPVE+ GL +P AGD ++VVD E+ AR L+
Sbjct: 532 DVVVVGLTYGRVRALMDDKGRRVKKATPSMPVEVLGLNDVPSAGDILVVVDDEKTARTLA 591
Query: 454 SGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSP 513
R+++ ++ +R ++ E+L K E+ +++KADV G+V+A+ +L L++
Sbjct: 592 EKRQEQKREEELRASSKVSLEDLFKHIQEGKIKELNIVLKADVHGSVEAIKQSLSRLSTE 651
Query: 514 QLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
++ VNV+H GVG++T++D+ LA A A ++GFNV+ P ++ + A I R+ ++
Sbjct: 652 EVKVNVIHSGVGAITETDIMLASASNAIVIGFNVR-PDSNARKLAETEKIDVRVYRII 708
>sp|Q1GVI9|IF2_SPHAL Translation initiation factor IF-2 OS=Sphingopyxis alaskensis
(strain DSM 13593 / LMG 18877 / RB2256) GN=infB PE=3
SV=1
Length = 845
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/449 (48%), Positives = 295/449 (65%), Gaps = 12/449 (2%)
Query: 111 KSSQDKTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMEL 170
+ Q + V + + + V ELA + L L +G V + + + D AEL+V E
Sbjct: 258 REKQVREVVVPDTITVQELANRMAEKGADLVKALFKMGMPV-TVNQTIDQDTAELLVTEF 316
Query: 171 GFNVRRIHSSE-----------GTEILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEA 219
G ++R+ ++ ++ PR PVVT+MGHVDHGKTSLLDALR ++ A EA
Sbjct: 317 GHEIKRVSEADIDIRHDEDVDDAAQLKPRAPVVTIMGHVDHGKTSLLDALRGANVQAGEA 376
Query: 220 GGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTL 279
GGITQH+GA+ V G+ ITFLDTPGH AF+ MR+RGA VTDIV+LVVAADDG+ PQ++
Sbjct: 377 GGITQHIGAYQVKAKDGSVITFLDTPGHEAFTEMRQRGANVTDIVILVVAADDGLKPQSI 436
Query: 280 EAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTG 339
EAI HA AA VPI+VAINK DK A+P+RV+ +L L +E+ GG VQ VEVSA+KKTG
Sbjct: 437 EAINHAKAAGVPIIVAINKVDKEGANPQRVRERLLEHELVVEEMGGDVQNVEVSALKKTG 496
Query: 340 LDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVG 399
LD L A+ LQAE+M LKA D A+ V+EA+LDKGRGP+ T +V+ GTL G V G
Sbjct: 497 LDKLLDAIALQAEIMELKANPDRAAEGTVIEAKLDKGRGPVATILVRRGTLKVGDIFVCG 556
Query: 400 HEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKK 459
E GR+RA+ D GK +A P+MPVE+ GL G+PMAGD +IVV++E RAR +++ R+++
Sbjct: 557 AESGRVRALVDDHGKQVKQATPSMPVEVLGLGGVPMAGDTLIVVENEARAREVAAYRQEQ 616
Query: 460 FEKDRVRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNV 519
K R + D E PV++K DVQG+V+A+ +AL L++ ++ V V
Sbjct: 617 ALKKRTAQAPVSLEGMFSALADKANVIEYPVVIKGDVQGSVEAIVNALNKLSTDEIRVRV 676
Query: 520 VHVGVGSVTQSDVDLAQACGACIVGFNVK 548
+H G G++T+SDV LA + A I+GFNV+
Sbjct: 677 LHAGAGAITESDVTLAASTRAPIIGFNVR 705
>sp|Q5NQ27|IF2_ZYMMO Translation initiation factor IF-2 OS=Zymomonas mobilis subsp.
mobilis (strain ATCC 31821 / ZM4 / CP4) GN=infB PE=3
SV=1
Length = 989
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 222/472 (47%), Positives = 308/472 (65%), Gaps = 20/472 (4%)
Query: 114 QDKTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFN 173
Q + V + E + V ELA + L L +G V + + + D AEL+V E G N
Sbjct: 406 QIRDVVVPEAITVQELANRMAERGADLVKALFKMGVAV-TLTQTIDQDTAELLVTEFGHN 464
Query: 174 VRRIHSSE-----GTEILP------RPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGI 222
++R+ S+ +++ P RPPVVT+MGHVDHGKTSLLDALR + +V EAGGI
Sbjct: 465 IKRVSESDVEIDSSSDVDPEETLKSRPPVVTIMGHVDHGKTSLLDALRGSDVVRGEAGGI 524
Query: 223 TQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAI 282
TQH+GA+ V +G IT LDTPGH AFS MR RGA VTDIV++VVAADDG+ PQT+EAI
Sbjct: 525 TQHIGAYQVESPSGEKITLLDTPGHEAFSEMRARGANVTDIVIIVVAADDGLRPQTVEAI 584
Query: 283 AHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDD 342
HA AA+VPI++AINK DKP A+P+R++ L +++E GG VQ VE+SA KKTGLD+
Sbjct: 585 DHARAADVPIIIAINKMDKPEANPQRIREALLQYNVQVEAMGGDVQDVEISAAKKTGLDE 644
Query: 343 LEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEW 402
L +LLQAEM+ LKA D A+ VVEA+LD+GRGP+ T +V+ GTL G VVG
Sbjct: 645 LIEKILLQAEMLELKANPDRAAEGTVVEAKLDRGRGPVATILVRRGTLKVGDIFVVGEFS 704
Query: 403 GRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEK 462
GR+RA+ D GK+ +A P+MPVE+ GL G+P AGD + VV+SE RAR +++ R +
Sbjct: 705 GRVRAMTDAQGKNQKEAGPSMPVEVLGLSGVPQAGDTLTVVESEARAREVAAYRAEIA-- 762
Query: 463 DRVRKINEERTENLEP--SEDVPKRA-EMPVIVKADVQGTVQAVTDALKTLNSPQLFVNV 519
+RK + +LE S K+A E P+++KAD QG+V+A+ AL +++ + V +
Sbjct: 763 --LRKRTTAQPASLESMFSALKDKQAVEYPLLIKADTQGSVEAIAGALNKISNEDIRVRI 820
Query: 520 VHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
+H GVG +T+SDV LA A GA I+GF+V+ P + A + G+ + ++
Sbjct: 821 LHQGVGGITESDVSLAAASGAPIIGFHVR-PNSKARDIARRDGVALKFYDVI 871
>sp|A0LE19|IF2_MAGSM Translation initiation factor IF-2 OS=Magnetococcus sp. (strain
MC-1) GN=infB PE=3 SV=1
Length = 949
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/505 (45%), Positives = 310/505 (61%), Gaps = 38/505 (7%)
Query: 65 ARRRDEDSFGLKTARRESNKGKFRKREIGKPPVEAAYVPPKPKKTVKSSQDKTVDIFEGM 124
A RR + R + +GK R+R+ P ++ P P + V I E +
Sbjct: 323 AGRRKNKKYQDNEDRLQQPRGKSRRRK----PFKSEMQAPAPVY-------REVTIPETI 371
Query: 125 AVVELAK----QSGASITTL--QDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRIH 178
V ELA +S I L Q +LV + + +D D A LVV E+G + +
Sbjct: 372 TVGELANRMAVKSSEVIKLLFAQGMLVTINQTLDQ-------DTAVLVVEEMGHKPKSVS 424
Query: 179 SSEGTE------------ILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHM 226
S E + RPPV+TVMGHVDHGKTSLLDA+R T + ++E GGITQH+
Sbjct: 425 ESAAIEAELDAGEDAAEDMETRPPVITVMGHVDHGKTSLLDAIRSTDVTSREHGGITQHI 484
Query: 227 GAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHAN 286
GA+ V +++G ITFLDTPGH+AF+AMR RGA VTDIVVLVVAADDGVMPQT+EAI HA
Sbjct: 485 GAYQVTLASGDKITFLDTPGHSAFTAMRARGAQVTDIVVLVVAADDGVMPQTVEAINHAK 544
Query: 287 AANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVA 346
+A VPIVVA+NK DKP ++P+RV QL GL E WGG V VSA G+ LE
Sbjct: 545 SAKVPIVVAVNKIDKPGSNPDRVMQQLSDHGLVPEAWGGDTIFVHVSAKSGEGISTLEEM 604
Query: 347 LLLQAEMMNLKAR-VDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRI 405
LLLQAEM+NL++ A+ ++EA LD+GRG + T +V+ GTL G VVG+EW R+
Sbjct: 605 LLLQAEMLNLQSNPTKKRARGTIIEANLDRGRGAVATCLVQNGTLRVGDICVVGNEWCRV 664
Query: 406 RAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKK-FEKDR 464
RA+ D G +A P+MPVEI GL G+P AGDD++ V+ E RAR ++ R++K E +
Sbjct: 665 RALNDDRGNQVSEASPSMPVEIIGLSGVPQAGDDLVAVNDERRAREIAQFRQQKDKEAIQ 724
Query: 465 VRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGV 524
++ R E++ + + E+ V++KADVQG+V+AV +AL+ + Q+ V V+H GV
Sbjct: 725 AKQQPATRLEDMFEHIEQGEVEELNVVLKADVQGSVEAVAEALRKIKHEQIEVRVIHTGV 784
Query: 525 GSVTQSDVDLAQACGACIVGFNVKS 549
G + +SDV LA A GA VGFNV++
Sbjct: 785 GGINESDVMLAVASGAITVGFNVRA 809
>sp|C6E2Q0|IF2_GEOSM Translation initiation factor IF-2 OS=Geobacter sp. (strain M21)
GN=infB PE=3 SV=1
Length = 980
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/503 (43%), Positives = 317/503 (63%), Gaps = 23/503 (4%)
Query: 79 RRESNKGKFRKREIGKPPVEAAYVPPKPKKTVKSSQDKTVDIFEGMAVVELAKQSGASIT 138
R + KGK+ K +IGK K + TV + + + I E + V ELAK+ G T
Sbjct: 373 RSKGKKGKYEKVQIGK----------KTEITVPKAIKRIIKISESITVGELAKRMGIKAT 422
Query: 139 TLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRI----------HSSEGTEILPR 188
L L+ +G + + PL D A L+ + G+ + + +L R
Sbjct: 423 DLIRALMKLG-VMATINHPLDFDTATLLATDFGYEIENVALDVDEILEAEPDAPESLLKR 481
Query: 189 PPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHA 248
PPVVT+MGHVDHGKTSLLDA+R+ +++A EAGGITQH+GA+ V ++ G ITFLDTPGH
Sbjct: 482 PPVVTIMGHVDHGKTSLLDAIREANVIAGEAGGITQHIGAYDVELN-GKKITFLDTPGHE 540
Query: 249 AFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPER 308
AF+AMR RGA VTDIV+LVVAADDGVMPQT EA+ H+ AA VPI+VAINK DKP A P +
Sbjct: 541 AFTAMRARGAKVTDIVILVVAADDGVMPQTREAVNHSKAAGVPIIVAINKIDKPDASPGK 600
Query: 309 VKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYV 368
VK +L GL E+WGG+ VEVSA K+ L+ L +LLQA+++ L+A + A+ V
Sbjct: 601 VKQELMEFGLVSEEWGGETIFVEVSAKKRINLESLLEMVLLQADVLELRANPEKAARGTV 660
Query: 369 VEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIE 428
VEA+LDKGRGP+ T +V+ GTL G + V G +GR+RA+++ G+ A PAMPVE+
Sbjct: 661 VEAKLDKGRGPVATILVQEGTLKSGDYFVAGVHYGRVRAMQNDRGEKVLAAGPAMPVEVI 720
Query: 429 GLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEM 488
G G+P AGD + + E++A+ +++ R+ K + + K ++ E L + ++
Sbjct: 721 GFNGVPDAGDIFVAMGDEKQAKEIANHRQMKLRESELAKHSKLSLEQLYEKIQKGEVKDL 780
Query: 489 PVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVK 548
IVK DVQG+V+AV ++L+ L++ + +NV+H VG++T++DV+LA A A I+GFNV+
Sbjct: 781 NAIVKGDVQGSVEAVAESLRKLSTDAIRLNVLHASVGAITETDVNLASASNAIILGFNVR 840
Query: 549 SPPTSVSQAATQAGIKTRLLGLL 571
P + A + G+ RL ++
Sbjct: 841 -PEVKAAALAEKEGVDVRLYNII 862
>sp|A4SJR5|IF2_AERS4 Translation initiation factor IF-2 OS=Aeromonas salmonicida (strain
A449) GN=infB PE=3 SV=1
Length = 898
Score = 390 bits (1001), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/404 (51%), Positives = 279/404 (69%), Gaps = 12/404 (2%)
Query: 161 DVAELVVMELGFNV--RRIHS---------SEGTEILPRPPVVTVMGHVDHGKTSLLDAL 209
+ A+LV E+G V RR + E +E R PVVT+MGHVDHGKTSLLD +
Sbjct: 361 ETAQLVAEEMGHKVVLRRENELEEAVLSDRDETSEAKSRAPVVTIMGHVDHGKTSLLDYI 420
Query: 210 RQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVA 269
R+ + A EAGGITQH+GA+ V +G ITFLDTPGHAAF++MR RGA TDIVVLVVA
Sbjct: 421 RKAKVAAGEAGGITQHIGAYHVETDSGM-ITFLDTPGHAAFTSMRARGAKSTDIVVLVVA 479
Query: 270 ADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQV 329
ADDGVMPQT+EAI HA AA VPIVVA+NK DKP ADP+RVK +L + EDWGG Q
Sbjct: 480 ADDGVMPQTIEAIQHAKAAEVPIVVAVNKIDKPEADPDRVKTELARYNVMSEDWGGDSQF 539
Query: 330 VEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGT 389
V VSA G+DDL A+L+Q+E++ LKA VDG A V+E+ LDKGRGP+ T +V+ GT
Sbjct: 540 VHVSAKSGEGIDDLLEAILIQSEVLELKAVVDGMASGVVIESFLDKGRGPVATVLVQEGT 599
Query: 390 LVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERA 449
L G V+ G E+GRIRA+RD +G+ +A P++PVEI GL G+P AGD+ VV E++A
Sbjct: 600 LRQGDIVLCGLEYGRIRAMRDELGREIKEAGPSLPVEILGLSGVPSAGDEATVVRDEKKA 659
Query: 450 RMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKT 509
R ++ R+ KF ++ + + + EN+ + + +E+ V++KADVQG+VQA+ DAL
Sbjct: 660 REVALYRQGKFRDVKLARQQKAKLENMFANMTEGEVSEVNVVIKADVQGSVQAICDALVQ 719
Query: 510 LNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTS 553
L++ ++ V +V GVG +T++D LA A A +VGFNV++ ++
Sbjct: 720 LSTDEVKVKIVGSGVGGITETDATLAAASSAILVGFNVRADASA 763
>sp|Q98BI8|IF2_RHILO Translation initiation factor IF-2 OS=Rhizobium loti (strain
MAFF303099) GN=infB PE=3 SV=1
Length = 860
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/405 (49%), Positives = 278/405 (68%), Gaps = 14/405 (3%)
Query: 158 LSIDVAELVVMELGFNVRRIHSSE-----------GTEILPRPPVVTVMGHVDHGKTSLL 206
+ D AELV E G VRR+ S+ +++PRPPVVT+MGHVDHGKTSLL
Sbjct: 318 IDADTAELVATEFGHTVRRVAESDIEEGLFNIADNAEDLVPRPPVVTIMGHVDHGKTSLL 377
Query: 207 DALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVL 266
DA+R ++V+ EAGGITQH+GA+ V G ITF+DTPGHAAF+AMR RGA TDI +L
Sbjct: 378 DAIRNANVVSGEAGGITQHIGAYQV-EKNGQKITFIDTPGHAAFTAMRARGAQATDIAIL 436
Query: 267 VVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGK 326
VVAADD VMPQT+E+I+HA AA VPI+VAINK DK ADP++V+++L + +E GG+
Sbjct: 437 VVAADDSVMPQTIESISHAKAAGVPIIVAINKIDKHDADPQKVRSELLRHEVFVESMGGE 496
Query: 327 VQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVK 386
V VEVSA K T LD L A+LLQAE+++LKA D A+ V+EA+LDKGRGP+ T +V+
Sbjct: 497 VLDVEVSATKGTNLDKLLEAILLQAEILDLKANPDRTAEGVVIEAQLDKGRGPVATVLVQ 556
Query: 387 AGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSE 446
GTL+ G +V G+EWGR+RA+ + G+ +A PAMPVE+ GL+G P+AGD VV++E
Sbjct: 557 TGTLMPGDILVAGNEWGRVRALVNDRGEQIKEAPPAMPVEVLGLQGTPLAGDRFAVVNNE 616
Query: 447 ERARMLSSGRKKKFEKDRVRKINEER--TENLEPSEDVPKRAEMPVIVKADVQGTVQAVT 504
RAR ++ R++ + V K +R E + E P+++K DVQG+++A+
Sbjct: 617 ARAREITEYRQRLAREKAVAKHAGQRGSLEQMMSQLQTSGLKEFPLVIKGDVQGSIEAIN 676
Query: 505 DALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKS 549
AL L + ++ +VH G G++T+SDV LA+ GA I+GFNV++
Sbjct: 677 AALDKLGTDEVRARIVHAGAGAITESDVSLAETSGAAIIGFNVRA 721
>sp|Q2RJM5|IF2_MOOTA Translation initiation factor IF-2 OS=Moorella thermoacetica
(strain ATCC 39073) GN=infB PE=3 SV=1
Length = 903
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 230/520 (44%), Positives = 330/520 (63%), Gaps = 36/520 (6%)
Query: 65 ARRRD-EDSFGLKTARRESNKGKFRKREIGKPPVEAAYVPPKPKKTVKSSQDKTVDIFEG 123
+R+R+ E+ + RR+ NKGK +K + PK K + +
Sbjct: 289 SRKREMENQLEERLMRRDKNKGKAQKHK------------ETPKVVFK------ITLTGS 330
Query: 124 MAVVELAKQSGASITTLQDILVNVG--EKVDSEFEPLSIDVAELVVMELGFNVRRIHSSE 181
+ V ELAK+ G + + L+ G ++ E L ++ A LV +LG V
Sbjct: 331 ITVQELAKRIGKTAAEVIKYLMGQGIMATINQE---LDLETAALVAQDLGAIVEIKAEKP 387
Query: 182 GTEI----------LPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVV 231
TE+ RPPVVTVMGHVDHGKTSLLDA+R+T++ A EAGGITQH+GA+ V
Sbjct: 388 ITELEDLVDPPETLRERPPVVTVMGHVDHGKTSLLDAIRRTNVTASEAGGITQHIGAYQV 447
Query: 232 GMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVP 291
+ ITFLDTPGHAAF+AMR RGA TDI +LVVAADDGVMPQT+EAI HA AA VP
Sbjct: 448 RLKN-RKITFLDTPGHAAFTAMRARGAQATDIAILVVAADDGVMPQTIEAINHAKAAGVP 506
Query: 292 IVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQA 351
IVVAINK D+P A+PERVK QL GL E+WGG +V VSAV K G++DL +LL A
Sbjct: 507 IVVAINKIDRPEANPERVKQQLTEYGLVPEEWGGDTIMVPVSAVTKEGINDLLEMVLLTA 566
Query: 352 EMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDM 411
++ LKA D PA+ V+EA+LD+GRGP+ T +V+ GTL G ++V G +GR+RA+ D
Sbjct: 567 DVAELKANPDRPARGIVIEAKLDRGRGPVATMLVQKGTLKIGDNLVAGSVYGRVRAMIDD 626
Query: 412 VGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEE 471
G+ + A P+ PVE+ GL LP AGD VV+ E+ AR ++S R+++ ++ ++ ++
Sbjct: 627 RGERVNSAPPSTPVEVLGLSELPEAGDIFQVVEDEKLARQIASSRQEEKRQEELKAASKT 686
Query: 472 RTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSD 531
++L + + E+ +++K DVQG+V+A+ AL+ L++ ++ VN++H GVG++T++D
Sbjct: 687 TLDDLFKQMEAGEVKELNLVIKGDVQGSVEALRGALEQLSTSEVKVNLLHGGVGAITETD 746
Query: 532 VDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
V LA A A I+GFNV+ P +V +AA +AG++ RL ++
Sbjct: 747 VMLAAASKAIIIGFNVR-PEANVRKAAEEAGVEIRLYRVI 785
>sp|A5EWY9|IF2_DICNV Translation initiation factor IF-2 OS=Dichelobacter nodosus (strain
VCS1703A) GN=infB PE=3 SV=1
Length = 879
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/375 (51%), Positives = 272/375 (72%), Gaps = 2/375 (0%)
Query: 179 SSEGTEILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGAS 238
S +++ R PVVT+MGHVDHGKTSLLD +R T +V+ EAGGITQH+GA+ V G
Sbjct: 372 SENKMDVVVRAPVVTIMGHVDHGKTSLLDYIRHTRVVSGEAGGITQHIGAYRVTTERGV- 430
Query: 239 ITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINK 298
ITFLDTPGHAAF+AMR RGA VTDIVVLVVAADDGVMPQT EAI HA AANVP++VA+NK
Sbjct: 431 ITFLDTPGHAAFTAMRARGANVTDIVVLVVAADDGVMPQTKEAIQHAKAANVPLIVAVNK 490
Query: 299 CDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKA 358
DKP ADPERVK++L EG+ E+WGG+ VSA G+DDL +L+QAEM+ L A
Sbjct: 491 MDKPEADPERVKSELSQEGVISEEWGGEHLFAYVSAKSGMGIDDLLEKILIQAEMLELTA 550
Query: 359 RVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDK 418
G + VVE+RLD+GRG + T +V++G + G ++ G E+GRIRA+ D GK ++
Sbjct: 551 PSSGVGKGVVVESRLDRGRGSVATVLVQSGVMKKGNVMLAGMEYGRIRAMLDEKGKELEE 610
Query: 419 ARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEP 478
A P+ PVEI GL G P AGDD+I+V++E +AR +++ R+ KF++ R+ + + + ENL
Sbjct: 611 AGPSTPVEILGLSGTPNAGDDVIIVENERKAREIANFRQGKFKEIRIARQQKTKLENLFN 670
Query: 479 SEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQAC 538
+ D + +++ +++KADVQG+V+A+ D+L+ L++ ++ VN++ G+G +T+SDV LA A
Sbjct: 671 NAD-GEISKVSLMIKADVQGSVEALADSLRELSTDEVAVNIIATGIGGITESDVQLALAS 729
Query: 539 GACIVGFNVKSPPTS 553
A I+ FNV++ +
Sbjct: 730 SATIIAFNVRAEANA 744
>sp|Q3SKX1|IF2_THIDA Translation initiation factor IF-2 OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=infB PE=3 SV=1
Length = 922
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/431 (46%), Positives = 295/431 (68%), Gaps = 9/431 (2%)
Query: 141 QDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRIHSSEGTEILPRPPVVTVMGHVDH 200
Q+ + V E++ +P ++D E ++E G E++ RPPVVTVMGHVDH
Sbjct: 383 QETAIIVVEEMGHIGKPAALDTPEAFLIETG-------EPGEAEMVARPPVVTVMGHVDH 435
Query: 201 GKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAV 260
GKTSLLD +R+T + + EAGGITQH+GA+ V G ITFLDTPGH AF+AMR RGA
Sbjct: 436 GKTSLLDTIRRTRVASGEAGGITQHIGAYHVETEKGV-ITFLDTPGHEAFTAMRARGAKA 494
Query: 261 TDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLEL 320
TDIVVLVVAADDGVMPQT+EAI HA AA VP+VVA+NK DKP A+PER++ +L A+G+
Sbjct: 495 TDIVVLVVAADDGVMPQTIEAIHHAKAAGVPLVVAVNKIDKPDANPERIRQELVAQGVTP 554
Query: 321 EDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPL 380
E+WGG Q VEVSA T ++ L A+LLQAE++ L+A DGPA+ V+EARLDKG+GP+
Sbjct: 555 EEWGGDTQFVEVSAKANTNINGLLDAILLQAEVLELQAPADGPAKGIVIEARLDKGKGPV 614
Query: 381 TTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDI 440
T +V++GTL G V+ G +GR+RA+ D GK+ +A P++PVEI+GL +P AG+D+
Sbjct: 615 ATLLVQSGTLRRGDMVLAGQVYGRVRAMLDEAGKTVTEAGPSIPVEIQGLSDVPQAGEDM 674
Query: 441 IVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTV 500
+V+ E +AR ++ R+ K+ ++ K + E++ + +P+I+KAD+QG+
Sbjct: 675 MVLPDERKAREIALFRQGKYRDVQLAKKQAAKLESMFDQMGQGEVQHLPIILKADMQGSY 734
Query: 501 QAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQ 560
+ + AL +++ ++ VN++H GVG++T+SDV+LA A A ++GFNV++ S + A
Sbjct: 735 EGLAHALGKISTDEVKVNIIHSGVGAITESDVNLALASKAVLIGFNVRA-DASARKLAES 793
Query: 561 AGIKTRLLGLL 571
+G+ R ++
Sbjct: 794 SGVDIRYYNII 804
>sp|C5BFB7|IF2_EDWI9 Translation initiation factor IF-2 OS=Edwardsiella ictaluri (strain
93-146) GN=infB PE=3 SV=1
Length = 901
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/404 (50%), Positives = 283/404 (70%), Gaps = 12/404 (2%)
Query: 161 DVAELVVMELGFNV--RRIHSSE---------GTEILPRPPVVTVMGHVDHGKTSLLDAL 209
+ A+LV ++G V RR + E G PR PVVT+MGHVDHGKTSLLD +
Sbjct: 363 ETAQLVAEDMGHKVILRRENELEEAVLSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYI 422
Query: 210 RQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVA 269
R T + A EAGGITQH+GA+ V G ITFLDTPGHAAF+AMR RGA TDIVVLVVA
Sbjct: 423 RSTKVAAGEAGGITQHIGAYHVQTDNGM-ITFLDTPGHAAFTAMRARGAQATDIVVLVVA 481
Query: 270 ADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQV 329
ADDGVMPQT+EA+ HA AA VP+VVA+NK DKP ADP+RVKN+L G+ E+WGG+ Q
Sbjct: 482 ADDGVMPQTIEAVQHAKAAGVPLVVAVNKIDKPEADPDRVKNELSQYGVMPEEWGGEAQF 541
Query: 330 VEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGT 389
V VSA TG+D+L A+LLQAE++ LKA +G A V+E+ LDKGRGP+ T +V+ GT
Sbjct: 542 VHVSAKAGTGIDELLDAILLQAEVLELKAVRNGMASGVVIESFLDKGRGPVATVLVREGT 601
Query: 390 LVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERA 449
L G V+ G E+GR+RA+RD +G+ +A P++PVEI G+ G+P AGD+ VV E++A
Sbjct: 602 LNKGDIVLCGFEYGRVRAMRDELGREITEAGPSIPVEILGMSGVPAAGDEATVVRDEKKA 661
Query: 450 RMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKT 509
R ++ R+ KF + ++ + + + EN+ + + +E+ +++KADVQG+V+A+ D+L+
Sbjct: 662 REVALYRQGKFREVKLARQQKAKLENMFSNMVEGEVSELNIVLKADVQGSVEAIADSLRK 721
Query: 510 LNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTS 553
L++ ++ V +V GVG +T++D LA A A ++GFNV++ ++
Sbjct: 722 LSTDEVKVKIVGSGVGGITETDATLAAASNAILLGFNVRADASA 765
>sp|A5GF86|IF2_GEOUR Translation initiation factor IF-2 OS=Geobacter uraniireducens
(strain Rf4) GN=infB PE=3 SV=1
Length = 882
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/498 (44%), Positives = 317/498 (63%), Gaps = 18/498 (3%)
Query: 84 KGKFRKREIGKPPVEAAYVPPKPKKTVKSSQDKTVDIFEGMAVVELAKQSGASITTLQDI 143
+GK +KR VE V K + TV + + + I E + V ELAK+ G T L
Sbjct: 275 RGKGKKRH-----VEKVSVGKKTEITVPKAIKRIIKISETITVGELAKRMGIKATDLIRA 329
Query: 144 LVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRI---------HSSEGTE-ILPRPPVVT 193
L+ +G + + PL +D A L+ E G+ + + + + E ++ RPPVVT
Sbjct: 330 LMKMG-VMATINHPLDVDTATLLATEFGYEIENVALDIDEILESAPDALESLVKRPPVVT 388
Query: 194 VMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAM 253
+MGHVDHGKTSLLDA+R+ +++A EAGGITQH+GA+ V ++ G ITFLDTPGH AF+AM
Sbjct: 389 IMGHVDHGKTSLLDAIREANVIAGEAGGITQHIGAYDVELN-GRKITFLDTPGHEAFTAM 447
Query: 254 RKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQL 313
R RGA VTDIV+LVVAADDGVMPQT EA+ H+ AA VPI+VA+NK DKP A PERVK +L
Sbjct: 448 RARGAKVTDIVILVVAADDGVMPQTREAVNHSKAAGVPIIVAVNKIDKPEAKPERVKQEL 507
Query: 314 GAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARL 373
GL E+WGG VEVSA K+ L L +LLQA+++ LKA + A+ +VEA+L
Sbjct: 508 MELGLVSEEWGGDTIFVEVSAKKRINLPSLLEMVLLQADVLELKANPEKAARGTIVEAKL 567
Query: 374 DKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGL 433
DKGRGP+ T +V+ GTL G + V G +GR+RA+++ G A P+MP E+ G G+
Sbjct: 568 DKGRGPVATVLVQEGTLKVGDYFVAGVHFGRVRAMQNDRGDKVLSAGPSMPAEVIGFTGV 627
Query: 434 PMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMPVIVK 493
P AGD + + E++A+ ++S R++K + + K + E L + + ++ VIVK
Sbjct: 628 PDAGDVFVALADEKQAKEIASLRQQKLRETELAKHTKLSLEQLYEKIQMGEVKDLNVIVK 687
Query: 494 ADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTS 553
DVQG+V+AV ++L+ L++ + +NV+H VG++T++DV+LA A A I+GFNV+ P
Sbjct: 688 GDVQGSVEAVAESLRKLSTDAIRLNVIHASVGAITETDVNLATASNAIILGFNVR-PEVK 746
Query: 554 VSQAATQAGIKTRLLGLL 571
A + G+ RL ++
Sbjct: 747 AQALAEKEGVDVRLYNII 764
>sp|Q5QTY8|IF2_IDILO Translation initiation factor IF-2 OS=Idiomarina loihiensis (strain
ATCC BAA-735 / DSM 15497 / L2-TR) GN=infB PE=3 SV=1
Length = 896
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/446 (47%), Positives = 296/446 (66%), Gaps = 13/446 (2%)
Query: 115 DKTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNV 174
++ V I E + V ELA + + L ++ +GE V + + L D A LVV ELG
Sbjct: 314 ERDVKIGETITVGELANRMAVKASDLIKTMMKMGEMV-TINQILDQDTAALVVEELGHKP 372
Query: 175 RRIHSS-----------EGTEILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGIT 223
+ + EG E PR PVVTVMGHVDHGKTSLLD +R+ + + EAGGIT
Sbjct: 373 ALVKDNALEEEVLSDRQEGGEEAPRAPVVTVMGHVDHGKTSLLDYIRKAKVASGEAGGIT 432
Query: 224 QHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIA 283
QH+GA+ V G +TFLDTPGHAAF++MR RGA TD+V+LVVAADDGVMPQT EA+
Sbjct: 433 QHIGAYHVETGHGM-VTFLDTPGHAAFTSMRARGAGATDVVILVVAADDGVMPQTKEAVQ 491
Query: 284 HANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDL 343
HA AA VP+VVAINK DK ADP+RVKN+L + EDWGG VQ + +SA G+D+L
Sbjct: 492 HAKAAGVPLVVAINKMDKEGADPDRVKNELSQLEVIPEDWGGDVQFIPLSAHTGEGIDEL 551
Query: 344 EVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWG 403
A+LLQ+E+++L+A G A VVE+RLD+GRGP+ T +V+ G L G V+ G E+G
Sbjct: 552 LEAILLQSEVLDLRAEKTGMASGIVVESRLDRGRGPVATVLVQRGLLKQGDVVLCGLEYG 611
Query: 404 RIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKD 463
RIRA+RD GK +A P++PVEI GL G+P AGD+ VV E +AR +++ R+ K+
Sbjct: 612 RIRAMRDETGKEIKEAGPSIPVEILGLSGVPQAGDEATVVRDERKAREVANYRQGKYRDV 671
Query: 464 RVRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVG 523
++ K + + EN+ AE+ +++K+DVQG+++A++DAL L++ ++ VN++ G
Sbjct: 672 KLAKQQKAKLENMFADMAEGDVAELNIVLKSDVQGSLEAISDALTKLSTDEVKVNIIGSG 731
Query: 524 VGSVTQSDVDLAQACGACIVGFNVKS 549
VG +T++D+ LA A A +VGFNV++
Sbjct: 732 VGGITETDISLASASNAIVVGFNVRA 757
>sp|Q1GCH2|IF2_RUEST Translation initiation factor IF-2 OS=Ruegeria sp. (strain TM1040)
GN=infB PE=3 SV=1
Length = 835
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/468 (44%), Positives = 311/468 (66%), Gaps = 14/468 (2%)
Query: 116 KTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVR 175
+ V + E + V ELA + + + L+N+G V ++ + + D AEL++ E G NV
Sbjct: 251 RDVQLPEAIVVSELANRMAERVADVVKALMNMGMMV-TQNQTIDADTAELIIEEFGHNVV 309
Query: 176 RIHSSEGTEIL-----------PRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQ 224
R+ ++ +++ PRPPV+T+MGHVDHGKTSLLDA+R +VA EAGGITQ
Sbjct: 310 RVSDADVEDVIKEIEDKEEDLQPRPPVITIMGHVDHGKTSLLDAIRDAKVVAGEAGGITQ 369
Query: 225 HMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAH 284
H+GA+ V +GA ++FLDTPGHAAF++MR RGA VTDIVVLVVAADD VMPQT+EAI H
Sbjct: 370 HIGAYQVTTDSGAVLSFLDTPGHAAFTSMRSRGAQVTDIVVLVVAADDSVMPQTVEAINH 429
Query: 285 ANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLE 344
A AA VP++VAINK DKPAADP +V+ +L + +E G+VQ VEVSA GLD+L
Sbjct: 430 AKAAGVPMIVAINKIDKPAADPNKVRAELLQHEVIVEAMSGEVQDVEVSAHTGQGLDELL 489
Query: 345 VALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGR 404
A+ LQAE++ LKA + AQ V+EA+LD GRGP+ T +V+ GTL G VVG ++G+
Sbjct: 490 EAIALQAEILELKANPNRAAQGAVIEAQLDVGRGPVATVLVQTGTLRQGDIFVVGEQYGK 549
Query: 405 IRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDR 464
+RA+ + G+ +A P++PVE+ GL G P AGD + V ++E +AR ++ R++ + R
Sbjct: 550 VRALINDKGERVKEAGPSVPVEVLGLNGTPEAGDVLNVTETEAQAREIAEYREQAAKDKR 609
Query: 465 VRKINEERTENL-EPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVG 523
E L + +++ +E+P++VKADVQG+ +A+ A++ + + ++ V V+H G
Sbjct: 610 AAAGAATTLEQLMQKAKEDENVSELPILVKADVQGSAEAIVQAMEKIGNDEVRVRVLHSG 669
Query: 524 VGSVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
VG++T++D+ LA+A GA ++GFNV++ S A Q G++ R ++
Sbjct: 670 VGAITETDIGLAEASGAPVMGFNVRA-NASARNTANQKGVEIRYYSVI 716
>sp|Q8EHL5|IF2_SHEON Translation initiation factor IF-2 OS=Shewanella oneidensis (strain
MR-1) GN=infB PE=3 SV=1
Length = 885
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/540 (42%), Positives = 327/540 (60%), Gaps = 30/540 (5%)
Query: 32 AESSCSCLQGLRYHDVSMKVSLI-RCFHASPELLARRRDEDSFGLKTAR--------RES 82
AE L+ RY D + S + R S ++ +R + TA+ R+
Sbjct: 215 AEEERQRLEAERYSDHHITTSKVARAAEDSSDMDEEKRGRRARNKNTAKTKRGGKDARDG 274
Query: 83 NKGKFRKREIGKPPVEAAYVPPKPKKTVKSSQDKTVDIFEGMAVVELAKQSGASITTLQD 142
+ R R P A+ KP V ++ V I E + V ELA T +
Sbjct: 275 REKHMRNRST--APESMAHGFNKPVAAV----NRDVRIGETVTVAELAHLMAVKATEIIK 328
Query: 143 ILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRIHSSE-------------GTEILPRP 189
++ +G V + + L + A+LV E+G V I +E G ++ PR
Sbjct: 329 QMMKMGSMV-TINQVLDQETAQLVAEEMGHKVVLIRENELEQQVLSERDEEGGVKLEPRA 387
Query: 190 PVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAA 249
PVVT+MGHVDHGKTSLLD +R+ + A EAGGITQH+GA+ V G ITFLDTPGHAA
Sbjct: 388 PVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETENGM-ITFLDTPGHAA 446
Query: 250 FSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERV 309
F+AMR RGA TDIVVLVVAADDGVMPQT+EAI HA A NVP++VA+NK DKP AD +RV
Sbjct: 447 FTAMRARGAKATDIVVLVVAADDGVMPQTIEAIQHAKAGNVPLIVAVNKMDKPEADIDRV 506
Query: 310 KNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVV 369
K++L G+ EDWGG VSA G+DDL +LLQAE++ LKA DG A V+
Sbjct: 507 KSELSQHGVMSEDWGGDNMFAFVSAKTGAGVDDLLEGILLQAEVLELKAVRDGMAAGVVI 566
Query: 370 EARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEG 429
E++LDKGRGP+ T +V+ GTL G V+ G E+G+IRA++D G+S +A P++PVEI G
Sbjct: 567 ESQLDKGRGPVATILVQEGTLRQGDIVLCGLEYGKIRAMKDENGRSITEAGPSIPVEILG 626
Query: 430 LKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMP 489
L G+P AGD+ VV E +AR ++ R+ KF ++ + + + EN+ + + E+
Sbjct: 627 LSGVPSAGDEATVVRDERKAREVALYRQGKFRDVKLARQQKSKLENMFANMTEGEVKELN 686
Query: 490 VIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKS 549
+++KADVQG+++A+TD+L L++ ++ VN++ GVG++T++D LA A A +VGFNV++
Sbjct: 687 IVLKADVQGSLEAITDSLMGLSTDEVKVNIIARGVGALTETDATLAAASNAIMVGFNVRA 746
>sp|A9HF18|IF2_GLUDA Translation initiation factor IF-2 OS=Gluconacetobacter
diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5)
GN=infB PE=3 SV=1
Length = 907
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 231/470 (49%), Positives = 312/470 (66%), Gaps = 17/470 (3%)
Query: 116 KTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVR 175
+ V + E + V ELA + A + L+ +G + + + L D AELVV E G VR
Sbjct: 325 RDVILPETITVQELANRMAARQGEVIKALMKMG-VMATVTQSLDADTAELVVQEFGHRVR 383
Query: 176 RIHSS------EGTE-----ILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQ 224
R+ S EG E +LPRPPVVTVMGHVDHGKTSLLDALR T + A EAGGITQ
Sbjct: 384 RVADSDVEIGIEGIEDQPEDLLPRPPVVTVMGHVDHGKTSLLDALRTTDVAAAEAGGITQ 443
Query: 225 HMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAH 284
H+GA+ V + +G+ ITF+DTPGH AF+AMR RGA+VTD+VVLVVAADDGVMPQT+EAI H
Sbjct: 444 HIGAYQVTLPSGSKITFIDTPGHEAFTAMRARGASVTDVVVLVVAADDGVMPQTIEAIRH 503
Query: 285 ANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLE 344
A AAN PI+VAINKCDKP A+PERV+ +L + + +E GG Q VEVSA+K+TGLD LE
Sbjct: 504 AKAANAPIIVAINKCDKPGANPERVRQELLSHEIVVESMGGDTQDVEVSALKRTGLDKLE 563
Query: 345 VALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGR 404
A+LLQAEM++L+A D A+ V+E+RLD+GRGP+ T +V+ GTL G VV G EWGR
Sbjct: 564 EAILLQAEMLDLRANPDRVAEGSVIESRLDRGRGPVATVLVQKGTLRRGDIVVAGAEWGR 623
Query: 405 IRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDR 464
+RA+ D G+ +A PAMPVEI G+ G+P AG+ +VVD+E RAR +S R++ +DR
Sbjct: 624 VRAMLDDRGRQIQEAAPAMPVEILGIAGVPGAGEPFVVVDNENRAREISEFRQRVI-RDR 682
Query: 465 V---RKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVH 521
+ + + + E+ V++KADVQG+ +A+ + L ++ V V+
Sbjct: 683 TAAGQTAARGTLDQMLARIQAGAQKEVAVLIKADVQGSAEALQATVLKLEHEEVKVRVLT 742
Query: 522 VGVGSVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
GVG +T+SDV LA+A A I+ FNV++ T + A + G+ R ++
Sbjct: 743 AGVGQITESDVQLAKASDAVIIAFNVRA-TTQARELAQREGVDIRYYSII 791
>sp|Q16D38|IF2_ROSDO Translation initiation factor IF-2 OS=Roseobacter denitrificans
(strain ATCC 33942 / OCh 114) GN=infB PE=3 SV=1
Length = 824
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/471 (45%), Positives = 306/471 (64%), Gaps = 20/471 (4%)
Query: 116 KTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVR 175
+ V + E + V ELA + + + L+N G V ++ + + D AEL+V E G +
Sbjct: 240 RDVQVPEAIVVSELANRMSEKVGEVVKALMNNGMMV-TQNQAIDADTAELIVQEFGHRIV 298
Query: 176 RIHSSEGTEILP-----------RPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQ 224
R+ ++ +++ RPPVVT+MGHVDHGKTSLLDA+R+ +VA EAGGITQ
Sbjct: 299 RVSDADVEDVIKEVEDDEADLKTRPPVVTIMGHVDHGKTSLLDAIRKAKVVAGEAGGITQ 358
Query: 225 HMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAH 284
H+GA+ V +G ++FLDTPGHAAF++MR RGA VTDIVVLVVAADD VMPQT+EAI H
Sbjct: 359 HIGAYQVKTDSGQLLSFLDTPGHAAFTSMRSRGAQVTDIVVLVVAADDAVMPQTIEAINH 418
Query: 285 ANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLE 344
A AA VP++VAINK D+PAADP +V+ L + +E G VQ VEVSA+ GLDDL
Sbjct: 419 AKAAEVPMIVAINKIDRPAADPTKVRTDLLQHEVIVEQMSGDVQDVEVSAITGQGLDDLL 478
Query: 345 VALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGR 404
A+ LQAE++ LKA + AQ V+EA+LD GRGP+ T +V+ GTL G VVG ++G+
Sbjct: 479 EAIALQAEILELKANPNRAAQGAVIEAQLDVGRGPVATVLVQNGTLRQGDIFVVGEQYGK 538
Query: 405 IRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDR 464
+RA+ + G+ +A P++PVE+ GL G P AGD + V +E +AR ++S R + R
Sbjct: 539 VRALINDQGERVKEAGPSVPVEVLGLNGTPEAGDVLNVTSTEAQAREIASYRANAAKDKR 598
Query: 465 ----VRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVV 520
E+ N + EDV +E+P++VKADVQG+ +A+ A++ + + ++ V V+
Sbjct: 599 AAAGAATTLEQLMANAKADEDV---SELPILVKADVQGSAEAIVQAMEKIGNDEVRVRVL 655
Query: 521 HVGVGSVTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
H GVG++T++DV LA+A GA I+GFNV++ S A Q G++ R ++
Sbjct: 656 HSGVGAITETDVGLAEASGAPIMGFNVRA-NASARNTANQKGVELRYYSII 705
>sp|Q6FF40|IF2_ACIAD Translation initiation factor IF-2 OS=Acinetobacter sp. (strain
ADP1) GN=infB PE=3 SV=1
Length = 899
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 232/525 (44%), Positives = 328/525 (62%), Gaps = 49/525 (9%)
Query: 68 RDEDSF------GLKTARRESNKGKFRKREIGKPPVEAAYVPPKPKKTVKSSQDKTVDIF 121
++E SF GLKT+ ++NK F K PV KK V V+I
Sbjct: 285 QEEQSFKSHHKRGLKTS--QANKHGFEK------PV---------KKQVYD-----VEIG 322
Query: 122 EGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRIHSSE 181
+ V +LA++ + + L+ +GE V ++ + + D A LVV E+G N + ++
Sbjct: 323 STIVVADLAQKMAIKVREVIKTLMKMGELV-TQNQSIDQDTAALVVEEMGHNPILVSDTQ 381
Query: 182 GTEIL------------PRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAF 229
+ L RPPVVT+MGHVDHGKTSLLD +R++ + A EAGGITQH+GA+
Sbjct: 382 AEDNLLEAAEEARGEQTTRPPVVTIMGHVDHGKTSLLDRIRRSKVAAGEAGGITQHIGAY 441
Query: 230 VVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAAN 289
V G ITFLDTPGHAAF+AMR RGA TDIVVLVVAADDGVMPQT EAI HA AA
Sbjct: 442 HVETDKGI-ITFLDTPGHAAFTAMRSRGAKATDIVVLVVAADDGVMPQTAEAIDHARAAG 500
Query: 290 VPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLL 349
PI+VAINK DK +ADP+RV N+L + + E WGG V V VSA G+D+L +L+
Sbjct: 501 TPIIVAINKMDKESADPDRVLNELTTKQIVPEQWGGDVPVAMVSAHSGQGIDELLDLILI 560
Query: 350 QAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIR 409
Q+E+M LKA +G AQ V+EAR+DKGRG +T+ +V+ GTL G V+ G +GR+RA+
Sbjct: 561 QSELMELKASGEGAAQGVVIEARVDKGRGAVTSILVQNGTLNIGDLVLAGSSYGRVRAMS 620
Query: 410 DMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKIN 469
D G+ A P++PVEI GL PMAGD+++VV+ E++AR ++ R + + R+ + +
Sbjct: 621 DENGQPIKSAGPSIPVEILGLPDAPMAGDEVLVVNDEKKAREVADARADRERQKRIERQS 680
Query: 470 EERTENLEPS---EDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGS 526
R EN+ S +DVP + V++KADV+GT++A+T AL L+ ++ V V+ GVG+
Sbjct: 681 AMRLENIMASMGKKDVPT---VNVVLKADVRGTLEALTAALNELSMDEVRVRVISSGVGA 737
Query: 527 VTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
+T+SDV LA++ A ++GFNV++ T+ Q + Q GI R ++
Sbjct: 738 ITESDVTLAESSEAVLLGFNVRA-DTTARQKSDQDGIDIRYYSII 781
>sp|Q8DBW0|IF2_VIBVU Translation initiation factor IF-2 OS=Vibrio vulnificus (strain
CMCP6) GN=infB PE=3 SV=1
Length = 907
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 212/463 (45%), Positives = 303/463 (65%), Gaps = 14/463 (3%)
Query: 120 IFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNV--RRI 177
I E + V ELA + T + I++ +G + + + + + A+LV E+G V R+
Sbjct: 329 IGETIVVSELANKMSVKATEVIKIMMKMG-AMATINQVIDQETAQLVAEEMGHKVVLRKE 387
Query: 178 HSSEGT---------EILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGA 228
+ E E +PR PVVT+MGHVDHGKTS LD +R+T + + EAGGITQH+GA
Sbjct: 388 NELEEAVLSDRDNMFEAVPRAPVVTIMGHVDHGKTSTLDYIRRTHVASGEAGGITQHIGA 447
Query: 229 FVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAA 288
+ V G ITFLDTPGHAAF+AMR RGA TDIVVLVVAADDGVMPQT+EAI HA AA
Sbjct: 448 YHVETENGM-ITFLDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAA 506
Query: 289 NVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALL 348
VP++VA+NK DK A+P+ VKN+L + E+WGG+ V +SA + T +D L +L
Sbjct: 507 GVPLIVAVNKIDKEEANPDNVKNELSQYNVMPEEWGGENMFVHISAKQGTNIDQLLETIL 566
Query: 349 LQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAI 408
LQAE++ L A DG A VVE+RLDKGRGP+ T +V++GTL G V+ G E+GR+RA+
Sbjct: 567 LQAEVLELTAVKDGMASGVVVESRLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVRAM 626
Query: 409 RDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKI 468
RD +G ++A P++PVEI GL G+P AGD+ VV E +AR +++ R KF + ++ +
Sbjct: 627 RDEIGNEVNEAGPSIPVEILGLSGVPAAGDEATVVRDERKAREVANYRAGKFREVKLARQ 686
Query: 469 NEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVT 528
+ + EN+ + AE+ +++KADVQG+V+A+ D+L L++ ++ VN+V GVG +T
Sbjct: 687 QKSKLENMFSNMAAGDVAELNIVLKADVQGSVEAIADSLTKLSTEEVKVNIVGSGVGGIT 746
Query: 529 QSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
++D LA+A A I+GFNV++ S +A A I R ++
Sbjct: 747 ETDAVLAEASNAIILGFNVRA-DASARRAIEAASIDLRYYSII 788
>sp|A0KTZ6|IF2_SHESA Translation initiation factor IF-2 OS=Shewanella sp. (strain ANA-3)
GN=infB PE=3 SV=1
Length = 889
Score = 385 bits (988), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/498 (44%), Positives = 314/498 (63%), Gaps = 20/498 (4%)
Query: 66 RRRDEDSFGLKTARRESNKGKFRK-REIGKPPVEAAYVPPKPKKTVKSSQDKTVDIFEGM 124
R R++++ K +++ G+ + R P A+ KP V + V I E +
Sbjct: 259 RARNKNTAKTKRGGKDARDGREKHMRNRSTAPESMAHGFNKPVAAVT----RDVRIGETV 314
Query: 125 AVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRIHSSE--- 181
V ELA T + ++ +G V + L + A+LV E+G V I +E
Sbjct: 315 TVAELAHLMAVKATEIIKQMMKMGSMVTIN-QVLDQETAQLVAEEMGHKVVLIRENELEQ 373
Query: 182 ----------GTEILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVV 231
G ++ PR PVVT+MGHVDHGKTSLLD +R+ + A EAGGITQH+GA+ V
Sbjct: 374 QVLSERDEEGGVKLEPRAPVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHV 433
Query: 232 GMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVP 291
G ITFLDTPGHAAF+AMR RGA TDIVVLVVAADDGVMPQT+EAI HA A NVP
Sbjct: 434 ETENGM-ITFLDTPGHAAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIQHAKAGNVP 492
Query: 292 IVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQA 351
++VA+NK DKP AD +RVK++L G+ EDWGG VSA G+DDL +LLQA
Sbjct: 493 LIVAVNKMDKPEADIDRVKSELAQHGVMSEDWGGDNMFAFVSAKTGAGVDDLLEGILLQA 552
Query: 352 EMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDM 411
E++ LKA DG A V+E++LDKGRGP+ T +V+ GTL G V+ G E+G+IRA++D
Sbjct: 553 EVLELKAVRDGMAAGVVIESQLDKGRGPVATILVQEGTLRQGDIVLCGLEYGKIRAMKDE 612
Query: 412 VGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEE 471
G+S +A P++PVEI GL G+P AGD+ VV E +AR ++ R+ KF ++ + +
Sbjct: 613 NGRSITEAGPSIPVEILGLSGVPSAGDEATVVRDERKAREVALYRQGKFRDVKLARQQKS 672
Query: 472 RTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSD 531
+ EN+ + + E+ +++KADVQG+++A+TD+L L++ ++ VN++ GVG++T++D
Sbjct: 673 KLENMFANMTEGEVKELNIVLKADVQGSLEAITDSLMGLSTDEVKVNIIARGVGALTETD 732
Query: 532 VDLAQACGACIVGFNVKS 549
LA A A +VGFNV++
Sbjct: 733 ATLAAASNAIMVGFNVRA 750
>sp|Q0HXR5|IF2_SHESR Translation initiation factor IF-2 OS=Shewanella sp. (strain MR-7)
GN=infB PE=3 SV=1
Length = 885
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 230/540 (42%), Positives = 326/540 (60%), Gaps = 30/540 (5%)
Query: 32 AESSCSCLQGLRYHDVSMKVSLI-RCFHASPELLARRRDEDSFGLKTAR--------RES 82
AE L+ RY D + S + R S ++ +R + TA+ R+
Sbjct: 215 AEEERQRLEAERYSDHHITTSKVARAAEDSSDMDEEKRGRRARNKNTAKSKRGGKDARDG 274
Query: 83 NKGKFRKREIGKPPVEAAYVPPKPKKTVKSSQDKTVDIFEGMAVVELAKQSGASITTLQD 142
+ R R P A+ KP V ++ V I E + V ELA T +
Sbjct: 275 REKHMRNRST--APESMAHGFNKPVAAV----NRDVRIGETVTVAELAHLMAVKATEIIK 328
Query: 143 ILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRIHSSEGTE-------------ILPRP 189
++ +G V + + L + A+LV E+G V I +E + + PR
Sbjct: 329 QMMKMGSMV-TINQVLDQETAQLVAEEMGHKVVLIRENELEQQVLSERDEEGVVKLEPRA 387
Query: 190 PVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAA 249
PVVT+MGHVDHGKTSLLD +R+ + A EAGGITQH+GA+ V G ITFLDTPGHAA
Sbjct: 388 PVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETDNGM-ITFLDTPGHAA 446
Query: 250 FSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERV 309
F+AMR RGA TDIVVLVVAADDGVMPQT+EAI HA A NVP++VA+NK DKP AD +RV
Sbjct: 447 FTAMRARGAKATDIVVLVVAADDGVMPQTIEAIQHAKAGNVPLIVAVNKMDKPEADIDRV 506
Query: 310 KNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVV 369
K++L G+ EDWGG VSA G+DDL +LLQAE++ LKA DG A V+
Sbjct: 507 KSELAQHGVMSEDWGGDNMFAFVSAKTGAGVDDLLEGILLQAEVLELKAVRDGMAAGVVI 566
Query: 370 EARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEG 429
E++LDKGRGP+ T +V+ GTL G V+ G E+G+IRA++D G+S +A P++PVEI G
Sbjct: 567 ESQLDKGRGPVATILVQEGTLRQGDIVLCGLEYGKIRAMKDENGRSITEAGPSIPVEILG 626
Query: 430 LKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMP 489
L G+P AGD+ VV E +AR ++ R+ KF ++ + + + EN+ + + E+
Sbjct: 627 LSGVPSAGDEATVVRDERKAREVALYRQGKFRDVKLARQQKSKLENMFANMTEGEVKELN 686
Query: 490 VIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKS 549
+++KADVQG+++A+TD+L L++ ++ VN++ GVG++T++D LA A A +VGFNV++
Sbjct: 687 IVLKADVQGSLEAITDSLMGLSTDEVKVNIIARGVGALTETDATLAAASNAIMVGFNVRA 746
>sp|Q0HLG1|IF2_SHESM Translation initiation factor IF-2 OS=Shewanella sp. (strain MR-4)
GN=infB PE=3 SV=1
Length = 885
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 230/540 (42%), Positives = 326/540 (60%), Gaps = 30/540 (5%)
Query: 32 AESSCSCLQGLRYHDVSMKVSLI-RCFHASPELLARRRDEDSFGLKTAR--------RES 82
AE L+ RY D + S + R S ++ +R + TA+ R+
Sbjct: 215 AEEERQRLEAERYSDHHITTSKVARAAEDSSDMDEEKRGRRARNKNTAKSKRGGKDARDG 274
Query: 83 NKGKFRKREIGKPPVEAAYVPPKPKKTVKSSQDKTVDIFEGMAVVELAKQSGASITTLQD 142
+ R R P A+ KP V ++ V I E + V ELA T +
Sbjct: 275 REKHMRNRST--APESMAHGFNKPVAAV----NRDVRIGETVTVAELAHLMAVKATEIIK 328
Query: 143 ILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRIHSSEGTE-------------ILPRP 189
++ +G V + + L + A+LV E+G V I +E + + PR
Sbjct: 329 QMMKMGSMV-TINQVLDQETAQLVAEEMGHKVVLIRENELEQQVLSERDEEGVVKLEPRA 387
Query: 190 PVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAA 249
PVVT+MGHVDHGKTSLLD +R+ + A EAGGITQH+GA+ V G ITFLDTPGHAA
Sbjct: 388 PVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETDNGM-ITFLDTPGHAA 446
Query: 250 FSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERV 309
F+AMR RGA TDIVVLVVAADDGVMPQT+EAI HA A NVP++VA+NK DKP AD +RV
Sbjct: 447 FTAMRARGAKATDIVVLVVAADDGVMPQTIEAIQHAKAGNVPLIVAVNKMDKPEADIDRV 506
Query: 310 KNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVV 369
K++L G+ EDWGG VSA G+DDL +LLQAE++ LKA DG A V+
Sbjct: 507 KSELAQHGVMSEDWGGDNMFAFVSAKTGAGVDDLLEGILLQAEVLELKAVRDGMAAGVVI 566
Query: 370 EARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEG 429
E++LDKGRGP+ T +V+ GTL G V+ G E+G+IRA++D G+S +A P++PVEI G
Sbjct: 567 ESQLDKGRGPVATILVQEGTLRQGDIVLCGLEYGKIRAMKDENGRSITEAGPSIPVEILG 626
Query: 430 LKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMP 489
L G+P AGD+ VV E +AR ++ R+ KF ++ + + + EN+ + + E+
Sbjct: 627 LSGVPSAGDEATVVRDERKAREVALYRQGKFRDVKLARQQKSKLENMFANMTEGEVKELN 686
Query: 490 VIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKS 549
+++KADVQG+++A+TD+L L++ ++ VN++ GVG++T++D LA A A +VGFNV++
Sbjct: 687 IVLKADVQGSLEAITDSLMGLSTDEVKVNIIARGVGALTETDATLAAASNAIMVGFNVRA 746
>sp|B3R1E4|IF2_CUPTR Translation initiation factor IF-2 OS=Cupriavidus taiwanensis
(strain R1 / LMG 19424) GN=infB PE=3 SV=1
Length = 963
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/391 (51%), Positives = 274/391 (70%), Gaps = 2/391 (0%)
Query: 181 EGTEILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASIT 240
E E+LPRPPVVTVMGHVDHGKTSLLD +R+T + A EAGGITQH+GA+ V G IT
Sbjct: 457 EDAELLPRPPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHIGAYHVETDRGV-IT 515
Query: 241 FLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCD 300
FLDTPGH AF+AMR RGA TDIV+LVVAADDGVMPQT EAIAHA AA VPIVVAINK D
Sbjct: 516 FLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKVD 575
Query: 301 KPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARV 360
KP A+P+RVK +L AE + E++GG V VSA G++DL + LQAE++ LKA V
Sbjct: 576 KPEANPDRVKQELVAEQVVPEEYGGDSPFVPVSAKTGAGIEDLLEQVSLQAEVLELKAPV 635
Query: 361 DGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKAR 420
D PA+ VVEA+LDKG+GP+ T +V +GTL G V+ G +GR+RA+ D GK+T +A
Sbjct: 636 DAPAKGLVVEAQLDKGKGPIATILVSSGTLKRGDVVLAGSAYGRVRAMLDENGKATKEAG 695
Query: 421 PAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSE 480
P++PVEI+GL +P AG++++V+ E +AR ++ R+ KF ++ K + EN+
Sbjct: 696 PSIPVEIQGLSEVPAAGEEVLVLPDERKAREIALFRQGKFRDVKLAKQQAAKLENMLEQM 755
Query: 481 DVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGA 540
+ +P+IVKADVQG+ +A+ +L+ L++ ++ V +VH GVG +++SDV+LA A A
Sbjct: 756 TEGEVQTLPLIVKADVQGSQEALVQSLQKLSTAEVRVQIVHGGVGGISESDVNLATASKA 815
Query: 541 CIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
I+GFNV++ + A GI R ++
Sbjct: 816 VIIGFNVRA-DAGARKLAEHNGIDIRYYNII 845
>sp|A9M1D5|IF2_NEIM0 Translation initiation factor IF-2 OS=Neisseria meningitidis
serogroup C (strain 053442) GN=infB PE=3 SV=1
Length = 962
Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/368 (53%), Positives = 269/368 (73%), Gaps = 1/368 (0%)
Query: 186 LPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTP 245
LPRPPVVTVMGHVDHGKTSLLD +R+T +V EAGGITQH+GA+ V G ITFLDTP
Sbjct: 461 LPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGV-ITFLDTP 519
Query: 246 GHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAAD 305
GH AF+AMR RGA TDIV+LVVAADDGVMPQT+EAIAHA AA VP+VVA+NK DK AA+
Sbjct: 520 GHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDKEAAN 579
Query: 306 PERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQ 365
PER++ +L A + ++WGG VQ ++VSA K +D L A+LL+AE++ L A VD PA+
Sbjct: 580 PERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVDAPAK 639
Query: 366 AYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPV 425
+VEARLDKGRG + T +V++GTL G ++ G +G+IRA+ D GKS +A P++PV
Sbjct: 640 GIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEASPSIPV 699
Query: 426 EIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKR 485
EI GL +P AG+D +V+ E++AR ++ R+ K+ R+ K + EN+ + +
Sbjct: 700 EILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMGENQA 759
Query: 486 AEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGF 545
+ VI+KADVQG+ +A+ +LK L++ ++ VNV+H GVG +T+SDV+LA A GA I+GF
Sbjct: 760 QSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAFIIGF 819
Query: 546 NVKSPPTS 553
NV++ +S
Sbjct: 820 NVRADASS 827
>sp|B3PI96|IF2_CELJU Translation initiation factor IF-2 OS=Cellvibrio japonicus (strain
Ueda107) GN=infB PE=3 SV=1
Length = 930
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/465 (45%), Positives = 306/465 (65%), Gaps = 14/465 (3%)
Query: 118 VDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRI 177
+DI E +AV ELA++ + L L+ +G + S E + D A L+V ELG +
Sbjct: 352 IDIPETIAVSELAQRLTIKVGELIKRLMKMG-VMASMNEQIDQDTAVLIVEELGHKANLV 410
Query: 178 ------HSSEGT-----EILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHM 226
H+ E + E+ R PVVTVMGHVDHGKTSLLD +R+ + A EAGGITQH+
Sbjct: 411 SENDIEHALEKSLETAGELTTRAPVVTVMGHVDHGKTSLLDYIREAKVAAGEAGGITQHI 470
Query: 227 GAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHAN 286
GA+ V S G ITFLDTPGHAAF+AMR RGA TD+V+LVVAADDGVMPQT EAI HA
Sbjct: 471 GAYRVTTSRG-EITFLDTPGHAAFTAMRARGAKATDVVILVVAADDGVMPQTEEAIMHAR 529
Query: 287 AANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVA 346
AA VPIVVAINKCDKP+ADP+RV N+L A+G+ E +GG Q V+VSA G+D+L A
Sbjct: 530 AAEVPIVVAINKCDKPSADPDRVTNELVAKGVIPEAYGGDTQFVQVSAHTGQGIDELLEA 589
Query: 347 LLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIR 406
+ LQAE++ L A + A+ V+EAR+DKGRG + T +V+ GTL G ++ G +GR+R
Sbjct: 590 ISLQAEVLELTAVTNAAAKGVVIEARVDKGRGTVATVLVQQGTLKQGDLILAGQSYGRVR 649
Query: 407 AIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVR 466
A+ + G+ +A P+ PVEI GL P AGDD +V+D E +AR +++ R +K K+++
Sbjct: 650 AMVNERGEQVKEAGPSTPVEILGLDMPPSAGDDFVVLDDERKAREVAAFRAEKERKEKLA 709
Query: 467 KINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGS 526
+ + EN+ + + ++ + V++KADV+G+++A+ +L + + ++ VNV+ G+G
Sbjct: 710 RFQAAKLENMFSNMEAGQKKTLTVVIKADVRGSLEAIQASLADIGNDEVQVNVISSGIGG 769
Query: 527 VTQSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
+T++DV+LA GA IVGFNV++ + A T+ G+ R ++
Sbjct: 770 ITENDVNLAVTSGAIIVGFNVRADGATRRLAETE-GVDIRYYSII 813
>sp|Q9ZF25|IF2_ENTCL Translation initiation factor IF-2 OS=Enterobacter cloacae GN=infB
PE=3 SV=1
Length = 897
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/404 (50%), Positives = 282/404 (69%), Gaps = 12/404 (2%)
Query: 161 DVAELVVMELGFNV--RRIHSSE---------GTEILPRPPVVTVMGHVDHGKTSLLDAL 209
+ A+LV E+G V RR + E G PR PVVT+MGHVDHGKTSLLD +
Sbjct: 359 ETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYI 418
Query: 210 RQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVA 269
R T + + EAGGITQH+GA+ V G ITFLDTPGHAAF++MR RGA TDIVVLVVA
Sbjct: 419 RSTKVASGEAGGITQHIGAYHVETDNGM-ITFLDTPGHAAFTSMRARGAQATDIVVLVVA 477
Query: 270 ADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQV 329
ADDGVMPQT+EAI HA AA VP+VVA+NK DKP AD +RVKN+L G+ E+WGG+ Q
Sbjct: 478 ADDGVMPQTIEAIQHAKAAQVPLVVAVNKIDKPEADMDRVKNELSQYGVMPEEWGGEAQF 537
Query: 330 VEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGT 389
+ VSA TG+DDL A+LLQAE++ LKA +G A V+E+ LDKGRGP+ T +V+ GT
Sbjct: 538 IPVSAKAGTGIDDLLNAILLQAEVLELKAIRNGMASGAVIESFLDKGRGPVATVLVREGT 597
Query: 390 LVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERA 449
L G V+ G E+GR+RA+R+ +G+ +A P++PVEI GL G+P AGD++ VV E++A
Sbjct: 598 LNKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKA 657
Query: 450 RMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKT 509
R ++ R+ KF + ++ + + + EN+ + + E+ V++KADVQG+V+A++D+L
Sbjct: 658 REVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNVVLKADVQGSVEAISDSLLK 717
Query: 510 LNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTS 553
L++ ++ V ++ GVG +T++D LA A A +VGFNV++ ++
Sbjct: 718 LSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASA 761
>sp|A5VCZ5|IF2_SPHWW Translation initiation factor IF-2 OS=Sphingomonas wittichii
(strain RW1 / DSM 6014 / JCM 10273) GN=infB PE=3 SV=1
Length = 856
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/452 (47%), Positives = 295/452 (65%), Gaps = 13/452 (2%)
Query: 109 TVKSSQDKTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVM 168
TV+ Q + V + E + V ELA + L L +G V + + + D AEL+V
Sbjct: 268 TVQQKQVRDVAVPETITVGELANRMAERGADLVKALFKMGMPV-TVNQSIDQDTAELLVT 326
Query: 169 ELGFNVRRIHSSE----------GTEIL-PRPPVVTVMGHVDHGKTSLLDALRQTSLVAK 217
E G N++R+ S+ E L PRPPVVT+MGHVDHGKTSLLDALR T + +
Sbjct: 327 EFGHNIKRVSDSDVDLITSDDVDAAETLQPRPPVVTIMGHVDHGKTSLLDALRGTDVASG 386
Query: 218 EAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQ 277
EAGGITQH+GA+ V + +GA ITFLDTPGH AFS MR RGA +TDIVV+VVA DDG+ PQ
Sbjct: 387 EAGGITQHIGAYQVQVKSGAKITFLDTPGHEAFSEMRARGANITDIVVIVVAGDDGLRPQ 446
Query: 278 TLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKK 337
T+EAI+H AA VP+++AINK DKP ++ +RV+ L +++E GG VQ VEVSA+KK
Sbjct: 447 TIEAISHTRAAGVPMIIAINKMDKPGSNAQRVREALLQHDVQVESMGGDVQEVEVSALKK 506
Query: 338 TGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVV 397
TGLD+L + LQAE++ LKA D PA+ VVEA LDKGRG + T +V GTL G V
Sbjct: 507 TGLDELIEKIELQAELLELKANPDRPAEGTVVEATLDKGRGAVATILVGRGTLKVGDIFV 566
Query: 398 VGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRK 457
VG E G++RA+ D G++ +A P++PVEI GL G+P AGD + VV++E RAR +++ R
Sbjct: 567 VGAESGKVRALIDDKGRNIKEAGPSLPVEILGLSGVPSAGDQLSVVENEARAREVAAYRA 626
Query: 458 KKFEKDRVRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFV 517
+ R E++ + K + PV+VKAD QG+V+A+ +L +++ + V
Sbjct: 627 GVIHQKRTTAAPAS-LESMFSALREQKAQQYPVVVKADAQGSVEAIVGSLNKISTDLIQV 685
Query: 518 NVVHVGVGSVTQSDVDLAQACGACIVGFNVKS 549
++H GVG +T+SDV LA A A I+GFNV++
Sbjct: 686 RILHAGVGGITESDVSLAAASKAPIIGFNVRA 717
>sp|Q9JYD2|IF2_NEIMB Translation initiation factor IF-2 OS=Neisseria meningitidis
serogroup B (strain MC58) GN=infB PE=3 SV=1
Length = 962
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/368 (53%), Positives = 269/368 (73%), Gaps = 1/368 (0%)
Query: 186 LPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTP 245
LPRPPVVTVMGHVDHGKTSLLD +R+T +V EAGGITQH+GA+ V G ITFLDTP
Sbjct: 461 LPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGV-ITFLDTP 519
Query: 246 GHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAAD 305
GH AF+AMR RGA TDIV+LVVAADDGVMPQT+EAIAHA AA VP+VVA+NK DK AA+
Sbjct: 520 GHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDKEAAN 579
Query: 306 PERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQ 365
PER++ +L A + ++WGG VQ ++VSA K +D L A+LL+AE++ L A VD PA+
Sbjct: 580 PERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVDAPAK 639
Query: 366 AYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPV 425
+VEARLDKGRG + T +V++GTL G ++ G +G+IRA+ D GKS +A P++PV
Sbjct: 640 GIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGPSIPV 699
Query: 426 EIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKR 485
EI GL +P AG+D +V+ E++AR ++ R+ K+ R+ K + EN+ + +
Sbjct: 700 EILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMGETQA 759
Query: 486 AEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGF 545
+ VI+KADVQG+ +A+ +LK L++ ++ VNV+H GVG +T+SDV+LA A GA I+GF
Sbjct: 760 QSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAFIIGF 819
Query: 546 NVKSPPTS 553
NV++ +S
Sbjct: 820 NVRADASS 827
>sp|Q7MI09|IF2_VIBVY Translation initiation factor IF-2 OS=Vibrio vulnificus (strain
YJ016) GN=infB PE=3 SV=1
Length = 907
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/463 (45%), Positives = 303/463 (65%), Gaps = 14/463 (3%)
Query: 120 IFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNV--RRI 177
I E + V ELA + T + I++ +G + + + + + A+LV E+G V R+
Sbjct: 329 IGETIVVSELANKMSVKATEVIKIMMKMG-AMATINQVIDQETAQLVAEEMGHKVVLRKE 387
Query: 178 HSSEGT---------EILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGA 228
+ E E +PR PVVT+MGHVDHGKTS LD +R+T + + EAGGITQH+GA
Sbjct: 388 NELEEAVLSDRDNMFEAVPRAPVVTIMGHVDHGKTSTLDYIRRTHVASGEAGGITQHIGA 447
Query: 229 FVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAA 288
+ V G ITFLDTPGHAAF+AMR RGA TDIVVLVVAADDGVMPQT+EAI HA AA
Sbjct: 448 YHVETENGM-ITFLDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAA 506
Query: 289 NVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALL 348
VP++VA+NK DK A+P+ VKN+L + E+WGG+ V +SA + T +D L +L
Sbjct: 507 GVPLIVAVNKIDKEEANPDNVKNELSQYNVMPEEWGGENMFVHISAKQGTNIDQLLETIL 566
Query: 349 LQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAI 408
LQAE++ L A +G A VVE+RLDKGRGP+ T +V++GTL G V+ G E+GR+RA+
Sbjct: 567 LQAEVLELTAVKEGMASGVVVESRLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVRAM 626
Query: 409 RDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKI 468
RD +G ++A P++PVEI GL G+P AGD+ VV E +AR +++ R KF + ++ +
Sbjct: 627 RDEIGNEVNEAGPSIPVEILGLSGVPAAGDEATVVRDERKAREVANYRAGKFREVKLARQ 686
Query: 469 NEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVT 528
+ + EN+ + AE+ +++KADVQG+V+A+ D+L L++ ++ VN+V GVG +T
Sbjct: 687 QKSKLENMFSNMAAGDVAELNIVLKADVQGSVEAIADSLTKLSTEEVKVNIVGSGVGGIT 746
Query: 529 QSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
++D LA+A A I+GFNV++ S +A A I R ++
Sbjct: 747 ETDAVLAEASNAIILGFNVRA-DASARRAIEAASIDLRYYSII 788
>sp|A1KV51|IF2_NEIMF Translation initiation factor IF-2 OS=Neisseria meningitidis
serogroup C / serotype 2a (strain ATCC 700532 / FAM18)
GN=infB PE=3 SV=1
Length = 962
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/368 (53%), Positives = 269/368 (73%), Gaps = 1/368 (0%)
Query: 186 LPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLDTP 245
LPRPPVVTVMGHVDHGKTSLLD +R+T +V EAGGITQH+GA+ V G ITFLDTP
Sbjct: 461 LPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVETPRGV-ITFLDTP 519
Query: 246 GHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPAAD 305
GH AF+AMR RGA TDIV+LVVAADDGVMPQT+EAIAHA AA VP+VVA+NK DK AA+
Sbjct: 520 GHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPMVVAVNKIDKEAAN 579
Query: 306 PERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGPAQ 365
PER++ +L A + ++WGG VQ ++VSA K +D L A+LL+AE++ L A VD PA+
Sbjct: 580 PERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLEAEVLELTAPVDAPAK 639
Query: 366 AYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAMPV 425
+VEARLDKGRG + T +V++GTL G ++ G +G+IRA+ D GKS +A P++PV
Sbjct: 640 GIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGPSIPV 699
Query: 426 EIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVPKR 485
EI GL +P AG+D +V+ E++AR ++ R+ K+ R+ K + EN+ + +
Sbjct: 700 EILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMGETQA 759
Query: 486 AEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIVGF 545
+ VI+KADVQG+ +A+ +LK L++ ++ VNV+H GVG +T+SDV+LA A GA I+GF
Sbjct: 760 QSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGVGGITESDVNLAIASGAFIIGF 819
Query: 546 NVKSPPTS 553
NV++ +S
Sbjct: 820 NVRADASS 827
>sp|Q0K9B9|IF2_CUPNH Translation initiation factor IF-2 OS=Cupriavidus necator (strain
ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=infB PE=3
SV=1
Length = 962
Score = 383 bits (984), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/388 (52%), Positives = 273/388 (70%), Gaps = 2/388 (0%)
Query: 184 EILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFVVGMSTGASITFLD 243
E+LPRPPVVTVMGHVDHGKTSLLD +R+T + A EAGGITQH+GA+ V G ITFLD
Sbjct: 459 ELLPRPPVVTVMGHVDHGKTSLLDYIRRTKVAAGEAGGITQHIGAYHVETDRGV-ITFLD 517
Query: 244 TPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANVPIVVAINKCDKPA 303
TPGH AF+AMR RGA TDIV+LVVAADDGVMPQT EAIAHA AA VPIVVAINK DKP
Sbjct: 518 TPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTKEAIAHAKAAGVPIVVAINKIDKPD 577
Query: 304 ADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQAEMMNLKARVDGP 363
A+P+RVK +L AE + E++GG V VSA TG++DL +LLQAE++ L A VD P
Sbjct: 578 ANPDRVKQELVAEQVVPEEYGGDSPFVPVSAKMGTGVEDLLEQVLLQAEVLELTAPVDAP 637
Query: 364 AQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRDMVGKSTDKARPAM 423
A+ VVEA+LDKG+GP+ T +V +GTL G V+ G +GR+RA+ D GK T +A P++
Sbjct: 638 AKGLVVEAQLDKGKGPIATILVSSGTLKRGDVVLAGSAYGRVRAMLDENGKPTKEAGPSI 697
Query: 424 PVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINEERTENLEPSEDVP 483
PVEI+GL +P AG++++V+ E +AR ++ R+ KF ++ K + EN+
Sbjct: 698 PVEIQGLSEVPAAGEEVLVLPDERKAREIALFRQGKFRDVKLAKQQAAKLENMLEQMAEG 757
Query: 484 KRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVTQSDVDLAQACGACIV 543
+ +P+IVKADVQG+ +A+ +L+ L++ ++ V +VH GVG +++SDV+LA A A I+
Sbjct: 758 EVQTLPLIVKADVQGSQEALVQSLQKLSTAEVRVQIVHGGVGGISESDVNLATASKAVII 817
Query: 544 GFNVKSPPTSVSQAATQAGIKTRLLGLL 571
GFNV++ + A GI R ++
Sbjct: 818 GFNVRA-DAGARKLAEHNGIDIRYYNII 844
>sp|A5FV21|IF2_ACICJ Translation initiation factor IF-2 OS=Acidiphilium cryptum (strain
JF-5) GN=infB PE=3 SV=1
Length = 887
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/463 (46%), Positives = 307/463 (66%), Gaps = 15/463 (3%)
Query: 122 EGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAELVVMELGFNVRRIHSS- 180
E + V ELA + A + + L+ +G + + + + D AELVV E G +R+ S
Sbjct: 311 ETITVQELANRMAARVPEVVKSLMKLG-VMATATQTIDADTAELVVEEFGHRSKRVSESD 369
Query: 181 -----EG-----TEILPRPPVVTVMGHVDHGKTSLLDALRQTSLVAKEAGGITQHMGAFV 230
EG T++ RPPVVT+MGHVDHGKTSLLDALR T + A+EAGGITQH+GA+
Sbjct: 370 VELGLEGQEDSETDLKVRPPVVTIMGHVDHGKTSLLDALRSTDVAAREAGGITQHIGAYQ 429
Query: 231 VGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDGVMPQTLEAIAHANAANV 290
V + +GA +TF+DTPGH AF+AMR RGA+VTDIV+LVVAADDGVMPQT+EAI HA AANV
Sbjct: 430 VTLESGAKMTFIDTPGHEAFTAMRARGASVTDIVILVVAADDGVMPQTVEAIRHAKAANV 489
Query: 291 PIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVSAVKKTGLDDLEVALLLQ 350
PI+VAINK D+P A+P RV+++L + +E GG+ Q VEVSA+K+ GLD L+ A+LLQ
Sbjct: 490 PIIVAINKIDRPDANPNRVRSELLQYDIAVEAMGGETQDVEVSALKRQGLDALQEAILLQ 549
Query: 351 AEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCGQHVVVGHEWGRIRAIRD 410
AE+++LKA + A+ V+E+ LD+GRGP+ T +V+ GTL G VV G E GR+RA+ D
Sbjct: 550 AELLDLKANPNRSAEGAVIESSLDRGRGPVATVLVQKGTLRQGDIVVAGTEQGRVRAMLD 609
Query: 411 MVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLSSGRKKKFEKDRVRKINE 470
G+ A P+ PVEI GL G+P AG+ +VV++E RAR ++ R++K +
Sbjct: 610 DHGQPLKDAGPSTPVEILGLSGVPGAGEVFVVVENEGRAREIAEFRQRKLREHAAAAGAA 669
Query: 471 ER--TENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSPQLFVNVVHVGVGSVT 528
R + + ++ E+ +++KADVQG+ +A+ ++ L + ++ V V+ GVG +T
Sbjct: 670 ARGTLDQMLARIQAGEQKEVALVIKADVQGSAEAIQATVQKLGNDEVRVRVLLAGVGQIT 729
Query: 529 QSDVDLAQACGACIVGFNVKSPPTSVSQAATQAGIKTRLLGLL 571
+SDV LA+A A IV FNV++ + + A++ G+ R ++
Sbjct: 730 ESDVQLAKASDAIIVAFNVRANAQART-LASRDGVDIRYYSII 771
>sp|A5UF34|IF2_HAEIG Translation initiation factor IF-2 OS=Haemophilus influenzae
(strain PittGG) GN=infB PE=3 SV=1
Length = 844
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/460 (48%), Positives = 303/460 (65%), Gaps = 16/460 (3%)
Query: 105 KPKKTVKSSQDKTVDIFEGMAVVELAKQSGASITTLQDILVNVGEKVDSEFEPLSIDVAE 164
KP + VKS V I E + V ELA + T + +++ +GE V + + + + A+
Sbjct: 255 KPAQVVKSD----VVIGETITVAELANKMAVKATEIIKMMMKMGEMV-TINQVIDQETAQ 309
Query: 165 LVVMELGFNVRRIHSSE-----------GTEILPRPPVVTVMGHVDHGKTSLLDALRQTS 213
LV ELG V + +E E + R PVVT+MGHVDHGKTSLLD +R+
Sbjct: 310 LVAEELGHKVILRNENELEEAVLGDRDVNAEKVTRAPVVTIMGHVDHGKTSLLDYIRKAK 369
Query: 214 LVAKEAGGITQHMGAFVVGMSTGASITFLDTPGHAAFSAMRKRGAAVTDIVVLVVAADDG 273
+ A EAGGITQH+GA+ V M G ITFLDTPGHAAF++MR RGA TDIVVLVVAADDG
Sbjct: 370 VAAGEAGGITQHIGAYHVEMDDGKMITFLDTPGHAAFTSMRARGAKATDIVVLVVAADDG 429
Query: 274 VMPQTLEAIAHANAANVPIVVAINKCDKPAADPERVKNQLGAEGLELEDWGGKVQVVEVS 333
VMPQT+EAI HA AA P+VVA+NK DKP A+P+RV+ +L + E +GG VQ V VS
Sbjct: 430 VMPQTIEAIQHAKAAGAPLVVAVNKIDKPEANPDRVEQELLQHDVISEKFGGDVQFVPVS 489
Query: 334 AVKKTGLDDLEVALLLQAEMMNLKARVDGPAQAYVVEARLDKGRGPLTTAIVKAGTLVCG 393
A K TG+DDL A+LLQ+E++ L A DG A V+E+ LDKGRGP+ T +V++GTL G
Sbjct: 490 AKKGTGVDDLLDAILLQSEVLELTAVKDGMASGVVIESYLDKGRGPVATILVQSGTLRKG 549
Query: 394 QHVVVGHEWGRIRAIRDMVGKSTDKARPAMPVEIEGLKGLPMAGDDIIVVDSEERARMLS 453
V+ G E+GR RA+RD GK D+A P++PVE+ GL G+P AGD+ VV E++AR ++
Sbjct: 550 DIVLCGFEYGRARAMRDENGKEVDEAGPSIPVELLGLSGVPAAGDEATVVRDEKKAREVA 609
Query: 454 SGRKKKFEKDRVRKINEERTENLEPSEDVPKRAEMPVIVKADVQGTVQAVTDALKTLNSP 513
R+ KF + ++ + + + EN+ + AE+ VIVKADVQG+V+A+ AL L++
Sbjct: 610 LYRQGKFREVKLARQQKAKLENMFSNMSEGDVAELNVIVKADVQGSVEAIVQALNELSTN 669
Query: 514 QLFVNVVHVGVGSVTQSDVDLAQACGACIVGFNVKSPPTS 553
++ V VV GVG +T++D LA A A IVGFNV++ T+
Sbjct: 670 EVKVKVVGSGVGGITETDATLATASNAIIVGFNVRADATA 709
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 196,614,842
Number of Sequences: 539616
Number of extensions: 8059470
Number of successful extensions: 40634
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3945
Number of HSP's successfully gapped in prelim test: 812
Number of HSP's that attempted gapping in prelim test: 31105
Number of HSP's gapped (non-prelim): 5895
length of query: 581
length of database: 191,569,459
effective HSP length: 123
effective length of query: 458
effective length of database: 125,196,691
effective search space: 57340084478
effective search space used: 57340084478
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)