BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008008
(581 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPK-QFRTEVELIDY--YKNL 576
ILG+GGFG VY G LADG+ VA+K L QG + QF+TEVE+I ++NL
Sbjct: 45 ILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNL 97
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPK-QFRTEVELIDY--YKNL 576
ILG+GGFG VY G LADG VA+K L +QG + QF+TEVE+I ++NL
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL 89
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQG 559
++G G FG VY G L DG++VA+K + SSQG
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQG 78
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQG 559
++G G FG VY G L DG++VA+K + SSQG
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQG 78
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKMLSA----SSSQGPKQFRTEVELI 570
+G+GGFG VY GY+ + + VA+K L+A ++ + +QF E++++
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVM 84
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKMLSA----SSSQGPKQFRTEVELI 570
+G+GGFG VY GY+ + + VA+K L+A ++ + +QF E++++
Sbjct: 39 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVM 84
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%), Gaps = 5/47 (10%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKMLSA----SSSQGPKQFRTEVELI 570
+G+GGFG VY GY+ + + VA+K L+A ++ + +QF E++++
Sbjct: 33 MGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVM 78
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 506 LSGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+SG+ P + R + L +++LG G FGTVY G ++ DG VAIK+L ++S
Sbjct: 1 MSGAAPNQALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS 59
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 528 LGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+GKGGFG V+ G L D S VAIK L S+G E E+I+ ++ F
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG------ETEMIEKFQEFQREVF 75
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 528 LGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+GKGGFG V+ G L D S VAIK L S+G E E+I+ ++ F
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG------ETEMIEKFQEFQREVF 75
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 7/55 (12%)
Query: 528 LGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+GKGGFG V+ G L D S VAIK L S+G E E+I+ ++ F
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEG------ETEMIEKFQEFQREVF 75
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 527 ILGKGGFGTVYHGY-LADGSEVAIKMLSASSSQG 559
+LGKGGFGTV+ G+ L D +VAIK++ + G
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLG 71
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Query: 529 GKGGFGTVYHGYLADGSEVAIKMLSA----SSSQGPKQFRTEVEL 569
G+GGFG VY GY+ + + VA+K L+A ++ + +QF E+++
Sbjct: 31 GEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKV 74
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHGYLADGSE-----VAIKMLSASSSQG 559
SG+ P R + L +++LG G FGTVY G E VAIK+L+ ++ G
Sbjct: 23 SGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--G 80
Query: 560 PKQFRTEVELID 571
PK VE +D
Sbjct: 81 PK---ANVEFMD 89
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 508 GSVPTSLVARSQNGSLLLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQ 562
GS PT R L+ LGKG FG+V + L D G VA+K L S+ + +
Sbjct: 1 GSDPTQFEERHLK---FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 57
Query: 563 FRTEVELI 570
F E+E++
Sbjct: 58 FEREIEIL 65
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 508 GSVPTSLVARSQNGSLLLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQ 562
GS PT R L+ LGKG FG+V + L D G VA+K L S+ + +
Sbjct: 1 GSDPTQFEERHLK---FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 57
Query: 563 FRTEVELI 570
F E+E++
Sbjct: 58 FEREIEIL 65
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
LR LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 10/52 (19%)
Query: 525 LRILGKGGFGTVYHGYLADGSE-----VAIKMLSASSSQGPKQFRTEVELID 571
+++LG G FGTVY G E VAIK+L+ ++ GPK VE +D
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPK---ANVEFMD 66
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 483 TGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSL 514
+G+IP+FLSQ+ L L+ N LSG++P S+
Sbjct: 114 SGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 483 TGSIPEFLSQLPLLRVLNLDGNKLSGSVPTS 513
+G++P +S LP L + DGN++SG++P S
Sbjct: 138 SGTLPPSISSLPNLVGITFDGNRISGAIPDS 168
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 19 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 64
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Query: 526 RILGKGGFGTVYHGYLADGS----EVAIKMLS 553
R++GKG FG VYHG D + + AIK LS
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLS 58
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 18 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 63
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 22 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 67
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 23 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 68
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 26 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 71
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 62
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 62
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 17 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 62
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 23 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 68
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 25 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 70
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 27 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 72
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 12 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 57
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LG G FG V+ GY ++VA+K L S P F E L+
Sbjct: 13 LVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLM 58
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDYYKN 575
L++ LG G FG V+ G ++VAIK L + P+ F E +++ K+
Sbjct: 13 LIKRLGNGQFGEVWMGTWNGNTKVAIKTLK-PGTMSPESFLEEAQIMKKLKH 63
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 36 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 89
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 43 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 96
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 20 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 73
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 44 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 97
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 18 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 71
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 16 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 21 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 21 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 74
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 528 LGKGGFGTVYHGYLADGSEVAIKML--SASSSQGPKQFRTEVELIDYYKNLSPTYF 581
+G G FGTVY G +VA+KML +A + Q + F+ EV ++ ++++ F
Sbjct: 32 IGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 85
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 25 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 78
Query: 566 E 566
E
Sbjct: 79 E 79
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 64
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 69
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQ 558
LL ++G+G +G VY G L D VA+K+ S ++ Q
Sbjct: 17 LLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ 50
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 27 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 566 E 566
E
Sbjct: 81 E 81
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 25 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 82
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASS 556
L++ LG G FG V+ GY + ++VA+K L +
Sbjct: 17 LVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT 49
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 27 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 566 E 566
E
Sbjct: 81 E 81
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 8/73 (10%)
Query: 503 GNKLSGSVPTSLVARSQNGSLLLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSS 557
G+ PT R L+ LGKG FG+V + L D G VA+K L S+
Sbjct: 27 GSAFEDRDPTQFEERHLK---FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE 83
Query: 558 QGPKQFRTEVELI 570
+ + F E+E++
Sbjct: 84 EHLRDFEREIEIL 96
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 28 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 81
Query: 566 E 566
E
Sbjct: 82 E 82
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 70
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 63
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 68
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 2 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 66
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 71
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 65
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 32 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 85
Query: 566 E 566
E
Sbjct: 86 E 86
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 26 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 79
Query: 566 E 566
E
Sbjct: 80 E 80
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 28 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 81
Query: 566 E 566
E
Sbjct: 82 E 82
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 525 LRILGKGGFGTVYHGYLADGSE-VAIKMLSASSSQGPKQFRTEVELIDYYKNL 576
LR +G G FG VY SE VAIK +S S Q ++++ ++ + + + L
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL 72
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 2 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 30 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 67
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 27 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 566 E 566
E
Sbjct: 81 E 81
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 524 LLRILGKGGFGTVYHGYLADGSEVAIKMLSASS 556
L++ LG G FG V+ GY + ++VA+K L +
Sbjct: 16 LVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT 48
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 1 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 58
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 2 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 46 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 99
Query: 566 E 566
E
Sbjct: 100 E 100
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 4 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 61
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 24 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 77
Query: 566 E 566
E
Sbjct: 78 E 78
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 2 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 1 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 58
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 27 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 566 E 566
E
Sbjct: 81 E 81
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 26 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 79
Query: 566 E 566
E
Sbjct: 80 E 80
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 22 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 75
Query: 566 E 566
E
Sbjct: 76 E 76
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 24 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 61
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 6 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 63
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 2 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 59
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 25 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 78
Query: 566 E 566
E
Sbjct: 79 E 79
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 72
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 7 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 64
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 526 RILGKGGFGTVYHGYLADGSEVAIK 550
+++G G FG V+ L + EVAIK
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIK 70
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
SG P + R + +++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 7 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 64
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 57
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 14 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 51
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 57
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 57
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 45 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 98
Query: 566 E 566
E
Sbjct: 99 E 99
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 57
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 507 SGSVPTSLVARSQNGSLL--LRILGKGGFGTVYHG-YLADGSEVAI-----KMLSASSSQ 558
SG P + R + +++LG G FGTVY G ++ +G +V I ++ A+S +
Sbjct: 34 SGEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPK 93
Query: 559 GPKQFRTE 566
K+ E
Sbjct: 94 ANKEILDE 101
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 19 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 72
Query: 566 E 566
E
Sbjct: 73 E 73
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 525 LRILGKGGFGTVYHGYLADGSE-VAIKMLSASSSQGPKQFRTEVELIDYYKNL 576
LR +G G FG VY SE VAIK +S S Q ++++ ++ + + + L
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL 111
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 57
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 511 PTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGS----EVAIKMLSASSSQGP-KQFRT 565
P+SL+ ++G+G FG VYHG L D A+K L+ + G QF T
Sbjct: 86 PSSLIVHFN------EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLT 139
Query: 566 E 566
E
Sbjct: 140 E 140
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 17 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 54
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Query: 524 LLRILGKGGFGTV---YHGYLAD--GSEVAIKMLSASSSQGPKQFRTEVELI 570
L+ LGKG FG+V + L D G VA+K L S+ + + F E+E++
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEIL 83
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 525 LRILGKGGFGTVYHG-YLADGSE----VAIKMLSASSS 557
+++LG G FGTVY G ++ +G + VAIK L ++S
Sbjct: 23 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS 60
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 524 LLRILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQGPKQFRTEVELID 571
LLR LG+G FG VY G D + VA+K ++ S+S R +E ++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-----LRERIEFLN 69
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 524 LLRILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQGPKQFRTEVELID 571
LLR LG+G FG VY G D + VA+K ++ S+S R +E ++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-----LRERIEFLN 69
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
Query: 508 GSVPTSLVARSQNGSLLLRILGKGGFGTVYHGYL------ADGSEVAIKMLSASSSQGPK 561
G++ T + ++ +L R LG+G FG V+ D VA+K L +S K
Sbjct: 1 GAMDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARK 60
Query: 562 QFRTEVELI 570
F E EL+
Sbjct: 61 DFHREAELL 69
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 524 LLRILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQGPKQFRTEVELID 571
LLR LG+G FG VY G D + VA+K ++ S+S R +E ++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-----LRERIEFLN 69
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 524 LLRILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQGPKQFRTEVELID 571
LLR LG+G FG VY G D + VA+K ++ S+S R +E ++
Sbjct: 22 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-----LRERIEFLN 70
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 524 LLRILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQGPKQFRTEVELID 571
LLR LG+G FG VY G D + VA+K ++ S+S R +E ++
Sbjct: 18 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-----LRERIEFLN 66
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 524 LLRILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQGPKQFRTEVELID 571
LLR LG+G FG VY G D + VA+K ++ S+S R +E ++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-----LRERIEFLN 69
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 524 LLRILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQGPKQFRTEVELID 571
LLR LG+G FG VY G D + VA+K ++ S+S R +E ++
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-----LRERIEFLN 69
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 513 SLVARSQNGSLLLRILGKGGFGTVYHGY-LADGSEVAIKM 551
S+ R N L R +G G FG +Y G +A G EVAIK+
Sbjct: 2 SMELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKL 41
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 11/54 (20%)
Query: 524 LLRILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQGPKQFRTEVELID 571
LLR LG+G FG VY G D + VA+K ++ S+S R +E ++
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS-----LRERIEFLN 68
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 9/85 (10%)
Query: 436 LNCSYN---GYKPPKIIS------LNLTSEGLTGKIXXXXXXXXXXXXXXXXXXXXTGSI 486
L+ SYN GY P +I S LNL ++G I G I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 487 PEFLSQLPLLRVLNLDGNKLSGSVP 511
P+ +S L +L ++L N LSG +P
Sbjct: 694 PQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 483 TGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVA 516
+GSIP+ + L L +L+L NKL G +P ++ A
Sbjct: 666 SGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 699
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 483 TGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSL 514
TG IP+++ +L L +L L N SG++P L
Sbjct: 500 TGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 531
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 9/85 (10%)
Query: 436 LNCSYN---GYKP------PKIISLNLTSEGLTGKIXXXXXXXXXXXXXXXXXXXXTGSI 486
L+ SYN GY P P + LNL ++G I G I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 487 PEFLSQLPLLRVLNLDGNKLSGSVP 511
P+ +S L +L ++L N LSG +P
Sbjct: 697 PQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 483 TGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVA 516
+GSIP+ + L L +L+L NKL G +P ++ A
Sbjct: 669 SGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 483 TGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSL 514
TG IP+++ +L L +L L N SG++P L
Sbjct: 503 TGEIPKWIGRLENLAILKLSNNSFSGNIPAEL 534
>pdb|1J3L|A Chain A, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
pdb|1J3L|B Chain B, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
pdb|1J3L|C Chain C, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
pdb|1J3L|D Chain D, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
pdb|1J3L|E Chain E, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
pdb|1J3L|F Chain F, Structure Of The Rna-Processing Inhibitor Rraa From
Thermus Thermophilis
Length = 164
Score = 29.6 bits (65), Expect = 4.6, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 497 RVLNLDGNKLSGSVPTSLVARSQNGSLLLRILGKGGFGTVYHGYLADGSE-----VAIKM 551
+VL +DG GS+ T+L+ G+L R KG G V HG + D E + +
Sbjct: 58 QVLFVDG---GGSLRTALLG----GNLARRAWEKGWAGVVVHGAVRDTEELREVPIGLLA 110
Query: 552 LSASSSQGPKQFRTEVEL 569
L+A+ + K+ + EV++
Sbjct: 111 LAATPKKSAKEGKGEVDV 128
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 513 SLVARSQNGSLLLRILGKGGFGTVYHGY-LADGSEVAIKM 551
S+ R N L R +G G FG +Y G +A G EVAIK+
Sbjct: 2 SMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL 41
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 18/77 (23%)
Query: 488 EFLSQLPLLRVLN------------LDGNKLS-GSVPTSLVARSQNGSLLLRILGKGGFG 534
E L Q PLL +N L KL+ G L ++ Q G LL G GGFG
Sbjct: 10 EVLFQGPLLSKINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLL----GSGGFG 65
Query: 535 TVYHGY-LADGSEVAIK 550
+VY G ++D VAIK
Sbjct: 66 SVYSGIRVSDNLPVAIK 82
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,690,057
Number of Sequences: 62578
Number of extensions: 687446
Number of successful extensions: 1816
Number of sequences better than 100.0: 128
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 1781
Number of HSP's gapped (non-prelim): 147
length of query: 581
length of database: 14,973,337
effective HSP length: 104
effective length of query: 477
effective length of database: 8,465,225
effective search space: 4037912325
effective search space used: 4037912325
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)