Query 008008
Match_columns 581
No_of_seqs 509 out of 3551
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 18:15:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008008.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008008hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03150 hypothetical protein; 100.0 3.7E-77 8E-82 669.9 41.6 440 60-515 21-511 (623)
2 PF12819 Malectin_like: Carboh 100.0 1.3E-68 2.7E-73 560.5 31.3 323 67-392 1-347 (347)
3 PLN03150 hypothetical protein; 99.9 2.2E-20 4.9E-25 210.6 21.4 153 64-218 193-364 (623)
4 PF11721 Malectin: Di-glucose 99.4 5.9E-13 1.3E-17 126.4 7.9 138 65-211 3-174 (174)
5 PF12819 Malectin_like: Carboh 99.4 3.2E-12 7E-17 134.5 12.1 147 64-216 180-347 (347)
6 PF11721 Malectin: Di-glucose 99.3 2.5E-12 5.4E-17 122.1 3.4 130 231-374 2-152 (174)
7 PLN00113 leucine-rich repeat r 99.2 3.4E-11 7.3E-16 143.7 10.6 131 446-580 523-749 (968)
8 KOG1187 Serine/threonine prote 98.8 9.2E-09 2E-13 108.9 6.7 67 514-581 70-138 (361)
9 PLN00113 leucine-rich repeat r 98.7 3.6E-08 7.7E-13 117.9 7.9 104 401-512 27-136 (968)
10 KOG1026 Nerve growth factor re 98.0 1.4E-06 3E-11 97.7 -0.1 55 527-581 493-556 (774)
11 PF13855 LRR_8: Leucine rich r 98.0 4.5E-06 9.7E-11 64.7 2.5 61 446-506 1-61 (61)
12 KOG0658 Glycogen synthase kina 97.8 1.3E-05 2.9E-10 82.2 3.6 52 526-581 30-84 (364)
13 KOG0595 Serine/threonine-prote 97.8 1.7E-05 3.6E-10 82.5 3.7 54 527-580 17-75 (429)
14 KOG0192 Tyrosine kinase specif 97.8 2.4E-05 5.3E-10 82.8 5.0 55 527-581 48-106 (362)
15 KOG0193 Serine/threonine prote 97.7 3.3E-05 7.1E-10 83.8 4.9 52 527-580 399-454 (678)
16 KOG0197 Tyrosine kinases [Sign 97.7 2.7E-05 5.9E-10 83.4 3.9 54 527-581 213-268 (468)
17 KOG1095 Protein tyrosine kinas 97.7 2.6E-05 5.7E-10 90.6 3.9 56 526-581 698-762 (1025)
18 KOG0600 Cdc2-related protein k 97.7 4.1E-05 8.9E-10 81.5 4.8 55 526-580 123-182 (560)
19 KOG0194 Protein tyrosine kinas 97.6 3.1E-05 6.8E-10 83.8 3.3 55 527-581 164-228 (474)
20 KOG1094 Discoidin domain recep 97.6 5.3E-05 1.1E-09 81.9 4.6 55 527-581 545-602 (807)
21 KOG0591 NIMA (never in mitosis 97.5 2.2E-05 4.7E-10 78.0 0.3 54 527-580 26-84 (375)
22 KOG0659 Cdk activating kinase 97.5 0.00011 2.4E-09 72.6 4.9 54 527-580 9-67 (318)
23 KOG0196 Tyrosine kinase, EPH ( 97.5 6.4E-05 1.4E-09 83.7 3.3 55 527-581 636-697 (996)
24 KOG2052 Activin A type IB rece 97.5 0.00013 2.8E-09 76.8 5.2 70 507-580 197-271 (513)
25 KOG0575 Polo-like serine/threo 97.4 0.00014 3.1E-09 79.1 5.2 55 526-580 24-84 (592)
26 PHA02988 hypothetical protein; 97.4 0.00018 3.8E-09 73.5 5.7 53 527-580 27-84 (283)
27 KOG1025 Epidermal growth facto 97.4 0.00017 3.7E-09 80.8 4.9 55 527-581 703-765 (1177)
28 KOG0593 Predicted protein kina 97.4 0.00016 3.5E-09 72.7 4.2 54 527-580 9-67 (396)
29 KOG0199 ACK and related non-re 97.3 0.0002 4.3E-09 79.0 4.9 66 509-581 106-178 (1039)
30 KOG0662 Cyclin-dependent kinas 97.3 0.00026 5.7E-09 66.1 4.7 54 527-580 9-67 (292)
31 KOG4250 TANK binding protein k 97.2 0.00014 3E-09 80.4 1.9 54 527-580 20-77 (732)
32 PF07714 Pkinase_Tyr: Protein 97.2 0.00027 5.9E-09 71.0 3.9 54 527-580 6-67 (259)
33 KOG0663 Protein kinase PITSLRE 97.2 0.0004 8.8E-09 70.7 4.8 53 527-579 83-140 (419)
34 KOG0597 Serine-threonine prote 97.2 0.00035 7.5E-09 75.5 4.1 54 527-580 9-67 (808)
35 cd06624 STKc_ASK Catalytic dom 97.2 0.00047 1E-08 69.2 5.0 54 527-580 15-71 (268)
36 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 97.2 0.00042 9.1E-09 70.2 4.6 55 526-580 10-71 (284)
37 cd05067 PTKc_Lck_Blk Catalytic 97.1 0.00065 1.4E-08 67.8 5.8 54 526-580 12-67 (260)
38 KOG1035 eIF-2alpha kinase GCN2 97.1 0.0002 4.3E-09 83.4 2.0 56 525-580 484-543 (1351)
39 PF12799 LRR_4: Leucine Rich r 97.1 0.00035 7.6E-09 50.4 2.5 36 471-507 2-37 (44)
40 KOG1989 ARK protein kinase fam 97.1 0.00052 1.1E-08 77.6 4.6 54 527-580 44-101 (738)
41 cd05064 PTKc_EphR_A10 Catalyti 97.1 0.00061 1.3E-08 68.5 4.8 55 526-580 11-72 (266)
42 KOG3653 Transforming growth fa 97.1 0.00025 5.4E-09 75.1 1.9 50 527-580 217-270 (534)
43 cd05096 PTKc_DDR1 Catalytic do 97.0 0.00066 1.4E-08 69.7 4.7 54 527-580 12-85 (304)
44 cd05114 PTKc_Tec_Rlk Catalytic 97.0 0.001 2.2E-08 66.3 5.8 54 526-580 10-65 (256)
45 KOG4257 Focal adhesion tyrosin 97.0 0.00056 1.2E-08 74.7 3.9 55 527-581 396-458 (974)
46 cd05068 PTKc_Frk_like Catalyti 97.0 0.0011 2.3E-08 66.3 5.8 54 526-580 12-67 (261)
47 cd05102 PTKc_VEGFR3 Catalytic 97.0 0.0006 1.3E-08 71.2 3.8 55 526-580 13-77 (338)
48 cd05104 PTKc_Kit Catalytic dom 97.0 0.00092 2E-08 71.3 5.2 54 527-580 42-105 (375)
49 cd05072 PTKc_Lyn Catalytic dom 97.0 0.0011 2.4E-08 66.2 5.4 54 526-580 12-67 (261)
50 cd05105 PTKc_PDGFR_alpha Catal 96.9 0.001 2.2E-08 71.7 5.5 54 527-580 44-107 (400)
51 KOG0615 Serine/threonine prote 96.9 0.00099 2.2E-08 69.6 4.6 55 526-580 178-242 (475)
52 cd05108 PTKc_EGFR Catalytic do 96.9 0.0011 2.4E-08 68.5 5.2 55 526-580 13-75 (316)
53 cd07871 STKc_PCTAIRE3 Catalyti 96.9 0.0016 3.4E-08 66.5 6.0 55 526-580 11-69 (288)
54 cd06646 STKc_MAP4K5 Catalytic 96.9 0.0016 3.4E-08 65.3 5.9 54 527-580 16-72 (267)
55 PLN00034 mitogen-activated pro 96.9 0.0013 2.7E-08 69.4 5.4 54 527-580 81-138 (353)
56 cd07868 STKc_CDK8 Catalytic do 96.9 0.0016 3.5E-08 67.2 6.1 52 527-580 8-64 (317)
57 cd05070 PTKc_Fyn_Yrk Catalytic 96.9 0.0016 3.5E-08 65.0 5.8 53 527-580 13-67 (260)
58 cd05113 PTKc_Btk_Bmx Catalytic 96.9 0.0016 3.4E-08 65.2 5.6 54 526-580 10-65 (256)
59 KOG0617 Ras suppressor protein 96.9 0.00022 4.7E-09 66.3 -0.6 66 447-514 57-123 (264)
60 cd05034 PTKc_Src_like Catalyti 96.8 0.0019 4.1E-08 64.4 6.1 53 527-580 13-67 (261)
61 cd05107 PTKc_PDGFR_beta Cataly 96.8 0.0013 2.9E-08 70.9 5.2 54 527-580 44-107 (401)
62 cd05049 PTKc_Trk Catalytic dom 96.8 0.0012 2.6E-08 66.6 4.6 54 527-580 12-74 (280)
63 PRK09188 serine/threonine prot 96.8 0.0017 3.6E-08 69.0 5.8 52 527-578 25-85 (365)
64 KOG4236 Serine/threonine prote 96.8 0.0012 2.5E-08 70.9 4.4 54 527-580 571-629 (888)
65 KOG0198 MEKK and related serin 96.8 0.0016 3.4E-08 67.5 5.2 55 527-581 24-81 (313)
66 cd05033 PTKc_EphR Catalytic do 96.8 0.0018 3.9E-08 64.9 5.6 54 527-580 11-71 (266)
67 KOG0661 MAPK related serine/th 96.8 0.00059 1.3E-08 72.4 2.0 53 527-580 17-75 (538)
68 cd07859 STKc_TDY_MAPK_plant Ca 96.8 0.0018 3.9E-08 67.4 5.6 55 526-580 6-65 (338)
69 cd05090 PTKc_Ror1 Catalytic do 96.8 0.0015 3.3E-08 66.1 4.9 55 526-580 11-73 (283)
70 cd05071 PTKc_Src Catalytic dom 96.8 0.002 4.3E-08 64.6 5.7 54 526-580 12-67 (262)
71 cd07853 STKc_NLK Catalytic dom 96.8 0.0015 3.3E-08 69.3 5.1 54 527-580 7-65 (372)
72 cd05626 STKc_LATS2 Catalytic d 96.8 0.0013 2.9E-08 70.1 4.5 56 525-580 6-67 (381)
73 cd05612 STKc_PRKX_like Catalyt 96.7 0.0014 3E-08 67.1 4.4 55 526-580 7-67 (291)
74 cd07867 STKc_CDC2L6 Catalytic 96.7 0.0021 4.5E-08 66.2 5.7 52 527-580 8-64 (317)
75 cd05631 STKc_GRK4 Catalytic do 96.7 0.0017 3.7E-08 66.1 5.0 55 526-580 6-66 (285)
76 cd05148 PTKc_Srm_Brk Catalytic 96.7 0.0015 3.1E-08 65.2 4.4 54 527-580 13-68 (261)
77 KOG0580 Serine/threonine prote 96.7 0.0005 1.1E-08 67.1 1.0 54 527-580 29-88 (281)
78 KOG0598 Ribosomal protein S6 k 96.7 0.0011 2.3E-08 68.5 3.4 57 525-581 30-92 (357)
79 PTZ00263 protein kinase A cata 96.7 0.0018 4E-08 67.5 5.1 55 526-580 24-84 (329)
80 cd07869 STKc_PFTAIRE1 Catalyti 96.7 0.0025 5.5E-08 65.4 6.1 55 526-580 11-69 (303)
81 KOG4278 Protein tyrosine kinas 96.7 0.00084 1.8E-08 73.2 2.4 54 527-581 274-330 (1157)
82 cd07872 STKc_PCTAIRE2 Catalyti 96.7 0.0027 5.8E-08 65.4 6.1 55 526-580 12-70 (309)
83 cd05074 PTKc_Tyro3 Catalytic d 96.7 0.0016 3.5E-08 65.3 4.4 54 527-580 6-67 (273)
84 cd06632 STKc_MEKK1_plant Catal 96.7 0.0021 4.4E-08 63.8 5.1 54 527-580 7-68 (258)
85 cd05600 STKc_Sid2p_Dbf2p Catal 96.7 0.0018 3.9E-08 67.6 4.8 55 526-580 7-67 (333)
86 KOG0617 Ras suppressor protein 96.7 0.00047 1E-08 64.1 0.4 69 446-516 79-148 (264)
87 cd05103 PTKc_VEGFR2 Catalytic 96.7 0.0018 3.8E-08 68.1 4.7 54 527-580 14-77 (343)
88 cd06631 STKc_YSK4 Catalytic do 96.7 0.0028 6E-08 63.4 6.0 54 527-580 7-68 (265)
89 cd05038 PTKc_Jak_rpt2 Catalyti 96.7 0.0023 4.9E-08 64.5 5.3 54 527-580 11-72 (284)
90 cd05112 PTKc_Itk Catalytic dom 96.7 0.0028 6.1E-08 62.9 5.9 54 526-580 10-65 (256)
91 cd05043 PTK_Ryk Pseudokinase d 96.7 0.0022 4.7E-08 64.8 5.1 55 526-580 12-74 (280)
92 cd07848 STKc_CDKL5 Catalytic d 96.7 0.0029 6.3E-08 64.1 6.1 55 526-580 7-66 (287)
93 cd05625 STKc_LATS1 Catalytic d 96.7 0.0016 3.4E-08 69.5 4.2 56 525-580 6-67 (382)
94 cd05035 PTKc_Axl_like Catalyti 96.7 0.0018 3.9E-08 64.9 4.4 54 527-580 6-67 (273)
95 cd05039 PTKc_Csk_like Catalyti 96.6 0.0024 5.3E-08 63.4 5.3 52 527-580 13-66 (256)
96 cd05073 PTKc_Hck Catalytic dom 96.6 0.0024 5.1E-08 63.9 5.1 54 526-580 12-67 (260)
97 KOG0444 Cytoskeletal regulator 96.6 0.0017 3.6E-08 71.1 4.1 130 367-514 34-169 (1255)
98 cd05629 STKc_NDR_like_fungal C 96.6 0.0018 4E-08 68.8 4.3 55 526-580 7-67 (377)
99 cd05599 STKc_NDR_like Catalyti 96.6 0.0019 4.1E-08 68.3 4.3 55 526-580 7-67 (364)
100 cd05075 PTKc_Axl Catalytic dom 96.6 0.0021 4.5E-08 64.5 4.3 54 527-580 6-66 (272)
101 cd05091 PTKc_Ror2 Catalytic do 96.6 0.0025 5.5E-08 64.4 4.9 54 527-580 12-74 (283)
102 KOG0577 Serine/threonine prote 96.6 0.0026 5.6E-08 69.3 5.0 56 525-580 31-92 (948)
103 cd07878 STKc_p38beta_MAPK11 Ca 96.6 0.0024 5.1E-08 66.9 4.8 54 527-580 22-80 (343)
104 cd05065 PTKc_EphR_B Catalytic 96.6 0.0022 4.7E-08 64.4 4.3 54 527-580 11-71 (269)
105 cd06619 PKc_MKK5 Catalytic dom 96.5 0.0029 6.3E-08 64.0 4.9 55 526-580 7-65 (279)
106 cd05069 PTKc_Yes Catalytic dom 96.5 0.0037 8.1E-08 62.4 5.6 53 527-580 13-67 (260)
107 cd05046 PTK_CCK4 Pseudokinase 96.5 0.0029 6.4E-08 63.6 4.9 55 526-580 11-74 (275)
108 cd06659 STKc_PAK6 Catalytic do 96.5 0.0033 7.2E-08 64.5 5.3 54 527-580 28-84 (297)
109 cd07876 STKc_JNK2 Catalytic do 96.5 0.0033 7.2E-08 66.3 5.4 55 526-580 27-86 (359)
110 cd07854 STKc_MAPK4_6 Catalytic 96.5 0.0042 9.2E-08 65.1 6.1 55 526-580 11-68 (342)
111 cd05106 PTKc_CSF-1R Catalytic 96.5 0.003 6.6E-08 67.3 5.0 54 527-580 45-108 (374)
112 cd05605 STKc_GRK4_like Catalyt 96.5 0.0034 7.4E-08 63.9 5.1 55 526-580 6-66 (285)
113 cd05056 PTKc_FAK Catalytic dom 96.5 0.0027 5.8E-08 63.8 4.2 54 527-580 13-73 (270)
114 PTZ00036 glycogen synthase kin 96.5 0.0038 8.2E-08 68.2 5.7 51 526-580 72-125 (440)
115 cd07860 STKc_CDK2_3 Catalytic 96.5 0.0049 1.1E-07 62.3 6.1 55 526-580 6-65 (284)
116 KOG0444 Cytoskeletal regulator 96.5 0.00098 2.1E-08 72.8 0.9 69 445-515 77-146 (1255)
117 cd06644 STKc_STK10_LOK Catalyt 96.5 0.0033 7.1E-08 64.1 4.8 54 527-580 19-75 (292)
118 KOG0032 Ca2+/calmodulin-depend 96.5 0.0033 7.1E-08 67.2 4.9 54 527-580 42-102 (382)
119 smart00219 TyrKc Tyrosine kina 96.5 0.0039 8.4E-08 61.7 5.2 54 527-580 6-67 (258)
120 cd06656 STKc_PAK3 Catalytic do 96.4 0.0045 9.8E-08 63.4 5.7 55 526-580 25-82 (297)
121 cd07862 STKc_CDK6 Catalytic do 96.4 0.0052 1.1E-07 62.3 6.2 55 526-580 7-70 (290)
122 cd05573 STKc_ROCK_NDR_like Cat 96.4 0.0035 7.6E-08 65.6 5.0 55 526-580 7-67 (350)
123 PTZ00426 cAMP-dependent protei 96.4 0.0035 7.5E-08 66.0 4.9 55 526-580 36-97 (340)
124 cd05632 STKc_GRK5 Catalytic do 96.4 0.0036 7.8E-08 63.7 4.8 55 526-580 6-66 (285)
125 cd06645 STKc_MAP4K3 Catalytic 96.4 0.0044 9.5E-08 62.0 5.4 54 527-580 16-72 (267)
126 cd07873 STKc_PCTAIRE1 Catalyti 96.4 0.0058 1.2E-07 62.6 6.3 55 526-580 12-70 (301)
127 cd06657 STKc_PAK4 Catalytic do 96.4 0.004 8.8E-08 63.7 5.1 54 527-580 27-83 (292)
128 cd06643 STKc_SLK Catalytic dom 96.4 0.0034 7.4E-08 63.5 4.6 54 527-580 12-68 (282)
129 cd08228 STKc_Nek6 Catalytic do 96.4 0.0057 1.2E-07 61.1 6.1 54 527-580 9-68 (267)
130 cd05598 STKc_LATS Catalytic do 96.4 0.0039 8.4E-08 66.3 5.1 56 525-580 6-67 (376)
131 cd05059 PTKc_Tec_like Catalyti 96.4 0.0046 9.9E-08 61.6 5.3 53 527-580 11-65 (256)
132 cd07835 STKc_CDK1_like Catalyt 96.4 0.0061 1.3E-07 61.5 6.2 54 527-580 6-64 (283)
133 cd07840 STKc_CDK9_like Catalyt 96.4 0.0057 1.2E-07 61.6 5.9 55 526-580 5-64 (287)
134 cd07832 STKc_CCRK Catalytic do 96.4 0.0057 1.2E-07 61.7 5.9 55 526-580 6-65 (286)
135 cd06611 STKc_SLK_like Catalyti 96.4 0.0034 7.3E-08 63.4 4.2 54 527-580 12-68 (280)
136 cd06642 STKc_STK25-YSK1 Cataly 96.4 0.0041 8.8E-08 62.8 4.8 54 527-580 11-68 (277)
137 cd05093 PTKc_TrkB Catalytic do 96.3 0.0034 7.4E-08 63.9 4.2 54 527-580 12-73 (288)
138 cd07846 STKc_CDKL2_3 Catalytic 96.3 0.0049 1.1E-07 62.3 5.3 55 526-580 7-66 (286)
139 cd05092 PTKc_TrkA Catalytic do 96.3 0.0032 7E-08 63.7 4.0 54 527-580 12-73 (280)
140 cd07842 STKc_CDK8_like Catalyt 96.3 0.0063 1.4E-07 62.4 6.2 55 526-580 6-68 (316)
141 cd06649 PKc_MEK2 Catalytic dom 96.3 0.0041 9E-08 64.9 4.9 55 526-580 11-69 (331)
142 cd06641 STKc_MST3 Catalytic do 96.3 0.0054 1.2E-07 61.9 5.6 54 527-580 11-68 (277)
143 cd06650 PKc_MEK1 Catalytic dom 96.3 0.0043 9.2E-08 64.9 4.8 55 526-580 11-69 (333)
144 cd07844 STKc_PCTAIRE_like Cata 96.3 0.0058 1.3E-07 62.0 5.7 55 526-580 11-69 (291)
145 cd06654 STKc_PAK1 Catalytic do 96.3 0.0061 1.3E-07 62.5 5.8 55 526-580 26-83 (296)
146 cd07849 STKc_ERK1_2_like Catal 96.3 0.0058 1.3E-07 63.8 5.7 55 526-580 11-69 (336)
147 cd06655 STKc_PAK2 Catalytic do 96.3 0.0066 1.4E-07 62.2 6.1 55 526-580 25-82 (296)
148 PF12799 LRR_4: Leucine Rich r 96.3 0.0035 7.6E-08 45.2 2.8 36 447-483 2-37 (44)
149 cd06647 STKc_PAK_I Catalytic d 96.3 0.0061 1.3E-07 62.3 5.7 55 526-580 25-82 (293)
150 cd05045 PTKc_RET Catalytic dom 96.3 0.0045 9.7E-08 63.0 4.7 54 527-580 7-69 (290)
151 cd07874 STKc_JNK3 Catalytic do 96.3 0.0051 1.1E-07 64.7 5.2 55 526-580 23-82 (355)
152 cd05578 STKc_Yank1 Catalytic d 96.3 0.0053 1.2E-07 61.1 5.1 55 526-580 6-66 (258)
153 cd07836 STKc_Pho85 Catalytic d 96.3 0.0073 1.6E-07 60.9 6.1 55 526-580 6-64 (284)
154 cd06652 STKc_MEKK2 Catalytic d 96.3 0.0051 1.1E-07 61.6 4.9 55 526-580 8-70 (265)
155 cd07841 STKc_CDK7 Catalytic do 96.3 0.0067 1.5E-07 61.8 5.9 54 527-580 7-68 (298)
156 cd08229 STKc_Nek7 Catalytic do 96.3 0.0052 1.1E-07 61.4 4.9 54 527-580 9-68 (267)
157 cd06622 PKc_MAPKK_PBS2_like Ca 96.3 0.004 8.7E-08 63.1 4.1 54 527-580 8-65 (286)
158 cd06620 PKc_MAPKK_Byr1_like Ca 96.3 0.0064 1.4E-07 61.7 5.6 54 527-580 12-69 (284)
159 cd05066 PTKc_EphR_A Catalytic 96.3 0.0056 1.2E-07 61.4 5.1 55 526-580 10-71 (267)
160 cd07847 STKc_CDKL1_4 Catalytic 96.2 0.007 1.5E-07 61.1 5.9 55 526-580 7-66 (286)
161 cd06617 PKc_MKK3_6 Catalytic d 96.2 0.0065 1.4E-07 61.3 5.6 55 526-580 7-66 (283)
162 cd05080 PTKc_Tyk2_rpt2 Catalyt 96.2 0.005 1.1E-07 62.3 4.8 55 526-580 10-72 (283)
163 cd05079 PTKc_Jak1_rpt2 Catalyt 96.2 0.0053 1.1E-07 62.3 4.9 55 526-580 10-72 (284)
164 cd08224 STKc_Nek6_Nek7 Catalyt 96.2 0.0076 1.6E-07 60.1 6.0 54 527-580 9-68 (267)
165 PHA03212 serine/threonine kina 96.2 0.0052 1.1E-07 66.0 5.1 50 525-580 97-149 (391)
166 cd05597 STKc_DMPK_like Catalyt 96.2 0.0051 1.1E-07 64.2 4.9 55 526-580 7-67 (331)
167 cd07877 STKc_p38alpha_MAPK14 C 96.2 0.0057 1.2E-07 64.3 5.2 55 526-580 23-82 (345)
168 cd07879 STKc_p38delta_MAPK13 C 96.2 0.0077 1.7E-07 63.2 6.1 55 526-580 21-80 (342)
169 cd06626 STKc_MEKK4 Catalytic d 96.2 0.0071 1.5E-07 60.2 5.6 54 527-580 7-65 (264)
170 cd05052 PTKc_Abl Catalytic dom 96.2 0.0061 1.3E-07 61.0 5.1 53 527-580 13-68 (263)
171 cd06613 STKc_MAP4K3_like Catal 96.2 0.0075 1.6E-07 59.9 5.7 55 526-580 9-66 (262)
172 cd07875 STKc_JNK1 Catalytic do 96.2 0.0074 1.6E-07 63.8 6.0 55 526-580 30-89 (364)
173 cd06606 STKc_MAPKKK Catalytic 96.2 0.0071 1.5E-07 59.5 5.4 55 526-580 6-65 (260)
174 cd07837 STKc_CdkB_plant Cataly 96.2 0.0082 1.8E-07 61.0 6.0 55 526-580 7-67 (295)
175 cd07864 STKc_CDK12 Catalytic d 96.2 0.0087 1.9E-07 61.0 6.2 54 527-580 14-72 (302)
176 KOG0594 Protein kinase PCTAIRE 96.2 0.0062 1.4E-07 62.6 4.9 54 527-580 18-77 (323)
177 cd05050 PTKc_Musk Catalytic do 96.2 0.0043 9.3E-08 63.0 3.8 54 527-580 12-74 (288)
178 cd06629 STKc_MAPKKK_Bck1_like 96.2 0.0057 1.2E-07 61.4 4.7 54 527-580 8-74 (272)
179 cd06637 STKc_TNIK Catalytic do 96.2 0.0083 1.8E-07 60.1 5.9 53 527-580 13-69 (272)
180 KOG0585 Ca2+/calmodulin-depend 96.2 0.0069 1.5E-07 64.6 5.3 54 527-580 104-174 (576)
181 cd06658 STKc_PAK5 Catalytic do 96.2 0.005 1.1E-07 63.0 4.3 54 527-580 29-85 (292)
182 cd06630 STKc_MEKK1 Catalytic d 96.1 0.0058 1.3E-07 61.0 4.6 54 527-580 7-69 (268)
183 cd07863 STKc_CDK4 Catalytic do 96.1 0.0087 1.9E-07 60.6 5.9 55 526-580 6-68 (288)
184 KOG0472 Leucine-rich repeat pr 96.1 0.0027 5.9E-08 66.3 2.1 60 445-507 251-310 (565)
185 PRK13184 pknD serine/threonine 96.1 0.0082 1.8E-07 70.5 6.3 55 526-580 8-68 (932)
186 cd07880 STKc_p38gamma_MAPK12 C 96.1 0.0077 1.7E-07 63.2 5.7 55 526-580 21-80 (343)
187 cd05601 STKc_CRIK Catalytic do 96.1 0.0057 1.2E-07 63.6 4.5 55 526-580 7-67 (330)
188 cd05596 STKc_ROCK Catalytic do 96.1 0.007 1.5E-07 64.4 5.2 55 526-580 49-109 (370)
189 KOG0582 Ste20-like serine/thre 96.1 0.0069 1.5E-07 64.1 4.9 55 526-580 32-90 (516)
190 cd06651 STKc_MEKK3 Catalytic d 96.1 0.0068 1.5E-07 60.7 4.8 54 527-580 9-70 (266)
191 cd05054 PTKc_VEGFR Catalytic d 96.1 0.0053 1.2E-07 64.4 4.1 54 527-580 14-77 (337)
192 cd08529 STKc_FA2-like Catalyti 96.1 0.0082 1.8E-07 59.4 5.3 54 527-580 7-65 (256)
193 cd07861 STKc_CDK1_euk Catalyti 96.1 0.011 2.3E-07 59.8 6.2 55 526-580 6-65 (285)
194 cd06628 STKc_MAPKKK_Byr2_like 96.1 0.01 2.3E-07 59.2 6.0 54 527-580 7-72 (267)
195 cd06607 STKc_TAO Catalytic dom 96.1 0.01 2.2E-07 61.0 6.1 55 526-580 21-81 (307)
196 cd06648 STKc_PAK_II Catalytic 96.1 0.0084 1.8E-07 61.0 5.3 55 526-580 25-82 (285)
197 cd06612 STKc_MST1_2 Catalytic 96.1 0.0076 1.7E-07 59.6 4.9 52 527-580 10-64 (256)
198 KOG4237 Extracellular matrix p 96.0 0.0045 9.8E-08 64.6 3.2 78 436-514 51-135 (498)
199 cd06623 PKc_MAPKK_plant_like C 96.0 0.0092 2E-07 59.3 5.4 55 526-580 7-65 (264)
200 cd06609 STKc_MST3_like Catalyt 96.0 0.0087 1.9E-07 60.2 5.3 54 527-580 8-65 (274)
201 cd07858 STKc_TEY_MAPK_plant Ca 96.0 0.0096 2.1E-07 62.2 5.7 55 526-580 11-70 (337)
202 PLN00009 cyclin-dependent kina 96.0 0.0095 2.1E-07 60.6 5.6 55 526-580 8-67 (294)
203 cd05094 PTKc_TrkC Catalytic do 96.0 0.0063 1.4E-07 62.0 4.2 54 527-580 12-73 (291)
204 cd07870 STKc_PFTAIRE2 Catalyti 96.0 0.011 2.4E-07 60.1 6.0 55 526-580 11-69 (291)
205 cd08225 STKc_Nek5 Catalytic do 96.0 0.0092 2E-07 59.1 5.3 55 526-580 6-65 (257)
206 PTZ00024 cyclin-dependent prot 96.0 0.0086 1.9E-07 62.4 5.3 54 527-580 16-86 (335)
207 cd05110 PTKc_HER4 Catalytic do 96.0 0.0073 1.6E-07 62.0 4.7 55 526-580 13-75 (303)
208 cd06615 PKc_MEK Catalytic doma 96.0 0.0077 1.7E-07 62.1 4.9 55 526-580 7-65 (308)
209 cd06621 PKc_MAPKK_Pek1_like Ca 96.0 0.0099 2.1E-07 60.4 5.6 56 525-580 6-65 (287)
210 cd05057 PTKc_EGFR_like Catalyt 96.0 0.0067 1.4E-07 61.3 4.3 54 527-580 14-75 (279)
211 PLN03224 probable serine/threo 96.0 0.0055 1.2E-07 67.9 3.9 40 526-565 151-207 (507)
212 cd05063 PTKc_EphR_A2 Catalytic 96.0 0.0077 1.7E-07 60.3 4.7 54 527-580 12-72 (268)
213 cd06616 PKc_MKK4 Catalytic dom 96.0 0.0086 1.9E-07 60.7 5.1 54 527-580 11-69 (288)
214 cd05111 PTK_HER3 Pseudokinase 96.0 0.008 1.7E-07 60.9 4.8 54 527-580 14-75 (279)
215 cd06640 STKc_MST4 Catalytic do 96.0 0.0076 1.6E-07 60.8 4.6 54 527-580 11-68 (277)
216 cd05122 PKc_STE Catalytic doma 96.0 0.011 2.4E-07 57.8 5.6 54 527-580 7-63 (253)
217 cd05089 PTKc_Tie1 Catalytic do 96.0 0.007 1.5E-07 61.9 4.4 54 527-580 9-69 (297)
218 cd05048 PTKc_Ror Catalytic Dom 96.0 0.008 1.7E-07 60.7 4.6 54 527-580 12-74 (283)
219 cd05621 STKc_ROCK2 Catalytic d 96.0 0.0089 1.9E-07 63.7 5.2 55 526-580 49-109 (370)
220 cd05036 PTKc_ALK_LTK Catalytic 96.0 0.0073 1.6E-07 61.0 4.3 55 526-580 12-75 (277)
221 cd05109 PTKc_HER2 Catalytic do 96.0 0.0095 2.1E-07 60.1 5.2 55 526-580 13-75 (279)
222 cd05097 PTKc_DDR_like Catalyti 96.0 0.0059 1.3E-07 62.3 3.7 54 527-580 12-83 (295)
223 cd07850 STKc_JNK Catalytic dom 95.9 0.011 2.3E-07 62.3 5.7 55 526-580 22-81 (353)
224 cd05628 STKc_NDR1 Catalytic do 95.9 0.0063 1.4E-07 64.4 3.9 55 526-580 7-67 (363)
225 cd05062 PTKc_IGF-1R Catalytic 95.9 0.0073 1.6E-07 60.9 4.2 54 527-580 13-75 (277)
226 PTZ00283 serine/threonine prot 95.9 0.0078 1.7E-07 66.8 4.8 54 526-579 38-96 (496)
227 cd06653 STKc_MEKK3_like_1 Cata 95.9 0.01 2.2E-07 59.4 5.2 54 527-580 9-70 (264)
228 PRK15387 E3 ubiquitin-protein 95.9 0.0037 8E-08 72.2 2.2 66 446-516 402-467 (788)
229 KOG4279 Serine/threonine prote 95.9 0.0051 1.1E-07 68.2 3.0 55 527-581 582-639 (1226)
230 cd06610 STKc_OSR1_SPAK Catalyt 95.9 0.011 2.4E-07 58.7 5.5 55 526-580 7-65 (267)
231 cd08218 STKc_Nek1 Catalytic do 95.9 0.0094 2E-07 59.1 4.8 55 526-580 6-65 (256)
232 cd07839 STKc_CDK5 Catalytic do 95.9 0.011 2.3E-07 59.8 5.3 55 526-580 6-65 (284)
233 cd05630 STKc_GRK6 Catalytic do 95.9 0.0095 2.1E-07 60.6 4.9 55 526-580 6-66 (285)
234 KOG0578 p21-activated serine/t 95.9 0.006 1.3E-07 66.2 3.5 54 527-580 280-336 (550)
235 cd06635 STKc_TAO1 Catalytic do 95.9 0.01 2.3E-07 61.3 5.3 54 527-580 32-91 (317)
236 KOG0201 Serine/threonine prote 95.9 0.0074 1.6E-07 63.7 4.0 55 526-580 19-77 (467)
237 cd07845 STKc_CDK10 Catalytic d 95.9 0.012 2.7E-07 60.4 5.7 55 526-580 13-72 (309)
238 cd05061 PTKc_InsR Catalytic do 95.9 0.01 2.2E-07 60.3 5.1 55 526-580 12-75 (288)
239 KOG4579 Leucine-rich repeat (L 95.9 0.0025 5.4E-08 57.4 0.4 66 446-514 53-119 (177)
240 cd05032 PTKc_InsR_like Catalyt 95.9 0.0099 2.1E-07 59.7 4.8 55 526-580 12-75 (277)
241 cd07866 STKc_BUR1 Catalytic do 95.9 0.015 3.3E-07 59.4 6.2 55 526-580 14-73 (311)
242 cd08217 STKc_Nek2 Catalytic do 95.9 0.011 2.4E-07 58.6 5.0 55 526-580 6-65 (265)
243 cd05574 STKc_phototropin_like 95.9 0.014 3E-07 60.2 5.9 55 526-580 7-67 (316)
244 cd05051 PTKc_DDR Catalytic dom 95.8 0.0091 2E-07 60.7 4.5 54 527-580 12-85 (296)
245 cd07865 STKc_CDK9 Catalytic do 95.8 0.016 3.5E-07 59.1 6.3 55 526-580 18-77 (310)
246 cd05624 STKc_MRCK_beta Catalyt 95.8 0.0087 1.9E-07 62.5 4.4 55 526-580 7-67 (331)
247 cd07843 STKc_CDC2L1 Catalytic 95.8 0.012 2.6E-07 59.8 5.3 54 527-580 12-70 (293)
248 cd05082 PTKc_Csk Catalytic dom 95.8 0.013 2.8E-07 58.3 5.4 52 526-580 12-65 (256)
249 cd07833 STKc_CDKL Catalytic do 95.8 0.012 2.6E-07 59.4 5.3 55 526-580 7-66 (288)
250 cd06638 STKc_myosinIIIA Cataly 95.8 0.013 2.8E-07 59.3 5.4 54 526-580 24-81 (286)
251 cd07856 STKc_Sty1_Hog1 Catalyt 95.8 0.014 3.1E-07 60.8 6.0 55 526-580 16-75 (328)
252 cd06614 STKc_PAK Catalytic dom 95.8 0.013 2.7E-07 59.5 5.4 53 527-580 26-81 (286)
253 cd05055 PTKc_PDGFR Catalytic d 95.8 0.01 2.2E-07 61.1 4.6 54 527-580 42-105 (302)
254 cd06605 PKc_MAPKK Catalytic do 95.8 0.011 2.3E-07 59.0 4.7 54 527-580 8-65 (265)
255 cd08528 STKc_Nek10 Catalytic d 95.8 0.011 2.4E-07 59.2 4.8 54 527-580 7-75 (269)
256 cd08221 STKc_Nek9 Catalytic do 95.8 0.014 3.1E-07 57.8 5.6 55 526-580 6-65 (256)
257 cd05589 STKc_PKN Catalytic dom 95.8 0.011 2.4E-07 61.4 5.0 55 526-580 5-68 (324)
258 cd05580 STKc_PKA Catalytic dom 95.8 0.011 2.5E-07 60.0 4.9 55 526-580 7-67 (290)
259 PTZ00267 NIMA-related protein 95.8 0.0094 2E-07 65.8 4.5 55 526-580 73-131 (478)
260 cd05083 PTKc_Chk Catalytic dom 95.8 0.012 2.5E-07 58.5 4.8 51 527-580 13-65 (254)
261 cd05095 PTKc_DDR2 Catalytic do 95.8 0.009 1.9E-07 61.0 4.1 55 526-580 11-85 (296)
262 cd05098 PTKc_FGFR1 Catalytic d 95.8 0.011 2.5E-07 60.7 4.8 55 526-580 24-90 (307)
263 PHA03211 serine/threonine kina 95.8 0.012 2.5E-07 64.8 5.1 49 526-580 175-226 (461)
264 cd05088 PTKc_Tie2 Catalytic do 95.8 0.012 2.6E-07 60.5 4.9 54 527-580 14-74 (303)
265 KOG0605 NDR and related serine 95.7 0.0092 2E-07 64.5 4.0 56 526-581 147-208 (550)
266 cd07855 STKc_ERK5 Catalytic do 95.7 0.016 3.5E-07 60.4 6.0 55 526-580 11-70 (334)
267 cd06625 STKc_MEKK3_like Cataly 95.7 0.013 2.9E-07 58.2 5.1 54 527-580 9-70 (263)
268 cd05101 PTKc_FGFR2 Catalytic d 95.7 0.012 2.5E-07 60.4 4.6 55 526-580 21-87 (304)
269 cd07834 STKc_MAPK Catalytic do 95.7 0.015 3.2E-07 60.4 5.4 54 527-580 7-65 (330)
270 cd08220 STKc_Nek8 Catalytic do 95.7 0.018 4E-07 56.9 5.7 55 526-580 6-65 (256)
271 cd05627 STKc_NDR2 Catalytic do 95.6 0.012 2.6E-07 62.2 4.6 55 526-580 7-67 (360)
272 KOG2345 Serine/threonine prote 95.6 0.0067 1.4E-07 59.8 2.3 55 526-580 27-84 (302)
273 KOG0583 Serine/threonine prote 95.6 0.014 3E-07 62.2 5.0 55 526-580 23-86 (370)
274 cd05613 STKc_MSK1_N N-terminal 95.6 0.016 3.5E-07 58.8 5.3 55 526-580 6-71 (290)
275 smart00221 STYKc Protein kinas 95.6 0.02 4.4E-07 55.0 5.7 54 527-580 6-63 (225)
276 cd06627 STKc_Cdc7_like Catalyt 95.6 0.019 4E-07 56.6 5.5 54 527-580 7-65 (254)
277 PF00069 Pkinase: Protein kina 95.6 0.01 2.2E-07 58.7 3.7 55 526-580 5-64 (260)
278 cd07852 STKc_MAPK15 Catalytic 95.6 0.016 3.4E-07 60.6 5.0 54 527-580 14-73 (337)
279 cd05622 STKc_ROCK1 Catalytic d 95.6 0.015 3.2E-07 62.0 4.9 55 526-580 49-109 (371)
280 cd05610 STKc_MASTL Catalytic d 95.6 0.017 3.8E-07 66.5 5.8 55 526-580 10-70 (669)
281 cd05623 STKc_MRCK_alpha Cataly 95.6 0.013 2.8E-07 61.2 4.3 55 526-580 7-67 (332)
282 cd06618 PKc_MKK7 Catalytic dom 95.6 0.019 4.1E-07 58.6 5.6 55 526-580 21-80 (296)
283 cd05614 STKc_MSK2_N N-terminal 95.5 0.016 3.4E-07 60.3 5.0 55 526-580 6-71 (332)
284 KOG0660 Mitogen-activated prot 95.5 0.0099 2.1E-07 61.4 3.2 55 526-580 28-87 (359)
285 cd06633 STKc_TAO3 Catalytic do 95.5 0.018 4E-07 59.4 5.3 54 527-580 28-87 (313)
286 KOG0200 Fibroblast/platelet-de 95.5 0.014 3E-07 66.6 4.7 55 527-581 303-369 (609)
287 KOG0586 Serine/threonine prote 95.5 0.017 3.7E-07 63.3 5.2 54 527-580 63-121 (596)
288 cd05053 PTKc_FGFR Catalytic do 95.5 0.015 3.2E-07 59.2 4.4 55 526-580 18-82 (293)
289 cd07831 STKc_MOK Catalytic dom 95.5 0.023 5E-07 57.1 5.7 55 526-580 5-64 (282)
290 cd07857 STKc_MPK1 Catalytic do 95.4 0.023 5E-07 59.2 5.7 55 526-580 6-68 (332)
291 cd08215 STKc_Nek Catalytic dom 95.4 0.024 5.2E-07 55.8 5.6 55 526-580 6-65 (258)
292 KOG0472 Leucine-rich repeat pr 95.4 0.0091 2E-07 62.5 2.6 65 447-514 229-294 (565)
293 KOG0668 Casein kinase II, alph 95.4 0.0098 2.1E-07 57.9 2.6 51 527-580 45-99 (338)
294 PHA03207 serine/threonine kina 95.4 0.019 4.2E-07 61.5 5.2 50 526-580 98-152 (392)
295 cd07829 STKc_CDK_like Catalyti 95.4 0.02 4.4E-07 57.5 5.0 54 527-580 6-64 (282)
296 cd08219 STKc_Nek3 Catalytic do 95.4 0.023 5.1E-07 56.3 5.4 55 526-580 6-64 (255)
297 cd05609 STKc_MAST Catalytic do 95.4 0.019 4.1E-07 58.9 4.8 55 526-580 7-67 (305)
298 cd06917 STKc_NAK1_like Catalyt 95.3 0.024 5.3E-07 56.9 5.4 54 527-580 8-68 (277)
299 KOG0611 Predicted serine/threo 95.3 0.011 2.3E-07 61.9 2.7 54 527-580 60-119 (668)
300 cd05615 STKc_cPKC_alpha Cataly 95.3 0.021 4.5E-07 59.4 4.9 55 526-580 6-67 (323)
301 KOG0581 Mitogen-activated prot 95.3 0.021 4.5E-07 59.3 4.7 56 526-581 85-144 (364)
302 PF08263 LRRNT_2: Leucine rich 95.3 0.0091 2E-07 42.7 1.4 33 402-439 2-43 (43)
303 cd06636 STKc_MAP4K4_6 Catalyti 95.3 0.026 5.6E-07 56.9 5.3 53 527-580 23-79 (282)
304 cd05100 PTKc_FGFR3 Catalytic d 95.3 0.02 4.4E-07 59.7 4.6 54 527-580 19-84 (334)
305 cd07838 STKc_CDK4_6_like Catal 95.2 0.029 6.3E-07 56.5 5.6 55 526-580 5-67 (287)
306 cd06608 STKc_myosinIII_like Ca 95.2 0.03 6.6E-07 55.8 5.6 54 526-580 12-69 (275)
307 cd05118 STKc_CMGC Catalytic do 95.2 0.031 6.7E-07 56.2 5.6 54 527-580 6-64 (283)
308 cd08223 STKc_Nek4 Catalytic do 95.2 0.03 6.5E-07 55.4 5.5 55 526-580 6-65 (257)
309 cd05587 STKc_cPKC Catalytic do 95.2 0.024 5.3E-07 58.8 4.9 54 526-579 6-66 (324)
310 cd05581 STKc_PDK1 Catalytic do 95.2 0.023 5E-07 56.9 4.6 54 527-580 8-68 (280)
311 PRK10345 hypothetical protein; 95.1 0.027 5.9E-07 55.1 4.8 52 527-580 9-67 (210)
312 PTZ00266 NIMA-related protein 95.1 0.029 6.4E-07 66.4 5.9 55 526-580 19-78 (1021)
313 cd06634 STKc_TAO2 Catalytic do 95.1 0.028 6E-07 57.9 5.1 54 527-580 22-81 (308)
314 cd05583 STKc_MSK_N N-terminal 95.1 0.023 5.1E-07 57.6 4.5 55 526-580 6-71 (288)
315 PHA03209 serine/threonine kina 95.1 0.034 7.3E-07 58.8 5.8 49 526-580 72-123 (357)
316 cd05099 PTKc_FGFR4 Catalytic d 95.1 0.023 5.1E-07 58.6 4.5 55 526-580 18-84 (314)
317 cd07851 STKc_p38 Catalytic dom 95.1 0.025 5.5E-07 59.3 4.7 55 526-580 21-80 (343)
318 cd05616 STKc_cPKC_beta Catalyt 95.0 0.029 6.3E-07 58.2 4.9 55 526-580 6-67 (323)
319 cd06639 STKc_myosinIIIB Cataly 95.0 0.04 8.7E-07 55.9 5.7 54 526-580 28-85 (291)
320 cd08227 PK_STRAD_alpha Pseudok 95.0 0.032 7E-07 57.9 5.1 52 529-580 9-65 (327)
321 KOG1006 Mitogen-activated prot 94.9 0.011 2.4E-07 58.8 1.5 55 527-581 71-130 (361)
322 KOG0579 Ste20-like serine/thre 94.9 0.0042 9.1E-08 68.1 -1.7 54 527-580 39-95 (1187)
323 cd08226 PK_STRAD_beta Pseudoki 94.8 0.044 9.6E-07 56.9 5.5 53 528-580 8-65 (328)
324 cd07830 STKc_MAK_like Catalyti 94.7 0.043 9.3E-07 55.3 5.2 54 527-580 6-64 (283)
325 KOG0694 Serine/threonine prote 94.6 0.06 1.3E-06 60.0 6.2 56 525-580 373-435 (694)
326 cd08530 STKc_CNK2-like Catalyt 94.6 0.046 9.9E-07 53.9 4.9 54 527-580 7-65 (256)
327 KOG0584 Serine/threonine prote 94.5 0.011 2.5E-07 64.9 0.4 54 527-580 47-107 (632)
328 cd08216 PK_STRAD Pseudokinase 94.3 0.05 1.1E-06 55.9 4.6 52 528-580 10-65 (314)
329 KOG4579 Leucine-rich repeat (L 94.2 0.01 2.2E-07 53.5 -0.6 68 446-516 77-144 (177)
330 KOG4721 Serine/threonine prote 94.1 0.018 4E-07 62.6 0.9 47 527-581 131-179 (904)
331 PF14580 LRR_9: Leucine-rich r 94.1 0.025 5.5E-07 53.6 1.7 57 447-506 43-100 (175)
332 KOG0666 Cyclin C-dependent kin 94.0 0.025 5.4E-07 57.5 1.6 53 527-579 31-92 (438)
333 PHA03210 serine/threonine kina 93.9 0.024 5.2E-07 63.0 1.2 54 526-580 154-229 (501)
334 PF13855 LRR_8: Leucine rich r 93.8 0.016 3.4E-07 44.6 -0.2 44 470-514 1-44 (61)
335 cd08222 STKc_Nek11 Catalytic d 93.6 0.081 1.7E-06 52.6 4.5 54 527-580 7-68 (260)
336 KOG4194 Membrane glycoprotein 93.6 0.026 5.6E-07 61.8 0.9 62 446-507 269-330 (873)
337 KOG0607 MAP kinase-interacting 93.6 0.031 6.7E-07 57.1 1.3 54 527-580 85-142 (463)
338 KOG0033 Ca2+/calmodulin-depend 93.3 0.0095 2.1E-07 58.6 -2.8 54 527-580 18-76 (355)
339 KOG0596 Dual specificity; seri 93.2 0.035 7.5E-07 60.5 1.1 54 527-580 368-426 (677)
340 PTZ00284 protein kinase; Provi 93.2 0.11 2.4E-06 57.0 5.1 46 526-572 135-181 (467)
341 KOG0618 Serine/threonine phosp 93.1 0.05 1.1E-06 62.6 2.2 58 448-508 409-466 (1081)
342 PF00560 LRR_1: Leucine Rich R 93.1 0.027 5.9E-07 34.1 0.1 19 472-491 2-20 (22)
343 PRK15370 E3 ubiquitin-protein 93.0 0.11 2.4E-06 60.4 4.7 62 446-514 346-407 (754)
344 KOG1259 Nischarin, modulator o 93.0 0.035 7.5E-07 56.2 0.6 59 445-506 306-364 (490)
345 KOG1027 Serine/threonine prote 92.9 0.041 8.8E-07 62.5 1.0 50 527-580 516-569 (903)
346 KOG4717 Serine/threonine prote 92.9 0.081 1.8E-06 57.2 3.2 54 527-580 25-83 (864)
347 KOG0618 Serine/threonine phosp 92.9 0.018 3.8E-07 66.1 -1.8 63 446-511 383-446 (1081)
348 KOG0574 STE20-like serine/thre 92.6 0.06 1.3E-06 54.4 1.7 53 527-581 40-95 (502)
349 KOG4645 MAPKKK (MAP kinase kin 92.6 0.071 1.5E-06 63.4 2.5 55 527-581 1242-1301(1509)
350 PF14580 LRR_9: Leucine-rich r 92.6 0.11 2.4E-06 49.2 3.5 62 445-507 63-126 (175)
351 cd00116 LRR_RI Leucine-rich re 92.5 0.063 1.4E-06 55.3 1.9 63 447-509 109-180 (319)
352 KOG0589 Serine/threonine prote 92.3 0.12 2.6E-06 55.5 3.7 56 525-580 9-69 (426)
353 PRK10359 lipopolysaccharide co 92.3 0.21 4.7E-06 49.5 5.2 53 526-579 37-100 (232)
354 cd00116 LRR_RI Leucine-rich re 92.2 0.074 1.6E-06 54.7 1.9 70 446-515 165-242 (319)
355 PRK15387 E3 ubiquitin-protein 92.0 0.16 3.6E-06 58.9 4.5 64 446-518 382-445 (788)
356 PLN03210 Resistant to P. syrin 91.9 0.16 3.5E-06 62.3 4.7 64 447-511 658-721 (1153)
357 PRK15370 E3 ubiquitin-protein 91.9 0.18 3.8E-06 58.7 4.7 61 447-514 221-281 (754)
358 KOG0592 3-phosphoinositide-dep 91.6 0.084 1.8E-06 57.4 1.5 55 527-581 80-141 (604)
359 PLN03210 Resistant to P. syrin 91.6 0.2 4.3E-06 61.5 4.9 58 446-504 778-835 (1153)
360 KOG1151 Tousled-like protein k 91.5 0.062 1.3E-06 57.0 0.4 54 527-580 470-533 (775)
361 COG4886 Leucine-rich repeat (L 91.3 0.094 2E-06 56.2 1.6 64 447-513 141-204 (394)
362 KOG0667 Dual-specificity tyros 91.1 0.29 6.2E-06 54.4 5.1 47 525-572 191-238 (586)
363 KOG4658 Apoptotic ATPase [Sign 91.1 0.15 3.2E-06 60.4 3.0 60 446-506 571-630 (889)
364 KOG0587 Traf2- and Nck-interac 91.0 0.31 6.6E-06 56.0 5.2 55 526-581 25-83 (953)
365 KOG0669 Cyclin T-dependent kin 90.8 0.031 6.7E-07 55.3 -2.4 54 527-580 24-82 (376)
366 KOG1152 Signal transduction se 90.8 0.19 4.1E-06 55.2 3.2 56 525-580 566-635 (772)
367 cd05144 RIO2_C RIO kinase fami 90.5 0.37 8E-06 46.3 4.8 28 527-554 22-49 (198)
368 KOG4194 Membrane glycoprotein 90.4 0.22 4.7E-06 54.9 3.3 62 445-507 77-138 (873)
369 PHA02882 putative serine/threo 90.4 0.46 1E-05 48.4 5.6 26 527-552 19-48 (294)
370 smart00090 RIO RIO-like kinase 90.2 0.38 8.2E-06 48.0 4.7 29 527-555 35-65 (237)
371 TIGR01982 UbiB 2-polyprenylphe 89.8 0.37 8.1E-06 52.6 4.6 42 527-571 124-165 (437)
372 KOG0616 cAMP-dependent protein 89.6 0.18 3.8E-06 51.2 1.7 56 526-581 50-111 (355)
373 KOG0664 Nemo-like MAPK-related 89.6 0.13 2.9E-06 51.4 0.8 54 527-580 60-118 (449)
374 PF03109 ABC1: ABC1 family; I 89.1 0.18 3.8E-06 44.7 1.1 41 527-570 18-58 (119)
375 KOG3593 Predicted receptor-lik 88.4 0.91 2E-05 45.7 5.6 147 228-392 58-228 (355)
376 KOG0532 Leucine-rich repeat (L 88.3 0.19 4.1E-06 55.1 0.9 66 448-517 191-256 (722)
377 KOG1259 Nischarin, modulator o 88.0 0.25 5.4E-06 50.2 1.5 59 445-506 328-386 (490)
378 KOG1859 Leucine-rich repeat pr 87.8 0.09 1.9E-06 59.1 -1.9 61 445-508 186-268 (1096)
379 KOG0610 Putative serine/threon 87.7 0.67 1.4E-05 49.1 4.5 54 527-580 84-143 (459)
380 KOG0532 Leucine-rich repeat (L 87.7 0.08 1.7E-06 58.0 -2.3 70 446-519 166-235 (722)
381 KOG0576 Mitogen-activated prot 87.7 0.12 2.7E-06 57.5 -0.9 56 525-580 20-78 (829)
382 PHA03390 pk1 serine/threonine- 87.3 0.77 1.7E-05 46.0 4.6 50 528-580 24-75 (267)
383 PRK09605 bifunctional UGMP fam 86.7 0.92 2E-05 50.9 5.3 51 527-578 340-400 (535)
384 COG4886 Leucine-rich repeat (L 86.4 0.47 1E-05 50.7 2.7 65 446-513 116-181 (394)
385 KOG4237 Extracellular matrix p 85.9 0.17 3.8E-06 53.1 -0.9 63 445-507 273-335 (498)
386 cd05120 APH_ChoK_like Aminogly 84.6 1.6 3.5E-05 38.5 4.9 43 527-572 5-47 (155)
387 PF00560 LRR_1: Leucine Rich R 84.0 0.45 9.7E-06 28.7 0.6 22 447-469 1-22 (22)
388 KOG0588 Serine/threonine prote 83.7 0.88 1.9E-05 51.0 3.2 54 527-580 19-78 (786)
389 KOG1163 Casein kinase (serine/ 83.1 2.4 5.1E-05 42.2 5.5 31 525-555 20-51 (341)
390 PF13504 LRR_7: Leucine rich r 81.9 0.83 1.8E-05 25.8 1.2 13 471-483 2-14 (17)
391 KOG1167 Serine/threonine prote 81.6 0.82 1.8E-05 48.4 1.9 52 527-580 43-101 (418)
392 KOG0986 G protein-coupled rece 81.2 0.41 8.9E-06 51.3 -0.5 56 525-580 190-251 (591)
393 PLN03225 Serine/threonine-prot 80.7 2 4.4E-05 48.6 4.8 29 526-554 138-171 (566)
394 PRK04750 ubiB putative ubiquin 80.6 2.4 5.1E-05 47.5 5.2 29 527-555 126-155 (537)
395 KOG4658 Apoptotic ATPase [Sign 79.7 1.3 2.8E-05 52.5 2.9 71 446-517 545-617 (889)
396 KOG0984 Mitogen-activated prot 79.2 1.5 3.2E-05 42.6 2.6 55 527-581 53-112 (282)
397 KOG2739 Leucine-rich acidic nu 79.0 0.9 2E-05 45.4 1.1 37 446-482 65-103 (260)
398 KOG1859 Leucine-rich repeat pr 78.1 0.3 6.5E-06 55.1 -2.7 57 448-507 166-222 (1096)
399 KOG2982 Uncharacterized conser 76.1 1.3 2.8E-05 45.2 1.3 73 432-506 85-158 (418)
400 PRK12274 serine/threonine prot 75.1 4.1 9E-05 40.0 4.5 53 527-580 9-68 (218)
401 cd05076 PTK_Tyk2_rpt1 Pseudoki 74.0 1.9 4E-05 43.4 1.9 36 545-580 45-82 (274)
402 smart00369 LRR_TYP Leucine-ric 73.9 2.9 6.2E-05 26.0 2.0 18 470-488 2-19 (26)
403 smart00370 LRR Leucine-rich re 73.9 2.9 6.2E-05 26.0 2.0 18 470-488 2-19 (26)
404 cd05077 PTK_Jak1_rpt1 Pseudoki 73.7 2.5 5.5E-05 42.1 2.8 37 544-580 32-70 (262)
405 cd05584 STKc_p70S6K Catalytic 73.7 2.9 6.3E-05 43.2 3.3 39 542-580 22-66 (323)
406 cd05040 PTKc_Ack_like Catalyti 73.2 3 6.4E-05 41.1 3.1 38 543-580 22-62 (257)
407 KOG1024 Receptor-like protein 73.2 0.89 1.9E-05 48.0 -0.7 54 527-580 291-353 (563)
408 KOG2739 Leucine-rich acidic nu 73.0 2.3 5.1E-05 42.5 2.2 41 467-507 62-104 (260)
409 KOG0531 Protein phosphatase 1, 71.5 2.7 5.8E-05 45.5 2.5 58 446-507 118-175 (414)
410 KOG2982 Uncharacterized conser 71.4 1.3 2.8E-05 45.2 0.0 35 447-481 122-157 (418)
411 COG0661 AarF Predicted unusual 71.3 3.8 8.2E-05 45.7 3.6 29 527-555 132-160 (517)
412 cd05582 STKc_RSK_N N-terminal 70.4 3.5 7.6E-05 42.4 3.0 39 542-580 22-64 (318)
413 KOG0983 Mitogen-activated prot 70.1 5.6 0.00012 40.3 4.1 54 527-580 99-157 (391)
414 KOG1164 Casein kinase (serine/ 69.8 5.6 0.00012 41.4 4.4 47 526-572 24-72 (322)
415 KOG0690 Serine/threonine prote 65.5 3.1 6.8E-05 42.9 1.3 56 526-581 174-235 (516)
416 cd05058 PTKc_Met_Ron Catalytic 65.5 4.6 9.9E-05 39.8 2.6 38 543-580 22-62 (262)
417 cd05060 PTKc_Syk_like Catalyti 63.4 7.5 0.00016 38.2 3.7 36 545-580 24-62 (257)
418 KOG1290 Serine/threonine prote 62.5 10 0.00022 41.4 4.5 46 525-572 83-130 (590)
419 cd05037 PTK_Jak_rpt1 Pseudokin 61.4 6.5 0.00014 38.5 2.8 35 545-580 31-67 (259)
420 KOG1644 U2-associated snRNP A' 60.8 5.7 0.00012 38.5 2.1 56 448-506 44-100 (233)
421 KOG0599 Phosphorylase kinase g 60.2 6.3 0.00014 39.9 2.3 54 527-580 24-89 (411)
422 cd00192 PTKc Catalytic domain 59.8 10 0.00022 37.0 3.8 38 543-580 22-62 (262)
423 cd05044 PTKc_c-ros Catalytic d 58.1 5.3 0.00011 39.5 1.5 37 544-580 26-65 (269)
424 KOG3207 Beta-tubulin folding c 56.2 5.2 0.00011 43.0 1.1 60 446-505 172-233 (505)
425 KOG3207 Beta-tubulin folding c 55.9 5 0.00011 43.1 0.9 60 446-506 246-313 (505)
426 KOG0612 Rho-associated, coiled 54.5 3.3 7.2E-05 49.3 -0.8 56 526-581 81-142 (1317)
427 KOG0195 Integrin-linked kinase 54.1 2.7 5.8E-05 42.4 -1.4 53 527-580 197-253 (448)
428 cd05078 PTK_Jak2_Jak3_rpt1 Pse 53.5 4.3 9.3E-05 40.1 -0.0 37 544-580 27-65 (258)
429 PF13516 LRR_6: Leucine Rich r 53.5 2.7 5.8E-05 25.6 -1.0 14 470-483 2-15 (24)
430 KOG2123 Uncharacterized conser 52.9 3.6 7.9E-05 41.7 -0.7 66 445-513 40-107 (388)
431 KOG0531 Protein phosphatase 1, 50.0 8.2 0.00018 41.7 1.4 58 447-507 141-199 (414)
432 COG5238 RNA1 Ran GTPase-activa 49.5 12 0.00026 38.0 2.3 41 466-506 88-132 (388)
433 cd05151 ChoK Choline Kinase (C 48.8 21 0.00046 32.5 3.9 49 527-577 5-55 (170)
434 COG2112 Predicted Ser/Thr prot 48.6 29 0.00063 33.2 4.6 43 527-572 29-71 (201)
435 KOG0473 Leucine-rich repeat pr 48.3 1.1 2.3E-05 44.2 -5.0 45 462-507 80-124 (326)
436 KOG1033 eIF-2alpha kinase PEK/ 47.9 3.8 8.3E-05 44.8 -1.5 55 526-580 55-113 (516)
437 PRK01723 3-deoxy-D-manno-octul 47.3 31 0.00066 34.3 5.0 49 527-576 38-102 (239)
438 KOG1345 Serine/threonine kinas 47.3 17 0.00036 37.0 2.9 51 527-578 31-85 (378)
439 KOG0608 Warts/lats-like serine 44.9 7.8 0.00017 43.6 0.3 57 525-581 634-696 (1034)
440 KOG1165 Casein kinase (serine/ 44.6 15 0.00033 38.4 2.2 26 527-552 35-61 (449)
441 smart00364 LRR_BAC Leucine-ric 43.0 17 0.00036 23.1 1.4 17 471-488 3-19 (26)
442 KOG0604 MAP kinase-activated p 41.4 8 0.00017 39.7 -0.3 49 527-580 69-121 (400)
443 KOG0670 U4/U6-associated splic 41.4 25 0.00054 38.9 3.4 45 527-572 439-484 (752)
444 KOG1644 U2-associated snRNP A' 40.8 28 0.00061 33.9 3.3 60 446-507 64-126 (233)
445 KOG1166 Mitotic checkpoint ser 38.8 29 0.00063 41.6 3.7 29 527-555 705-733 (974)
446 smart00368 LRR_RI Leucine rich 38.7 25 0.00054 22.4 1.8 12 471-482 3-14 (28)
447 smart00365 LRR_SD22 Leucine-ri 37.7 27 0.00059 22.1 1.8 15 469-483 1-15 (26)
448 KOG0696 Serine/threonine prote 37.2 14 0.0003 39.6 0.6 31 525-555 354-385 (683)
449 KOG1235 Predicted unusual prot 37.0 32 0.0007 38.5 3.5 30 527-556 168-197 (538)
450 KOG2120 SCF ubiquitin ligase, 34.0 3.3 7.2E-05 42.4 -4.3 62 446-507 185-248 (419)
451 KOG3593 Predicted receptor-lik 33.2 35 0.00075 34.8 2.7 92 64-165 61-157 (355)
452 KOG0473 Leucine-rich repeat pr 32.7 4.9 0.00011 39.8 -3.2 65 446-513 42-106 (326)
453 KOG1909 Ran GTPase-activating 32.2 18 0.00039 37.9 0.6 38 469-506 91-132 (382)
454 COG5238 RNA1 Ran GTPase-activa 31.2 47 0.001 33.9 3.2 61 446-507 92-170 (388)
455 KOG1909 Ran GTPase-activating 29.3 31 0.00068 36.2 1.7 68 446-514 30-112 (382)
456 KOG3665 ZYG-1-like serine/thre 28.8 36 0.00078 39.6 2.3 15 490-504 216-230 (699)
457 KOG0603 Ribosomal protein S6 k 27.9 25 0.00053 39.6 0.7 50 527-580 329-382 (612)
458 COG0515 SPS1 Serine/threonine 27.8 1E+02 0.0022 30.1 5.1 53 527-580 7-64 (384)
459 PRK15386 type III secretion pr 27.1 64 0.0014 35.0 3.6 64 445-517 71-137 (426)
460 KOG2120 SCF ubiquitin ligase, 26.9 11 0.00023 38.9 -2.1 60 448-507 212-273 (419)
461 KOG1240 Protein kinase contain 26.2 60 0.0013 39.4 3.4 53 527-580 30-87 (1431)
462 KOG3741 Poly(A) ribonuclease s 25.5 75 0.0016 35.4 3.8 46 535-580 291-339 (655)
463 PRK15386 type III secretion pr 24.2 78 0.0017 34.3 3.7 45 445-502 93-140 (426)
464 PF14531 Kinase-like: Kinase-l 23.6 1.1E+02 0.0023 31.6 4.4 45 527-571 19-67 (288)
465 KOG3763 mRNA export factor TAP 22.5 51 0.0011 36.7 1.9 63 445-509 217-285 (585)
466 PF06716 DUF1201: Protein of u 22.3 53 0.0012 23.7 1.3 23 6-28 3-25 (54)
467 KOG0695 Serine/threonine prote 22.1 57 0.0012 34.1 2.0 56 525-580 255-317 (593)
468 KOG3665 ZYG-1-like serine/thre 22.0 45 0.00097 38.8 1.4 50 465-514 215-270 (699)
469 cd05087 PTKc_Aatyk1_Aatyk3 Cat 22.0 75 0.0016 31.3 2.9 22 559-580 38-61 (269)
470 cd05042 PTKc_Aatyk Catalytic d 21.4 88 0.0019 30.7 3.3 21 560-580 39-61 (269)
471 KOG0614 cGMP-dependent protein 20.5 20 0.00044 39.5 -1.6 54 527-580 427-486 (732)
472 cd05086 PTKc_Aatyk2 Catalytic 20.4 91 0.002 30.7 3.1 23 558-580 37-61 (268)
No 1
>PLN03150 hypothetical protein; Provisional
Probab=100.00 E-value=3.7e-77 Score=669.94 Aligned_cols=440 Identities=29% Similarity=0.483 Sum_probs=334.8
Q ss_pred CCCCcEEEecCCCCCCcccCCCCceeecCCcccccCCCccccccccccccccccceeeeeeC--CCCceeEEecCCCCCc
Q 008008 60 DIGGDISIDCGVPAGFMYLDEKTQLSYKSDEEFIRTGVNKNISSKFMSANLQNTYATVRSFP--EGNRNCYSLRPPEGKA 137 (581)
Q Consensus 60 ~~~gf~~IdCG~~~~~~~~D~~~~~~w~~D~~~~~~g~~~~i~~~~~~~~~~~~y~t~R~f~--~~~~~~Y~~~v~~~~~ 137 (581)
.++++|+||||++++.. +|. ++|+|++|..|.. |........ ....++|+|+|+|| +|+++||+||+.+++
T Consensus 21 ~~~~~~~I~CGs~~~~~-~d~-~~~~w~~D~~~~~-~~~~~~~~~---~~~~~~~~t~R~F~~~~g~~~cY~~~~~~~g- 93 (623)
T PLN03150 21 PEPFTMRISCGARVNVR-TAP-TNTLWYKDFAYTG-GIPANATRP---SFIAPPLKTLRYFPLSDGPENCYNINRVPKG- 93 (623)
T ss_pred CCCccEEEeCCCCCCcc-cCC-CCCEEcCCccccc-CccccccCc---ccccchhhccccCCcccccccceEeeecCCC-
Confidence 45789999999975422 454 7999999977643 222211111 12357899999999 577899999998888
Q ss_pred ccEEEEEEeecCCCCCCCCCceEEEEEcceeeEEEEe--cCCCccEEEEEEEEccCCcEEEEEeeCCCCCceeeeeeeee
Q 008008 138 KTYLTRASFMYGDYDDEDKLPEFDLYIGVNRWDSIKF--DNASHVVIKEIIHSALMDEINVCLLNTGKGTPFISALELRH 215 (581)
Q Consensus 138 ~~ylVRl~F~~~~yd~~~~~~~F~v~i~~~~~~~v~~--~~~~~~~~~E~i~~~~~~~l~v~l~~~~~~~pfIn~iEi~~ 215 (581)
+||||+||+|++||+.+..|.|||+++++.|.+|.. +..+..++||+++.++++.+.|||+|++.++||||+||||+
T Consensus 94 -~ylVRl~F~~~~y~~~~~~~~Fdv~~~~~~~~tv~~~~~~~~~~v~~E~i~~~~~~~l~vcf~~~~~~~pFIs~iEv~~ 172 (623)
T PLN03150 94 -HYSVRVFFGLVAEPNFDSEPLFDVSVEGTQISSLKSGWSSHDEQVFAEALVFLTDGSASICFHSTGHGDPAILSIEILQ 172 (623)
T ss_pred -cEEEEEEeecCCcCCCCCCCceEEEECcEEEEEEecCcccCCCcEEEEEEEEecCCcEEEEEecCCCCCCceeEEEEEE
Confidence 999999999999999888899999999999999964 33456799999999999999999999999999999999999
Q ss_pred cCccccccc-----ccceeeEEeeecCCCCC-ccccCCCCCC--CCccCCCCCC---CCCeeeecceeeeccCCCCCCch
Q 008008 216 FHNATYRTQ-----SGALVLYRRLDVGSTTT-QIIRFKDDHY--DRIWVPYPGF---PGSASINTSFIIDSLVDSQYRLP 284 (581)
Q Consensus 216 l~~~~y~~~-----~~~l~~~~Rin~G~~~~-~~ir~~~D~~--dR~W~~d~~~---~~~~~~st~~~i~~~~~~~~~~P 284 (581)
+|+++|... ..+|++++|+||||.+. ..+||++|+| ||+|.+|. . ..+..+++...|.++..+++.+|
T Consensus 173 l~~~~y~~~~~~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~-~~~~~~~~~~st~~~I~~~~~~~~~~P 251 (623)
T PLN03150 173 VDDKAYNFGPSWGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQ-TFGSGSDQAISTENVIKKASNAPNFYP 251 (623)
T ss_pred cCcccccccccccCceEEEEEEEEEecCcccccccCCCCCcccCccccCcCc-ccCCCcccccccccccccccCCCccCh
Confidence 999999643 23699999999999753 4589999999 99999997 3 23566777777776556788999
Q ss_pred HHHHHhcccCCCCCcceEEEEecCCCCccEEEEEEeeeccc-cCCCCeEEEEEEECCEEecccccc-----c---ceeee
Q 008008 285 SAVMKTAVKPMNVNDSLDFDFEIGDPTLQFYVYMHFAELES-RQGNQYREFSIELNGNLWEKSVVP-----E---YLQSK 355 (581)
Q Consensus 285 ~~Vy~TA~~~~~~~~~~~~t~~~~~~~~~y~vrLhF~ei~~-~~~~~~R~F~V~ing~~~~~~~~p-----~---~~~~~ 355 (581)
+.||||||++.+...+++|.|+ +++++.|+|||||||++. ....++|+|+|+|||+.+.+++++ . .++.+
T Consensus 252 ~~VyqTA~~~~~~~~~lty~~~-v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ing~~~~~~~di~~~~g~~~~~~~~~ 330 (623)
T PLN03150 252 ESLYQSALVSTDTQPDLSYTMD-VDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVDIVKMSGERYTALVLN 330 (623)
T ss_pred HHHhhhhccccCCCCceEEEee-cCCCCCEEEEEEEEeccCccCCCceEEEEEEECCEEeecccChhhhcCCcccceEEE
Confidence 9999999999875434444444 578899999999999984 445456999999999988765432 1 22233
Q ss_pred eEEeeecCCCCeEEEEEeecCCCCcChHHHHHHhhhhhccCCCCCCcchhhhhhhhhhhccCC--CCCCCCCCCCCcccc
Q 008008 356 TISSTQPARGSKLNFSLCKTSNSTLPPILNAIEIYILTDTLQEPTDQDDVNAIMDIKLSYDLG--KGWQGDPCSPMYYSW 433 (581)
Q Consensus 356 ~v~~~~~~~~~~~~isl~~t~~s~lp~~ln~le~~~l~~~~~~~t~~~d~~aL~~~k~~~~~~--~~W~g~pC~~~~~~W 433 (581)
+.+. +.++.++|+|+|+..+ +|+|||+|+|++.+. ...+.+.|+.+|+.+|..+... .+|.++||.|..+.|
T Consensus 331 ~~v~---~~~g~l~isl~p~~~s--~pilNaiEI~~~~~~-~~~t~~~~~~aL~~~k~~~~~~~~~~W~g~~C~p~~~~w 404 (623)
T PLN03150 331 KTVA---VSGRTLTIVLQPKKGT--HAIINAIEVFEIITA-ESKTLLEEVSALQTLKSSLGLPLRFGWNGDPCVPQQHPW 404 (623)
T ss_pred eEEe---ecCCeEEEEEeeCCCC--cceeeeeeeeecccc-ccccCchHHHHHHHHHHhcCCcccCCCCCCCCCCccccc
Confidence 3333 2347899999997655 599999999999885 5678889999999999887643 389999999888899
Q ss_pred cCccCCCCCCC-------------------------CCceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccc
Q 008008 434 DGLNCSYNGYK-------------------------PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPE 488 (581)
Q Consensus 434 ~Gv~C~~~~~~-------------------------~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~ 488 (581)
.||.|...... ..+++.|+|++|.|.|.+|..++.+++|+.|+|++|+|+|.+|.
T Consensus 405 ~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~ 484 (623)
T PLN03150 405 SGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPE 484 (623)
T ss_pred ccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCch
Confidence 99999632110 13455555555656566665666666666666666666666666
Q ss_pred cccCCCccccccccCccCCCCCchHHH
Q 008008 489 FLSQLPLLRVLNLDGNKLSGSVPTSLV 515 (581)
Q Consensus 489 ~l~~l~~L~~L~ls~N~l~G~iP~~l~ 515 (581)
.++++++|+.|+|++|+|+|.+|..+.
T Consensus 485 ~l~~L~~L~~L~Ls~N~l~g~iP~~l~ 511 (623)
T PLN03150 485 SLGQLTSLRILNLNGNSLSGRVPAALG 511 (623)
T ss_pred HHhcCCCCCEEECcCCcccccCChHHh
Confidence 666666666666666666666665553
No 2
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []. This entry represents a malectin-like domain found in a number of plant receptor kinases.
Probab=100.00 E-value=1.3e-68 Score=560.47 Aligned_cols=323 Identities=43% Similarity=0.734 Sum_probs=270.6
Q ss_pred EecCCCCCCc-ccCCCCceeecCCcccccCCCcccccccc--ccccccccceeeeeeCCCCceeEEecCCCCCcccEEEE
Q 008008 67 IDCGVPAGFM-YLDEKTQLSYKSDEEFIRTGVNKNISSKF--MSANLQNTYATVRSFPEGNRNCYSLRPPEGKAKTYLTR 143 (581)
Q Consensus 67 IdCG~~~~~~-~~D~~~~~~w~~D~~~~~~g~~~~i~~~~--~~~~~~~~y~t~R~f~~~~~~~Y~~~v~~~~~~~ylVR 143 (581)
||||++.+.+ |+|+.+||+|++|.+|+++|.+..++... ..+...++|+|||+||+|.|+||+|++.++++++||||
T Consensus 1 IdCG~~~~~s~y~D~~tg~~~~~D~~~~~~g~~~~i~~~~~~~~~~~~~~y~taR~F~~g~r~cY~l~~~~~~~~~yliR 80 (347)
T PF12819_consen 1 IDCGSSSNSSSYVDDSTGRTWVSDDDFIDTGKSGNISSQPDSSSSDSSPPYQTARIFPEGSRNCYTLPVTPPGGGKYLIR 80 (347)
T ss_pred CcCCCCCCCcccccCCCCcEEeCCCCcccCCCccccccccCCcCCccccccceEEEcCCCCccEEEeeccCCCCceEEEE
Confidence 7999998777 99988999999999999999988883221 12345789999999999989999999984333499999
Q ss_pred EEeecCCCCCCC-----CCceEEEEEcceeeEEEEecCC-CccEEEEEEEEcc-CCcEEEEEeeCCCCC-ceeeeeeeee
Q 008008 144 ASFMYGDYDDED-----KLPEFDLYIGVNRWDSIKFDNA-SHVVIKEIIHSAL-MDEINVCLLNTGKGT-PFISALELRH 215 (581)
Q Consensus 144 l~F~~~~yd~~~-----~~~~F~v~i~~~~~~~v~~~~~-~~~~~~E~i~~~~-~~~l~v~l~~~~~~~-pfIn~iEi~~ 215 (581)
|||+||+||+.+ .++.|||++|.+.|.+|+.+.. ..++++||++.+. ++.|+|||+|++.+. |||||||||+
T Consensus 81 l~F~~gnyd~~~fs~~~~~~~FdL~~~~n~~~tV~~~~~~~~~~~~E~ii~v~~~~~l~vclv~~~~g~~pFIsaiEl~~ 160 (347)
T PF12819_consen 81 LHFYYGNYDGLNFSVSSSPPTFDLLLGFNFWSTVNLSNSPSSPVVKEFIINVTWSDTLSVCLVPTGSGTFPFISAIELRP 160 (347)
T ss_pred EEeccccccccccccccCCcceEEEECCceeEEEEecCCCcceEEEEEEEEEcCCCcEEEEEEeCCCCCCCceeEEEEEE
Confidence 999999999774 2478999999999999998762 2579999999888 799999999999776 9999999999
Q ss_pred cCcccccc----cccceeeEEeeecCCCCCccccCCCCCCCCccCCCCCCCCCeeeecceeee-ccCCCCCCchHHHHHh
Q 008008 216 FHNATYRT----QSGALVLYRRLDVGSTTTQIIRFKDDHYDRIWVPYPGFPGSASINTSFIID-SLVDSQYRLPSAVMKT 290 (581)
Q Consensus 216 l~~~~y~~----~~~~l~~~~Rin~G~~~~~~ir~~~D~~dR~W~~d~~~~~~~~~st~~~i~-~~~~~~~~~P~~Vy~T 290 (581)
||+++|+. .+.+|++++|+|||+.... |||++|+|||+|.++.....|..+++...++ ....+.+.||.+||||
T Consensus 161 lp~~ly~~~~~~~s~~L~~~~R~n~G~~~~~-iryp~D~~dR~W~~~~~~~~~~~ist~~~i~~~~~~~~~~~P~~V~~T 239 (347)
T PF12819_consen 161 LPDSLYPDTDANSSQALETVYRLNVGGSSSF-IRYPDDTYDRIWQPYSSSPGWSNISTTSNININSSNNPYDAPSAVYQT 239 (347)
T ss_pred CCccceeccccCCCceeEEEEeecCCCcccc-cCCCCCcceeeccccccCccccccccceeeecccCCccCcChHHHHHh
Confidence 99999942 2347999999999997433 9999999999999874246688888877776 4456899999999999
Q ss_pred cccCCCCCcceEEEEecCCCCccEEEEEEeeeccccC-CCCeEEEEEEECCEEecccccccceeee-------eEEeeec
Q 008008 291 AVKPMNVNDSLDFDFEIGDPTLQFYVYMHFAELESRQ-GNQYREFSIELNGNLWEKSVVPEYLQSK-------TISSTQP 362 (581)
Q Consensus 291 A~~~~~~~~~~~~t~~~~~~~~~y~vrLhF~ei~~~~-~~~~R~F~V~ing~~~~~~~~p~~~~~~-------~v~~~~~ 362 (581)
|+++.+.+.+++++|.+++++..|+||||||||+... .+++|+|+|||||+.+.++++|.++..+ +++..
T Consensus 240 A~~~~~~s~~~nltw~~~~~~~~y~v~lHFaEi~~~~~~~~~R~F~IyiN~~~~~~~~~~~~~~~~~~~~~~d~~~~~-- 317 (347)
T PF12819_consen 240 ARTPSNSSDPLNLTWSFVDPGFSYYVRLHFAEIQSLSPNNNQREFDIYINGQTAYSDVSPPYLGADTVPYYSDYVVNV-- 317 (347)
T ss_pred hhcccccccceEEEeccCCCCccEEEEEEEeecccccCCCCeEEEEEEECCeEccCccCcccccCcceEeecceEEEe--
Confidence 9999987777999999988999999999999999854 3435999999999998767776554443 33331
Q ss_pred CCCCeEEEEEeecCCCCcChHHHHHHhhhh
Q 008008 363 ARGSKLNFSLCKTSNSTLPPILNAIEIYIL 392 (581)
Q Consensus 363 ~~~~~~~isl~~t~~s~lp~~ln~le~~~l 392 (581)
..++.++|+|+|+++|++||+|||+|+|++
T Consensus 318 ~~~~~~~isL~~t~~S~lppiLNalEIy~v 347 (347)
T PF12819_consen 318 PDSGFLNISLGPTPDSTLPPILNALEIYKV 347 (347)
T ss_pred cCCCEEEEEEEeCCCCCcCceeEeeeeEeC
Confidence 133579999999999999999999999974
No 3
>PLN03150 hypothetical protein; Provisional
Probab=99.85 E-value=2.2e-20 Score=210.57 Aligned_cols=153 Identities=11% Similarity=0.110 Sum_probs=106.3
Q ss_pred cEEEecCCCCCC---cccCCC--CceeecCCcccccCCC-----ccccccccccc--cccccceeeeeeCCC-CceeEEe
Q 008008 64 DISIDCGVPAGF---MYLDEK--TQLSYKSDEEFIRTGV-----NKNISSKFMSA--NLQNTYATVRSFPEG-NRNCYSL 130 (581)
Q Consensus 64 f~~IdCG~~~~~---~~~D~~--~~~~w~~D~~~~~~g~-----~~~i~~~~~~~--~~~~~y~t~R~f~~~-~~~~Y~~ 130 (581)
.+|||||++... .|.|+. .+|.|.+|..|+.... ...|......+ .|..+|+|||.+.+. ...+|+|
T Consensus 193 ~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~~~~~~~st~~~I~~~~~~~~~~P~~VyqTA~~~~~~~~~lty~~ 272 (623)
T PLN03150 193 AKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSGSDQAISTENVIKKASNAPNFYPESLYQSALVSTDTQPDLSYTM 272 (623)
T ss_pred EEEEEecCcccccccCCCCCcccCccccCcCcccCCCcccccccccccccccCCCccChHHHhhhhccccCCCCceEEEe
Confidence 469999986432 343332 3799999988763311 11121110011 245799999999842 3569999
Q ss_pred cCCCCCcccEEEEEEeecCCCCC-CCCCceEEEEEcceeeE-EEEe---cC-CCccEEEEEEEEccCCcEEEEEeeCCCC
Q 008008 131 RPPEGKAKTYLTRASFMYGDYDD-EDKLPEFDLYIGVNRWD-SIKF---DN-ASHVVIKEIIHSALMDEINVCLLNTGKG 204 (581)
Q Consensus 131 ~v~~~~~~~ylVRl~F~~~~yd~-~~~~~~F~v~i~~~~~~-~v~~---~~-~~~~~~~E~i~~~~~~~l~v~l~~~~~~ 204 (581)
++++++ +|+|||||++..... ....++|+|++++.... .++. .+ ...++++|+.+.+.++.+.|+|+|....
T Consensus 273 ~v~~~~--~Y~VrLhFaEi~~~~~~~~~R~F~V~ing~~~~~~~di~~~~g~~~~~~~~~~~v~~~~g~l~isl~p~~~s 350 (623)
T PLN03150 273 DVDPNR--NYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVDIVKMSGERYTALVLNKTVAVSGRTLTIVLQPKKGT 350 (623)
T ss_pred ecCCCC--CEEEEEEEEeccCccCCCceEEEEEEECCEEeecccChhhhcCCcccceEEEeEEeecCCeEEEEEeeCCCC
Confidence 999888 999999999764321 22238999999985322 1121 21 3468999999988888899999998877
Q ss_pred CceeeeeeeeecCc
Q 008008 205 TPFISALELRHFHN 218 (581)
Q Consensus 205 ~pfIn~iEi~~l~~ 218 (581)
.|+||||||+++..
T Consensus 351 ~pilNaiEI~~~~~ 364 (623)
T PLN03150 351 HAIINAIEVFEIIT 364 (623)
T ss_pred cceeeeeeeeeccc
Confidence 89999999998875
No 4
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.
Probab=99.39 E-value=5.9e-13 Score=126.35 Aligned_cols=138 Identities=19% Similarity=0.323 Sum_probs=81.5
Q ss_pred EEEecCCCCCCcccCCCCceeecCCcccccCCCc-----------cccccccccccccccceeeeeeCCCCceeEEecCC
Q 008008 65 ISIDCGVPAGFMYLDEKTQLSYKSDEEFIRTGVN-----------KNISSKFMSANLQNTYATVRSFPEGNRNCYSLRPP 133 (581)
Q Consensus 65 ~~IdCG~~~~~~~~D~~~~~~w~~D~~~~~~g~~-----------~~i~~~~~~~~~~~~y~t~R~f~~~~~~~Y~~~v~ 133 (581)
++||||++. ++| ..++.|.+|..|...... ............+.+|+|.|+-+. ...|.+|+.
T Consensus 3 ~~IN~Gg~~---~~~-~~g~~w~~D~~~~~g~~~y~~~~~~~~~~~~~~~~i~~t~d~~Lyqt~R~g~~--~f~Y~ip~~ 76 (174)
T PF11721_consen 3 LRINAGGPA---YTD-SSGIVWEADQYYTGGSWGYYVSSDNNGSTSSTNSSIPGTTDDPLYQTERYGPS--SFSYDIPVV 76 (174)
T ss_dssp EEEEETSSS---EEE-TTTEEE-SSSSSTTSS-----------SSTTS--TTS-HHHHHTTT-----SS--SEEEEEE--
T ss_pred EEEECCCCc---ccC-CCCCEEcCCCCCCCCCcccccccccccccccccccccCCCchhhhHhhcCCCC--ceEEEEecC
Confidence 799999864 344 479999999977544330 011111111234589999999654 479999966
Q ss_pred CCCcccEEEEEEeecCCCCC------CCCCceEEEEEccee-eEEEEe---cCC-CccEEEEE-EEEccCCcEEEEEee-
Q 008008 134 EGKAKTYLTRASFMYGDYDD------EDKLPEFDLYIGVNR-WDSIKF---DNA-SHVVIKEI-IHSALMDEINVCLLN- 200 (581)
Q Consensus 134 ~~~~~~ylVRl~F~~~~yd~------~~~~~~F~v~i~~~~-~~~v~~---~~~-~~~~~~E~-i~~~~~~~l~v~l~~- 200 (581)
+.+ .|.|||||....+.. .++ ++|||+++++. ...++. .+. ..++++++ -+.+.++.|.|+|..
T Consensus 77 ~~G--~Y~V~L~FaE~~~~~~~~~~~~G~-RvFdV~v~g~~vl~~~Di~~~~G~~~~~~~~~~~~v~v~dg~L~i~f~~~ 153 (174)
T PF11721_consen 77 PNG--TYTVRLHFAELYFGASGGASGPGQ-RVFDVYVNGETVLKNFDIYAEAGGFNKAAVRRFFNVTVTDGTLNIQFVWA 153 (174)
T ss_dssp S-E--EEEEEEEEE-SSS--------SSS-S-EEEEETTEEEEEEE-HHHHHSSSS---EEEEEEEEEETTEEETTEEEE
T ss_pred CCc--EEEEEEEeccccccccccccCCCc-eEEEEEecceEEEeccCHHHHcCCCceEEEEEEEEEEEeCCcEEEEEEec
Confidence 665 999999999776665 566 89999999842 222222 122 33688888 667789999999996
Q ss_pred ----------CCCCCceeeee
Q 008008 201 ----------TGKGTPFISAL 211 (581)
Q Consensus 201 ----------~~~~~pfIn~i 211 (581)
...+.|.||||
T Consensus 154 ~~~~~~i~~~~~~~~p~IsaI 174 (174)
T PF11721_consen 154 GKGTLCIPFIGSYGNPLISAI 174 (174)
T ss_dssp --SEEEEEEESSSSSSSEEEE
T ss_pred CCCcEEeeccccCCCcEEeeC
Confidence 44566888876
No 5
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []. This entry represents a malectin-like domain found in a number of plant receptor kinases.
Probab=99.37 E-value=3.2e-12 Score=134.49 Aligned_cols=147 Identities=19% Similarity=0.231 Sum_probs=102.3
Q ss_pred cEEEecCCCC-CCcccCCCCceeecCC---ccc--ccCCCccccc---cccccccccccceeeeeeCCCC---ceeEEec
Q 008008 64 DISIDCGVPA-GFMYLDEKTQLSYKSD---EEF--IRTGVNKNIS---SKFMSANLQNTYATVRSFPEGN---RNCYSLR 131 (581)
Q Consensus 64 f~~IdCG~~~-~~~~~D~~~~~~w~~D---~~~--~~~g~~~~i~---~~~~~~~~~~~y~t~R~f~~~~---~~~Y~~~ 131 (581)
++|+|||++. ...|.|+..+|.|.+. ... +.+.. .+. .......|..+|+|||...... ..+|.+
T Consensus 180 ~~R~n~G~~~~~iryp~D~~dR~W~~~~~~~~~~~ist~~--~i~~~~~~~~~~~P~~V~~TA~~~~~~s~~~nltw~~- 256 (347)
T PF12819_consen 180 VYRLNVGGSSSFIRYPDDTYDRIWQPYSSSPGWSNISTTS--NININSSNNPYDAPSAVYQTARTPSNSSDPLNLTWSF- 256 (347)
T ss_pred EEeecCCCcccccCCCCCcceeeccccccCccccccccce--eeecccCCccCcChHHHHHhhhcccccccceEEEecc-
Confidence 6899999874 2567777799999953 111 11211 122 1111123568999999998543 458888
Q ss_pred CCCCCcccEEEEEEeecCCCC--CCCCCceEEEEEcceeeE-EEE---ecCCCccEEEEEEEEccC-CcEEEEEeeCCCC
Q 008008 132 PPEGKAKTYLTRASFMYGDYD--DEDKLPEFDLYIGVNRWD-SIK---FDNASHVVIKEIIHSALM-DEINVCLLNTGKG 204 (581)
Q Consensus 132 v~~~~~~~ylVRl~F~~~~yd--~~~~~~~F~v~i~~~~~~-~v~---~~~~~~~~~~E~i~~~~~-~~l~v~l~~~~~~ 204 (581)
++++. .|+||+|||..... +.+ .+.|+|+++++.|. .+. +.....++++++++.+++ +.+.|+|+++..+
T Consensus 257 ~~~~~--~y~v~lHFaEi~~~~~~~~-~R~F~IyiN~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~isL~~t~~S 333 (347)
T PF12819_consen 257 VDPGF--SYYVRLHFAEIQSLSPNNN-QREFDIYINGQTAYSDVSPPYLGADTVPYYSDYVVNVPDSGFLNISLGPTPDS 333 (347)
T ss_pred CCCCc--cEEEEEEEeecccccCCCC-eEEEEEEECCeEccCccCcccccCcceEeecceEEEecCCCEEEEEEEeCCCC
Confidence 88888 99999999975442 223 38999999997664 222 122345678999998865 4699999998766
Q ss_pred --Cceeeeeeeeec
Q 008008 205 --TPFISALELRHF 216 (581)
Q Consensus 205 --~pfIn~iEi~~l 216 (581)
-|+|||+||+++
T Consensus 334 ~lppiLNalEIy~v 347 (347)
T PF12819_consen 334 TLPPILNALEIYKV 347 (347)
T ss_pred CcCceeEeeeeEeC
Confidence 499999999975
No 6
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.
Probab=99.26 E-value=2.5e-12 Score=122.11 Aligned_cols=130 Identities=18% Similarity=0.175 Sum_probs=70.4
Q ss_pred EEeeecCCCCCccccCCCCCCCCccCCCCCCCC-Cee--eecc--e--eeeccCCCCCCchHHHHHhcccCCCCCcceEE
Q 008008 231 YRRLDVGSTTTQIIRFKDDHYDRIWVPYPGFPG-SAS--INTS--F--IIDSLVDSQYRLPSAVMKTAVKPMNVNDSLDF 303 (581)
Q Consensus 231 ~~Rin~G~~~~~~ir~~~D~~dR~W~~d~~~~~-~~~--~st~--~--~i~~~~~~~~~~P~~Vy~TA~~~~~~~~~~~~ 303 (581)
++||||||+. + .|..++.|.+|. .+. ... .... . ............+..+|||+|.... .+.|
T Consensus 2 ~~~IN~Gg~~-----~-~~~~g~~w~~D~-~~~~g~~~y~~~~~~~~~~~~~~~~i~~t~d~~Lyqt~R~g~~---~f~Y 71 (174)
T PF11721_consen 2 VLRINAGGPA-----Y-TDSSGIVWEADQ-YYTGGSWGYYVSSDNNGSTSSTNSSIPGTTDDPLYQTERYGPS---SFSY 71 (174)
T ss_dssp EEEEEETSSS-----E-EETTTEEE-SSS-SSTTSS-----------SSTTS--TTS-HHHHHTTT-----SS---SEEE
T ss_pred EEEEECCCCc-----c-cCCCCCEEcCCC-CCCCCCcccccccccccccccccccccCCCchhhhHhhcCCCC---ceEE
Confidence 6899999975 3 677899999997 331 111 1110 0 0011112344567899999999543 2444
Q ss_pred EEecCCCCccEEEEEEeeeccccC------CCCeEEEEEEECCEEeccccccc------c--eeeeeEEeeecCCCCeEE
Q 008008 304 DFEIGDPTLQFYVYMHFAELESRQ------GNQYREFSIELNGNLWEKSVVPE------Y--LQSKTISSTQPARGSKLN 369 (581)
Q Consensus 304 t~~~~~~~~~y~vrLhF~ei~~~~------~~~~R~F~V~ing~~~~~~~~p~------~--~~~~~v~~~~~~~~~~~~ 369 (581)
.. |..+++.|.|+|||||+.... +++ |+|||+|||+.+.++|++. . ....+ ... .+..|.++
T Consensus 72 ~i-p~~~~G~Y~V~L~FaE~~~~~~~~~~~~G~-RvFdV~v~g~~vl~~~Di~~~~G~~~~~~~~~~-~~v-~v~dg~L~ 147 (174)
T PF11721_consen 72 DI-PVVPNGTYTVRLHFAELYFGASGGASGPGQ-RVFDVYVNGETVLKNFDIYAEAGGFNKAAVRRF-FNV-TVTDGTLN 147 (174)
T ss_dssp EE-E--S-EEEEEEEEEE-SSS--------SSS-S-EEEEETTEEEEEEE-HHHHHSSSS---EEEE-EEE-EEETTEEE
T ss_pred EE-ecCCCcEEEEEEEeccccccccccccCCCc-eEEEEEecceEEEeccCHHHHcCCCceEEEEEE-EEE-EEeCCcEE
Confidence 44 236679999999999998766 777 9999999999988765421 1 11111 111 24567888
Q ss_pred EEEee
Q 008008 370 FSLCK 374 (581)
Q Consensus 370 isl~~ 374 (581)
|.|..
T Consensus 148 i~f~~ 152 (174)
T PF11721_consen 148 IQFVW 152 (174)
T ss_dssp TTEEE
T ss_pred EEEEe
Confidence 88874
No 7
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.21 E-value=3.4e-11 Score=143.74 Aligned_cols=131 Identities=29% Similarity=0.475 Sum_probs=99.7
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHH-----------
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSL----------- 514 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l----------- 514 (581)
..++.|+|++|.++|.+|..+..+++|+.|+|++|+++|.+|..+..++.|+.|++++|++.|.+|..-
T Consensus 523 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~ 602 (968)
T PLN00113 523 KKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVA 602 (968)
T ss_pred cCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhc
Confidence 567888888999888888888888999999999999999999988888999999999999888777320
Q ss_pred -----H--------------------------------------------hhcc----------CCc--c----------
Q 008008 515 -----V--------------------------------------------ARSQ----------NGS--L---------- 523 (581)
Q Consensus 515 -----~--------------------------------------------~~~~----------~~~--~---------- 523 (581)
+ ++.+ .+. .
T Consensus 603 ~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (968)
T PLN00113 603 GNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKS 682 (968)
T ss_pred CCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchh
Confidence 0 0000 000 0
Q ss_pred -----------eEEeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 524 -----------LLRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 524 -----------~l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
...++|+|+||.||+|+. .++..||||+++..... ..+|++.+++ |||||+++
T Consensus 683 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~ 749 (968)
T PLN00113 683 ITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLI 749 (968)
T ss_pred hhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEE
Confidence 001689999999999997 57889999999644322 2346788888 99999986
No 8
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.77 E-value=9.2e-09 Score=108.93 Aligned_cols=67 Identities=43% Similarity=0.615 Sum_probs=54.9
Q ss_pred HHhhccCCcceEEeeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 514 LVARSQNGSLLLRILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 514 l~~~~~~~~~~l~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
+..+++++.... +||+|+||.||+|.+++|+.||||+++....+..+||.+|+++|++ |||||+|++
T Consensus 70 l~~AT~~Fs~~~-~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 70 LRKATNNFSESN-LIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred HHHHHhCCchhc-ceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEE
Confidence 444455555444 7999999999999999999999999976544326789999999999 999999974
No 9
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=98.66 E-value=3.6e-08 Score=117.92 Aligned_cols=104 Identities=29% Similarity=0.646 Sum_probs=82.5
Q ss_pred Ccchhhhhhhhhhhcc----CCCCCCC-CCCCCCcccccCccCCCCCCCCCceeEeecCCCCCceecchhhhcccCCCeE
Q 008008 401 DQDDVNAIMDIKLSYD----LGKGWQG-DPCSPMYYSWDGLNCSYNGYKPPKIISLNLTSEGLTGKISPSLSNLKSLENL 475 (581)
Q Consensus 401 ~~~d~~aL~~~k~~~~----~~~~W~g-~pC~~~~~~W~Gv~C~~~~~~~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L 475 (581)
.++|..+|+++|..+. ...+|.. +.| |.|.||.|+.. .+|+.|+|++|+++|.+|..+..++.|+.|
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~----c~w~gv~c~~~----~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L 98 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSADV----CLWQGITCNNS----SRVVSIDLSGKNISGKISSAIFRLPYIQTI 98 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCCC----CcCcceecCCC----CcEEEEEecCCCccccCChHHhCCCCCCEE
Confidence 5578999999998774 2457853 334 38999999753 478999999999888888888888899999
Q ss_pred eCCCCCCCCCcccccc-CCCccccccccCccCCCCCch
Q 008008 476 DLSNNSLTGSIPEFLS-QLPLLRVLNLDGNKLSGSVPT 512 (581)
Q Consensus 476 ~Ls~N~l~G~iP~~l~-~l~~L~~L~ls~N~l~G~iP~ 512 (581)
+|++|+++|.+|..+. .+++|++|+|++|+++|.+|.
T Consensus 99 ~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~ 136 (968)
T PLN00113 99 NLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR 136 (968)
T ss_pred ECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc
Confidence 9999988888887765 777888888887777776664
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.98 E-value=1.4e-06 Score=97.67 Aligned_cols=55 Identities=29% Similarity=0.395 Sum_probs=47.6
Q ss_pred eeccCCceeeeeeeecC------CceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~------g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
.+|+|.||+||+|+..+ -+.||||.|++...+ ..++|++|+++|+. |||||+|++
T Consensus 493 eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlG 556 (774)
T KOG1026|consen 493 ELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLG 556 (774)
T ss_pred hhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 78999999999999632 358999999876544 78999999999999 999999974
No 11
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=97.96 E-value=4.5e-06 Score=64.74 Aligned_cols=61 Identities=49% Similarity=0.662 Sum_probs=53.3
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccC
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKL 506 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l 506 (581)
++++.|+|++|.++.--+..|..+++|+.|++++|.++.--|..+..+++|+.|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3688999999999855456789999999999999999866667889999999999999975
No 12
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=97.81 E-value=1.3e-05 Score=82.16 Aligned_cols=52 Identities=29% Similarity=0.495 Sum_probs=41.6
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
+++|.|+||.||+|.+. .+..||||+.-...+ .=-+|+++|.+ |||||+|+|
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~ 84 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLY 84 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEE
Confidence 48999999999999985 468999999854432 22367888888 999999976
No 13
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.78 E-value=1.7e-05 Score=82.50 Aligned_cols=54 Identities=26% Similarity=0.444 Sum_probs=44.9
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||.|.|+.||+|+. .++..||||.+.... ....+-...||.+|+. |||||.|+
T Consensus 17 ~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~ 75 (429)
T KOG0595|consen 17 EIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLL 75 (429)
T ss_pred hccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEE
Confidence 589999999999997 467899999996553 2334557899999999 99999985
No 14
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=97.78 E-value=2.4e-05 Score=82.76 Aligned_cols=55 Identities=36% Similarity=0.570 Sum_probs=45.7
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCC--hHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQG--PKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~--~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
.+|.|+||+||+|.+.+-..||||++....... .++|..|+.+|++ |||||.|++
T Consensus 48 ~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G 106 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYG 106 (362)
T ss_pred hcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEE
Confidence 489999999999999855559999997543222 5699999999999 999999863
No 15
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=97.72 E-value=3.3e-05 Score=83.85 Aligned_cols=52 Identities=31% Similarity=0.565 Sum_probs=44.3
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCC--CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSS--QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~--~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|.||+||+|.|.+ .||||.|+.... ...+.|.+|+.++++ |.||+-++
T Consensus 399 rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFM 454 (678)
T KOG0193|consen 399 RIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFM 454 (678)
T ss_pred eeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeee
Confidence 79999999999999974 599999986533 246889999999999 99998664
No 16
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=97.70 E-value=2.7e-05 Score=83.36 Aligned_cols=54 Identities=30% Similarity=0.505 Sum_probs=48.3
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
.||+|-||.|+.|.+++...||||.++.. ....++|.+|+++|.+ |+|||+|++
T Consensus 213 ~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~g 268 (468)
T KOG0197|consen 213 ELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYG 268 (468)
T ss_pred HhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEE
Confidence 68999999999999998889999999876 3456889999999999 999999973
No 17
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.68 E-value=2.6e-05 Score=90.62 Aligned_cols=56 Identities=41% Similarity=0.579 Sum_probs=47.6
Q ss_pred EeeccCCceeeeeeeecC--Cc----eEEEEeeccC-CCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 526 RILGKGGFGTVYHGYLAD--GS----EVAIKMLSAS-SSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~--g~----~VAVK~l~~~-~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
+.||+|.||.||+|++.+ |. .||||.++.. +.|...+|.+|..+|++ |||||+|++
T Consensus 698 ~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liG 762 (1025)
T KOG1095|consen 698 RVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIG 762 (1025)
T ss_pred eeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEE
Confidence 489999999999999854 32 4999999754 45667899999999999 999999974
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.68 E-value=4.1e-05 Score=81.49 Aligned_cols=55 Identities=24% Similarity=0.359 Sum_probs=46.1
Q ss_pred EeeccCCceeeeeee-ecCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGY-LADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|-||.|||++ +.+|..||+|++.... .....-..+||.+|++ |||||+|.
T Consensus 123 ~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~ 182 (560)
T KOG0600|consen 123 EKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLE 182 (560)
T ss_pred HHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCccccee
Confidence 479999999999999 6789999999997554 2334556899999999 99999985
No 19
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=97.63 E-value=3.1e-05 Score=83.79 Aligned_cols=55 Identities=33% Similarity=0.481 Sum_probs=45.3
Q ss_pred eeccCCceeeeeeeecC--C---ceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLAD--G---SEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~--g---~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
.+|+|.||.||+|.+.. + ..||||..+.. .....++|..|.+++.+ |||||+|++
T Consensus 164 kLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 164 KLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred eeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 68999999999999843 2 23899998752 23446899999999999 999999975
No 20
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=97.62 E-value=5.3e-05 Score=81.87 Aligned_cols=55 Identities=22% Similarity=0.359 Sum_probs=49.2
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
.||+|.||.|..-+++.+..||||.+++.... ..++|..||++|++ |||||+|++
T Consensus 545 kiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvG 602 (807)
T KOG1094|consen 545 KIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLG 602 (807)
T ss_pred hhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEe
Confidence 68999999999999998899999999976554 45899999999999 999999863
No 21
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.53 E-value=2.2e-05 Score=78.04 Aligned_cols=54 Identities=30% Similarity=0.517 Sum_probs=45.6
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+||+|.||.|||+. +.+|..||.|.++-. ..+..+....||.+|++ |||||+.+
T Consensus 26 ~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy 84 (375)
T KOG0591|consen 26 KIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYY 84 (375)
T ss_pred HHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 79999999999988 688999999998733 23345678999999999 99999864
No 22
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=97.51 E-value=0.00011 Score=72.59 Aligned_cols=54 Identities=28% Similarity=0.463 Sum_probs=45.2
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeeccCC-CCC-hHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLSASS-SQG-PKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~~-~~~-~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|.||.||+|+ ...|+.||||+++... .+| ...-.+||+.|+. |+|||.|+
T Consensus 9 ~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~Li 67 (318)
T KOG0659|consen 9 KLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELI 67 (318)
T ss_pred hhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhh
Confidence 68999999999999 4678999999997553 234 3567899999999 99999885
No 23
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=97.49 E-value=6.4e-05 Score=83.72 Aligned_cols=55 Identities=29% Similarity=0.387 Sum_probs=46.4
Q ss_pred eeccCCceeeeeeeecC----CceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLAD----GSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~----g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
+||.|.||.|++|+|+- -..||||.|+.... ....+|..|..+|.+ ||||++|.+
T Consensus 636 VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEG 697 (996)
T KOG0196|consen 636 VIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEG 697 (996)
T ss_pred EEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEE
Confidence 89999999999999842 24899999987643 345799999999999 999999853
No 24
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.48 E-value=0.00013 Score=76.77 Aligned_cols=70 Identities=33% Similarity=0.521 Sum_probs=53.5
Q ss_pred CCCCchHHHhhccCCcceE-EeeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc----CCCccccc
Q 008008 507 SGSVPTSLVARSQNGSLLL-RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY----YKNLSPTY 580 (581)
Q Consensus 507 ~G~iP~~l~~~~~~~~~~l-~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~----H~NlV~l~ 580 (581)
+|+=++-+.+++-..+..+ .+||+|.||.|++|.|+ |..||||.+... ..+.+.+|.++-.. |+||..++
T Consensus 197 SGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFI 271 (513)
T KOG2052|consen 197 SGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFI 271 (513)
T ss_pred CCCCchhHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhh
Confidence 4555566666665555543 48999999999999998 688999999543 45678888887766 99998775
No 25
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=97.44 E-value=0.00014 Score=79.05 Aligned_cols=55 Identities=29% Similarity=0.480 Sum_probs=46.6
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+++|+|||..||.++- +.|..||+|++.... ....+...+||++.++ |||||+++
T Consensus 24 ~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~ 84 (592)
T KOG0575|consen 24 RFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFY 84 (592)
T ss_pred eeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeee
Confidence 3899999999999996 889999999996532 2234678999999999 99999986
No 26
>PHA02988 hypothetical protein; Provisional
Probab=97.44 E-value=0.00018 Score=73.50 Aligned_cols=53 Identities=15% Similarity=0.295 Sum_probs=45.3
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCC---hHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQG---PKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~---~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||+|.+ +|..||||+++...... .+.|.+|+++|.+ |||||+++
T Consensus 27 ~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~ 84 (283)
T PHA02988 27 LIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY 84 (283)
T ss_pred EEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 689999999999998 57899999997654333 4678899999999 99999986
No 27
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=97.38 E-value=0.00017 Score=80.81 Aligned_cols=55 Identities=35% Similarity=0.451 Sum_probs=46.5
Q ss_pred eeccCCceeeeeeee-cCC----ceEEEEeeccC-CCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYL-ADG----SEVAIKMLSAS-SSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g----~~VAVK~l~~~-~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
++|.|.||+||||.| ++| .+||||++... +.+..+||.+|+-.|++ |+||++|+.
T Consensus 703 vLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLg 765 (1177)
T KOG1025|consen 703 VLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLG 765 (1177)
T ss_pred eeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhh
Confidence 899999999999997 455 37899998654 44557899999999999 999999974
No 28
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=97.37 E-value=0.00016 Score=72.71 Aligned_cols=54 Identities=26% Similarity=0.299 Sum_probs=44.4
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC-CCh-HHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS-QGP-KQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~-~~~-~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.|||.+- +.|+.||||++.++.. +.. +--.+||++|++ |+|||.|+
T Consensus 9 kvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLi 67 (396)
T KOG0593|consen 9 KVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLI 67 (396)
T ss_pred ccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 689999999999885 4689999999966543 333 446899999999 99999885
No 29
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=97.35 E-value=0.0002 Score=78.98 Aligned_cols=66 Identities=27% Similarity=0.363 Sum_probs=52.4
Q ss_pred CCchHHHhhccCCcceEEeeccCCceeeeeeeec--CCc--eEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCcccccC
Q 008008 509 SVPTSLVARSQNGSLLLRILGKGGFGTVYHGYLA--DGS--EVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 509 ~iP~~l~~~~~~~~~~l~~iG~g~fg~Vykg~l~--~g~--~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
-||.+-++... .+|+|.||.|++|.|. +|. .||||.|+..... ...+|.+|+.+|.+ |||||+|++
T Consensus 106 lIpee~i~l~e-------~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyG 178 (1039)
T KOG0199|consen 106 LIPEEQIKLYE-------LLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYG 178 (1039)
T ss_pred eccHHHHHHHH-------HhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEee
Confidence 46655444433 6899999999999984 343 7899999876543 67899999999998 999999985
No 30
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=97.32 E-value=0.00026 Score=66.05 Aligned_cols=54 Identities=24% Similarity=0.311 Sum_probs=44.7
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeecc--CCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSA--SSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~--~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|.+|+|+||+- +.++.||+|+.+. ..++-...-.+||-+|+. |+|||+|+
T Consensus 9 kigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~ 67 (292)
T KOG0662|consen 9 KIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLH 67 (292)
T ss_pred hhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehh
Confidence 689999999999994 5678999998763 333445778999999998 99999985
No 31
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=97.21 E-value=0.00014 Score=80.44 Aligned_cols=54 Identities=31% Similarity=0.545 Sum_probs=46.4
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|+ -..|+.||||..+..+ ....+...+|+++|+| |+|||++.
T Consensus 20 ~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f 77 (732)
T KOG4250|consen 20 RLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLF 77 (732)
T ss_pred hhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhc
Confidence 68999999999999 6789999999997644 3345678999999999 99999874
No 32
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=97.21 E-value=0.00027 Score=70.97 Aligned_cols=54 Identities=31% Similarity=0.575 Sum_probs=44.3
Q ss_pred eeccCCceeeeeeeec-----CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-----DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-----~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||.|.||.||+|.+. .+..|+||.++.... ...++|.+|++.+++ |||||+++
T Consensus 6 ~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~ 67 (259)
T PF07714_consen 6 QIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLY 67 (259)
T ss_dssp EEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EE
T ss_pred EEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccc
Confidence 6899999999999987 246899999965432 236899999999999 99999875
No 33
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=97.19 E-value=0.0004 Score=70.73 Aligned_cols=53 Identities=23% Similarity=0.337 Sum_probs=43.1
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC-CC-hHHHHHHHHHHhc--CCCcccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS-QG-PKQFRTEVELIDY--YKNLSPT 579 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~-~~-~~ef~~Ei~~l~~--H~NlV~l 579 (581)
.|++|.||.||+|+- .+++.||+|+++.... .| .---.+||++|.+ |||||.+
T Consensus 83 rI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~v 140 (419)
T KOG0663|consen 83 RIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEV 140 (419)
T ss_pred hcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeee
Confidence 689999999999995 4678999999985532 23 2356899999999 9999976
No 34
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=97.16 E-value=0.00035 Score=75.50 Aligned_cols=54 Identities=31% Similarity=0.511 Sum_probs=44.2
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCC--CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS--QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~--~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|.||.||||+-+ +...||+|.+.+..+ ...+...+||+++++ |||||.++
T Consensus 9 ~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~ 67 (808)
T KOG0597|consen 9 MIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEML 67 (808)
T ss_pred HhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHH
Confidence 6899999999999965 457899999865432 335668999999999 99999875
No 35
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=97.15 E-value=0.00047 Score=69.22 Aligned_cols=54 Identities=28% Similarity=0.449 Sum_probs=46.6
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|... ++..||+|.+.....+..+++.+|++++++ |+|||+++
T Consensus 15 ~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 71 (268)
T cd06624 15 VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYL 71 (268)
T ss_pred EEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeee
Confidence 7899999999999964 577899999876655566789999999999 99999875
No 36
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=97.15 E-value=0.00042 Score=70.22 Aligned_cols=55 Identities=31% Similarity=0.465 Sum_probs=46.3
Q ss_pred EeeccCCceeeeeeeec-----CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-----DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-----~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||++... ++..||||+++.......++|.+|++++++ |||||+++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 71 (284)
T cd05081 10 QQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYK 71 (284)
T ss_pred eeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEE
Confidence 47999999999999853 477899999976655556789999999999 99999864
No 37
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=97.14 E-value=0.00065 Score=67.85 Aligned_cols=54 Identities=37% Similarity=0.612 Sum_probs=46.5
Q ss_pred EeeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++...++..+|+|.+.... ...++|.+|++++++ |+||++++
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~ 67 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLY 67 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEE
Confidence 4799999999999999889999999996443 346789999999999 99998764
No 38
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.12 E-value=0.0002 Score=83.43 Aligned_cols=56 Identities=38% Similarity=0.497 Sum_probs=45.7
Q ss_pred EEeeccCCceeeeeeee-cCCceEEEEeeccC-CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYL-ADGSEVAIKMLSAS-SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~-~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.++|+||||.|||++= -||+.+|||++... +.+......+|+.+|++ |||+|+.+
T Consensus 484 L~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYy 543 (1351)
T KOG1035|consen 484 LELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYY 543 (1351)
T ss_pred HHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 44799999999999983 47999999998543 23334667899999999 99999875
No 39
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.11 E-value=0.00035 Score=50.44 Aligned_cols=36 Identities=56% Similarity=0.784 Sum_probs=22.4
Q ss_pred CCCeEeCCCCCCCCCccccccCCCccccccccCccCC
Q 008008 471 SLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 471 ~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~ 507 (581)
+|+.|+|++|+++ .+|..+++|+.|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4666666666666 56666666666666666666665
No 40
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=97.07 E-value=0.00052 Score=77.64 Aligned_cols=54 Identities=22% Similarity=0.452 Sum_probs=48.8
Q ss_pred eeccCCceeeeeeeecCC-ceEEEEeeccCCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADG-SEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g-~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.|-+|||+.||.+....+ ..+|+||+-...+++.+...+||++|++ |||||.++
T Consensus 44 vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yi 101 (738)
T KOG1989|consen 44 VLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYI 101 (738)
T ss_pred EEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEe
Confidence 789999999999998766 9999999976677788999999999998 99999875
No 41
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=97.06 E-value=0.00061 Score=68.50 Aligned_cols=55 Identities=33% Similarity=0.433 Sum_probs=44.1
Q ss_pred EeeccCCceeeeeeeec----CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA----DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~----~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||+|.+. .+..||+|.++.... ...+.|.+|++++++ |||||+++
T Consensus 11 ~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 72 (266)
T cd05064 11 RILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLE 72 (266)
T ss_pred eeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEE
Confidence 37899999999999863 356899999975432 224679999999999 99999875
No 42
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=97.06 E-value=0.00025 Score=75.12 Aligned_cols=50 Identities=26% Similarity=0.522 Sum_probs=43.2
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc----CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY----YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~----H~NlV~l~ 580 (581)
++|+|+||.||||+|.+ +.||||.+.. +..+.|++|-++.+- |+||++++
T Consensus 217 li~~Grfg~V~KaqL~~-~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi 270 (534)
T KOG3653|consen 217 LIGRGRFGCVWKAQLDN-RLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFI 270 (534)
T ss_pred HhhcCccceeehhhccC-ceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhh
Confidence 68999999999999985 8999999954 456779999888775 99999986
No 43
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=97.02 E-value=0.00066 Score=69.72 Aligned_cols=54 Identities=26% Similarity=0.377 Sum_probs=43.0
Q ss_pred eeccCCceeeeeeeecC-----------------CceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-----------------GSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-----------------g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||++..++ +..||+|.+..... ...++|.+|+++|.+ |||||+++
T Consensus 12 ~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 85 (304)
T cd05096 12 KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLL 85 (304)
T ss_pred EecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEE
Confidence 78999999999998643 33699999875432 234689999999999 99999875
No 44
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=97.01 E-value=0.001 Score=66.33 Aligned_cols=54 Identities=28% Similarity=0.402 Sum_probs=45.8
Q ss_pred EeeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++.+.++..+|+|.++.. ....++|..|+++|++ ||||++++
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~ 65 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLY 65 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEE
Confidence 378999999999999988889999988633 3345789999999999 99999875
No 45
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=97.00 E-value=0.00056 Score=74.67 Aligned_cols=55 Identities=25% Similarity=0.491 Sum_probs=45.2
Q ss_pred eeccCCceeeeeeeecC---C--ceEEEEeeccC-CCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLAD---G--SEVAIKMLSAS-SSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~---g--~~VAVK~l~~~-~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
+||+|-||.||+|...+ | ..||||.-+.+ .....+.|..|.-+|++ |||||+|++
T Consensus 396 ~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIG 458 (974)
T KOG4257|consen 396 LIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIG 458 (974)
T ss_pred hhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheee
Confidence 89999999999999733 3 36889987653 33446889999999999 999999985
No 46
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=96.99 E-value=0.0011 Score=66.31 Aligned_cols=54 Identities=33% Similarity=0.600 Sum_probs=46.2
Q ss_pred EeeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|++|.||+|...++..||+|.++... ...++|.+|++++++ |+||++++
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~ 67 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLY 67 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCcccee
Confidence 4789999999999998878899999996543 346789999999999 99999764
No 47
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=96.96 E-value=0.0006 Score=71.20 Aligned_cols=55 Identities=25% Similarity=0.420 Sum_probs=43.3
Q ss_pred EeeccCCceeeeeeee------cCCceEEEEeeccCCC-CChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL------ADGSEVAIKMLSASSS-QGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l------~~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
+.||+|+||.||++.. .++..||||+++.... ...+.+.+|+++|.+ |||||+++
T Consensus 13 ~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~ 77 (338)
T cd05102 13 KVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLL 77 (338)
T ss_pred eEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEE
Confidence 3789999999999974 2346799999975432 234679999999987 99999875
No 48
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=96.96 E-value=0.00092 Score=71.27 Aligned_cols=54 Identities=28% Similarity=0.449 Sum_probs=42.9
Q ss_pred eeccCCceeeeeeee------cCCceEEEEeeccCCC-CChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL------ADGSEVAIKMLSASSS-QGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l------~~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+|+||.||++.. +.+..||||+++.... ...+.+.+|+++|.+ |||||+++
T Consensus 42 ~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~ 105 (375)
T cd05104 42 TLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLL 105 (375)
T ss_pred eecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeee
Confidence 789999999999874 2356899999975432 334678999999986 99999875
No 49
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=96.95 E-value=0.0011 Score=66.20 Aligned_cols=54 Identities=31% Similarity=0.583 Sum_probs=46.2
Q ss_pred EeeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|++|.||+|...++..||+|.+.... ...++|.+|++++++ |+||++++
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~ 67 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLY 67 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEE
Confidence 3789999999999998888899999986532 346789999999999 99999874
No 50
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=96.94 E-value=0.001 Score=71.70 Aligned_cols=54 Identities=28% Similarity=0.428 Sum_probs=42.8
Q ss_pred eeccCCceeeeeeeec------CCceEEEEeeccCCCC-ChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA------DGSEVAIKMLSASSSQ-GPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~------~g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+|+||.||+|... .+..||||+++..... ..+.|.+|+++|++ |||||+++
T Consensus 44 ~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~ 107 (400)
T cd05105 44 ILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLL 107 (400)
T ss_pred eecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEE
Confidence 7899999999999852 1346999999754332 34679999999997 99999986
No 51
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=96.90 E-value=0.00099 Score=69.64 Aligned_cols=55 Identities=31% Similarity=0.519 Sum_probs=43.1
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCC--C---hHH--HHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQ--G---PKQ--FRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~--~---~~e--f~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.|-.|.- .+|..||||.++..... . .++ ..+|+++|++ |||||+++
T Consensus 178 ~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~ 242 (475)
T KOG0615|consen 178 KTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIK 242 (475)
T ss_pred eeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEe
Confidence 3789999999999884 57899999999753211 1 122 3699999999 99999875
No 52
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=96.90 E-value=0.0011 Score=68.50 Aligned_cols=55 Identities=33% Similarity=0.558 Sum_probs=43.8
Q ss_pred EeeccCCceeeeeeeec-CCc----eEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGS----EVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~----~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||+|.+. ++. .||||.++.... ...++|.+|+.++++ |||||+++
T Consensus 13 ~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~ 75 (316)
T cd05108 13 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLL 75 (316)
T ss_pred eeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 47999999999999863 343 489999975432 345789999999999 99999875
No 53
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=96.89 E-value=0.0016 Score=66.48 Aligned_cols=55 Identities=25% Similarity=0.336 Sum_probs=45.0
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... ++..||+|.++... .+....+.+|++++++ |||||+++
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 69 (288)
T cd07871 11 DKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLH 69 (288)
T ss_pred eEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEE
Confidence 47999999999999864 67899999986443 2334678899999999 99999874
No 54
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.88 E-value=0.0016 Score=65.27 Aligned_cols=54 Identities=19% Similarity=0.352 Sum_probs=45.4
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|.. .++..||+|+++.......+.+.+|+.++.+ |+||++++
T Consensus 16 ~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~ 72 (267)
T cd06646 16 RVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYF 72 (267)
T ss_pred eeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeee
Confidence 689999999999996 5678999999975544445678899999998 99999864
No 55
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=96.88 E-value=0.0013 Score=69.44 Aligned_cols=54 Identities=24% Similarity=0.311 Sum_probs=44.6
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||++... +|..||||.+...... ..++|.+|++++++ |+|||+++
T Consensus 81 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 138 (353)
T PLN00034 81 RIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCH 138 (353)
T ss_pred hccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceee
Confidence 6899999999999864 6889999998644322 24679999999999 99999875
No 56
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=96.87 E-value=0.0016 Score=67.16 Aligned_cols=52 Identities=21% Similarity=0.322 Sum_probs=42.5
Q ss_pred eeccCCceeeeeeeec---CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA---DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~---~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++... ++..+|+|.++.. ....++.+|+++|++ |||||+++
T Consensus 8 ~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~ 64 (317)
T cd07868 8 KVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQ 64 (317)
T ss_pred ccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCccee
Confidence 6899999999999864 4568999998643 234568899999999 99999874
No 57
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=96.86 E-value=0.0016 Score=64.96 Aligned_cols=53 Identities=30% Similarity=0.564 Sum_probs=45.7
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||++..+++..+|+|.++.... ..++|.+|++++++ |+|+++++
T Consensus 13 ~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~ 67 (260)
T cd05070 13 KLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLY 67 (260)
T ss_pred eeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEE
Confidence 6899999999999988888999999975433 45789999999999 99998864
No 58
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=96.86 E-value=0.0016 Score=65.16 Aligned_cols=54 Identities=31% Similarity=0.456 Sum_probs=45.6
Q ss_pred EeeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||++...++..+|||.++.. ....++|.+|++++.+ ||||++++
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~ 65 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLY 65 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEE
Confidence 368999999999999887778999998643 2345789999999999 99999875
No 59
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=96.85 E-value=0.00022 Score=66.28 Aligned_cols=66 Identities=30% Similarity=0.504 Sum_probs=49.7
Q ss_pred ceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCC-CCchHH
Q 008008 447 KIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSG-SVPTSL 514 (581)
Q Consensus 447 ~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G-~iP~~l 514 (581)
.+..|++++|++. .+|.+++.++.|+.|+++-|.+. .+|..++.++.|++|||++|+++- .+|..+
T Consensus 57 nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnf 123 (264)
T KOG0617|consen 57 NLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNF 123 (264)
T ss_pred hhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcch
Confidence 4566777777766 57777777888888888877776 678888888888888888888864 456554
No 60
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=96.84 E-value=0.0019 Score=64.40 Aligned_cols=53 Identities=30% Similarity=0.547 Sum_probs=45.9
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||++..+++..+|||.++... ...+++.+|++++++ |+||++++
T Consensus 13 ~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~ 67 (261)
T cd05034 13 KLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLY 67 (261)
T ss_pred eeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeee
Confidence 789999999999998888899999997532 346789999999999 99999875
No 61
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=96.83 E-value=0.0013 Score=70.88 Aligned_cols=54 Identities=24% Similarity=0.405 Sum_probs=43.3
Q ss_pred eeccCCceeeeeeeec------CCceEEEEeeccCCCCC-hHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA------DGSEVAIKMLSASSSQG-PKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~------~g~~VAVK~l~~~~~~~-~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+|+||.||++.+. .+..||||+++...... .+.+..|+++|.+ |||||+++
T Consensus 44 ~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~ 107 (401)
T cd05107 44 TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLL 107 (401)
T ss_pred hccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 6899999999999864 23579999997543332 4579999999997 99999875
No 62
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=96.83 E-value=0.0012 Score=66.59 Aligned_cols=54 Identities=35% Similarity=0.542 Sum_probs=44.8
Q ss_pred eeccCCceeeeeeeecC------CceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~------g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|...+ +..||||.++..... ..++|.+|+++|.+ |+||++++
T Consensus 12 ~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 74 (280)
T cd05049 12 ELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFY 74 (280)
T ss_pred hccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchhee
Confidence 68999999999998743 368999999765444 45789999999999 99999875
No 63
>PRK09188 serine/threonine protein kinase; Provisional
Probab=96.83 E-value=0.0017 Score=68.99 Aligned_cols=52 Identities=21% Similarity=0.314 Sum_probs=41.2
Q ss_pred eeccCCceeeeeeeec--CCceEEEEeeccCC-----CCChHHHHHHHHHHhc--CCCccc
Q 008008 527 ILGKGGFGTVYHGYLA--DGSEVAIKMLSASS-----SQGPKQFRTEVELIDY--YKNLSP 578 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~--~g~~VAVK~l~~~~-----~~~~~ef~~Ei~~l~~--H~NlV~ 578 (581)
.||+|+||.||+|... ++..+|||++.... ....+.|.+|+++|++ |+|+|+
T Consensus 25 ~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~ 85 (365)
T PRK09188 25 VLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVP 85 (365)
T ss_pred EEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCc
Confidence 7899999999999864 57788999875321 1124568999999999 999985
No 64
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=96.81 E-value=0.0012 Score=70.90 Aligned_cols=54 Identities=31% Similarity=0.550 Sum_probs=45.8
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
++|.|.||.||-|+- ..|+.||||.+.+.. .....++.+|+.+|.+ ||.||.|.
T Consensus 571 vLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le 629 (888)
T KOG4236|consen 571 VLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLE 629 (888)
T ss_pred hccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEE
Confidence 789999999999996 579999999997543 2334678999999999 99999875
No 65
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.81 E-value=0.0016 Score=67.48 Aligned_cols=55 Identities=25% Similarity=0.469 Sum_probs=46.0
Q ss_pred eeccCCceeeeeeeecC-CceEEEEeeccCCCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLAD-GSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
++|+|.||.||.+...+ |...|||..........+.+.+|+++|++ |||||+.++
T Consensus 24 ~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G 81 (313)
T KOG0198|consen 24 LLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYG 81 (313)
T ss_pred cccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCC
Confidence 78999999999999754 88999999865432236779999999999 999999764
No 66
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=96.81 E-value=0.0018 Score=64.92 Aligned_cols=54 Identities=35% Similarity=0.450 Sum_probs=43.6
Q ss_pred eeccCCceeeeeeeecC----CceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD----GSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~----g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|++.. ...||||.++.... ...++|.+|++++++ |+||++++
T Consensus 11 ~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 71 (266)
T cd05033 11 VIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLE 71 (266)
T ss_pred EecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEe
Confidence 78999999999999843 35799999865432 234689999999999 99999874
No 67
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.79 E-value=0.00059 Score=72.43 Aligned_cols=53 Identities=28% Similarity=0.307 Sum_probs=43.3
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeeccCCCCChHHH--HHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLSASSSQGPKQF--RTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~~~~~~~ef--~~Ei~~l~~---H~NlV~l~ 580 (581)
.+|.|.||.||+|+ .+.|..||||+++... ...+|. .+|++.|++ |||||+|.
T Consensus 17 klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf-~s~ee~~nLREvksL~kln~hpniikL~ 75 (538)
T KOG0661|consen 17 KLGDGTFGSVYLAKSKETGELVAIKKMKKKF-YSWEECMNLREVKSLRKLNPHPNIIKLK 75 (538)
T ss_pred HhcCCcceeEEEeeecCCCceeeHHHHHhhh-ccHHHHHHHHHHHHHHhcCCCCcchhhH
Confidence 68999999999999 5678899999996542 234554 689999999 99999874
No 68
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=96.78 E-value=0.0018 Score=67.37 Aligned_cols=55 Identities=22% Similarity=0.388 Sum_probs=44.7
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||+|.- .+|..||||+++... .....++.+|++++++ |||||+++
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 65 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIK 65 (338)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeec
Confidence 3789999999999985 468899999986432 2334678999999999 99999864
No 69
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=96.78 E-value=0.0015 Score=66.14 Aligned_cols=55 Identities=31% Similarity=0.407 Sum_probs=44.3
Q ss_pred EeeccCCceeeeeeee-----cCCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-----ADGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-----~~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||+|.. +++..+|+|.+.... .+..++|.+|++++++ |+|||+++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 73 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLL 73 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEE
Confidence 4789999999999985 345789999997433 2334689999999999 99999864
No 70
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=96.78 E-value=0.002 Score=64.60 Aligned_cols=54 Identities=31% Similarity=0.529 Sum_probs=45.3
Q ss_pred EeeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||+|...+...||+|.++.. ....++|.+|++++++ |+||++++
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~-~~~~~~~~~E~~~l~~l~~~~i~~~~ 67 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLY 67 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccC-ccCHHHHHHHHHHHHhCCCCCcceEE
Confidence 378999999999999877778999999643 2345789999999999 99999864
No 71
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=96.77 E-value=0.0015 Score=69.30 Aligned_cols=54 Identities=24% Similarity=0.348 Sum_probs=44.5
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||++.- .+|..||||++.... ....+++.+|+++|++ |+|||+++
T Consensus 7 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 65 (372)
T cd07853 7 PIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSAL 65 (372)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHh
Confidence 689999999999985 578899999986432 2335678999999998 99999875
No 72
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=96.77 E-value=0.0013 Score=70.15 Aligned_cols=56 Identities=20% Similarity=0.309 Sum_probs=45.4
Q ss_pred EEeeccCCceeeeeeee-cCCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYL-ADGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+..||+|+||.||++.. .++..+|||++.... ....+++.+|+++|.+ |+|||+++
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~ 67 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLY 67 (381)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeE
Confidence 34799999999999986 467899999996432 2335678999999999 99999875
No 73
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=96.75 E-value=0.0014 Score=67.06 Aligned_cols=55 Identities=15% Similarity=0.202 Sum_probs=44.7
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... +|..||+|++.... ....+.+.+|++++++ ||||++++
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~ 67 (291)
T cd05612 7 KTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLF 67 (291)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhH
Confidence 47899999999999975 67899999986432 2235678999999999 99999874
No 74
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=96.75 E-value=0.0021 Score=66.21 Aligned_cols=52 Identities=23% Similarity=0.323 Sum_probs=42.3
Q ss_pred eeccCCceeeeeeeecC---CceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD---GSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~---g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++...+ +..+|+|.++.. ....++.+|+++|++ |||||+++
T Consensus 8 ~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~ 64 (317)
T cd07867 8 KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQ 64 (317)
T ss_pred EeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEE
Confidence 68999999999999753 468999998643 224578899999999 99999864
No 75
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=96.74 E-value=0.0017 Score=66.08 Aligned_cols=55 Identities=29% Similarity=0.408 Sum_probs=44.7
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++.. .+|..||||.+.... .+....+.+|++++++ |+|||+++
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~ 66 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLA 66 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEE
Confidence 4799999999999986 578899999986432 2334568899999999 99999874
No 76
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=96.74 E-value=0.0015 Score=65.21 Aligned_cols=54 Identities=31% Similarity=0.519 Sum_probs=47.5
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|.|+||.||+|...++..+|+|.+.........++.+|++++++ |+||++++
T Consensus 13 ~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 68 (261)
T cd05148 13 KLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLF 68 (261)
T ss_pred hhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhhee
Confidence 6899999999999998889999999976655556789999999999 99999864
No 77
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=96.74 E-value=0.0005 Score=67.14 Aligned_cols=54 Identities=37% Similarity=0.432 Sum_probs=45.1
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|.||.||.|+-+ ++-.||+|++..+. .+-.+++.+||++-+. ||||.+|+
T Consensus 29 ~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY 88 (281)
T KOG0580|consen 29 PLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLY 88 (281)
T ss_pred cccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhh
Confidence 6899999999999975 45689999996542 3446789999999998 99999886
No 78
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=96.74 E-value=0.0011 Score=68.50 Aligned_cols=57 Identities=21% Similarity=0.415 Sum_probs=47.4
Q ss_pred EEeeccCCceeeeeeee-cCCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCcccccC
Q 008008 525 LRILGKGGFGTVYHGYL-ADGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
+++||+|+||+||..+- +.++..|.|+|+... ....+...+|.++|.+ ||.||.|+|
T Consensus 30 lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~y 92 (357)
T KOG0598|consen 30 LKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIY 92 (357)
T ss_pred eeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEE
Confidence 45899999999999886 457789999997543 3346778999999999 999999976
No 79
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=96.72 E-value=0.0018 Score=67.54 Aligned_cols=55 Identities=22% Similarity=0.228 Sum_probs=45.1
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... ++..||||.++.. .....+.+.+|+++|++ |||||+++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~ 84 (329)
T PTZ00263 24 ETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMM 84 (329)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEE
Confidence 47999999999999975 5789999998643 22345678999999999 99999875
No 80
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=96.72 E-value=0.0025 Score=65.38 Aligned_cols=55 Identities=27% Similarity=0.378 Sum_probs=44.8
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++... ++..||||.++.... .....+.+|++++++ |||||+++
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 69 (303)
T cd07869 11 EKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLH 69 (303)
T ss_pred eeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEE
Confidence 47899999999999975 678999999865432 234567899999999 99999874
No 81
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=96.70 E-value=0.00084 Score=73.19 Aligned_cols=54 Identities=28% Similarity=0.397 Sum_probs=46.8
Q ss_pred eeccCCceeeeeeeecC-CceEEEEeeccCCCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLAD-GSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
.+|-|.+|.||.|.|.. ...||||.|+++. ...+||..|..+|+. |||||+|++
T Consensus 274 KLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLG 330 (1157)
T KOG4278|consen 274 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLG 330 (1157)
T ss_pred ccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhh
Confidence 57999999999999964 5689999998653 357899999999999 999999974
No 82
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=96.70 E-value=0.0027 Score=65.42 Aligned_cols=55 Identities=25% Similarity=0.332 Sum_probs=44.6
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||+|... ++..||+|+++.... .....+.+|++++++ ||||++++
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 70 (309)
T cd07872 12 EKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 70 (309)
T ss_pred EEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEE
Confidence 47899999999999864 567899999875432 334578899999999 99999875
No 83
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=96.70 E-value=0.0016 Score=65.34 Aligned_cols=54 Identities=33% Similarity=0.422 Sum_probs=43.5
Q ss_pred eeccCCceeeeeeeec----CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA----DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~----~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||+|.+. .+..||||++.... ....+++.+|+++|++ |||||+++
T Consensus 6 ~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 67 (273)
T cd05074 6 MLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLI 67 (273)
T ss_pred cccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEE
Confidence 6899999999999863 35789999986432 2235679999999999 99999874
No 84
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=96.70 E-value=0.0021 Score=63.76 Aligned_cols=54 Identities=33% Similarity=0.557 Sum_probs=44.7
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC-----CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-----SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-----~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|++|.||+|... ++..|++|.+.... .+..++|.+|++++++ |+||++++
T Consensus 7 ~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 68 (258)
T cd06632 7 LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYL 68 (258)
T ss_pred eeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchhee
Confidence 6899999999999986 78899999886432 1235689999999999 99999864
No 85
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=96.70 E-value=0.0018 Score=67.60 Aligned_cols=55 Identities=24% Similarity=0.347 Sum_probs=45.3
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... ++..||||+++... ....+++.+|++++.+ |||||+++
T Consensus 7 ~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~ 67 (333)
T cd05600 7 TQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLL 67 (333)
T ss_pred EEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEE
Confidence 47999999999999975 57899999996432 2345678999999999 99999875
No 86
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=96.69 E-value=0.00047 Score=64.10 Aligned_cols=69 Identities=29% Similarity=0.436 Sum_probs=44.4
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCC-CccccccCCCccccccccCccCCCCCchHHHh
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTG-SIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVA 516 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G-~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~ 516 (581)
+.+..|++.-|.|. .+|..|+.++.|+.|||+.|+++- .+|..+.-++.|+.|+|+.|.|. -+|..+.+
T Consensus 79 ~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~ 148 (264)
T KOG0617|consen 79 PKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGK 148 (264)
T ss_pred hhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhh
Confidence 55666666666665 456677777777777777777653 35666666667777777777765 45555433
No 87
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=96.68 E-value=0.0018 Score=68.06 Aligned_cols=54 Identities=26% Similarity=0.381 Sum_probs=43.2
Q ss_pred eeccCCceeeeeeee------cCCceEEEEeeccCCC-CChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL------ADGSEVAIKMLSASSS-QGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l------~~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+|+||.||++.. .+++.||||+++.... ...+.+.+|+++|.+ |+|||+++
T Consensus 14 ~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~ 77 (343)
T cd05103 14 PLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 77 (343)
T ss_pred cccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhc
Confidence 689999999999973 4567899999975432 234678899999988 89999875
No 88
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=96.68 E-value=0.0028 Score=63.39 Aligned_cols=54 Identities=31% Similarity=0.565 Sum_probs=44.2
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCC------ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQ------GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~------~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|...+|..+|||.++..... ..+.+.+|+++|++ |+||++++
T Consensus 7 ~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 68 (265)
T cd06631 7 VLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYL 68 (265)
T ss_pred eEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEe
Confidence 68999999999999888899999988643211 13568899999999 99999864
No 89
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=96.68 E-value=0.0023 Score=64.50 Aligned_cols=54 Identities=30% Similarity=0.439 Sum_probs=44.5
Q ss_pred eeccCCceeeeeeeec-----CCceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-----DGSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-----~g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++.+. .+..+|||.++..... ..++|.+|++++++ |+||++++
T Consensus 11 ~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~ 72 (284)
T cd05038 11 QLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYK 72 (284)
T ss_pred eeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEE
Confidence 6899999999999974 3578999999755332 46789999999999 99999864
No 90
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=96.68 E-value=0.0028 Score=62.94 Aligned_cols=54 Identities=28% Similarity=0.500 Sum_probs=45.4
Q ss_pred EeeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|++|.||++...++..+|+|.++.. .....+|.+|++++.+ |||+++++
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLY 65 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEE
Confidence 378999999999999877889999998643 2345789999999999 99999874
No 91
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=96.67 E-value=0.0022 Score=64.84 Aligned_cols=55 Identities=27% Similarity=0.410 Sum_probs=44.8
Q ss_pred EeeccCCceeeeeeeecC-----CceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLAD-----GSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~-----g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||+|...+ +..|++|++...... ..+.+.+|++++++ |+||++++
T Consensus 12 ~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~ 74 (280)
T cd05043 12 DLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPIL 74 (280)
T ss_pred eeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 378999999999999865 678999998654322 25678999999998 99999864
No 92
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=96.67 E-value=0.0029 Score=64.11 Aligned_cols=55 Identities=20% Similarity=0.283 Sum_probs=45.0
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||+++.. ++..+|||+++... ....+.+.+|++++.+ |+|||+++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 66 (287)
T cd07848 7 GVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELK 66 (287)
T ss_pred EEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchh
Confidence 47899999999999975 57789999986432 2335678899999999 99999875
No 93
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=96.67 E-value=0.0016 Score=69.54 Aligned_cols=56 Identities=20% Similarity=0.301 Sum_probs=45.2
Q ss_pred EEeeccCCceeeeeeee-cCCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYL-ADGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
++.||+|+||.||++.. .++..+|+|.+.... ....+.+.+|++++++ |+|||+++
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~ 67 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLY 67 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEE
Confidence 45799999999999986 467899999986432 2234678999999999 99999885
No 94
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=96.66 E-value=0.0018 Score=64.88 Aligned_cols=54 Identities=28% Similarity=0.412 Sum_probs=43.2
Q ss_pred eeccCCceeeeeeeecC----CceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD----GSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~----g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|.+.. +..||||+++... .....+|.+|++.+++ |+|||+++
T Consensus 6 ~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 67 (273)
T cd05035 6 ILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67 (273)
T ss_pred ccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 68999999999999743 2579999987432 2234689999999998 99999865
No 95
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=96.65 E-value=0.0024 Score=63.44 Aligned_cols=52 Identities=33% Similarity=0.510 Sum_probs=44.8
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|.|++|.||++... |..||||.++.... ..+++.+|++++++ |+||++++
T Consensus 13 ~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~ 66 (256)
T cd05039 13 TIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLL 66 (256)
T ss_pred eeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeE
Confidence 7899999999999875 78899999975533 56789999999999 99999875
No 96
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=96.64 E-value=0.0024 Score=63.86 Aligned_cols=54 Identities=24% Similarity=0.390 Sum_probs=45.3
Q ss_pred EeeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++...++..+|+|.++... ...+.|.+|++++++ |+||+++.
T Consensus 12 ~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~ 67 (260)
T cd05073 12 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLH 67 (260)
T ss_pred eEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEE
Confidence 3789999999999998888889999886432 235689999999999 99999864
No 97
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=96.64 E-value=0.0017 Score=71.07 Aligned_cols=130 Identities=21% Similarity=0.307 Sum_probs=64.8
Q ss_pred eEEEEEeecCCCCcChHHH---HHHhhhhhccCCCCCCcchhhhhhhhhhhccCCCCC--CCCCCCCCcccccCccCCCC
Q 008008 367 KLNFSLCKTSNSTLPPILN---AIEIYILTDTLQEPTDQDDVNAIMDIKLSYDLGKGW--QGDPCSPMYYSWDGLNCSYN 441 (581)
Q Consensus 367 ~~~isl~~t~~s~lp~~ln---~le~~~l~~~~~~~t~~~d~~aL~~~k~~~~~~~~W--~g~pC~~~~~~W~Gv~C~~~ 441 (581)
.-++++..|.-..+|-.|. .+|.+.+..+ +..+.-.+...|-.+++.....++- .|-|-. .+
T Consensus 34 ~~WLkLnrt~L~~vPeEL~~lqkLEHLs~~HN-~L~~vhGELs~Lp~LRsv~~R~N~LKnsGiP~d--iF---------- 100 (1255)
T KOG0444|consen 34 MTWLKLNRTKLEQVPEELSRLQKLEHLSMAHN-QLISVHGELSDLPRLRSVIVRDNNLKNSGIPTD--IF---------- 100 (1255)
T ss_pred eeEEEechhhhhhChHHHHHHhhhhhhhhhhh-hhHhhhhhhccchhhHHHhhhccccccCCCCch--hc----------
Confidence 4578888887777775554 4566666554 2222222222222222211111111 111110 00
Q ss_pred CCCCCceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCcccccc-CCCccccccccCccCCCCCchHH
Q 008008 442 GYKPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLS-QLPLLRVLNLDGNKLSGSVPTSL 514 (581)
Q Consensus 442 ~~~~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~-~l~~L~~L~ls~N~l~G~iP~~l 514 (581)
....++.|+||.|+|. .+|..+..-+++-.|+||+|++. +||..+. +|+.|-.||||+|.|. .+|+.+
T Consensus 101 --~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~ 169 (1255)
T KOG0444|consen 101 --RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQI 169 (1255)
T ss_pred --ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHH
Confidence 1234566666666665 45666666666666666666665 5555443 5566666666666665 455544
No 98
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=96.61 E-value=0.0018 Score=68.84 Aligned_cols=55 Identities=24% Similarity=0.334 Sum_probs=44.8
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++.. .++..||||.+... .....+++.+|++++++ |||||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~ 67 (377)
T cd05629 7 KVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLY 67 (377)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4789999999999885 46789999998542 22335678999999999 99999875
No 99
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=96.60 E-value=0.0019 Score=68.25 Aligned_cols=55 Identities=24% Similarity=0.359 Sum_probs=44.7
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||+++.. +|+.||||+++... ....+.+.+|+++|.+ |+|||+++
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~ 67 (364)
T cd05599 7 KVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLY 67 (364)
T ss_pred EEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceE
Confidence 47999999999999964 67899999996431 2234668899999999 99999875
No 100
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=96.59 E-value=0.0021 Score=64.54 Aligned_cols=54 Identities=28% Similarity=0.428 Sum_probs=43.0
Q ss_pred eeccCCceeeeeeeecCC-c--eEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADG-S--EVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g-~--~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||+|...+. . .+|+|.++.. +....++|..|++++++ |+|||+++
T Consensus 6 ~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 66 (272)
T cd05075 6 TLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLI 66 (272)
T ss_pred ccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 689999999999998543 2 6899988643 22335789999999999 99999874
No 101
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=96.59 E-value=0.0025 Score=64.45 Aligned_cols=54 Identities=30% Similarity=0.400 Sum_probs=43.2
Q ss_pred eeccCCceeeeeeeecC------CceEEEEeeccCCCCC-hHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQG-PKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~------g~~VAVK~l~~~~~~~-~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|...+ +..||||+++....+. .++|.+|++++++ |||||+++
T Consensus 12 ~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 74 (283)
T cd05091 12 ELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLL 74 (283)
T ss_pred HhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEE
Confidence 58999999999998632 4689999997543332 3568999999998 99999874
No 102
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.58 E-value=0.0026 Score=69.28 Aligned_cols=56 Identities=32% Similarity=0.403 Sum_probs=46.7
Q ss_pred EEeeccCCceeeeeeee-cCCceEEEEeeccCCCCCh---HHHHHHHHHHhc--CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGP---KQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~---~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
++-||.|+||.||.+.- .+...||||+++.+..|.. ++...||..|.+ |||+|...
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYk 92 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYK 92 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCccccc
Confidence 34799999999999985 4567899999988777764 567899999999 99999754
No 103
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=96.57 E-value=0.0024 Score=66.93 Aligned_cols=54 Identities=24% Similarity=0.301 Sum_probs=43.9
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||++.. .++..||||++.... ....+++.+|+++|++ |+|||+++
T Consensus 22 ~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 80 (343)
T cd07878 22 PVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLL 80 (343)
T ss_pred ecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhh
Confidence 789999999999985 467899999986432 2234678899999999 99999875
No 104
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=96.57 E-value=0.0022 Score=64.43 Aligned_cols=54 Identities=30% Similarity=0.436 Sum_probs=43.4
Q ss_pred eeccCCceeeeeeeecC-C---ceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-G---SEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g---~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|.... + ..||||.++... ....++|..|++++++ ||||++++
T Consensus 11 ~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~ 71 (269)
T cd05065 11 VIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71 (269)
T ss_pred EecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEE
Confidence 78999999999999743 3 369999986542 2335789999999999 99999864
No 105
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=96.52 E-value=0.0029 Score=64.03 Aligned_cols=55 Identities=29% Similarity=0.401 Sum_probs=44.6
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||++.. .++..+|+|.+.... ....++|.+|++++++ ||||++++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 65 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFY 65 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 3689999999999985 567899999986432 2334679999999998 99999875
No 106
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=96.52 E-value=0.0037 Score=62.42 Aligned_cols=53 Identities=34% Similarity=0.583 Sum_probs=44.8
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|++|.||++...++..+|+|.+.... ...+.|.+|++++++ |+|+++++
T Consensus 13 ~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~ 67 (260)
T cd05069 13 KLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLY 67 (260)
T ss_pred eecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEE
Confidence 689999999999998877789999986543 345679999999999 99999864
No 107
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=96.52 E-value=0.0029 Score=63.60 Aligned_cols=55 Identities=25% Similarity=0.427 Sum_probs=44.2
Q ss_pred EeeccCCceeeeeeeec------CCceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA------DGSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~------~g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||+++.. +...+++|.+.....+ ..++|.+|++++++ |+|||+++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 74 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLL 74 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeE
Confidence 47899999999999964 2357999988654433 35789999999999 99999875
No 108
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=96.51 E-value=0.0033 Score=64.46 Aligned_cols=54 Identities=26% Similarity=0.371 Sum_probs=45.9
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||++.. .++..||+|.++.......+.+.+|++++.+ ||||++++
T Consensus 28 ~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~ 84 (297)
T cd06659 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMY 84 (297)
T ss_pred hcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhh
Confidence 689999999999986 4688999999976555556789999999998 99999875
No 109
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.51 E-value=0.0033 Score=66.33 Aligned_cols=55 Identities=27% Similarity=0.352 Sum_probs=44.8
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++.- ..|..||||++... .....+++.+|++++++ |||||+++
T Consensus 27 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 86 (359)
T cd07876 27 KPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLL 86 (359)
T ss_pred EEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeee
Confidence 4799999999999985 45789999998643 22345678899999998 99999875
No 110
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=96.50 E-value=0.0042 Score=65.12 Aligned_cols=55 Identities=27% Similarity=0.355 Sum_probs=46.7
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||.|+||.||+|.. .+|..||+|.+........+.+.+|++++++ ||||++++
T Consensus 11 ~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~ 68 (342)
T cd07854 11 RPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVY 68 (342)
T ss_pred EEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhH
Confidence 4789999999999986 4678999999876555566789999999999 99999864
No 111
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=96.49 E-value=0.003 Score=67.31 Aligned_cols=54 Identities=30% Similarity=0.429 Sum_probs=42.3
Q ss_pred eeccCCceeeeeeee------cCCceEEEEeeccCCCC-ChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL------ADGSEVAIKMLSASSSQ-GPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l------~~g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.+|+|+||.||++.. .++..||||+++..... ..+.+.+|++++++ |+|||+++
T Consensus 45 ~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~ 108 (374)
T cd05106 45 TLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLL 108 (374)
T ss_pred eecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEe
Confidence 789999999999873 23457999999754332 24568899999986 99999875
No 112
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=96.48 E-value=0.0034 Score=63.89 Aligned_cols=55 Identities=29% Similarity=0.416 Sum_probs=44.1
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++.. .++..||||.+.... ......+.+|++++++ |+|||+++
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 66 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 66 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeee
Confidence 4789999999999986 467899999986432 2234567899999999 99999875
No 113
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=96.47 E-value=0.0027 Score=63.79 Aligned_cols=54 Identities=22% Similarity=0.373 Sum_probs=43.4
Q ss_pred eeccCCceeeeeeeecCC----ceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADG----SEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g----~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|...+. ..||||...... .+..++|.+|++++++ ||||++++
T Consensus 13 ~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 73 (270)
T cd05056 13 CIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLI 73 (270)
T ss_pred eeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhcee
Confidence 789999999999987432 468999886543 2345689999999999 99999875
No 114
>PTZ00036 glycogen synthase kinase; Provisional
Probab=96.47 E-value=0.0038 Score=68.18 Aligned_cols=51 Identities=27% Similarity=0.410 Sum_probs=41.2
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||+|.. ..+..||||++... .....+|+++|++ |+|||+++
T Consensus 72 ~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~ 125 (440)
T PTZ00036 72 NIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLK 125 (440)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCccee
Confidence 4799999999999997 46789999988532 2334579999999 99999863
No 115
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=96.46 E-value=0.0049 Score=62.27 Aligned_cols=55 Identities=24% Similarity=0.383 Sum_probs=44.6
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|++|.||++... +|..||||+++... ....+.+.+|++++++ ||||++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 65 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 65 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchh
Confidence 36899999999999864 67899999986432 2234679999999999 99999875
No 116
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=96.45 E-value=0.00098 Score=72.81 Aligned_cols=69 Identities=33% Similarity=0.453 Sum_probs=61.9
Q ss_pred CCceeEeecCCCCCc-eecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHHH
Q 008008 445 PPKIISLNLTSEGLT-GKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLV 515 (581)
Q Consensus 445 ~~~l~~l~Ls~n~l~-G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~ 515 (581)
++++.++.+..|+|. ..||+.+..|..|+.||||+|+|. .+|..+....++.+|+||+|++. +||..++
T Consensus 77 Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lf 146 (1255)
T KOG0444|consen 77 LPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLF 146 (1255)
T ss_pred chhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHH
Confidence 467888889999984 458999999999999999999998 89999999999999999999997 8998864
No 117
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=96.45 E-value=0.0033 Score=64.07 Aligned_cols=54 Identities=24% Similarity=0.415 Sum_probs=45.9
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|.|+||.||+|+.. ++..+++|.+........++|.+|++++++ |+||++++
T Consensus 19 ~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 75 (292)
T cd06644 19 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLL 75 (292)
T ss_pred eecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeE
Confidence 6899999999999975 478999999976554556789999999998 99999865
No 118
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=96.45 E-value=0.0033 Score=67.23 Aligned_cols=54 Identities=30% Similarity=0.442 Sum_probs=45.6
Q ss_pred eeccCCceeeeeeeecC-CceEEEEeeccCCCC---ChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-GSEVAIKMLSASSSQ---GPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~~~~---~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.+|.|.||.||+++-.. |..+|+|.+...... ......+|+++|.+ |||||.|+
T Consensus 42 ~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~ 102 (382)
T KOG0032|consen 42 ELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLK 102 (382)
T ss_pred hhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEE
Confidence 78999999999999754 899999999755443 34689999999999 99999875
No 119
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=96.45 E-value=0.0039 Score=61.69 Aligned_cols=54 Identities=31% Similarity=0.516 Sum_probs=45.3
Q ss_pred eeccCCceeeeeeeecC-----CceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-----GSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-----g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|.|+||.||++...+ +..||+|+++..... ..+.+..|++++.+ |+||++++
T Consensus 6 ~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 67 (258)
T smart00219 6 KLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLL 67 (258)
T ss_pred eeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEE
Confidence 68999999999999754 378999999765444 56789999999998 99999875
No 120
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.44 E-value=0.0045 Score=63.43 Aligned_cols=55 Identities=27% Similarity=0.365 Sum_probs=46.5
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|++|.||++.. .++..||+|.+........+.+.+|+.++++ |+||++++
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 82 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYL 82 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEE
Confidence 4789999999999985 5788999999976555556778999999998 99999864
No 121
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=96.43 E-value=0.0052 Score=62.35 Aligned_cols=55 Identities=22% Similarity=0.342 Sum_probs=40.4
Q ss_pred EeeccCCceeeeeeee--cCCceEEEEeeccCC--CCChHHHHHHHHHHhc-----CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL--ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY-----YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l--~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~-----H~NlV~l~ 580 (581)
..||+|+||.||++.. .++..||||+++... ......+.+|++++++ |||||+++
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~ 70 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF 70 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEE
Confidence 3689999999999985 346789999986432 2223466677766653 99999874
No 122
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=96.43 E-value=0.0035 Score=65.64 Aligned_cols=55 Identities=24% Similarity=0.399 Sum_probs=45.4
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++... +|..||||+++... ....+.+.+|++++.+ |+||++++
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 67 (350)
T cd05573 7 KVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLY 67 (350)
T ss_pred EEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchh
Confidence 47899999999999975 68899999986432 2345678999999999 99999875
No 123
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=96.43 E-value=0.0035 Score=65.96 Aligned_cols=55 Identities=27% Similarity=0.372 Sum_probs=43.9
Q ss_pred EeeccCCceeeeeeeecC--CceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLAD--GSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~--g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||+|...+ +..||+|++... .....+++.+|++++++ |||||+++
T Consensus 36 ~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~ 97 (340)
T PTZ00426 36 RTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLY 97 (340)
T ss_pred EEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceE
Confidence 479999999999998643 358999998543 22345678999999999 99999875
No 124
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=96.42 E-value=0.0036 Score=63.72 Aligned_cols=55 Identities=29% Similarity=0.402 Sum_probs=43.9
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++.. .++..+|+|.++... ....+.+.+|+++|.+ |+||++++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~ 66 (285)
T cd05632 6 RVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLA 66 (285)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEE
Confidence 4689999999999987 467899999986432 2234567899999999 99999864
No 125
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=96.41 E-value=0.0044 Score=62.01 Aligned_cols=54 Identities=20% Similarity=0.379 Sum_probs=45.1
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++.. .++..+|+|.++.........+.+|+.++.+ ||||++++
T Consensus 16 ~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~ 72 (267)
T cd06645 16 RIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYF 72 (267)
T ss_pred HhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 689999999999986 4678999999876544455678899999998 99999875
No 126
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=96.41 E-value=0.0058 Score=62.60 Aligned_cols=55 Identities=27% Similarity=0.349 Sum_probs=44.6
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... ++..||+|.++.... .....+.+|++++++ |+||++++
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~ 70 (301)
T cd07873 12 DKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 70 (301)
T ss_pred eEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEE
Confidence 47899999999999864 578999999864432 334578899999999 99999875
No 127
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=96.40 E-value=0.004 Score=63.73 Aligned_cols=54 Identities=24% Similarity=0.348 Sum_probs=45.6
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++.. .++..||||++.....+....+.+|+.++++ |+||++++
T Consensus 27 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 83 (292)
T cd06657 27 KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMY 83 (292)
T ss_pred HcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhhee
Confidence 689999999999987 4688999999865544456679999999998 99999875
No 128
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=96.40 E-value=0.0034 Score=63.52 Aligned_cols=54 Identities=24% Similarity=0.433 Sum_probs=45.1
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|... ++..+++|.+.....+..+.|.+|++++++ ||||++++
T Consensus 12 ~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~ 68 (282)
T cd06643 12 ELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 68 (282)
T ss_pred hcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEE
Confidence 5899999999999975 467889999865544556789999999998 99999874
No 129
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=96.40 E-value=0.0057 Score=61.13 Aligned_cols=54 Identities=22% Similarity=0.346 Sum_probs=43.7
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC---CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS---QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~---~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|+. .++..||||.++.... ...+.|.+|++++++ ||||++++
T Consensus 9 ~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 68 (267)
T cd08228 9 KIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYL 68 (267)
T ss_pred eeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeee
Confidence 689999999999996 4688999998854222 223578999999999 99999875
No 130
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=96.39 E-value=0.0039 Score=66.28 Aligned_cols=56 Identities=18% Similarity=0.300 Sum_probs=44.9
Q ss_pred EEeeccCCceeeeeeee-cCCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYL-ADGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
++.||+|+||.||+++- .++..+|||.+.... ....+.+.+|+++|++ |+|||+++
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~ 67 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLY 67 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEE
Confidence 34799999999999985 457899999986421 2235678899999999 99999875
No 131
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=96.38 E-value=0.0046 Score=61.61 Aligned_cols=53 Identities=32% Similarity=0.443 Sum_probs=44.2
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++...++..+|+|.+... .....+|.+|++++++ |+||++++
T Consensus 11 ~lg~G~~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05059 11 ELGSGQFGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLY 65 (256)
T ss_pred hhccCCCceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEE
Confidence 68999999999999887778999998543 2335679999999999 99999864
No 132
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=96.38 E-value=0.0061 Score=61.54 Aligned_cols=54 Identities=24% Similarity=0.368 Sum_probs=44.5
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|.|++|.||+|.. .+|..||||++.... ....+.+.+|++++++ |+||++++
T Consensus 6 ~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~ 64 (283)
T cd07835 6 KIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLL 64 (283)
T ss_pred EecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHh
Confidence 689999999999986 478999999986443 2234678999999999 99999875
No 133
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=96.36 E-value=0.0057 Score=61.58 Aligned_cols=55 Identities=24% Similarity=0.343 Sum_probs=45.2
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|.|++|.||+|... ++..+|+|++.... ....+++.+|++++++ |+||++++
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 64 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLK 64 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeehe
Confidence 36899999999999975 57899999997653 2234678999999999 99999875
No 134
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=96.36 E-value=0.0057 Score=61.70 Aligned_cols=55 Identities=20% Similarity=0.282 Sum_probs=45.5
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|++|.||+|.. .+|..||||++.... ....+++.+|++++++ |+||++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 65 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLL 65 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCccee
Confidence 3689999999999996 468899999987543 2235789999999999 99999875
No 135
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=96.36 E-value=0.0034 Score=63.43 Aligned_cols=54 Identities=28% Similarity=0.475 Sum_probs=45.8
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|.|++|.||++... ++..+|+|..+.......+.|.+|++++++ |+||++++
T Consensus 12 ~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 68 (280)
T cd06611 12 ELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLY 68 (280)
T ss_pred HhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEE
Confidence 5899999999999974 578999999875544456789999999999 99999875
No 136
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=96.35 E-value=0.0041 Score=62.78 Aligned_cols=54 Identities=26% Similarity=0.476 Sum_probs=44.0
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||+|... ++..||+|.++... ....+++.+|++++++ ||||++++
T Consensus 11 ~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06642 11 RIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYY 68 (277)
T ss_pred HhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhh
Confidence 5899999999999864 57789999986433 2334679999999999 99999875
No 137
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=96.35 E-value=0.0034 Score=63.86 Aligned_cols=54 Identities=33% Similarity=0.508 Sum_probs=44.2
Q ss_pred eeccCCceeeeeeee------cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL------ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l------~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++.. .++..+|+|.+........+.|.+|++++++ |+||++++
T Consensus 12 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 73 (288)
T cd05093 12 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFY 73 (288)
T ss_pred ccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 689999999999985 2345689999876555556789999999999 99999874
No 138
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=96.35 E-value=0.0049 Score=62.32 Aligned_cols=55 Identities=25% Similarity=0.317 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC--CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS--QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~--~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++... ++..+|+|++..... ...+.+.+|++++++ |+||++++
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 66 (286)
T cd07846 7 GLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLI 66 (286)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHH
Confidence 47899999999999985 478999998864322 234678999999999 99999764
No 139
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=96.35 E-value=0.0032 Score=63.73 Aligned_cols=54 Identities=31% Similarity=0.500 Sum_probs=44.8
Q ss_pred eeccCCceeeeeeeec------CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA------DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~------~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++... ++..+|+|.+........++|.+|++++++ |+||++++
T Consensus 12 ~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 73 (280)
T cd05092 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFY 73 (280)
T ss_pred ccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEE
Confidence 6899999999999742 356899999876655556789999999999 99999874
No 140
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=96.35 E-value=0.0063 Score=62.43 Aligned_cols=55 Identities=25% Similarity=0.398 Sum_probs=44.9
Q ss_pred EeeccCCceeeeeeeec---CCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA---DGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~---~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|++|.||+|... ++..+|+|.+.... ....+.+.+|++++++ ||||++++
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 68 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLV 68 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceE
Confidence 36899999999999974 47899999997632 3334678899999999 99999875
No 141
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.34 E-value=0.0041 Score=64.87 Aligned_cols=55 Identities=20% Similarity=0.171 Sum_probs=44.9
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... +|..+|+|.++.... ...++|.+|+++|++ |||||+++
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 69 (331)
T cd06649 11 SELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 69 (331)
T ss_pred EeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEE
Confidence 47899999999999975 578899999865422 224679999999999 99999875
No 142
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=96.34 E-value=0.0054 Score=61.94 Aligned_cols=54 Identities=24% Similarity=0.455 Sum_probs=44.0
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||+|.. .++..+|||...... ....++|.+|++++++ |+|||+++
T Consensus 11 ~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 68 (277)
T cd06641 11 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 68 (277)
T ss_pred eEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 689999999999986 467899999886432 2334679999999999 99999864
No 143
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=96.32 E-value=0.0043 Score=64.93 Aligned_cols=55 Identities=20% Similarity=0.212 Sum_probs=44.6
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++... ++..+|+|.++.... ...++|.+|++++++ |+|||+++
T Consensus 11 ~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 69 (333)
T cd06650 11 SELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFY 69 (333)
T ss_pred ccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCccccee
Confidence 37899999999999975 577899998865422 224679999999999 99999875
No 144
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=96.31 E-value=0.0058 Score=62.05 Aligned_cols=55 Identities=27% Similarity=0.387 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|++|.||+|... ++..||||.+...... ....+.+|++++++ |+||++++
T Consensus 11 ~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 69 (291)
T cd07844 11 DKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLH 69 (291)
T ss_pred EEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEE
Confidence 37899999999999975 6789999998654322 23567899999999 99999864
No 145
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.31 E-value=0.0061 Score=62.45 Aligned_cols=55 Identities=25% Similarity=0.365 Sum_probs=46.4
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|++|.||+|.. .++..||+|.+........+.+.+|++++++ |+||++++
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~ 83 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYL 83 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEE
Confidence 4789999999999985 5678999999976555556789999999988 99999875
No 146
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=96.31 E-value=0.0058 Score=63.83 Aligned_cols=55 Identities=22% Similarity=0.317 Sum_probs=45.0
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|++|.||+|.. .+|..||||+++... ......+..|++++++ |+|||+++
T Consensus 11 ~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 69 (336)
T cd07849 11 SYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGIL 69 (336)
T ss_pred EEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchh
Confidence 4789999999999985 568899999996432 2345678899999999 99999874
No 147
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=96.30 E-value=0.0066 Score=62.22 Aligned_cols=55 Identities=25% Similarity=0.351 Sum_probs=46.6
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|.|++|.||+|.- .+|..|++|.+.....+..+.+.+|++++++ |+||++++
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 82 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFL 82 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeee
Confidence 4789999999999984 5788999999976555556788999999998 99999875
No 148
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=96.30 E-value=0.0035 Score=45.20 Aligned_cols=36 Identities=42% Similarity=0.718 Sum_probs=31.7
Q ss_pred ceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCC
Q 008008 447 KIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLT 483 (581)
Q Consensus 447 ~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~ 483 (581)
.++.|+|++|+++ .+|+.+.+|+.|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 5789999999998 68888999999999999999987
No 149
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=96.29 E-value=0.0061 Score=62.32 Aligned_cols=55 Identities=27% Similarity=0.360 Sum_probs=45.6
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|.|+||.||++.. .++..+|+|.+........+.+.+|+.++++ ||||++++
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~ 82 (293)
T cd06647 25 EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYL 82 (293)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehh
Confidence 4789999999999985 4678899999865544456789999999998 99999865
No 150
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=96.29 E-value=0.0045 Score=62.98 Aligned_cols=54 Identities=28% Similarity=0.417 Sum_probs=42.2
Q ss_pred eeccCCceeeeeeeec------CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA------DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~------~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|... ....+++|.+..... ...++|.+|++++++ |||||+++
T Consensus 7 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 69 (290)
T cd05045 7 TLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLY 69 (290)
T ss_pred cccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEE
Confidence 6899999999999852 235789998864432 234679999999999 99999864
No 151
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=96.28 E-value=0.0051 Score=64.74 Aligned_cols=55 Identities=29% Similarity=0.320 Sum_probs=44.1
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++.- ..+..||||+++... ....+.+.+|+.++++ |||||+++
T Consensus 23 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 82 (355)
T cd07874 23 KPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82 (355)
T ss_pred EEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhcee
Confidence 4799999999999985 357899999996432 2234678899999998 99999875
No 152
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=96.28 E-value=0.0053 Score=61.08 Aligned_cols=55 Identities=20% Similarity=0.287 Sum_probs=45.3
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|.|+||.||++... ++..+|+|.+.... ....+.+.+|++++++ ||||++++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 66 (258)
T cd05578 6 RVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLW 66 (258)
T ss_pred EEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHH
Confidence 37899999999999975 57899999986432 2346789999999999 99999864
No 153
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=96.27 E-value=0.0073 Score=60.95 Aligned_cols=55 Identities=27% Similarity=0.417 Sum_probs=45.3
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|.|++|.||+|+.. +|..||||.++..... ..+.+.+|++++++ |+||++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 64 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLH 64 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeee
Confidence 47899999999999974 6889999999755433 34678899999999 99999875
No 154
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=96.27 E-value=0.0051 Score=61.56 Aligned_cols=55 Identities=27% Similarity=0.558 Sum_probs=43.2
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC--C---CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--S---QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~---~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++.. .+|..||||.+.... . +..+.+.+|++++++ |+||++++
T Consensus 8 ~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 70 (265)
T cd06652 8 KLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYY 70 (265)
T ss_pred eEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence 3789999999999986 457899999885321 1 123578899999999 99999864
No 155
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=96.26 E-value=0.0067 Score=61.82 Aligned_cols=54 Identities=24% Similarity=0.276 Sum_probs=43.8
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCC-----ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQ-----GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~-----~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|++|.||+|... +|..||||++...... ..+.+..|++++++ |+||++++
T Consensus 7 ~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 68 (298)
T cd07841 7 KLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLL 68 (298)
T ss_pred eeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhh
Confidence 6899999999999964 6889999999754322 23567889999998 99999875
No 156
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=96.26 E-value=0.0052 Score=61.41 Aligned_cols=54 Identities=26% Similarity=0.417 Sum_probs=44.1
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC---CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS---QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~---~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|++|.||++.. .++..+|||.+..... ...++|.+|++++++ |+||++++
T Consensus 9 ~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 68 (267)
T cd08229 9 KIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 68 (267)
T ss_pred hhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhh
Confidence 689999999999995 5788999998864322 234689999999999 99999865
No 157
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.25 E-value=0.004 Score=63.06 Aligned_cols=54 Identities=24% Similarity=0.383 Sum_probs=44.3
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||++... +|..+|+|.++... ....++|.+|++++.+ |+||++++
T Consensus 8 ~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 65 (286)
T cd06622 8 ELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFY 65 (286)
T ss_pred hhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhh
Confidence 6899999999999975 67899999886432 2224689999999999 99999875
No 158
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.25 E-value=0.0064 Score=61.66 Aligned_cols=54 Identities=24% Similarity=0.262 Sum_probs=44.4
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||++... +|..+|+|.+.... ....++|.+|++++++ ||||++++
T Consensus 12 ~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 69 (284)
T cd06620 12 DLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFY 69 (284)
T ss_pred HcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEe
Confidence 6899999999999864 67899999886443 2335789999999998 99999875
No 159
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=96.25 E-value=0.0056 Score=61.40 Aligned_cols=55 Identities=29% Similarity=0.454 Sum_probs=43.0
Q ss_pred EeeccCCceeeeeeeec----CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA----DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~----~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||+|... .+..+|+|.++.... ...+.|.+|++++.+ ||||++++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 71 (267)
T cd05066 10 KVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLE 71 (267)
T ss_pred eeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 37899999999999863 234799999865432 234689999999998 99999874
No 160
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=96.25 E-value=0.007 Score=61.06 Aligned_cols=55 Identities=25% Similarity=0.309 Sum_probs=44.6
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|++|.||++... +|..||+|++.... ....+.|.+|++++++ |+||++++
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 66 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLI 66 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeee
Confidence 36899999999999975 58899999986432 2234678999999999 99999864
No 161
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=96.25 E-value=0.0065 Score=61.29 Aligned_cols=55 Identities=22% Similarity=0.330 Sum_probs=42.1
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC-CChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-QGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
..||+|+||.||++... +|..||+|+++.... ....++..|+..+.+ |+|||+++
T Consensus 7 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~ 66 (283)
T cd06617 7 EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFY 66 (283)
T ss_pred EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeee
Confidence 36899999999999974 688999999875432 334567777776544 99999865
No 162
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=96.25 E-value=0.005 Score=62.32 Aligned_cols=55 Identities=27% Similarity=0.456 Sum_probs=43.5
Q ss_pred EeeccCCceeeeeeee-----cCCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-----ADGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-----~~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||.+.. .++..||+|.++.... +..+.|.+|+++|++ ||||++++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 72 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYK 72 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 4789999999977543 4577899999865432 345789999999999 99999864
No 163
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=96.24 E-value=0.0053 Score=62.27 Aligned_cols=55 Identities=29% Similarity=0.419 Sum_probs=44.4
Q ss_pred EeeccCCceeeeeeee-----cCCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-----ADGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-----~~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||.+++ .++..||+|.++... ....+.|.+|++++++ |+||++++
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 72 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYK 72 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeee
Confidence 4689999999999875 346789999987543 2335689999999999 99999864
No 164
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=96.24 E-value=0.0076 Score=60.07 Aligned_cols=54 Identities=26% Similarity=0.407 Sum_probs=44.5
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||+|... +|..+|+|.++... ....+.+.+|++++++ |+||++++
T Consensus 9 ~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~ 68 (267)
T cd08224 9 KIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYL 68 (267)
T ss_pred eeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeee
Confidence 6899999999999986 78899999886321 2235689999999999 99998765
No 165
>PHA03212 serine/threonine kinase US3; Provisional
Probab=96.24 E-value=0.0052 Score=66.00 Aligned_cols=50 Identities=16% Similarity=0.088 Sum_probs=41.6
Q ss_pred EEeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+..||+|+||.||++.- ..+..||+|... .+.+.+|+++|++ |||||+++
T Consensus 97 ~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~ 149 (391)
T PHA03212 97 LETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLK 149 (391)
T ss_pred EEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEe
Confidence 35799999999999985 467899999753 2357899999999 99999875
No 166
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=96.24 E-value=0.0051 Score=64.25 Aligned_cols=55 Identities=22% Similarity=0.364 Sum_probs=44.1
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++... ++..||||.++.. .....+.|.+|+.++.+ |+||++++
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 67 (331)
T cd05597 7 KVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLH 67 (331)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceE
Confidence 47899999999999964 5789999998642 22234668899999988 99999875
No 167
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=96.22 E-value=0.0057 Score=64.27 Aligned_cols=55 Identities=25% Similarity=0.332 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++.. .+|..||+|+++... ....+.+.+|++++.+ |+|||+++
T Consensus 23 ~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~ 82 (345)
T cd07877 23 SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 82 (345)
T ss_pred EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCccccee
Confidence 4799999999999985 578899999996432 2234678899999998 99999864
No 168
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=96.22 E-value=0.0077 Score=63.15 Aligned_cols=55 Identities=29% Similarity=0.361 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||+|.. .+|..||||+++.. .....+.+.+|++++++ |+||++++
T Consensus 21 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~ 80 (342)
T cd07879 21 KQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLL 80 (342)
T ss_pred EEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchh
Confidence 4799999999999995 56889999998642 22234678899999998 99999875
No 169
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=96.22 E-value=0.0071 Score=60.16 Aligned_cols=54 Identities=26% Similarity=0.450 Sum_probs=45.3
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCC--ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQ--GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~--~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||+|... ++..+++|.++..... ..+++.+|++++++ |+||++++
T Consensus 7 ~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~ 65 (264)
T cd06626 7 KIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY 65 (264)
T ss_pred EeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhhee
Confidence 6899999999999864 6789999998754332 46789999999999 99999875
No 170
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=96.21 E-value=0.0061 Score=60.99 Aligned_cols=53 Identities=28% Similarity=0.417 Sum_probs=44.7
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||++... .+..||+|.++.. ....++|.+|++++.+ |+||++++
T Consensus 13 ~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~ 68 (263)
T cd05052 13 KLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLL 68 (263)
T ss_pred ecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheE
Confidence 6899999999999975 4778999998643 3346789999999999 99999875
No 171
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=96.20 E-value=0.0075 Score=59.90 Aligned_cols=55 Identities=22% Similarity=0.416 Sum_probs=46.7
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|++|.||++... ++..+++|.+........+++.+|++++++ ||||++++
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 66 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYF 66 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceE
Confidence 36899999999999974 567899999976555567889999999999 99999875
No 172
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=96.20 E-value=0.0074 Score=63.80 Aligned_cols=55 Identities=29% Similarity=0.297 Sum_probs=44.3
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++.- ..+..||||++.... ....+++.+|+.++++ ||||++++
T Consensus 30 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~ 89 (364)
T cd07875 30 KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89 (364)
T ss_pred EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccc
Confidence 4799999999999985 457889999996432 2335678899999998 99999875
No 173
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=96.19 E-value=0.0071 Score=59.49 Aligned_cols=55 Identities=25% Similarity=0.496 Sum_probs=45.9
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC--CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS--QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~--~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|++|.||+|... ++..|++|+++.... ...+++.+|++++++ |+||++++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY 65 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEE
Confidence 36899999999999976 688999999865432 346789999999999 99999864
No 174
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=96.19 E-value=0.0082 Score=61.03 Aligned_cols=55 Identities=22% Similarity=0.294 Sum_probs=44.1
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
+.+|+|+||.||++... ++..||||.++... ....+++.+|++++++ |+||++++
T Consensus 7 ~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~ 67 (295)
T cd07837 7 EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLL 67 (295)
T ss_pred eEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCcccee
Confidence 37899999999999974 68899999886432 2234678999999988 69999875
No 175
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=96.18 E-value=0.0087 Score=61.03 Aligned_cols=54 Identities=22% Similarity=0.348 Sum_probs=44.2
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|... +|..||||+++... ......+.+|++++++ ||||++++
T Consensus 14 ~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~ 72 (302)
T cd07864 14 QIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLK 72 (302)
T ss_pred eecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeee
Confidence 7899999999999985 57899999996442 2234578899999999 99999864
No 176
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=96.18 E-value=0.0062 Score=62.62 Aligned_cols=54 Identities=28% Similarity=0.427 Sum_probs=44.6
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC-CC-hHHHHHHHHHHhc--CCC-ccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS-QG-PKQFRTEVELIDY--YKN-LSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~-~~-~~ef~~Ei~~l~~--H~N-lV~l~ 580 (581)
.+|+|.+|.||+|+- .+|..||+|+++.... .| ...-.+|+.+|.+ |+| ||.|+
T Consensus 18 klGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~ 77 (323)
T KOG0594|consen 18 KLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLH 77 (323)
T ss_pred HhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEE
Confidence 589999999999995 5788999999975544 23 4556899999999 999 99874
No 177
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=96.17 E-value=0.0043 Score=62.98 Aligned_cols=54 Identities=26% Similarity=0.407 Sum_probs=43.4
Q ss_pred eeccCCceeeeeeeec------CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA------DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~------~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++... ++..+|+|.+.... .+..++|.+|++++++ |||||+++
T Consensus 12 ~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~ 74 (288)
T cd05050 12 DIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLL 74 (288)
T ss_pred cccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEE
Confidence 6899999999999863 35689999986432 2335679999999999 99999864
No 178
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=96.17 E-value=0.0057 Score=61.37 Aligned_cols=54 Identities=26% Similarity=0.457 Sum_probs=42.3
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC---C-------ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS---Q-------GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~---~-------~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|.|++|.||+|.. .+|..+|||.++.... + ..+.+.+|++++++ |+||++++
T Consensus 8 ~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 74 (272)
T cd06629 8 LIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYL 74 (272)
T ss_pred eecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEE
Confidence 689999999999985 4688999998753211 1 12468899999999 99999875
No 179
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=96.17 E-value=0.0083 Score=60.12 Aligned_cols=53 Identities=25% Similarity=0.608 Sum_probs=43.4
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.+|+|+||.||+|... ++..||+|.+... .....++..|++++.+ |+||++++
T Consensus 13 ~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~ 69 (272)
T cd06637 13 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYY 69 (272)
T ss_pred heeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEe
Confidence 5899999999999974 5788999998643 3445788999998887 99999864
No 180
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=96.17 E-value=0.0069 Score=64.57 Aligned_cols=54 Identities=24% Similarity=0.333 Sum_probs=43.3
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCC---CC-----------ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASS---SQ-----------GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~---~~-----------~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|.||.|-+|+- .++..||||.+.... .+ ..+...+||.+|++ |+|||+|+
T Consensus 104 eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 104 EIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred hhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 689999999999884 578899999985321 11 12578899999999 99999986
No 181
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=96.16 E-value=0.005 Score=63.01 Aligned_cols=54 Identities=24% Similarity=0.331 Sum_probs=45.3
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||++.. .++..||||++........+.+.+|+.++.+ |+||++++
T Consensus 29 ~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~ 85 (292)
T cd06658 29 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMY 85 (292)
T ss_pred cccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 689999999999986 4578999999866554556779999999998 99999864
No 182
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=96.15 E-value=0.0058 Score=61.01 Aligned_cols=54 Identities=22% Similarity=0.361 Sum_probs=43.9
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC----C--ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS----Q--GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~----~--~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||++.. .++..+|+|.+..... + ..+++..|++++++ |+|||+++
T Consensus 7 ~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 69 (268)
T cd06630 7 QLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRML 69 (268)
T ss_pred eecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhh
Confidence 689999999999985 6688999999864321 1 24678999999999 99999875
No 183
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=96.14 E-value=0.0087 Score=60.58 Aligned_cols=55 Identities=27% Similarity=0.359 Sum_probs=41.0
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC--CChHHHHHHHHHHhc-----CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS--QGPKQFRTEVELIDY-----YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~--~~~~ef~~Ei~~l~~-----H~NlV~l~ 580 (581)
+.||+|+||.||++... +|..||+|.++.... .....+.+|++++++ ||||++++
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~ 68 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLM 68 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeee
Confidence 36899999999999864 678999999865322 223456677766653 99999875
No 184
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=96.14 E-value=0.0027 Score=66.28 Aligned_cols=60 Identities=38% Similarity=0.607 Sum_probs=49.6
Q ss_pred CCceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCC
Q 008008 445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 445 ~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~ 507 (581)
.+++..|||..|.+. .+|.+++.|.+|+.||+|+|.++ .+|.+++++ .|+.|-+.+|.+.
T Consensus 251 L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlr 310 (565)
T KOG0472|consen 251 LNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLR 310 (565)
T ss_pred cccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchH
Confidence 467888888888887 67888888888888888888888 678888888 8888888888764
No 185
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=96.14 E-value=0.0082 Score=70.46 Aligned_cols=55 Identities=33% Similarity=0.552 Sum_probs=44.8
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCCC---ChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQ---GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~---~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||+|... .|..||||+++..... ..++|.+|++++++ |||||+++
T Consensus 8 ~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~ 68 (932)
T PRK13184 8 RLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVY 68 (932)
T ss_pred EEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEE
Confidence 47899999999999864 5789999999653222 24579999999999 99999875
No 186
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=96.14 E-value=0.0077 Score=63.21 Aligned_cols=55 Identities=27% Similarity=0.327 Sum_probs=44.2
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++.. .+|..||||++.... ....+++.+|+++|++ |+|||+++
T Consensus 21 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 80 (343)
T cd07880 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLL 80 (343)
T ss_pred EEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccee
Confidence 4789999999999985 578899999985422 2234578899999999 99999874
No 187
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=96.12 E-value=0.0057 Score=63.63 Aligned_cols=55 Identities=22% Similarity=0.309 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++.. .+|..+|||.++... ....+.+.+|++++++ |+||++++
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~ 67 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQ 67 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCccee
Confidence 4789999999999986 467899999997432 2345678899999988 99999875
No 188
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=96.11 E-value=0.007 Score=64.40 Aligned_cols=55 Identities=20% Similarity=0.276 Sum_probs=44.2
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||+++.. ++..+|+|.++.. .....+.|.+|++++++ |||||+++
T Consensus 49 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~ 109 (370)
T cd05596 49 KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLH 109 (370)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEE
Confidence 47999999999999864 5789999998642 22334568899999998 99999875
No 189
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.11 E-value=0.0069 Score=64.13 Aligned_cols=55 Identities=22% Similarity=0.335 Sum_probs=46.2
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCC-hHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQG-PKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~-~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||.|..+.||+|+. +.++.||||+++....+. .++...|++.|+. |||||+++
T Consensus 32 e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~ 90 (516)
T KOG0582|consen 32 EVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYH 90 (516)
T ss_pred EEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEE
Confidence 3799999999999984 677999999997554443 5889999999998 99999864
No 190
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=96.09 E-value=0.0068 Score=60.73 Aligned_cols=54 Identities=28% Similarity=0.522 Sum_probs=42.9
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC-----CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS-----QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~-----~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++.. ..+..+|+|++..... +..+.+.+|++++++ ||||++++
T Consensus 9 ~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 70 (266)
T cd06651 9 LLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYY 70 (266)
T ss_pred eecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEE
Confidence 689999999999986 4578999998853321 223568899999999 99999864
No 191
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=96.08 E-value=0.0053 Score=64.39 Aligned_cols=54 Identities=28% Similarity=0.361 Sum_probs=42.0
Q ss_pred eeccCCceeeeeeeec------CCceEEEEeeccCCCC-ChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA------DGSEVAIKMLSASSSQ-GPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~------~g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+|+||.||+|... .++.||+|+++....+ ..+.+..|++++.+ |+|||+++
T Consensus 14 ~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~ 77 (337)
T cd05054 14 PLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLL 77 (337)
T ss_pred ccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhhee
Confidence 7899999999999742 2468999999754322 24567889999888 99999875
No 192
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=96.08 E-value=0.0082 Score=59.39 Aligned_cols=54 Identities=22% Similarity=0.327 Sum_probs=44.7
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||++... ++..+++|.+... .....+++.+|++++++ ||||++++
T Consensus 7 ~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 65 (256)
T cd08529 7 KIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYY 65 (256)
T ss_pred EecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehhe
Confidence 6899999999999974 6789999998643 23345789999999999 99999865
No 193
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=96.08 E-value=0.011 Score=59.77 Aligned_cols=55 Identities=27% Similarity=0.390 Sum_probs=44.8
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|++|.||+|... ++..||||.++... ....+++.+|++++.+ |+||++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 65 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQ 65 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeE
Confidence 36899999999999974 68899999986432 2234678999999999 99999875
No 194
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=96.07 E-value=0.01 Score=59.20 Aligned_cols=54 Identities=26% Similarity=0.483 Sum_probs=42.8
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCCC---------hHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQG---------PKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~---------~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||+|.. .++..+|+|.+....... .+.+.+|++++++ ||||++++
T Consensus 7 ~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 72 (267)
T cd06628 7 LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYL 72 (267)
T ss_pred eeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence 689999999999986 457899999886432211 2568899999999 99999875
No 195
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=96.07 E-value=0.01 Score=60.99 Aligned_cols=55 Identities=31% Similarity=0.349 Sum_probs=44.4
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCCC---ChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQ---GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~---~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||+|... +|..||+|.+...... ..+++.+|++++++ ||||++++
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~ 81 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYK 81 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 37899999999999974 6789999998643322 23578999999999 99999864
No 196
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=96.06 E-value=0.0084 Score=60.99 Aligned_cols=55 Identities=24% Similarity=0.312 Sum_probs=46.0
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|++|.||++.. .++..+++|+++.......+.+.+|+.++++ |+||++++
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~ 82 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMY 82 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEE
Confidence 3799999999999985 4678999999875544556779999999998 99999875
No 197
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=96.05 E-value=0.0076 Score=59.63 Aligned_cols=52 Identities=25% Similarity=0.505 Sum_probs=44.5
Q ss_pred eeccCCceeeeeeeecC-CceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-GSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||++...+ +..+++|.++.... .++|.+|++++++ |+||++++
T Consensus 10 ~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~ 64 (256)
T cd06612 10 KLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYY 64 (256)
T ss_pred hhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeee
Confidence 68999999999999865 78999999865422 6789999999999 99999875
No 198
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=96.05 E-value=0.0045 Score=64.56 Aligned_cols=78 Identities=27% Similarity=0.496 Sum_probs=62.7
Q ss_pred ccCCCCCCC------CCceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccC-ccCCC
Q 008008 436 LNCSYNGYK------PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDG-NKLSG 508 (581)
Q Consensus 436 v~C~~~~~~------~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~-N~l~G 508 (581)
|.|+..+.. |+..+.|+|..|+++-.-|..|+.+++|+.||||+|+++-.=|..+..+.+|..|-+.+ |+++
T Consensus 51 VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~- 129 (498)
T KOG4237|consen 51 VDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT- 129 (498)
T ss_pred EEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-
Confidence 778876642 66789999999999844445799999999999999999977788888888877776665 7887
Q ss_pred CCchHH
Q 008008 509 SVPTSL 514 (581)
Q Consensus 509 ~iP~~l 514 (581)
.+|...
T Consensus 130 ~l~k~~ 135 (498)
T KOG4237|consen 130 DLPKGA 135 (498)
T ss_pred hhhhhH
Confidence 677664
No 199
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=96.04 E-value=0.0092 Score=59.28 Aligned_cols=55 Identities=24% Similarity=0.351 Sum_probs=46.0
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|++|.||++... ++..++||++..... ...++|.+|++.+.+ |+||++++
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCY 65 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence 37899999999999986 488999999875543 346789999999998 99999864
No 200
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=96.04 E-value=0.0087 Score=60.18 Aligned_cols=54 Identities=24% Similarity=0.464 Sum_probs=44.5
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|.|++|.||+|... ++..+|+|.+.... .....++.+|++++++ |+||++++
T Consensus 8 ~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 65 (274)
T cd06609 8 CIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYY 65 (274)
T ss_pred hhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeee
Confidence 6899999999999974 67899999986443 3345789999999999 99999864
No 201
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=96.03 E-value=0.0096 Score=62.22 Aligned_cols=55 Identities=22% Similarity=0.356 Sum_probs=44.4
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||++.- .++..||||+++.. .....+++.+|++++++ |+||++++
T Consensus 11 ~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~ 70 (337)
T cd07858 11 KPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIK 70 (337)
T ss_pred EEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchH
Confidence 3789999999999985 46789999998643 23345678899999998 99999764
No 202
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=96.03 E-value=0.0095 Score=60.64 Aligned_cols=55 Identities=20% Similarity=0.323 Sum_probs=44.8
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|++|.||+|... +|..||+|++.... ....+.+.+|++++++ |+||++++
T Consensus 8 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 67 (294)
T PLN00009 8 EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ 67 (294)
T ss_pred EEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEE
Confidence 37899999999999974 68899999986432 2334678999999999 99999875
No 203
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=96.03 E-value=0.0063 Score=62.00 Aligned_cols=54 Identities=31% Similarity=0.473 Sum_probs=44.1
Q ss_pred eeccCCceeeeeeeec------CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA------DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~------~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+++.. ++..+++|+++.......+.|.+|++++++ |+||++++
T Consensus 12 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 73 (291)
T cd05094 12 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFY 73 (291)
T ss_pred eecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEE
Confidence 7899999999999742 345689999876554456789999999999 99999864
No 204
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=96.03 E-value=0.011 Score=60.10 Aligned_cols=55 Identities=29% Similarity=0.396 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||+|.. .+|..+|+|++..... +....+.+|++++++ |+||++++
T Consensus 11 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~ 69 (291)
T cd07870 11 EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLH 69 (291)
T ss_pred EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEE
Confidence 4789999999999986 4678999999865433 334578899999998 99999764
No 205
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=96.02 E-value=0.0092 Score=59.07 Aligned_cols=55 Identities=22% Similarity=0.407 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||++... +|..+|+|.+.... ....+.+.+|++++++ |+||++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~ 65 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFF 65 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhh
Confidence 36899999999999975 57889999986432 2345678899999999 99999875
No 206
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=96.02 E-value=0.0086 Score=62.38 Aligned_cols=54 Identities=24% Similarity=0.308 Sum_probs=42.3
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCCC--------------hHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQG--------------PKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~--------------~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||.|+||.||++... ++..||||.++...... ...+.+|++++++ |+|||+++
T Consensus 16 ~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 16 HLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred cccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 6899999999999854 68899999886432111 1257899999999 99999865
No 207
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=96.02 E-value=0.0073 Score=62.03 Aligned_cols=55 Identities=33% Similarity=0.593 Sum_probs=42.6
Q ss_pred EeeccCCceeeeeeee-cCCc----eEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGS----EVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~----~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||+|.. .+|. .||+|.+...... ...+|.+|++++++ |||||+++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~ 75 (303)
T cd05110 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 75 (303)
T ss_pred cccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEE
Confidence 3799999999999986 3443 5789988654322 23578999999999 99999875
No 208
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=96.02 E-value=0.0077 Score=62.06 Aligned_cols=55 Identities=20% Similarity=0.172 Sum_probs=43.6
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++... ++..+|+|.++.... ...+++.+|++++.+ |||||+++
T Consensus 7 ~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 65 (308)
T cd06615 7 GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFY 65 (308)
T ss_pred eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 46899999999999864 577899998864322 223568899999999 99999875
No 209
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=96.01 E-value=0.0099 Score=60.40 Aligned_cols=56 Identities=27% Similarity=0.322 Sum_probs=45.7
Q ss_pred EEeeccCCceeeeeeeec-CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
...+|.|++|.||++... ++..+|+|.+..... ....++.+|++++++ |||||+++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 65 (287)
T cd06621 6 LSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYY 65 (287)
T ss_pred EEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeee
Confidence 347899999999999984 578899999864432 345779999999999 99999874
No 210
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=96.01 E-value=0.0067 Score=61.27 Aligned_cols=54 Identities=33% Similarity=0.550 Sum_probs=43.0
Q ss_pred eeccCCceeeeeeeec-CCc----eEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGS----EVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~----~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||+|... +|. .+|+|.+..... +...++.+|++++++ |+||++++
T Consensus 14 ~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 75 (279)
T cd05057 14 VLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLL 75 (279)
T ss_pred eecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 6899999999999974 333 589998865433 234689999999999 99999875
No 211
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=96.00 E-value=0.0055 Score=67.89 Aligned_cols=40 Identities=23% Similarity=0.408 Sum_probs=29.0
Q ss_pred EeeccCCceeeeeeee-----------------cCCceEEEEeeccCCCCChHHHHH
Q 008008 526 RILGKGGFGTVYHGYL-----------------ADGSEVAIKMLSASSSQGPKQFRT 565 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-----------------~~g~~VAVK~l~~~~~~~~~ef~~ 565 (581)
+.||+|+||.||+|.+ .+++.||||+++.......++|.+
T Consensus 151 ~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~ 207 (507)
T PLN03224 151 DKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLK 207 (507)
T ss_pred eEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHh
Confidence 4799999999999974 235689999997654433445544
No 212
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=96.00 E-value=0.0077 Score=60.27 Aligned_cols=54 Identities=30% Similarity=0.523 Sum_probs=43.0
Q ss_pred eeccCCceeeeeeeec-CC---ceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DG---SEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g---~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|... ++ ..+|+|.++... ....++|..|++++++ |+||+++.
T Consensus 12 ~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 72 (268)
T cd05063 12 VIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLE 72 (268)
T ss_pred EecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEE
Confidence 7899999999999974 23 379999986543 2235679999999998 99998864
No 213
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=95.99 E-value=0.0086 Score=60.68 Aligned_cols=54 Identities=20% Similarity=0.404 Sum_probs=43.8
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC-CChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS-QGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+|+||.||++.. .++..+|+|.+..... ....++..|++++.+ |+|||+++
T Consensus 11 ~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~ 69 (288)
T cd06616 11 EIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFY 69 (288)
T ss_pred HhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeee
Confidence 589999999999886 4578999999865432 235678999999888 89999875
No 214
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=95.99 E-value=0.008 Score=60.88 Aligned_cols=54 Identities=28% Similarity=0.384 Sum_probs=41.6
Q ss_pred eeccCCceeeeeeeec-CCc----eEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGS----EVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~----~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||+|.+. ++. .+++|.+..... +..+++..|+..+++ |+|||+++
T Consensus 14 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~ 75 (279)
T cd05111 14 LLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLL 75 (279)
T ss_pred ccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEE
Confidence 7899999999999973 444 478888754332 234678889989988 99999875
No 215
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=95.98 E-value=0.0076 Score=60.84 Aligned_cols=54 Identities=24% Similarity=0.456 Sum_probs=44.4
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|... ++..||||.+.... ....++|.+|++++++ |+||++++
T Consensus 11 ~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06640 11 RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 68 (277)
T ss_pred hcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 6899999999999874 57899999986432 2345789999999998 99999874
No 216
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=95.98 E-value=0.011 Score=57.83 Aligned_cols=54 Identities=33% Similarity=0.598 Sum_probs=46.5
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||++... ++..+++|++........+++.+|++++++ |+|+++++
T Consensus 7 ~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 63 (253)
T cd05122 7 KIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYY 63 (253)
T ss_pred eeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEE
Confidence 6899999999999985 678999999976554566889999999999 99998764
No 217
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=95.98 E-value=0.007 Score=61.91 Aligned_cols=54 Identities=30% Similarity=0.498 Sum_probs=42.4
Q ss_pred eeccCCceeeeeeeecC-Cc--eEEEEeeccC-CCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-GS--EVAIKMLSAS-SSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g~--~VAVK~l~~~-~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+|+||.||+|...+ +. .+++|.++.. .....+.|.+|++++++ |||||+++
T Consensus 9 ~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 69 (297)
T cd05089 9 VIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLL 69 (297)
T ss_pred eecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheE
Confidence 78999999999999753 33 5789888643 22345689999999987 99999874
No 218
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=95.97 E-value=0.008 Score=60.70 Aligned_cols=54 Identities=37% Similarity=0.568 Sum_probs=42.7
Q ss_pred eeccCCceeeeeeeecCC------ceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADG------SEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g------~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||+|..... ..||+|.++.... ...++|.+|++++++ ||||++++
T Consensus 12 ~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 74 (283)
T cd05048 12 ELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLL 74 (283)
T ss_pred cccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEE
Confidence 689999999999986432 4799999864432 234679999999998 99999865
No 219
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=95.96 E-value=0.0089 Score=63.67 Aligned_cols=55 Identities=20% Similarity=0.347 Sum_probs=43.9
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... ++..+|+|.++.. .....+.+.+|+++++. |||||+++
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~ 109 (370)
T cd05621 49 KVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 109 (370)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEE
Confidence 47999999999999975 5778999998532 22234568899999998 99999875
No 220
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=95.96 E-value=0.0073 Score=60.98 Aligned_cols=55 Identities=35% Similarity=0.526 Sum_probs=44.1
Q ss_pred EeeccCCceeeeeeeecC------CceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLAD------GSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~------g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|++|.||+|...+ +..||+|....... +...+|..|+.++++ |+||++++
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 75 (277)
T cd05036 12 RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLI 75 (277)
T ss_pred eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 378999999999999854 46789998864432 334679999999999 99999875
No 221
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=95.96 E-value=0.0095 Score=60.14 Aligned_cols=55 Identities=35% Similarity=0.552 Sum_probs=42.9
Q ss_pred EeeccCCceeeeeeee-cCCc----eEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGS----EVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~----~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||+|.. ++|. .||+|.++..... ..+++.+|+.++.+ |+||+.++
T Consensus 13 ~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 75 (279)
T cd05109 13 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLL 75 (279)
T ss_pred eecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEE
Confidence 4799999999999985 4454 4899998654322 35688999999998 99998764
No 222
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=95.96 E-value=0.0059 Score=62.32 Aligned_cols=54 Identities=30% Similarity=0.417 Sum_probs=41.8
Q ss_pred eeccCCceeeeeeeecC-------------C--ceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-------------G--SEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-------------g--~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||++...+ + ..||+|.++.... .....|.+|++++++ |+||++++
T Consensus 12 ~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 12 KLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred ccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 68999999999887532 1 2589999875422 234579999999999 99999874
No 223
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=95.95 E-value=0.011 Score=62.33 Aligned_cols=55 Identities=31% Similarity=0.392 Sum_probs=44.4
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++.- .+|..||||.+... .....+++.+|++++++ |+||++++
T Consensus 22 ~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 81 (353)
T cd07850 22 KPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLL 81 (353)
T ss_pred EEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCccee
Confidence 4789999999999985 46889999998532 22334678899999999 99999874
No 224
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=95.94 E-value=0.0063 Score=64.40 Aligned_cols=55 Identities=20% Similarity=0.344 Sum_probs=44.1
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++.. .++..+|||.++... ....+.+.+|++++.+ |+|||+++
T Consensus 7 ~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~ 67 (363)
T cd05628 7 KVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMF 67 (363)
T ss_pred EEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4799999999999985 457899999986432 2234678899999998 99999875
No 225
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=95.94 E-value=0.0073 Score=60.90 Aligned_cols=54 Identities=26% Similarity=0.447 Sum_probs=42.5
Q ss_pred eeccCCceeeeeeeec------CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA------DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~------~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|... .+..||||+++... .....+|.+|++++++ |+|||+++
T Consensus 13 ~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~ 75 (277)
T cd05062 13 ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 75 (277)
T ss_pred eeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 7899999999998753 24579999986432 2234679999999998 99999875
No 226
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=95.94 E-value=0.0078 Score=66.81 Aligned_cols=54 Identities=24% Similarity=0.374 Sum_probs=43.8
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCcccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPT 579 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l 579 (581)
..||+|+||.||++.. .+|..||||.++... .+....+.+|++.|.+ |+|||++
T Consensus 38 ~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~ 96 (496)
T PTZ00283 38 RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKC 96 (496)
T ss_pred EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEe
Confidence 3799999999999985 578999999986432 2334678899999988 9999875
No 227
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=95.93 E-value=0.01 Score=59.41 Aligned_cols=54 Identities=30% Similarity=0.574 Sum_probs=43.2
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccC-----CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSAS-----SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~-----~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++.. .++..+|+|.+... ..+..+.|.+|++++++ |+||++++
T Consensus 9 ~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 70 (264)
T cd06653 9 LLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYY 70 (264)
T ss_pred eEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEE
Confidence 789999999999986 45889999987432 12234678999999999 99999864
No 228
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=95.93 E-value=0.0037 Score=72.23 Aligned_cols=66 Identities=29% Similarity=0.359 Sum_probs=54.7
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHHHh
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVA 516 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~ 516 (581)
..+..|+|++|.|++ +|.. ...|+.|+|++|+++ .+|..+++++.|+.|+|++|+|+|.+|..+..
T Consensus 402 s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~ 467 (788)
T PRK15387 402 SELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALRE 467 (788)
T ss_pred cCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHH
Confidence 457788888888874 6653 345778899999998 79999999999999999999999999887744
No 229
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.92 E-value=0.0051 Score=68.22 Aligned_cols=55 Identities=31% Similarity=0.421 Sum_probs=46.9
Q ss_pred eeccCCceeeeeeeecC-CceEEEEeeccCCCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLAD-GSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
++|+|-+|+||.|+-.+ ...+|||.+.....+..+-..+||.+.++ |+|||+.++
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLG 639 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLG 639 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhh
Confidence 89999999999999544 45899999976666667788999999999 999998764
No 230
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=95.92 E-value=0.011 Score=58.74 Aligned_cols=55 Identities=24% Similarity=0.398 Sum_probs=45.0
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|.|++|.||+|... ++..+|+|++.... ....+++.+|+++|++ |+||++++
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYY 65 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 36899999999999964 67789999996433 2356789999999998 99999864
No 231
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=95.92 E-value=0.0094 Score=59.12 Aligned_cols=55 Identities=24% Similarity=0.360 Sum_probs=44.7
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.+|++.. .+|..+|+|+++... ....+++.+|++++++ |+||++++
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQ 65 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeE
Confidence 4789999999999886 467899999986432 2335689999999999 99999864
No 232
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=95.92 E-value=0.011 Score=59.79 Aligned_cols=55 Identities=25% Similarity=0.363 Sum_probs=44.1
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++... +|..+|+|+++... ....+.+.+|++++++ |+||++++
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 65 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLY 65 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHH
Confidence 36899999999999974 68899999986432 2234678899999998 99999864
No 233
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=95.91 E-value=0.0095 Score=60.63 Aligned_cols=55 Identities=27% Similarity=0.392 Sum_probs=43.6
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC---CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS---QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~---~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++... +++.+|||.+..... +..+.+..|++++.+ |+|++.++
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~ 66 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLA 66 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeee
Confidence 47899999999998864 678999999864322 223567889999998 99999864
No 234
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.91 E-value=0.006 Score=66.22 Aligned_cols=54 Identities=22% Similarity=0.310 Sum_probs=44.5
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|..|.||-+. ...+..||||++....++..+-..+|+.+|+. |+|||.++
T Consensus 280 kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl 336 (550)
T KOG0578|consen 280 KIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFL 336 (550)
T ss_pred hhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHH
Confidence 78999999999988 45678999999976544444456899999998 99999864
No 235
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=95.90 E-value=0.01 Score=61.33 Aligned_cols=54 Identities=30% Similarity=0.322 Sum_probs=44.0
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCC---ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQ---GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~---~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++.. .++..+|+|.+...... ..+++..|++++++ |+|+|+++
T Consensus 32 ~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 91 (317)
T cd06635 32 EIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYK 91 (317)
T ss_pred eeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 689999999999996 46789999998644322 23578899999999 99999875
No 236
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.89 E-value=0.0074 Score=63.75 Aligned_cols=55 Identities=24% Similarity=0.501 Sum_probs=44.9
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC-CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS-SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~-~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+||+|.||.||||.- ..++.||+|.+... ......+.+.|+.+|++ |+||.+.+
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yy 77 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYY 77 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhh
Confidence 3799999999999996 35678999999743 34456788999999999 99997654
No 237
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=95.89 E-value=0.012 Score=60.40 Aligned_cols=55 Identities=24% Similarity=0.326 Sum_probs=43.6
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC-C-ChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-Q-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~-~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||+|... +|..||+|+++.... . ....+.+|++++.+ |+||++++
T Consensus 13 ~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 72 (309)
T cd07845 13 NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELK 72 (309)
T ss_pred eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceE
Confidence 47899999999999974 588999999864322 2 23457789999999 99999864
No 238
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=95.89 E-value=0.01 Score=60.29 Aligned_cols=55 Identities=31% Similarity=0.509 Sum_probs=42.4
Q ss_pred EeeccCCceeeeeeeecC------CceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLAD------GSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~------g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||+|...+ +..||+|.++.... ....+|.+|+.++++ |+||++++
T Consensus 12 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 75 (288)
T cd05061 12 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLL 75 (288)
T ss_pred eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 479999999999997532 45799998864422 223568899999998 99999875
No 239
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=95.88 E-value=0.0025 Score=57.36 Aligned_cols=66 Identities=29% Similarity=0.513 Sum_probs=46.9
Q ss_pred CceeEeecCCCCCceecchhhhcc-cCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHH
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNL-KSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSL 514 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l-~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l 514 (581)
.+++.++|++|+|. .+|+.|... +.++.|+|++|.++ .+|.++..++.|+.|+++.|.|. ..|.-+
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi 119 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVI 119 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHH
Confidence 45777788888876 566666544 46777888888877 77887888888888888888776 334433
No 240
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=95.87 E-value=0.0099 Score=59.74 Aligned_cols=55 Identities=29% Similarity=0.497 Sum_probs=43.7
Q ss_pred EeeccCCceeeeeeeecC------CceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLAD------GSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~------g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||+|...+ +..||+|.+..... ....+|.+|+++|++ |+||++++
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 75 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLL 75 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEE
Confidence 378999999999998743 35799999865432 234679999999998 99999875
No 241
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=95.86 E-value=0.015 Score=59.40 Aligned_cols=55 Identities=27% Similarity=0.400 Sum_probs=43.9
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||.|++|.||++... ++..+|||++.... ......+.+|++++++ |+||++++
T Consensus 14 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 73 (311)
T cd07866 14 GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLI 73 (311)
T ss_pred EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchh
Confidence 37899999999999964 67899999985432 2224567899999998 99999874
No 242
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=95.86 E-value=0.011 Score=58.61 Aligned_cols=55 Identities=27% Similarity=0.414 Sum_probs=44.0
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|.|+||.||++.. .++..+|+|.++... ....+++..|++++++ |+||++++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYY 65 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceee
Confidence 3689999999999985 467899999986432 2234678899999999 99999864
No 243
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=95.86 E-value=0.014 Score=60.20 Aligned_cols=55 Identities=31% Similarity=0.436 Sum_probs=45.2
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC---CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS---QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~---~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|++|.||++... ++..+|+|.+..... ...+.+.+|+++|.+ |+||++++
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 67 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLY 67 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhhe
Confidence 47899999999999975 478999999865432 245679999999999 99999875
No 244
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=95.84 E-value=0.0091 Score=60.70 Aligned_cols=54 Identities=28% Similarity=0.372 Sum_probs=42.9
Q ss_pred eeccCCceeeeeeeecC-----------------CceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-----------------GSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-----------------g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++...+ +..||+|++..... ...++|.+|++++++ |+|||+++
T Consensus 12 ~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 85 (296)
T cd05051 12 KLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLL 85 (296)
T ss_pred cccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEE
Confidence 78999999999988643 24589999875432 345789999999999 99999864
No 245
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=95.84 E-value=0.016 Score=59.12 Aligned_cols=55 Identities=20% Similarity=0.301 Sum_probs=43.5
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||++... ++..||||.+.... ......+.+|++++++ ||||++++
T Consensus 18 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 77 (310)
T cd07865 18 AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 77 (310)
T ss_pred EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceE
Confidence 47899999999999964 67899999885432 2223456789999998 99999875
No 246
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=95.83 E-value=0.0087 Score=62.49 Aligned_cols=55 Identities=20% Similarity=0.308 Sum_probs=43.3
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||+++.. ++..+|+|.++.. .....+.|.+|+.++.+ |+||+.++
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~ 67 (331)
T cd05624 7 KVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLH 67 (331)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 47899999999999964 5678999998642 12234568889999888 99999875
No 247
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=95.83 E-value=0.012 Score=59.83 Aligned_cols=54 Identities=22% Similarity=0.293 Sum_probs=43.4
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCC-C-ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS-Q-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~-~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|.|++|.||+|... ++..+|+|.++.... . -...+.+|++++.+ ||||++++
T Consensus 12 ~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~ 70 (293)
T cd07843 12 RIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVK 70 (293)
T ss_pred hhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEE
Confidence 6899999999999975 578999999964322 2 23467889999999 99999864
No 248
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=95.83 E-value=0.013 Score=58.26 Aligned_cols=52 Identities=29% Similarity=0.487 Sum_probs=43.4
Q ss_pred EeeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++... |..+|+|..+.. ...+.|.+|++++++ |+|+++++
T Consensus 12 ~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05082 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLL 65 (256)
T ss_pred eeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEE
Confidence 47899999999999875 678999998643 235689999999999 99999865
No 249
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=95.83 E-value=0.012 Score=59.36 Aligned_cols=55 Identities=25% Similarity=0.332 Sum_probs=45.0
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|++|.||++... ++..||||+++.. .....+.+.+|++++++ |+||++++
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 66 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLK 66 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehh
Confidence 36899999999999975 5779999998643 23345789999999999 99999875
No 250
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=95.82 E-value=0.013 Score=59.30 Aligned_cols=54 Identities=24% Similarity=0.452 Sum_probs=43.1
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
..||+|+||.||++.. .++..+|+|.++.. .....++.+|++++.+ |+||++++
T Consensus 24 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~ 81 (286)
T cd06638 24 ETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFY 81 (286)
T ss_pred eeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeee
Confidence 3789999999999986 45789999988643 2234678899988877 99999874
No 251
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=95.82 E-value=0.014 Score=60.79 Aligned_cols=55 Identities=25% Similarity=0.315 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++.- .++..||||++... .....+.+..|++++.+ |||||+++
T Consensus 16 ~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 75 (328)
T cd07856 16 QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLS 75 (328)
T ss_pred EeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEe
Confidence 4799999999999985 47889999988532 22345778899999999 99999864
No 252
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=95.82 E-value=0.013 Score=59.46 Aligned_cols=53 Identities=26% Similarity=0.391 Sum_probs=45.1
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||++... ++..+++|++..... ..+++.+|++++++ |+|+++++
T Consensus 26 ~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~ 81 (286)
T cd06614 26 KIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYY 81 (286)
T ss_pred hccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEE
Confidence 6899999999999986 678999999975433 56789999999999 99998764
No 253
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=95.81 E-value=0.01 Score=61.09 Aligned_cols=54 Identities=24% Similarity=0.393 Sum_probs=42.3
Q ss_pred eeccCCceeeeeeee------cCCceEEEEeeccCCC-CChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL------ADGSEVAIKMLSASSS-QGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l------~~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+|+||.||++.. ..+..||||+++.... ...+.|.+|++++++ |+|||+++
T Consensus 42 ~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 105 (302)
T cd05055 42 TLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLL 105 (302)
T ss_pred eeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEE
Confidence 789999999999874 2345799999875432 224679999999988 99999875
No 254
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=95.80 E-value=0.011 Score=59.01 Aligned_cols=54 Identities=22% Similarity=0.260 Sum_probs=44.6
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||.|++|.||++... ++..+|+|++.... ....+++.+|++++++ |+||++++
T Consensus 8 ~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 65 (265)
T cd06605 8 ELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFY 65 (265)
T ss_pred HhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhh
Confidence 5899999999999975 57899999986543 2345789999999998 99998764
No 255
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=95.80 E-value=0.011 Score=59.16 Aligned_cols=54 Identities=26% Similarity=0.391 Sum_probs=41.9
Q ss_pred eeccCCceeeeeeeecC--CceEEEEeeccC----------CCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD--GSEVAIKMLSAS----------SSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~--g~~VAVK~l~~~----------~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+|+||.||++...+ +..+|+|.+... .....+++..|++++.+ ||||++++
T Consensus 7 ~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~ 75 (269)
T cd08528 7 HLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYY 75 (269)
T ss_pred hhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEE
Confidence 58999999999999865 578999987532 11224568889998875 99999875
No 256
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=95.80 E-value=0.014 Score=57.77 Aligned_cols=55 Identities=27% Similarity=0.374 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||.++. .++..+++|.+... +....++|.+|++++++ |+||++++
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~ 65 (256)
T cd08221 6 RVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYY 65 (256)
T ss_pred eEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEE
Confidence 4799999999888775 46788999988643 23445789999999999 99999875
No 257
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=95.79 E-value=0.011 Score=61.35 Aligned_cols=55 Identities=24% Similarity=0.339 Sum_probs=41.3
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHH---hc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELI---DY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l---~~--H~NlV~l~ 580 (581)
..||+|+||.||++... ++..||||.++... ....+.+.+|++++ ++ ||||++++
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~ 68 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLF 68 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhcee
Confidence 47899999999999864 67899999996432 22345677776654 44 99999875
No 258
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=95.78 E-value=0.011 Score=60.03 Aligned_cols=55 Identities=25% Similarity=0.337 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|++|.||++... ++..+|+|.+.... ....+.+.+|++++++ ||||++++
T Consensus 7 ~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 67 (290)
T cd05580 7 KTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLY 67 (290)
T ss_pred EEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCcccee
Confidence 37899999999999974 57899999986432 2234678999999999 99999875
No 259
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=95.77 E-value=0.0094 Score=65.82 Aligned_cols=55 Identities=11% Similarity=0.192 Sum_probs=43.1
Q ss_pred EeeccCCceeeeeeeec-C-CceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-D-GSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~-g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|+||.||++.-. + +..||+|.+..........+.+|+++|++ |||||+++
T Consensus 73 ~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~ 131 (478)
T PTZ00267 73 TLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHF 131 (478)
T ss_pred EEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEE
Confidence 37899999999999753 3 56788887754433334678899999999 99999875
No 260
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=95.77 E-value=0.012 Score=58.54 Aligned_cols=51 Identities=31% Similarity=0.524 Sum_probs=42.4
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||++.. .+..+|+|.++.. ...+.|.+|++++++ ||||++++
T Consensus 13 ~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~ 65 (254)
T cd05083 13 IIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLL 65 (254)
T ss_pred eeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEE
Confidence 789999999999985 5678999998643 234689999999998 99999864
No 261
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=95.77 E-value=0.009 Score=61.02 Aligned_cols=55 Identities=25% Similarity=0.353 Sum_probs=42.6
Q ss_pred EeeccCCceeeeeeeec-----------------CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-----------------DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-----------------~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++... ++..+|+|+++... ....++|.+|+++|++ |+||++++
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 11 EKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred eeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 37899999999987532 23468999997543 2345789999999999 99999864
No 262
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.76 E-value=0.011 Score=60.65 Aligned_cols=55 Identities=27% Similarity=0.418 Sum_probs=42.5
Q ss_pred EeeccCCceeeeeeeec--------CCceEEEEeeccCC-CCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA--------DGSEVAIKMLSASS-SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~--------~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
+.||+|+||.||+++.. ++..+|+|.++... ....+++.+|++++.+ |+|||+++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~ 90 (307)
T cd05098 24 KPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLL 90 (307)
T ss_pred eeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEE
Confidence 37899999999998752 23469999997542 2345678899999887 99999875
No 263
>PHA03211 serine/threonine kinase US3; Provisional
Probab=95.76 E-value=0.012 Score=64.79 Aligned_cols=49 Identities=18% Similarity=0.103 Sum_probs=40.7
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... .+..||||... ...+.+|+++|++ |+|||+++
T Consensus 175 ~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~ 226 (461)
T PHA03211 175 RALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALL 226 (461)
T ss_pred EEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEE
Confidence 47999999999999975 46789999642 2357789999999 99999875
No 264
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=95.75 E-value=0.012 Score=60.51 Aligned_cols=54 Identities=26% Similarity=0.485 Sum_probs=42.0
Q ss_pred eeccCCceeeeeeeec-CCc--eEEEEeeccCC-CCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGS--EVAIKMLSASS-SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~--~VAVK~l~~~~-~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.+|+|+||.||++... ++. .+|+|+++... ....++|.+|++++.+ |+|||+++
T Consensus 14 ~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~ 74 (303)
T cd05088 14 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 74 (303)
T ss_pred eecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEE
Confidence 7899999999999974 444 46888876432 3345689999999887 99999874
No 265
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=95.73 E-value=0.0092 Score=64.48 Aligned_cols=56 Identities=25% Similarity=0.427 Sum_probs=47.1
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC---CChHHHHHHHHHHhc--CCCcccccC
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS---QGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~---~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
..||+|+||.||.++-. .|..+|+|+|+.+.. ...+...+|-.+|.. ++.||+|+|
T Consensus 147 k~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyY 208 (550)
T KOG0605|consen 147 KVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYY 208 (550)
T ss_pred eeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEE
Confidence 48999999999999864 588999999986543 335678899999998 999999985
No 266
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=95.73 E-value=0.016 Score=60.35 Aligned_cols=55 Identities=22% Similarity=0.314 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|.|++|.||++.. .+|..||+|+++... ....+.+.+|+++|++ |+|||+++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 70 (334)
T cd07855 11 ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIR 70 (334)
T ss_pred eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHH
Confidence 3789999999999986 468899999987532 2345678899999999 99999753
No 267
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=95.73 E-value=0.013 Score=58.19 Aligned_cols=54 Identities=28% Similarity=0.553 Sum_probs=43.5
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC-----CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS-----QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~-----~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||++.. .++..+|+|.+..... ...+.+.+|++++++ ||||++++
T Consensus 9 ~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 70 (263)
T cd06625 9 LLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYY 70 (263)
T ss_pred eecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeE
Confidence 789999999999986 4678999998864321 124578999999999 99999874
No 268
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.71 E-value=0.012 Score=60.44 Aligned_cols=55 Identities=27% Similarity=0.433 Sum_probs=42.7
Q ss_pred EeeccCCceeeeeeee--------cCCceEEEEeeccCC-CCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL--------ADGSEVAIKMLSASS-SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l--------~~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
+.+|+|+||.||+++. .++..||+|.++... ....+++.+|++++.+ |+||++++
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 87 (304)
T cd05101 21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL 87 (304)
T ss_pred ceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchhee
Confidence 3789999999999974 124579999986432 3345789999999886 99999865
No 269
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=95.71 E-value=0.015 Score=60.39 Aligned_cols=54 Identities=26% Similarity=0.349 Sum_probs=45.1
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||.|++|.||++... .+..+|||++.... ....+.+.+|++++++ |+||++++
T Consensus 7 ~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (330)
T cd07834 7 PIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLL 65 (330)
T ss_pred eecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhh
Confidence 6899999999999975 47899999997543 3345789999999999 99998864
No 270
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=95.67 E-value=0.018 Score=56.89 Aligned_cols=55 Identities=25% Similarity=0.389 Sum_probs=44.5
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|++|.||++.. .++..+|||++... .....+++.+|+++|++ |+||++++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 65 (256)
T cd08220 6 RVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYY 65 (256)
T ss_pred EEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhhee
Confidence 4789999999999886 46778999998643 22345789999999999 99999764
No 271
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=95.65 E-value=0.012 Score=62.15 Aligned_cols=55 Identities=20% Similarity=0.339 Sum_probs=44.4
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++... ++..||||.++.. .....+.+.+|++++.+ |+|||+++
T Consensus 7 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~ 67 (360)
T cd05627 7 KVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMF 67 (360)
T ss_pred EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEE
Confidence 47999999999999864 5789999998642 22335678899999998 99999875
No 272
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=95.63 E-value=0.0067 Score=59.79 Aligned_cols=55 Identities=25% Similarity=0.280 Sum_probs=49.1
Q ss_pred EeeccCCceeeeeee-ecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGY-LADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|||..||.++ +.++..+|+|++...+.++.++-.+|++.-++ |||+++++
T Consensus 27 ~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~ 84 (302)
T KOG2345|consen 27 RLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLV 84 (302)
T ss_pred eeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHH
Confidence 378999999999988 77888999999988877788899999999999 99998864
No 273
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=95.62 E-value=0.014 Score=62.23 Aligned_cols=55 Identities=27% Similarity=0.416 Sum_probs=42.7
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC----CC-CChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS----SS-QGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~----~~-~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
+.+|+|.||.|+.|.- ..+..||||.++.. .. ...+...+|+.++++ ||||++++
T Consensus 23 ~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ 86 (370)
T KOG0583|consen 23 RTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLL 86 (370)
T ss_pred eeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEE
Confidence 3789999999999974 56799999976542 12 234556689999998 99999874
No 274
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=95.62 E-value=0.016 Score=58.81 Aligned_cols=55 Identities=24% Similarity=0.396 Sum_probs=43.7
Q ss_pred EeeccCCceeeeeeee----cCCceEEEEeeccCC----CCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL----ADGSEVAIKMLSASS----SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l----~~g~~VAVK~l~~~~----~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
..+|+|+||.||.+.. ++|..||+|++.... ....+++.+|+++|.+ |+||++++
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~ 71 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLH 71 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhcee
Confidence 3689999999999885 468899999986432 1234678899999988 89999875
No 275
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=95.61 E-value=0.02 Score=55.01 Aligned_cols=54 Identities=30% Similarity=0.522 Sum_probs=46.0
Q ss_pred eeccCCceeeeeeeecC-CceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-GSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|.|++|.||++...+ +..+|+|.+...... ..+.+.+|++.+.+ |+|+++++
T Consensus 6 ~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~ 63 (225)
T smart00221 6 KLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLY 63 (225)
T ss_pred EeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhhe
Confidence 68999999999999875 789999999765444 56789999999999 99998864
No 276
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=95.60 E-value=0.019 Score=56.59 Aligned_cols=54 Identities=31% Similarity=0.524 Sum_probs=44.8
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCC--CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS--QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~--~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||++... ++..+++|.+..... ...+++.+|++++++ |+|+++++
T Consensus 7 ~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (254)
T cd06627 7 LIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYI 65 (254)
T ss_pred EEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEE
Confidence 6899999999999864 577999999976543 345789999999999 99998864
No 277
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=95.59 E-value=0.01 Score=58.74 Aligned_cols=55 Identities=29% Similarity=0.524 Sum_probs=41.9
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCCCC--hHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQG--PKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~--~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+|+||.||++... ++..+|+|.+....... ..+...|++++.+ |+||++++
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~ 64 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQIL 64 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccc
Confidence 47899999999999975 45689999997553222 1234568999998 99999764
No 278
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=95.57 E-value=0.016 Score=60.56 Aligned_cols=54 Identities=20% Similarity=0.310 Sum_probs=43.2
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccC--CCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSAS--SSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.+|+|+||.||+|... +|..+|||++... .....+.+.+|++++++ |+||++++
T Consensus 14 ~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~ 73 (337)
T cd07852 14 KLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLL 73 (337)
T ss_pred hhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCcccee
Confidence 6899999999999975 5789999988542 22334678889999887 99999875
No 279
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=95.57 E-value=0.015 Score=61.99 Aligned_cols=55 Identities=20% Similarity=0.344 Sum_probs=43.7
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... ++..+|+|.+... .....+.+.+|+++++. |||||+++
T Consensus 49 ~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~ 109 (371)
T cd05622 49 KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF 109 (371)
T ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 47999999999999975 5678999998532 22234568899999988 99999875
No 280
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=95.56 E-value=0.017 Score=66.49 Aligned_cols=55 Identities=20% Similarity=0.333 Sum_probs=44.8
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCCC---ChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQ---GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~---~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... ++..||||.++..... ..+++.+|+++++. |+|||+++
T Consensus 10 ~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~ 70 (669)
T cd05610 10 KPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLY 70 (669)
T ss_pred EEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEE
Confidence 47899999999999975 6789999998643222 23678899999988 99999875
No 281
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=95.56 E-value=0.013 Score=61.23 Aligned_cols=55 Identities=22% Similarity=0.338 Sum_probs=43.0
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... .+..+|+|.+... .....+.|.+|+.++.+ |+||++++
T Consensus 7 ~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 67 (332)
T cd05623 7 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLH 67 (332)
T ss_pred EEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEE
Confidence 47999999999999975 4678999998532 12234568899999888 99999875
No 282
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=95.56 E-value=0.019 Score=58.60 Aligned_cols=55 Identities=18% Similarity=0.360 Sum_probs=43.5
Q ss_pred EeeccCCceeeeeeeecC-CceEEEEeeccCCC-CChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLAD-GSEVAIKMLSASSS-QGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
..+|+|++|.||++...+ +..||||+++.... ...+++..|++++.+ |+||++++
T Consensus 21 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~ 80 (296)
T cd06618 21 GEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCY 80 (296)
T ss_pred eEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhh
Confidence 378999999999999865 88999999965432 234667788877766 89999875
No 283
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=95.55 E-value=0.016 Score=60.34 Aligned_cols=55 Identities=24% Similarity=0.375 Sum_probs=42.7
Q ss_pred EeeccCCceeeeeeee----cCCceEEEEeeccCC----CCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL----ADGSEVAIKMLSASS----SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l----~~g~~VAVK~l~~~~----~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
+.||+|+||.||+++. .++..+|+|.++... ....+.+..|+++|.+ |+||+.++
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~ 71 (332)
T cd05614 6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLH 71 (332)
T ss_pred EEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEE
Confidence 4789999999998875 357899999986421 2234568899999987 89999874
No 284
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=95.53 E-value=0.0099 Score=61.36 Aligned_cols=55 Identities=24% Similarity=0.347 Sum_probs=44.9
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|.+|.|.++.- .+|..||||++... ..-..+.=.+|+++|.. |+|||.++
T Consensus 28 ~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~ 87 (359)
T KOG0660|consen 28 EPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLL 87 (359)
T ss_pred ccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEE
Confidence 3689999999999986 57899999999632 22335777899999999 99999875
No 285
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=95.52 E-value=0.018 Score=59.43 Aligned_cols=54 Identities=28% Similarity=0.326 Sum_probs=43.6
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCC---ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQ---GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~---~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|+||.||+|.. .+|..|++|.+...... ..+++.+|++++++ |+|+++++
T Consensus 28 ~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 87 (313)
T cd06633 28 EIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYK 87 (313)
T ss_pred eeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEE
Confidence 689999999999986 46789999998643322 23578899999999 99999864
No 286
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=95.51 E-value=0.014 Score=66.56 Aligned_cols=55 Identities=29% Similarity=0.395 Sum_probs=45.3
Q ss_pred eeccCCceeeeeeeec----C----CceEEEEeeccCCCC-ChHHHHHHHHHHhc---CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLA----D----GSEVAIKMLSASSSQ-GPKQFRTEVELIDY---YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~----~----g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~---H~NlV~l~~ 581 (581)
.+|+|.||.|++|.+. . ...||||+++..... ..+.+..|+++|+. |+|||.|++
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 5899999999999863 1 357999999865443 45789999999998 999999875
No 287
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=95.51 E-value=0.017 Score=63.33 Aligned_cols=54 Identities=26% Similarity=0.454 Sum_probs=44.8
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCC--ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQ--GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~--~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|.|+.|..+.- ..+..||||.+++.... ..+.+.+|+++|.. |||||+|+
T Consensus 63 tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~ 121 (596)
T KOG0586|consen 63 TIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLF 121 (596)
T ss_pred eeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeee
Confidence 789999999999885 45889999999765332 24669999999999 99999985
No 288
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=95.50 E-value=0.015 Score=59.17 Aligned_cols=55 Identities=29% Similarity=0.456 Sum_probs=42.5
Q ss_pred EeeccCCceeeeeeeecC------CceEEEEeeccCC-CCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLAD------GSEVAIKMLSASS-SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~------g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
..+|+|++|.||++...+ ...+|+|.++... .+...++.+|++++.+ |+||++++
T Consensus 18 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~ 82 (293)
T cd05053 18 KPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLL 82 (293)
T ss_pred eEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 378999999999998642 3579999987532 2334678999998887 99999864
No 289
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=95.45 E-value=0.023 Score=57.15 Aligned_cols=55 Identities=18% Similarity=0.180 Sum_probs=41.9
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCC-CChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS-QGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
+.+|+|+||.||++.. .++..+|+|+++.... ....+...|++++.+ |+||++++
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~ 64 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLI 64 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceE
Confidence 3689999999999986 4678999999875422 223345678888877 99999875
No 290
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=95.43 E-value=0.023 Score=59.20 Aligned_cols=55 Identities=29% Similarity=0.363 Sum_probs=43.3
Q ss_pred EeeccCCceeeeeeeec-C--CceEEEEeeccCC--CCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-D--GSEVAIKMLSASS--SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~--g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
..||+|+||.||++... . +..+|+|++.... ....+.+.+|++++.+ |||||+++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 68 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLY 68 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheee
Confidence 36899999999999974 3 6789999986432 2235678899999986 99999875
No 291
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=95.42 E-value=0.024 Score=55.76 Aligned_cols=55 Identities=27% Similarity=0.416 Sum_probs=45.1
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC--CChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS--QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~--~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|.|++|.||++... ++..+++|++..... ...+++.+|++++++ |+|+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~ 65 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYY 65 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheE
Confidence 36899999999999975 578999999965433 445789999999999 99998763
No 292
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=95.42 E-value=0.0091 Score=62.50 Aligned_cols=65 Identities=29% Similarity=0.435 Sum_probs=56.2
Q ss_pred ceeEeecCCCCCceecchhhh-cccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHH
Q 008008 447 KIISLNLTSEGLTGKISPSLS-NLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSL 514 (581)
Q Consensus 447 ~l~~l~Ls~n~l~G~ip~~l~-~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l 514 (581)
.+..+.+..|.+. .+|.+.+ .|.+|..|||..|++. ++|++++.+.+|+.||+|+|.+++ +|.++
T Consensus 229 ~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~-Lp~sL 294 (565)
T KOG0472|consen 229 LLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS-LPYSL 294 (565)
T ss_pred HHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc-CCccc
Confidence 4677888888876 6788776 8999999999999998 899999999999999999999984 55554
No 293
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=95.42 E-value=0.0098 Score=57.93 Aligned_cols=51 Identities=20% Similarity=0.479 Sum_probs=44.5
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeeccCCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.+|.|.++.|+.|. +.+...++||.|++. ..++..+||.+|.. |||||.|+
T Consensus 45 k~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~ 99 (338)
T KOG0668|consen 45 KVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLL 99 (338)
T ss_pred HHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehh
Confidence 68999999999998 567789999999875 34678999999998 99999985
No 294
>PHA03207 serine/threonine kinase US3; Provisional
Probab=95.41 E-value=0.019 Score=61.52 Aligned_cols=50 Identities=16% Similarity=0.224 Sum_probs=40.4
Q ss_pred EeeccCCceeeeeeeec---CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA---DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~---~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... .+..||||.+... +.+.+|+++|++ |||||+++
T Consensus 98 ~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~ 152 (392)
T PHA03207 98 SSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLI 152 (392)
T ss_pred EeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCcccee
Confidence 47899999999998753 3468999988532 346789999999 99999875
No 295
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=95.39 E-value=0.02 Score=57.49 Aligned_cols=54 Identities=26% Similarity=0.374 Sum_probs=44.8
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||+|+.. ++..+|+|.+.... ....+++..|++++++ |+||++++
T Consensus 6 ~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 64 (282)
T cd07829 6 KLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLL 64 (282)
T ss_pred cccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHH
Confidence 6899999999999975 48899999997543 2335788999999999 99999864
No 296
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=95.39 E-value=0.023 Score=56.28 Aligned_cols=55 Identities=22% Similarity=0.294 Sum_probs=44.1
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++... ++..+|+|.++... ....+++.+|++++++ |+||++++
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 64 (255)
T cd08219 6 RVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFK 64 (255)
T ss_pred EEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 47899999999999864 57889999886432 2345778899999998 99999864
No 297
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=95.37 E-value=0.019 Score=58.92 Aligned_cols=55 Identities=15% Similarity=0.336 Sum_probs=44.4
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|+||.||++... .+..|++|.+.... ....+++.+|++++.+ |+||++++
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 67 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMF 67 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeE
Confidence 47899999999999864 56789999986543 2234678899999999 99999875
No 298
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=95.35 E-value=0.024 Score=56.94 Aligned_cols=54 Identities=28% Similarity=0.603 Sum_probs=43.3
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCC-CCChHHHHHHHHHHhc-----CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASS-SQGPKQFRTEVELIDY-----YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~-----H~NlV~l~ 580 (581)
.+|+|+||.||+|.. .++..+|||.++... ....+++.+|++++++ |||+++++
T Consensus 8 ~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~ 68 (277)
T cd06917 8 LIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYY 68 (277)
T ss_pred heeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEe
Confidence 589999999999996 568899999986442 3345678899988776 89998764
No 299
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=95.33 E-value=0.011 Score=61.94 Aligned_cols=54 Identities=33% Similarity=0.521 Sum_probs=44.6
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC---CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS---QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~---~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|-+|.|-++.- ..|+.||||.++.+.. |..-...+||++|+. ||||++++
T Consensus 60 tLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~Iy 119 (668)
T KOG0611|consen 60 TLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIY 119 (668)
T ss_pred HhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehh
Confidence 579999999999885 5689999999976543 444456899999999 99999864
No 300
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=95.32 E-value=0.021 Score=59.42 Aligned_cols=55 Identities=24% Similarity=0.259 Sum_probs=41.7
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccC---CCCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSAS---SSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
+.||+|+||.||++.. .+|..||+|.++.. .....+.+..|++++.. |++|++++
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~ 67 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLH 67 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhhee
Confidence 4799999999999986 46789999998643 22345678888888876 56676653
No 301
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=95.31 E-value=0.021 Score=59.27 Aligned_cols=56 Identities=27% Similarity=0.326 Sum_probs=46.2
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCC-hHHHHHHHHHHhc--CCCcccccC
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQG-PKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~-~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
..+|+|..|+|||+.- ..++..|+|.+....... .++..+|++++.+ ||+||.+++
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~yg 144 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYG 144 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeE
Confidence 3789999999999997 467899999995443333 4789999999999 999998763
No 302
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=95.26 E-value=0.0091 Score=42.73 Aligned_cols=33 Identities=36% Similarity=0.929 Sum_probs=23.0
Q ss_pred cchhhhhhhhhhhcc-----CCCCCCC----CCCCCCcccccCccCC
Q 008008 402 QDDVNAIMDIKLSYD-----LGKGWQG----DPCSPMYYSWDGLNCS 439 (581)
Q Consensus 402 ~~d~~aL~~~k~~~~-----~~~~W~g----~pC~~~~~~W~Gv~C~ 439 (581)
++|.++|++||+.+. .+.+|+. +|| .|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C-----~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPC-----SWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CC-----CSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCe-----eeccEEeC
Confidence 468999999998875 2568963 556 79999995
No 303
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=95.26 E-value=0.026 Score=56.95 Aligned_cols=53 Identities=25% Similarity=0.597 Sum_probs=42.9
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.+|.|+||.||+|.. .++..+|+|..... .....++..|+.++.+ |+||++++
T Consensus 23 ~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~ 79 (282)
T cd06636 23 VVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYY 79 (282)
T ss_pred eeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 689999999999997 46789999988543 2334678899998887 99999864
No 304
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.26 E-value=0.02 Score=59.67 Aligned_cols=54 Identities=28% Similarity=0.397 Sum_probs=41.7
Q ss_pred eeccCCceeeeeeeec--------CCceEEEEeeccCC-CCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA--------DGSEVAIKMLSASS-SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~--------~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+|+||.||++... ....||+|.++... ....++|.+|++++.+ |+|||+++
T Consensus 19 ~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (334)
T cd05100 19 PLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLL 84 (334)
T ss_pred eeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeee
Confidence 7899999999998742 12368999886432 2345789999999987 99999864
No 305
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=95.24 E-value=0.029 Score=56.49 Aligned_cols=55 Identities=27% Similarity=0.363 Sum_probs=41.1
Q ss_pred EeeccCCceeeeeeeecC-CceEEEEeeccCCC--CChHHHHHHHHHHhc-----CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLAD-GSEVAIKMLSASSS--QGPKQFRTEVELIDY-----YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~~~--~~~~ef~~Ei~~l~~-----H~NlV~l~ 580 (581)
+.+|+|+||.||++...+ +..+|+|+++.... ....++.+|++++.+ |+||++++
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~ 67 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLL 67 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEE
Confidence 368999999999999864 88999999964322 223457778776543 99999864
No 306
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=95.21 E-value=0.03 Score=55.81 Aligned_cols=54 Identities=24% Similarity=0.515 Sum_probs=44.3
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
..+|+|++|.||++... ++..+++|.++... ...++|.+|++++++ |+||++++
T Consensus 12 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~ 69 (275)
T cd06608 12 EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFY 69 (275)
T ss_pred eeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEE
Confidence 37899999999999974 56789999986543 245789999999987 99999864
No 307
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=95.19 E-value=0.031 Score=56.17 Aligned_cols=54 Identities=28% Similarity=0.369 Sum_probs=44.2
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCC--CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS--QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~--~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|.|++|.||++... ++..+++|+++.... ...+.+..|++++++ |+||++++
T Consensus 6 ~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 64 (283)
T cd05118 6 KIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLL 64 (283)
T ss_pred eeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHH
Confidence 6899999999999874 678999999865432 235678899999999 99999864
No 308
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=95.19 E-value=0.03 Score=55.43 Aligned_cols=55 Identities=27% Similarity=0.385 Sum_probs=44.2
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.+|+|++|.||++... ++..+|+|++.... ....+.+.+|++++++ |+|+++++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYR 65 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeee
Confidence 47899999999999864 56789999986432 2345678999999999 99999864
No 309
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=95.18 E-value=0.024 Score=58.84 Aligned_cols=54 Identities=24% Similarity=0.278 Sum_probs=41.1
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHhc--C-CCcccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--Y-KNLSPT 579 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H-~NlV~l 579 (581)
+.||+|+||.||+|... .+..||||.++.. .....+.+..|++++.. | ++|+.+
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~ 66 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQL 66 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeee
Confidence 47899999999999975 4678999998643 23345678899998887 5 456655
No 310
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=95.16 E-value=0.023 Score=56.93 Aligned_cols=54 Identities=28% Similarity=0.381 Sum_probs=43.7
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.+|.|++|.||++... +|..+|+|.+.... ....+++.+|++++.+ |+||++++
T Consensus 8 ~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~ 68 (280)
T cd05581 8 IIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLY 68 (280)
T ss_pred eecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHH
Confidence 6899999999999975 68899999986532 2334678899999988 99999864
No 311
>PRK10345 hypothetical protein; Provisional
Probab=95.14 E-value=0.027 Score=55.13 Aligned_cols=52 Identities=23% Similarity=0.402 Sum_probs=40.5
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc-------CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY-------YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~-------H~NlV~l~ 580 (581)
.||+|+||.||. .-.++.. +||+......+..+++.+|++++.+ ||||++++
T Consensus 9 ~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~y 67 (210)
T PRK10345 9 PLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYY 67 (210)
T ss_pred eecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceee
Confidence 689999999996 3344444 7998876545566789999999886 59999876
No 312
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=95.14 E-value=0.029 Score=66.36 Aligned_cols=55 Identities=22% Similarity=0.263 Sum_probs=44.4
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++... .+..+|+|.+.... ......|..|+++|.+ |||||+++
T Consensus 19 ~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~ 78 (1021)
T PTZ00266 19 KKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYI 78 (1021)
T ss_pred EEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEE
Confidence 47999999999999964 56689999886432 2235679999999999 99999875
No 313
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=95.12 E-value=0.028 Score=57.91 Aligned_cols=54 Identities=28% Similarity=0.340 Sum_probs=43.2
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||+|... ++..+|+|.+.... ....+++.+|++++++ |+|+++++
T Consensus 22 ~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 81 (308)
T cd06634 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81 (308)
T ss_pred heeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEE
Confidence 6899999999999964 57789999886432 2234678899999999 99999864
No 314
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=95.11 E-value=0.023 Score=57.56 Aligned_cols=55 Identities=25% Similarity=0.413 Sum_probs=43.3
Q ss_pred EeeccCCceeeeeeee----cCCceEEEEeeccCC----CCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL----ADGSEVAIKMLSASS----SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l----~~g~~VAVK~l~~~~----~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
..+|+|++|.||++.. .++..+|||.++... ....+++.+|++++.+ |+||++++
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~ 71 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLH 71 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhh
Confidence 3689999999999875 356789999986421 2335678999999998 99999875
No 315
>PHA03209 serine/threonine kinase US3; Provisional
Probab=95.09 E-value=0.034 Score=58.79 Aligned_cols=49 Identities=16% Similarity=0.150 Sum_probs=39.1
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||+|... .+..||+|..... ....|+.++++ |+|||+++
T Consensus 72 ~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~ 123 (357)
T PHA03209 72 KTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMK 123 (357)
T ss_pred EEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChh
Confidence 47899999999999975 4568999975322 23568999999 99999875
No 316
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=95.09 E-value=0.023 Score=58.56 Aligned_cols=55 Identities=29% Similarity=0.420 Sum_probs=42.2
Q ss_pred EeeccCCceeeeeeeec--------CCceEEEEeeccCC-CCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA--------DGSEVAIKMLSASS-SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~--------~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
+.+|+|+||.||+++.. ....+|+|.++... .....++..|++++.+ |||||+++
T Consensus 18 ~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 84 (314)
T cd05099 18 KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLL 84 (314)
T ss_pred eeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence 37899999999998741 24578999987542 2335678999999987 99999875
No 317
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=95.07 E-value=0.025 Score=59.25 Aligned_cols=55 Identities=29% Similarity=0.402 Sum_probs=43.8
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|++|.||+|... ++..||||++... .....+++.+|++++++ |+||++++
T Consensus 21 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 80 (343)
T cd07851 21 SPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLL 80 (343)
T ss_pred EEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHH
Confidence 47899999999999975 5789999998643 22234678889999998 99998753
No 318
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=95.01 E-value=0.029 Score=58.20 Aligned_cols=55 Identities=24% Similarity=0.246 Sum_probs=41.0
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
..||+|+||.||++... ++..+|||.++... ....+++..|.+++.. |++|+.++
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~ 67 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLH 67 (323)
T ss_pred EEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEE
Confidence 47899999999999865 56799999986432 2234567778877765 88887654
No 319
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=94.96 E-value=0.04 Score=55.92 Aligned_cols=54 Identities=30% Similarity=0.474 Sum_probs=42.8
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
..+|+|+||.||++.. .++..+|+|.+.... ....++.+|++++.+ ||||++++
T Consensus 28 ~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~ 85 (291)
T cd06639 28 ETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFY 85 (291)
T ss_pred EEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 3789999999999997 467899999986432 224677888888876 99999864
No 320
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=94.96 E-value=0.032 Score=57.94 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=40.3
Q ss_pred ccCCceeeeeeee-cCCceEEEEeeccCCC-C-ChHHHHHHHHHHhc--CCCccccc
Q 008008 529 GKGGFGTVYHGYL-ADGSEVAIKMLSASSS-Q-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 529 G~g~fg~Vykg~l-~~g~~VAVK~l~~~~~-~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
|.++|+.||++.. .+|..||||+++.... . ..+.+.+|+++++. |||||+++
T Consensus 9 G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~ 65 (327)
T cd08227 9 GFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYR 65 (327)
T ss_pred cccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence 5558999999986 5788999999965422 2 23567789999998 99999875
No 321
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=94.95 E-value=0.011 Score=58.77 Aligned_cols=55 Identities=24% Similarity=0.332 Sum_probs=45.4
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCC-CChHHHHHHHHHHhc---CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSS-QGPKQFRTEVELIDY---YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~---H~NlV~l~~ 581 (581)
.||.|.||+|+|-.- +.|..+|||+++.... ...++|..|.+...+ -||||++++
T Consensus 71 ~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyG 130 (361)
T KOG1006|consen 71 EIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYG 130 (361)
T ss_pred HhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhh
Confidence 689999999999775 5788999999976543 556789999988776 999999864
No 322
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.91 E-value=0.0042 Score=68.10 Aligned_cols=54 Identities=22% Similarity=0.357 Sum_probs=44.4
Q ss_pred eeccCCceeeeeeeecC-CceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-GSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
-+|-|.||.|||+.-.+ +...|-|++.-.+....++|.-||++|+. ||+||.|+
T Consensus 39 ELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl 95 (1187)
T KOG0579|consen 39 ELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLL 95 (1187)
T ss_pred hhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHH
Confidence 46889999999998654 33456788866666678899999999998 99999986
No 323
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=94.76 E-value=0.044 Score=56.94 Aligned_cols=53 Identities=19% Similarity=0.322 Sum_probs=41.8
Q ss_pred eccCCceeeeeeee-cCCceEEEEeeccCCC--CChHHHHHHHHHHhc--CCCccccc
Q 008008 528 LGKGGFGTVYHGYL-ADGSEVAIKMLSASSS--QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 528 iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~--~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
-|.|+||.||.++. .+|..||||.+..... ...+.+.+|+.+++. |||||+++
T Consensus 8 ~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~ 65 (328)
T cd08226 8 RGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSW 65 (328)
T ss_pred CcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEe
Confidence 37789999999986 4789999999864322 224678899999887 99999864
No 324
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=94.74 E-value=0.043 Score=55.26 Aligned_cols=54 Identities=28% Similarity=0.266 Sum_probs=41.1
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCC-ChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQ-GPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||.|++|.||+|... ++..|+||++...... ......+|++.+++ |+||++++
T Consensus 6 ~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~ 64 (283)
T cd07830 6 QLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLK 64 (283)
T ss_pred eeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHH
Confidence 6899999999999985 4678999998654321 22345678888887 99998764
No 325
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=94.62 E-value=0.06 Score=59.99 Aligned_cols=56 Identities=25% Similarity=0.383 Sum_probs=43.8
Q ss_pred EEeeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc---CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
+.++|+|.||+|+.+.+. ++...|||.|++.. ....+..+.|-.++.- ||-|++|+
T Consensus 373 l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~ 435 (694)
T KOG0694|consen 373 LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLF 435 (694)
T ss_pred EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecc
Confidence 358999999999999985 56789999998653 3445667777766554 99999885
No 326
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=94.59 E-value=0.046 Score=53.93 Aligned_cols=54 Identities=24% Similarity=0.340 Sum_probs=43.4
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|++|.||++.. .++..+++|.+.... .....++.+|++++++ |+||++++
T Consensus 7 ~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~ 65 (256)
T cd08530 7 KLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYK 65 (256)
T ss_pred eecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhh
Confidence 689999999999875 467899999986432 2335678899999999 99999764
No 327
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=94.52 E-value=0.011 Score=64.90 Aligned_cols=54 Identities=31% Similarity=0.535 Sum_probs=42.3
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeecc----CCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSA----SSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~----~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
++|+|.|-+||||.- .+|..||--.++. .+....+.|..|+++|+. |+|||+++
T Consensus 47 vLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy 107 (632)
T KOG0584|consen 47 VLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFY 107 (632)
T ss_pred hcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeee
Confidence 789999999999996 3577887554432 122335789999999999 99999986
No 328
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=94.31 E-value=0.05 Score=55.90 Aligned_cols=52 Identities=15% Similarity=0.070 Sum_probs=40.4
Q ss_pred eccCCceeeeeeeecCCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 528 LGKGGFGTVYHGYLADGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 528 iG~g~fg~Vykg~l~~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.|.|+++.+|++.. ++..||||+++.. .....+.+..|++++++ |+||++++
T Consensus 10 ~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~ 65 (314)
T cd08216 10 FEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYV 65 (314)
T ss_pred hcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 46667777777765 6889999998643 23345789999999999 99999875
No 329
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=94.22 E-value=0.01 Score=53.55 Aligned_cols=68 Identities=24% Similarity=0.408 Sum_probs=58.8
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHHHh
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVA 516 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~ 516 (581)
+.++.|+|++|.++ .+|.++..++.|+.|++++|.|. ..|.-+.+|.+|..|+..+|... +||-.++-
T Consensus 77 ~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~ 144 (177)
T KOG4579|consen 77 PTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFY 144 (177)
T ss_pred chhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhc
Confidence 46888999999998 78999999999999999999998 67887888999999998888765 77776543
No 330
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=94.11 E-value=0.018 Score=62.63 Aligned_cols=47 Identities=26% Similarity=0.335 Sum_probs=39.3
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
-+|.|.=|.||.|+++ ++.||||+++... .+||+.|.+ |+||+.+++
T Consensus 131 WlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkG 179 (904)
T KOG4721|consen 131 WLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKG 179 (904)
T ss_pred hhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEee
Confidence 5799999999999998 4789999986432 367889999 999998863
No 331
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=94.09 E-value=0.025 Score=53.64 Aligned_cols=57 Identities=42% Similarity=0.597 Sum_probs=13.7
Q ss_pred ceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccc-cCCCccccccccCccC
Q 008008 447 KIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFL-SQLPLLRVLNLDGNKL 506 (581)
Q Consensus 447 ~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l-~~l~~L~~L~ls~N~l 506 (581)
++..|+|++|+++. +. .+..++.|+.|++++|.++ .++..+ ..+++|+.|+|++|++
T Consensus 43 ~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I 100 (175)
T PF14580_consen 43 KLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKI 100 (175)
T ss_dssp T--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS--
T ss_pred CCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcC
Confidence 34445555555442 21 3344444555555555554 232222 1344455555555544
No 332
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=94.01 E-value=0.025 Score=57.51 Aligned_cols=53 Identities=25% Similarity=0.390 Sum_probs=41.8
Q ss_pred eeccCCceeeeeeeecC-----CceEEEEeeccCCCC-C-hHHHHHHHHHHhc--CCCcccc
Q 008008 527 ILGKGGFGTVYHGYLAD-----GSEVAIKMLSASSSQ-G-PKQFRTEVELIDY--YKNLSPT 579 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-----g~~VAVK~l~~~~~~-~-~~ef~~Ei~~l~~--H~NlV~l 579 (581)
.||+|-+|.|||+.-.+ ...+|||+++..+.+ | ...-++||.+++. |||||+|
T Consensus 31 ~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~L 92 (438)
T KOG0666|consen 31 KIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISL 92 (438)
T ss_pred eecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhH
Confidence 68999999999996432 237899999755433 3 4678999999998 9999987
No 333
>PHA03210 serine/threonine kinase US3; Provisional
Probab=93.87 E-value=0.024 Score=63.05 Aligned_cols=54 Identities=19% Similarity=0.237 Sum_probs=35.9
Q ss_pred EeeccCCceeeeeeeecCC--ceEEEE------------------eeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLADG--SEVAIK------------------MLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g--~~VAVK------------------~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..||+|+||.||++.+... ...++| ++. ......++|.+|+++|++ |+|||+++
T Consensus 154 ~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~ 229 (501)
T PHA03210 154 DDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENILKIE 229 (501)
T ss_pred eEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCcCcEe
Confidence 4799999999998876421 122222 111 111224568899999999 99999875
No 334
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=93.83 E-value=0.016 Score=44.63 Aligned_cols=44 Identities=48% Similarity=0.694 Sum_probs=35.8
Q ss_pred cCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHH
Q 008008 470 KSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSL 514 (581)
Q Consensus 470 ~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l 514 (581)
++|+.|++++|+++.--+..+..+++|++|++++|++. .+|...
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~-~i~~~~ 44 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLT-SIPPDA 44 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSES-EEETTT
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccC-ccCHHH
Confidence 46899999999999444467788999999999999997 555544
No 335
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=93.64 E-value=0.081 Score=52.57 Aligned_cols=54 Identities=28% Similarity=0.297 Sum_probs=38.5
Q ss_pred eeccCCceeeeeeeecC-CceEEEEeeccC-----CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-GSEVAIKMLSAS-----SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~-----~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|+||.||++.... +..+++|.++.. ..+...++..|++++++ ||||++++
T Consensus 7 ~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 68 (260)
T cd08222 7 RLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFH 68 (260)
T ss_pred eecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHH
Confidence 68999999999998643 344555655432 22234567789999998 99999764
No 336
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=93.64 E-value=0.026 Score=61.81 Aligned_cols=62 Identities=32% Similarity=0.337 Sum_probs=45.1
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCC
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~ 507 (581)
..+..|+|+.|+++..-..++..|++|+.|+||.|.+...-++.+.-+++|++|+|++|+++
T Consensus 269 ~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~ 330 (873)
T KOG4194|consen 269 EKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRIT 330 (873)
T ss_pred cccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccc
Confidence 34667777777776433446677778888888888777666777777778888888888777
No 337
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=93.57 E-value=0.031 Score=57.05 Aligned_cols=54 Identities=24% Similarity=0.385 Sum_probs=44.6
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeeccCCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
++|+|.++.|--.. +..|..+|||.+.+..........+|++++.+ |+||++|+
T Consensus 85 ~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLi 142 (463)
T KOG0607|consen 85 LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLI 142 (463)
T ss_pred HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHH
Confidence 68999999986544 67889999999976644456778899999987 99999885
No 338
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=93.25 E-value=0.0095 Score=58.59 Aligned_cols=54 Identities=24% Similarity=0.304 Sum_probs=42.5
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeecc--CCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLSA--SSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~~--~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|.|+.||+-. -+.|+..|+|.++. -+..+.++..+|+.+..+ |||||+|+
T Consensus 18 ~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~ 76 (355)
T KOG0033|consen 18 ELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 76 (355)
T ss_pred HHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehh
Confidence 68999999999755 35677777777642 233467899999999888 99999985
No 339
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=93.24 E-value=0.035 Score=60.46 Aligned_cols=54 Identities=22% Similarity=0.375 Sum_probs=47.2
Q ss_pred eeccCCceeeeeeeecCCceEEEEeecc--CCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSA--SSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~--~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+||.+.|||..-.+.+.+|+|++.. ...+...-|.+||++|.+ |.+||+|+
T Consensus 368 ~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~ 426 (677)
T KOG0596|consen 368 QIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLY 426 (677)
T ss_pred hhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 7999999999999998888999998753 345667889999999999 99999986
No 340
>PTZ00284 protein kinase; Provisional
Probab=93.17 E-value=0.11 Score=57.02 Aligned_cols=46 Identities=20% Similarity=0.429 Sum_probs=34.7
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY 572 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~ 572 (581)
..||+|+||.||++.. ..+..||||+++... ...+++..|++++.+
T Consensus 135 ~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~ 181 (467)
T PTZ00284 135 SLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEK 181 (467)
T ss_pred EEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHH
Confidence 4799999999999986 457789999996432 234566777777766
No 341
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=93.13 E-value=0.05 Score=62.56 Aligned_cols=58 Identities=41% Similarity=0.587 Sum_probs=35.4
Q ss_pred eeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCC
Q 008008 448 IISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSG 508 (581)
Q Consensus 448 l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G 508 (581)
++.|+||+|.|+ .+|..+.++..|+.|...+|++. .+| ++.+++.|+.+|++.|+|+-
T Consensus 409 LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~ 466 (1081)
T KOG0618|consen 409 LEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSE 466 (1081)
T ss_pred hHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhh
Confidence 444555555554 45555555555555555555554 455 66777777777777777763
No 342
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=93.13 E-value=0.027 Score=34.08 Aligned_cols=19 Identities=68% Similarity=0.843 Sum_probs=11.4
Q ss_pred CCeEeCCCCCCCCCcccccc
Q 008008 472 LENLDLSNNSLTGSIPEFLS 491 (581)
Q Consensus 472 L~~L~Ls~N~l~G~iP~~l~ 491 (581)
|+.|||++|+++ .||+.++
T Consensus 2 L~~Ldls~n~l~-~ip~~~~ 20 (22)
T PF00560_consen 2 LEYLDLSGNNLT-SIPSSFS 20 (22)
T ss_dssp ESEEEETSSEES-EEGTTTT
T ss_pred ccEEECCCCcCE-eCChhhc
Confidence 556666666666 5665544
No 343
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=92.96 E-value=0.11 Score=60.39 Aligned_cols=62 Identities=31% Similarity=0.564 Sum_probs=47.9
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHH
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSL 514 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l 514 (581)
+.++.|+|++|.++ .+|..+ .+.|+.|+|++|+|+ .+|..+. ..|+.|++++|+|. .+|.++
T Consensus 346 ~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl 407 (754)
T PRK15370 346 PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESL 407 (754)
T ss_pred CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhH
Confidence 56888899999887 466655 367889999999988 6777654 36888999999988 677665
No 344
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=92.95 E-value=0.035 Score=56.20 Aligned_cols=59 Identities=31% Similarity=0.437 Sum_probs=37.0
Q ss_pred CCceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccC
Q 008008 445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKL 506 (581)
Q Consensus 445 ~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l 506 (581)
.|.+..|+||.|++.- + ..+..|.+|+.||||+|.|+ .+-..-.++-+.+.|.|+.|.+
T Consensus 306 ~Pkir~L~lS~N~i~~-v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~i 364 (490)
T KOG1259|consen 306 APKLRRLILSQNRIRT-V-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKI 364 (490)
T ss_pred ccceeEEeccccceee-e-hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhH
Confidence 4667777777777652 2 23666777777777777765 2322233455667777777754
No 345
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=92.87 E-value=0.041 Score=62.52 Aligned_cols=50 Identities=34% Similarity=0.450 Sum_probs=38.6
Q ss_pred eeccCCce-eeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFG-TVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg-~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
++|.|.-| .||+|.++ |+.||||++-.. ...--.+||+.|.. |||||+.+
T Consensus 516 ilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyy 569 (903)
T KOG1027|consen 516 ILGYGSNGTVVFRGVYE-GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYY 569 (903)
T ss_pred HcccCCCCcEEEEEeeC-CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEE
Confidence 67888877 57999997 679999999321 11223699999988 99999875
No 346
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=92.86 E-value=0.081 Score=57.17 Aligned_cols=54 Identities=24% Similarity=0.401 Sum_probs=42.0
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeeccCCCC--ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLSASSSQ--GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~~~~--~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
-+|+|.|..|-.++ .=.|..||||++...... ...+...|+.-|+- |||||+|+
T Consensus 25 TlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLY 83 (864)
T KOG4717|consen 25 TLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLY 83 (864)
T ss_pred hhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeee
Confidence 58999998887666 346899999999765433 34677788887776 99999986
No 347
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=92.85 E-value=0.018 Score=66.12 Aligned_cols=63 Identities=33% Similarity=0.521 Sum_probs=41.0
Q ss_pred CceeEeecCCCCCceecch-hhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCc
Q 008008 446 PKIISLNLTSEGLTGKISP-SLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVP 511 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~-~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP 511 (581)
.++..|+|+.|.|. .+|. .+.++..|+.|+||+|.|+ .+|..+..+..|++|..-+|++. .+|
T Consensus 383 ~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP 446 (1081)
T KOG0618|consen 383 KHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP 446 (1081)
T ss_pred cceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech
Confidence 35666777777665 4444 3556666777777777776 66677777777777776666665 445
No 348
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=92.62 E-value=0.06 Score=54.43 Aligned_cols=53 Identities=23% Similarity=0.374 Sum_probs=44.8
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
.+|+|++|.|||+.- +.|..||||++-.. ...+|...||.++.+ .|++|+.++
T Consensus 40 KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYG 95 (502)
T KOG0574|consen 40 KLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYG 95 (502)
T ss_pred HhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhh
Confidence 579999999999985 56889999998543 357899999999999 899998763
No 349
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=92.58 E-value=0.071 Score=63.39 Aligned_cols=55 Identities=29% Similarity=0.438 Sum_probs=46.5
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeec--cCCCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLS--ASSSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~--~~~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
.||.|-||.||-+. +++|...|+|.++ +......+...+|+.+|.. |||||+.++
T Consensus 1242 ~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyG 1301 (1509)
T KOG4645|consen 1242 FIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYG 1301 (1509)
T ss_pred ccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCc
Confidence 79999999999877 6788999999875 3344567889999999999 999998764
No 350
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=92.57 E-value=0.11 Score=49.24 Aligned_cols=62 Identities=42% Similarity=0.621 Sum_probs=31.1
Q ss_pred CCceeEeecCCCCCceecchhh-hcccCCCeEeCCCCCCCCCc-cccccCCCccccccccCccCC
Q 008008 445 PPKIISLNLTSEGLTGKISPSL-SNLKSLENLDLSNNSLTGSI-PEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 445 ~~~l~~l~Ls~n~l~G~ip~~l-~~l~~L~~L~Ls~N~l~G~i-P~~l~~l~~L~~L~ls~N~l~ 507 (581)
..++..|+|++|.++ .+...+ ..+++|+.|+|++|++...- =..+..++.|+.|+|.+|.++
T Consensus 63 L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 63 LPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred hhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 367999999999998 455555 46899999999999996421 145678899999999999886
No 351
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=92.53 E-value=0.063 Score=55.28 Aligned_cols=63 Identities=30% Similarity=0.452 Sum_probs=43.8
Q ss_pred ceeEeecCCCCCce----ecchhhhcc-cCCCeEeCCCCCCCCC----ccccccCCCccccccccCccCCCC
Q 008008 447 KIISLNLTSEGLTG----KISPSLSNL-KSLENLDLSNNSLTGS----IPEFLSQLPLLRVLNLDGNKLSGS 509 (581)
Q Consensus 447 ~l~~l~Ls~n~l~G----~ip~~l~~l-~~L~~L~Ls~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~ 509 (581)
.++.|++++|.+++ .+...+..+ +.|+.|+|++|.+++. ++..+..+..|+.|++++|++++.
T Consensus 109 ~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 180 (319)
T cd00116 109 SLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDA 180 (319)
T ss_pred cccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchH
Confidence 47888888887763 233445566 7788888888888753 334455667788888888888753
No 352
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=92.34 E-value=0.12 Score=55.48 Aligned_cols=56 Identities=20% Similarity=0.300 Sum_probs=41.8
Q ss_pred EEeeccCCceeeeeeee-cCCceEEEEeeccC--CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYL-ADGSEVAIKMLSAS--SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~--~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
++.+|+|+||.++..+- .++..+++|.+... +....+.-..|+++|++ |||||..+
T Consensus 9 ~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ 69 (426)
T KOG0589|consen 9 LRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYK 69 (426)
T ss_pred hhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeec
Confidence 45799999998875442 35678999988643 23334567899999999 99999753
No 353
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=92.33 E-value=0.21 Score=49.52 Aligned_cols=53 Identities=9% Similarity=0.060 Sum_probs=40.2
Q ss_pred EeeccCCceeeeeeeecCCceEEEEeeccCCCCChH---------HHHHHHHHHhc--CCCcccc
Q 008008 526 RILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPK---------QFRTEVELIDY--YKNLSPT 579 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~---------ef~~Ei~~l~~--H~NlV~l 579 (581)
+++|.|+||.||.... ++..+|||.+++......+ .|.+|++.+.+ |++|...
T Consensus 37 ~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~ 100 (232)
T PRK10359 37 KVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASL 100 (232)
T ss_pred EEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcc
Confidence 4799999999998655 5668999999754332222 26899999998 9998754
No 354
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=92.19 E-value=0.074 Score=54.72 Aligned_cols=70 Identities=36% Similarity=0.497 Sum_probs=48.9
Q ss_pred CceeEeecCCCCCcee----cchhhhcccCCCeEeCCCCCCCCC----ccccccCCCccccccccCccCCCCCchHHH
Q 008008 446 PKIISLNLTSEGLTGK----ISPSLSNLKSLENLDLSNNSLTGS----IPEFLSQLPLLRVLNLDGNKLSGSVPTSLV 515 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~----ip~~l~~l~~L~~L~Ls~N~l~G~----iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~ 515 (581)
..++.|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++..+..+++|+.|++++|.+++..+..+.
T Consensus 165 ~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~ 242 (319)
T cd00116 165 RDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALA 242 (319)
T ss_pred CCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHH
Confidence 3577888888888742 344455667888888888888643 344556678888888888888764444443
No 355
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=91.98 E-value=0.16 Score=58.93 Aligned_cols=64 Identities=30% Similarity=0.362 Sum_probs=46.8
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHHHhhc
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARS 518 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~~~ 518 (581)
..+..|+|++|.|++ +|.. .+.|+.|++++|+|+ .+|... ..|+.|+|++|+++ .||..+....
T Consensus 382 ~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~ 445 (788)
T PRK15387 382 SGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLS 445 (788)
T ss_pred cccceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhcc
Confidence 357778888888874 5543 356888899999887 477543 46788899999987 7898876543
No 356
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=91.93 E-value=0.16 Score=62.27 Aligned_cols=64 Identities=28% Similarity=0.337 Sum_probs=30.4
Q ss_pred ceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCc
Q 008008 447 KIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVP 511 (581)
Q Consensus 447 ~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP 511 (581)
.++.|+|+++..-..+|..+.++++|+.|+++++..-+.+|..+ ++++|+.|++++|..-+.+|
T Consensus 658 ~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p 721 (1153)
T PLN03210 658 NLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFP 721 (1153)
T ss_pred cccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccc
Confidence 34445554444334455555555555555555544334445433 44555555555543333333
No 357
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=91.92 E-value=0.18 Score=58.71 Aligned_cols=61 Identities=36% Similarity=0.549 Sum_probs=34.2
Q ss_pred ceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHH
Q 008008 447 KIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSL 514 (581)
Q Consensus 447 ~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l 514 (581)
.+..|+|++|.|+ .+|..+. ..|+.|+|++|++. .+|..+. ..|+.|++++|+++ .+|..+
T Consensus 221 nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l 281 (754)
T PRK15370 221 NIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENL 281 (754)
T ss_pred CCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-cccccc
Confidence 3555555555555 3444332 24666666666665 5555443 35777777777776 455443
No 358
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=91.61 E-value=0.084 Score=57.44 Aligned_cols=55 Identities=33% Similarity=0.435 Sum_probs=41.8
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccC---CCCChHHHHHHHHHHhc---CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSAS---SSQGPKQFRTEVELIDY---YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~---H~NlV~l~~ 581 (581)
++|+|+|++|+++.- ..++.+|||++... .++..+-...|=++|.+ ||-||+|+|
T Consensus 80 ~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~ 141 (604)
T KOG0592|consen 80 ILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYF 141 (604)
T ss_pred eeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEE
Confidence 899999999999984 56789999999643 22333445566666666 999999975
No 359
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=91.56 E-value=0.2 Score=61.51 Aligned_cols=58 Identities=28% Similarity=0.393 Sum_probs=44.5
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCc
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGN 504 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N 504 (581)
+.++.|+|++|...+.+|..+++|++|+.|+|++|..-+.+|..+ .+++|+.|++++|
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c 835 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGC 835 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCC
Confidence 568888999888888899999999999999999876666777654 4555555555544
No 360
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=91.48 E-value=0.062 Score=56.96 Aligned_cols=54 Identities=26% Similarity=0.448 Sum_probs=41.4
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeec--cCCCCC-----hHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLS--ASSSQG-----PKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~--~~~~~~-----~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
++|+|||+.|||+. +...+-||||.-. ...... .+.-.+|-.+.+. ||.||+++
T Consensus 470 LLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlY 533 (775)
T KOG1151|consen 470 LLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLY 533 (775)
T ss_pred HhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeee
Confidence 79999999999998 5667889999753 322222 2456788888888 99999985
No 361
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=91.35 E-value=0.094 Score=56.15 Aligned_cols=64 Identities=39% Similarity=0.662 Sum_probs=41.4
Q ss_pred ceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchH
Q 008008 447 KIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTS 513 (581)
Q Consensus 447 ~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~ 513 (581)
.++.|+++.|.+. .+|..+..++.|+.|++++|+++ .+|...+.++.|+.|++++|++. .+|..
T Consensus 141 nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~ 204 (394)
T COG4886 141 NLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPE 204 (394)
T ss_pred hcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchh
Confidence 4666677776665 45556667777777777777776 56665556666777777777665 45543
No 362
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=91.14 E-value=0.29 Score=54.38 Aligned_cols=47 Identities=34% Similarity=0.588 Sum_probs=35.3
Q ss_pred EEeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc
Q 008008 525 LRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY 572 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~ 572 (581)
+.+||+|.||.|.|+.- ..++.||||.++.... -..+=..||.+|..
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ 238 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILEL 238 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHH
Confidence 34899999999999985 4588999999975421 23445678877776
No 363
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=91.14 E-value=0.15 Score=60.36 Aligned_cols=60 Identities=30% Similarity=0.425 Sum_probs=39.6
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccC
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKL 506 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l 506 (581)
+.+..|||++|.--+.+|..++.|-+|++|+|+...++ .+|..+.+|..|.+||+..+..
T Consensus 571 ~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~ 630 (889)
T KOG4658|consen 571 PLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGR 630 (889)
T ss_pred cceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccc
Confidence 55666666665555566667777777777777766666 6666666666666666665543
No 364
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=91.01 E-value=0.31 Score=56.01 Aligned_cols=55 Identities=24% Similarity=0.515 Sum_probs=43.4
Q ss_pred EeeccCCceeeeeee-ecCCceEEEEeeccCCCCChHHHHHHHHHHhc---CCCcccccC
Q 008008 526 RILGKGGFGTVYHGY-LADGSEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTYF 581 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~~ 581 (581)
..||+|-.|.||+++ .++++.+|||.+... ....+|-..|.++|.. |||++.+++
T Consensus 25 evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg 83 (953)
T KOG0587|consen 25 EVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYG 83 (953)
T ss_pred EEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEE
Confidence 389999999999998 578889999998654 3345666777777776 999998764
No 365
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=90.81 E-value=0.031 Score=55.28 Aligned_cols=54 Identities=24% Similarity=0.473 Sum_probs=41.2
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeec-cCCCCC-hHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLS-ASSSQG-PKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~-~~~~~~-~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.||+|-||.|++++-. .|..||+|+.- +....| ...-.+|+++|.. |+|++.|+
T Consensus 24 kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nli 82 (376)
T KOG0669|consen 24 KIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLI 82 (376)
T ss_pred hcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHH
Confidence 6899999999999975 46778987653 333334 3456889999999 99998764
No 366
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=90.80 E-value=0.19 Score=55.22 Aligned_cols=56 Identities=23% Similarity=0.372 Sum_probs=41.0
Q ss_pred EEeeccCCceeeeeeeecC-CceEEEEeeccCC--------CCChHHHHHHHHHHhc-----CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYLAD-GSEVAIKMLSASS--------SQGPKQFRTEVELIDY-----YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~~--------~~~~~ef~~Ei~~l~~-----H~NlV~l~ 580 (581)
+..+|+|+||.|..+.-.. .-.|+||.+.+.. .......-.||++|+. |+||++++
T Consensus 566 lq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 566 LQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLL 635 (772)
T ss_pred eeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhh
Confidence 3478999999999988754 4589999885432 1112345578988886 99999986
No 367
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=90.52 E-value=0.37 Score=46.26 Aligned_cols=28 Identities=32% Similarity=0.426 Sum_probs=25.4
Q ss_pred eeccCCceeeeeeeecCCceEEEEeecc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSA 554 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~ 554 (581)
.||+|+||.||++...+|+.||||+...
T Consensus 22 ~i~~G~~g~Vy~~~~~~g~~vavK~~~~ 49 (198)
T cd05144 22 QIGVGKESDVYLALDPDGNPVALKFHRL 49 (198)
T ss_pred ccccCcceEEEEEEcCCCCEEEEEEEec
Confidence 6899999999999988899999998754
No 368
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=90.43 E-value=0.22 Score=54.86 Aligned_cols=62 Identities=31% Similarity=0.411 Sum_probs=44.3
Q ss_pred CCceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCC
Q 008008 445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 445 ~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~ 507 (581)
++....|++++|.|+-.-+..|.++++|+.++|..|.|+ .||........|+.|+|.+|.++
T Consensus 77 p~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~ 138 (873)
T KOG4194|consen 77 PSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLIS 138 (873)
T ss_pred ccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccc
Confidence 456778888888887555667778888888888888776 67766555555666666666554
No 369
>PHA02882 putative serine/threonine kinase; Provisional
Probab=90.37 E-value=0.46 Score=48.45 Aligned_cols=26 Identities=35% Similarity=0.653 Sum_probs=20.2
Q ss_pred eeccCCceeeeeeeecCC----ceEEEEee
Q 008008 527 ILGKGGFGTVYHGYLADG----SEVAIKML 552 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g----~~VAVK~l 552 (581)
.||+|+||.||+|...+. ..+|+|..
T Consensus 19 ~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~ 48 (294)
T PHA02882 19 LIGCGGFGCVYETQCASDHCINNQAVAKIE 48 (294)
T ss_pred EEecCCCceEEEEEEcCCcccccceEEEec
Confidence 789999999999997543 45666654
No 370
>smart00090 RIO RIO-like kinase.
Probab=90.20 E-value=0.38 Score=47.97 Aligned_cols=29 Identities=28% Similarity=0.458 Sum_probs=25.7
Q ss_pred eeccCCceeeeeee--ecCCceEEEEeeccC
Q 008008 527 ILGKGGFGTVYHGY--LADGSEVAIKMLSAS 555 (581)
Q Consensus 527 ~iG~g~fg~Vykg~--l~~g~~VAVK~l~~~ 555 (581)
.||+|++|.||+|. ..+|..||||.++..
T Consensus 35 ~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~ 65 (237)
T smart00090 35 CISTGKEANVYHALDFDGSGKERAVKIYRTG 65 (237)
T ss_pred eeccCcceeEEEEEecCCCCcEEEEEEEEcC
Confidence 78999999999998 678999999988643
No 371
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=89.81 E-value=0.37 Score=52.60 Aligned_cols=42 Identities=29% Similarity=0.425 Sum_probs=33.5
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHh
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELID 571 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~ 571 (581)
.+|.|++|.||+|++.+|+.||||..++.. .+.+..++.+|.
T Consensus 124 plasaSigQVh~A~l~~G~~VaVKv~rp~i---~~~i~~Dl~~l~ 165 (437)
T TIGR01982 124 PLAAASIAQVHRARLVDGKEVAVKVLRPGI---EKTIAADIALLY 165 (437)
T ss_pred ceeeeehhheEEEEecCCCEEEEEeeCCCc---HHHHHHHHHHHH
Confidence 589999999999999999999999997542 345666665544
No 372
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=89.60 E-value=0.18 Score=51.22 Aligned_cols=56 Identities=23% Similarity=0.266 Sum_probs=44.4
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCCC---CChHHHHHHHHHHhc--CCCcccccC
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASSS---QGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~---~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
..+|.|.||.|...+.. +|...|.|+|+.... ...++-.+|..+|+. ||.||.|.+
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~ 111 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYG 111 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEE
Confidence 47899999999988864 577899999975432 223567899999999 999998863
No 373
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=89.59 E-value=0.13 Score=51.41 Aligned_cols=54 Identities=22% Similarity=0.306 Sum_probs=42.9
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
-||-|.||.||...- ++|+.||.|++-... -...+.+.+|+++|+- |.|+.+++
T Consensus 60 PIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaL 118 (449)
T KOG0664|consen 60 PIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLL 118 (449)
T ss_pred cccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHH
Confidence 689999999998875 578999999984321 1234778999999998 99998754
No 374
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=89.05 E-value=0.18 Score=44.72 Aligned_cols=41 Identities=24% Similarity=0.416 Sum_probs=31.6
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHH
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELI 570 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l 570 (581)
-++.++.|.||+|++.+|+.||||..++.-. +.+..++.+|
T Consensus 18 PlasASiaQVh~a~l~~g~~VaVKV~rP~i~---~~i~~Dl~~l 58 (119)
T PF03109_consen 18 PLASASIAQVHRARLKDGEEVAVKVQRPGIE---EQIEADLRIL 58 (119)
T ss_pred hhhheehhhheeeeecccchhhhhhcchHHH---HHHHHHHHHH
Confidence 5799999999999999999999999976532 3344444444
No 375
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms]
Probab=88.37 E-value=0.91 Score=45.66 Aligned_cols=147 Identities=17% Similarity=0.127 Sum_probs=82.9
Q ss_pred eeeEEeeecCCCC---CccccCCCCCCCCccCCCCCCCCCeeeecceeeeccCCCCCCchHHHHHhcccCCCCCcceEEE
Q 008008 228 LVLYRRLDVGSTT---TQIIRFKDDHYDRIWVPYPGFPGSASINTSFIIDSLVDSQYRLPSAVMKTAVKPMNVNDSLDFD 304 (581)
Q Consensus 228 l~~~~Rin~G~~~---~~~ir~~~D~~dR~W~~d~~~~~~~~~st~~~i~~~~~~~~~~P~~Vy~TA~~~~~~~~~~~~t 304 (581)
...++-+||||++ ...|+|..|+.-- ++-..+++ ..+. + ....+.--...|||+|.... .| .
T Consensus 58 ~svI~aVncGgdaavd~ygI~f~aD~~~~--VGrasd~G-~~l~----i---~~raeeed~ily~ter~nee---tF--g 122 (355)
T KOG3593|consen 58 SSVIPAVNCGGDAAVDNYGIRFAADPLEG--VGRASDYG-MVLG----I---GCRAEEEDIILYQTERYNEE---TF--G 122 (355)
T ss_pred hhhhheeccCChhhhcccceEeecccccc--ccccCCcc-ceee----c---cccCChhhhhhhhhcccchh---hh--c
Confidence 4568899999975 3577887776432 11110111 1111 1 11223345678999998643 23 3
Q ss_pred Ee-cCCCCccEEEEEEeeeccccCCCCeEEEEEEEC-CEEeccc---ccc---cceeeeeEEe-------------eecC
Q 008008 305 FE-IGDPTLQFYVYMHFAELESRQGNQYREFSIELN-GNLWEKS---VVP---EYLQSKTISS-------------TQPA 363 (581)
Q Consensus 305 ~~-~~~~~~~y~vrLhF~ei~~~~~~~~R~F~V~in-g~~~~~~---~~p---~~~~~~~v~~-------------~~~~ 363 (581)
++ +.+..++|-+.|-|||..-... |..+|+|-+| +..+.+. |.. .-...|.++. +...
T Consensus 123 yd~pik~dgdyalvlkfaevyF~~~-q~kvfdvrln~sh~vVk~ldi~~~vg~rg~AhDe~i~~~i~~gkls~~gess~~ 201 (355)
T KOG3593|consen 123 YDVPIKEDGDYALVLKFAEVYFKTC-QHKVFDVRLNCSHCVVKALDIFDQVGDRGKAHDEIIPCLIGQGKLSVCGESSIS 201 (355)
T ss_pred ccccccCCCceehhhhHHHHHHHhh-hhhheeeeeccceeEEeccchhhhcCCCcccccceEEEEEcCceEEEEeeeEEe
Confidence 44 3355699999999999874434 4499999999 6555432 110 0001111110 1112
Q ss_pred CCCeEEEEEeecCCCCcChHHHHHHhhhh
Q 008008 364 RGSKLNFSLCKTSNSTLPPILNAIEIYIL 392 (581)
Q Consensus 364 ~~~~~~isl~~t~~s~lp~~ln~le~~~l 392 (581)
.-|.++|.+.+..--+ |.+|+..++.-
T Consensus 202 t~gkl~le~~kg~ldn--pk~~a~aIl~g 228 (355)
T KOG3593|consen 202 TLGKLNLEFLKGVLDN--PKDCARAILVG 228 (355)
T ss_pred ecceEEEEeecccCCC--hhhhhHHHhhc
Confidence 3367788887765443 88888877764
No 376
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=88.25 E-value=0.19 Score=55.15 Aligned_cols=66 Identities=27% Similarity=0.450 Sum_probs=51.4
Q ss_pred eeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHHHhh
Q 008008 448 IISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVAR 517 (581)
Q Consensus 448 l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~~ 517 (581)
+..|++..|++. .+|++++. -.|..||+|.|+++ .||-++.+|..|++|-|.+|-|. +-|..|+.+
T Consensus 191 lr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~k 256 (722)
T KOG0532|consen 191 LRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEK 256 (722)
T ss_pred HHHHHHhhhhhh-hCCHHHhC-CceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhc
Confidence 445566677765 57788873 45788999999998 89999999999999999999998 446666544
No 377
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=88.02 E-value=0.25 Score=50.21 Aligned_cols=59 Identities=24% Similarity=0.282 Sum_probs=35.3
Q ss_pred CCceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccC
Q 008008 445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKL 506 (581)
Q Consensus 445 ~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l 506 (581)
.+.++.|+||+|.|+ .+-..-..|.+++.|.|+.|.+.. -+.+.++-+|..||+.+|++
T Consensus 328 L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~I 386 (490)
T KOG1259|consen 328 LPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQI 386 (490)
T ss_pred cccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccch
Confidence 456677777777765 222233455666677777775531 12355666777777777766
No 378
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=87.76 E-value=0.09 Score=59.11 Aligned_cols=61 Identities=38% Similarity=0.475 Sum_probs=46.2
Q ss_pred CCceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccc----------------------cccCCCcccccccc
Q 008008 445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPE----------------------FLSQLPLLRVLNLD 502 (581)
Q Consensus 445 ~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~----------------------~l~~l~~L~~L~ls 502 (581)
.+.+..|||+.|.++- + ..+..|+.|++|||+.|.|. .+|. .+.+|.+|..|||+
T Consensus 186 l~ale~LnLshNk~~~-v-~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lrnN~l~tL~gie~LksL~~LDls 262 (1096)
T KOG1859|consen 186 LPALESLNLSHNKFTK-V-DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLRNNALTTLRGIENLKSLYGLDLS 262 (1096)
T ss_pred HHHhhhhccchhhhhh-h-HHHHhcccccccccccchhc-cccccchhhhhheeeeecccHHHhhhhHHhhhhhhccchh
Confidence 4668889999999873 2 27888899999999999886 4543 24456678888888
Q ss_pred CccCCC
Q 008008 503 GNKLSG 508 (581)
Q Consensus 503 ~N~l~G 508 (581)
+|-+.+
T Consensus 263 yNll~~ 268 (1096)
T KOG1859|consen 263 YNLLSE 268 (1096)
T ss_pred Hhhhhc
Confidence 887765
No 379
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=87.75 E-value=0.67 Score=49.14 Aligned_cols=54 Identities=31% Similarity=0.387 Sum_probs=44.0
Q ss_pred eeccCCceeeeeeeecC-CceEEEEeeccCC---CCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD-GSEVAIKMLSASS---SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|+|..|+||.+++.+ +...|+|++.... .......+.|-++|+. ||-|+.|+
T Consensus 84 ~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLY 143 (459)
T KOG0610|consen 84 RLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLY 143 (459)
T ss_pred HcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhh
Confidence 68999999999999975 4789999996543 3344567888899998 99999886
No 380
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=87.72 E-value=0.08 Score=57.96 Aligned_cols=70 Identities=27% Similarity=0.473 Sum_probs=56.1
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHHHhhcc
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVARSQ 519 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~~~~ 519 (581)
+.+..|+.+.|.+. .+|+.++.|.+|+.|++..|++. .+|.+++.| .|..||+++|+++ .||..+.+..+
T Consensus 166 ~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis-~iPv~fr~m~~ 235 (722)
T KOG0532|consen 166 PTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS-YLPVDFRKMRH 235 (722)
T ss_pred hhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee-ecchhhhhhhh
Confidence 45677788888876 67888888888888888888887 788888844 5888999999988 89988766543
No 381
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=87.70 E-value=0.12 Score=57.46 Aligned_cols=56 Identities=20% Similarity=0.387 Sum_probs=45.3
Q ss_pred EEeeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+..+|.|.+|.|||++- ..+...|||.++.......+-.+.||-++.. |+|||.++
T Consensus 20 lqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~ 78 (829)
T KOG0576|consen 20 LQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYF 78 (829)
T ss_pred eeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHH
Confidence 34789999999999994 5678899999876555556667788888887 99999875
No 382
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=87.27 E-value=0.77 Score=46.02 Aligned_cols=50 Identities=20% Similarity=0.151 Sum_probs=34.7
Q ss_pred eccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc-CCCccccc
Q 008008 528 LGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY-YKNLSPTY 580 (581)
Q Consensus 528 iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~-H~NlV~l~ 580 (581)
+|+|+||.||++.- .++..+|+|..+.... .+...++..+.+ |+||++++
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~---~~~e~~~~~~~~~h~~iv~~~ 75 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNF---NAIEPMVHQLMKDNPNFIKLY 75 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhc---chhhHHHHHHhhcCCCEEEEE
Confidence 69999999999886 4677899999864321 122223333445 99999875
No 383
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=86.73 E-value=0.92 Score=50.88 Aligned_cols=51 Identities=18% Similarity=0.270 Sum_probs=35.2
Q ss_pred eeccCCceeeeeeeecCCceEEEEe-eccCCC-------CChHHHHHHHHHHhc--CCCccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKM-LSASSS-------QGPKQFRTEVELIDY--YKNLSP 578 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~-l~~~~~-------~~~~ef~~Ei~~l~~--H~NlV~ 578 (581)
.||+|+||.||+|.+.+.. +++|+ ...... ...+.+.+|++++.+ |++++.
T Consensus 340 ~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 400 (535)
T PRK09605 340 LIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPT 400 (535)
T ss_pred eeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCe
Confidence 6899999999999986554 44443 221111 112568899999999 888764
No 384
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=86.41 E-value=0.47 Score=50.74 Aligned_cols=65 Identities=40% Similarity=0.626 Sum_probs=56.2
Q ss_pred CceeEeecCCCCCceecchhhhccc-CCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchH
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLK-SLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTS 513 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~-~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~ 513 (581)
..++.|++.+|.++ .||+....+. +|+.|++++|++. .+|..+..++.|+.|++++|+++ .+|..
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~ 181 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKL 181 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhh
Confidence 35888999999987 7888888885 9999999999998 77778899999999999999998 56654
No 385
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=85.95 E-value=0.17 Score=53.15 Aligned_cols=63 Identities=24% Similarity=0.317 Sum_probs=37.1
Q ss_pred CCceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCC
Q 008008 445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 445 ~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~ 507 (581)
+++++.|+|++|.+++.=+..|..+..++.|.|..|++.----..+-.+..|+.|+|.+|+++
T Consensus 273 L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it 335 (498)
T KOG4237|consen 273 LPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQIT 335 (498)
T ss_pred cccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeE
Confidence 577888888888887554555656666666666555553211222334555555555555554
No 386
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=84.60 E-value=1.6 Score=38.49 Aligned_cols=43 Identities=19% Similarity=0.212 Sum_probs=35.3
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY 572 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~ 572 (581)
.+|.|.++.||++...+ ..++||....... ..++..|++++.+
T Consensus 5 ~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~ 47 (155)
T cd05120 5 LLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQL 47 (155)
T ss_pred ecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHH
Confidence 58999999999999865 7899999865433 5679999999888
No 387
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=84.00 E-value=0.45 Score=28.68 Aligned_cols=22 Identities=41% Similarity=0.576 Sum_probs=17.7
Q ss_pred ceeEeecCCCCCceecchhhhcc
Q 008008 447 KIISLNLTSEGLTGKISPSLSNL 469 (581)
Q Consensus 447 ~l~~l~Ls~n~l~G~ip~~l~~l 469 (581)
+++.|+|++|+++ .||++|++|
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~~l 22 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFSNL 22 (22)
T ss_dssp TESEEEETSSEES-EEGTTTTT-
T ss_pred CccEEECCCCcCE-eCChhhcCC
Confidence 3788999999999 899887654
No 388
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=83.73 E-value=0.88 Score=50.98 Aligned_cols=54 Identities=28% Similarity=0.407 Sum_probs=42.7
Q ss_pred eeccCCceeeeeee-ecCCceEEEEeeccCCC---CChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKMLSASSS---QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~~~---~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
-+|+|+-|.|-.|+ .+.|+.+|||.+..... .......+||-+|+- |||+++|+
T Consensus 19 TLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~Ly 78 (786)
T KOG0588|consen 19 TLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLY 78 (786)
T ss_pred cccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeee
Confidence 57999999999888 46799999999864422 224567889988887 99999886
No 389
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=83.11 E-value=2.4 Score=42.18 Aligned_cols=31 Identities=45% Similarity=0.861 Sum_probs=26.4
Q ss_pred EEeeccCCceeeeeee-ecCCceEEEEeeccC
Q 008008 525 LRILGKGGFGTVYHGY-LADGSEVAIKMLSAS 555 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~-l~~g~~VAVK~l~~~ 555 (581)
++.||.|+||.+|.|. +.+|..||||.=+..
T Consensus 20 vrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~ 51 (341)
T KOG1163|consen 20 VRKIGSGSFGDIYLGISITSGEEVAIKLESSK 51 (341)
T ss_pred EEeecCCchhheeeeeeccCCceEEEEeeccc
Confidence 3589999999999998 678999999986543
No 390
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=81.95 E-value=0.83 Score=25.75 Aligned_cols=13 Identities=69% Similarity=0.887 Sum_probs=5.8
Q ss_pred CCCeEeCCCCCCC
Q 008008 471 SLENLDLSNNSLT 483 (581)
Q Consensus 471 ~L~~L~Ls~N~l~ 483 (581)
+|+.|+|++|+|+
T Consensus 2 ~L~~L~l~~n~L~ 14 (17)
T PF13504_consen 2 NLRTLDLSNNRLT 14 (17)
T ss_dssp T-SEEEETSS--S
T ss_pred ccCEEECCCCCCC
Confidence 4556666666554
No 391
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=81.57 E-value=0.82 Score=48.43 Aligned_cols=52 Identities=23% Similarity=0.392 Sum_probs=42.6
Q ss_pred eeccCCceeeeeeeecC----CceEEEEeeccCCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD----GSEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~----g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.||+|.|+.||++.+.. ...||+|.+... .......+|+++|.. |.||+.+.
T Consensus 43 kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~ 101 (418)
T KOG1167|consen 43 KIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLN 101 (418)
T ss_pred cccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcch
Confidence 79999999999999743 568999998654 334568899999998 99998875
No 392
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=81.17 E-value=0.41 Score=51.27 Aligned_cols=56 Identities=27% Similarity=0.384 Sum_probs=44.6
Q ss_pred EEeeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+++|+||||.||..+.. .|...|.|+|... ..++...-.+|-++|.+ -+-||+|-
T Consensus 190 ~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVsla 251 (591)
T KOG0986|consen 190 YRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLA 251 (591)
T ss_pred eEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEe
Confidence 459999999999987764 5788999988543 35677778899999999 77788764
No 393
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=80.65 E-value=2 Score=48.55 Aligned_cols=29 Identities=31% Similarity=0.627 Sum_probs=24.8
Q ss_pred EeeccCCceeeeeeeecC-----CceEEEEeecc
Q 008008 526 RILGKGGFGTVYHGYLAD-----GSEVAIKMLSA 554 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~-----g~~VAVK~l~~ 554 (581)
..||+|+||.||+|...+ +..||||+++.
T Consensus 138 ~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~ 171 (566)
T PLN03225 138 KKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATE 171 (566)
T ss_pred EEEeeCCCeEEEEEEEcCCccccCcEEEEEEecc
Confidence 479999999999999854 67999999864
No 394
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=80.64 E-value=2.4 Score=47.54 Aligned_cols=29 Identities=31% Similarity=0.444 Sum_probs=26.6
Q ss_pred eeccCCceeeeeeeecC-CceEEEEeeccC
Q 008008 527 ILGKGGFGTVYHGYLAD-GSEVAIKMLSAS 555 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~ 555 (581)
-+|.|++|.||+|++.+ |+.||||++++.
T Consensus 126 PlasaSiaQVh~A~l~~~G~~VAVKV~rP~ 155 (537)
T PRK04750 126 PLASASIAQVHFARLKDNGREVVVKVLRPD 155 (537)
T ss_pred hhcCCCccEEEEEEECCCCCEEEEEEeCcc
Confidence 68999999999999987 999999999764
No 395
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=79.66 E-value=1.3 Score=52.53 Aligned_cols=71 Identities=32% Similarity=0.385 Sum_probs=57.4
Q ss_pred CceeEeecCCCCC-ceecch-hhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchHHHhh
Q 008008 446 PKIISLNLTSEGL-TGKISP-SLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTSLVAR 517 (581)
Q Consensus 446 ~~l~~l~Ls~n~l-~G~ip~-~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~l~~~ 517 (581)
+.+++|-+..|.. -..++. .|..++.|+.|||++|.=-+.+|.+++.|-+|++|+|+...+. .+|.++...
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~L 617 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNL 617 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHH
Confidence 4577777777752 223444 3777999999999998888899999999999999999999988 899887554
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=79.21 E-value=1.5 Score=42.60 Aligned_cols=55 Identities=25% Similarity=0.335 Sum_probs=44.0
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccC-CCCChHHHHHHHHHHhc---CCCcccccC
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSAS-SSQGPKQFRTEVELIDY---YKNLSPTYF 581 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~-~~~~~~ef~~Ei~~l~~---H~NlV~l~~ 581 (581)
-+|+|++|.|-|-+. .+|+.+|||++... ..|..+...+|+++..+ .|-+|.+++
T Consensus 53 elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyG 112 (282)
T KOG0984|consen 53 ELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYG 112 (282)
T ss_pred hhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeeh
Confidence 579999998877664 67899999999753 34667788999999887 888887763
No 397
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=79.02 E-value=0.9 Score=45.36 Aligned_cols=37 Identities=27% Similarity=0.467 Sum_probs=19.1
Q ss_pred CceeEeecCCC--CCceecchhhhcccCCCeEeCCCCCC
Q 008008 446 PKIISLNLTSE--GLTGKISPSLSNLKSLENLDLSNNSL 482 (581)
Q Consensus 446 ~~l~~l~Ls~n--~l~G~ip~~l~~l~~L~~L~Ls~N~l 482 (581)
+.+..|.++.| +.++.++...-.+++|++|+|+.|++
T Consensus 65 p~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki 103 (260)
T KOG2739|consen 65 PKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKI 103 (260)
T ss_pred chhhhhcccCCcccccccceehhhhCCceeEEeecCCcc
Confidence 34555555555 33444444444445555555555555
No 398
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=78.09 E-value=0.3 Score=55.10 Aligned_cols=57 Identities=33% Similarity=0.449 Sum_probs=44.5
Q ss_pred eeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCC
Q 008008 448 IISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 448 l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~ 507 (581)
+..++.+.|.|. .+-.++.-++.|+.|||++|+|+. +- .+-.|+.|+.|||++|.|.
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~-v~-~Lr~l~~LkhLDlsyN~L~ 222 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTK-VD-NLRRLPKLKHLDLSYNCLR 222 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhh-hH-HHHhcccccccccccchhc
Confidence 444455566665 345678888999999999999973 32 7788999999999999986
No 399
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.08 E-value=1.3 Score=45.19 Aligned_cols=73 Identities=26% Similarity=0.425 Sum_probs=50.6
Q ss_pred cccCccCCCCCCCCCceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCC-ccccccCCCccccccccCccC
Q 008008 432 SWDGLNCSYNGYKPPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGS-IPEFLSQLPLLRVLNLDGNKL 506 (581)
Q Consensus 432 ~W~Gv~C~~~~~~~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~-iP~~l~~l~~L~~L~ls~N~l 506 (581)
.|+-|.|--. ..|+++.|+|+.|.|...|-..-.-+.+|+.|-|.+..|... .-..+..++.++.|.++.|++
T Consensus 85 dWseI~~ile--~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~ 158 (418)
T KOG2982|consen 85 DWSEIGAILE--QLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSL 158 (418)
T ss_pred cHHHHHHHHh--cCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchh
Confidence 4766665332 258999999999999754432223456788888887777543 345566788999999999944
No 400
>PRK12274 serine/threonine protein kinase; Provisional
Probab=75.11 E-value=4.1 Score=39.96 Aligned_cols=53 Identities=17% Similarity=0.043 Sum_probs=38.2
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCC--CC--hHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSS--QG--PKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~--~~--~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.++.++||+||...- ++.+++.+.++.... .. ..-|.+|+++|.+ |+++..++
T Consensus 9 ~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll 68 (218)
T PRK12274 9 PLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLL 68 (218)
T ss_pred eecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 689999999996554 567888888865433 11 1248899999999 46776654
No 401
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=73.99 E-value=1.9 Score=43.41 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=28.7
Q ss_pred ceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 545 SEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 545 ~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..|++|.+........++|.+|++++++ |||||+++
T Consensus 45 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~ 82 (274)
T cd05076 45 LRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVH 82 (274)
T ss_pred eeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeEE
Confidence 4799999975544445689999999998 99999875
No 402
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=73.91 E-value=2.9 Score=26.00 Aligned_cols=18 Identities=56% Similarity=0.850 Sum_probs=10.6
Q ss_pred cCCCeEeCCCCCCCCCccc
Q 008008 470 KSLENLDLSNNSLTGSIPE 488 (581)
Q Consensus 470 ~~L~~L~Ls~N~l~G~iP~ 488 (581)
++|+.|+|++|++. .+|.
T Consensus 2 ~~L~~L~L~~N~l~-~lp~ 19 (26)
T smart00369 2 PNLRELDLSNNQLS-SLPP 19 (26)
T ss_pred CCCCEEECCCCcCC-cCCH
Confidence 45666666666665 4443
No 403
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=73.91 E-value=2.9 Score=26.00 Aligned_cols=18 Identities=56% Similarity=0.850 Sum_probs=10.6
Q ss_pred cCCCeEeCCCCCCCCCccc
Q 008008 470 KSLENLDLSNNSLTGSIPE 488 (581)
Q Consensus 470 ~~L~~L~Ls~N~l~G~iP~ 488 (581)
++|+.|+|++|++. .+|.
T Consensus 2 ~~L~~L~L~~N~l~-~lp~ 19 (26)
T smart00370 2 PNLRELDLSNNQLS-SLPP 19 (26)
T ss_pred CCCCEEECCCCcCC-cCCH
Confidence 45666666666665 4443
No 404
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=73.72 E-value=2.5 Score=42.07 Aligned_cols=37 Identities=19% Similarity=0.230 Sum_probs=29.7
Q ss_pred CceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 544 GSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 544 g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
...|++|.+........+.|.+|+.++++ |||||+++
T Consensus 32 ~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~ 70 (262)
T cd05077 32 EIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLY 70 (262)
T ss_pred ceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 45789999876544556789999999998 99999875
No 405
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=73.67 E-value=2.9 Score=43.23 Aligned_cols=39 Identities=13% Similarity=0.214 Sum_probs=29.8
Q ss_pred cCCceEEEEeeccC----CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 542 ADGSEVAIKMLSAS----SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 542 ~~g~~VAVK~l~~~----~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+..||||.++.. .......+.+|+++|.+ |||||+++
T Consensus 22 ~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~ 66 (323)
T cd05584 22 DTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLI 66 (323)
T ss_pred CCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhcee
Confidence 46788999998642 12234568899999999 99999875
No 406
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=73.23 E-value=3 Score=41.06 Aligned_cols=38 Identities=24% Similarity=0.249 Sum_probs=30.5
Q ss_pred CCceEEEEeeccCCC-CChHHHHHHHHHHhc--CCCccccc
Q 008008 543 DGSEVAIKMLSASSS-QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 543 ~g~~VAVK~l~~~~~-~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
....||||.+..... ...++|..|++++++ |+|||+++
T Consensus 22 ~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 62 (257)
T cd05040 22 KVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLY 62 (257)
T ss_pred CceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCcccee
Confidence 345689999976554 456789999999999 99999864
No 407
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=73.18 E-value=0.89 Score=47.96 Aligned_cols=54 Identities=28% Similarity=0.384 Sum_probs=39.4
Q ss_pred eeccCCceeeeeeeecC------CceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLAD------GSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~------g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
++-+|-||.||+|.|.+ -+.|-||.++....| ....|..|-.+|-. ||||.+..
T Consensus 291 llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 291 LLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred hhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCcccee
Confidence 56789999999998743 346778887654322 34568888888777 99998754
No 408
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=73.03 E-value=2.3 Score=42.48 Aligned_cols=41 Identities=39% Similarity=0.690 Sum_probs=22.4
Q ss_pred hcccCCCeEeCCCC--CCCCCccccccCCCccccccccCccCC
Q 008008 467 SNLKSLENLDLSNN--SLTGSIPEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 467 ~~l~~L~~L~Ls~N--~l~G~iP~~l~~l~~L~~L~ls~N~l~ 507 (581)
-.|+.|++|++|.| ..++.++...-.+++|++|+|++|++.
T Consensus 62 P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~ 104 (260)
T KOG2739|consen 62 PKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIK 104 (260)
T ss_pred CCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccc
Confidence 34455566666666 444444444445566666666666554
No 409
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=71.45 E-value=2.7 Score=45.50 Aligned_cols=58 Identities=31% Similarity=0.414 Sum_probs=32.9
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCC
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~ 507 (581)
.+++.|+|+.|.++.. ..+..++.|+.|++++|.++ .+ ..+..+..|+.+++++|.+.
T Consensus 118 ~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l~~N~i~-~~-~~~~~l~~L~~l~l~~n~i~ 175 (414)
T KOG0531|consen 118 VNLQVLDLSFNKITKL--EGLSTLTLLKELNLSGNLIS-DI-SGLESLKSLKLLDLSYNRIV 175 (414)
T ss_pred hcchheeccccccccc--cchhhccchhhheeccCcch-hc-cCCccchhhhcccCCcchhh
Confidence 4566666666666532 13445555666666666664 22 22333666777777777665
No 410
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=71.44 E-value=1.3 Score=45.24 Aligned_cols=35 Identities=31% Similarity=0.454 Sum_probs=19.5
Q ss_pred ceeEeecCCCCCceec-chhhhcccCCCeEeCCCCC
Q 008008 447 KIISLNLTSEGLTGKI-SPSLSNLKSLENLDLSNNS 481 (581)
Q Consensus 447 ~l~~l~Ls~n~l~G~i-p~~l~~l~~L~~L~Ls~N~ 481 (581)
.+..|-|.+.+|.+.- ...+..++.++.|.+|.|+
T Consensus 122 nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~ 157 (418)
T KOG2982|consen 122 NLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNS 157 (418)
T ss_pred ceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccch
Confidence 3455556666665432 2345556666666666663
No 411
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=71.27 E-value=3.8 Score=45.67 Aligned_cols=29 Identities=24% Similarity=0.363 Sum_probs=26.8
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccC
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSAS 555 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~ 555 (581)
-++.++.|.||+|++.+|+.||||+.++.
T Consensus 132 PiAsASIaQVH~A~L~sG~~VAVKVqrPg 160 (517)
T COG0661 132 PIASASIAQVHRAVLKSGEEVAVKVQRPG 160 (517)
T ss_pred chhhhhHhhheeEEecCCCEEEEEecCCC
Confidence 57899999999999999999999999875
No 412
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=70.43 E-value=3.5 Score=42.39 Aligned_cols=39 Identities=13% Similarity=0.142 Sum_probs=29.6
Q ss_pred cCCceEEEEeeccCC--CCChHHHHHHHHHHhc--CCCccccc
Q 008008 542 ADGSEVAIKMLSASS--SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 542 ~~g~~VAVK~l~~~~--~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+|..+|+|+++... ......+..|+++|++ |||||+++
T Consensus 22 ~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~ 64 (318)
T cd05582 22 DAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLH 64 (318)
T ss_pred CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEE
Confidence 457889999986432 2234567889999999 99999875
No 413
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=70.05 E-value=5.6 Score=40.32 Aligned_cols=54 Identities=17% Similarity=0.321 Sum_probs=40.6
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCC-CCChHHHHHHHHHHhc-C--CCccccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-SQGPKQFRTEVELIDY-Y--KNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~-H--~NlV~l~ 580 (581)
.+|.|..|.|+|.+.. .|..+|||.+.... ....+.....+.++.+ | |.||+-+
T Consensus 99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~ 157 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCF 157 (391)
T ss_pred hhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeee
Confidence 6899999999999975 57899999986442 2334566777888777 5 7888643
No 414
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=69.85 E-value=5.6 Score=41.35 Aligned_cols=47 Identities=26% Similarity=0.449 Sum_probs=33.5
Q ss_pred EeeccCCceeeeeeeecCC--ceEEEEeeccCCCCChHHHHHHHHHHhc
Q 008008 526 RILGKGGFGTVYHGYLADG--SEVAIKMLSASSSQGPKQFRTEVELIDY 572 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~~g--~~VAVK~l~~~~~~~~~ef~~Ei~~l~~ 572 (581)
..||+|+||.||.+.-... ..+|+|.-..........+..|++++..
T Consensus 24 ~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~ 72 (322)
T KOG1164|consen 24 KKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKK 72 (322)
T ss_pred eeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHH
Confidence 3799999999999996443 4788887755433333367778877776
No 415
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=65.53 E-value=3.1 Score=42.95 Aligned_cols=56 Identities=29% Similarity=0.327 Sum_probs=41.6
Q ss_pred EeeccCCceeeeeeee-cCCceEEEEeeccCCCCC---hHHHHHHHHHHhc--CCCcccccC
Q 008008 526 RILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQG---PKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~---~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
.++|+|-||+|...+- ..++.+|+|.|+..-.-. ...=.+|-.+|.+ ||-|..|.|
T Consensus 174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKY 235 (516)
T KOG0690|consen 174 KVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKY 235 (516)
T ss_pred HHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhh
Confidence 3789999999986653 467889999997543222 3345688889988 998887754
No 416
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=65.51 E-value=4.6 Score=39.82 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=28.8
Q ss_pred CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 543 DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 543 ~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+...+|+|++.... .+..+.|..|+.++++ |||||+++
T Consensus 22 ~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 62 (262)
T cd05058 22 QKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLL 62 (262)
T ss_pred ceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEE
Confidence 45679999985432 2335688999999998 99999875
No 417
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=63.38 E-value=7.5 Score=38.22 Aligned_cols=36 Identities=25% Similarity=0.298 Sum_probs=29.2
Q ss_pred ceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 545 SEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 545 ~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|+|.+.....+ ..+++.+|++++++ |+|||+++
T Consensus 24 ~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 62 (257)
T cd05060 24 VEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLI 62 (257)
T ss_pred ceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence 68999999755443 45689999999999 99999874
No 418
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=62.47 E-value=10 Score=41.42 Aligned_cols=46 Identities=28% Similarity=0.389 Sum_probs=35.7
Q ss_pred EEeeccCCceeeeeeee-cCCceEEEEeeccCCCCCh-HHHHHHHHHHhc
Q 008008 525 LRILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGP-KQFRTEVELIDY 572 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~-~ef~~Ei~~l~~ 572 (581)
.+.+|=|.|++||.+.- .+.+-||+|+.+.. |.. +.-..||++|++
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA--qhYtEaAlDEIklL~~ 130 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA--QHYTEAALDEIKLLQQ 130 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehh--hHHHHHHHHHHHHHHH
Confidence 45899999999999884 45678999999643 332 345789999988
No 419
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=61.38 E-value=6.5 Score=38.49 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=27.6
Q ss_pred ceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 545 SEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 545 ~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..|++|.+...... ..+|.+|+++|++ |+||++++
T Consensus 31 ~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~ 67 (259)
T cd05037 31 VSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLY 67 (259)
T ss_pred eeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhhee
Confidence 46788887654333 6889999999999 99999875
No 420
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=60.79 E-value=5.7 Score=38.50 Aligned_cols=56 Identities=34% Similarity=0.453 Sum_probs=26.3
Q ss_pred eeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCcccccc-CCCccccccccCccC
Q 008008 448 IISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLS-QLPLLRVLNLDGNKL 506 (581)
Q Consensus 448 l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~-~l~~L~~L~ls~N~l 506 (581)
...++|+.|.+.- + ..|..+.+|..|.|++|.++ .|-+.+. -++.|..|.|.+|++
T Consensus 44 ~d~iDLtdNdl~~-l-~~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~LtnNsi 100 (233)
T KOG1644|consen 44 FDAIDLTDNDLRK-L-DNLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILTNNSI 100 (233)
T ss_pred cceecccccchhh-c-ccCCCccccceEEecCCcce-eeccchhhhccccceEEecCcch
Confidence 3445555555431 1 13334555555666666555 2222222 233455555555554
No 421
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=60.23 E-value=6.3 Score=39.93 Aligned_cols=54 Identities=24% Similarity=0.394 Sum_probs=38.0
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCC--CCC--hHH----HHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASS--SQG--PKQ----FRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~--~~~--~~e----f~~Ei~~l~~---H~NlV~l~ 580 (581)
++|.|..+.|-+... +.|...|+|.+.... .++ .++ =..|+++|.+ ||+|+.|.
T Consensus 24 ilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~ 89 (411)
T KOG0599|consen 24 ILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQ 89 (411)
T ss_pred HhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEee
Confidence 678888887766554 457789999885321 111 333 3689999999 99999874
No 422
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=59.79 E-value=10 Score=36.99 Aligned_cols=38 Identities=26% Similarity=0.346 Sum_probs=30.4
Q ss_pred CCceEEEEeeccCCCC-ChHHHHHHHHHHhc--CCCccccc
Q 008008 543 DGSEVAIKMLSASSSQ-GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 543 ~g~~VAVK~l~~~~~~-~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+..++||.++..... ..+++.+|++++.+ |+||++++
T Consensus 22 ~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~ 62 (262)
T cd00192 22 KTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLL 62 (262)
T ss_pred CCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheee
Confidence 4568999999765433 36789999999999 99999875
No 423
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=58.13 E-value=5.3 Score=39.53 Aligned_cols=37 Identities=27% Similarity=0.322 Sum_probs=28.6
Q ss_pred CceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 544 GSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 544 g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+..+|||.+.... .....+|.+|++++++ |||||+++
T Consensus 26 ~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~ 65 (269)
T cd05044 26 PIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLL 65 (269)
T ss_pred ceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEe
Confidence 4578999886443 2346789999999999 99999865
No 424
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=56.17 E-value=5.2 Score=42.97 Aligned_cols=60 Identities=33% Similarity=0.425 Sum_probs=28.4
Q ss_pred CceeEeecCCCCCceecchhh-hcccCCCeEeCCCCCCCCC-ccccccCCCccccccccCcc
Q 008008 446 PKIISLNLTSEGLTGKISPSL-SNLKSLENLDLSNNSLTGS-IPEFLSQLPLLRVLNLDGNK 505 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l-~~l~~L~~L~Ls~N~l~G~-iP~~l~~l~~L~~L~ls~N~ 505 (581)
++++.|+|+.|.|.-.+.... ..++.|+.|.|+.+.|+.. +-..+..+++|+.|+|..|.
T Consensus 172 p~Le~LNls~Nrl~~~~~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~ 233 (505)
T KOG3207|consen 172 PSLENLNLSSNRLSNFISSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANE 233 (505)
T ss_pred ccchhcccccccccCCccccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhccc
Confidence 444555555554432221111 1234444555555544411 22223456788888888773
No 425
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=55.86 E-value=5 Score=43.08 Aligned_cols=60 Identities=23% Similarity=0.445 Sum_probs=32.1
Q ss_pred CceeEeecCCCCCceecc--hhhhcccCCCeEeCCCCCCCCC-cccc-----ccCCCccccccccCccC
Q 008008 446 PKIISLNLTSEGLTGKIS--PSLSNLKSLENLDLSNNSLTGS-IPEF-----LSQLPLLRVLNLDGNKL 506 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip--~~l~~l~~L~~L~Ls~N~l~G~-iP~~-----l~~l~~L~~L~ls~N~l 506 (581)
++++.|+|++|++-- ++ .-.+.|+.|+.|+++.+.++.- +|+. ...+++|++|++..|++
T Consensus 246 ~~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 246 QTLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNI 313 (505)
T ss_pred hHHhhccccCCcccc-cccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCcc
Confidence 456666666666531 12 2345556666666666555421 2332 23455666666666665
No 426
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=54.48 E-value=3.3 Score=49.31 Aligned_cols=56 Identities=20% Similarity=0.341 Sum_probs=42.3
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
.+||+|+||.|...+.. .+..+|.|+|+.. ......-|.+|-.+|.. .+=||.|+|
T Consensus 81 KvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~Lhy 142 (1317)
T KOG0612|consen 81 KVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHY 142 (1317)
T ss_pred HHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHH
Confidence 38999999999988874 4668899999762 34456779999888886 555666554
No 427
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=54.10 E-value=2.7 Score=42.39 Aligned_cols=53 Identities=17% Similarity=0.356 Sum_probs=39.9
Q ss_pred eeccCCceeeeeeeecCCceEEEEeecc--CCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSA--SSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~--~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.+.+...|..|+|+|.. ..+++|.|+. ....-.++|.+|.-.|+- ||||.+.+
T Consensus 197 kl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvl 253 (448)
T KOG0195|consen 197 KLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVL 253 (448)
T ss_pred hhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhh
Confidence 45677889999999975 4566677753 333445789999988887 99998875
No 428
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=53.54 E-value=4.3 Score=40.12 Aligned_cols=37 Identities=24% Similarity=0.339 Sum_probs=29.1
Q ss_pred CceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 544 GSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 544 g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
...+|+|.+........++|.+|+.++++ |||||+++
T Consensus 27 ~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~ 65 (258)
T cd05078 27 KTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNY 65 (258)
T ss_pred cchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhhee
Confidence 45788888865544445789999999999 99999875
No 429
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=53.52 E-value=2.7 Score=25.64 Aligned_cols=14 Identities=64% Similarity=0.866 Sum_probs=6.0
Q ss_pred cCCCeEeCCCCCCC
Q 008008 470 KSLENLDLSNNSLT 483 (581)
Q Consensus 470 ~~L~~L~Ls~N~l~ 483 (581)
++|+.|+|++|+++
T Consensus 2 ~~L~~L~l~~n~i~ 15 (24)
T PF13516_consen 2 PNLETLDLSNNQIT 15 (24)
T ss_dssp TT-SEEE-TSSBEH
T ss_pred CCCCEEEccCCcCC
Confidence 34555555555443
No 430
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=52.86 E-value=3.6 Score=41.71 Aligned_cols=66 Identities=30% Similarity=0.472 Sum_probs=51.8
Q ss_pred CCceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCcc--ccccCCCccccccccCccCCCCCchH
Q 008008 445 PPKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIP--EFLSQLPLLRVLNLDGNKLSGSVPTS 513 (581)
Q Consensus 445 ~~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP--~~l~~l~~L~~L~ls~N~l~G~iP~~ 513 (581)
.+-+..|.||-|.++. + ..+..|++|+.|.|..|.+. .+- .-|-++++|+.|.|..|...|.-+..
T Consensus 40 Mp~lEVLsLSvNkIss-L-~pl~rCtrLkElYLRkN~I~-sldEL~YLknlpsLr~LWL~ENPCc~~ag~n 107 (388)
T KOG2123|consen 40 MPLLEVLSLSVNKISS-L-APLQRCTRLKELYLRKNCIE-SLDELEYLKNLPSLRTLWLDENPCCGEAGQN 107 (388)
T ss_pred cccceeEEeecccccc-c-hhHHHHHHHHHHHHHhcccc-cHHHHHHHhcCchhhhHhhccCCcccccchh
Confidence 4678899999999874 2 46889999999999999775 221 23567899999999999998876655
No 431
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=49.96 E-value=8.2 Score=41.73 Aligned_cols=58 Identities=38% Similarity=0.450 Sum_probs=33.3
Q ss_pred ceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCcccc-ccCCCccccccccCccCC
Q 008008 447 KIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEF-LSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 447 ~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~-l~~l~~L~~L~ls~N~l~ 507 (581)
.+..|++++|.++. + ..+..+..|+.++++.|.+...-+ . +..+..|+.+++.+|.+.
T Consensus 141 ~L~~L~l~~N~i~~-~-~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 141 LLKELNLSGNLISD-I-SGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIR 199 (414)
T ss_pred chhhheeccCcchh-c-cCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchh
Confidence 35666667766652 1 234446666677777776653222 1 455666666677766554
No 432
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=49.46 E-value=12 Score=37.99 Aligned_cols=41 Identities=37% Similarity=0.448 Sum_probs=20.9
Q ss_pred hhcccCCCeEeCCCCCCCCCccccc----cCCCccccccccCccC
Q 008008 466 LSNLKSLENLDLSNNSLTGSIPEFL----SQLPLLRVLNLDGNKL 506 (581)
Q Consensus 466 l~~l~~L~~L~Ls~N~l~G~iP~~l----~~l~~L~~L~ls~N~l 506 (581)
+..|++|+.++||.|.|.-..|..+ +.-+.|..|.|++|.+
T Consensus 88 Llkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGl 132 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGL 132 (388)
T ss_pred HhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCC
Confidence 3445555555555555554444332 2344555555555554
No 433
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=48.84 E-value=21 Score=32.50 Aligned_cols=49 Identities=12% Similarity=0.050 Sum_probs=35.0
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCcc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLS 577 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV 577 (581)
.++.|.++.||+.... +..+++|....... ....+..|++.+.. +.+++
T Consensus 5 ~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~ 55 (170)
T cd05151 5 PLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIG 55 (170)
T ss_pred ecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCC
Confidence 4688899999998876 67899998754421 23457788888887 44444
No 434
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=48.58 E-value=29 Score=33.24 Aligned_cols=43 Identities=30% Similarity=0.481 Sum_probs=31.9
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCCChHHHHHHHHHHhc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQGPKQFRTEVELIDY 572 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~ 572 (581)
.+++|.+|.||.|.+.++ .+|+|.-...+. .+.+..|+++|..
T Consensus 29 ~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~ds~--r~~l~kEakiLei 71 (201)
T COG2112 29 ELAKGTTSVVYLGEWRGG-EVALKVRRRDSP--RRNLEKEAKILEI 71 (201)
T ss_pred hhhcccccEEEEeeccCc-eEEEEEecCCcc--hhhHHHHHHHHHH
Confidence 689999999999999854 788887754432 3457777776654
No 435
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=48.27 E-value=1.1 Score=44.25 Aligned_cols=45 Identities=9% Similarity=0.065 Sum_probs=24.9
Q ss_pred cchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCC
Q 008008 462 ISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 462 ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~ 507 (581)
+|..++++..+..+++.+|+++ ..|.+.++++.++.+++-.|.|.
T Consensus 80 ~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e~k~~~~~ 124 (326)
T KOG0473|consen 80 LPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNEQKKTEFF 124 (326)
T ss_pred ChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhhhccCcch
Confidence 3444444444555555555554 55666666666666666655543
No 436
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=47.91 E-value=3.8 Score=44.82 Aligned_cols=55 Identities=22% Similarity=0.417 Sum_probs=42.4
Q ss_pred EeeccCCceeeeeeeec-CCceEEEEeeccCC-CCChHHHHHHHHHHhc--CCCccccc
Q 008008 526 RILGKGGFGTVYHGYLA-DGSEVAIKMLSASS-SQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 526 ~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~-~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
.++|.||||.|+.+... |+-..|||++.... ......-.+|+..+++ |++++++.
T Consensus 55 ~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e~s~~rvl~~~~s~a~feh~g~~~~~ 113 (516)
T KOG1033|consen 55 QCLGRGGFGVVFSAQNKADENKYAVKRITLKNREESRSRVLREVSSLAEFEHPGIKRYF 113 (516)
T ss_pred ccccccCccccCCccccccchhhHHHHhcccchhhhhhhhhccccchhhhcccchhhhe
Confidence 48999999999998865 44589999997543 3334567888888888 99998763
No 437
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=47.33 E-value=31 Score=34.30 Aligned_cols=49 Identities=16% Similarity=0.222 Sum_probs=35.6
Q ss_pred eec-cCCceeeeeeeecCCceEEEEeeccCC------C-------CChHHHHHHHHHHhc--CCCc
Q 008008 527 ILG-KGGFGTVYHGYLADGSEVAIKMLSASS------S-------QGPKQFRTEVELIDY--YKNL 576 (581)
Q Consensus 527 ~iG-~g~fg~Vykg~l~~g~~VAVK~l~~~~------~-------~~~~ef~~Ei~~l~~--H~Nl 576 (581)
++| .||.|+||+.... +..++||+.+... . .....+.+|++++.+ |++|
T Consensus 38 ~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi 102 (239)
T PRK01723 38 VVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGL 102 (239)
T ss_pred eeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCC
Confidence 677 8999999998886 5678888774211 0 123467889999998 7775
No 438
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=47.26 E-value=17 Score=36.99 Aligned_cols=51 Identities=16% Similarity=0.277 Sum_probs=37.5
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccCCCCChHHHHHHHHH--Hhc-CCCccc
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSASSSQGPKQFRTEVEL--IDY-YKNLSP 578 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~~~~~~ef~~Ei~~--l~~-H~NlV~ 578 (581)
.+|+|.||.+-.++-+ ..+.+++|-+. ......++|.+|-.- .-. |.|||.
T Consensus 31 ~lgeG~FgkIlL~eHr~s~t~ivlKavp-~p~tt~~dF~rEfhY~~~Ls~H~hIi~ 85 (378)
T KOG1345|consen 31 QLGEGRFGKILLAEHRQSKTRIVLKAVP-RPQTTQADFVREFHYSFFLSPHQHIID 85 (378)
T ss_pred HhcccceeeEEeeeccCCceEEEeeccC-cchhhHHHHHHHhccceeeccchhhhH
Confidence 6899999999887754 45688898874 223457899999854 222 999985
No 439
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=44.90 E-value=7.8 Score=43.62 Aligned_cols=57 Identities=19% Similarity=0.324 Sum_probs=43.7
Q ss_pred EEeeccCCceeeeeeeecC-CceEEEEeeccC---CCCChHHHHHHHHHHhc--CCCcccccC
Q 008008 525 LRILGKGGFGTVYHGYLAD-GSEVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTYF 581 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~~ 581 (581)
++-||.|.||+|..++-.| ...+|.|.|++. .++......+|-.+|+. .+=+|+|+|
T Consensus 634 ik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 634 IKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY 696 (1034)
T ss_pred EeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence 4479999999999877544 456789988643 23345678899999999 888899876
No 440
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=44.60 E-value=15 Score=38.37 Aligned_cols=26 Identities=38% Similarity=0.699 Sum_probs=23.1
Q ss_pred eeccCCceeeeeee-ecCCceEEEEee
Q 008008 527 ILGKGGFGTVYHGY-LADGSEVAIKML 552 (581)
Q Consensus 527 ~iG~g~fg~Vykg~-l~~g~~VAVK~l 552 (581)
.||+|.||..+.|+ |-++..||||.=
T Consensus 35 KIGeGsFG~lf~G~Nl~nne~VAIKfE 61 (449)
T KOG1165|consen 35 KIGEGSFGVLFLGKNLYNNEPVAIKFE 61 (449)
T ss_pred ccccCcceeeecccccccCceEEEEec
Confidence 79999999999998 667899999964
No 441
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=43.03 E-value=17 Score=23.13 Aligned_cols=17 Identities=65% Similarity=0.960 Sum_probs=10.2
Q ss_pred CCCeEeCCCCCCCCCccc
Q 008008 471 SLENLDLSNNSLTGSIPE 488 (581)
Q Consensus 471 ~L~~L~Ls~N~l~G~iP~ 488 (581)
.|+.|+.++|+|+ .+|+
T Consensus 3 ~L~~L~vs~N~Lt-~LPe 19 (26)
T smart00364 3 SLKELNVSNNQLT-SLPE 19 (26)
T ss_pred ccceeecCCCccc-cCcc
Confidence 4566677777665 4443
No 442
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=41.41 E-value=8 Score=39.73 Aligned_cols=49 Identities=29% Similarity=0.331 Sum_probs=35.0
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHH--Hhc-CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVEL--IDY-YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~--l~~-H~NlV~l~ 580 (581)
++|-|--|.|-.-.- ..+...|+|.|.++ ++-.+|+++ ++. |||||+.+
T Consensus 69 vLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~Ii 121 (400)
T KOG0604|consen 69 VLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSII 121 (400)
T ss_pred hhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEee
Confidence 689998898875443 45778999999543 345566655 555 99999864
No 443
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=41.39 E-value=25 Score=38.88 Aligned_cols=45 Identities=36% Similarity=0.392 Sum_probs=31.1
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY 572 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~ 572 (581)
..|+|-|++|.+|.- .-|..||||.+... +-..+.=..|+++|.+
T Consensus 439 ~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkK 484 (752)
T KOG0670|consen 439 YTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKK 484 (752)
T ss_pred ccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHH
Confidence 579999999999884 34679999999643 2223333456666654
No 444
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=40.76 E-value=28 Score=33.88 Aligned_cols=60 Identities=37% Similarity=0.593 Sum_probs=34.9
Q ss_pred CceeEeecCCCCCceecchhhh-cccCCCeEeCCCCCCC--CCccccccCCCccccccccCccCC
Q 008008 446 PKIISLNLTSEGLTGKISPSLS-NLKSLENLDLSNNSLT--GSIPEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~-~l~~L~~L~Ls~N~l~--G~iP~~l~~l~~L~~L~ls~N~l~ 507 (581)
+++..|.|.+|+++ .|-+.+. .++.|+.|.|.+|++. |.+ .-+..|+.|++|.+-+|..+
T Consensus 64 ~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~LtnNsi~~l~dl-~pLa~~p~L~~Ltll~Npv~ 126 (233)
T KOG1644|consen 64 PRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILTNNSIQELGDL-DPLASCPKLEYLTLLGNPVE 126 (233)
T ss_pred cccceEEecCCcce-eeccchhhhccccceEEecCcchhhhhhc-chhccCCccceeeecCCchh
Confidence 56677777777776 3434444 3455777777777663 122 12445666777666666553
No 445
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=38.79 E-value=29 Score=41.55 Aligned_cols=29 Identities=31% Similarity=0.605 Sum_probs=26.4
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccC
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSAS 555 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~ 555 (581)
.+|+|++|.||+|.-.+|..||+|.=++.
T Consensus 705 e~G~g~y~~vy~a~~~~~~~~alK~e~P~ 733 (974)
T KOG1166|consen 705 EIGEGSYGSVYVATHSNGKLVALKVEKPP 733 (974)
T ss_pred eeccccceEEEEeecCCCcEEEEEeecCC
Confidence 78999999999999888999999987654
No 446
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=38.71 E-value=25 Score=22.36 Aligned_cols=12 Identities=75% Similarity=0.947 Sum_probs=7.3
Q ss_pred CCCeEeCCCCCC
Q 008008 471 SLENLDLSNNSL 482 (581)
Q Consensus 471 ~L~~L~Ls~N~l 482 (581)
.|+.|||++|.+
T Consensus 3 ~L~~LdL~~N~i 14 (28)
T smart00368 3 SLRELDLSNNKL 14 (28)
T ss_pred ccCEEECCCCCC
Confidence 456666666655
No 447
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=37.71 E-value=27 Score=22.07 Aligned_cols=15 Identities=53% Similarity=0.798 Sum_probs=10.5
Q ss_pred ccCCCeEeCCCCCCC
Q 008008 469 LKSLENLDLSNNSLT 483 (581)
Q Consensus 469 l~~L~~L~Ls~N~l~ 483 (581)
++.|+.|+|++|.++
T Consensus 1 L~~L~~L~L~~NkI~ 15 (26)
T smart00365 1 LTNLEELDLSQNKIK 15 (26)
T ss_pred CCccCEEECCCCccc
Confidence 356777788877664
No 448
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=37.19 E-value=14 Score=39.59 Aligned_cols=31 Identities=39% Similarity=0.532 Sum_probs=24.5
Q ss_pred EEeeccCCceeeeeeeecC-CceEEEEeeccC
Q 008008 525 LRILGKGGFGTVYHGYLAD-GSEVAIKMLSAS 555 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l~~-g~~VAVK~l~~~ 555 (581)
+.++|+|+||.|..+.-.+ .+..|||.|+..
T Consensus 354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKD 385 (683)
T KOG0696|consen 354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKD 385 (683)
T ss_pred EEEeccCccceeeeecccCcchhhhhhhhccc
Confidence 3589999999999888653 246899999754
No 449
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=37.03 E-value=32 Score=38.49 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=27.1
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCC
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASS 556 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~ 556 (581)
-|+..+.|.||++++++|+.||||+-++.-
T Consensus 168 piaaASlaQVhrA~L~~G~~VaVKVQ~P~l 197 (538)
T KOG1235|consen 168 PIAAASLAQVHRARLKNGEDVAVKVQHPGL 197 (538)
T ss_pred hhhhcchhheEEEEecCCCEEEEEecCcCh
Confidence 579999999999999999999999997653
No 450
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=33.96 E-value=3.3 Score=42.39 Aligned_cols=62 Identities=24% Similarity=0.283 Sum_probs=41.7
Q ss_pred CceeEeecCCCCCce-ecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccC-ccCC
Q 008008 446 PKIISLNLTSEGLTG-KISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDG-NKLS 507 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G-~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~-N~l~ 507 (581)
.|++.+|||+..++- .+-.-+..|..|+.|.|.+++|...|-..+.+-..|+.|+|+. |.|+
T Consensus 185 sRlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t 248 (419)
T KOG2120|consen 185 SRLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFT 248 (419)
T ss_pred hhhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccc
Confidence 357777777766642 2233456677777777888888777777777777788777774 3444
No 451
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms]
Probab=33.23 E-value=35 Score=34.75 Aligned_cols=92 Identities=18% Similarity=0.200 Sum_probs=58.3
Q ss_pred cEEEecCCCCCCcccCCCCceeecCCccc-----ccCCCccccccccccccccccceeeeeeCCCCceeEEecCCCCCcc
Q 008008 64 DISIDCGVPAGFMYLDEKTQLSYKSDEEF-----IRTGVNKNISSKFMSANLQNTYATVRSFPEGNRNCYSLRPPEGKAK 138 (581)
Q Consensus 64 f~~IdCG~~~~~~~~D~~~~~~w~~D~~~-----~~~g~~~~i~~~~~~~~~~~~y~t~R~f~~~~~~~Y~~~v~~~~~~ 138 (581)
-+-||||+.+- +| ..|+.|..|.-- .+-|.--.+--. ....-...|+|+|+=.+. +-|..|++..+
T Consensus 61 I~aVncGgdaa---vd-~ygI~f~aD~~~~VGrasd~G~~l~i~~r-aeeed~ily~ter~neet--Fgyd~pik~dg-- 131 (355)
T KOG3593|consen 61 IPAVNCGGDAA---VD-NYGIRFAADPLEGVGRASDYGMVLGIGCR-AEEEDIILYQTERYNEET--FGYDVPIKEDG-- 131 (355)
T ss_pred hheeccCChhh---hc-ccceEeeccccccccccCCccceeecccc-CChhhhhhhhhcccchhh--hcccccccCCC--
Confidence 35689998643 44 368999988521 011111111100 011224689999996543 57999999888
Q ss_pred cEEEEEEeecCCCCCCCCCceEEEEEc
Q 008008 139 TYLTRASFMYGDYDDEDKLPEFDLYIG 165 (581)
Q Consensus 139 ~ylVRl~F~~~~yd~~~~~~~F~v~i~ 165 (581)
.|-+=+.|+.--++.... -+||+.+|
T Consensus 132 dyalvlkfaevyF~~~q~-kvfdvrln 157 (355)
T KOG3593|consen 132 DYALVLKFAEVYFKTCQH-KVFDVRLN 157 (355)
T ss_pred ceehhhhHHHHHHHhhhh-hheeeeec
Confidence 999999999433554343 58999998
No 452
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=32.75 E-value=4.9 Score=39.83 Aligned_cols=65 Identities=28% Similarity=0.311 Sum_probs=48.1
Q ss_pred CceeEeecCCCCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccCCCCCchH
Q 008008 446 PKIISLNLTSEGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKLSGSVPTS 513 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l~G~iP~~ 513 (581)
.+++.|||+.|++. .+-..+..++.|..|||+.|++. -+|...+++..+..+++.+|+++ ..|.+
T Consensus 42 kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s 106 (326)
T KOG0473|consen 42 KRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKS 106 (326)
T ss_pred ceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCcc
Confidence 47888888888875 23456777788888888888775 67888888888888888877775 44444
No 453
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=32.24 E-value=18 Score=37.89 Aligned_cols=38 Identities=32% Similarity=0.308 Sum_probs=19.3
Q ss_pred ccCCCeEeCCCCCCCCCccc----cccCCCccccccccCccC
Q 008008 469 LKSLENLDLSNNSLTGSIPE----FLSQLPLLRVLNLDGNKL 506 (581)
Q Consensus 469 l~~L~~L~Ls~N~l~G~iP~----~l~~l~~L~~L~ls~N~l 506 (581)
++.|++||||.|.|.-.-+. -+.++.+|+.|.|.||.+
T Consensus 91 ~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Gl 132 (382)
T KOG1909|consen 91 CPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGL 132 (382)
T ss_pred CCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCC
Confidence 34555666666655433222 233455666666666555
No 454
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=31.15 E-value=47 Score=33.93 Aligned_cols=61 Identities=25% Similarity=0.420 Sum_probs=44.2
Q ss_pred CceeEeecCCCCCceecchhhh----cccCCCeEeCCCCCCCCCcc-----cc---------ccCCCccccccccCccCC
Q 008008 446 PKIISLNLTSEGLTGKISPSLS----NLKSLENLDLSNNSLTGSIP-----EF---------LSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G~ip~~l~----~l~~L~~L~Ls~N~l~G~iP-----~~---------l~~l~~L~~L~ls~N~l~ 507 (581)
+++..++||.|.+.-..|+.+. .-+.|++|.|+||.+. ++- .. ...-+.|++.....|.|.
T Consensus 92 p~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlG-p~aG~rigkal~~la~nKKaa~kp~Le~vicgrNRle 170 (388)
T COG5238 92 PRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLG-PIAGGRIGKALFHLAYNKKAADKPKLEVVICGRNRLE 170 (388)
T ss_pred CcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCC-ccchhHHHHHHHHHHHHhhhccCCCceEEEeccchhc
Confidence 6899999999999877777654 4477999999999873 322 11 223457888888888763
No 455
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=29.29 E-value=31 Score=36.19 Aligned_cols=68 Identities=29% Similarity=0.423 Sum_probs=49.4
Q ss_pred CceeEeecCCCCCce----ecchhhhcccCCCeEeCCCCCCCCC----cccc-------ccCCCccccccccCccCCCCC
Q 008008 446 PKIISLNLTSEGLTG----KISPSLSNLKSLENLDLSNNSLTGS----IPEF-------LSQLPLLRVLNLDGNKLSGSV 510 (581)
Q Consensus 446 ~~l~~l~Ls~n~l~G----~ip~~l~~l~~L~~L~Ls~N~l~G~----iP~~-------l~~l~~L~~L~ls~N~l~G~i 510 (581)
..++.|+|++|.+.- .|...+.+.+.|+..++|+ -++|. +|+. |-.++.|+.||||.|-|.-.-
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd-~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSD-MFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHh-hhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 358899999999852 2455677788899998875 35554 4543 445779999999999997665
Q ss_pred chHH
Q 008008 511 PTSL 514 (581)
Q Consensus 511 P~~l 514 (581)
+..+
T Consensus 109 ~~~l 112 (382)
T KOG1909|consen 109 IRGL 112 (382)
T ss_pred hHHH
Confidence 5543
No 456
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=28.79 E-value=36 Score=39.57 Aligned_cols=15 Identities=40% Similarity=0.578 Sum_probs=8.0
Q ss_pred ccCCCccccccccCc
Q 008008 490 LSQLPLLRVLNLDGN 504 (581)
Q Consensus 490 l~~l~~L~~L~ls~N 504 (581)
+.+|+.|+.||+|..
T Consensus 216 LF~L~~L~vLDIS~~ 230 (699)
T KOG3665|consen 216 LFNLKKLRVLDISRD 230 (699)
T ss_pred HhcccCCCeeecccc
Confidence 444555555555544
No 457
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=27.94 E-value=25 Score=39.58 Aligned_cols=50 Identities=22% Similarity=0.263 Sum_probs=35.8
Q ss_pred eeccCCceeeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc---CCCccccc
Q 008008 527 ILGKGGFGTVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
.+|+|.|+.|-+... ..++.-+||.+... ..+-.+|+.++.+ |+|||++.
T Consensus 329 ~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~ 382 (612)
T KOG0603|consen 329 ELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSH 382 (612)
T ss_pred ccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeec
Confidence 589999998876664 56778899999654 2234456655544 99999875
No 458
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=27.76 E-value=1e+02 Score=30.10 Aligned_cols=53 Identities=23% Similarity=0.338 Sum_probs=32.9
Q ss_pred eeccCCceeeeeeeecCCceEEEEeeccCCCC--ChHHHHHHHHHHhc--CC-Cccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSASSSQ--GPKQFRTEVELIDY--YK-NLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~~~~~--~~~ef~~Ei~~l~~--H~-NlV~l~ 580 (581)
.+|.|+|+.||++.... ..+.-......... ....|.+|++++++ |+ |++.++
T Consensus 7 ~l~~g~~~~v~~~~~~~-~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~ 64 (384)
T COG0515 7 KLGEGSFGEVYLARDRK-LVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLY 64 (384)
T ss_pred eecCCCCeEEEEEEecc-EEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEE
Confidence 67999999999999770 00000000011112 36789999999998 66 687753
No 459
>PRK15386 type III secretion protein GogB; Provisional
Probab=27.15 E-value=64 Score=35.02 Aligned_cols=64 Identities=23% Similarity=0.449 Sum_probs=39.6
Q ss_pred CCceeEeecCC-CCCceecchhhhcccCCCeEeCCCCCCCCCccccccCCCccccccccCccC--CCCCchHHHhh
Q 008008 445 PPKIISLNLTS-EGLTGKISPSLSNLKSLENLDLSNNSLTGSIPEFLSQLPLLRVLNLDGNKL--SGSVPTSLVAR 517 (581)
Q Consensus 445 ~~~l~~l~Ls~-n~l~G~ip~~l~~l~~L~~L~Ls~N~l~G~iP~~l~~l~~L~~L~ls~N~l--~G~iP~~l~~~ 517 (581)
+..|+.|.+++ +.|+ .+|..+ ..+|+.|++++|..-..+|.. |+.|++..|.+ -+.+|.+|...
T Consensus 71 P~sLtsL~Lsnc~nLt-sLP~~L--P~nLe~L~Ls~Cs~L~sLP~s------Le~L~L~~n~~~~L~~LPssLk~L 137 (426)
T PRK15386 71 PNELTEITIENCNNLT-TLPGSI--PEGLEKLTVCHCPEISGLPES------VRSLEIKGSATDSIKNVPNGLTSL 137 (426)
T ss_pred CCCCcEEEccCCCCcc-cCCchh--hhhhhheEccCcccccccccc------cceEEeCCCCCcccccCcchHhhe
Confidence 45688888876 4442 445433 257889999988333356654 55555666543 25788887543
No 460
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=26.86 E-value=11 Score=38.89 Aligned_cols=60 Identities=27% Similarity=0.244 Sum_probs=28.1
Q ss_pred eeEeecCCCCCceecchhhhcccCCCeEeCCCC-CCCCC-ccccccCCCccccccccCccCC
Q 008008 448 IISLNLTSEGLTGKISPSLSNLKSLENLDLSNN-SLTGS-IPEFLSQLPLLRVLNLDGNKLS 507 (581)
Q Consensus 448 l~~l~Ls~n~l~G~ip~~l~~l~~L~~L~Ls~N-~l~G~-iP~~l~~l~~L~~L~ls~N~l~ 507 (581)
+..|.|.++.|...|-..+..-.+|+.|||+.. .|+.. +---+.+|+.|..|+|+...+.
T Consensus 212 Lk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~LNlsWc~l~ 273 (419)
T KOG2120|consen 212 LKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDELNLSWCFLF 273 (419)
T ss_pred hhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhcCchHhhcc
Confidence 444555555555555555555555555555532 22210 1112334555555555555443
No 461
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=26.16 E-value=60 Score=39.39 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=38.1
Q ss_pred eeccCCceeeeeeeecCCceEEEEeecc-CCCCChHHHHHH---HHHHhc-CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGSEVAIKMLSA-SSSQGPKQFRTE---VELIDY-YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~~VAVK~l~~-~~~~~~~ef~~E---i~~l~~-H~NlV~l~ 580 (581)
.+|.+.|=+|.+++-++|. |+||+.-. ...-..++|.++ ++.... |||.+++.
T Consensus 30 ~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfq 87 (1431)
T KOG1240|consen 30 NLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQ 87 (1431)
T ss_pred ccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchH
Confidence 6899999999999988887 88998743 334455666544 443333 99998763
No 462
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=25.48 E-value=75 Score=35.44 Aligned_cols=46 Identities=24% Similarity=0.263 Sum_probs=34.3
Q ss_pred eeeeeee-cCCceEEEEeeccCCCCChHHHHHHHHHHhc--CCCccccc
Q 008008 535 TVYHGYL-ADGSEVAIKMLSASSSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 535 ~Vykg~l-~~g~~VAVK~l~~~~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
+.||+.- -||..++.||++....|....-..-++..++ |.|+|+|.
T Consensus 291 Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~fr 339 (655)
T KOG3741|consen 291 TTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFR 339 (655)
T ss_pred eeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehh
Confidence 5677774 4889999999976655655444555778888 99999873
No 463
>PRK15386 type III secretion protein GogB; Provisional
Probab=24.23 E-value=78 Score=34.35 Aligned_cols=45 Identities=16% Similarity=0.363 Sum_probs=26.9
Q ss_pred CCceeEeecCCC-CCceecchhhhcccCCCeEeCCCCCCC--CCccccccCCCcccccccc
Q 008008 445 PPKIISLNLTSE-GLTGKISPSLSNLKSLENLDLSNNSLT--GSIPEFLSQLPLLRVLNLD 502 (581)
Q Consensus 445 ~~~l~~l~Ls~n-~l~G~ip~~l~~l~~L~~L~Ls~N~l~--G~iP~~l~~l~~L~~L~ls 502 (581)
+..+..|+++++ .+. .+|. .|+.|+++.|.+. +.+|.. |+.|.+.
T Consensus 93 P~nLe~L~Ls~Cs~L~-sLP~------sLe~L~L~~n~~~~L~~LPss------Lk~L~I~ 140 (426)
T PRK15386 93 PEGLEKLTVCHCPEIS-GLPE------SVRSLEIKGSATDSIKNVPNG------LTSLSIN 140 (426)
T ss_pred hhhhhheEccCccccc-cccc------ccceEEeCCCCCcccccCcch------Hhheecc
Confidence 456888888877 443 4554 4667777766542 345554 4555554
No 464
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=23.58 E-value=1.1e+02 Score=31.56 Aligned_cols=45 Identities=33% Similarity=0.497 Sum_probs=33.5
Q ss_pred eeccCCceeeeeeeec-CCceEEEEeeccC---CCCChHHHHHHHHHHh
Q 008008 527 ILGKGGFGTVYHGYLA-DGSEVAIKMLSAS---SSQGPKQFRTEVELID 571 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~---~~~~~~ef~~Ei~~l~ 571 (581)
.||.|+++.||.++-. .|+..|||..... .....+++.+|.-...
T Consensus 19 ~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~ 67 (288)
T PF14531_consen 19 IIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAIT 67 (288)
T ss_dssp EEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGG
T ss_pred ccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhh
Confidence 7999999999999975 4889999977422 2344677887765443
No 465
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=22.50 E-value=51 Score=36.70 Aligned_cols=63 Identities=32% Similarity=0.365 Sum_probs=40.1
Q ss_pred CCceeEeecCCCCCce--ecchhhhcccCCCeEeCCCC--CCCCCccccccC--CCccccccccCccCCCC
Q 008008 445 PPKIISLNLTSEGLTG--KISPSLSNLKSLENLDLSNN--SLTGSIPEFLSQ--LPLLRVLNLDGNKLSGS 509 (581)
Q Consensus 445 ~~~l~~l~Ls~n~l~G--~ip~~l~~l~~L~~L~Ls~N--~l~G~iP~~l~~--l~~L~~L~ls~N~l~G~ 509 (581)
.+.|.+++|++|+|.- .+..--...+.|+.|+|++| .+. .-.++.+ ...|++|-|.+|.+.-.
T Consensus 217 ~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N~~~~~--~~~el~K~k~l~Leel~l~GNPlc~t 285 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHNHSKIS--SESELDKLKGLPLEELVLEGNPLCTT 285 (585)
T ss_pred CcceeeeecccchhhchhhhhHHHHhcchhheeecccchhhhc--chhhhhhhcCCCHHHeeecCCccccc
Confidence 3678999999999852 11111223467899999999 332 1223333 33678888899988644
No 466
>PF06716 DUF1201: Protein of unknown function (DUF1201); InterPro: IPR009591 This entry consists of several Beet yellows virus (BYV) putative membrane-binding proteins of around 54 residues in length. The function of this currently unknown.
Probab=22.33 E-value=53 Score=23.71 Aligned_cols=23 Identities=30% Similarity=0.473 Sum_probs=16.9
Q ss_pred cchhhhhhHHHHHHHHHhhheee
Q 008008 6 KSSRAYDLMMRFIFISLFAICVC 28 (581)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~ 28 (581)
|-+||+-++-+=+.+.||+.|+.
T Consensus 3 CvLRs~L~~~F~~lIC~Fl~~~~ 25 (54)
T PF06716_consen 3 CVLRSYLLLAFGFLICLFLFCLV 25 (54)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899877766667777777764
No 467
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=22.07 E-value=57 Score=34.06 Aligned_cols=56 Identities=20% Similarity=0.257 Sum_probs=39.1
Q ss_pred EEeeccCCceeeeeeeec-CCceEEEEeeccCC---CCChHHHHHHHHHHhc---CCCccccc
Q 008008 525 LRILGKGGFGTVYHGYLA-DGSEVAIKMLSASS---SQGPKQFRTEVELIDY---YKNLSPTY 580 (581)
Q Consensus 525 l~~iG~g~fg~Vykg~l~-~g~~VAVK~l~~~~---~~~~~ef~~Ei~~l~~---H~NlV~l~ 580 (581)
+++||+|++.+|..+++. ..+.+|+|.+++.- .....=.++|-.+..+ ||-||-|+
T Consensus 255 l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglh 317 (593)
T KOG0695|consen 255 LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLH 317 (593)
T ss_pred eeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehh
Confidence 458999999999999875 45678999886432 1223334566666655 99888764
No 468
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=22.03 E-value=45 Score=38.80 Aligned_cols=50 Identities=34% Similarity=0.432 Sum_probs=25.5
Q ss_pred hhhcccCCCeEeCCCCCCCCC--ccc----cccCCCccccccccCccCCCCCchHH
Q 008008 465 SLSNLKSLENLDLSNNSLTGS--IPE----FLSQLPLLRVLNLDGNKLSGSVPTSL 514 (581)
Q Consensus 465 ~l~~l~~L~~L~Ls~N~l~G~--iP~----~l~~l~~L~~L~ls~N~l~G~iP~~l 514 (581)
.+.+|+.|+.||+|....... +.. .-..|+.|+.||.|++.++..+-..+
T Consensus 215 ~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~l 270 (699)
T KOG3665|consen 215 DLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEEL 270 (699)
T ss_pred HHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHH
Confidence 355566666666665443311 111 11125667777777666655444333
No 469
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=21.97 E-value=75 Score=31.26 Aligned_cols=22 Identities=18% Similarity=0.107 Sum_probs=18.6
Q ss_pred ChHHHHHHHHHHhc--CCCccccc
Q 008008 559 GPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 559 ~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
...+|.+|++++++ |||||+++
T Consensus 38 ~~~~~~~E~~~l~~l~h~~iv~~~ 61 (269)
T cd05087 38 EQMKFLEEAQPYRSLQHSNLLQCL 61 (269)
T ss_pred HHHHHHHHHHHHHhCCCCCEeeEE
Confidence 34579999999999 99999875
No 470
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=21.41 E-value=88 Score=30.72 Aligned_cols=21 Identities=19% Similarity=0.059 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHhc--CCCccccc
Q 008008 560 PKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 560 ~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
..+|.+|++++++ |+||++++
T Consensus 39 ~~~~~~e~~~~~~l~h~nii~~~ 61 (269)
T cd05042 39 QLLFLQEVQPYRELNHPNVLQCL 61 (269)
T ss_pred HHHHHHHHHHHHhCCCCCcceEE
Confidence 4678999999988 99999875
No 471
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=20.53 E-value=20 Score=39.46 Aligned_cols=54 Identities=22% Similarity=0.324 Sum_probs=37.2
Q ss_pred eeccCCceeeeeeeecCCc-eEEEEeeccC---CCCChHHHHHHHHHHhc--CCCccccc
Q 008008 527 ILGKGGFGTVYHGYLADGS-EVAIKMLSAS---SSQGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 527 ~iG~g~fg~Vykg~l~~g~-~VAVK~l~~~---~~~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
-+|.||||.|-..+..... ..|.|.++.. .....++...|-++|.+ .+-||+|+
T Consensus 427 TLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLY 486 (732)
T KOG0614|consen 427 TLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLY 486 (732)
T ss_pred hcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHH
Confidence 6899999999887775433 3677766532 22234567778888777 77888775
No 472
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=20.38 E-value=91 Score=30.73 Aligned_cols=23 Identities=9% Similarity=0.088 Sum_probs=19.4
Q ss_pred CChHHHHHHHHHHhc--CCCccccc
Q 008008 558 QGPKQFRTEVELIDY--YKNLSPTY 580 (581)
Q Consensus 558 ~~~~ef~~Ei~~l~~--H~NlV~l~ 580 (581)
...++|.+|++++++ |||||+++
T Consensus 37 ~~~~~~~~e~~~~~~l~h~~iv~~~ 61 (268)
T cd05086 37 KEQNEFLQQGDPYRILQHPNILQCL 61 (268)
T ss_pred HHHHHHHHHHHHHhccCCcchhheE
Confidence 345789999999998 99999875
Done!