BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008009
(581 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 395 FEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ-- 452
F+ D+D DG+V++E+L A+R L + + + L +K F F ++ +
Sbjct: 11 FQIFDKDNDGKVSIEELGSALRS--LGKNPTNAELNTIKGQLNAKEFDLATFKTVYRKPI 68
Query: 453 KEPT-----ILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEES 507
K PT +L A+ +L +GT+Q++E+ L N G +M+ ++ + +
Sbjct: 69 KTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGA 128
Query: 508 ISYGHFRNFMV 518
I+Y F + +V
Sbjct: 129 INYESFVDMLV 139
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 398 LDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFG---WKQFLSLMEQK- 453
D+DGDG + +E E+A R L + E ++ S + + G + +FLSLM +K
Sbjct: 19 FDKDGDGCITVE--ELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKV 76
Query: 454 -----EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESI 508
E + A+ ++G + SE+ + N G +E M++ + D + +
Sbjct: 77 KDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQV 136
Query: 509 SYGHFRNFMVLL 520
+Y F M+ +
Sbjct: 137 NYEEFVKMMMTV 148
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
SLM +K E ++ A+ +G + +E+ + N G ++ M+R +
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREAD 129
Query: 502 ADTEESISYGHFRNFMV 518
D + I+Y F MV
Sbjct: 130 IDGDGHINYEEFVRMMV 146
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
SLM +K E ++ A+ +G + +E+ + N G ++ M+R +
Sbjct: 70 SLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREAD 129
Query: 502 ADTEESISYGHFRNFMV 518
D + I+Y F MV
Sbjct: 130 IDGDGHINYEEFVRMMV 146
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 37.4 bits (85), Expect = 0.023, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R N
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAN 129
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 130 IDGDGQVNYEEFVQMM 145
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 396
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 397 IDGDGQVNYEEFVQMMT 413
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 277 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 336
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 337 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 396
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 397 IDGDGQVNYEEFVQMMT 413
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 274 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 333
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 334 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 393
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 394 IDGDGQVNYEEFVQMMT 410
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 431 IDGDGQVNYEEFVQMMT 447
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + +FL
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 370 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 429
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 430 IDGDGQVNYEEFVQMMT 446
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 312 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 371
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 372 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 431
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 432 IDGDGQVNYEEFVQMMT 448
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + +FL
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 370 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 429
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 430 IDGDGQVNYEEFVQMMT 446
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + +FL
Sbjct: 310 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 369
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 370 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 429
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 430 IDGDGQVNYEEFVQMMT 446
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 431 IDGDGQVNYEEFVQMMT 447
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 371 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 431 IDGDGQVNYEEFVQMMT 447
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + +FL
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 370
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 371 TMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 431 IDGDGQVNYEEFVQMMT 447
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 36.2 bits (82), Expect = 0.058, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 6/135 (4%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 448 SLMEQK-----EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNA 502
++M +K I A+ +G + +E+ + N G +E M+R N
Sbjct: 66 TMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANI 125
Query: 503 DTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 126 DGDGQVNYEEFVQMM 140
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 448 SLMEQK----EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNAD 503
++M +K E I A+ +G + +E+ + N G +E M+R + D
Sbjct: 70 TMMARKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADID 129
Query: 504 TEESISYGHFRNFMV 518
+ ++Y F M
Sbjct: 130 GDGQVNYEEFVTMMT 144
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 35.8 bits (81), Expect = 0.062, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 131 IDGDGQVNYEEFVQMM 146
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + + L MR + P + M + + + QFL
Sbjct: 311 AEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFL 370
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +++ + N G +E M+R
Sbjct: 371 TMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAG 430
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 431 IDGDGQVNYEQFVQMMT 447
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 35.8 bits (81), Expect = 0.072, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 67 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 126
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 127 IDGDGQVNYEEFVQMM 142
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 35.8 bits (81), Expect = 0.074, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 130 IDGDGQVNYEEFVQMM 145
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 35.8 bits (81), Expect = 0.074, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 128 IDGDGQVNYEEFVQMM 143
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 35.8 bits (81), Expect = 0.075, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREAD 130
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 131 IDGDGQVNYEEFVQMM 146
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 35.8 bits (81), Expect = 0.076, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 131 IDGDGQVNYEEFVQMM 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 35.8 bits (81), Expect = 0.076, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 16 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 75
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 76 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 135
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 136 IDGDGQVNYEEFVQMM 151
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 35.8 bits (81), Expect = 0.076, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 130 IDGDGQVNYEEFVQMM 145
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 35.8 bits (81), Expect = 0.077, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 128 IDGDGQVNYEEFVQMM 143
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 35.4 bits (80), Expect = 0.077, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 67
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 68 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 127
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 128 IDGDGQVNYEEFVQMM 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 35.4 bits (80), Expect = 0.077, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 6 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 65
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 66 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 125
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 126 IDGDGQVNYEEFVQMM 141
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 35.4 bits (80), Expect = 0.077, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 9 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 68
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 69 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 128
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 129 IDGDGQVNYEEFVQMM 144
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 35.4 bits (80), Expect = 0.079, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 131 IDGDGQVNYEEFVQMM 146
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 35.4 bits (80), Expect = 0.079, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 14 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 73
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 74 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 133
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 134 IDGDGQVNYEEFVQMM 149
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 35.4 bits (80), Expect = 0.079, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 131 IDGDGQVNYEEFVQMM 146
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 35.4 bits (80), Expect = 0.081, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 12 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 71
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 72 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 131
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 132 IDGDGQVNYEEFVQMM 147
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 35.4 bits (80), Expect = 0.088, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREAD 130
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 131 IDGDGQVNYEEFVQMM 146
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 35.4 bits (80), Expect = 0.088, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREAD 129
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 130 IDGDGQVNYEEFVQMM 145
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 35.4 bits (80), Expect = 0.096, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 131 IDGDGQVNYEEFVTMM 146
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 35.4 bits (80), Expect = 0.098, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + +FL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 130 IDGDGQVNYEEFVQMM 145
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 35.4 bits (80), Expect = 0.098, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 131 IDGDGQVNYEEFVTMM 146
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 35.4 bits (80), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
+LM +K E + A+ +G + +E+ + N G +E M+R +
Sbjct: 70 NLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M+
Sbjct: 130 VDGDGQVNYEEFVQVMM 146
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 130 IDGDGQVNYEEFVTMM 145
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 66
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
+LM +K E + A+ +G + +E+ + N G +E M+R +
Sbjct: 67 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 126
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M+
Sbjct: 127 VDGDGQVNYEEFVQVMM 143
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 35.0 bits (79), Expect = 0.10, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 7/136 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 70 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 502 ADTEESISYGHFRNFM 517
D + ++Y F M
Sbjct: 130 IDGDGQVNYEEFVTMM 145
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
+E + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
+LM +K E + A+ ++G + +E+ + N G +E M+R +
Sbjct: 71 NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 502 ADTEESISYGHFRNFMV 518
D + I+Y F M+
Sbjct: 131 VDGDGQINYDEFVKVMM 147
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
+LM +K E + A+ +G + +E+ + N G +E M+R +
Sbjct: 70 NLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M+
Sbjct: 130 VDGDGQVNYEEFVQVMM 146
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
+E + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 11 SEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
+LM +K E + A+ ++G + +E+ + N G +E M+R +
Sbjct: 71 NLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 130
Query: 502 ADTEESISYGHFRNFMV 518
D + I+Y F M+
Sbjct: 131 VDGDGQINYEEFVKVMM 147
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 311 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 370
Query: 448 SLMEQ------KEPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M + E I A+ +G + +E+ + N G +E M+R +
Sbjct: 371 TMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 430
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 431 IDGDGQVNYEEFVQMMT 447
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-KLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + + +FL
Sbjct: 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
++M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 71 TMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESD 130
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 131 IDGDGQVNYEEFVTMMT 147
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 7/137 (5%)
Query: 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447
AE + F D+DGDG + ++L MR + P + M + + +FL
Sbjct: 302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 361
Query: 448 SLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLN 501
+M +K E I A+ +G + +E+ + N G +E M+R +
Sbjct: 362 IMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 421
Query: 502 ADTEESISYGHFRNFMV 518
D + ++Y F M
Sbjct: 422 IDGDGQVNYEEFVQMMT 438
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 32.3 bits (72), Expect = 0.67, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 396 EELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRT 432
+E+D+D DGQ++ + MRKRK R MR+T
Sbjct: 123 KEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKT 159
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK 417
FEELD++GDG+V+ E+ ++ ++K
Sbjct: 52 ELFEELDKNGDGEVSFEEFQVLVKK 76
>pdb|1TA9|A Chain A, Crystal Structure Of Glycerol Dehydrogenase From
Schizosaccharomyces Pombe
pdb|1TA9|B Chain B, Crystal Structure Of Glycerol Dehydrogenase From
Schizosaccharomyces Pombe
Length = 450
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 38/77 (49%)
Query: 376 KLFSVQDFFRYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSH 435
K+F++ + G+RF+ ++ + +V +E E R P++Y + TRS+
Sbjct: 24 KVFALASSNAVAQRWGKRFYAPIETETPHKVGVEFEESKDRIFTSPQKYVQGRHAFTRSY 83
Query: 436 LFSKSFGWKQFLSLMEQ 452
++ K + K + L +Q
Sbjct: 84 MYVKKWATKSAVVLADQ 100
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK 417
FEELD++GDG+V+ E+ ++ ++K
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK 417
FEELD++GDG+V+ E+ ++ ++K
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK 417
FEELD++GDG+V+ E+ ++ ++K
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK 417
FEELD++GDG+V+ E+ ++ ++K
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK 417
FEELD++GDG+V+ E+ ++ ++K
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK 417
FEELD++GDG+V+ E+ ++ ++K
Sbjct: 48 ELFEELDKNGDGEVSFEEFQVLVKK 72
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK 417
FEELD++GDG+V+ E+ ++ ++K
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK 417
FEELD++GDG+V+ E+ ++ ++K
Sbjct: 49 ELFEELDKNGDGEVSFEEFQVLVKK 73
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 20/25 (80%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK 417
FEELD++GDG+V+ E+ ++ ++K
Sbjct: 47 ELFEELDKNGDGEVSFEEFQVLVKK 71
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 11/137 (8%)
Query: 390 EGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLF---SKSFGWKQF 446
E R F+ D DG G ++ ++L++AM R L +E +++ S + S + +++F
Sbjct: 29 EIREAFDLFDTDGSGTIDAKELKVAM--RALGFEPKKEEIKKMISEIDKDGSGTIDFEEF 86
Query: 447 LSLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFL 500
L++M K IL+A+ SGT+ ++ K G EE M+
Sbjct: 87 LTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEA 146
Query: 501 NADTEESISYGHFRNFM 517
+ + + I F M
Sbjct: 147 DRNDDNEIDEDEFIRIM 163
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 12/112 (10%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK---RKLPRRYAREFMRRTRSHLFSKSFGWKQFLSL 449
++F +DRD G + + +L + R P+ R M R F+ + +F+++
Sbjct: 55 QWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALR--MMRIFDTDFNGHISFYEFMAM 112
Query: 450 MEQKEPTILRAYTSLCL---SKSGTLQKSEILASLKNAGLPANEENAVAMMR 498
+ E AY + ++SGTL+ EIL +L+ G N+ ++ + R
Sbjct: 113 YKFME----LAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHR 160
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 468 KSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHF 513
+SGTL+ +E++ G+ + + A+ MMR + D IS+ F
Sbjct: 64 RSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEF 109
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 393 RFFEELDRDGDGQVNLEDLEIAMRK 417
FEELD+ GDG+V+ E+ ++ ++K
Sbjct: 48 ELFEELDKAGDGEVSFEEFQVLVKK 72
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 10/24 (41%), Positives = 20/24 (83%)
Query: 394 FFEELDRDGDGQVNLEDLEIAMRK 417
F+ELD++GDG+V+ E+ ++ ++K
Sbjct: 52 LFQELDKNGDGEVSFEEFQVLVKK 75
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 390 EGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFG---WKQF 446
E R F+ D DG G +++++L++AM R L +E +++ S + + G + F
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAM--RALGFEPKKEEIKKMISEIDKEGTGKMNFGDF 64
Query: 447 LSLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFL 500
L++M QK + IL+A+ ++G + + K G +E M+
Sbjct: 65 LTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA 124
Query: 501 NADTEESISYGHFRNFM 517
+ D + +S F M
Sbjct: 125 DRDGDGEVSEQEFLRIM 141
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 11/71 (15%)
Query: 356 ELIELLPQLGRTSKDHPD---------KKKLFSVQDFFRYTEAEGRRFFEELDRDGDGQV 406
ELIEL Q+ H D K L D E R F E D +GDG++
Sbjct: 62 ELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKEL--RDAFREFDTNGDGEI 119
Query: 407 NLEDLEIAMRK 417
+ +L AMRK
Sbjct: 120 STSELREAMRK 130
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 11/71 (15%)
Query: 356 ELIELLPQLGRTSKDHPD---------KKKLFSVQDFFRYTEAEGRRFFEELDRDGDGQV 406
ELIEL Q+ H D K L D E R F E D +GDG++
Sbjct: 48 ELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKEL--RDAFREFDTNGDGEI 105
Query: 407 NLEDLEIAMRK 417
+ +L AMRK
Sbjct: 106 STSELREAMRK 116
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 11/133 (8%)
Query: 395 FEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFG---WKQFLSLME 451
F D+DGDG + +L M R L + +R S + G + +FL +M
Sbjct: 16 FSLFDKDGDGCITTRELGTVM--RSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMA 73
Query: 452 QK------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTE 505
+K E I A+ +G + +E+ + G ++E M+R + D +
Sbjct: 74 RKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGD 133
Query: 506 ESISYGHFRNFMV 518
++Y F +V
Sbjct: 134 GQVNYEEFVRVLV 146
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 468 KSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHF 513
+SGTL+ +E++ G+ + + A+ MMR + D IS+ F
Sbjct: 64 RSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEF 109
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 29.3 bits (64), Expect = 6.2, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 390 EGRRFFEELDRDGDGQVNLEDLEIAMRK 417
E R F E D +GDG+++ +L AMRK
Sbjct: 8 ELRDAFREFDTNGDGEISTSELREAMRK 35
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 29.3 bits (64), Expect = 6.6, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 387 TEAEGRRFFEELDRDGDGQVNLEDLE 412
T+AE + F + D+DGDG++ +++ E
Sbjct: 79 TDAETKAFLKAADKDGDGKIGIDEFE 104
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 28.9 bits (63), Expect = 8.4, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 326 SAQKVASGILSIPLSNVERLRSTLSTVSLTELIELLPQLGRTSKDHPDKKKLFSVQDFFR 385
+A + GI ++P E+ + L E+ E R K++L +
Sbjct: 7 TAALMYRGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLG 66
Query: 386 Y--TEAEGRRFFEELDRDGDGQVNLEDL 411
Y E E + LD DGDGQV+ E+
Sbjct: 67 YMPNEVELEVIIQRLDMDGDGQVDFEEF 94
>pdb|2A5Y|B Chain B, Structure Of A Ced-4CED-9 Complex
pdb|2A5Y|C Chain C, Structure Of A Ced-4CED-9 Complex
pdb|3LQQ|A Chain A, Structure Of The Ced-4 Apoptosome
pdb|3LQQ|B Chain B, Structure Of The Ced-4 Apoptosome
pdb|3LQR|A Chain A, Structure Of Ced-4:ced-3 Complex
pdb|3LQR|B Chain B, Structure Of Ced-4:ced-3 Complex
Length = 549
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 152 FVQSFPSPFKMGKKR---IQKLGEEDKGHLSSCVDGTKSKVSCEFKRNELKGQLDNACKN 208
F++++ P +G+K + K E G+ ++ + KS CE K E QL+N ++
Sbjct: 301 FLEAYGMPMPVGEKEEDVLNKTIELSSGNPATLMMFFKS---CEPKTFEKMAQLNNKLES 357
Query: 209 DGGAGKEGKPVLLECFIGFVFDQLIQNLQKFDQLMQESDQKG 250
G G +EC + + L LQ+ +++ + D+
Sbjct: 358 RGLVG-------VECITPYSYKSLAMALQRCVEVLSDEDRSA 392
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,531,366
Number of Sequences: 62578
Number of extensions: 539192
Number of successful extensions: 1862
Number of sequences better than 100.0: 88
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 1614
Number of HSP's gapped (non-prelim): 295
length of query: 581
length of database: 14,973,337
effective HSP length: 104
effective length of query: 477
effective length of database: 8,465,225
effective search space: 4037912325
effective search space used: 4037912325
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)