Query 008009
Match_columns 581
No_of_seqs 375 out of 3015
Neff 5.7
Searched_HMMs 46136
Date Thu Mar 28 18:16:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008009.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008009hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0036 Predicted mitochondria 100.0 2.4E-31 5.3E-36 277.6 15.1 191 387-580 12-214 (463)
2 COG5126 FRQ1 Ca2+-binding prot 99.8 2.4E-18 5.2E-23 163.1 15.3 131 389-521 20-158 (160)
3 KOG0027 Calmodulin and related 99.8 2.5E-18 5.4E-23 161.4 15.1 131 388-519 7-149 (151)
4 KOG0036 Predicted mitochondria 99.7 6.2E-18 1.3E-22 177.7 11.5 206 350-581 29-310 (463)
5 PTZ00183 centrin; Provisional 99.7 2.4E-16 5.3E-21 146.0 15.4 134 387-521 15-156 (158)
6 PTZ00184 calmodulin; Provision 99.7 7.5E-16 1.6E-20 140.6 15.5 130 388-518 10-147 (149)
7 KOG0028 Ca2+-binding protein ( 99.6 5.8E-15 1.3E-19 138.5 13.9 131 388-519 32-170 (172)
8 KOG0037 Ca2+-binding protein, 99.5 1.6E-13 3.4E-18 134.9 14.2 133 387-521 55-190 (221)
9 KOG0031 Myosin regulatory ligh 99.5 6.8E-13 1.5E-17 124.0 14.3 126 388-518 31-164 (171)
10 KOG0034 Ca2+/calmodulin-depend 99.5 8.6E-13 1.9E-17 128.8 14.4 131 389-522 33-178 (187)
11 KOG0044 Ca2+ sensor (EF-Hand s 99.5 7.1E-13 1.5E-17 129.8 13.3 138 384-522 21-178 (193)
12 KOG0751 Mitochondrial aspartat 99.3 6.7E-13 1.5E-17 142.0 5.1 125 387-515 106-240 (694)
13 KOG0030 Myosin essential light 99.3 2.2E-11 4.8E-16 112.2 11.7 129 389-518 11-150 (152)
14 KOG0027 Calmodulin and related 99.1 9.4E-10 2E-14 103.3 12.0 115 350-483 23-149 (151)
15 PTZ00183 centrin; Provisional 99.0 3E-09 6.5E-14 98.5 13.3 115 350-483 32-154 (158)
16 KOG0377 Protein serine/threoni 99.0 2E-09 4.3E-14 114.7 13.2 130 389-521 464-617 (631)
17 KOG0037 Ca2+-binding protein, 99.0 2.2E-08 4.8E-13 98.9 17.9 142 348-517 70-218 (221)
18 PF13499 EF-hand_7: EF-hand do 99.0 2E-09 4.4E-14 86.6 7.4 62 456-517 1-66 (66)
19 COG5126 FRQ1 Ca2+-binding prot 99.0 8E-09 1.7E-13 98.5 12.5 122 342-483 19-156 (160)
20 PTZ00184 calmodulin; Provision 98.9 1.1E-08 2.4E-13 93.2 12.3 114 350-482 26-147 (149)
21 cd05022 S-100A13 S-100A13: S-1 98.9 5E-09 1.1E-13 90.9 7.2 65 455-519 8-75 (89)
22 KOG4223 Reticulocalbin, calume 98.8 6E-09 1.3E-13 107.9 8.2 124 392-516 166-302 (325)
23 PF08976 DUF1880: Domain of un 98.8 3.8E-10 8.2E-15 101.1 -1.0 91 260-352 6-112 (118)
24 KOG4223 Reticulocalbin, calume 98.8 2.4E-08 5.3E-13 103.5 11.4 134 387-521 75-230 (325)
25 PLN02964 phosphatidylserine de 98.7 4.9E-08 1.1E-12 110.9 11.7 109 384-497 138-271 (644)
26 cd05027 S-100B S-100B: S-100B 98.7 4.1E-08 8.8E-13 84.9 8.2 64 455-518 8-78 (88)
27 KOG0028 Ca2+-binding protein ( 98.7 1.7E-07 3.7E-12 88.7 12.0 115 350-483 48-170 (172)
28 PF13499 EF-hand_7: EF-hand do 98.6 1E-07 2.2E-12 76.6 7.3 60 390-450 1-66 (66)
29 cd05031 S-100A10_like S-100A10 98.6 1.6E-07 3.4E-12 81.6 8.0 64 455-518 8-78 (94)
30 cd05025 S-100A1 S-100A1: S-100 98.6 2.1E-07 4.5E-12 80.4 8.4 66 454-519 8-80 (92)
31 KOG2643 Ca2+ binding protein, 98.6 6.9E-08 1.5E-12 103.3 6.0 111 351-482 215-345 (489)
32 KOG0038 Ca2+-binding kinase in 98.6 4.5E-07 9.7E-12 84.7 10.6 144 376-522 12-180 (189)
33 cd00052 EH Eps15 homology doma 98.6 2.5E-07 5.5E-12 73.9 7.7 61 458-520 2-62 (67)
34 cd05026 S-100Z S-100Z: S-100Z 98.6 2.5E-07 5.4E-12 80.6 8.2 65 455-519 10-81 (93)
35 cd05029 S-100A6 S-100A6: S-100 98.5 2.8E-07 6E-12 79.7 8.2 65 455-519 10-79 (88)
36 KOG0044 Ca2+ sensor (EF-Hand s 98.5 6.7E-07 1.4E-11 88.0 11.4 116 403-518 6-127 (193)
37 cd00051 EFh EF-hand, calcium b 98.5 4E-07 8.7E-12 69.4 7.6 61 457-517 2-62 (63)
38 cd05022 S-100A13 S-100A13: S-1 98.5 2.5E-07 5.5E-12 80.3 6.8 64 389-453 8-76 (89)
39 PF13833 EF-hand_8: EF-hand do 98.5 3E-07 6.4E-12 71.4 6.6 51 468-518 1-52 (54)
40 cd00052 EH Eps15 homology doma 98.5 3.9E-07 8.5E-12 72.7 6.6 59 392-451 2-60 (67)
41 cd00213 S-100 S-100: S-100 dom 98.5 5.7E-07 1.2E-11 76.7 7.6 65 455-519 8-79 (88)
42 smart00027 EH Eps15 homology d 98.4 7.6E-07 1.7E-11 77.5 8.3 63 455-519 10-72 (96)
43 smart00027 EH Eps15 homology d 98.4 9.3E-07 2E-11 77.0 7.6 64 388-452 9-72 (96)
44 cd05023 S-100A11 S-100A11: S-1 98.3 1.7E-06 3.8E-11 75.0 8.1 65 455-519 9-80 (89)
45 cd05027 S-100B S-100B: S-100B 98.3 1.8E-06 3.9E-11 74.7 7.4 63 389-452 8-79 (88)
46 PLN02964 phosphatidylserine de 98.3 5.2E-06 1.1E-10 94.7 12.0 119 397-520 115-244 (644)
47 cd00252 SPARC_EC SPARC_EC; ext 98.3 2.6E-06 5.6E-11 77.5 7.8 63 454-521 47-109 (116)
48 KOG0034 Ca2+/calmodulin-depend 98.2 1.1E-05 2.4E-10 79.2 11.1 93 391-484 68-176 (187)
49 cd05025 S-100A1 S-100A1: S-100 98.2 4.5E-06 9.8E-11 72.1 7.5 66 387-453 7-81 (92)
50 cd05026 S-100Z S-100Z: S-100Z 98.2 6.6E-06 1.4E-10 71.7 8.5 64 389-453 10-82 (93)
51 cd05031 S-100A10_like S-100A10 98.2 5.6E-06 1.2E-10 71.9 7.1 65 388-453 7-80 (94)
52 KOG0040 Ca2+-binding actin-bun 98.1 1.7E-05 3.7E-10 94.4 12.6 136 375-519 2236-2398(2399)
53 KOG0041 Predicted Ca2+-binding 98.1 6.7E-06 1.4E-10 80.6 7.9 80 443-522 87-166 (244)
54 cd00051 EFh EF-hand, calcium b 98.1 1E-05 2.3E-10 61.5 6.5 59 391-450 2-62 (63)
55 cd00213 S-100 S-100: S-100 dom 98.1 1.3E-05 2.9E-10 68.3 7.6 65 388-453 7-80 (88)
56 cd05029 S-100A6 S-100A6: S-100 98.1 1.2E-05 2.7E-10 69.5 7.4 62 390-452 11-79 (88)
57 cd05030 calgranulins Calgranul 98.1 1.1E-05 2.4E-10 69.5 7.1 65 455-519 8-79 (88)
58 KOG4251 Calcium binding protei 98.0 2.2E-05 4.9E-10 79.0 8.2 133 385-518 97-308 (362)
59 cd00252 SPARC_EC SPARC_EC; ext 98.0 2.3E-05 5.1E-10 71.3 7.5 62 386-450 45-106 (116)
60 PF13833 EF-hand_8: EF-hand do 97.9 1.5E-05 3.2E-10 61.8 5.1 50 402-452 1-53 (54)
61 cd05023 S-100A11 S-100A11: S-1 97.9 3.3E-05 7.2E-10 67.0 7.3 63 389-452 9-80 (89)
62 PF14658 EF-hand_9: EF-hand do 97.8 4.7E-05 1E-09 62.6 6.5 60 459-518 2-63 (66)
63 KOG2562 Protein phosphatase 2 97.8 7.8E-05 1.7E-09 80.9 9.9 119 395-515 284-420 (493)
64 KOG0030 Myosin essential light 97.6 0.00021 4.6E-09 66.7 8.0 99 350-450 26-149 (152)
65 KOG0031 Myosin regulatory ligh 97.6 0.00035 7.6E-09 66.2 9.0 61 454-518 31-91 (171)
66 KOG0041 Predicted Ca2+-binding 97.6 0.00021 4.6E-09 70.3 7.5 62 389-451 99-162 (244)
67 KOG2643 Ca2+ binding protein, 97.6 0.00018 3.8E-09 77.8 7.5 120 398-522 208-349 (489)
68 PF00036 EF-hand_1: EF hand; 97.5 0.00011 2.4E-09 50.8 3.8 29 390-418 1-29 (29)
69 cd05030 calgranulins Calgranul 97.5 0.00028 6.1E-09 60.8 6.8 62 390-452 9-79 (88)
70 PF00036 EF-hand_1: EF hand; 97.5 0.00014 3.1E-09 50.2 3.7 27 457-483 2-28 (29)
71 PRK12309 transaldolase/EF-hand 97.4 0.0013 2.8E-08 71.5 12.1 52 454-518 333-384 (391)
72 cd05024 S-100A10 S-100A10: A s 97.4 0.00081 1.8E-08 58.8 8.3 64 455-519 8-76 (91)
73 KOG2562 Protein phosphatase 2 97.4 0.0014 2.9E-08 71.6 11.3 150 388-545 173-365 (493)
74 KOG4666 Predicted phosphate ac 97.3 0.00022 4.8E-09 74.5 5.0 119 401-524 239-364 (412)
75 KOG1029 Endocytic adaptor prot 97.3 0.0019 4E-08 73.8 11.4 63 455-519 195-257 (1118)
76 PF13405 EF-hand_6: EF-hand do 97.3 0.00036 7.8E-09 48.4 3.7 30 456-485 1-31 (31)
77 KOG0752 Mitochondrial solute c 97.2 7.2E-05 1.6E-09 78.9 0.1 30 552-581 125-154 (320)
78 PF13405 EF-hand_6: EF-hand do 97.2 0.00055 1.2E-08 47.5 3.8 30 390-419 1-31 (31)
79 PF14658 EF-hand_9: EF-hand do 97.0 0.0011 2.3E-08 54.6 5.1 59 394-452 3-64 (66)
80 PF12763 EF-hand_4: Cytoskelet 97.0 0.0015 3.3E-08 58.4 6.5 62 388-451 9-70 (104)
81 KOG0751 Mitochondrial aspartat 97.0 0.0079 1.7E-07 66.1 12.2 133 386-519 30-207 (694)
82 KOG0377 Protein serine/threoni 96.9 0.0016 3.4E-08 70.6 6.6 61 388-449 546-612 (631)
83 KOG0169 Phosphoinositide-speci 96.7 0.015 3.2E-07 67.0 12.0 131 387-519 134-274 (746)
84 PF14788 EF-hand_10: EF hand; 96.6 0.006 1.3E-07 47.8 5.9 48 472-519 2-49 (51)
85 PF13202 EF-hand_5: EF hand; P 96.6 0.0025 5.5E-08 42.5 3.2 23 458-480 2-24 (25)
86 PF13202 EF-hand_5: EF hand; P 96.5 0.0031 6.7E-08 42.1 3.2 25 391-415 1-25 (25)
87 cd05024 S-100A10 S-100A10: A s 96.5 0.011 2.4E-07 51.8 7.5 62 390-453 9-77 (91)
88 PF12763 EF-hand_4: Cytoskelet 96.4 0.012 2.6E-07 52.7 7.3 62 455-519 10-71 (104)
89 PRK12309 transaldolase/EF-hand 96.3 0.0061 1.3E-07 66.4 6.2 49 424-481 335-383 (391)
90 PF14788 EF-hand_10: EF hand; 96.2 0.01 2.2E-07 46.5 5.1 34 384-417 16-49 (51)
91 PF00153 Mito_carr: Mitochondr 96.0 0.00084 1.8E-08 57.2 -2.2 29 552-580 3-31 (95)
92 KOG0038 Ca2+-binding kinase in 95.9 0.023 5E-07 53.7 7.0 90 394-484 76-178 (189)
93 PF10591 SPARC_Ca_bdg: Secrete 95.8 0.0039 8.4E-08 56.5 1.4 60 454-515 53-112 (113)
94 KOG0752 Mitochondrial solute c 95.7 0.0023 4.9E-08 67.8 -0.6 28 554-581 224-251 (320)
95 KOG1029 Endocytic adaptor prot 95.7 0.036 7.9E-07 63.7 8.5 62 389-451 195-256 (1118)
96 KOG4251 Calcium binding protei 95.6 0.017 3.8E-07 58.6 5.4 57 423-480 101-165 (362)
97 KOG4065 Uncharacterized conser 95.5 0.023 4.9E-07 51.8 4.9 57 460-516 72-142 (144)
98 PF10591 SPARC_Ca_bdg: Secrete 95.4 0.0061 1.3E-07 55.3 1.2 57 390-447 55-111 (113)
99 PTZ00168 mitochondrial carrier 95.2 0.0043 9.2E-08 63.4 -0.7 28 554-581 180-207 (259)
100 KOG0040 Ca2+-binding actin-bun 95.0 0.06 1.3E-06 65.7 7.8 68 457-524 2255-2329(2399)
101 KOG0046 Ca2+-binding actin-bun 95.0 0.056 1.2E-06 60.1 7.0 65 455-520 19-86 (627)
102 KOG0750 Mitochondrial solute c 94.9 0.0062 1.3E-07 62.3 -0.5 30 552-581 210-239 (304)
103 KOG0768 Mitochondrial carrier 94.9 0.0062 1.4E-07 64.0 -0.5 28 554-581 228-255 (323)
104 KOG0761 Mitochondrial carrier 94.6 0.0081 1.7E-07 63.2 -0.4 28 553-580 262-289 (361)
105 KOG0760 Mitochondrial carrier 94.5 0.0076 1.6E-07 62.0 -1.1 30 552-581 201-230 (302)
106 smart00054 EFh EF-hand, calciu 94.4 0.052 1.1E-06 34.5 3.3 27 391-417 2-28 (29)
107 PF09279 EF-hand_like: Phospho 94.4 0.098 2.1E-06 44.1 5.8 62 457-519 2-69 (83)
108 smart00054 EFh EF-hand, calciu 94.2 0.066 1.4E-06 34.0 3.4 27 457-483 2-28 (29)
109 PTZ00168 mitochondrial carrier 93.6 0.015 3.2E-07 59.5 -1.0 28 554-581 85-112 (259)
110 KOG0046 Ca2+-binding actin-bun 93.1 0.2 4.3E-06 56.0 6.6 60 390-451 20-84 (627)
111 KOG0770 Predicted mitochondria 93.0 0.024 5.2E-07 58.2 -0.5 29 553-581 32-60 (353)
112 KOG0762 Mitochondrial carrier 93.0 0.021 4.4E-07 58.0 -1.0 27 555-581 203-229 (311)
113 PTZ00169 ADP/ATP transporter o 92.9 0.019 4.1E-07 59.7 -1.4 28 554-581 114-141 (300)
114 PF09279 EF-hand_like: Phospho 92.9 0.22 4.8E-06 42.0 5.3 63 390-453 1-70 (83)
115 KOG4666 Predicted phosphate ac 92.4 0.22 4.7E-06 52.7 5.5 96 389-485 259-361 (412)
116 KOG0770 Predicted mitochondria 91.3 0.049 1.1E-06 56.1 -0.6 29 553-581 235-263 (353)
117 PTZ00169 ADP/ATP transporter o 90.8 0.047 1E-06 56.8 -1.3 28 554-581 211-238 (300)
118 KOG0756 Mitochondrial tricarbo 90.8 0.063 1.4E-06 56.1 -0.4 28 554-581 210-237 (299)
119 PF05042 Caleosin: Caleosin re 89.9 3 6.5E-05 40.8 10.2 95 390-484 8-125 (174)
120 KOG0035 Ca2+-binding actin-bun 89.3 1.6 3.4E-05 52.1 9.3 92 386-479 744-848 (890)
121 KOG0758 Mitochondrial carnitin 89.1 0.093 2E-06 54.8 -0.7 29 553-581 209-237 (297)
122 KOG0753 Mitochondrial fatty ac 88.4 0.19 4.1E-06 52.6 1.0 30 552-581 123-152 (317)
123 KOG1955 Ral-GTPase effector RA 87.9 3 6.5E-05 46.6 9.7 72 379-451 218-292 (737)
124 KOG0765 Predicted mitochondria 87.7 0.11 2.5E-06 54.0 -1.1 29 553-581 246-274 (333)
125 KOG4065 Uncharacterized conser 87.6 1.2 2.5E-05 41.0 5.3 61 387-448 64-141 (144)
126 KOG1707 Predicted Ras related/ 84.1 4.7 0.0001 46.1 9.0 127 388-517 194-375 (625)
127 KOG0762 Mitochondrial carrier 83.5 0.3 6.5E-06 49.9 -0.5 31 551-581 102-132 (311)
128 PF09069 EF-hand_3: EF-hand; 82.6 7.3 0.00016 34.2 7.8 66 454-522 2-78 (90)
129 KOG0749 Mitochondrial ADP/ATP 81.7 0.42 9.1E-06 49.5 -0.2 28 554-581 116-143 (298)
130 KOG1955 Ral-GTPase effector RA 81.2 2.2 4.8E-05 47.6 5.0 65 454-520 230-294 (737)
131 PLN02952 phosphoinositide phos 80.7 6.6 0.00014 45.4 8.8 81 438-519 14-110 (599)
132 KOG3555 Ca2+-binding proteogly 80.7 1.9 4.2E-05 46.1 4.2 61 455-519 250-310 (434)
133 KOG0768 Mitochondrial carrier 79.2 0.69 1.5E-05 49.0 0.4 30 552-581 53-82 (323)
134 KOG0766 Predicted mitochondria 78.5 0.57 1.2E-05 47.4 -0.4 28 554-581 214-241 (297)
135 KOG0998 Synaptic vesicle prote 76.8 2 4.4E-05 51.6 3.4 66 455-522 283-348 (847)
136 KOG3555 Ca2+-binding proteogly 76.7 5.4 0.00012 42.9 6.1 95 390-485 212-312 (434)
137 KOG0169 Phosphoinositide-speci 76.6 13 0.00027 43.9 9.4 94 422-520 135-233 (746)
138 PF05517 p25-alpha: p25-alpha 76.6 11 0.00023 36.1 7.6 63 458-520 2-70 (154)
139 KOG4578 Uncharacterized conser 76.1 2 4.3E-05 45.8 2.6 60 392-452 336-398 (421)
140 KOG2243 Ca2+ release channel ( 75.1 11 0.00023 46.9 8.3 58 459-517 4061-4118(5019)
141 KOG0759 Mitochondrial oxogluta 73.6 0.86 1.9E-05 47.5 -0.7 30 552-581 196-225 (286)
142 PF08726 EFhand_Ca_insen: Ca2+ 73.6 1.6 3.5E-05 36.4 1.1 53 455-515 6-65 (69)
143 KOG0042 Glycerol-3-phosphate d 73.4 5.2 0.00011 45.6 5.2 65 457-521 595-659 (680)
144 KOG4578 Uncharacterized conser 72.9 2.5 5.5E-05 45.0 2.5 64 457-522 335-401 (421)
145 KOG0761 Mitochondrial carrier 72.5 0.72 1.6E-05 49.0 -1.6 25 557-581 160-184 (361)
146 KOG3866 DNA-binding protein of 69.9 11 0.00024 40.1 6.3 60 459-518 248-323 (442)
147 KOG0764 Mitochondrial FAD carr 69.9 1.8 3.9E-05 45.2 0.6 30 552-581 104-133 (299)
148 KOG0754 Mitochondrial oxodicar 67.9 1.9 4.2E-05 44.3 0.4 35 547-581 196-230 (294)
149 KOG0750 Mitochondrial solute c 67.8 1.4 2.9E-05 45.7 -0.7 28 554-581 113-140 (304)
150 KOG1265 Phospholipase C [Lipid 66.4 79 0.0017 38.3 12.7 121 398-519 157-299 (1189)
151 PRK09430 djlA Dna-J like membr 65.6 52 0.0011 34.3 10.4 128 402-534 68-222 (267)
152 KOG0763 Mitochondrial ornithin 65.4 1.7 3.6E-05 44.1 -0.6 28 554-581 217-244 (301)
153 KOG3866 DNA-binding protein of 65.2 7 0.00015 41.5 3.8 26 392-417 247-272 (442)
154 KOG0757 Mitochondrial carrier 64.7 2.7 5.8E-05 43.9 0.7 28 554-581 128-155 (319)
155 KOG0035 Ca2+-binding actin-bun 64.4 13 0.00027 44.8 6.1 66 454-519 746-816 (890)
156 cd08315 Death_TRAILR_DR4_DR5 D 64.1 81 0.0018 27.8 9.8 89 388-498 3-91 (96)
157 KOG0998 Synaptic vesicle prote 62.8 9.9 0.00021 45.8 5.0 127 389-519 11-190 (847)
158 PF14513 DAG_kinase_N: Diacylg 62.5 16 0.00034 34.6 5.3 53 383-435 19-81 (138)
159 KOG0754 Mitochondrial oxodicar 62.4 2.8 6.2E-05 43.1 0.4 28 554-581 107-134 (294)
160 PF05517 p25-alpha: p25-alpha 62.0 21 0.00045 34.1 6.1 60 392-452 2-69 (154)
161 KOG4347 GTPase-activating prot 61.2 8.5 0.00018 44.5 3.8 53 423-477 555-612 (671)
162 PLN02952 phosphoinositide phos 60.2 34 0.00073 39.8 8.5 78 403-482 14-109 (599)
163 PF05042 Caleosin: Caleosin re 60.0 29 0.00063 34.1 6.8 33 488-520 93-125 (174)
164 KOG0758 Mitochondrial carnitin 57.4 3.6 7.9E-05 43.3 0.2 28 554-581 109-136 (297)
165 cd07313 terB_like_2 tellurium 57.1 43 0.00093 29.0 6.9 73 403-478 13-95 (104)
166 KOG0042 Glycerol-3-phosphate d 54.8 18 0.00039 41.5 5.0 71 382-453 583-658 (680)
167 KOG4347 GTPase-activating prot 53.4 16 0.00035 42.3 4.4 59 454-513 554-612 (671)
168 KOG0753 Mitochondrial fatty ac 53.4 4.3 9.4E-05 42.8 -0.1 30 552-581 224-253 (317)
169 KOG0039 Ferric reductase, NADH 53.1 21 0.00045 41.8 5.4 82 438-521 2-91 (646)
170 KOG1519 Predicted mitochondria 52.5 2.6 5.5E-05 42.1 -1.8 30 552-581 210-239 (297)
171 KOG2243 Ca2+ release channel ( 52.0 19 0.00042 44.8 4.8 58 394-452 4062-4120(5019)
172 PF09069 EF-hand_3: EF-hand; 50.7 69 0.0015 28.2 7.0 29 388-417 2-30 (90)
173 PF08726 EFhand_Ca_insen: Ca2+ 49.0 10 0.00022 31.7 1.5 57 388-450 5-67 (69)
174 KOG0757 Mitochondrial carrier 47.7 6.2 0.00013 41.4 0.0 56 510-581 206-261 (319)
175 PF09068 EF-hand_2: EF hand; 45.8 82 0.0018 29.2 7.1 77 390-483 42-125 (127)
176 KOG0767 Mitochondrial phosphat 45.6 6.9 0.00015 41.0 -0.0 25 557-581 42-66 (333)
177 cd08316 Death_FAS_TNFRSF6 Deat 44.0 1.5E+02 0.0032 26.4 8.1 78 404-498 16-93 (97)
178 KOG0764 Mitochondrial FAD carr 43.4 5.3 0.00012 41.9 -1.2 28 554-581 207-234 (299)
179 KOG2871 Uncharacterized conser 40.1 18 0.00039 39.4 2.1 63 454-516 308-371 (449)
180 COG4103 Uncharacterized protei 36.5 1.8E+02 0.0038 27.9 7.7 86 393-483 34-129 (148)
181 PF14513 DAG_kinase_N: Diacylg 36.4 36 0.00077 32.2 3.2 32 471-502 48-80 (138)
182 PLN02222 phosphoinositide phos 36.3 83 0.0018 36.6 6.7 64 387-452 23-90 (581)
183 PF08976 DUF1880: Domain of un 34.7 28 0.00061 32.1 2.1 34 487-520 3-36 (118)
184 PF05099 TerB: Tellurite resis 33.8 49 0.0011 30.0 3.7 72 402-476 36-117 (140)
185 PLN02228 Phosphoinositide phos 33.6 1.2E+02 0.0026 35.2 7.4 64 454-519 23-92 (567)
186 KOG0769 Predicted mitochondria 32.9 8.8 0.00019 40.1 -1.5 27 554-580 205-231 (308)
187 KOG0769 Predicted mitochondria 32.3 11 0.00025 39.4 -0.9 29 553-581 102-130 (308)
188 KOG1707 Predicted Ras related/ 32.1 1.3E+02 0.0028 35.0 7.2 32 493-524 317-348 (625)
189 PLN02222 phosphoinositide phos 32.0 1.1E+02 0.0024 35.5 6.9 64 454-519 24-90 (581)
190 PLN02228 Phosphoinositide phos 29.0 1.5E+02 0.0032 34.5 7.1 65 386-452 21-92 (567)
191 PF11116 DUF2624: Protein of u 28.6 1.9E+02 0.0041 25.3 6.1 48 470-517 13-60 (85)
192 PF07308 DUF1456: Protein of u 26.0 1.5E+02 0.0033 24.6 4.9 46 472-517 14-59 (68)
193 PLN02230 phosphoinositide phos 25.7 2E+02 0.0044 33.6 7.5 65 454-519 28-102 (598)
194 PF01535 PPR: PPR repeat; Int 25.6 27 0.00059 22.7 0.4 13 143-155 1-13 (31)
195 cd07316 terB_like_DjlA N-termi 24.4 4E+02 0.0087 22.7 7.7 73 402-477 12-95 (106)
196 KOG4004 Matricellular protein 23.8 46 0.001 33.5 1.7 56 461-518 193-249 (259)
197 PF04282 DUF438: Family of unk 22.2 3.7E+02 0.008 22.7 6.5 41 388-432 15-58 (71)
198 cd08313 Death_TNFR1 Death doma 21.4 3.6E+02 0.0077 23.1 6.4 66 405-488 8-74 (80)
199 PLN02230 phosphoinositide phos 21.2 2.4E+02 0.0053 33.0 7.0 65 387-452 27-102 (598)
200 COG4103 Uncharacterized protei 20.5 1.3E+02 0.0028 28.8 3.8 74 459-534 34-110 (148)
201 PF00046 Homeobox: Homeobox do 20.3 2.5E+02 0.0055 21.3 5.0 45 385-431 6-50 (57)
No 1
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.97 E-value=2.4e-31 Score=277.61 Aligned_cols=191 Identities=25% Similarity=0.464 Sum_probs=177.8
Q ss_pred cHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCC---HHHHHHHHHhhcCCCCCCCcchHHHHhhhccchhHHHHHHHH
Q 008009 387 TEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLP---RRYAREFMRRTRSHLFSKSFGWKQFLSLMEQKEPTILRAYTS 463 (581)
Q Consensus 387 te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~---~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ee~Lr~aFk~ 463 (581)
.+.+++.+|+.+|.+++|+++..++...+..++++ .+.++.+|..+|.| .||+++|.||..++..++.++.++|..
T Consensus 12 r~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~-~dg~vDy~eF~~Y~~~~E~~l~~~F~~ 90 (463)
T KOG0036|consen 12 RDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDAN-RDGRVDYSEFKRYLDNKELELYRIFQS 90 (463)
T ss_pred HHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccC-cCCcccHHHHHHHHHHhHHHHHHHHhh
Confidence 35678899999999999999999999999999754 57889999999999 899999999999999999999999999
Q ss_pred HcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCCCCCCccchHHHHHhcCeeecCC
Q 008009 464 LCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLPSDRLQDDPRSIWFEAATVVAVP 543 (581)
Q Consensus 464 ~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~Ps~~l~d~irs~W~e~~tvidV~ 543 (581)
+|.++||.|+.+|+.+.|+.+|+.++++++.++++.+|+++++.|+++||++++++.|.+++.++.. +| ++..+++++
T Consensus 91 iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p~s~i~di~~-~W-~h~~~idig 168 (463)
T KOG0036|consen 91 IDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYPESDLEDIYD-FW-RHVLLIDIG 168 (463)
T ss_pred hccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCChhHHHHHHH-hh-hhheEEEcc
Confidence 9999999999999999999999999999999999999999999999999999999999988866554 99 467889999
Q ss_pred CCcccc---------CcchhhhhhhchhhhhhhccccCccccccCC
Q 008009 544 PPVEIP---------AGSVLKSALAGGLSCALSTSLMHPVDTIKAN 580 (581)
Q Consensus 544 ~~~~I~---------sg~~~k~fLAGGiAGAvSrT~taPLDrlKTR 580 (581)
+...+| ++.||++|+|||+||||||||||||||||+.
T Consensus 169 E~~~iPdg~s~~e~~~g~ww~~liAGGiAGavSRTcTAPlDRLKV~ 214 (463)
T KOG0036|consen 169 EDAVLPDGDSKLENDSGRWWGFLIAGGIAGAVSRTCTAPLDRLKVF 214 (463)
T ss_pred ccccCCcchHHHHhcccchhhhhccccccccccccccCchhhhhee
Confidence 988777 4579999999999999999999999999985
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.78 E-value=2.4e-18 Score=163.14 Aligned_cols=131 Identities=20% Similarity=0.351 Sum_probs=122.7
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------hhHHHHH
Q 008009 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKRK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------EPTILRA 460 (581)
Q Consensus 389 ~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------ee~Lr~a 460 (581)
++++++|..+|++++|.|+..||..+++.+| .+..++..++..+|. +.+.|+|.+|+.+|... ++.++.+
T Consensus 20 ~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~--~~~~idf~~Fl~~ms~~~~~~~~~Eel~~a 97 (160)
T COG5126 20 QELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA--GNETVDFPEFLTVMSVKLKRGDKEEELREA 97 (160)
T ss_pred HHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC--CCCccCHHHHHHHHHHHhccCCcHHHHHHH
Confidence 5678889999999999999999999999997 577999999999987 58999999999998865 7899999
Q ss_pred HHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCC
Q 008009 461 YTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLP 521 (581)
Q Consensus 461 Fk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~P 521 (581)
|+.||.|++|+|+..|++.+++.+|..+++++++.+++.+|.|++|.|+|++|.+.+...|
T Consensus 98 F~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~~ 158 (160)
T COG5126 98 FKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDSP 158 (160)
T ss_pred HHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999887654
No 3
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.78 E-value=2.5e-18 Score=161.35 Aligned_cols=131 Identities=22% Similarity=0.386 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------h----h
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKRK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------E----P 455 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------e----e 455 (581)
..+++++|+.+|.+++|+|+..||..+++.+| ++..++..++..+|.+ ++|.|++.||+.++... . +
T Consensus 7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~d-g~g~I~~~eF~~l~~~~~~~~~~~~~~~~ 85 (151)
T KOG0027|consen 7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLD-GDGTIDFEEFLDLMEKLGEEKTDEEASSE 85 (151)
T ss_pred HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCC-CCCeEcHHHHHHHHHhhhcccccccccHH
Confidence 45789999999999999999999999999998 4679999999999999 99999999999988855 2 3
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 456 TILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 456 ~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
.++.+|+.||.|++|+|+..||+.+|..+|...+.+++..+++..|.|+||.|+|.+|+.+|..
T Consensus 86 el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 86 ELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 8999999999999999999999999999999999999999999999999999999999998863
No 4
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.74 E-value=6.2e-18 Score=177.67 Aligned_cols=206 Identities=18% Similarity=0.297 Sum_probs=150.1
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCcchhhhccccccccccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHH
Q 008009 350 STVSLTELIELLPQLGRTSKDHPDKKKLFSVQDFFRYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFM 429 (581)
Q Consensus 350 skIS~~EL~e~LkqLg~~~~~~pd~~kL~s~~~~~~~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf 429 (581)
..++..++...+..+. +| ....+-.+.+|...|.|.||.++++||...+.. .+.++..+|
T Consensus 29 g~~d~~~l~k~~~~l~-----~~------------~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~---~E~~l~~~F 88 (463)
T KOG0036|consen 29 GQVDLDQLEKGLEKLD-----HP------------KPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN---KELELYRIF 88 (463)
T ss_pred CceeHHHHHHHHHhcC-----CC------------CCchHHHHHHHHhcccCcCCcccHHHHHHHHHH---hHHHHHHHH
Confidence 3566667776666665 11 233456678899999999999999999999987 677888999
Q ss_pred HhhcCCCCCCCcchHHHHhhhccc-----hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHH-----
Q 008009 430 RRTRSHLFSKSFGWKQFLSLMEQK-----EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRF----- 499 (581)
Q Consensus 430 ~~~D~d~gDG~IsfeEF~~~L~~~-----ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~----- 499 (581)
+.+|.+ .||.|+.+|...++... .++..+.|+..|++|++.|+.+|+++.+.... ++.+..++..
T Consensus 89 ~~iD~~-hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll~p----~s~i~di~~~W~h~~ 163 (463)
T KOG0036|consen 89 QSIDLE-HDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLLYP----ESDLEDIYDFWRHVL 163 (463)
T ss_pred hhhccc-cCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhcCC----hhHHHHHHHhhhhhe
Confidence 999999 89999999999888765 67788899999999999999999999876543 4445555332
Q ss_pred -hCCCCCCcccHHHHHHH----------HHh------------CCCCCC----------------c---------cchHH
Q 008009 500 -LNADTEESISYGHFRNF----------MVL------------LPSDRL----------------Q---------DDPRS 531 (581)
Q Consensus 500 -lD~d~DGkIs~eEF~~~----------lll------------~Ps~~l----------------~---------d~irs 531 (581)
+|...+..|. ++|... +.. .|-+++ . ..+++
T Consensus 164 ~idigE~~~iP-dg~s~~e~~~g~ww~~liAGGiAGavSRTcTAPlDRLKV~lqv~~~k~~~~~v~~~~k~l~~eggiks 242 (463)
T KOG0036|consen 164 LIDIGEDAVLP-DGDSKLENDSGRWWGFLIAGGIAGAVSRTCTAPLDRLKVFLQVQSPKANILPLLKAVKSLWREGGIKS 242 (463)
T ss_pred EEEccccccCC-cchHHHHhcccchhhhhccccccccccccccCchhhhheeeeccCCCCCcccHHHHHHHHHhccCcee
Confidence 4666666555 333221 110 022221 1 33344
Q ss_pred HHHhcCe-eecCCCCccccCc-----------------chhhhhhhchhhhhhhccccCccccccCCC
Q 008009 532 IWFEAAT-VVAVPPPVEIPAG-----------------SVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 532 ~W~e~~t-vidV~~~~~I~sg-----------------~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
+|++++. +++|+|++.|+.+ ..+.+++|||+|||++||++||||+||||+
T Consensus 243 f~rGNGiNViKvaPESaIKF~ayE~~Kr~i~~~~~e~ls~~~rl~AGglAGavAQ~~IYPmd~lKtRl 310 (463)
T KOG0036|consen 243 FFRGNGLNVIKVAPESAIKFGAYEQTKRIIGGCDDEDLSTFERLLAGGLAGAVAQTSIYPMDTLKTRL 310 (463)
T ss_pred eeccCceeeEEecchhhHhhhhHHHHHHHhccCchhhcchhhhhhccCchhHHHHhhcChHHHHHHHh
Confidence 4555444 6789999888644 236679999999999999999999999995
No 5
>PTZ00183 centrin; Provisional
Probab=99.71 E-value=2.4e-16 Score=145.96 Aligned_cols=134 Identities=22% Similarity=0.341 Sum_probs=122.7
Q ss_pred cHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------hhHHH
Q 008009 387 TEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------EPTIL 458 (581)
Q Consensus 387 te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------ee~Lr 458 (581)
...+++.+|..+|.+++|+|+..||..++..+| ++...+..++..+|.+ ++|.|+|.||..++... ...++
T Consensus 15 ~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~-~~g~i~~~eF~~~~~~~~~~~~~~~~l~ 93 (158)
T PTZ00183 15 QKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKD-GSGKIDFEEFLDIMTKKLGERDPREEIL 93 (158)
T ss_pred HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC-CCCcEeHHHHHHHHHHHhcCCCcHHHHH
Confidence 346788899999999999999999999999887 5678899999999999 89999999999876542 45788
Q ss_pred HHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCC
Q 008009 459 RAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLP 521 (581)
Q Consensus 459 ~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~P 521 (581)
.+|+.+|.+++|+|+.+||..++..+|..++++++..+|..+|.+++|.|+|++|..++...|
T Consensus 94 ~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~ 156 (158)
T PTZ00183 94 KAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKKTN 156 (158)
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999999999999999999998766
No 6
>PTZ00184 calmodulin; Provisional
Probab=99.68 E-value=7.5e-16 Score=140.59 Aligned_cols=130 Identities=24% Similarity=0.394 Sum_probs=118.5
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------hhHHHH
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKRK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------EPTILR 459 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------ee~Lr~ 459 (581)
.++++..|..+|.+++|.|+.+||..++..++ +..+.+..++..+|.+ ++|.|+|++|+.++... .+.+..
T Consensus 10 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~-~~g~i~~~ef~~~l~~~~~~~~~~~~~~~ 88 (149)
T PTZ00184 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD-GNGTIDFPEFLTLMARKMKDTDSEEEIKE 88 (149)
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcC-CCCcCcHHHHHHHHHHhccCCcHHHHHHH
Confidence 35678899999999999999999999999886 4567899999999999 89999999999977632 457889
Q ss_pred HHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 460 AYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 460 aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
+|..+|.+++|+|+.+||..++..+|..++.+++..++..+|.+++|.|+|.||+.++.
T Consensus 89 ~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 89 AFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999998875
No 7
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.62 E-value=5.8e-15 Score=138.50 Aligned_cols=131 Identities=20% Similarity=0.308 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCC--CHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------hhHHHH
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKL--PRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------EPTILR 459 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl--~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------ee~Lr~ 459 (581)
..+++..|..||.+++|+|+++||..+++.+|+ ..+++..++..+|.+ +.|.|+|++|+..|... .+.++.
T Consensus 32 ~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~-~~g~i~fe~f~~~mt~k~~e~dt~eEi~~ 110 (172)
T KOG0028|consen 32 KQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKE-GSGKITFEDFRRVMTVKLGERDTKEEIKK 110 (172)
T ss_pred HhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhc-cCceechHHHHHHHHHHHhccCcHHHHHH
Confidence 367899999999999999999999999999995 568899999999999 89999999999987755 678999
Q ss_pred HHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 460 AYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 460 aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
+|+.+|.|++|.|+..+|+.+.+.+|.+++++++.+|+..+|.++||.|+-+||..+|..
T Consensus 111 afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 111 AFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999988764
No 8
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.52 E-value=1.6e-13 Score=134.86 Aligned_cols=133 Identities=20% Similarity=0.279 Sum_probs=122.7
Q ss_pred cHHHHHHHHHHHcCCCCCcccHHHHHHHHHHc---CCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccchhHHHHHHHH
Q 008009 387 TEAEGRRFFEELDRDGDGQVNLEDLEIAMRKR---KLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQKEPTILRAYTS 463 (581)
Q Consensus 387 te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~l---gl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ee~Lr~aFk~ 463 (581)
...++...|+..|+|+.|+|+.+|+.++|... +++.+.++.|+..||.+ .+|+|++.||..++... ..++.+|+.
T Consensus 55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~-~~G~i~f~EF~~Lw~~i-~~Wr~vF~~ 132 (221)
T KOG0037|consen 55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRD-NSGTIGFKEFKALWKYI-NQWRNVFRT 132 (221)
T ss_pred ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCC-CCCccCHHHHHHHHHHH-HHHHHHHHh
Confidence 34577789999999999999999999999855 37889999999999999 89999999999987765 889999999
Q ss_pred HcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCC
Q 008009 464 LCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLP 521 (581)
Q Consensus 464 ~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~P 521 (581)
||+|++|.|+..||+++|..+|..++++-.+.+++.+|....|.|.|++|++.+..++
T Consensus 133 ~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~ 190 (221)
T KOG0037|consen 133 YDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQ 190 (221)
T ss_pred cccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988899999999999988665
No 9
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.48 E-value=6.8e-13 Score=123.96 Aligned_cols=126 Identities=21% Similarity=0.303 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------hhHHHH
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKRK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------EPTILR 459 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------ee~Lr~ 459 (581)
-.|++++|..+|+|+||.|+.++|+..+.++| .+.+++..++.. ..|.|+|.-|+.++..+ ++.+..
T Consensus 31 IqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E-----a~gPINft~FLTmfGekL~gtdpe~~I~~ 105 (171)
T KOG0031|consen 31 IQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKE-----APGPINFTVFLTMFGEKLNGTDPEEVILN 105 (171)
T ss_pred HHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh-----CCCCeeHHHHHHHHHHHhcCCCHHHHHHH
Confidence 45889999999999999999999999999998 577899988876 57899999999988766 888999
Q ss_pred HHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 460 AYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 460 aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
+|+.||.+++|.|..+.|+.+|...|..+++++++.|++.+-.|..|.|+|..|...+.
T Consensus 106 AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 106 AFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998886
No 10
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.46 E-value=8.6e-13 Score=128.83 Aligned_cols=131 Identities=19% Similarity=0.283 Sum_probs=109.2
Q ss_pred HHHHHHHHHHcCC-CCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCC-cchHHHHhhhccc------hhHHHHH
Q 008009 389 AEGRRFFEELDRD-GDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKS-FGWKQFLSLMEQK------EPTILRA 460 (581)
Q Consensus 389 ~eLr~lF~~~D~d-~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~-IsfeEF~~~L~~~------ee~Lr~a 460 (581)
..+...|..+|.+ ++|+|+.+||..+... ..++ ...+++..++.+ ++|. |+|.+|+..+... +++++-+
T Consensus 33 ~~L~~rF~kl~~~~~~g~lt~eef~~i~~~-~~Np-~~~rI~~~f~~~-~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~fa 109 (187)
T KOG0034|consen 33 ERLYERFKKLDRNNGDGYLTKEEFLSIPEL-ALNP-LADRIIDRFDTD-GNGDPVDFEEFVRLLSVFSPKASKREKLRFA 109 (187)
T ss_pred HHHHHHHHHhccccccCccCHHHHHHHHHH-hcCc-HHHHHHHHHhcc-CCCCccCHHHHHHHHhhhcCCccHHHHHHHH
Confidence 3456678999999 9999999999999832 3332 567899999998 7777 9999999988765 5689999
Q ss_pred HHHHcCCCCCcccHHHHHHHHHHc-CCCCC--HHH----HHHHHHHhCCCCCCcccHHHHHHHHHhCCC
Q 008009 461 YTSLCLSKSGTLQKSEILASLKNA-GLPAN--EEN----AVAMMRFLNADTEESISYGHFRNFMVLLPS 522 (581)
Q Consensus 461 Fk~~D~DgdG~Is~eEf~~vLk~l-G~~lS--eee----l~~Lf~~lD~d~DGkIs~eEF~~~lll~Ps 522 (581)
|+.||.+++|+|+.+|+.+++..+ +...+ ++. ++.+|..+|.|+||+|+|+||.+++...|.
T Consensus 110 F~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~ 178 (187)
T KOG0034|consen 110 FRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPD 178 (187)
T ss_pred HHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCcc
Confidence 999999999999999999999876 33344 454 456788899999999999999999998885
No 11
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.45 E-value=7.1e-13 Score=129.76 Aligned_cols=138 Identities=15% Similarity=0.270 Sum_probs=119.3
Q ss_pred ccccHHHHHHHHHHHcCCC-CCcccHHHHHHHHHHcC---CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc-----h
Q 008009 384 FRYTEAEGRRFFEELDRDG-DGQVNLEDLEIAMRKRK---LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK-----E 454 (581)
Q Consensus 384 ~~~te~eLr~lF~~~D~d~-dG~Is~eEf~~~L~~lg---l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~-----e 454 (581)
..+++.+++.+|+.|-.+. +|.++.++|+.++..+. -+..+++.+|+.+|.+ +||.|+|.||+..++.. +
T Consensus 21 t~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~-~dg~i~F~Efi~als~~~rGt~e 99 (193)
T KOG0044|consen 21 TKFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKN-KDGTIDFLEFICALSLTSRGTLE 99 (193)
T ss_pred cCCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhccc-CCCCcCHHHHHHHHHHHcCCcHH
Confidence 5678899999999998866 89999999999999985 3557889999999999 89999999999988754 7
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHc----CC-------CCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCCC
Q 008009 455 PTILRAYTSLCLSKSGTLQKSEILASLKNA----GL-------PANEENAVAMMRFLNADTEESISYGHFRNFMVLLPS 522 (581)
Q Consensus 455 e~Lr~aFk~~D~DgdG~Is~eEf~~vLk~l----G~-------~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~Ps 522 (581)
+.++.+|+.||.||+|+|+.+|+..+++.+ +. ...++.+..+|+.+|.|+||.|+++||.......|.
T Consensus 100 ekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~ 178 (193)
T KOG0044|consen 100 EKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPS 178 (193)
T ss_pred HHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHH
Confidence 889999999999999999999999988764 21 113455789999999999999999999998886653
No 12
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=99.34 E-value=6.7e-13 Score=142.03 Aligned_cols=125 Identities=14% Similarity=0.214 Sum_probs=91.7
Q ss_pred cHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCC----CH----HHHHHHHHhhcCCCCCCCcchHHHHhhhccc-hhHH
Q 008009 387 TEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKL----PR----RYAREFMRRTRSHLFSKSFGWKQFLSLMEQK-EPTI 457 (581)
Q Consensus 387 te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl----~~----eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~-ee~L 457 (581)
.+.....+|+.||+.++|.++.+++++++.+..+ +. +.++..|... ....++|.||.+++... ++..
T Consensus 106 pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~----~~r~~ny~~f~Q~lh~~~~E~~ 181 (694)
T KOG0751|consen 106 PDALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDI----RKRHLNYAEFTQFLHEFQLEHA 181 (694)
T ss_pred chHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhH----HHHhccHHHHHHHHHHHHHHHH
Confidence 3566788999999999999999999999998753 22 3444433332 45579999999998876 6778
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHh-CCCCCCcccHHHHHH
Q 008009 458 LRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFL-NADTEESISYGHFRN 515 (581)
Q Consensus 458 r~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~l-D~d~DGkIs~eEF~~ 515 (581)
.++|+..|..++|.|+.-+|+.++...-.++....+++.+... ..+...++++..|..
T Consensus 182 ~qafr~~d~~~ng~is~Ldfq~imvt~~~h~lt~~v~~nlv~vagg~~~H~vSf~yf~a 240 (694)
T KOG0751|consen 182 EQAFREKDKAKNGFISVLDFQDIMVTIRIHLLTPFVEENLVSVAGGNDSHQVSFSYFNA 240 (694)
T ss_pred HHHHHHhcccCCCeeeeechHhhhhhhhhhcCCHHHhhhhhhhcCCCCccccchHHHHH
Confidence 9999999999999999999999988775555545555444333 333444566555543
No 13
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.30 E-value=2.2e-11 Score=112.24 Aligned_cols=129 Identities=18% Similarity=0.270 Sum_probs=111.5
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHcCC--CHHHHHHHHHhhcCCC-CCCCcchHHHHhhhccc--------hhHH
Q 008009 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKRKL--PRRYAREFMRRTRSHL-FSKSFGWKQFLSLMEQK--------EPTI 457 (581)
Q Consensus 389 ~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl--~~eel~~Lf~~~D~d~-gDG~IsfeEF~~~L~~~--------ee~L 457 (581)
.+++++|..||..+||.|+..+...+|+.+|. +..++......++.+. +-.+|+|++|+-++... -+..
T Consensus 11 ~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~t~edf 90 (152)
T KOG0030|consen 11 EEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQGTYEDF 90 (152)
T ss_pred HHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccCcHHHH
Confidence 68999999999999999999999999999985 4567777777776541 23789999999988754 4556
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 458 LRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 458 r~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
-+-.+.||++++|+|...||+.+|..+|..+++++++.++.... |.+|.|+|+.|++.+.
T Consensus 91 vegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~e-D~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 91 VEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQE-DSNGCINYEAFVKHIM 150 (152)
T ss_pred HHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHcccc-ccCCcCcHHHHHHHHh
Confidence 67789999999999999999999999999999999999998764 7789999999998765
No 14
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.09 E-value=9.4e-10 Score=103.33 Aligned_cols=115 Identities=20% Similarity=0.247 Sum_probs=103.5
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCcchhhhccccccccccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCC-------CH
Q 008009 350 STVSLTELIELLPQLGRTSKDHPDKKKLFSVQDFFRYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKL-------PR 422 (581)
Q Consensus 350 skIS~~EL~e~LkqLg~~~~~~pd~~kL~s~~~~~~~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl-------~~ 422 (581)
..|+..||..+++.+| ...++.++..+++.+|.+++|.|+..||..++..... ..
T Consensus 23 G~i~~~el~~~lr~lg------------------~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~ 84 (151)
T KOG0027|consen 23 GKISVEELGAVLRSLG------------------QNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASS 84 (151)
T ss_pred CcccHHHHHHHHHHcC------------------CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccH
Confidence 5789999999999999 5578999999999999999999999999999998742 24
Q ss_pred HHHHHHHHhhcCCCCCCCcchHHHHhhhccc-----hhHHHHHHHHHcCCCCCcccHHHHHHHHHH
Q 008009 423 RYAREFMRRTRSHLFSKSFGWKQFLSLMEQK-----EPTILRAYTSLCLSKSGTLQKSEILASLKN 483 (581)
Q Consensus 423 eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~-----ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~ 483 (581)
+++.+.|+.+|.+ ++|.|++.|+..+|... .+.+..+++..|.|++|.|+.+||.+++..
T Consensus 85 ~el~eaF~~fD~d-~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 85 EELKEAFRVFDKD-GDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHHccC-CCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 5899999999999 99999999999999876 667889999999999999999999988753
No 15
>PTZ00183 centrin; Provisional
Probab=99.04 E-value=3e-09 Score=98.46 Aligned_cols=115 Identities=18% Similarity=0.313 Sum_probs=99.2
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCcchhhhccccccccccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHc---CCCHHHHH
Q 008009 350 STVSLTELIELLPQLGRTSKDHPDKKKLFSVQDFFRYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKR---KLPRRYAR 426 (581)
Q Consensus 350 skIS~~EL~e~LkqLg~~~~~~pd~~kL~s~~~~~~~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~l---gl~~eel~ 426 (581)
..|+..||..+++.++ .......+..+|..+|.+++|.|++.||..++... ..+.+.++
T Consensus 32 G~i~~~e~~~~l~~~g------------------~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~ 93 (158)
T PTZ00183 32 GTIDPKELKVAMRSLG------------------FEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEIL 93 (158)
T ss_pred CcccHHHHHHHHHHhC------------------CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHH
Confidence 3589999999998887 44556789999999999999999999999987653 24567889
Q ss_pred HHHHhhcCCCCCCCcchHHHHhhhccc-----hhHHHHHHHHHcCCCCCcccHHHHHHHHHH
Q 008009 427 EFMRRTRSHLFSKSFGWKQFLSLMEQK-----EPTILRAYTSLCLSKSGTLQKSEILASLKN 483 (581)
Q Consensus 427 ~Lf~~~D~d~gDG~IsfeEF~~~L~~~-----ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~ 483 (581)
.+|..+|.+ ++|.|++.||..++... ...+..+|..+|.+++|.|+.+||..++..
T Consensus 94 ~~F~~~D~~-~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 94 KAFRLFDDD-KTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHHHHhCCC-CCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 999999999 89999999999987642 567889999999999999999999998864
No 16
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.04 E-value=2e-09 Score=114.66 Aligned_cols=130 Identities=14% Similarity=0.253 Sum_probs=106.7
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHc---CCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------------
Q 008009 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR---KLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------------ 453 (581)
Q Consensus 389 ~eLr~lF~~~D~d~dG~Is~eEf~~~L~~l---gl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------------ 453 (581)
.++..-|+.+|..++|+|+...+..++..+ |+|...+.. +....+ .||.+.|.+....+...
T Consensus 464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~--kla~~s-~d~~v~Y~~~~~~l~~e~~~~ea~~slve 540 (631)
T KOG0377|consen 464 SDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRP--KLANGS-DDGKVEYKSTLDNLDTEVILEEAGSSLVE 540 (631)
T ss_pred hHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhh--hccCCC-cCcceehHhHHHHhhhhhHHHHHHhHHHH
Confidence 578899999999999999999999998876 566654443 223334 57888888776655422
Q ss_pred -----hhHHHHHHHHHcCCCCCcccHHHHHHHHHHc----CCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCC
Q 008009 454 -----EPTILRAYTSLCLSKSGTLQKSEILASLKNA----GLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLP 521 (581)
Q Consensus 454 -----ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~l----G~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~P 521 (581)
...+..+|+.+|.|++|.|+.+||+++++.+ ..+++++++.++.+.+|.|+||.|+++||+.++.+.-
T Consensus 541 tLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlvd 617 (631)
T KOG0377|consen 541 TLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLVD 617 (631)
T ss_pred HHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhhc
Confidence 4457889999999999999999999999866 4678999999999999999999999999999988653
No 17
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.00 E-value=2.2e-08 Score=98.92 Aligned_cols=142 Identities=13% Similarity=0.144 Sum_probs=109.0
Q ss_pred hcCCCCHHHHHHHHHhcCCCCCCCcchhhhccccccccccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHH
Q 008009 348 TLSTVSLTELIELLPQLGRTSKDHPDKKKLFSVQDFFRYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYARE 427 (581)
Q Consensus 348 ~LskIS~~EL~e~LkqLg~~~~~~pd~~kL~s~~~~~~~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~ 427 (581)
.+..|+.+||..+|.... ...+..+..+.+...||.+++|+|..+||..+.+. ....+.
T Consensus 70 ~sg~i~~~eLq~aLsn~~-----------------~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~----i~~Wr~ 128 (221)
T KOG0037|consen 70 RSGRILAKELQQALSNGT-----------------WSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKY----INQWRN 128 (221)
T ss_pred ccccccHHHHHHHhhcCC-----------------CCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH----HHHHHH
Confidence 345789999999887664 13345567777788888888899999998887765 456678
Q ss_pred HHHhhcCCCCCCCcchHHHHhhhccc-----hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCC
Q 008009 428 FMRRTRSHLFSKSFGWKQFLSLMEQK-----EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNA 502 (581)
Q Consensus 428 Lf~~~D~d~gDG~IsfeEF~~~L~~~-----ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~ 502 (581)
+|+.+|.| ++|+|+..|+...+... ..-...+++.||..++|.|..++|.+.+..+ ..+.+.|+..|.
T Consensus 129 vF~~~D~D-~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L------~~lt~~Fr~~D~ 201 (221)
T KOG0037|consen 129 VFRTYDRD-RSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL------QRLTEAFRRRDT 201 (221)
T ss_pred HHHhcccC-CCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHH------HHHHHHHHHhcc
Confidence 88889988 88999999988877765 4556667888887778889998888887665 446778888888
Q ss_pred CCCCc--ccHHHHHHHH
Q 008009 503 DTEES--ISYGHFRNFM 517 (581)
Q Consensus 503 d~DGk--Is~eEF~~~l 517 (581)
+.+|. |+|++|+.+.
T Consensus 202 ~q~G~i~~~y~dfl~~t 218 (221)
T KOG0037|consen 202 AQQGSITISYDDFLQMT 218 (221)
T ss_pred ccceeEEEeHHHHHHHh
Confidence 87775 5688887654
No 18
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.96 E-value=2e-09 Score=86.57 Aligned_cols=62 Identities=26% Similarity=0.442 Sum_probs=55.0
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHH----HHHHHHHhCCCCCCcccHHHHHHHH
Q 008009 456 TILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEEN----AVAMMRFLNADTEESISYGHFRNFM 517 (581)
Q Consensus 456 ~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeee----l~~Lf~~lD~d~DGkIs~eEF~~~l 517 (581)
+++++|+.+|.|++|+|+.+||..++..++...++++ +..+++.+|.|+||.|+|+||.++|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4788999999999999999999999999987665555 4555999999999999999999876
No 19
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.95 E-value=8e-09 Score=98.54 Aligned_cols=122 Identities=18% Similarity=0.297 Sum_probs=106.5
Q ss_pred hHHHhhhc--------CCCCHHHHHHHHHhcCCCCCCCcchhhhccccccccccHHHHHHHHHHHcCCCCCcccHHHHHH
Q 008009 342 VERLRSTL--------STVSLTELIELLPQLGRTSKDHPDKKKLFSVQDFFRYTEAEGRRFFEELDRDGDGQVNLEDLEI 413 (581)
Q Consensus 342 ve~Lks~L--------skIS~~EL~e~LkqLg~~~~~~pd~~kL~s~~~~~~~te~eLr~lF~~~D~d~dG~Is~eEf~~ 413 (581)
+.+++... ..|+..||..+++.+| ...++.++.++|..+|. +.|.|++.+|..
T Consensus 19 i~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg------------------~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~ 79 (160)
T COG5126 19 IQELKEAFQLFDRDSDGLIDRNELGKILRSLG------------------FNPSEAEINKLFEEIDA-GNETVDFPEFLT 79 (160)
T ss_pred HHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcC------------------CCCcHHHHHHHHHhccC-CCCccCHHHHHH
Confidence 45555555 2578888999998888 77889999999999999 899999999999
Q ss_pred HHHHc---CCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc-----hhHHHHHHHHHcCCCCCcccHHHHHHHHHH
Q 008009 414 AMRKR---KLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK-----EPTILRAYTSLCLSKSGTLQKSEILASLKN 483 (581)
Q Consensus 414 ~L~~l---gl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~-----ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~ 483 (581)
+|... +-+.+++...|+.||.+ ++|+|+..|+...+... .+.+..+++.+|.|++|+|+.+||.+.+..
T Consensus 80 ~ms~~~~~~~~~Eel~~aF~~fD~d-~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 80 VMSVKLKRGDKEEELREAFKLFDKD-HDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred HHHHHhccCCcHHHHHHHHHHhCCC-CCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 99775 25679999999999999 89999999999998866 678999999999999999999999997753
No 20
>PTZ00184 calmodulin; Provisional
Probab=98.93 E-value=1.1e-08 Score=93.19 Aligned_cols=114 Identities=17% Similarity=0.239 Sum_probs=96.4
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCcchhhhccccccccccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHc---CCCHHHHH
Q 008009 350 STVSLTELIELLPQLGRTSKDHPDKKKLFSVQDFFRYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKR---KLPRRYAR 426 (581)
Q Consensus 350 skIS~~EL~e~LkqLg~~~~~~pd~~kL~s~~~~~~~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~l---gl~~eel~ 426 (581)
.+|+..||..++..++ ......+++.+|..+|.+++|.|+++||..++... ......+.
T Consensus 26 G~i~~~e~~~~l~~~~------------------~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~ 87 (149)
T PTZ00184 26 GTITTKELGTVMRSLG------------------QNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIK 87 (149)
T ss_pred CcCCHHHHHHHHHHhC------------------CCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHH
Confidence 4688899999888876 33446788999999999999999999999988754 23446788
Q ss_pred HHHHhhcCCCCCCCcchHHHHhhhccc-----hhHHHHHHHHHcCCCCCcccHHHHHHHHH
Q 008009 427 EFMRRTRSHLFSKSFGWKQFLSLMEQK-----EPTILRAYTSLCLSKSGTLQKSEILASLK 482 (581)
Q Consensus 427 ~Lf~~~D~d~gDG~IsfeEF~~~L~~~-----ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk 482 (581)
.+|..+|.+ ++|.|+.+||..++... .+.+..+|..+|.+++|.|+.+||..++.
T Consensus 88 ~~F~~~D~~-~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 88 EAFKVFDRD-GNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHhhCCC-CCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 999999999 89999999999877543 56788899999999999999999988763
No 21
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.87 E-value=5e-09 Score=90.86 Aligned_cols=65 Identities=15% Similarity=0.247 Sum_probs=60.7
Q ss_pred hHHHHHHHHHcC-CCCCcccHHHHHHHHHH-cCCCCCH-HHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 455 PTILRAYTSLCL-SKSGTLQKSEILASLKN-AGLPANE-ENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 455 e~Lr~aFk~~D~-DgdG~Is~eEf~~vLk~-lG~~lSe-eel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
..++.+|+.||. +++|+|+..||+.+|.. +|..+++ ++++.+|+.+|.|+||.|+|+||+.+|..
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~ 75 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 568899999999 99999999999999999 8877888 99999999999999999999999988874
No 22
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.85 E-value=6e-09 Score=107.92 Aligned_cols=124 Identities=15% Similarity=0.208 Sum_probs=102.3
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHcCC---CHHHHHHHHHhhcCCCCCCCcchHHHHhhhccch----------hHHH
Q 008009 392 RRFFEELDRDGDGQVNLEDLEIAMRKRKL---PRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQKE----------PTIL 458 (581)
Q Consensus 392 r~lF~~~D~d~dG~Is~eEf~~~L~~lgl---~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~e----------e~Lr 458 (581)
++-|+..|.|+||.++.+||.++|.--.. ..--++.-+.-+|.| +||.|+++||+.-|.... ..-.
T Consensus 166 e~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn-~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere 244 (325)
T KOG4223|consen 166 EERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKN-GDGKISLEEFIGDLYSHEGNEEEPEWVLTERE 244 (325)
T ss_pred HHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccC-CCCceeHHHHHhHHhhccCCCCCcccccccHH
Confidence 35689999999999999999999853221 122356677788999 999999999999776551 1234
Q ss_pred HHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHH
Q 008009 459 RAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNF 516 (581)
Q Consensus 459 ~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~ 516 (581)
+.|..+|+|++|+++.+|++..+.--+......++.+++...|.|+||++|++|.+.-
T Consensus 245 ~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~ 302 (325)
T KOG4223|consen 245 QFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILEH 302 (325)
T ss_pred HHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhhC
Confidence 6788999999999999999999887788888899999999999999999999997643
No 23
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=98.83 E-value=3.8e-10 Score=101.09 Aligned_cols=91 Identities=18% Similarity=0.253 Sum_probs=24.0
Q ss_pred cchhhhhhhhhhhcccccccccccccCcceeeecCCCCCCccCCCCCCCCCCCCCCCCCcccCCCCCccccccccc----
Q 008009 260 PSQFDHLKALISIWEGRKAEVDGFLGNLKFARVGGMPSSIVGVTNSVNEEGENGVSSDSREETGGNSAQKVASGIL---- 335 (581)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~~farv~~~~ss~~~~s~s~~~~s~~~~~~~~~~et~~~~~q~~~~~~~---- 335 (581)
..||||||++|||+.++|++|.+||+.++..|+-.|+.+ +.++..+.+++.++.+..+.++..+++...+.+.+
T Consensus 6 DeQFdrLW~e~Pvn~~GrLkY~eFL~kfs~e~~~tP~a~--~ds~~aq~gss~Pe~~~~~~sa~s~p~~~~r~g~~~~sh 83 (118)
T PF08976_consen 6 DEQFDRLWNEMPVNAKGRLKYQEFLSKFSSEKAATPPAT--GDSAKAQRGSSVPEVSEGTRSALSSPTCDSRAGLKSRSH 83 (118)
T ss_dssp HHHHHHHHTTS-B-TTS-EEHHHHHHHT----------------------------------------------------
T ss_pred HHHhhhhhhhCcCCccCCEeHHHHHHHcccccccCCCCC--CCcccccCCCCCCccccCCCCCCCCCccccccccccCCC
Confidence 469999999999999999999999999999999775544 66666777777777665444444444433333221
Q ss_pred ------------cCCCcchHHHhhhcCCC
Q 008009 336 ------------SIPLSNVERLRSTLSTV 352 (581)
Q Consensus 336 ------------s~~L~nve~Lks~LskI 352 (581)
..||+|+|.+++.|.+.
T Consensus 84 p~Tp~s~~~~~~~pPLqNcE~IEskLRK~ 112 (118)
T PF08976_consen 84 PCTPASTGSRPGTPPLQNCEPIESKLRKK 112 (118)
T ss_dssp -----------------------------
T ss_pred CCCccccccCCCCCCCcccHHHHHHHHHH
Confidence 36899999999888654
No 24
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.82 E-value=2.4e-08 Score=103.47 Aligned_cols=134 Identities=13% Similarity=0.128 Sum_probs=109.0
Q ss_pred cHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc-----------
Q 008009 387 TEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK----------- 453 (581)
Q Consensus 387 te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~----------- 453 (581)
+...+..++..+|.+++|+|+..|+...+...- .-..++..-+..+|.+ .||.|+|+||...+..+
T Consensus 75 ~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~-~Dg~i~~eey~~~~~~~~~~~~~~~d~e 153 (325)
T KOG4223|consen 75 SQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKN-KDGFITWEEYLPQTYGRVDLPDEFPDEE 153 (325)
T ss_pred hHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-ccceeeHHHhhhhhhhcccCccccccch
Confidence 567889999999999999999999999886631 2235667778889999 89999999999866531
Q ss_pred --------hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcC-CCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCC
Q 008009 454 --------EPTILRAYTSLCLSKSGTLQKSEILASLKNAG-LPANEENAVAMMRFLNADTEESISYGHFRNFMVLLP 521 (581)
Q Consensus 454 --------ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG-~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~P 521 (581)
...-++-|+.-|.|++|.++.+||..+|.-.. ..+.+-.+..-+..+|+|+||+|+++||+.-|...+
T Consensus 154 ~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~ 230 (325)
T KOG4223|consen 154 DNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHE 230 (325)
T ss_pred hcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhcc
Confidence 22345679999999999999999999986543 334455678889999999999999999998888664
No 25
>PLN02964 phosphatidylserine decarboxylase
Probab=98.74 E-value=4.9e-08 Score=110.86 Aligned_cols=109 Identities=15% Similarity=0.164 Sum_probs=89.2
Q ss_pred ccccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCC---CHHH---HHHHHHhhcCCCCCCCcchHHHHhhhccc----
Q 008009 384 FRYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKL---PRRY---AREFMRRTRSHLFSKSFGWKQFLSLMEQK---- 453 (581)
Q Consensus 384 ~~~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl---~~ee---l~~Lf~~~D~d~gDG~IsfeEF~~~L~~~---- 453 (581)
.....++++++|..+|.|++|.+ +..+++.+|. +..+ ++.+|..+|.+ ++|.|+|+||+.+|...
T Consensus 138 ~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~D-gdG~IdfdEFl~lL~~lg~~~ 212 (644)
T PLN02964 138 VTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYD-EDGQLSFSEFSDLIKAFGNLV 212 (644)
T ss_pred cHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCC-CCCeEcHHHHHHHHHHhccCC
Confidence 33345688899999999999997 8888888883 3333 78999999999 89999999999988643
Q ss_pred -hhHHHHHHHHHcCCCCCcccHHHHHHHHHH-------------cCCCCCH-HHHHHHH
Q 008009 454 -EPTILRAYTSLCLSKSGTLQKSEILASLKN-------------AGLPANE-ENAVAMM 497 (581)
Q Consensus 454 -ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~-------------lG~~lSe-eel~~Lf 497 (581)
++.++.+|+.+|.|++|+|+.+||..+|.. ++..++. +++..|+
T Consensus 213 seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~~~~~~~~~~cp~cg~~l~~~~~~~~ii 271 (644)
T PLN02964 213 AANKKEELFKAADLNGDGVVTIDELAALLALQQEQEPIINNCPVCGEALGVSDKLNAMI 271 (644)
T ss_pred CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcccCcchhhhchhhcCcccchhhHHHHH
Confidence 667999999999999999999999999988 5555555 4555555
No 26
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.73 E-value=4.1e-08 Score=84.90 Aligned_cols=64 Identities=17% Similarity=0.282 Sum_probs=59.8
Q ss_pred hHHHHHHHHHc-CCCCC-cccHHHHHHHHHH-----cCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 455 PTILRAYTSLC-LSKSG-TLQKSEILASLKN-----AGLPANEENAVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 455 e~Lr~aFk~~D-~DgdG-~Is~eEf~~vLk~-----lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
..++.+|+.|| .|++| +|+.+||+.+|+. +|...++++++.+++.+|.|++|+|+|+||+.++.
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~ 78 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 56889999998 79999 5999999999999 89889999999999999999999999999998876
No 27
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=98.70 E-value=1.7e-07 Score=88.68 Aligned_cols=115 Identities=14% Similarity=0.293 Sum_probs=103.9
Q ss_pred CCCCHHHHHHHHHhcCCCCCCCcchhhhccccccccccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHc-C--CCHHHHH
Q 008009 350 STVSLTELIELLPQLGRTSKDHPDKKKLFSVQDFFRYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKR-K--LPRRYAR 426 (581)
Q Consensus 350 skIS~~EL~e~LkqLg~~~~~~pd~~kL~s~~~~~~~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~l-g--l~~eel~ 426 (581)
.+|+.+||..+++.+| +....+++..+...+|+++.|.|++++|...+... + -+.+++.
T Consensus 48 g~iD~~EL~vAmralG------------------FE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~ 109 (172)
T KOG0028|consen 48 GKIDVEELKVAMRALG------------------FEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIK 109 (172)
T ss_pred CcccHHHHHHHHHHcC------------------CCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHH
Confidence 4799999999999999 77788899999999999999999999999997654 2 4889999
Q ss_pred HHHHhhcCCCCCCCcchHHHHhhhccc-----hhHHHHHHHHHcCCCCCcccHHHHHHHHHH
Q 008009 427 EFMRRTRSHLFSKSFGWKQFLSLMEQK-----EPTILRAYTSLCLSKSGTLQKSEILASLKN 483 (581)
Q Consensus 427 ~Lf~~~D~d~gDG~IsfeEF~~~L~~~-----ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~ 483 (581)
.+|+.+|.+ .+|.|++.+|+..+... .+.+..+...+|.|++|-|+.+||..+++.
T Consensus 110 ~afrl~D~D-~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 110 KAFRLFDDD-KTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred HHHHccccc-CCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 999999999 89999999999988877 458899999999999999999999988764
No 28
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.63 E-value=1e-07 Score=76.59 Aligned_cols=60 Identities=22% Similarity=0.429 Sum_probs=50.7
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHcCC--CH----HHHHHHHHhhcCCCCCCCcchHHHHhhh
Q 008009 390 EGRRFFEELDRDGDGQVNLEDLEIAMRKRKL--PR----RYAREFMRRTRSHLFSKSFGWKQFLSLM 450 (581)
Q Consensus 390 eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl--~~----eel~~Lf~~~D~d~gDG~IsfeEF~~~L 450 (581)
.++++|+.+|.|++|+|+.+||..++..++. +. +.++.+|+.+|.+ +||.|+|+||..+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d-~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTD-GDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTT-SSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCC-CcCCCcHHHHhccC
Confidence 4789999999999999999999999999873 23 4556668889998 89999999988764
No 29
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.59 E-value=1.6e-07 Score=81.62 Aligned_cols=64 Identities=9% Similarity=0.238 Sum_probs=58.3
Q ss_pred hHHHHHHHHHcC-CC-CCcccHHHHHHHHHH-----cCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 455 PTILRAYTSLCL-SK-SGTLQKSEILASLKN-----AGLPANEENAVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 455 e~Lr~aFk~~D~-Dg-dG~Is~eEf~~vLk~-----lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
..++.+|..||. |+ +|+|+.+||+.+|+. +|...+++++..+++.+|.+++|.|+|+||+.++.
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~ 78 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 568899999997 97 799999999999986 46788999999999999999999999999998876
No 30
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.58 E-value=2.1e-07 Score=80.45 Aligned_cols=66 Identities=12% Similarity=0.240 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHc-CCCCCc-ccHHHHHHHHHH-cC----CCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 454 EPTILRAYTSLC-LSKSGT-LQKSEILASLKN-AG----LPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 454 ee~Lr~aFk~~D-~DgdG~-Is~eEf~~vLk~-lG----~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
.+.++++|+.|| .+++|+ |+.+||+.+|+. +| ...++++++.+++.+|.|++|.|+|+||+.++..
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~ 80 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 467899999997 999995 999999999985 44 3568899999999999999999999999988763
No 31
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=98.57 E-value=6.9e-08 Score=103.28 Aligned_cols=111 Identities=19% Similarity=0.270 Sum_probs=78.8
Q ss_pred CCCHHHHHHHHHhcCCCCCCCcchhhhccccccccccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHc------CC----
Q 008009 351 TVSLTELIELLPQLGRTSKDHPDKKKLFSVQDFFRYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKR------KL---- 420 (581)
Q Consensus 351 kIS~~EL~e~LkqLg~~~~~~pd~~kL~s~~~~~~~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~l------gl---- 420 (581)
-||+.|++=++.-+. .++..++.+|+.||.|+||.|+.+||..+..-. +.
T Consensus 215 LIsfSdYiFLlTlLS--------------------~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd 274 (489)
T KOG2643|consen 215 LISFSDYIFLLTLLS--------------------IPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRD 274 (489)
T ss_pred eeeHHHHHHHHHHHc--------------------cCcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceeccc
Confidence 367777666655554 234456678999999999999999999887433 11
Q ss_pred --C------HHHHHHHHHh-hcCCCCCCCcchHHHHhhhccchhHH-HHHHHHHcCCCCCcccHHHHHHHHH
Q 008009 421 --P------RRYAREFMRR-TRSHLFSKSFGWKQFLSLMEQKEPTI-LRAYTSLCLSKSGTLQKSEILASLK 482 (581)
Q Consensus 421 --~------~eel~~Lf~~-~D~d~gDG~IsfeEF~~~L~~~ee~L-r~aFk~~D~DgdG~Is~eEf~~vLk 482 (581)
+ .+....+... |-.+ ++++++++||..++....+++ +--|..+|...+|.|+..+|..+|-
T Consensus 275 ~~tt~~s~~~~~nsaL~~yFFG~r-g~~kLs~deF~~F~e~Lq~Eil~lEF~~~~~~~~g~Ise~DFA~~lL 345 (489)
T KOG2643|consen 275 HFTTGNSFKVEVNSALLTYFFGKR-GNGKLSIDEFLKFQENLQEEILELEFERFDKGDSGAISEVDFAELLL 345 (489)
T ss_pred CccccceehhhhhhhHHHHhhccC-CCccccHHHHHHHHHHHHHHHHHHHHHHhCcccccccCHHHHHHHHH
Confidence 1 0111223333 3445 899999999999998874444 4459999998889999999987663
No 32
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=98.57 E-value=4.5e-07 Score=84.69 Aligned_cols=144 Identities=15% Similarity=0.185 Sum_probs=103.3
Q ss_pred hhccccccccccHHHHHHHHHHHcC--------CC------CCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCc
Q 008009 376 KLFSVQDFFRYTEAEGRRFFEELDR--------DG------DGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSF 441 (581)
Q Consensus 376 kL~s~~~~~~~te~eLr~lF~~~D~--------d~------dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~I 441 (581)
+|-..|+-+-++.+++.+++.+|-. +- .-++..+.+.. |..+.-+ ..-+++...+..+ |.|.+
T Consensus 12 qLd~YQDCTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~k-MPELken-pfk~ri~e~FSeD-G~Gnl 88 (189)
T KOG0038|consen 12 QLDEYQDCTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEK-MPELKEN-PFKRRICEVFSED-GRGNL 88 (189)
T ss_pred HHhhhcccccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhh-ChhhhcC-hHHHHHHHHhccC-CCCcc
Confidence 3444455566677788777665421 11 12344444332 2222111 1335677778888 99999
Q ss_pred chHHHHhhhccc------hhHHHHHHHHHcCCCCCcccHHHHHHHHHHc-CCCCCHHHH----HHHHHHhCCCCCCcccH
Q 008009 442 GWKQFLSLMEQK------EPTILRAYTSLCLSKSGTLQKSEILASLKNA-GLPANEENA----VAMMRFLNADTEESISY 510 (581)
Q Consensus 442 sfeEF~~~L~~~------ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~l-G~~lSeeel----~~Lf~~lD~d~DGkIs~ 510 (581)
+|++|+.+++.. .-++.-+|+.||-|++++|...++...+..+ ...++++++ +.++...|.|+||++++
T Consensus 89 sfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~ 168 (189)
T KOG0038|consen 89 SFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSF 168 (189)
T ss_pred cHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccH
Confidence 999999988754 4456778999999999999999999999877 345777774 56788899999999999
Q ss_pred HHHHHHHHhCCC
Q 008009 511 GHFRNFMVLLPS 522 (581)
Q Consensus 511 eEF~~~lll~Ps 522 (581)
.||.++++..|.
T Consensus 169 ~eFe~~i~raPD 180 (189)
T KOG0038|consen 169 AEFEHVILRAPD 180 (189)
T ss_pred HHHHHHHHhCcc
Confidence 999999998884
No 33
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.56 E-value=2.5e-07 Score=73.86 Aligned_cols=61 Identities=18% Similarity=0.233 Sum_probs=56.0
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhC
Q 008009 458 LRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLL 520 (581)
Q Consensus 458 r~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~ 520 (581)
+.+|..+|.+++|.|+.+|++.++..+|. +++++..+++.+|.+++|.|+|.||+.++...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 56899999999999999999999998875 88899999999999999999999999888643
No 34
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.56 E-value=2.5e-07 Score=80.59 Aligned_cols=65 Identities=14% Similarity=0.266 Sum_probs=56.3
Q ss_pred hHHHHHHHHHc-CCCCC-cccHHHHHHHHHHc-----CCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 455 PTILRAYTSLC-LSKSG-TLQKSEILASLKNA-----GLPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 455 e~Lr~aFk~~D-~DgdG-~Is~eEf~~vLk~l-----G~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
..+.++|..|| .|++| +|+.+||+.++... +...++.++..+++.+|.|+||.|+|+||+.++..
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~ 81 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAA 81 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 56788899999 78998 59999999999762 33447889999999999999999999999998863
No 35
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.55 E-value=2.8e-07 Score=79.73 Aligned_cols=65 Identities=12% Similarity=0.288 Sum_probs=58.4
Q ss_pred hHHHHHHHHHcC-CC-CCcccHHHHHHHHHH---cCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 455 PTILRAYTSLCL-SK-SGTLQKSEILASLKN---AGLPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 455 e~Lr~aFk~~D~-Dg-dG~Is~eEf~~vLk~---lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
..+-.+|..||. ++ +|+|+.+||+.+|.. +|..++++++.++++.+|.|++|+|+|+||+.++..
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 456678999998 67 899999999999973 688999999999999999999999999999988863
No 36
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=98.53 E-value=6.7e-07 Score=88.02 Aligned_cols=116 Identities=15% Similarity=0.203 Sum_probs=99.3
Q ss_pred CCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------hhHHHHHHHHHcCCCCCcccHHH
Q 008009 403 DGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------EPTILRAYTSLCLSKSGTLQKSE 476 (581)
Q Consensus 403 dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------ee~Lr~aFk~~D~DgdG~Is~eE 476 (581)
...+..+.+.++.+...++..+++.+++.|-.+...|.++-++|..++... ..-...+|+.+|.|++|.|+..|
T Consensus 6 ~~~~~~~~~e~l~~~t~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~E 85 (193)
T KOG0044|consen 6 NSKLQPESLEQLVQQTKFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLE 85 (193)
T ss_pred cccCCcHHHHHHHHhcCCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHH
Confidence 345666777777777789999999999999877569999999999977654 45678899999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 477 ILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 477 f~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
|...|....-...++.+.-.|+.||.|++|.|+++|+++++.
T Consensus 86 fi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~ 127 (193)
T KOG0044|consen 86 FICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQ 127 (193)
T ss_pred HHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHH
Confidence 999998876666778888899999999999999999988765
No 37
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.52 E-value=4e-07 Score=69.44 Aligned_cols=61 Identities=26% Similarity=0.406 Sum_probs=57.8
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHH
Q 008009 457 ILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFM 517 (581)
Q Consensus 457 Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~l 517 (581)
+..+|..+|.+++|.|+.+|+..++..++...+.+.+..++..+|.+++|.|++.+|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 5678999999999999999999999999999999999999999999999999999998765
No 38
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.51 E-value=2.5e-07 Score=80.28 Aligned_cols=64 Identities=11% Similarity=0.166 Sum_probs=57.8
Q ss_pred HHHHHHHHHHcC-CCCCcccHHHHHHHHHH-cC--CCH-HHHHHHHHhhcCCCCCCCcchHHHHhhhccc
Q 008009 389 AEGRRFFEELDR-DGDGQVNLEDLEIAMRK-RK--LPR-RYAREFMRRTRSHLFSKSFGWKQFLSLMEQK 453 (581)
Q Consensus 389 ~eLr~lF~~~D~-d~dG~Is~eEf~~~L~~-lg--l~~-eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ 453 (581)
..++.+|+.||+ +++|+|+..||+.+|.. ++ ++. ++++.+++.+|.| +||.|+|+||+.+|...
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d-~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVN-QDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCC-CCCCCcHHHHHHHHHHH
Confidence 467899999999 99999999999999999 76 666 8899999999999 99999999999987643
No 39
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.51 E-value=3e-07 Score=71.37 Aligned_cols=51 Identities=25% Similarity=0.466 Sum_probs=48.5
Q ss_pred CCCcccHHHHHHHHHHcCCC-CCHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 468 KSGTLQKSEILASLKNAGLP-ANEENAVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 468 gdG~Is~eEf~~vLk~lG~~-lSeeel~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
.+|.|+.+||+.+|..+|.. ++++++..+|..+|.+++|.|+|+||+.++.
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 47999999999999888999 9999999999999999999999999999886
No 40
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.47 E-value=3.9e-07 Score=72.73 Aligned_cols=59 Identities=22% Similarity=0.348 Sum_probs=55.2
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhc
Q 008009 392 RRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLME 451 (581)
Q Consensus 392 r~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~ 451 (581)
+.+|..+|.+++|.|+.+|+..++..+|++.++++.++..+|.+ ++|.|+|+||+.++.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~-~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTD-KDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCC-CCCcCCHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999 899999999998765
No 41
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.45 E-value=5.7e-07 Score=76.74 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=57.6
Q ss_pred hHHHHHHHHHcC--CCCCcccHHHHHHHHHH-cCCC----CCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 455 PTILRAYTSLCL--SKSGTLQKSEILASLKN-AGLP----ANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 455 e~Lr~aFk~~D~--DgdG~Is~eEf~~vLk~-lG~~----lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
+.++.+|..||. +++|+|+.+||..+++. +|.. .+.+++..++..+|.+++|.|+|++|+.++..
T Consensus 8 ~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 8 ETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 567889999999 89999999999999976 5544 35899999999999999999999999988763
No 42
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.44 E-value=7.6e-07 Score=77.54 Aligned_cols=63 Identities=16% Similarity=0.215 Sum_probs=58.2
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 455 PTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 455 e~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
..++.+|..+|.+++|.|+.+|++.+++..+ ++++++..++..+|.+++|.|+|+||+.++..
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 5678899999999999999999999999875 68899999999999999999999999988874
No 43
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.39 E-value=9.3e-07 Score=76.99 Aligned_cols=64 Identities=19% Similarity=0.246 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhcc
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~ 452 (581)
..+++.+|..+|.+++|.|+.+|+..+++.++++.+++..++..+|.+ ++|.|+|+||+.++..
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~-~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADID-NDGELDKDEFALAMHL 72 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCC-CCCCcCHHHHHHHHHH
Confidence 356889999999999999999999999999999999999999999999 8999999999987654
No 44
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.34 E-value=1.7e-06 Score=74.96 Aligned_cols=65 Identities=14% Similarity=0.245 Sum_probs=56.6
Q ss_pred hHHHHHHHH-HcCCCCC-cccHHHHHHHHHHc-----CCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 455 PTILRAYTS-LCLSKSG-TLQKSEILASLKNA-----GLPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 455 e~Lr~aFk~-~D~DgdG-~Is~eEf~~vLk~l-----G~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
..+..+|+. +|.+|+| +|+.+||+.++... +...++.++..+++.+|.|+||.|+|+||+.++..
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 567889998 7788876 99999999999876 34567889999999999999999999999988863
No 45
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.31 E-value=1.8e-06 Score=74.66 Aligned_cols=63 Identities=13% Similarity=0.255 Sum_probs=56.2
Q ss_pred HHHHHHHHHHc-CCCCC-cccHHHHHHHHHH-----cC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhcc
Q 008009 389 AEGRRFFEELD-RDGDG-QVNLEDLEIAMRK-----RK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 389 ~eLr~lF~~~D-~d~dG-~Is~eEf~~~L~~-----lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~ 452 (581)
..++++|+.|| ++++| .|+.+||+.+|+. ++ .+++++..+++.+|.+ ++|.|+|+||+.++..
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n-~dG~v~f~eF~~li~~ 79 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSD-GDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCC-CCCcCcHHHHHHHHHH
Confidence 46789999998 79999 5999999999999 66 5778899999999999 8999999999987653
No 46
>PLN02964 phosphatidylserine decarboxylase
Probab=98.27 E-value=5.2e-06 Score=94.65 Aligned_cols=119 Identities=11% Similarity=0.073 Sum_probs=92.0
Q ss_pred HHcCCCCCcccHHHHHHHHHH--cCC---CHHHHHHHHHhhcCCCCCCCcchHHHHhhhcc---chhH---HHHHHHHHc
Q 008009 397 ELDRDGDGQVNLEDLEIAMRK--RKL---PRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ---KEPT---ILRAYTSLC 465 (581)
Q Consensus 397 ~~D~d~dG~Is~eEf~~~L~~--lgl---~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~---~ee~---Lr~aFk~~D 465 (581)
.+|.+ .++.+++...... ..+ ..+++.+.|..+|.+ ++|.+ +......+.. .+.. +..+|..+|
T Consensus 115 ~~~~~---~~s~n~lv~~~e~~~t~f~~kqi~elkeaF~lfD~d-gdG~i-Lg~ilrslG~~~pte~e~~fi~~mf~~~D 189 (644)
T PLN02964 115 VFETN---RLSKNTLVGYCELDLFDFVTQEPESACESFDLLDPS-SSNKV-VGSIFVSCSIEDPVETERSFARRILAIVD 189 (644)
T ss_pred EEecC---CCCHHHhhhheeecHhhccHHHHHHHHHHHHHHCCC-CCCcC-HHHHHHHhCCCCCCHHHHHHHHHHHHHhC
Confidence 45544 4556655544432 122 235678889999999 89987 5555544431 1232 789999999
Q ss_pred CCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhC
Q 008009 466 LSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLL 520 (581)
Q Consensus 466 ~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~ 520 (581)
.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||.+++...
T Consensus 190 ~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 190 YDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred CCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 9999999999999999998888899999999999999999999999999998874
No 47
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.27 E-value=2.6e-06 Score=77.51 Aligned_cols=63 Identities=17% Similarity=0.190 Sum_probs=55.1
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCC
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLP 521 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~P 521 (581)
...+..+|..+|.|++|+|+.+|+..+. ....+..+..+|..+|.|+||.||++||...+ +.+
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl-~~~ 109 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF-IKE 109 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH-hCh
Confidence 4678899999999999999999999876 23356778999999999999999999999999 443
No 48
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=98.20 E-value=1.1e-05 Score=79.24 Aligned_cols=93 Identities=14% Similarity=0.208 Sum_probs=77.9
Q ss_pred HHHHHHHHcCCCCCc-ccHHHHHHHHHHcC---CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------------h
Q 008009 391 GRRFFEELDRDGDGQ-VNLEDLEIAMRKRK---LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------------E 454 (581)
Q Consensus 391 Lr~lF~~~D~d~dG~-Is~eEf~~~L~~lg---l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------------e 454 (581)
..+++..+|.+++|. |++++|..++..+. ...+-++-.|+.||.+ ++|.|+.+|+.+.+... .
T Consensus 68 ~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~-~~G~I~reel~~iv~~~~~~~~~~~~e~~~ 146 (187)
T KOG0034|consen 68 ADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLD-GDGFISREELKQILRMMVGENDDMSDEQLE 146 (187)
T ss_pred HHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCC-CCCcCcHHHHHHHHHHHHccCCcchHHHHH
Confidence 357788999999988 99999999998874 2334778899999999 99999999999977543 2
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHc
Q 008009 455 PTILRAYTSLCLSKSGTLQKSEILASLKNA 484 (581)
Q Consensus 455 e~Lr~aFk~~D~DgdG~Is~eEf~~vLk~l 484 (581)
.-+..+|..+|.|++|.|+.+||..++...
T Consensus 147 ~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 147 DIVDKTFEEADTDGDGKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHcC
Confidence 336678999999999999999999998654
No 49
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.20 E-value=4.5e-06 Score=72.12 Aligned_cols=66 Identities=11% Similarity=0.194 Sum_probs=57.2
Q ss_pred cHHHHHHHHHHHc-CCCCC-cccHHHHHHHHHH-cC------CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc
Q 008009 387 TEAEGRRFFEELD-RDGDG-QVNLEDLEIAMRK-RK------LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK 453 (581)
Q Consensus 387 te~eLr~lF~~~D-~d~dG-~Is~eEf~~~L~~-lg------l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ 453 (581)
..++++++|+.|| .+++| .|+..||+.+|+. +| .+.++++.+++.+|.+ ++|.|+|+||+.++...
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d-~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDEN-GDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCC-CCCcCcHHHHHHHHHHH
Confidence 4567899999997 99999 4999999999985 43 3678899999999999 89999999999987654
No 50
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.20 E-value=6.6e-06 Score=71.69 Aligned_cols=64 Identities=14% Similarity=0.283 Sum_probs=54.3
Q ss_pred HHHHHHHHHHc-CCCCC-cccHHHHHHHHHHc-C------CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc
Q 008009 389 AEGRRFFEELD-RDGDG-QVNLEDLEIAMRKR-K------LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK 453 (581)
Q Consensus 389 ~eLr~lF~~~D-~d~dG-~Is~eEf~~~L~~l-g------l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ 453 (581)
..+.++|+.|| .|++| +|+.+||+.++... + .+..++..+++.+|.+ ++|.|+|+||+.++...
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n-~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSN-KDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCC-CCCCCCHHHHHHHHHHH
Confidence 46778899999 78998 59999999999762 1 3567899999999999 89999999999987654
No 51
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.15 E-value=5.6e-06 Score=71.87 Aligned_cols=65 Identities=17% Similarity=0.200 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHcC-CC-CCcccHHHHHHHHHH-----cC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc
Q 008009 388 EAEGRRFFEELDR-DG-DGQVNLEDLEIAMRK-----RK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK 453 (581)
Q Consensus 388 e~eLr~lF~~~D~-d~-dG~Is~eEf~~~L~~-----lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ 453 (581)
..+++.+|..||. |+ +|+|+..||+.+|.. ++ ++.++++.++..+|.+ ++|.|+|+||+.++...
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~-~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQN-RDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCC-CCCcCcHHHHHHHHHHH
Confidence 4578899999997 87 699999999999986 33 5778899999999999 89999999999877643
No 52
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=98.14 E-value=1.7e-05 Score=94.41 Aligned_cols=136 Identities=15% Similarity=0.280 Sum_probs=105.5
Q ss_pred hhhccccccccccHHHHH---HHHHHHcCCCCCcccHHHHHHHHHHcCC--C-------HHHHHHHHHhhcCCCCCCCcc
Q 008009 375 KKLFSVQDFFRYTEAEGR---RFFEELDRDGDGQVNLEDLEIAMRKRKL--P-------RRYAREFMRRTRSHLFSKSFG 442 (581)
Q Consensus 375 ~kL~s~~~~~~~te~eLr---~lF~~~D~d~dG~Is~eEf~~~L~~lgl--~-------~eel~~Lf~~~D~d~gDG~Is 442 (581)
.+.+...+..-.+++.++ -+|+.||++.+|.++..+|+.+|+.+|+ | ..+++.++..+|.+ .+|.|+
T Consensus 2236 EQqIqarn~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~-r~G~Vs 2314 (2399)
T KOG0040|consen 2236 EQQIQARNHNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPN-RDGYVS 2314 (2399)
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCC-CcCccc
Confidence 333444444555666555 4599999999999999999999999973 2 24789999999999 899999
Q ss_pred hHHHHhhhccc-------hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHh----CCC----CCCc
Q 008009 443 WKQFLSLMEQK-------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFL----NAD----TEES 507 (581)
Q Consensus 443 feEF~~~L~~~-------ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~l----D~d----~DGk 507 (581)
..+|..||..+ .+.|..+|+.+|. +..||+.+++.+. ++.+++.-.+..| |.. -.+.
T Consensus 2315 l~dY~afmi~~ETeNI~s~~eIE~AfraL~a-~~~yvtke~~~~~-------ltreqaefc~s~m~~~~e~~~~~s~q~~ 2386 (2399)
T KOG0040|consen 2315 LQDYMAFMISKETENILSSEEIEDAFRALDA-GKPYVTKEELYQN-------LTREQAEFCMSKMKPYAETSSGRSDQVA 2386 (2399)
T ss_pred HHHHHHHHHhcccccccchHHHHHHHHHhhc-CCccccHHHHHhc-------CCHHHHHHHHHHhhhhcccccCCCcccc
Confidence 99999999877 4579999999998 8899999998764 3666666555544 432 2345
Q ss_pred ccHHHHHHHHHh
Q 008009 508 ISYGHFRNFMVL 519 (581)
Q Consensus 508 Is~eEF~~~lll 519 (581)
++|.+|.+-++.
T Consensus 2387 l~y~dfv~sl~~ 2398 (2399)
T KOG0040|consen 2387 LDYKDFVNSLFV 2398 (2399)
T ss_pred ccHHHHHHHHhc
Confidence 889999887653
No 53
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.13 E-value=6.7e-06 Score=80.58 Aligned_cols=80 Identities=11% Similarity=0.223 Sum_probs=66.8
Q ss_pred hHHHHhhhccchhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCCC
Q 008009 443 WKQFLSLMEQKEPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLPS 522 (581)
Q Consensus 443 feEF~~~L~~~ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~Ps 522 (581)
|.||..+-......+..+|+.||.+.||+|+..|++.+|..+|.+-|.--++.|+...|-|.||+|+|-||+-.+.....
T Consensus 87 yteF~eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaaa 166 (244)
T KOG0041|consen 87 YTEFSEFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAA 166 (244)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhc
Confidence 44444333233456778899999999999999999999999999999999999999999999999999999877765433
No 54
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.08 E-value=1e-05 Score=61.50 Aligned_cols=59 Identities=27% Similarity=0.499 Sum_probs=52.7
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhh
Q 008009 391 GRRFFEELDRDGDGQVNLEDLEIAMRKRK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLM 450 (581)
Q Consensus 391 Lr~lF~~~D~d~dG~Is~eEf~~~L~~lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L 450 (581)
++.+|..+|.+++|.|+.+||..++..++ .+.+.+..++..+|.+ ++|.|++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKD-GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC-CCCeEeHHHHHHHh
Confidence 56789999999999999999999999986 5678888999999998 89999999998765
No 55
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.07 E-value=1.3e-05 Score=68.28 Aligned_cols=65 Identities=11% Similarity=0.164 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHcC--CCCCcccHHHHHHHHHH-cC--C----CHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc
Q 008009 388 EAEGRRFFEELDR--DGDGQVNLEDLEIAMRK-RK--L----PRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK 453 (581)
Q Consensus 388 e~eLr~lF~~~D~--d~dG~Is~eEf~~~L~~-lg--l----~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ 453 (581)
.++++.+|..+|+ +++|.|+.+||..+++. ++ + +..++..++..+|.+ ++|.|+|++|+.++...
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~-~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVN-KDGKVDFQEFLVLIGKL 80 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccC-CCCcCcHHHHHHHHHHH
Confidence 3567889999999 89999999999999976 44 2 378899999999999 89999999999987654
No 56
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.07 E-value=1.2e-05 Score=69.50 Aligned_cols=62 Identities=10% Similarity=0.234 Sum_probs=54.1
Q ss_pred HHHHHHHHHcC-CC-CCcccHHHHHHHHHH---cC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhcc
Q 008009 390 EGRRFFEELDR-DG-DGQVNLEDLEIAMRK---RK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 390 eLr~lF~~~D~-d~-dG~Is~eEf~~~L~~---lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~ 452 (581)
.+-.+|+.||. ++ +|+|+.+||+.++.. +| ++.+++..+++.+|.+ ++|+|+|+||+.++..
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d-~dG~Idf~EFv~lm~~ 79 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRN-KDQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCC-CCCCCcHHHHHHHHHH
Confidence 45578999998 67 899999999999973 45 6889999999999999 8999999999987754
No 57
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.06 E-value=1.1e-05 Score=69.53 Aligned_cols=65 Identities=14% Similarity=0.236 Sum_probs=56.2
Q ss_pred hHHHHHHHHHcCC--CCCcccHHHHHHHHH-HcCCCCC----HHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 455 PTILRAYTSLCLS--KSGTLQKSEILASLK-NAGLPAN----EENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 455 e~Lr~aFk~~D~D--gdG~Is~eEf~~vLk-~lG~~lS----eeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
..+...|..|+.. ++|+|+.+||+.+|. .++..++ ++++..+|+.+|.+++|.|+|+||+.++..
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 4567789999865 489999999999996 5666666 899999999999999999999999998873
No 58
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=97.97 E-value=2.2e-05 Score=78.97 Aligned_cols=133 Identities=8% Similarity=0.183 Sum_probs=97.3
Q ss_pred cccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcC---C--CHHHHHHHHHhhcCCCCCCCcchHHHHhhhc-cc-----
Q 008009 385 RYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRK---L--PRRYAREFMRRTRSHLFSKSFGWKQFLSLME-QK----- 453 (581)
Q Consensus 385 ~~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg---l--~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~-~~----- 453 (581)
+-..+.+..+|...|.|.||+|+..|+++.+..-. + ..++.+..|+..|.+ +||.|+|+||.--+. .+
T Consensus 97 rrsrrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpd-gDGhvsWdEykvkFlaskghsek 175 (362)
T KOG4251|consen 97 RRSRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPD-GDGHVSWDEYKVKFLASKGHSEK 175 (362)
T ss_pred hHHHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCC-CCCceehhhhhhHHHhhcCcchH
Confidence 34557889999999999999999999998876521 1 235667789999999 999999999976332 21
Q ss_pred -----------------------------------------------------------hhHHHHHHHHHcCCCCCcccH
Q 008009 454 -----------------------------------------------------------EPTILRAYTSLCLSKSGTLQK 474 (581)
Q Consensus 454 -----------------------------------------------------------ee~Lr~aFk~~D~DgdG~Is~ 474 (581)
..-+..+...+|+||+-.++.
T Consensus 176 evadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSv 255 (362)
T KOG4251|consen 176 EVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSV 255 (362)
T ss_pred HHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecc
Confidence 112445567789999999999
Q ss_pred HHHHHHHH-----HcCCCCCHHH----HHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 475 SEILASLK-----NAGLPANEEN----AVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 475 eEf~~vLk-----~lG~~lSeee----l~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
.||....- +-|..+.+-. .+++=+.+|.|.||.++++|..+++.
T Consensus 256 peFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~d 308 (362)
T KOG4251|consen 256 PEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVD 308 (362)
T ss_pred hhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcC
Confidence 99876432 1244444333 44556678999999999999887754
No 59
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.96 E-value=2.3e-05 Score=71.31 Aligned_cols=62 Identities=13% Similarity=0.170 Sum_probs=52.1
Q ss_pred ccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhh
Q 008009 386 YTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLM 450 (581)
Q Consensus 386 ~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L 450 (581)
.....+.-.|..+|.|+||+|+.+||..++ ++.....+..+|..+|.| +||.|+++||...+
T Consensus 45 ~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~~~e~~~~~f~~~~D~n-~Dg~IS~~Ef~~cl 106 (116)
T cd00252 45 MCKDPVGWMFNQLDGNYDGKLSHHELAPIR--LDPNEHCIKPFFESCDLD-KDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHHHHCCCCCCcCCHHHHHHHH--ccchHHHHHHHHHHHCCC-CCCCCCHHHHHHHH
Confidence 345678888999999999999999999876 455567778899999999 89999999998876
No 60
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.94 E-value=1.5e-05 Score=61.78 Aligned_cols=50 Identities=20% Similarity=0.381 Sum_probs=44.6
Q ss_pred CCCcccHHHHHHHHHHcC---CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhcc
Q 008009 402 GDGQVNLEDLEIAMRKRK---LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 402 ~dG~Is~eEf~~~L~~lg---l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~ 452 (581)
.+|.|+.+||+.+|..+| ++.+++..+|..+|.+ ++|.|+|+||+.++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~-~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTD-GDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTS-SSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccC-CCCCCCHHHHHHHHHh
Confidence 379999999999998775 6789999999999999 8999999999998753
No 61
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.91 E-value=3.3e-05 Score=66.97 Aligned_cols=63 Identities=16% Similarity=0.280 Sum_probs=53.1
Q ss_pred HHHHHHHHH-HcCCCCC-cccHHHHHHHHHHc-------CCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhcc
Q 008009 389 AEGRRFFEE-LDRDGDG-QVNLEDLEIAMRKR-------KLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 389 ~eLr~lF~~-~D~d~dG-~Is~eEf~~~L~~l-------gl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~ 452 (581)
..+..+|+. +|++++| +|+.+||+.++... ...+.++..+++.+|.| +||.|+|+||+.++..
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d-~DG~I~f~EF~~l~~~ 80 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLN-SDGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCC-CCCcCcHHHHHHHHHH
Confidence 356788998 7788876 99999999999875 24567899999999999 8999999999987754
No 62
>PF14658 EF-hand_9: EF-hand domain
Probab=97.84 E-value=4.7e-05 Score=62.57 Aligned_cols=60 Identities=17% Similarity=0.329 Sum_probs=56.7
Q ss_pred HHHHHHcCCCCCcccHHHHHHHHHHcCC-CCCHHHHHHHHHHhCCCCC-CcccHHHHHHHHH
Q 008009 459 RAYTSLCLSKSGTLQKSEILASLKNAGL-PANEENAVAMMRFLNADTE-ESISYGHFRNFMV 518 (581)
Q Consensus 459 ~aFk~~D~DgdG~Is~eEf~~vLk~lG~-~lSeeel~~Lf~~lD~d~D-GkIs~eEF~~~ll 518 (581)
.+|..+|.+++|.|...++..+|+.++. ..++.+++.+.+.+|.++. |.|+++.|+..|.
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMR 63 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHH
Confidence 3799999999999999999999999988 8899999999999999998 9999999998886
No 63
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=97.83 E-value=7.8e-05 Score=80.93 Aligned_cols=119 Identities=19% Similarity=0.314 Sum_probs=90.9
Q ss_pred HHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHh----hcCCCCCCCcchHHHHhhhccc-----hhHHHHHHHHHc
Q 008009 395 FEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRR----TRSHLFSKSFGWKQFLSLMEQK-----EPTILRAYTSLC 465 (581)
Q Consensus 395 F~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~----~D~d~gDG~IsfeEF~~~L~~~-----ee~Lr~aFk~~D 465 (581)
|-.+|.|+||.|+.++|+..-... ++..-++++|.. .-.. .+|+++|++|+.++... ...+.-.|+.+|
T Consensus 284 FweLD~Dhd~lidk~~L~ry~d~t-lt~~ivdRIFs~v~r~~~~~-~eGrmdykdFv~FilA~e~k~t~~SleYwFrclD 361 (493)
T KOG2562|consen 284 FWELDTDHDGLIDKEDLKRYGDHT-LTERIVDRIFSQVPRGFTVK-VEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLD 361 (493)
T ss_pred HhhhccccccccCHHHHHHHhccc-hhhHHHHHHHhhccccceee-ecCcccHHHHHHHHHHhccCCCccchhhheeeee
Confidence 778999999999999999875542 345677888882 2233 68999999999987654 456888999999
Q ss_pred CCCCCcccHHHHHHHHHHc-------C-CCCC-HHHHHHHHHHhCCCCCCcccHHHHHH
Q 008009 466 LSKSGTLQKSEILASLKNA-------G-LPAN-EENAVAMMRFLNADTEESISYGHFRN 515 (581)
Q Consensus 466 ~DgdG~Is~eEf~~vLk~l-------G-~~lS-eeel~~Lf~~lD~d~DGkIs~eEF~~ 515 (581)
.+++|.|+..|++-+.... + ..+. ++.+.+|+..+.....++|++.+|..
T Consensus 362 ld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~ 420 (493)
T KOG2562|consen 362 LDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPEDENKITLQDLKG 420 (493)
T ss_pred ccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccCCCceeHHHHhh
Confidence 9999999999998765432 2 2222 33455677777777899999999986
No 64
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.62 E-value=0.00021 Score=66.66 Aligned_cols=99 Identities=15% Similarity=0.312 Sum_probs=69.6
Q ss_pred CCCCHHHHHHHHHhcCCCCC--------CCcchh----hhcccccccc-----------ccHHHHHHHHHHHcCCCCCcc
Q 008009 350 STVSLTELIELLPQLGRTSK--------DHPDKK----KLFSVQDFFR-----------YTEAEGRRFFEELDRDGDGQV 406 (581)
Q Consensus 350 skIS~~EL~e~LkqLg~~~~--------~~pd~~----kL~s~~~~~~-----------~te~eLr~lF~~~D~d~dG~I 406 (581)
.+|+.....+.|+.+|.+|+ ..+..+ +.++++.+.. .+-+++-+-++.||++++|.|
T Consensus 26 ~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~t~edfvegLrvFDkeg~G~i 105 (152)
T KOG0030|consen 26 GKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQGTYEDFVEGLRVFDKEGNGTI 105 (152)
T ss_pred ccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccCcHHHHHHHHHhhcccCCcce
Confidence 47788888888888886652 223333 3333333322 244566666788899999999
Q ss_pred cHHHHHHHHHHcC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhh
Q 008009 407 NLEDLEIAMRKRK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLM 450 (581)
Q Consensus 407 s~eEf~~~L~~lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L 450 (581)
...||+.+|..+| ++.+++..++.... | .+|.|+|+.|++.+
T Consensus 106 ~~aeLRhvLttlGekl~eeEVe~Llag~e-D-~nG~i~YE~fVk~i 149 (152)
T KOG0030|consen 106 MGAELRHVLTTLGEKLTEEEVEELLAGQE-D-SNGCINYEAFVKHI 149 (152)
T ss_pred eHHHHHHHHHHHHhhccHHHHHHHHcccc-c-cCCcCcHHHHHHHH
Confidence 9999999998887 88888888877764 3 47889999988744
No 65
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=97.58 E-value=0.00035 Score=66.24 Aligned_cols=61 Identities=20% Similarity=0.268 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
...++.+|..+|.|++|.|+.++++.++..+|...+++++++||... .|-|+|.-|+.++-
T Consensus 31 IqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea----~gPINft~FLTmfG 91 (171)
T KOG0031|consen 31 IQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEA----PGPINFTVFLTMFG 91 (171)
T ss_pred HHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhC----CCCeeHHHHHHHHH
Confidence 45677788888888888888888888888888778888888777653 45666666666554
No 66
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=97.56 E-value=0.00021 Score=70.29 Aligned_cols=62 Identities=21% Similarity=0.500 Sum_probs=53.9
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHH--HHHHHHHhhcCCCCCCCcchHHHHhhhc
Q 008009 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRR--YAREFMRRTRSHLFSKSFGWKQFLSLME 451 (581)
Q Consensus 389 ~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~e--el~~Lf~~~D~d~gDG~IsfeEF~~~L~ 451 (581)
..+...|+.||.+.||+|++.||+.+|.++|.|.. -++.++...|.| .||+|+|.||+-++.
T Consensus 99 k~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded-~dgklSfreflLIfr 162 (244)
T KOG0041|consen 99 KDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDED-FDGKLSFREFLLIFR 162 (244)
T ss_pred HHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcc-cccchhHHHHHHHHH
Confidence 34556799999999999999999999999997764 468899999999 899999999987554
No 67
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=97.55 E-value=0.00018 Score=77.76 Aligned_cols=120 Identities=13% Similarity=0.111 Sum_probs=94.5
Q ss_pred HcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc--------------------hhHH
Q 008009 398 LDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK--------------------EPTI 457 (581)
Q Consensus 398 ~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~--------------------ee~L 457 (581)
+|.+.+|-|++.|..-++.-|.+|....+-.|+.+|.| +||.|+-+||...+... ...+
T Consensus 208 ~~lg~~GLIsfSdYiFLlTlLS~p~~~F~IAFKMFD~d-gnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~ 286 (489)
T KOG2643|consen 208 YKLGESGLISFSDYIFLLTLLSIPERNFRIAFKMFDLD-GNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEV 286 (489)
T ss_pred EEcCCCCeeeHHHHHHHHHHHccCcccceeeeeeeecC-CCCcccHHHHHHHHHHHHhccccceecccCccccceehhhh
Confidence 45677899999999999998899999999999999999 99999999998855311 1011
Q ss_pred HH--HHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCCC
Q 008009 458 LR--AYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLPS 522 (581)
Q Consensus 458 r~--aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~Ps 522 (581)
.. .-..|-.+++|.++.+||.++++++. +|-++.-|..+|....|.|+-.+|..+++....
T Consensus 287 nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq----~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~ 349 (489)
T KOG2643|consen 287 NSALLTYFFGKRGNGKLSIDEFLKFQENLQ----EEILELEFERFDKGDSGAISEVDFAELLLAYAG 349 (489)
T ss_pred hhhHHHHhhccCCCccccHHHHHHHHHHHH----HHHHHHHHHHhCcccccccCHHHHHHHHHHHcc
Confidence 11 22346789999999999999998874 344555678888888899999999888887643
No 68
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.53 E-value=0.00011 Score=50.77 Aligned_cols=29 Identities=38% Similarity=0.757 Sum_probs=25.1
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHc
Q 008009 390 EGRRFFEELDRDGDGQVNLEDLEIAMRKR 418 (581)
Q Consensus 390 eLr~lF~~~D~d~dG~Is~eEf~~~L~~l 418 (581)
+++.+|+.+|+|+||+|+.+||..+++++
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 57789999999999999999999988764
No 69
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.50 E-value=0.00028 Score=60.85 Aligned_cols=62 Identities=10% Similarity=0.179 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCC--CCCcccHHHHHHHHHH-cC--CC----HHHHHHHHHhhcCCCCCCCcchHHHHhhhcc
Q 008009 390 EGRRFFEELDRD--GDGQVNLEDLEIAMRK-RK--LP----RRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 390 eLr~lF~~~D~d--~dG~Is~eEf~~~L~~-lg--l~----~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~ 452 (581)
.+-..|+.++.. .+|.|+.+||+.+|.. ++ ++ .+++..+|..+|.+ ++|.|+|+||+.++..
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d-~dG~I~f~eF~~~~~~ 79 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTN-QDGQLSFEEFLVLVIK 79 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCC-CCCcCcHHHHHHHHHH
Confidence 456789999975 4799999999999974 33 44 78899999999999 8999999999987754
No 70
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.47 E-value=0.00014 Score=50.22 Aligned_cols=27 Identities=15% Similarity=0.254 Sum_probs=18.5
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHH
Q 008009 457 ILRAYTSLCLSKSGTLQKSEILASLKN 483 (581)
Q Consensus 457 Lr~aFk~~D~DgdG~Is~eEf~~vLk~ 483 (581)
++.+|+.||+|++|+|+.+||..+++.
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 456677777777777777777766654
No 71
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.41 E-value=0.0013 Score=71.54 Aligned_cols=52 Identities=15% Similarity=0.187 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
...++.+|+.+|.|++|+|+.+||.. +..+|..+|.|+||.|+++||...+.
T Consensus 333 ~~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~ 384 (391)
T PRK12309 333 THAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLG 384 (391)
T ss_pred hHHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 45678899999999999999999942 57899999999999999999998775
No 72
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.39 E-value=0.00081 Score=58.78 Aligned_cols=64 Identities=6% Similarity=0.202 Sum_probs=52.5
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHc-----CCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 455 PTILRAYTSLCLSKSGTLQKSEILASLKNA-----GLPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 455 e~Lr~aFk~~D~DgdG~Is~eEf~~vLk~l-----G~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
..+-.+|..|- .+.+.++..||+.+|... .-.-++..++.+|+.+|.|+||.|+|.||+.++..
T Consensus 8 ~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~ 76 (91)
T cd05024 8 EKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAG 76 (91)
T ss_pred HHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 45667888887 456799999999998643 33446788999999999999999999999988763
No 73
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=97.36 E-value=0.0014 Score=71.55 Aligned_cols=150 Identities=11% Similarity=0.195 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHc--CCC-------HH----H----HHHHHHhhcCCCCCCCcchHHHHh--
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKR--KLP-------RR----Y----AREFMRRTRSHLFSKSFGWKQFLS-- 448 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~l--gl~-------~e----e----l~~Lf~~~D~d~gDG~IsfeEF~~-- 448 (581)
...+.+++..++..+.|++...+|...|..+ ..+ ++ + ++.+|-.++.. +.|+|+..|...
T Consensus 173 ~t~~~~~v~~l~~~~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~~~Y~~tvi~rIFy~~nrs-~tG~iti~el~~sn 251 (493)
T KOG2562|consen 173 HTRLEQFVNLLIQAGCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQERYAETVIQRIFYYLNRS-RTGRITIQELLRSN 251 (493)
T ss_pred HHHHHHHHHHHhccCccceeccccHHHHHHHHhcCCchhhccChhHHHHHHHHHhhhhheeeCCc-cCCceeHHHHHHhH
Confidence 4566678888888889999999888888776 111 11 1 34566666777 799998888655
Q ss_pred ---hhccc--------------hhHHHHH---HHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHH----hCCCC
Q 008009 449 ---LMEQK--------------EPTILRA---YTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRF----LNADT 504 (581)
Q Consensus 449 ---~L~~~--------------ee~Lr~a---Fk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~----lD~d~ 504 (581)
.|... -+....+ |..+|+|++|.|+.+++...-.. .++.--++.||.. .-...
T Consensus 252 ll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~---tlt~~ivdRIFs~v~r~~~~~~ 328 (493)
T KOG2562|consen 252 LLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDH---TLTERIVDRIFSQVPRGFTVKV 328 (493)
T ss_pred HHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhcc---chhhHHHHHHHhhccccceeee
Confidence 22211 1223333 77889999999999999876433 3455667888883 33456
Q ss_pred CCcccHHHHHHHHHhCCCCCCccchHHHHHhcCeeecCCCC
Q 008009 505 EESISYGHFRNFMVLLPSDRLQDDPRSIWFEAATVVAVPPP 545 (581)
Q Consensus 505 DGkIs~eEF~~~lll~Ps~~l~d~irs~W~e~~tvidV~~~ 545 (581)
+|+++|++|+.|++..-..+-...+. ||+. .+|+...
T Consensus 329 eGrmdykdFv~FilA~e~k~t~~Sle-YwFr---clDld~~ 365 (493)
T KOG2562|consen 329 EGRMDYKDFVDFILAEEDKDTPASLE-YWFR---CLDLDGD 365 (493)
T ss_pred cCcccHHHHHHHHHHhccCCCccchh-hhee---eeeccCC
Confidence 89999999999999775555445555 8863 4454443
No 74
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=97.35 E-value=0.00022 Score=74.48 Aligned_cols=119 Identities=10% Similarity=0.144 Sum_probs=95.4
Q ss_pred CCCCcccHHHHHHHHHHcCCCH-HHHHHHHHhhcCCCCCCCcchHHHHhhhccc------hhHHHHHHHHHcCCCCCccc
Q 008009 401 DGDGQVNLEDLEIAMRKRKLPR-RYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------EPTILRAYTSLCLSKSGTLQ 473 (581)
Q Consensus 401 d~dG~Is~eEf~~~L~~lgl~~-eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------ee~Lr~aFk~~D~DgdG~Is 473 (581)
.+.+.|...||..-++ ++. +-+..+|..||.+ ++|.++|.|.+..+... ...++-+|+.|+.+.||++.
T Consensus 239 ~kg~~igi~efa~~l~---vpvsd~l~~~f~LFde~-~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~g 314 (412)
T KOG4666|consen 239 AKGPDIGIVEFAVNLR---VPVSDKLAPTFMLFDEG-TTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISG 314 (412)
T ss_pred ccCCCcceeEeeeeee---cchhhhhhhhhheecCC-CCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccc
Confidence 4556777777765443 233 4568899999999 89999999998876644 67789999999999999999
Q ss_pred HHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCCCCC
Q 008009 474 KSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLPSDR 524 (581)
Q Consensus 474 ~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~Ps~~ 524 (581)
.++|.-+|+.. ..+.+-.+-.+|..++...+++|+|.+|.+|+...|.-.
T Consensus 315 e~~ls~ilq~~-lgv~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~~p~~a 364 (412)
T KOG4666|consen 315 EHILSLILQVV-LGVEVLRVPVLFPSIEQKDDPKIYASNFRKFAATEPNLA 364 (412)
T ss_pred hHHHHHHHHHh-cCcceeeccccchhhhcccCcceeHHHHHHHHHhCchhh
Confidence 99999988764 223334466789999999999999999999999998644
No 75
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.26 E-value=0.0019 Score=73.80 Aligned_cols=63 Identities=19% Similarity=0.265 Sum_probs=55.1
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 455 PTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 455 e~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
-+.+++|+.+|+..+|+++-.+-+.+|...++ ....+.+|....|.|+||+++-+||+-.|.+
T Consensus 195 lKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~L--pq~~LA~IW~LsDvd~DGkL~~dEfilam~l 257 (1118)
T KOG1029|consen 195 LKYRQLFNALDKTRSGYLSGQQARSALGQSGL--PQNQLAHIWTLSDVDGDGKLSADEFILAMHL 257 (1118)
T ss_pred hHHHHHhhhcccccccccccHHHHHHHHhcCC--chhhHhhheeeeccCCCCcccHHHHHHHHHH
Confidence 34688999999999999999999999987765 5667899999999999999999999876664
No 76
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.26 E-value=0.00036 Score=48.43 Aligned_cols=30 Identities=20% Similarity=0.295 Sum_probs=25.3
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHH-HcC
Q 008009 456 TILRAYTSLCLSKSGTLQKSEILASLK-NAG 485 (581)
Q Consensus 456 ~Lr~aFk~~D~DgdG~Is~eEf~~vLk-~lG 485 (581)
+++.+|+.||.|++|+|+.+||+.+|+ .+|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 367899999999999999999999998 454
No 77
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion]
Probab=97.24 E-value=7.2e-05 Score=78.86 Aligned_cols=30 Identities=27% Similarity=0.314 Sum_probs=27.7
Q ss_pred chhhhhhhchhhhhhhccccCccccccCCC
Q 008009 552 SVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 552 ~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
..+.+|+||++||.+|.++|||||+||||+
T Consensus 125 ~~~~~l~aGalAG~~a~~~tyPLDlvRtRL 154 (320)
T KOG0752|consen 125 SPLVRLVAGALAGMTATLATYPLDLLRTRL 154 (320)
T ss_pred chhHHHHHHHHHHHHHHHhcCcHHHhhhhe
Confidence 347889999999999999999999999995
No 78
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.16 E-value=0.00055 Score=47.49 Aligned_cols=30 Identities=33% Similarity=0.613 Sum_probs=26.1
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHH-HcC
Q 008009 390 EGRRFFEELDRDGDGQVNLEDLEIAMR-KRK 419 (581)
Q Consensus 390 eLr~lF~~~D~d~dG~Is~eEf~~~L~-~lg 419 (581)
+++.+|+.+|.|++|+|+.+||..+|+ ++|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 578999999999999999999999998 564
No 79
>PF14658 EF-hand_9: EF-hand domain
Probab=97.04 E-value=0.0011 Score=54.63 Aligned_cols=59 Identities=19% Similarity=0.317 Sum_probs=52.4
Q ss_pred HHHHHcCCCCCcccHHHHHHHHHHcC---CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhcc
Q 008009 394 FFEELDRDGDGQVNLEDLEIAMRKRK---LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 394 lF~~~D~d~dG~Is~eEf~~~L~~lg---l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~ 452 (581)
+|..+|.++.|.|...++..+|+..+ .++.+++.+.+.+|.+..+|.|+++.|+..|+.
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 68899999999999999999999986 456889999999999944499999999998864
No 80
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.04 E-value=0.0015 Score=58.42 Aligned_cols=62 Identities=18% Similarity=0.283 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhc
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLME 451 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~ 451 (581)
...+..+|..+|. .+|.|+.++...++...+++.+.+..++...|.+ ++|.++++||+..|.
T Consensus 9 ~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~L~~~~L~~IW~LaD~~-~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 9 KQKYDQIFQSLDP-QDGKISGDQAREFFMKSGLPRDVLAQIWNLADID-NDGKLDFEEFAIAMH 70 (104)
T ss_dssp HHHHHHHHHCTSS-STTEEEHHHHHHHHHHTTSSHHHHHHHHHHH-SS-SSSEEEHHHHHHHHH
T ss_pred HHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcCCCHHHHHHHHhhhcCC-CCCcCCHHHHHHHHH
Confidence 4567789998885 5899999999999999999999999999999999 899999999998764
No 81
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=96.96 E-value=0.0079 Score=66.10 Aligned_cols=133 Identities=14% Similarity=0.163 Sum_probs=87.7
Q ss_pred ccHHHHHHHHH---HHcCCCCCcccHHHHHHHHHHc-C---CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhc---cchh
Q 008009 386 YTEAEGRRFFE---ELDRDGDGQVNLEDLEIAMRKR-K---LPRRYAREFMRRTRSHLFSKSFGWKQFLSLME---QKEP 455 (581)
Q Consensus 386 ~te~eLr~lF~---~~D~d~dG~Is~eEf~~~L~~l-g---l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~---~~ee 455 (581)
-..++++.+|- ..+.++.-+.+.++|....--+ + ..++..+.+-...|.. .||-|+|+||+.+-. ....
T Consensus 30 a~~~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~t-KDglisf~eF~afe~~lC~pDa 108 (694)
T KOG0751|consen 30 ADPKELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQT-KDGLISFQEFRAFESVLCAPDA 108 (694)
T ss_pred CChHHHHHHHHHHhHHhhccccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhc-ccccccHHHHHHHHhhccCchH
Confidence 34556666654 3456666778888887654433 2 3444445555555666 788888888876432 2255
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHcCC------CC-----------------------------CHHHHHHHHHHh
Q 008009 456 TILRAYTSLCLSKSGTLQKSEILASLKNAGL------PA-----------------------------NEENAVAMMRFL 500 (581)
Q Consensus 456 ~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~------~l-----------------------------Seeel~~Lf~~l 500 (581)
....+|..||+.++|.++.+++.+++....+ +. -.|...+.|+..
T Consensus 109 l~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~qafr~~ 188 (694)
T KOG0751|consen 109 LFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQLEHAEQAFREK 188 (694)
T ss_pred HHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677888888888888888888888765311 00 123345667778
Q ss_pred CCCCCCcccHHHHHHHHHh
Q 008009 501 NADTEESISYGHFRNFMVL 519 (581)
Q Consensus 501 D~d~DGkIs~eEF~~~lll 519 (581)
|+.+.|.|+--+|.+.|..
T Consensus 189 d~~~ng~is~Ldfq~imvt 207 (694)
T KOG0751|consen 189 DKAKNGFISVLDFQDIMVT 207 (694)
T ss_pred cccCCCeeeeechHhhhhh
Confidence 9999999988888776653
No 82
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=96.94 E-value=0.0016 Score=70.57 Aligned_cols=61 Identities=16% Similarity=0.297 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHcC------CCHHHHHHHHHhhcCCCCCCCcchHHHHhh
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKRK------LPRRYAREFMRRTRSHLFSKSFGWKQFLSL 449 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg------l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~ 449 (581)
...+..+|..+|.|++|.|+.+||++++.-++ ++.+++.++.+.+|-| +||.|++.||+..
T Consensus 546 ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~N-kDG~IDlNEfLeA 612 (631)
T KOG0377|consen 546 KSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLN-KDGKIDLNEFLEA 612 (631)
T ss_pred hhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccC-CCCcccHHHHHHH
Confidence 35688999999999999999999999988773 6788999999999999 9999999999873
No 83
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=96.66 E-value=0.015 Score=66.98 Aligned_cols=131 Identities=13% Similarity=0.259 Sum_probs=108.1
Q ss_pred cHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc--hhHHHHHHH
Q 008009 387 TEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK--EPTILRAYT 462 (581)
Q Consensus 387 te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~--ee~Lr~aFk 462 (581)
.+.-+..+|+..|++.+|.++..+...++..++ +....+..+|+..+.. .++++.+++|..+.... ...+..+|.
T Consensus 134 ~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~-~~~k~~~~~~~~~~~~~~~rpev~~~f~ 212 (746)
T KOG0169|consen 134 REHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNS-QTGKLEEEEFVKFRKELTKRPEVYFLFV 212 (746)
T ss_pred HHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhh-ccceehHHHHHHHHHhhccCchHHHHHH
Confidence 345678899999999999999999999999986 5677888899998887 89999999999876644 347888888
Q ss_pred HHcCCCCCcccHHHHHHHHHHcC--CCCCHHHHHHHHHHhCCC----CCCcccHHHHHHHHHh
Q 008009 463 SLCLSKSGTLQKSEILASLKNAG--LPANEENAVAMMRFLNAD----TEESISYGHFRNFMVL 519 (581)
Q Consensus 463 ~~D~DgdG~Is~eEf~~vLk~lG--~~lSeeel~~Lf~~lD~d----~DGkIs~eEF~~~lll 519 (581)
.+- ++.++++.+++..+|.... ..++.+.+..|++.+... ..+.++++.|.+||..
T Consensus 213 ~~s-~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~S 274 (746)
T KOG0169|consen 213 QYS-HGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLFS 274 (746)
T ss_pred HHh-CCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccccceecHHHHHHHhcC
Confidence 875 4489999999999998763 466888899999887544 3456999999999874
No 84
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.61 E-value=0.006 Score=47.76 Aligned_cols=48 Identities=15% Similarity=0.191 Sum_probs=40.3
Q ss_pred ccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 472 LQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 472 Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
++..|++.+|+.+.+.++++.+..+|+..|.+++|.+..+||..|+..
T Consensus 2 msf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp BEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999998863
No 85
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.57 E-value=0.0025 Score=42.49 Aligned_cols=23 Identities=13% Similarity=0.141 Sum_probs=14.7
Q ss_pred HHHHHHHcCCCCCcccHHHHHHH
Q 008009 458 LRAYTSLCLSKSGTLQKSEILAS 480 (581)
Q Consensus 458 r~aFk~~D~DgdG~Is~eEf~~v 480 (581)
+.+|+.+|.|++|.|+.+||.++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 45666666666666666666654
No 86
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.50 E-value=0.0031 Score=42.06 Aligned_cols=25 Identities=28% Similarity=0.676 Sum_probs=20.5
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHH
Q 008009 391 GRRFFEELDRDGDGQVNLEDLEIAM 415 (581)
Q Consensus 391 Lr~lF~~~D~d~dG~Is~eEf~~~L 415 (581)
|+.+|+.+|.|+||.|+.+||.+++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4578888999999999999988753
No 87
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=96.49 E-value=0.011 Score=51.80 Aligned_cols=62 Identities=18% Similarity=0.225 Sum_probs=49.0
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHc-C------CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc
Q 008009 390 EGRRFFEELDRDGDGQVNLEDLEIAMRKR-K------LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK 453 (581)
Q Consensus 390 eLr~lF~~~D~d~dG~Is~eEf~~~L~~l-g------l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ 453 (581)
.+-.+|+.|-. +.+.++..||+.++.+= . -.+..+..++..+|.| +||.|+|.||+.++...
T Consensus 9 ~lI~~FhkYaG-~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n-~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 9 KMMLTFHKFAG-EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDC-RDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHcC-CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCC-CCCcCcHHHHHHHHHHH
Confidence 45577888874 45799999999998652 1 2457788999999999 89999999999887654
No 88
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.38 E-value=0.012 Score=52.71 Aligned_cols=62 Identities=13% Similarity=0.228 Sum_probs=53.0
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 455 PTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 455 e~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
.....+|..+|. ++|.|+.++.+.++...+ ++.+.+.+|....|.|+||+++++||.-.|.+
T Consensus 10 ~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~--L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 10 QKYDQIFQSLDP-QDGKISGDQAREFFMKSG--LPRDVLAQIWNLADIDNDGKLDFEEFAIAMHL 71 (104)
T ss_dssp HHHHHHHHCTSS-STTEEEHHHHHHHHHHTT--SSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHhcCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHH
Confidence 445678999884 689999999999998876 46789999999999999999999999887764
No 89
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.34 E-value=0.0061 Score=66.44 Aligned_cols=49 Identities=20% Similarity=0.230 Sum_probs=22.5
Q ss_pred HHHHHHHhhcCCCCCCCcchHHHHhhhccchhHHHHHHHHHcCCCCCcccHHHHHHHH
Q 008009 424 YAREFMRRTRSHLFSKSFGWKQFLSLMEQKEPTILRAYTSLCLSKSGTLQKSEILASL 481 (581)
Q Consensus 424 el~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ee~Lr~aFk~~D~DgdG~Is~eEf~~vL 481 (581)
++..+|+.+|.+ +||.|+++||.. ...+|..+|.|++|.|+.+||.+.+
T Consensus 335 ~l~~aF~~~D~d-gdG~Is~~E~~~--------~~~~F~~~D~d~DG~Is~eEf~~~~ 383 (391)
T PRK12309 335 AAQEIFRLYDLD-GDGFITREEWLG--------SDAVFDALDLNHDGKITPEEMRAGL 383 (391)
T ss_pred HHHHHHHHhCCC-CCCcCcHHHHHH--------HHHHHHHhCCCCCCCCcHHHHHHHH
Confidence 344444444444 444444444432 1234455555555555555554444
No 90
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.22 E-value=0.01 Score=46.53 Aligned_cols=34 Identities=21% Similarity=0.458 Sum_probs=16.1
Q ss_pred ccccHHHHHHHHHHHcCCCCCcccHHHHHHHHHH
Q 008009 384 FRYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRK 417 (581)
Q Consensus 384 ~~~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~ 417 (581)
+...+.....+|+..|+.++|.+..+||..+++.
T Consensus 16 I~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 16 IEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp ----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 4445555555555555555555555555555543
No 91
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ]. Such proteins include: ADP, ATP carrier protein (ADP/ATP translocase); 2-oxoglutarate/malate carrier protein; phosphate carrier protein; tricarboxylate transport protein (or citrate transport protein); Graves disease carrier protein; yeast mitochondrial proteins MRS3 and MRS4; yeast mitochondrial FAD carrier protein; and many others. Structurally, these proteins can consist of up to three tandem repeats of a domain of approximately 100 residues, each domain containing two transmembrane regions.; PDB: 2LCK_A 2C3E_A 1OKC_A.
Probab=95.95 E-value=0.00084 Score=57.23 Aligned_cols=29 Identities=41% Similarity=0.568 Sum_probs=27.0
Q ss_pred chhhhhhhchhhhhhhccccCccccccCC
Q 008009 552 SVLKSALAGGLSCALSTSLMHPVDTIKAN 580 (581)
Q Consensus 552 ~~~k~fLAGGiAGAvSrT~taPLDrlKTR 580 (581)
.++..+++|++||+++..++||||++|||
T Consensus 3 ~~~~~~~~g~~ag~~~~~~~~Pld~ik~~ 31 (95)
T PF00153_consen 3 SFFANFIAGALAGAISTLVTYPLDTIKTR 31 (95)
T ss_dssp CCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhHHHHHhHh
Confidence 46788999999999999999999999997
No 92
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=95.92 E-value=0.023 Score=53.72 Aligned_cols=90 Identities=16% Similarity=0.148 Sum_probs=66.9
Q ss_pred HHHHHcCCCCCcccHHHHHHHHHHcC-CCHHH--HHHHHHhhcCCCCCCCcchHHHHhhhccc----------hhHHHHH
Q 008009 394 FFEELDRDGDGQVNLEDLEIAMRKRK-LPRRY--AREFMRRTRSHLFSKSFGWKQFLSLMEQK----------EPTILRA 460 (581)
Q Consensus 394 lF~~~D~d~dG~Is~eEf~~~L~~lg-l~~ee--l~~Lf~~~D~d~gDG~IsfeEF~~~L~~~----------ee~Lr~a 460 (581)
+-+.|-.|+.|.+++++|...+.-+. ..+.+ +.-.|+.||-| +|+.|.-++....+... +--..++
T Consensus 76 i~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd-~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekv 154 (189)
T KOG0038|consen 76 ICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFD-GDEFIGHDDLEKTLTSLTRDELSDEEVELICEKV 154 (189)
T ss_pred HHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecC-CCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHH
Confidence 34455678999999999998876653 33333 34677889999 89999988887766544 1224566
Q ss_pred HHHHcCCCCCcccHHHHHHHHHHc
Q 008009 461 YTSLCLSKSGTLQKSEILASLKNA 484 (581)
Q Consensus 461 Fk~~D~DgdG~Is~eEf~~vLk~l 484 (581)
....|.||+|.|+..||..++...
T Consensus 155 ieEAD~DgDgkl~~~eFe~~i~ra 178 (189)
T KOG0038|consen 155 IEEADLDGDGKLSFAEFEHVILRA 178 (189)
T ss_pred HHHhcCCCCCcccHHHHHHHHHhC
Confidence 778899999999999999887654
No 93
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=95.82 E-value=0.0039 Score=56.54 Aligned_cols=60 Identities=20% Similarity=0.262 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHH
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRN 515 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~ 515 (581)
...+...|..+|.|++|+|+..|+..+...+ ...+.-+..+++..|.|+||.|++.||..
T Consensus 53 ~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 53 KRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 4556778999999999999999988776544 23445578899999999999999999864
No 94
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion]
Probab=95.72 E-value=0.0023 Score=67.78 Aligned_cols=28 Identities=25% Similarity=0.513 Sum_probs=26.1
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
|..|++|++||++|+|++||||+||.|+
T Consensus 224 ~~~l~~GalAG~~aqti~yPlD~vRrrm 251 (320)
T KOG0752|consen 224 FERLLCGALAGAVAQTITYPLDTVRRRM 251 (320)
T ss_pred HHHHHHHHHHHHHHhhhcccHHHHHHHH
Confidence 6789999999999999999999999874
No 95
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.67 E-value=0.036 Score=63.74 Aligned_cols=62 Identities=16% Similarity=0.247 Sum_probs=57.4
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhc
Q 008009 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLME 451 (581)
Q Consensus 389 ~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~ 451 (581)
-.++++|+.+|+..+|+++-..-+.+|-..++|...+..++..-|.| +||+++.+||...|.
T Consensus 195 lKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~Lpq~~LA~IW~LsDvd-~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 195 LKYRQLFNALDKTRSGYLSGQQARSALGQSGLPQNQLAHIWTLSDVD-GDGKLSADEFILAMH 256 (1118)
T ss_pred hHHHHHhhhcccccccccccHHHHHHHHhcCCchhhHhhheeeeccC-CCCcccHHHHHHHHH
Confidence 35679999999999999999999999999999999999999999999 999999999998654
No 96
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=95.65 E-value=0.017 Score=58.63 Aligned_cols=57 Identities=9% Similarity=0.073 Sum_probs=46.6
Q ss_pred HHHHHHHHhhcCCCCCCCcchHHHHhhhccc--------hhHHHHHHHHHcCCCCCcccHHHHHHH
Q 008009 423 RYAREFMRRTRSHLFSKSFGWKQFLSLMEQK--------EPTILRAYTSLCLSKSGTLQKSEILAS 480 (581)
Q Consensus 423 eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~--------ee~Lr~aFk~~D~DgdG~Is~eEf~~v 480 (581)
+.+..+|...|.| .|+.|+-.|..+.+... .+.-+..|+..|.|++|.|+.+|++--
T Consensus 101 rklmviFsKvDVN-tDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvk 165 (362)
T KOG4251|consen 101 RKLMVIFSKVDVN-TDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVK 165 (362)
T ss_pred HHHHHHHhhcccC-ccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhH
Confidence 4577899999999 89999999998866544 233455689999999999999999753
No 97
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.49 E-value=0.023 Score=51.79 Aligned_cols=57 Identities=23% Similarity=0.353 Sum_probs=42.5
Q ss_pred HHHHHcCCCCCcccHHHHHHHHHHc------C---CCC-CHHHH----HHHHHHhCCCCCCcccHHHHHHH
Q 008009 460 AYTSLCLSKSGTLQKSEILASLKNA------G---LPA-NEENA----VAMMRFLNADTEESISYGHFRNF 516 (581)
Q Consensus 460 aFk~~D~DgdG~Is~eEf~~vLk~l------G---~~l-Seeel----~~Lf~~lD~d~DGkIs~eEF~~~ 516 (581)
-|++.|.|++|.|+--|+..++... | .++ ++.++ +.+++.-|.|+||.|+|.||+..
T Consensus 72 YF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 72 YFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 4788889999999988888887543 2 222 45554 45566779999999999999853
No 98
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=95.43 E-value=0.0061 Score=55.27 Aligned_cols=57 Identities=23% Similarity=0.303 Sum_probs=27.1
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHH
Q 008009 390 EGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFL 447 (581)
Q Consensus 390 eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~ 447 (581)
.+.-.|..+|.|+||.|+..|+..+...+..++.-+..+++..|.| +|+.|++.|+.
T Consensus 55 ~~~W~F~~LD~n~d~~L~~~El~~l~~~l~~~e~C~~~F~~~CD~n-~d~~Is~~EW~ 111 (113)
T PF10591_consen 55 VVHWKFCQLDRNKDGVLDRSELKPLRRPLMPPEHCARPFFRSCDVN-KDGKISLDEWC 111 (113)
T ss_dssp HHHHHHHHH--T-SSEE-TTTTGGGGSTTSTTGGGHHHHHHHH-TT--SSSEEHHHHH
T ss_pred hhhhhHhhhcCCCCCccCHHHHHHHHHHHhhhHHHHHHHHHHcCCC-CCCCCCHHHHc
Confidence 3444466666666666666666555444333333445555555555 55666655553
No 99
>PTZ00168 mitochondrial carrier protein; Provisional
Probab=95.18 E-value=0.0043 Score=63.45 Aligned_cols=28 Identities=39% Similarity=0.653 Sum_probs=25.7
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
+..+++|++||+++.++|||+|+||||.
T Consensus 180 ~~~~~aG~~ag~~a~~~t~P~DvvKtr~ 207 (259)
T PTZ00168 180 ITSAICGGLAGGIAGFLTTPVDVIKSRQ 207 (259)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHH
Confidence 4568999999999999999999999984
No 100
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=95.00 E-value=0.06 Score=65.69 Aligned_cols=68 Identities=15% Similarity=0.311 Sum_probs=59.2
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHcCCCC--CHH-----HHHHHHHHhCCCCCCcccHHHHHHHHHhCCCCC
Q 008009 457 ILRAYTSLCLSKSGTLQKSEILASLKNAGLPA--NEE-----NAVAMMRFLNADTEESISYGHFRNFMVLLPSDR 524 (581)
Q Consensus 457 Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~l--See-----el~~Lf~~lD~d~DGkIs~eEF~~~lll~Ps~~ 524 (581)
..-+|+.||.+.+|.++..+|+--|+.+|+++ -++ +++++|..+|++.+|+|+..+|..||...-.+.
T Consensus 2255 Fs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeN 2329 (2399)
T KOG0040|consen 2255 FSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETEN 2329 (2399)
T ss_pred HHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhccccc
Confidence 44579999999999999999999999998766 233 799999999999999999999999999764443
No 101
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=94.98 E-value=0.056 Score=60.11 Aligned_cols=65 Identities=17% Similarity=0.322 Sum_probs=57.0
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCC---CHHHHHHHHHHhCCCCCCcccHHHHHHHHHhC
Q 008009 455 PTILRAYTSLCLSKSGTLQKSEILASLKNAGLPA---NEENAVAMMRFLNADTEESISYGHFRNFMVLL 520 (581)
Q Consensus 455 e~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~l---Seeel~~Lf~~lD~d~DGkIs~eEF~~~lll~ 520 (581)
..++..|..+| |++|+|+..|+..++...+... ..++++.++...+.|.+|+|+|+||+..++-.
T Consensus 19 ~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l 86 (627)
T KOG0046|consen 19 RELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNL 86 (627)
T ss_pred HHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence 45778899999 9999999999999999876544 57889999999999999999999999977644
No 102
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion]
Probab=94.90 E-value=0.0062 Score=62.27 Aligned_cols=30 Identities=27% Similarity=0.365 Sum_probs=28.1
Q ss_pred chhhhhhhchhhhhhhccccCccccccCCC
Q 008009 552 SVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 552 ~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.||.+|++|-+||+.|..+++||||||||+
T Consensus 210 vF~~sF~agl~~gs~sa~~vtPlDVvKTRi 239 (304)
T KOG0750|consen 210 VFYQSFLAGLVAGSASAIVVTPLDVVKTRI 239 (304)
T ss_pred hhHHHHHHHHHhhhhhhhhcccHHHHHHHH
Confidence 378889999999999999999999999995
No 103
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion]
Probab=94.87 E-value=0.0062 Score=63.98 Aligned_cols=28 Identities=36% Similarity=0.618 Sum_probs=27.0
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
|++.+.|++||+++..+|-||||||||+
T Consensus 228 ~e~a~~Ga~AG~itA~lTTPlDViKTRi 255 (323)
T KOG0768|consen 228 LEGALCGALAGGITAALTTPLDVIKTRI 255 (323)
T ss_pred HHHHHHHHHhhhHHhhcCChHHHHHHHH
Confidence 8899999999999999999999999995
No 104
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion]
Probab=94.64 E-value=0.0081 Score=63.19 Aligned_cols=28 Identities=18% Similarity=0.242 Sum_probs=25.6
Q ss_pred hhhhhhhchhhhhhhccccCccccccCC
Q 008009 553 VLKSALAGGLSCALSTSLMHPVDTIKAN 580 (581)
Q Consensus 553 ~~k~fLAGGiAGAvSrT~taPLDrlKTR 580 (581)
+.-.|+||+|||+|+..+|.|+||+|||
T Consensus 262 f~~sF~sG~iaGtvAAi~T~PfDV~KT~ 289 (361)
T KOG0761|consen 262 FGASFVSGFIAGTVAAIATCPFDVVKTR 289 (361)
T ss_pred eeeeehhhhHHHHHHHHHcCCchhhhHH
Confidence 3445999999999999999999999997
No 105
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion]
Probab=94.46 E-value=0.0076 Score=61.95 Aligned_cols=30 Identities=33% Similarity=0.483 Sum_probs=27.2
Q ss_pred chhhhhhhchhhhhhhccccCccccccCCC
Q 008009 552 SVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 552 ~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.+.-+.++||+||+++.++|-|||+|||++
T Consensus 201 ~p~ih~i~GalaGa~Aaa~TTPLDvvKT~L 230 (302)
T KOG0760|consen 201 NPLIHIIAGALAGALAAALTTPLDVVKTLL 230 (302)
T ss_pred CcHHHHHhhhhhHHHHHHhCCcHHHHHHHH
Confidence 357789999999999999999999999973
No 106
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.42 E-value=0.052 Score=34.47 Aligned_cols=27 Identities=26% Similarity=0.635 Sum_probs=22.5
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHH
Q 008009 391 GRRFFEELDRDGDGQVNLEDLEIAMRK 417 (581)
Q Consensus 391 Lr~lF~~~D~d~dG~Is~eEf~~~L~~ 417 (581)
++.+|+.+|.+++|.|+..||..++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 567888889988899999998888764
No 107
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=94.40 E-value=0.098 Score=44.10 Aligned_cols=62 Identities=15% Similarity=0.263 Sum_probs=51.9
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHc-CC-CCCHHHHHHHHHHhCCC----CCCcccHHHHHHHHHh
Q 008009 457 ILRAYTSLCLSKSGTLQKSEILASLKNA-GL-PANEENAVAMMRFLNAD----TEESISYGHFRNFMVL 519 (581)
Q Consensus 457 Lr~aFk~~D~DgdG~Is~eEf~~vLk~l-G~-~lSeeel~~Lf~~lD~d----~DGkIs~eEF~~~lll 519 (581)
+..+|..|-. +.+.|+.++|..+|+.. +. .++.+++..++..+..+ ..+.+++++|.+||.-
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S 69 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFS 69 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHS
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCC
Confidence 6778999954 78999999999999866 33 56899999999998655 4789999999999973
No 108
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.18 E-value=0.066 Score=33.96 Aligned_cols=27 Identities=19% Similarity=0.214 Sum_probs=17.5
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHH
Q 008009 457 ILRAYTSLCLSKSGTLQKSEILASLKN 483 (581)
Q Consensus 457 Lr~aFk~~D~DgdG~Is~eEf~~vLk~ 483 (581)
++.+|+.+|.+++|.|+..||..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 345667777777777777776666543
No 109
>PTZ00168 mitochondrial carrier protein; Provisional
Probab=93.59 E-value=0.015 Score=59.53 Aligned_cols=28 Identities=11% Similarity=0.099 Sum_probs=25.6
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
...+++|++||+++..+++|+|+||||.
T Consensus 85 ~~~~~ag~~Ag~~a~~~~~P~dvvKtRl 112 (259)
T PTZ00168 85 NLYLISTSIAEITACIVRLPFEIVKQNM 112 (259)
T ss_pred HHHHHHHHHHHHhhheeeChHHHHHHHH
Confidence 4568999999999999999999999984
No 110
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=93.08 E-value=0.2 Score=55.97 Aligned_cols=60 Identities=25% Similarity=0.385 Sum_probs=52.2
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHcCC-----CHHHHHHHHHhhcCCCCCCCcchHHHHhhhc
Q 008009 390 EGRRFFEELDRDGDGQVNLEDLEIAMRKRKL-----PRRYAREFMRRTRSHLFSKSFGWKQFLSLME 451 (581)
Q Consensus 390 eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl-----~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~ 451 (581)
++++.|..+| |++|+|+..|+..++.+.+. ..++++.++...+.+ .+|+|+|+||+..+.
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~-~~g~v~fe~f~~~~~ 84 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVD-ADGRVEFEEFVGIFL 84 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCC-cCCccCHHHHHHHHH
Confidence 4556688999 99999999999999999863 358899999999999 899999999998554
No 111
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion]
Probab=93.00 E-value=0.024 Score=58.23 Aligned_cols=29 Identities=34% Similarity=0.583 Sum_probs=27.3
Q ss_pred hhhhhhhchhhhhhhccccCccccccCCC
Q 008009 553 VLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 553 ~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
+|.-|++|||+||++-.+++|||.||||.
T Consensus 32 vwh~~~~GGIgGa~gd~~MHslDTvKTRq 60 (353)
T KOG0770|consen 32 VWHEFLWGGIGGAFGDGMMHSLDTVKTRQ 60 (353)
T ss_pred hhhhheecccccccccccccchhHHHHHH
Confidence 58889999999999999999999999993
No 112
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion]
Probab=92.98 E-value=0.021 Score=58.05 Aligned_cols=27 Identities=26% Similarity=0.266 Sum_probs=24.9
Q ss_pred hhhhhchhhhhhhccccCccccccCCC
Q 008009 555 KSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 555 k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.-++|||.||++|=.+.||+|+||||.
T Consensus 203 ~lL~AGG~aGm~SWla~Yp~DVVKtrl 229 (311)
T KOG0762|consen 203 TLLVAGGTAGMASWLACYPLDVVKTRL 229 (311)
T ss_pred hhhhhcchhhHHHHHHhccHHHHHHHH
Confidence 348999999999999999999999984
No 113
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional
Probab=92.90 E-value=0.019 Score=59.72 Aligned_cols=28 Identities=29% Similarity=0.348 Sum_probs=26.1
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
+..+++|++||+++.++++|+|+||||.
T Consensus 114 ~~~~~aG~~ag~~~~~~~~P~d~vk~r~ 141 (300)
T PTZ00169 114 GVNILSGGLAGASSLLIVYPLDFARTRL 141 (300)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 5679999999999999999999999984
No 114
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=92.86 E-value=0.22 Score=41.96 Aligned_cols=63 Identities=13% Similarity=0.227 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHcC----CCHHHHHHHHHhhcCCC---CCCCcchHHHHhhhccc
Q 008009 390 EGRRFFEELDRDGDGQVNLEDLEIAMRKRK----LPRRYAREFMRRTRSHL---FSKSFGWKQFLSLMEQK 453 (581)
Q Consensus 390 eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg----l~~eel~~Lf~~~D~d~---gDG~IsfeEF~~~L~~~ 453 (581)
+|+.+|..+-. +.+.|+.++|..+|+.-. ++.+++..++..+..+. ..+.++++.|..+|...
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD 70 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence 57889999955 789999999999998762 57889999999986541 36788888888877543
No 115
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=92.38 E-value=0.22 Score=52.75 Aligned_cols=96 Identities=7% Similarity=-0.030 Sum_probs=78.9
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHc-C--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc----hhHHHHHH
Q 008009 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKR-K--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK----EPTILRAY 461 (581)
Q Consensus 389 ~eLr~lF~~~D~d~dG~Is~eEf~~~L~~l-g--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~----ee~Lr~aF 461 (581)
..++..|..||.+++|.+++-|-...+.-+ + .++.-++-.|++|+.. .||.++-.+|..+++.. .-.+.-+|
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~-eDg~~ge~~ls~ilq~~lgv~~l~v~~lf 337 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVA-EDGISGEHILSLILQVVLGVEVLRVPVLF 337 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccc-cccccchHHHHHHHHHhcCcceeeccccc
Confidence 457889999999999999998877666554 3 4568889999999999 79999998888776643 33456789
Q ss_pred HHHcCCCCCcccHHHHHHHHHHcC
Q 008009 462 TSLCLSKSGTLQKSEILASLKNAG 485 (581)
Q Consensus 462 k~~D~DgdG~Is~eEf~~vLk~lG 485 (581)
..++...+|.|+.++|+.+....+
T Consensus 338 ~~i~q~d~~ki~~~~f~~fa~~~p 361 (412)
T KOG4666|consen 338 PSIEQKDDPKIYASNFRKFAATEP 361 (412)
T ss_pred hhhhcccCcceeHHHHHHHHHhCc
Confidence 999999999999999999886654
No 116
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion]
Probab=91.28 E-value=0.049 Score=56.05 Aligned_cols=29 Identities=28% Similarity=0.523 Sum_probs=26.8
Q ss_pred hhhhhhhchhhhhhhccccCccccccCCC
Q 008009 553 VLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 553 ~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
..+.++.||+||+.+.-.|.|||++|||+
T Consensus 235 ~~~elvtG~lAGglag~lTTPlDVvKTRl 263 (353)
T KOG0770|consen 235 SIEELVTGGLAGGLAGYLTTPLDVVKTRL 263 (353)
T ss_pred cHHHHHhhhccccccceecCcHHHHHHHH
Confidence 47779999999999999999999999994
No 117
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional
Probab=90.82 E-value=0.047 Score=56.80 Aligned_cols=28 Identities=18% Similarity=0.148 Sum_probs=24.6
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
+..+++|++||+++.+++||+|+||||+
T Consensus 211 ~~~~~~~~~~g~~a~~~t~P~dvvktRl 238 (300)
T PTZ00169 211 LYKWAVAQTVTILAGLISYPFDTVRRRM 238 (300)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHHH
Confidence 4457888999999999999999999984
No 118
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion]
Probab=90.79 E-value=0.063 Score=56.10 Aligned_cols=28 Identities=29% Similarity=0.438 Sum_probs=26.5
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
|..+++|.+||++|...+.|||+||||+
T Consensus 210 ~~~~~~gaiaGa~sv~~~~PiDvvktRM 237 (299)
T KOG0756|consen 210 LSSGISGAIAGAASVFGTQPIDVVKTRM 237 (299)
T ss_pred hhhhhhhhhccccccccCCCcHHHHHHh
Confidence 7779999999999999999999999995
No 119
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=89.90 E-value=3 Score=40.79 Aligned_cols=95 Identities=14% Similarity=0.074 Sum_probs=58.6
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHH--HHHHHhhcCC--CCCCCcchHHHHhhhccc------------
Q 008009 390 EGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYA--REFMRRTRSH--LFSKSFGWKQFLSLMEQK------------ 453 (581)
Q Consensus 390 eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel--~~Lf~~~D~d--~gDG~IsfeEF~~~L~~~------------ 453 (581)
.|++-...+|+|+||.|.+-|--..++.+|+..-.. ..++-..-.. ...+.+.---|..++...
T Consensus 8 ~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~Y 87 (174)
T PF05042_consen 8 VLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGAY 87 (174)
T ss_pred HHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCcccc
Confidence 445555679999999999999999999998665221 1111111000 011111111111122111
Q ss_pred -------hhHHHHHHHHHcCCCCCcccHHHHHHHHHHc
Q 008009 454 -------EPTILRAYTSLCLSKSGTLQKSEILASLKNA 484 (581)
Q Consensus 454 -------ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~l 484 (581)
..+...+|..++..+.+.||..|+..+++.-
T Consensus 88 D~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~n 125 (174)
T PF05042_consen 88 DTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGN 125 (174)
T ss_pred ccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhc
Confidence 4668889999998888899999999998763
No 120
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=89.33 E-value=1.6 Score=52.08 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=72.1
Q ss_pred ccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHH-------HHHHHHHhhcCCCCCCCcchHHHHhhhccc-----
Q 008009 386 YTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRR-------YAREFMRRTRSHLFSKSFGWKQFLSLMEQK----- 453 (581)
Q Consensus 386 ~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~e-------el~~Lf~~~D~d~gDG~IsfeEF~~~L~~~----- 453 (581)
|-..+++.+|..+|+...|.+++++|..+|..+|...+ +...++...|.+ .-|.++|.+|...|...
T Consensus 744 ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l-~~~qv~~~e~~ddl~R~~e~l~ 822 (890)
T KOG0035|consen 744 YVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPL-IQGQVQLLEFEDDLEREYEDLD 822 (890)
T ss_pred HHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcc-cccceeHHHHHhHhhhhhhhhc
Confidence 44578999999999999999999999999999986432 233455555666 56899999999988865
Q ss_pred -hhHHHHHHHHHcCCCCCcccHHHHHH
Q 008009 454 -EPTILRAYTSLCLSKSGTLQKSEILA 479 (581)
Q Consensus 454 -ee~Lr~aFk~~D~DgdG~Is~eEf~~ 479 (581)
..++-.+|..+-++.. +|..+|+..
T Consensus 823 ~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 823 TELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred HHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 5566777888866665 888998877
No 121
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion]
Probab=89.14 E-value=0.093 Score=54.81 Aligned_cols=29 Identities=31% Similarity=0.342 Sum_probs=26.9
Q ss_pred hhhhhhhchhhhhhhccccCccccccCCC
Q 008009 553 VLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 553 ~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.|...+|||+||+..=.+++|+|+||+|+
T Consensus 209 ~~~~~~aGg~aG~a~W~~v~P~DvvKS~i 237 (297)
T KOG0758|consen 209 TWKLLLAGGLAGIAFWLAVFPFDVVKSRL 237 (297)
T ss_pred hHHHHHhhhHHHHhhHhhhccHHHHHHHH
Confidence 37889999999999999999999999984
No 122
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion]
Probab=88.41 E-value=0.19 Score=52.56 Aligned_cols=30 Identities=30% Similarity=0.433 Sum_probs=27.7
Q ss_pred chhhhhhhchhhhhhhccccCccccccCCC
Q 008009 552 SVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 552 ~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
..|+.+++|..|||+++++..|-|+||+|+
T Consensus 123 ~l~~~~l~G~taGaia~~~AnPtDlVKVrm 152 (317)
T KOG0753|consen 123 PLWKSILCGVTAGAIAQALANPTDLVKVRM 152 (317)
T ss_pred cHHHHHHHHHhhhHHHHHhcCccceEEEEe
Confidence 358889999999999999999999999984
No 123
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=87.91 E-value=3 Score=46.61 Aligned_cols=72 Identities=13% Similarity=0.150 Sum_probs=58.5
Q ss_pred cccccccccHHHH---HHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhc
Q 008009 379 SVQDFFRYTEAEG---RRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLME 451 (581)
Q Consensus 379 s~~~~~~~te~eL---r~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~ 451 (581)
...+..++++++- -.-|+.+-.|-+|+|+-.--+.++.+..++-+++..|+...|.+ .||-+++.||+..|.
T Consensus 218 ~~d~pw~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKSklpi~ELshIWeLsD~d-~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 218 ELDTPWQITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKSKLPIEELSHIWELSDVD-RDGALTLSEFCAAFH 292 (737)
T ss_pred ccCCccccCHHHHHHHHhhhhcccCCcccccccHHHHhhhhhccCchHHHHHHHhhcccC-ccccccHHHHHhhHh
Confidence 3344455554433 33366777899999999999999999999999999999999999 899999999998654
No 124
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion]
Probab=87.68 E-value=0.11 Score=53.97 Aligned_cols=29 Identities=38% Similarity=0.556 Sum_probs=26.4
Q ss_pred hhhhhhhchhhhhhhccccCccccccCCC
Q 008009 553 VLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 553 ~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.+-+.++|.+||++|..+|.|||++|||+
T Consensus 246 l~vQavsg~lag~tsti~TnPlD~irtRL 274 (333)
T KOG0765|consen 246 LFVQAVSGALAGATSTILTNPLDTIRTRL 274 (333)
T ss_pred eeeeehhhhhhhhhHHHhcCcHHHHHHHH
Confidence 45568999999999999999999999995
No 125
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.64 E-value=1.2 Score=40.97 Aligned_cols=61 Identities=13% Similarity=0.141 Sum_probs=41.6
Q ss_pred cHHHHH-HHHHHHcCCCCCcccHHHHHHHHHHc------C------CCHHHHHHHHHh----hcCCCCCCCcchHHHHh
Q 008009 387 TEAEGR-RFFEELDRDGDGQVNLEDLEIAMRKR------K------LPRRYAREFMRR----TRSHLFSKSFGWKQFLS 448 (581)
Q Consensus 387 te~eLr-~lF~~~D~d~dG~Is~eEf~~~L~~l------g------l~~eel~~Lf~~----~D~d~gDG~IsfeEF~~ 448 (581)
++++++ ..|+..|-|++|.|+--|+..++... | .++.++..++.. -|.| +||.|+|.||..
T Consensus 64 tpeqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN-~DG~IDYgEflK 141 (144)
T KOG4065|consen 64 TPEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFN-GDGVIDYGEFLK 141 (144)
T ss_pred CHHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccC-CCceeeHHHHHh
Confidence 334443 46888999999999999999998765 2 123444444443 3556 788888888765
No 126
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=84.08 E-value=4.7 Score=46.15 Aligned_cols=127 Identities=13% Similarity=0.126 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHc-C--CCHHHHHHHHHhhcCCC----CCCCcchHHHHhhhccc-------
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKR-K--LPRRYAREFMRRTRSHL----FSKSFGWKQFLSLMEQK------- 453 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~l-g--l~~eel~~Lf~~~D~d~----gDG~IsfeEF~~~L~~~------- 453 (581)
...+.++|..-|.|.||.++-.|+..+=... + +...++..+-...+... .+..++..-|+-+-...
T Consensus 194 v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfiergr~E 273 (625)
T KOG1707|consen 194 VKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLFIERGRHE 273 (625)
T ss_pred HHHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHhcccc
Confidence 4567889999999999999999987664432 3 44444433333332211 12233333333221100
Q ss_pred ----------------------------------------hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCC-CHHH
Q 008009 454 ----------------------------------------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPA-NEEN 492 (581)
Q Consensus 454 ----------------------------------------ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~l-Seee 492 (581)
-.-+..+|..||.|+||.++.+|+..+....+... +...
T Consensus 274 ttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~~~~ 353 (625)
T KOG1707|consen 274 TTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWTSSP 353 (625)
T ss_pred chhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCCCCc
Confidence 23467789999999999999999999998874221 1000
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHH
Q 008009 493 AVAMMRFLNADTEESISYGHFRNFM 517 (581)
Q Consensus 493 l~~Lf~~lD~d~DGkIs~eEF~~~l 517 (581)
... .--.+..|.++|+-|+..-
T Consensus 354 ~~~---~t~~~~~G~ltl~g~l~~W 375 (625)
T KOG1707|consen 354 YKD---STVKNERGWLTLNGFLSQW 375 (625)
T ss_pred ccc---cceecccceeehhhHHHHH
Confidence 000 0012367888888886543
No 127
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion]
Probab=83.48 E-value=0.3 Score=49.86 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=28.2
Q ss_pred cchhhhhhhchhhhhhhccccCccccccCCC
Q 008009 551 GSVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 551 g~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.++..+|++|.+|||+-..+.+|+|++|||+
T Consensus 102 dS~~s~fl~G~aaGa~Q~vi~aPmEl~K~rL 132 (311)
T KOG0762|consen 102 DSYTSHFLGGVAAGAAQSVICAPMELIKTRL 132 (311)
T ss_pred CcHHHHHHHHHHHhhhhhhhcchHHHHHHHH
Confidence 3568889999999999999999999999995
No 128
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=82.62 E-value=7.3 Score=34.20 Aligned_cols=66 Identities=12% Similarity=0.236 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHc-------C----CCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCCC
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNA-------G----LPANEENAVAMMRFLNADTEESISYGHFRNFMVLLPS 522 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~l-------G----~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~Ps 522 (581)
.++.+.+|+.+ .|++|.++...|..+|+.+ | ..-.+..++..|+.. .....|+.++|++++...|.
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~ePq 78 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMSEPQ 78 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT--T
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHhCCC
Confidence 36788899999 5899999999999888753 2 111566677777765 35678999999999998875
No 129
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion]
Probab=81.71 E-value=0.42 Score=49.46 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=24.9
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
...+.+||.|||+|--++||||-.+||+
T Consensus 116 agnlaSGgaaGatsL~fVYpLDfarTRL 143 (298)
T KOG0749|consen 116 AGNLASGGAAGATSLCFVYPLDFARTRL 143 (298)
T ss_pred HhccCCccccCceeEEEEeccchhhHHH
Confidence 3448889999999999999999999985
No 130
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=81.18 E-value=2.2 Score=47.57 Aligned_cols=65 Identities=11% Similarity=0.176 Sum_probs=55.3
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhC
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLL 520 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~ 520 (581)
.+....-|+.+..|-.|+|+-.--+.++..-.+ .-+++.+|++..|.|.||-+++.||+..|.+.
T Consensus 230 ReYYvnQFrtvQpDp~gfisGsaAknFFtKSkl--pi~ELshIWeLsD~d~DGALtL~EFcAAfHLV 294 (737)
T KOG1955|consen 230 REYYVNQFRTVQPDPHGFISGSAAKNFFTKSKL--PIEELSHIWELSDVDRDGALTLSEFCAAFHLV 294 (737)
T ss_pred HHHHHhhhhcccCCcccccccHHHHhhhhhccC--chHHHHHHHhhcccCccccccHHHHHhhHhhe
Confidence 344555699999999999999988888876544 55889999999999999999999999988764
No 131
>PLN02952 phosphoinositide phospholipase C
Probab=80.72 E-value=6.6 Score=45.43 Aligned_cols=81 Identities=14% Similarity=0.211 Sum_probs=43.0
Q ss_pred CCCcchHHHHhhhccc-------hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcC--CCCCHHHHHHHHHHhC-------
Q 008009 438 SKSFGWKQFLSLMEQK-------EPTILRAYTSLCLSKSGTLQKSEILASLKNAG--LPANEENAVAMMRFLN------- 501 (581)
Q Consensus 438 DG~IsfeEF~~~L~~~-------ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG--~~lSeeel~~Lf~~lD------- 501 (581)
.|.++|.+|..+.... ...+..+|..|-. +.+.++.++|..+|.... ...+.+.+..++..+-
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~ 92 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVT 92 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhccccc
Confidence 3455666554433221 2455666666532 224566666666665542 1245555555544321
Q ss_pred CCCCCcccHHHHHHHHHh
Q 008009 502 ADTEESISYGHFRNFMVL 519 (581)
Q Consensus 502 ~d~DGkIs~eEF~~~lll 519 (581)
......++++.|..|+..
T Consensus 93 ~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 93 RYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred cccccCcCHHHHHHHHcC
Confidence 112345889999998873
No 132
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=80.68 E-value=1.9 Score=46.13 Aligned_cols=61 Identities=16% Similarity=0.085 Sum_probs=38.9
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 455 PTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 455 e~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
..+-.+|..+|.+.+|.|+..|++.+-.. -.+.-++.+|..-|...||.|+-+||...+..
T Consensus 250 ds~gWMFnklD~N~Dl~Ld~sEl~~I~ld----knE~CikpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 250 DSLGWMFNKLDTNYDLLLDQSELRAIELD----KNEACIKPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred hhhhhhhhccccccccccCHHHhhhhhcc----CchhHHHHHHhhhcccccCccccchhhhhhcc
Confidence 34556677777777777777776655322 23455666777777777777777777666553
No 133
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion]
Probab=79.20 E-value=0.69 Score=49.01 Aligned_cols=30 Identities=33% Similarity=0.505 Sum_probs=27.8
Q ss_pred chhhhhhhchhhhhhhccccCccccccCCC
Q 008009 552 SVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 552 ~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
..++.++||+.||++--+..+|||++|||.
T Consensus 53 ~~f~~l~ag~~ag~vv~~~L~pidtiktrl 82 (323)
T KOG0768|consen 53 TVFEALGAGGLAGVVVDLSLFPIDTIKTRL 82 (323)
T ss_pred HHHHHhhccCcceeEEeecccccchhhhhh
Confidence 358889999999999999999999999995
No 134
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion]
Probab=78.49 E-value=0.57 Score=47.37 Aligned_cols=28 Identities=29% Similarity=0.337 Sum_probs=25.0
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.-++..|-++|+.+.++|+|+|++|||.
T Consensus 214 ivN~~sgi~sg~lAt~vT~Pfd~iKTrm 241 (297)
T KOG0766|consen 214 IVNFSSGIFSGILATLVTQPFDVIKTRM 241 (297)
T ss_pred eeehhHHHHHHHHHHHhcCchhhhhhhh
Confidence 3458889999999999999999999994
No 135
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=76.81 E-value=2 Score=51.55 Aligned_cols=66 Identities=11% Similarity=0.139 Sum_probs=55.7
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCCC
Q 008009 455 PTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLPS 522 (581)
Q Consensus 455 e~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~Ps 522 (581)
.....+|...|.+.+|.|+..+....+... .++...+.++....|..+.|.+++.+|.-.+.++..
T Consensus 283 ~~~~~if~q~d~~~dG~I~s~~~~~~f~~~--gl~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~~ 348 (847)
T KOG0998|consen 283 QKYSKIFSQVDKDNDGSISSNEARNIFLPF--GLSKPRLAHVWLLADTQNTGTLSKDEFALAMHLLEQ 348 (847)
T ss_pred HHHHHHHHhccccCCCcccccccccccccC--CCChhhhhhhhhhcchhccCcccccccchhhhhhhh
Confidence 345668999999999999999999988774 457788999999999999999999999877766543
No 136
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=76.72 E-value=5.4 Score=42.90 Aligned_cols=95 Identities=14% Similarity=0.173 Sum_probs=62.9
Q ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHcC--CC---HHHHHHHHHhhcCCCCCCCcchHHHHhhhccc-hhHHHHHHHH
Q 008009 390 EGRRFFEELDRDGDGQVNLEDLEIAMRKRK--LP---RRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK-EPTILRAYTS 463 (581)
Q Consensus 390 eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg--l~---~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~-ee~Lr~aFk~ 463 (581)
+|+..|+.+-.+.++.....-+..+-..+. +. ..++-=||+.+|.| .|+.++-.|...+-... +.-++..|..
T Consensus 212 RL~dWF~~lhe~s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N-~Dl~Ld~sEl~~I~ldknE~CikpFfns 290 (434)
T KOG3555|consen 212 RLRDWFKALHEDSSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTN-YDLLLDQSELRAIELDKNEACIKPFFNS 290 (434)
T ss_pred HHHHHHHHHHhhhhccCcchhhcccccccccccCcchhhhhhhhhhccccc-cccccCHHHhhhhhccCchhHHHHHHhh
Confidence 455677777666666555555544433332 11 25667788888888 78888888877644433 6667778888
Q ss_pred HcCCCCCcccHHHHHHHHHHcC
Q 008009 464 LCLSKSGTLQKSEILASLKNAG 485 (581)
Q Consensus 464 ~D~DgdG~Is~eEf~~vLk~lG 485 (581)
-|...+|.|+..|+-.-+..-+
T Consensus 291 CD~~kDg~iS~~EWC~CF~k~~ 312 (434)
T KOG3555|consen 291 CDTYKDGSISTNEWCYCFQKSD 312 (434)
T ss_pred hcccccCccccchhhhhhccCC
Confidence 8888888888888776665544
No 137
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=76.58 E-value=13 Score=43.86 Aligned_cols=94 Identities=14% Similarity=0.200 Sum_probs=71.0
Q ss_pred HHHHHHHHHhhcCCCCCCCcchHHHHhhhccc-----hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHH
Q 008009 422 RRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK-----EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAM 496 (581)
Q Consensus 422 ~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~-----ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~L 496 (581)
..++..+|...|.+ .+|.+++.+-..++... ...++..|+..|..+++.+...++..+........ ++..+
T Consensus 135 ~~wi~~~~~~ad~~-~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rp---ev~~~ 210 (746)
T KOG0169|consen 135 EHWIHSIFQEADKN-KNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRP---EVYFL 210 (746)
T ss_pred HHHHHHHHHHHccc-cccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCc---hHHHH
Confidence 35778999999999 89999999988876654 56788899999999999999999999887765433 55566
Q ss_pred HHHhCCCCCCcccHHHHHHHHHhC
Q 008009 497 MRFLNADTEESISYGHFRNFMVLL 520 (581)
Q Consensus 497 f~~lD~d~DGkIs~eEF~~~lll~ 520 (581)
|..+-.+ .+.++.++.+.|+...
T Consensus 211 f~~~s~~-~~~ls~~~L~~Fl~~~ 233 (746)
T KOG0169|consen 211 FVQYSHG-KEYLSTDDLLRFLEEE 233 (746)
T ss_pred HHHHhCC-CCccCHHHHHHHHHHh
Confidence 6555433 5666666666665544
No 138
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=76.56 E-value=11 Score=36.09 Aligned_cols=63 Identities=10% Similarity=0.179 Sum_probs=47.6
Q ss_pred HHHHHHH---cCCCCCcccHHHHHHHHHHcC---CCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhC
Q 008009 458 LRAYTSL---CLSKSGTLQKSEILASLKNAG---LPANEENAVAMMRFLNADTEESISYGHFRNFMVLL 520 (581)
Q Consensus 458 r~aFk~~---D~DgdG~Is~eEf~~vLk~lG---~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~ 520 (581)
+.+|..| -..+...++...|..+++..+ -.++...++-+|..+-..+..+|+|++|+.+|...
T Consensus 2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~l 70 (154)
T PF05517_consen 2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAEL 70 (154)
T ss_dssp HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 3455555 356667899999999999875 35788999999999877777789999999988754
No 139
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=76.07 E-value=2 Score=45.83 Aligned_cols=60 Identities=15% Similarity=0.403 Sum_probs=46.6
Q ss_pred HHHHHHHcCCCCCcccHHHH---HHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhcc
Q 008009 392 RRFFEELDRDGDGQVNLEDL---EIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 392 r~lF~~~D~d~dG~Is~eEf---~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~ 452 (581)
.-.|..+|.|+++.|...|+ +.++.+..-+..=.+.+++..|.| +|..|++.|+..-+..
T Consensus 336 ~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlN-kDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 336 HWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLN-KDKKISLDEWRGCLGV 398 (421)
T ss_pred eeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccC-CCceecHHHHhhhhcc
Confidence 34488999999999999985 555555455566677888889999 8999999998876653
No 140
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=75.12 E-value=11 Score=46.90 Aligned_cols=58 Identities=10% Similarity=0.226 Sum_probs=50.1
Q ss_pred HHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHH
Q 008009 459 RAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFM 517 (581)
Q Consensus 459 ~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~l 517 (581)
..|+.||.||.|.|+..||..++.... ..+..+++-++.....|.....+|++|++-+
T Consensus 4061 dtfkeydpdgkgiiskkdf~kame~~k-~ytqse~dfllscae~dend~~~y~dfv~rf 4118 (5019)
T KOG2243|consen 4061 DTFKEYDPDGKGIISKKDFHKAMEGHK-HYTQSEIDFLLSCAEADENDMFDYEDFVDRF 4118 (5019)
T ss_pred ccchhcCCCCCccccHHHHHHHHhccc-cchhHHHHHHHHhhccCccccccHHHHHHHh
Confidence 468899999999999999999997643 4577889999999999999999999998644
No 141
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion]
Probab=73.60 E-value=0.86 Score=47.46 Aligned_cols=30 Identities=20% Similarity=0.371 Sum_probs=26.9
Q ss_pred chhhhhhhchhhhhhhccccCccccccCCC
Q 008009 552 SVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 552 ~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.+.-||+|-.+||.++.+++.|+|++|||.
T Consensus 196 ~~~tH~~aS~~aG~vatv~s~PlDv~KTr~ 225 (286)
T KOG0759|consen 196 GILTHFIASMIAGLVATVISQPLDVLKTRI 225 (286)
T ss_pred chHHHHHHHHHHHHHHHHhcChHHHHHHHH
Confidence 357789999999999999999999999984
No 142
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=73.60 E-value=1.6 Score=36.41 Aligned_cols=53 Identities=17% Similarity=0.229 Sum_probs=38.2
Q ss_pred hHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCC-------CCcccHHHHHH
Q 008009 455 PTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADT-------EESISYGHFRN 515 (581)
Q Consensus 455 e~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~-------DGkIs~eEF~~ 515 (581)
+++..+|+.+ .++.++||.+||++.|. +++++.+++.|.... .|..+|..|.+
T Consensus 6 eqv~~aFr~l-A~~KpyVT~~dLr~~l~-------pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~ 65 (69)
T PF08726_consen 6 EQVEEAFRAL-AGGKPYVTEEDLRRSLT-------PEQAEYCISRMPPYEGPDGDAIPGAYDYESFTN 65 (69)
T ss_dssp HHHHHHHHHH-CTSSSCEEHHHHHHHS--------CCCHHHHHCCSEC--SSS----TTEEECHHHHC
T ss_pred HHHHHHHHHH-HcCCCcccHHHHHHHcC-------cHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHH
Confidence 6788999999 78889999999998863 344555666554433 26688888874
No 143
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=73.38 E-value=5.2 Score=45.61 Aligned_cols=65 Identities=12% Similarity=0.146 Sum_probs=59.2
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCC
Q 008009 457 ILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLP 521 (581)
Q Consensus 457 Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~P 521 (581)
.+.-|..+|.|+.|+++.+++.++|+..+..++++.+..+++..|.+..|.+...||.+++...-
T Consensus 595 ~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 595 RKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 34569999999999999999999999999899999999999999999999999999999887553
No 144
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=72.92 E-value=2.5 Score=45.01 Aligned_cols=64 Identities=9% Similarity=0.190 Sum_probs=50.1
Q ss_pred HHHHHHHHcCCCCCcccHHHHHHH---HHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhCCC
Q 008009 457 ILRAYTSLCLSKSGTLQKSEILAS---LKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMVLLPS 522 (581)
Q Consensus 457 Lr~aFk~~D~DgdG~Is~eEf~~v---Lk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~Ps 522 (581)
+..-|..+|.|.++.|...|++-+ +..-.. ...-...++++-|.|+|.+|++.||+..+...+.
T Consensus 335 v~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~--~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~~~ 401 (421)
T KOG4578|consen 335 VHWYFNQLDKNSNNDIERREWKPFKRVLLKKSK--PRKCSRKFFKYCDLNKDKKISLDEWRGCLGVEKE 401 (421)
T ss_pred eeeeeeeecccccCccchhhcchHHHHHHhhcc--HHHHhhhcchhcccCCCceecHHHHhhhhccccc
Confidence 455699999999999999996544 433221 2344678999999999999999999999987664
No 145
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion]
Probab=72.46 E-value=0.72 Score=48.99 Aligned_cols=25 Identities=16% Similarity=0.477 Sum_probs=23.4
Q ss_pred hhhchhhhhhhccccCccccccCCC
Q 008009 557 ALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 557 fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
++||.+|-.++.|++||||++|||+
T Consensus 160 ~vaG~iAR~~A~TvvsPiEL~RTkm 184 (361)
T KOG0761|consen 160 LVAGAIARSLAVTVVSPIELARTKM 184 (361)
T ss_pred HHHHHhhhheeeEEechHHHHHHHH
Confidence 7899999999999999999999984
No 146
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=69.94 E-value=11 Score=40.09 Aligned_cols=60 Identities=17% Similarity=0.222 Sum_probs=40.8
Q ss_pred HHHHHHcCCCCCcccHHHHHHHHHHc-----CCCCCH--------HH---HHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 459 RAYTSLCLSKSGTLQKSEILASLKNA-----GLPANE--------EN---AVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 459 ~aFk~~D~DgdG~Is~eEf~~vLk~l-----G~~lSe--------ee---l~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
..|...|.+++|+++..|+..++... ...-.+ +. -+++|+.+|.|.|.-|+.+||++.--
T Consensus 248 TFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~ 323 (442)
T KOG3866|consen 248 TFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTD 323 (442)
T ss_pred hheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhh
Confidence 45777788888888887777665431 111111 11 24688999999999999999987654
No 147
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion]
Probab=69.86 E-value=1.8 Score=45.23 Aligned_cols=30 Identities=27% Similarity=0.264 Sum_probs=27.8
Q ss_pred chhhhhhhchhhhhhhccccCccccccCCC
Q 008009 552 SVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 552 ~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.+..++++++.|||++.++|.||=++|||+
T Consensus 104 ~~~~~l~sa~~AGa~t~~lTNPIWVvKTRL 133 (299)
T KOG0764|consen 104 SVLANLSSAAEAGAATTILTNPIWVVKTRL 133 (299)
T ss_pred hHHHHHHHHHhhhHHHHHhcCCeEEEeehh
Confidence 457789999999999999999999999995
No 148
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion]
Probab=67.91 E-value=1.9 Score=44.34 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=30.2
Q ss_pred cccCcchhhhhhhchhhhhhhccccCccccccCCC
Q 008009 547 EIPAGSVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 547 ~I~sg~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.-+....++.+++|++||.++...--|+|++|.|+
T Consensus 196 k~~~~~~~~~~i~g~l~gtla~~ln~pfDVaKsRI 230 (294)
T KOG0754|consen 196 KDKTLEIRRKLIIGALAGTLACVLNTPFDVAKSRI 230 (294)
T ss_pred cCcHHHHHHHHHHHHhhhhhhhhccChhHHhHhhc
Confidence 33444578899999999999999999999999985
No 149
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion]
Probab=67.84 E-value=1.4 Score=45.69 Aligned_cols=28 Identities=25% Similarity=0.382 Sum_probs=24.5
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
-+.++||++||..--.+|-|||+||++.
T Consensus 113 ~~gmlAG~laG~~qIvvttPmelLKIqm 140 (304)
T KOG0750|consen 113 GRGMLAGGLAGICQIVVTTPMELLKIQM 140 (304)
T ss_pred chhhhhccccceEEEEEeccHHHHHhhh
Confidence 3449999999999999999999999863
No 150
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=66.38 E-value=79 Score=38.31 Aligned_cols=121 Identities=12% Similarity=0.228 Sum_probs=82.4
Q ss_pred HcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCC-CCCCC-----cchHHHHhhhccc--hhHHHHHHHHHcCCCC
Q 008009 398 LDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSH-LFSKS-----FGWKQFLSLMEQK--EPTILRAYTSLCLSKS 469 (581)
Q Consensus 398 ~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d-~gDG~-----IsfeEF~~~L~~~--ee~Lr~aFk~~D~Dgd 469 (581)
+-.+..|+|-...+...+.+ +-+...++......-.. ..+.. .+++.|..++... ...+..+|..+-.+..
T Consensus 157 mqvn~~grip~knI~k~F~~-~k~~KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~klcpR~eie~iF~ki~~~~k 235 (1189)
T KOG1265|consen 157 MQVNFEGRIPVKNIIKTFSA-DKKEKRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNKLCPRPEIEEIFRKISGKKK 235 (1189)
T ss_pred hcccccccccHHHHHHHhhc-CCchhHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHhcCCchhHHHHHHHhccCCC
Confidence 44567788887777776655 21112232222222111 01222 4566666666544 4789999999988888
Q ss_pred CcccHHHHHHHHHHc----------CCCCCHHHHHHHHHHhCCCC----CCcccHHHHHHHHHh
Q 008009 470 GTLQKSEILASLKNA----------GLPANEENAVAMMRFLNADT----EESISYGHFRNFMVL 519 (581)
Q Consensus 470 G~Is~eEf~~vLk~l----------G~~lSeeel~~Lf~~lD~d~----DGkIs~eEF~~~lll 519 (581)
-|+|.++|..+|..- -..+++..+..+++.|..|. +|.++-+-|++++.-
T Consensus 236 pylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 236 PYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred ccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhC
Confidence 999999999999753 24567888999999998775 688999999998874
No 151
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=65.62 E-value=52 Score=34.28 Aligned_cols=128 Identities=15% Similarity=0.122 Sum_probs=73.3
Q ss_pred CCCcccHHHHH---HHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc---hhH-----HHHHHHHHcCCCCC
Q 008009 402 GDGQVNLEDLE---IAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK---EPT-----ILRAYTSLCLSKSG 470 (581)
Q Consensus 402 ~dG~Is~eEf~---~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~---ee~-----Lr~aFk~~D~DgdG 470 (581)
-||.++..|+. .++..++++.++.+.+...+... .....++.+|+..+... ... +..+|... --||
T Consensus 68 ADG~Vse~Ei~~~~~l~~~~~l~~~~r~~a~~lf~~~-k~~~~~l~~~~~~~~~~~~~r~~l~~~lL~~l~~vA--~ADG 144 (267)
T PRK09430 68 AKGRVTEADIRIASQLMDRMNLHGEARRAAQQAFREG-KEPDFPLREKLRQFRSVCGGRFDLLRMFLEIQIQAA--FADG 144 (267)
T ss_pred cCCCcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh-cccCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHH--HhcC
Confidence 47999999986 33444578877644444444443 44558899988866542 111 23344443 2347
Q ss_pred cccHHHHHHHHHHc--CCCCCHHHHHHHHHHhCC------CC--------CCcccHHHHHHHHHhCCCCCCccchHHHHH
Q 008009 471 TLQKSEILASLKNA--GLPANEENAVAMMRFLNA------DT--------EESISYGHFRNFMVLLPSDRLQDDPRSIWF 534 (581)
Q Consensus 471 ~Is~eEf~~vLk~l--G~~lSeeel~~Lf~~lD~------d~--------DGkIs~eEF~~~lll~Ps~~l~d~irs~W~ 534 (581)
.++..|-. +|+.+ .+.++..++..+...+.. .. +...++.++...+-..|..... .++..|+
T Consensus 145 ~l~~~E~~-~L~~Ia~~Lgis~~df~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ay~vLgv~~~as~~-eIk~aYr 222 (267)
T PRK09430 145 SLHPNERQ-VLYVIAEELGFSRFQFDQLLRMMQAGFRFQQQQGGGGYQQAQRGPTLEDAYKVLGVSESDDDQ-EIKRAYR 222 (267)
T ss_pred CCCHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHHHhhcccccccccccccCCCcHHhHHHHcCCCCCCCHH-HHHHHHH
Confidence 89999843 33333 245677777776665321 10 1135667777777766655433 3444453
No 152
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion]
Probab=65.39 E-value=1.7 Score=44.07 Aligned_cols=28 Identities=29% Similarity=0.436 Sum_probs=26.3
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.+-++|||++|+.--|++||.|+||.|+
T Consensus 217 v~tmlaG~vgGicLWtsv~PaDviKSRi 244 (301)
T KOG0763|consen 217 VRTMLAGGVGGICLWTSVFPADVIKSRI 244 (301)
T ss_pred HHHHhhcccceeEEEeeeccHHHHhhHh
Confidence 6779999999999999999999999985
No 153
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=65.18 E-value=7 Score=41.49 Aligned_cols=26 Identities=31% Similarity=0.532 Sum_probs=21.3
Q ss_pred HHHHHHHcCCCCCcccHHHHHHHHHH
Q 008009 392 RRFFEELDRDGDGQVNLEDLEIAMRK 417 (581)
Q Consensus 392 r~lF~~~D~d~dG~Is~eEf~~~L~~ 417 (581)
+.+|...|.|+||.++-.||.+++..
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLFtk 272 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALFTK 272 (442)
T ss_pred chheeeeccCCcccccHHHHHHHHHH
Confidence 35677888999999999999888765
No 154
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion]
Probab=64.72 E-value=2.7 Score=43.93 Aligned_cols=28 Identities=11% Similarity=0.103 Sum_probs=25.8
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.-|++|.+.||.+..|+|.||=+||||+
T Consensus 128 ~vHm~sAasAgf~tstatNPIWlVKTRl 155 (319)
T KOG0757|consen 128 QVHMMAAASAGFATSTATNPIWLVKTRL 155 (319)
T ss_pred hhHHHHHhhhHHHHhhccCceEEEeehh
Confidence 4578999999999999999999999995
No 155
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=64.42 E-value=13 Score=44.79 Aligned_cols=66 Identities=12% Similarity=0.073 Sum_probs=56.2
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCH-----HHHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANE-----ENAVAMMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSe-----eel~~Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
...++..|+.+|....|.++++++...|..+|....+ +++..++...|.+..|.++|.+|.++|..
T Consensus 746 ~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R 816 (890)
T KOG0035|consen 746 LDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLER 816 (890)
T ss_pred HHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhh
Confidence 4568889999999999999999999999999987764 34566777788888899999999998874
No 156
>cd08315 Death_TRAILR_DR4_DR5 Death domain of Tumor necrosis factor-Related Apoptosis-Inducing Ligand Receptors. Death Domain (DD) found in Tumor necrosis factor-Related Apoptosis-Inducing Ligand (TRAIL) Receptors. In mammals, this family includes TRAILR1 (also called DR4 or TNFRSF10A) and TRAILR2 (also called DR5, TNFRSF10B, or KILLER). They function as receptors for the cytokine TRAIL and are involved in apoptosis signaling pathways. TRAIL preferentially induces apoptosis in cancer cells while exhibiting little toxicity in normal cells. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=64.13 E-value=81 Score=27.82 Aligned_cols=89 Identities=15% Similarity=0.149 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccchhHHHHHHHHHcCC
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQKEPTILRAYTSLCLS 467 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ee~Lr~aFk~~D~D 467 (581)
.+.++..|..+= ..|...++..+++.+|+++.++..+-..+-. +. ++..+++..+=..
T Consensus 3 ~~~l~~~f~~i~----~~V~~~~Wk~laR~LGLse~~I~~i~~~~~~-------~~-----------eq~~qmL~~W~~~ 60 (96)
T cd08315 3 QETLRRSFDHFI----KEVPFDSWNRLMRQLGLSENEIDVAKANERV-------TR-----------EQLYQMLLTWVNK 60 (96)
T ss_pred HhHHHHHHHHHH----HHCCHHHHHHHHHHcCCCHHHHHHHHHHCCC-------CH-----------HHHHHHHHHHHHh
Confidence 356677776662 2477899999999999999988876544311 11 3344444444322
Q ss_pred CCCcccHHHHHHHHHHcCCCCCHHHHHHHHH
Q 008009 468 KSGTLQKSEILASLKNAGLPANEENAVAMMR 498 (581)
Q Consensus 468 gdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~ 498 (581)
.-..-+...+.++|..++....-+.+...+.
T Consensus 61 ~G~~At~~~L~~aL~~~~~~~~Ae~I~~~l~ 91 (96)
T cd08315 61 TGRKASVNTLLDALEAIGLRLAKESIQDELI 91 (96)
T ss_pred hCCCcHHHHHHHHHHHcccccHHHHHHHHHH
Confidence 2235678999999999998888777776554
No 157
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=62.82 E-value=9.9 Score=45.85 Aligned_cols=127 Identities=17% Similarity=0.202 Sum_probs=97.6
Q ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc---------------
Q 008009 389 AEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK--------------- 453 (581)
Q Consensus 389 ~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~--------------- 453 (581)
..+..+|+.+|...+|.|+..+-..++..-+++..-+-.++...|.. +-|..+..+|...+...
T Consensus 11 ~~~~~~~~~~d~~~~G~i~g~~a~~f~~~s~L~~qvl~qiws~~d~~-~~g~l~~q~f~~~lrlva~aq~~~~~~~~~~~ 89 (847)
T KOG0998|consen 11 PLFDQYFKSADPQGDGRITGAEAVAFLSKSGLPDQVLGQIWSLADSS-GKGFLNRQGFYAALRLVAQAQSGRELSAKKVL 89 (847)
T ss_pred chHHHhhhccCcccCCcccHHHhhhhhhccccchhhhhccccccccc-cCCccccccccccchHhhhhhcccCcCccccc
Confidence 35568899999999999999999999999899988888888888888 67888888887755422
Q ss_pred --------------------------------------hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHH
Q 008009 454 --------------------------------------EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVA 495 (581)
Q Consensus 454 --------------------------------------ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~ 495 (581)
......+|..+... +|.++.+-.+.+|..-+ +.-+.+..
T Consensus 90 ~~~~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~~~~qe~aky~q~f~s~~p~-~g~~sg~~~~pil~~s~--Lp~~~l~~ 166 (847)
T KOG0998|consen 90 PASAVPPPPKISHDTSPPSRPSSSTSAAPFVPAITPQEQAKYDQIFRSLSPS-NGLLSGDKAKPILLNSK--LPSDVLGR 166 (847)
T ss_pred cccCCCCCCccCccCCCcccCCCCCCCcccCCCCCHHHHHHHHHHHhccCCC-CCccccchhhhhhhcCC--CChhhhcc
Confidence 13345567777644 78888887777776543 34455667
Q ss_pred HHHHhCCCCCCcccHHHHHHHHHh
Q 008009 496 MMRFLNADTEESISYGHFRNFMVL 519 (581)
Q Consensus 496 Lf~~lD~d~DGkIs~eEF~~~lll 519 (581)
+....|.+.+|.++..||.-.|.+
T Consensus 167 iw~l~d~d~~g~Ld~~ef~~am~l 190 (847)
T KOG0998|consen 167 IWELSDIDKDGNLDRDEFAVAMHL 190 (847)
T ss_pred ccccccccccCCCChhhhhhhhhH
Confidence 788889999999999999765553
No 158
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=62.52 E-value=16 Score=34.60 Aligned_cols=53 Identities=13% Similarity=0.364 Sum_probs=32.5
Q ss_pred cccccHHHHHHHHHHHcCC-------CCCcccHHHHHHHHHHc---CCCHHHHHHHHHhhcCC
Q 008009 383 FFRYTEAEGRRFFEELDRD-------GDGQVNLEDLEIAMRKR---KLPRRYAREFMRRTRSH 435 (581)
Q Consensus 383 ~~~~te~eLr~lF~~~D~d-------~dG~Is~eEf~~~L~~l---gl~~eel~~Lf~~~D~d 435 (581)
+..|....++.+.++|..+ ..+.|+++.|+.+|+.. .+|.+.++.||..|-..
T Consensus 19 y~eys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~~ 81 (138)
T PF14513_consen 19 YSEYSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQKK 81 (138)
T ss_dssp HHHH----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS---
T ss_pred HHHHHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCc
Confidence 3446667778887777543 34689999999999876 58889999999988654
No 159
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion]
Probab=62.44 E-value=2.8 Score=43.13 Aligned_cols=28 Identities=25% Similarity=0.300 Sum_probs=25.4
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.-+.+||..||.+-..++.|+|+||+|.
T Consensus 107 ~t~~~aG~~ag~tEa~vV~PFEvvKirl 134 (294)
T KOG0754|consen 107 LTSILAGLSAGLTEAFVVNPFEVVKIRL 134 (294)
T ss_pred HHHHHhhhhhcchheeEecceeeEEeeh
Confidence 4558899999999999999999999984
No 160
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=62.03 E-value=21 Score=34.12 Aligned_cols=60 Identities=8% Similarity=0.254 Sum_probs=44.1
Q ss_pred HHHHHHH---cCCCCCcccHHHHHHHHHHcC-----CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhcc
Q 008009 392 RRFFEEL---DRDGDGQVNLEDLEIAMRKRK-----LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 392 r~lF~~~---D~d~dG~Is~eEf~~~L~~lg-----l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~ 452 (581)
+.+|..| ...+...++...|..+|+..+ ++...+..+|..+-.. +..+|+|++|+.+|..
T Consensus 2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k-~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAK-GARKITFEQFLEALAE 69 (154)
T ss_dssp HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-S-S-SEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcC-CCcccCHHHHHHHHHH
Confidence 3455544 445567899999999999986 4678889999998766 6777999999887653
No 161
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=61.18 E-value=8.5 Score=44.48 Aligned_cols=53 Identities=11% Similarity=0.150 Sum_probs=39.1
Q ss_pred HHHHHHHHhhcCCCCCCCcchHHHHhhhccc-----hhHHHHHHHHHcCCCCCcccHHHH
Q 008009 423 RYAREFMRRTRSHLFSKSFGWKQFLSLMEQK-----EPTILRAYTSLCLSKSGTLQKSEI 477 (581)
Q Consensus 423 eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~-----ee~Lr~aFk~~D~DgdG~Is~eEf 477 (581)
..++.+|+..|.+ .+|.++|.+|+..+... .+++.-.|+.+|.+++ ..+.+|.
T Consensus 555 ~~~~rlF~l~D~s-~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 555 IFLERLFRLLDDS-MTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHhcccC-CcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 4566778888877 78888888888766544 5667777888888877 7777776
No 162
>PLN02952 phosphoinositide phospholipase C
Probab=60.24 E-value=34 Score=39.79 Aligned_cols=78 Identities=14% Similarity=0.126 Sum_probs=49.5
Q ss_pred CCcccHHHHHHHHHHcC----CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc-------hhHHHHHHHHH-------
Q 008009 403 DGQVNLEDLEIAMRKRK----LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK-------EPTILRAYTSL------- 464 (581)
Q Consensus 403 dG~Is~eEf~~~L~~lg----l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~-------ee~Lr~aFk~~------- 464 (581)
.|.+++++|..+.+.+. .++.++..+|..+-.+ .+.++.++|..+|... .+....+|..+
T Consensus 14 ~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~--~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~ 91 (599)
T PLN02952 14 SGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVG--GGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHV 91 (599)
T ss_pred CCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCC--CCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccc
Confidence 47888888887777664 2567888888888544 4678888888877643 12233343322
Q ss_pred cCCCCCcccHHHHHHHHH
Q 008009 465 CLSKSGTLQKSEILASLK 482 (581)
Q Consensus 465 D~DgdG~Is~eEf~~vLk 482 (581)
...+.+.++.+.|..+|.
T Consensus 92 ~~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 92 TRYTRHGLNLDDFFHFLL 109 (599)
T ss_pred ccccccCcCHHHHHHHHc
Confidence 111234578888877774
No 163
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=60.04 E-value=29 Score=34.07 Aligned_cols=33 Identities=0% Similarity=-0.047 Sum_probs=27.3
Q ss_pred CCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhC
Q 008009 488 ANEENAVAMMRFLNADTEESISYGHFRNFMVLL 520 (581)
Q Consensus 488 lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~ 520 (581)
..++.+++||..++..+.+.+++.|..+++..+
T Consensus 93 Fvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~n 125 (174)
T PF05042_consen 93 FVPQKFEEIFSKYAKTGPDALTLRELWRMLKGN 125 (174)
T ss_pred CCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhc
Confidence 346778899999998888899999998888764
No 164
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion]
Probab=57.41 E-value=3.6 Score=43.28 Aligned_cols=28 Identities=29% Similarity=0.322 Sum_probs=25.8
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
...|+||.+||.++.-++.|.|+||+|+
T Consensus 109 ~q~~~aG~~aG~~~s~~~~P~E~iK~rL 136 (297)
T KOG0758|consen 109 PQYFIAGLVAGVVSSLLACPVELIKCRL 136 (297)
T ss_pred HHHHHhcccceeeeeeeccchhheeeee
Confidence 5569999999999999999999999985
No 165
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=57.10 E-value=43 Score=28.98 Aligned_cols=73 Identities=16% Similarity=0.153 Sum_probs=48.0
Q ss_pred CCcccHHHHHHHH---HH-cCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------hhHHHHHHHHHcCCCCCcc
Q 008009 403 DGQVNLEDLEIAM---RK-RKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------EPTILRAYTSLCLSKSGTL 472 (581)
Q Consensus 403 dG~Is~eEf~~~L---~~-lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------ee~Lr~aFk~~D~DgdG~I 472 (581)
||.++..|...+- .. ++++..+...++..+... .....++.+|...+... ..-+..++... --||.+
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r~~~l~~L~~vA--~ADG~~ 89 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEAL-EEEAPDLYEFTSLIKEHFDYEERLELVEALWEVA--YADGEL 89 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHH--HhcCCC
Confidence 7899999876554 44 478888888888777665 56678888888765542 22234445544 334677
Q ss_pred cHHHHH
Q 008009 473 QKSEIL 478 (581)
Q Consensus 473 s~eEf~ 478 (581)
+..|-.
T Consensus 90 ~~~E~~ 95 (104)
T cd07313 90 DEYEEH 95 (104)
T ss_pred CHHHHH
Confidence 777744
No 166
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=54.78 E-value=18 Score=41.46 Aligned_cols=71 Identities=15% Similarity=0.168 Sum_probs=57.6
Q ss_pred ccccccHHHHH---HHHHHHcCCCCCcccHHHHHHHHHHcC--CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc
Q 008009 382 DFFRYTEAEGR---RFFEELDRDGDGQVNLEDLEIAMRKRK--LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK 453 (581)
Q Consensus 382 ~~~~~te~eLr---~lF~~~D~d~dG~Is~eEf~~~L~~lg--l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ 453 (581)
..+.++.++++ .-|..+|.|+.|+++.++...+|...+ ++.+.+.++.+..|.+ -+|.+...||.++++..
T Consensus 583 ~~i~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~-~~g~v~l~e~~q~~s~~ 658 (680)
T KOG0042|consen 583 IPIKLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADEN-LNGFVELREFLQLMSAI 658 (680)
T ss_pred cccccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh-hcceeeHHHHHHHHHHH
Confidence 34555555554 448999999999999999999999875 7888888999999888 78999999998876643
No 167
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=53.44 E-value=16 Score=42.29 Aligned_cols=59 Identities=12% Similarity=0.102 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHH
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHF 513 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF 513 (581)
..-+.++|..+|.+++|.|+..+|..-|..+-.....+.+.-+++-+|.+.+ ..+.+|-
T Consensus 554 ~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 554 LIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 3447789999999999999999999888776544455678888999998888 7666654
No 168
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion]
Probab=53.36 E-value=4.3 Score=42.75 Aligned_cols=30 Identities=17% Similarity=0.173 Sum_probs=27.1
Q ss_pred chhhhhhhchhhhhhhccccCccccccCCC
Q 008009 552 SVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 552 ~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
.+.-||++.-.||.++..+--|.|+||||+
T Consensus 224 n~~~HfvSs~~AGl~aai~s~P~DVVKTRm 253 (317)
T KOG0753|consen 224 NIPTHFVSSFCAGLAAAILSSPVDVVKTRM 253 (317)
T ss_pred chHHHHHHHHHHHHHHHHhcCcHHHHHhhh
Confidence 456789999999999999999999999995
No 169
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=53.05 E-value=21 Score=41.81 Aligned_cols=82 Identities=13% Similarity=0.182 Sum_probs=59.3
Q ss_pred CCCcchHHHHhhhccchhHHHHHHHHHcCCCCCcccHHHHHHHHHHc--------CCCCCHHHHHHHHHHhCCCCCCccc
Q 008009 438 SKSFGWKQFLSLMEQKEPTILRAYTSLCLSKSGTLQKSEILASLKNA--------GLPANEENAVAMMRFLNADTEESIS 509 (581)
Q Consensus 438 DG~IsfeEF~~~L~~~ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~l--------G~~lSeeel~~Lf~~lD~d~DGkIs 509 (581)
++ ++++||...-...+..++..|..+|. ++|.++.+|+..++... ....+.+....+++..|.+..|.+.
T Consensus 2 ~~-~~~~~~~~~~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 79 (646)
T KOG0039|consen 2 EG-ISFQELKITDCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELDPDHKGYIT 79 (646)
T ss_pred CC-cchhhhcccCCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhccccccceee
Confidence 46 88888882222337888999999996 89999999998887643 1333455567788889999888887
Q ss_pred HHHHHHHHHhCC
Q 008009 510 YGHFRNFMVLLP 521 (581)
Q Consensus 510 ~eEF~~~lll~P 521 (581)
+.++..++...|
T Consensus 80 ~~~~~~ll~~~~ 91 (646)
T KOG0039|consen 80 NEDLEILLLQIP 91 (646)
T ss_pred ecchhHHHHhch
Confidence 777665555443
No 170
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only]
Probab=52.47 E-value=2.6 Score=42.07 Aligned_cols=30 Identities=27% Similarity=0.480 Sum_probs=27.3
Q ss_pred chhhhhhhchhhhhhhccccCccccccCCC
Q 008009 552 SVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 552 ~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
+...-|+|||+-||.--++..||.+||||+
T Consensus 210 hLv~DFiAG~LLGA~l~~~FFPi~VvKt~M 239 (297)
T KOG1519|consen 210 HLVNDFIAGGLLGAMLGFLFFPINVVKTRM 239 (297)
T ss_pred HHHHHHhhhhHHHHHHHHhhccHHHHHHHH
Confidence 557779999999999999999999999984
No 171
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=51.98 E-value=19 Score=44.82 Aligned_cols=58 Identities=21% Similarity=0.384 Sum_probs=48.8
Q ss_pred HHHHHcCCCCCcccHHHHHHHHHHcC-CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhcc
Q 008009 394 FFEELDRDGDGQVNLEDLEIAMRKRK-LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 394 lF~~~D~d~dG~Is~eEf~~~L~~lg-l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~ 452 (581)
.|+++|.|+.|.|+..||..++.... .+..++.-++.-...+ .+..++|++|+.-+..
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~~k~ytqse~dfllscae~d-end~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGHKHYTQSEIDFLLSCAEAD-ENDMFDYEDFVDRFHE 4120 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhccccchhHHHHHHHHhhccC-ccccccHHHHHHHhcC
Confidence 38899999999999999999998764 6778888777777777 7889999999986543
No 172
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=50.74 E-value=69 Score=28.19 Aligned_cols=29 Identities=21% Similarity=0.412 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHH
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRK 417 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~ 417 (581)
++.++.+|+.+ .|++|.++..-|..+|..
T Consensus 2 ~dKyRylFsli-sd~~g~~~~~~l~~lL~d 30 (90)
T PF09069_consen 2 EDKYRYLFSLI-SDSNGCMDQRKLGLLLHD 30 (90)
T ss_dssp HHHHHHHHHHH-S-TTS-B-HHHHHHHHHH
T ss_pred hHHHHHHHHHH-cCCCCCCcHHHHHHHHHH
Confidence 35788999988 788999999999998876
No 173
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=48.96 E-value=10 Score=31.73 Aligned_cols=57 Identities=18% Similarity=0.269 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCC------CCCCCcchHHHHhhh
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSH------LFSKSFGWKQFLSLM 450 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d------~gDG~IsfeEF~~~L 450 (581)
.+++.+.|+.+ .++.++||.+||+..|. +++++-+...+..- ...|.++|..|..-+
T Consensus 5 ~eqv~~aFr~l-A~~KpyVT~~dLr~~l~-----pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l 67 (69)
T PF08726_consen 5 AEQVEEAFRAL-AGGKPYVTEEDLRRSLT-----PEQAEYCISRMPPYEGPDGDAIPGAYDYESFTNSL 67 (69)
T ss_dssp CHHHHHHHHHH-CTSSSCEEHHHHHHHS------CCCHHHHHCCSEC--SSS----TTEEECHHHHCCC
T ss_pred HHHHHHHHHHH-HcCCCcccHHHHHHHcC-----cHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHHH
Confidence 46788999999 77789999999998764 33334444444332 123668888887643
No 174
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion]
Probab=47.72 E-value=6.2 Score=41.36 Aligned_cols=56 Identities=14% Similarity=0.224 Sum_probs=40.5
Q ss_pred HHHHHHHHHhCCCCCCccchHHHHHhcCeeecCCCCccccCcchhhhhhhchhhhhhhccccCccccccCCC
Q 008009 510 YGHFRNFMVLLPSDRLQDDPRSIWFEAATVVAVPPPVEIPAGSVLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 510 ~eEF~~~lll~Ps~~l~d~irs~W~e~~tvidV~~~~~I~sg~~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
|+.|.+++...|...... ++ .+....+|...+.|+|+|=.++..++||=|+|+||+
T Consensus 206 YE~~K~~l~e~~~~s~~~---------~~-------~~k~~~df~~~m~aa~~aK~~As~iaYPHEVvRTRL 261 (319)
T KOG0757|consen 206 YEKIKQYLLERPNASSMN---------GT-------TEKESLDFGGFMGAAGLAKFIASIIAYPHEVVRTRL 261 (319)
T ss_pred HHHHHHHHHhccchhhhc---------Cc-------ccccccCHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 777888888766532111 11 112234578889999999999999999999999984
No 175
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=45.81 E-value=82 Score=29.21 Aligned_cols=77 Identities=10% Similarity=0.099 Sum_probs=40.7
Q ss_pred HHHHHHHHHcCCC--CCcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcc-----hHHHHhhhccchhHHHHHHH
Q 008009 390 EGRRFFEELDRDG--DGQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFG-----WKQFLSLMEQKEPTILRAYT 462 (581)
Q Consensus 390 eLr~lF~~~D~d~--dG~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~Is-----feEF~~~L~~~ee~Lr~aFk 462 (581)
.+.++|.+..-+. |..|+..|+..++.. +|...... .....+ .+.-..+ -+..+..
T Consensus 42 ~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~----------iy~~l~~~-~p~~~~i~~~~v~~a~~L------~ln~Ll~ 104 (127)
T PF09068_consen 42 NVIEAFREHGLNQSNDSSLSVSQLETLLSS----------IYEFLNKR-LPTLHQIPSRPVDLAVDL------LLNWLLN 104 (127)
T ss_dssp HHHHHHHHTT---T-TSEEEHHHHHHHHHH----------HHHHHHHH-STTS--HH-----HHHHH------HHHHHHH
T ss_pred HHHHHHHHcCCCcccCCCCCHHHHHHHHHH----------HHHHHHHH-CCCCCCCCchhHHHHHHH------HHHHHHH
Confidence 4455565554432 456888888877654 33222222 122222 1232222 2445789
Q ss_pred HHcCCCCCcccHHHHHHHHHH
Q 008009 463 SLCLSKSGTLQKSEILASLKN 483 (581)
Q Consensus 463 ~~D~DgdG~Is~eEf~~vLk~ 483 (581)
.||.+++|.|+.-.|+.+|..
T Consensus 105 vyD~~rtG~I~vls~KvaL~~ 125 (127)
T PF09068_consen 105 VYDSQRTGKIRVLSFKVALIT 125 (127)
T ss_dssp HH-TT--SEEEHHHHHHHHHH
T ss_pred HhCCCCCCeeehhHHHHHHHH
Confidence 999999999999999887754
No 176
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion]
Probab=45.57 E-value=6.9 Score=40.96 Aligned_cols=25 Identities=32% Similarity=0.604 Sum_probs=20.9
Q ss_pred hhhchhhhhhhccccCccccccCCC
Q 008009 557 ALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 557 fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
-++|.++..+..|++-|||+||+|+
T Consensus 42 ~lgG~lsCG~TH~aitPLDlvKcrm 66 (333)
T KOG0767|consen 42 TLGGILSCGTTHTAITPLDLVKCRM 66 (333)
T ss_pred hhcceeccccccccccchhheeeee
Confidence 4557777788889999999999995
No 177
>cd08316 Death_FAS_TNFRSF6 Death domain of FAS or TNF receptor superfamily member 6. Death Domain (DD) found in the FS7-associated cell surface antigen (FAS). FAS, also known as TNFRSF6 (TNF receptor superfamily member 6), APT1, CD95, FAS1, or APO-1, together with FADD (Fas-associating via Death Domain) and caspase 8, is an integral part of the death inducing signalling complex (DISC), which plays an important role in the induction of apoptosis and is activated by binding of the ligand FasL to FAS. FAS also plays a critical role in self-tolerance by eliminating cell types (autoreactive T and B cells) that contribute to autoimmunity. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in sign
Probab=44.02 E-value=1.5e+02 Score=26.39 Aligned_cols=78 Identities=14% Similarity=0.146 Sum_probs=52.1
Q ss_pred CcccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccchhHHHHHHHHHcCCCCCcccHHHHHHHHHH
Q 008009 404 GQVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQKEPTILRAYTSLCLSKSGTLQKSEILASLKN 483 (581)
Q Consensus 404 G~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~ 483 (581)
..+...+++.+.+.+|+++..++.+-..+..+ .. ++..++++.+=...-..-+...+..+|+.
T Consensus 16 ~~~~~~~wK~faR~lglse~~Id~I~~~~~~d------~~-----------Eq~~qmL~~W~~~~G~~a~~~~Li~aLr~ 78 (97)
T cd08316 16 DVMTLKDVKKFVRKSGLSEPKIDEIKLDNPQD------TA-----------EQKVQLLRAWYQSHGKTGAYRTLIKTLRK 78 (97)
T ss_pred HHcCHHHHHHHHHHcCCCHHHHHHHHHcCCCC------hH-----------HHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 35778899999999999998888876555333 12 33333444443222223456888899999
Q ss_pred cCCCCCHHHHHHHHH
Q 008009 484 AGLPANEENAVAMMR 498 (581)
Q Consensus 484 lG~~lSeeel~~Lf~ 498 (581)
++....-+.+..++.
T Consensus 79 ~~l~~~Ad~I~~~l~ 93 (97)
T cd08316 79 AKLCTKADKIQDIIE 93 (97)
T ss_pred ccchhHHHHHHHHHH
Confidence 988777777776654
No 178
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion]
Probab=43.35 E-value=5.3 Score=41.85 Aligned_cols=28 Identities=18% Similarity=0.260 Sum_probs=23.6
Q ss_pred hhhhhhchhhhhhhccccCccccccCCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
..+...++++=+++.|+|||.++||||+
T Consensus 207 ~~~i~~as~SKv~Ast~TYP~qVlRtRL 234 (299)
T KOG0764|consen 207 LDYIALASLSKVFASTLTYPHQVLRTRL 234 (299)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 4456666699999999999999999985
No 179
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.07 E-value=18 Score=39.40 Aligned_cols=63 Identities=14% Similarity=0.127 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHH-HhCCCCCCcccHHHHHHH
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNAGLPANEENAVAMMR-FLNADTEESISYGHFRNF 516 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~-~lD~d~DGkIs~eEF~~~ 516 (581)
.++++++|+.+|..++|+|+..-++.++...+..+++...-.+++ .+|...-|.|-.++|..-
T Consensus 308 s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~~iil~~d~lg~ 371 (449)
T KOG2871|consen 308 SEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESLGIILLEDFLGE 371 (449)
T ss_pred CHHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhcceEEecccccc
Confidence 688999999999999999999999999998876666555444443 456666666665555443
No 180
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.47 E-value=1.8e+02 Score=27.93 Aligned_cols=86 Identities=14% Similarity=0.112 Sum_probs=58.6
Q ss_pred HHHHHHcCCCCCcccHHHHHHHHHHc----CCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------hhHHHHHHH
Q 008009 393 RFFEELDRDGDGQVNLEDLEIAMRKR----KLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------EPTILRAYT 462 (581)
Q Consensus 393 ~lF~~~D~d~dG~Is~eEf~~~L~~l----gl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------ee~Lr~aFk 462 (581)
-+|+.++. ||.++..|...+..-+ |++.+++..++.....- +...++|-.|..-+..+ .+-+..++.
T Consensus 34 Llf~Vm~A--DG~v~~~E~~a~r~il~~~f~i~~~~l~ali~~~e~~-~~Ea~d~y~fts~l~r~Ld~e~R~eli~~mwe 110 (148)
T COG4103 34 LLFHVMEA--DGTVSESEREAFRAILKENFGIDGEELDALIEAGEEA-GYEAIDLYSFTSVLKRHLDEEQRLELIGLMWE 110 (148)
T ss_pred HHHHHHhc--ccCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 56777765 4788888866554333 78999998888887666 67789999998877744 222334445
Q ss_pred HHcCCCCCcccHHHHHHHHHH
Q 008009 463 SLCLSKSGTLQKSEILASLKN 483 (581)
Q Consensus 463 ~~D~DgdG~Is~eEf~~vLk~ 483 (581)
.. .-||.++.-|-..+++.
T Consensus 111 Ia--~ADg~l~e~Ed~vi~Rv 129 (148)
T COG4103 111 IA--YADGELDESEDHVIWRV 129 (148)
T ss_pred HH--HccccccHHHHHHHHHH
Confidence 44 44577888776655554
No 181
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=36.36 E-value=36 Score=32.24 Aligned_cols=32 Identities=6% Similarity=0.020 Sum_probs=16.7
Q ss_pred cccHHHHHHHHHHc-CCCCCHHHHHHHHHHhCC
Q 008009 471 TLQKSEILASLKNA-GLPANEENAVAMMRFLNA 502 (581)
Q Consensus 471 ~Is~eEf~~vLk~l-G~~lSeeel~~Lf~~lD~ 502 (581)
.|+.+-|+.+|+.+ ...+.++-+.++|..+-.
T Consensus 48 ~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~~ 80 (138)
T PF14513_consen 48 PIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQK 80 (138)
T ss_dssp EE-HHHHHHHHHHHTT-S--HHHHHHHHHHS--
T ss_pred CcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhC
Confidence 66666666666654 444566666677666643
No 182
>PLN02222 phosphoinositide phospholipase C 2
Probab=36.33 E-value=83 Score=36.56 Aligned_cols=64 Identities=16% Similarity=0.267 Sum_probs=50.0
Q ss_pred cHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcC----CCHHHHHHHHHhhcCCCCCCCcchHHHHhhhcc
Q 008009 387 TEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRK----LPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 387 te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg----l~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~ 452 (581)
...++..+|..+-. ++.++.++|..+|.... .+.+.++.++..+..-...+.++++.|..||..
T Consensus 23 ~~~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 23 APREIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred CcHHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 55699999999864 47999999999998863 356788888888743214567999999998864
No 183
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=34.66 E-value=28 Score=32.05 Aligned_cols=34 Identities=9% Similarity=0.093 Sum_probs=23.8
Q ss_pred CCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHhC
Q 008009 487 PANEENAVAMMRFLNADTEESISYGHFRNFMVLL 520 (581)
Q Consensus 487 ~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll~ 520 (581)
.+++++++.+...+-.|..|+|.|.||+.-+...
T Consensus 3 iLtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs~e 36 (118)
T PF08976_consen 3 ILTDEQFDRLWNEMPVNAKGRLKYQEFLSKFSSE 36 (118)
T ss_dssp ---HHHHHHHHTTS-B-TTS-EEHHHHHHHT---
T ss_pred cccHHHhhhhhhhCcCCccCCEeHHHHHHHcccc
Confidence 3689999999999999999999999999877643
No 184
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=33.76 E-value=49 Score=30.01 Aligned_cols=72 Identities=17% Similarity=0.224 Sum_probs=45.9
Q ss_pred CCCcccHHHHHHHHHHc----CCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc------hhHHHHHHHHHcCCCCCc
Q 008009 402 GDGQVNLEDLEIAMRKR----KLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK------EPTILRAYTSLCLSKSGT 471 (581)
Q Consensus 402 ~dG~Is~eEf~~~L~~l----gl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~------ee~Lr~aFk~~D~DgdG~ 471 (581)
-||.|+.+|...+...+ +++......++..++.- ....+++.+|...+... ..-+..++.....| |.
T Consensus 36 aDG~v~~~E~~~i~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~r~~ll~~l~~ia~AD--G~ 112 (140)
T PF05099_consen 36 ADGEVDPEEIEAIRQLLAERFGLSPEEAEELIELADEL-KQEPIDLEELLRELRDSLSPEEREDLLRMLIAIAYAD--GE 112 (140)
T ss_dssp TTSS--CHHHHHHHHHHHHCGCGSCHHHHHHHHHHCHH-HHHCCHHHHHHHHHCTS--HHHHHHHHHHHHHHCTCT--TC
T ss_pred cCCCCCHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHH-HhccccHHHHHHHHHHhhchHHHHHHHHHHHHHHhcC--CC
Confidence 47999999988776655 56677777777777655 45578888888776653 23355556666444 56
Q ss_pred ccHHH
Q 008009 472 LQKSE 476 (581)
Q Consensus 472 Is~eE 476 (581)
++..|
T Consensus 113 ~~~~E 117 (140)
T PF05099_consen 113 ISPEE 117 (140)
T ss_dssp -SCCH
T ss_pred CCHHH
Confidence 66665
No 185
>PLN02228 Phosphoinositide phospholipase C
Probab=33.58 E-value=1.2e+02 Score=35.23 Aligned_cols=64 Identities=11% Similarity=0.194 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcC--CCCCHHHHHHHHHHhCCC----CCCcccHHHHHHHHHh
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNAG--LPANEENAVAMMRFLNAD----TEESISYGHFRNFMVL 519 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG--~~lSeeel~~Lf~~lD~d----~DGkIs~eEF~~~lll 519 (581)
...+..+|..+-. ++.++.++|..+|.... ...+.+.+..++..+... ..|.++.+.|..|+..
T Consensus 23 ~~ei~~if~~~s~--~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 23 PVSIKRLFEAYSR--NGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred cHHHHHHHHHhcC--CCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 3566777777642 35688888887776652 224556677777776543 2356899999988864
No 186
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion]
Probab=32.92 E-value=8.8 Score=40.15 Aligned_cols=27 Identities=22% Similarity=0.345 Sum_probs=24.9
Q ss_pred hhhhhhchhhhhhhccccCccccccCC
Q 008009 554 LKSALAGGLSCALSTSLMHPVDTIKAN 580 (581)
Q Consensus 554 ~k~fLAGGiAGAvSrT~taPLDrlKTR 580 (581)
+..|+.|++|=+++.++|||+=++|++
T Consensus 205 l~~FilGAvaK~~ATvvTYPli~vksm 231 (308)
T KOG0769|consen 205 LMAFILGAVAKAIATVVTYPLIVVKSM 231 (308)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 566999999999999999999999976
No 187
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion]
Probab=32.26 E-value=11 Score=39.35 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=26.0
Q ss_pred hhhhhhhchhhhhhhccccCccccccCCC
Q 008009 553 VLKSALAGGLSCALSTSLMHPVDTIKANP 581 (581)
Q Consensus 553 ~~k~fLAGGiAGAvSrT~taPLDrlKTR~ 581 (581)
....++.|.+||++..-.|.||+++-||.
T Consensus 102 t~~~Lllga~AGsinvl~T~Plwvv~TRm 130 (308)
T KOG0769|consen 102 TKADLLLGAAAGSINVLLTTPLWVVNTRM 130 (308)
T ss_pred hHHHHHHHHHHhhhHHHhcChHHHHHHHH
Confidence 46679999999999999999999998873
No 188
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=32.07 E-value=1.3e+02 Score=34.98 Aligned_cols=32 Identities=13% Similarity=0.315 Sum_probs=27.4
Q ss_pred HHHHHHHhCCCCCCcccHHHHHHHHHhCCCCC
Q 008009 493 AVAMMRFLNADTEESISYGHFRNFMVLLPSDR 524 (581)
Q Consensus 493 l~~Lf~~lD~d~DGkIs~eEF~~~lll~Ps~~ 524 (581)
+..+|..+|.|+||.++-.|+..++...|...
T Consensus 317 l~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~p 348 (625)
T KOG1707|consen 317 LVDVFEKFDRDNDGALSPEELKDLFSTAPGSP 348 (625)
T ss_pred HHHHHHhccCCCCCCcCHHHHHHHhhhCCCCC
Confidence 56788899999999999999999998877543
No 189
>PLN02222 phosphoinositide phospholipase C 2
Probab=31.98 E-value=1.1e+02 Score=35.51 Aligned_cols=64 Identities=11% Similarity=0.167 Sum_probs=46.8
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcC-C-CCCHHHHHHHHHHhCC-CCCCcccHHHHHHHHHh
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNAG-L-PANEENAVAMMRFLNA-DTEESISYGHFRNFMVL 519 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG-~-~lSeeel~~Lf~~lD~-d~DGkIs~eEF~~~lll 519 (581)
...+..+|..|-. ++.++.++|..+|.... . ..+.+.+..|++.+.. -..+.++++.|..||..
T Consensus 24 ~~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 24 PREIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred cHHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 3567888888743 47899999999887763 2 3567778888887632 23566999999999874
No 190
>PLN02228 Phosphoinositide phospholipase C
Probab=29.03 E-value=1.5e+02 Score=34.47 Aligned_cols=65 Identities=14% Similarity=0.273 Sum_probs=50.1
Q ss_pred ccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcC----CCHHHHHHHHHhhcCCC---CCCCcchHHHHhhhcc
Q 008009 386 YTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRK----LPRRYAREFMRRTRSHL---FSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 386 ~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg----l~~eel~~Lf~~~D~d~---gDG~IsfeEF~~~L~~ 452 (581)
....++..+|..+-. ++.++.++|..+|.... .+.+.+..++..+.... ..+.++.+.|..+|..
T Consensus 21 ~~~~ei~~if~~~s~--~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 21 EPPVSIKRLFEAYSR--NGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred CCcHHHHHHHHHhcC--CCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 367899999998864 36899999999998873 35677888998886431 2467999999998754
No 191
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=28.58 E-value=1.9e+02 Score=25.28 Aligned_cols=48 Identities=10% Similarity=0.188 Sum_probs=35.7
Q ss_pred CcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHH
Q 008009 470 GTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFM 517 (581)
Q Consensus 470 G~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~l 517 (581)
..||.+||..+-+++++++++++++.++..+-.+.=.-.+-++=.+++
T Consensus 13 n~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~k~inIfn~~~r~~ll 60 (85)
T PF11116_consen 13 NNITAKELLKYSKQYNISITKKQAEQIANILRGKNINIFNEQERKKLL 60 (85)
T ss_pred hcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHH
Confidence 368999999999999999999999999988765443333444433333
No 192
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=26.03 E-value=1.5e+02 Score=24.61 Aligned_cols=46 Identities=20% Similarity=0.302 Sum_probs=31.0
Q ss_pred ccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHH
Q 008009 472 LQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFM 517 (581)
Q Consensus 472 Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~l 517 (581)
++-+++..+++..|..++.+++.++++.-|..+--..+-..+..|+
T Consensus 14 l~d~~m~~if~l~~~~vs~~el~a~lrke~~~~y~~c~D~~L~~FL 59 (68)
T PF07308_consen 14 LKDDDMIEIFALAGFEVSKAELSAWLRKEDEKGYKECSDQLLRNFL 59 (68)
T ss_pred CChHHHHHHHHHcCCccCHHHHHHHHCCCCCccccccChHHHHHHH
Confidence 4566788888888888888888888887554443344444444444
No 193
>PLN02230 phosphoinositide phospholipase C 4
Probab=25.72 E-value=2e+02 Score=33.59 Aligned_cols=65 Identities=8% Similarity=0.135 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHcCCCCCcccHHHHHHHHHHcC-C--CCCHHHHHHHHHHhCC-------CCCCcccHHHHHHHHHh
Q 008009 454 EPTILRAYTSLCLSKSGTLQKSEILASLKNAG-L--PANEENAVAMMRFLNA-------DTEESISYGHFRNFMVL 519 (581)
Q Consensus 454 ee~Lr~aFk~~D~DgdG~Is~eEf~~vLk~lG-~--~lSeeel~~Lf~~lD~-------d~DGkIs~eEF~~~lll 519 (581)
...+..+|..|-.+ .++++.++|..+|.... . ..+.+.+..++..+-. -..+.++++.|..|+..
T Consensus 28 ~~ei~~lf~~~s~~-~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s 102 (598)
T PLN02230 28 VADVRDLFEKYADG-DAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFS 102 (598)
T ss_pred cHHHHHHHHHHhCC-CCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcC
Confidence 45788889888533 37899999999998764 2 3466777777764421 12346999999999874
No 194
>PF01535 PPR: PPR repeat; InterPro: IPR002885 This entry represents the PPR repeat. Pentatricopeptide repeat (PPR) proteins are characterised by tandem repeats of a degenerate 35 amino acid motif []. Most of PPR proteins have roles in mitochondria or plastid []. PPR repeats were discovered while screening Arabidopsis proteins for those predicted to be targeted to mitochondria or chloroplast [, ]. Some of these proteins have been shown to play a role in post-transcriptional processes within organelles and they are thought to be sequence-specific RNA-binding proteins [, , ]. Plant genomes have between one hundred to five hundred PPR genes per genome whereas non-plant genomes encode two to six PPR proteins. Although no PPR structures are yet known, the motif is predicted to fold into a helix-turn-helix structure similar to those found in the tetratricopeptide repeat (TPR) family (see PDOC50005 from PROSITEDOC) []. The plant PPR protein family has been divided in two subfamilies on the basis of their motif content and organisation [, ]. Examples of PPR repeat-containing proteins include PET309 P32522 from SWISSPROT, which may be involved in RNA stabilisation [], and crp1, which is involved in RNA processing []. The repeat is associated with a predicted plant protein O49549 from SWISSPROT that has a domain organisation similar to the human BRCA1 protein.
Probab=25.56 E-value=27 Score=22.69 Aligned_cols=13 Identities=31% Similarity=0.680 Sum_probs=9.9
Q ss_pred HHHHHHHhhhccc
Q 008009 143 VTWSLLFNGFVQS 155 (581)
Q Consensus 143 ~~~~~~~~~~~~~ 155 (581)
|||+.|++++.+.
T Consensus 1 v~y~~li~~~~~~ 13 (31)
T PF01535_consen 1 VTYNSLISGYCKM 13 (31)
T ss_pred CcHHHHHHHHHcc
Confidence 5788888888764
No 195
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=24.41 E-value=4e+02 Score=22.72 Aligned_cols=73 Identities=19% Similarity=0.277 Sum_probs=37.2
Q ss_pred CCCcccHHHHHHH---HHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccc--------hhHHHHHHHHHcCCCCC
Q 008009 402 GDGQVNLEDLEIA---MRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQK--------EPTILRAYTSLCLSKSG 470 (581)
Q Consensus 402 ~dG~Is~eEf~~~---L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~--------ee~Lr~aFk~~D~DgdG 470 (581)
-||.++.+|...+ +..+.....+...+...+... .+...++.+|...+... ..-+..++...- -||
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~r~~~l~~l~~vA~--ADG 88 (106)
T cd07316 12 ADGRVSEAEIQAARALMDQMGLDAEARREAIRLFNEG-KESDFGLEEYARQFRRACGGRPELLLQLLEFLFQIAY--ADG 88 (106)
T ss_pred ccCCcCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh-CcCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH--HcC
Confidence 3788888886544 444445443444444444332 23336777777655431 112333344432 246
Q ss_pred cccHHHH
Q 008009 471 TLQKSEI 477 (581)
Q Consensus 471 ~Is~eEf 477 (581)
.++..|-
T Consensus 89 ~~~~~E~ 95 (106)
T cd07316 89 ELSEAER 95 (106)
T ss_pred CCCHHHH
Confidence 6777664
No 196
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=23.80 E-value=46 Score=33.54 Aligned_cols=56 Identities=14% Similarity=0.169 Sum_probs=35.1
Q ss_pred HHHHcCC-CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHH
Q 008009 461 YTSLCLS-KSGTLQKSEILASLKNAGLPANEENAVAMMRFLNADTEESISYGHFRNFMV 518 (581)
Q Consensus 461 Fk~~D~D-gdG~Is~eEf~~vLk~lG~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~ll 518 (581)
|-.+|+. .+|+++-.|+.-+-. ..-..+.-+..+|+..|.|+||+|+.+||-..+-
T Consensus 193 f~qld~~p~d~~~sh~el~pl~a--p~ipme~c~~~f~e~cd~~nd~~ial~ew~~c~g 249 (259)
T KOG4004|consen 193 FGQLDQHPIDGYLSHTELAPLRA--PLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFG 249 (259)
T ss_pred eccccCCCccccccccccccccC--CcccHHhhchhhhhcccCCCCCceeHHHhhcccC
Confidence 6666653 578888877654311 1111233456778888888888888888876554
No 197
>PF04282 DUF438: Family of unknown function (DUF438); InterPro: IPR007380 This is a a group of uncharacterised proteins.
Probab=22.22 E-value=3.7e+02 Score=22.68 Aligned_cols=41 Identities=15% Similarity=0.195 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHcCCCCCcccHHHHHHHHHHc---CCCHHHHHHHHHhh
Q 008009 388 EAEGRRFFEELDRDGDGQVNLEDLEIAMRKR---KLPRRYAREFMRRT 432 (581)
Q Consensus 388 e~eLr~lF~~~D~d~dG~Is~eEf~~~L~~l---gl~~eel~~Lf~~~ 432 (581)
.+++++-|... =+.|++.|+..+-+.+ |+|.++++.+...+
T Consensus 15 ~e~vk~~F~~~----~~~Vs~~EI~~~Eq~Li~eG~~~eeiq~LCdvH 58 (71)
T PF04282_consen 15 PEEVKEEFKKL----FSDVSASEISAAEQELIQEGMPVEEIQKLCDVH 58 (71)
T ss_pred HHHHHHHHHHH----HCCCCHHHHHHHHHHHHHcCCCHHHHHHHhHHH
Confidence 34555555432 2457888887776666 78888887765543
No 198
>cd08313 Death_TNFR1 Death domain of Tumor Necrosis Factor Receptor 1. Death Domain (DD) found in tumor necrosis factor receptor-1 (TNFR-1). TNFR-1 has many names including TNFRSF1A, CD120a, p55, p60, and TNFR60. It activates two major intracellular signaling pathways that lead to the activation of the transcription factor NF-kB and the induction of cell death. Upon binding of its ligand TNF, TNFR-1 trimerizes which leads to the recruitment of an adaptor protein named TNFR-associated death domain protein (TRADD) through a DD/DD interaction. Mutations in the TNFRSF1A gene causes TNFR-associated periodic syndrome (TRAPS), a rare disorder characterized recurrent fever, myalgia, abdominal pain, conjunctivitis and skin eruptions. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation a
Probab=21.40 E-value=3.6e+02 Score=23.14 Aligned_cols=66 Identities=11% Similarity=0.038 Sum_probs=44.5
Q ss_pred cccHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCCcchHHHHhhhccchhHHHHHHHHHcCCCCC-cccHHHHHHHHHH
Q 008009 405 QVNLEDLEIAMRKRKLPRRYAREFMRRTRSHLFSKSFGWKQFLSLMEQKEPTILRAYTSLCLSKSG-TLQKSEILASLKN 483 (581)
Q Consensus 405 ~Is~eEf~~~L~~lgl~~eel~~Lf~~~D~d~gDG~IsfeEF~~~L~~~ee~Lr~aFk~~D~DgdG-~Is~eEf~~vLk~ 483 (581)
.+...+++.+.+.+|+++.+++.+-..+. + . .+...+++..+=....+ .-+.+.+.++|+.
T Consensus 8 ~v~~~~wk~~~R~LGlse~~Id~ie~~~~-~-------~----------~Eq~yqmL~~W~~~~g~~~At~~~L~~aLr~ 69 (80)
T cd08313 8 EVPPRRWKEFVRRLGLSDNEIERVELDHR-R-------C----------RDAQYQMLKVWKERGPRPYATLQHLLSVLRD 69 (80)
T ss_pred hCCHHHHHHHHHHcCCCHHHHHHHHHhCC-C-------h----------HHHHHHHHHHHHHhcCCCcchHHHHHHHHHH
Confidence 46788999999999999988887643332 2 1 23444455555332222 6788999999998
Q ss_pred cCCCC
Q 008009 484 AGLPA 488 (581)
Q Consensus 484 lG~~l 488 (581)
++...
T Consensus 70 ~~l~~ 74 (80)
T cd08313 70 MELVG 74 (80)
T ss_pred cCcHH
Confidence 87643
No 199
>PLN02230 phosphoinositide phospholipase C 4
Probab=21.16 E-value=2.4e+02 Score=32.95 Aligned_cols=65 Identities=14% Similarity=0.163 Sum_probs=47.7
Q ss_pred cHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcC-----CCHHHHHHHHHhhcCCC------CCCCcchHHHHhhhcc
Q 008009 387 TEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRK-----LPRRYAREFMRRTRSHL------FSKSFGWKQFLSLMEQ 452 (581)
Q Consensus 387 te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lg-----l~~eel~~Lf~~~D~d~------gDG~IsfeEF~~~L~~ 452 (581)
...+++.+|..+-.++ +.++.++|..+|..-. .+.+.++.++..+-... ..+.++++.|..+|..
T Consensus 27 p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s 102 (598)
T PLN02230 27 PVADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFS 102 (598)
T ss_pred CcHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcC
Confidence 4579999999996444 8999999999998864 25566777776542220 2346999999997764
No 200
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.50 E-value=1.3e+02 Score=28.85 Aligned_cols=74 Identities=16% Similarity=0.123 Sum_probs=49.5
Q ss_pred HHHHHHcCCCCCcccHHHHHHHHHHc--CCCCCHHHHHHHHHHhCCCCCCcccHHHHHHHHHh-CCCCCCccchHHHHH
Q 008009 459 RAYTSLCLSKSGTLQKSEILASLKNA--GLPANEENAVAMMRFLNADTEESISYGHFRNFMVL-LPSDRLQDDPRSIWF 534 (581)
Q Consensus 459 ~aFk~~D~DgdG~Is~eEf~~vLk~l--G~~lSeeel~~Lf~~lD~d~DGkIs~eEF~~~lll-~Ps~~l~d~irs~W~ 534 (581)
-+|..++. ||.++..|...+..-+ .+.++.+++.+++.....-+...++|..|...+.. ++.+.=.+.+..+|.
T Consensus 34 Llf~Vm~A--DG~v~~~E~~a~r~il~~~f~i~~~~l~ali~~~e~~~~Ea~d~y~fts~l~r~Ld~e~R~eli~~mwe 110 (148)
T COG4103 34 LLFHVMEA--DGTVSESEREAFRAILKENFGIDGEELDALIEAGEEAGYEAIDLYSFTSVLKRHLDEEQRLELIGLMWE 110 (148)
T ss_pred HHHHHHhc--ccCcCHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 46788754 4667777765543322 46678888888888877666777888889887773 343333356677784
No 201
>PF00046 Homeobox: Homeobox domain not present here.; InterPro: IPR001356 The homeobox domain was first identified in a number of drosophila homeotic and segmentation proteins, but is now known to be well-conserved in many other animals, including vertebrates [, , ]. Hox genes encode homeodomain-containing transcriptional regulators that operate differential genetic programs along the anterior-posterior axis of animal bodies []. The domain binds DNA through a helix-turn-helix (HTH) structure. The HTH motif is characterised by two alpha-helices, which make intimate contacts with the DNA and are joined by a short turn. The second helix binds to DNA via a number of hydrogen bonds and hydrophobic interactions, which occur between specific side chains and the exposed bases and thymine methyl groups within the major groove of the DNA []. The first helix helps to stabilise the structure. The motif is very similar in sequence and structure in a wide range of DNA-binding proteins (e.g., cro and repressor proteins, homeotic proteins, etc.). One of the principal differences between HTH motifs in these different proteins arises from the stereo-chemical requirement for glycine in the turn which is needed to avoid steric interference of the beta-carbon with the main chain: for cro and repressor proteins the glycine appears to be mandatory, while for many of the homeotic and other DNA-binding proteins the requirement is relaxed.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2DA3_A 1LFB_A 2LFB_A 2ECB_A 2DA5_A 3D1N_O 3A03_A 2XSD_C 3CMY_A 1AHD_P ....
Probab=20.26 E-value=2.5e+02 Score=21.33 Aligned_cols=45 Identities=16% Similarity=0.236 Sum_probs=33.8
Q ss_pred cccHHHHHHHHHHHcCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHh
Q 008009 385 RYTEAEGRRFFEELDRDGDGQVNLEDLEIAMRKRKLPRRYAREFMRR 431 (581)
Q Consensus 385 ~~te~eLr~lF~~~D~d~dG~Is~eEf~~~L~~lgl~~eel~~Lf~~ 431 (581)
.++...+..+-..|.. +.+++.++...+...+|++...+..-|..
T Consensus 6 ~~t~~q~~~L~~~f~~--~~~p~~~~~~~la~~l~l~~~~V~~WF~n 50 (57)
T PF00046_consen 6 RFTKEQLKVLEEYFQE--NPYPSKEEREELAKELGLTERQVKNWFQN 50 (57)
T ss_dssp SSSHHHHHHHHHHHHH--SSSCHHHHHHHHHHHHTSSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH--hccccccccccccccccccccccccCHHH
Confidence 3455555555555554 67999999999999999999888877653
Done!