BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008012
(581 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 154/300 (51%), Gaps = 14/300 (4%)
Query: 275 LATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFR-S 333
L +R S +L+ A+D F+ N+LG GGFG VYKG L+DGT VA+K + Q
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ 81
Query: 334 FNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQ---DIPDR 390
F +E E++ HRNL+++ C + LV +M NGS+ L Q D P R
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 141
Query: 391 LNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQ 450
I + A L YLH ++H D+K +NILLDE A V DFG++KL+ D V
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 201
Query: 451 TMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTG---EMNLKNWV 507
+ TIG++APE+ S G S K DV+ YG++LLE T ++ D ++ L +WV
Sbjct: 202 AVR-GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 508 KESLPH-GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLK 566
K L L + D +L + N+ ++ L+ + AL C P +R M + L+
Sbjct: 261 KGLLKEKKLEALVDVDL--QGNYKDEEVEQLIQV---ALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 151/296 (51%), Gaps = 21/296 (7%)
Query: 280 RTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECE 339
R +DLE AT+ F+ L+G G FG VYKG+L DG VA+K + Q F +E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP-------DRLN 392
L RH +L+ ++ C N L+ ++M NG+L + LY D+P RL
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG----SDLPTMSMSWEQRLE 143
Query: 393 IMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTM 452
I I A L YLH + ++H D+K NILLDEN V ++DFGISK E D + + +
Sbjct: 144 ICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXV 200
Query: 453 TIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM-NLKNWVKESL 511
T+GY+ PE+ +G ++ K DVYS+G++L E + + EM NL W ES
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 512 PHG-LPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLK 566
+G L +I D NL + R + L A+ C A + R M D KL+
Sbjct: 261 NNGQLEQIVDPNLADK-----IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 151/300 (50%), Gaps = 14/300 (4%)
Query: 275 LATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFR-S 333
L +R S +L+ A+D F N+LG GGFG VYKG L+DG VA+K + Q
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ 73
Query: 334 FNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQ---DIPDR 390
F +E E++ HRNL+++ C + LV +M NGS+ L Q D P R
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 391 LNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQ 450
I + A L YLH ++H D+K +NILLDE A V DFG++KL+ D V
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 193
Query: 451 TMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTG---EMNLKNWV 507
+ IG++APE+ S G S K DV+ YG++LLE T ++ D ++ L +WV
Sbjct: 194 AVR-GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 508 KESLPH-GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLK 566
K L L + D +L + N+ ++ L+ + AL C P +R M + L+
Sbjct: 253 KGLLKEKKLEALVDVDL--QGNYKDEEVEQLIQV---ALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 150/296 (50%), Gaps = 21/296 (7%)
Query: 280 RTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECE 339
R +DLE AT+ F+ L+G G FG VYKG+L DG VA+K + Q F +E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP-------DRLN 392
L RH +L+ ++ C N L+ ++M NG+L + LY D+P RL
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYG----SDLPTMSMSWEQRLE 143
Query: 393 IMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTM 452
I I A L YL H+ ++H D+K NILLDEN V ++DFGISK E + + +
Sbjct: 144 ICIGAARGLHYL---HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXV 200
Query: 453 TIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM-NLKNWVKESL 511
T+GY+ PE+ +G ++ K DVYS+G++L E + + EM NL W ES
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 512 PHG-LPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLK 566
+G L +I D NL + R + L A+ C A + R M D KL+
Sbjct: 261 NNGQLEQIVDPNLADK-----IRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 123/229 (53%), Gaps = 23/229 (10%)
Query: 282 SYLDLERATDGFNE------CNLLGSGGFGSVYKGILSDGTTVAIK----IFNLQLEQAF 331
S+ +L+ T+ F+E N +G GGFG VYKG +++ TTVA+K + ++ E+
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELK 74
Query: 332 RSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPD-- 389
+ F+ E +V+ +H NL+++L + + LV +MPNGSL L + P
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLS 131
Query: 390 ---RLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446
R I A + +LH H +H D+K +NILLDE A +SDFG+++ +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDE 495
+V+ + + T YMAPE G ++ K D+YS+G++LLE T DE
Sbjct: 189 TVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 122/229 (53%), Gaps = 23/229 (10%)
Query: 282 SYLDLERATDGFNE------CNLLGSGGFGSVYKGILSDGTTVAIK----IFNLQLEQAF 331
S+ +L+ T+ F+E N +G GGFG VYKG +++ TTVA+K + ++ E+
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELK 74
Query: 332 RSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPD-- 389
+ F+ E +V+ +H NL+++L + + LV +MPNGSL L + P
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLS 131
Query: 390 ---RLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446
R I A + +LH H +H D+K +NILLDE A +SDFG+++ +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDE 495
+V+ + T YMAPE G ++ K D+YS+G++LLE T DE
Sbjct: 189 TVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 236
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 121/229 (52%), Gaps = 23/229 (10%)
Query: 282 SYLDLERATDGFNE------CNLLGSGGFGSVYKGILSDGTTVAIK----IFNLQLEQAF 331
S+ +L+ T+ F+E N +G GGFG VYKG +++ TTVA+K + ++ E+
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELK 68
Query: 332 RSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPD-- 389
+ F+ E +V+ +H NL+++L + + LV +MPNGSL L + P
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL---SCLDGTPPLS 125
Query: 390 ---RLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446
R I A + +LH H +H D+K +NILLDE A +SDFG+++ +
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDE 495
V+ + T YMAPE G ++ K D+YS+G++LLE T DE
Sbjct: 183 XVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 230
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 117/229 (51%), Gaps = 23/229 (10%)
Query: 282 SYLDLERATDGFNE------CNLLGSGGFGSVYKGILSDGTTVAIK----IFNLQLEQAF 331
S+ +L+ T+ F+E N G GGFG VYKG +++ TTVA+K + ++ E+
Sbjct: 7 SFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEELK 65
Query: 332 RSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP--- 388
+ F+ E +V +H NL+++L + + LV + PNGSL L + P
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL---SCLDGTPPLS 122
Query: 389 --DRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446
R I A + +LH H +H D+K +NILLDE A +SDFG+++ +
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDE 495
V + + T Y APE G ++ K D+YS+G++LLE T DE
Sbjct: 180 XVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE 227
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRS-----FNSECEVLRNVRHRNLIKIL 353
+G+G FG+V++ G+ VA+KI +EQ F + F E +++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKIL---MEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTP 411
+ ++V E++ GSL + L+ + + +R L++ DVA + YLH+ + P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPP 159
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVS 471
+VH DLK N+L+D+ V DFG+S+L + + T +MAPE + +
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSN 217
Query: 472 SKCDVYSYGILLLETFTRKKP 492
K DVYS+G++L E T ++P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 119/227 (52%), Gaps = 23/227 (10%)
Query: 299 LGSGGFGSVYKG-ILSDGTTVAIKIFNL-------QLEQAFRSFNSECEVLRNVRHRNLI 350
+G GGFG V+KG ++ D + VAIK L ++ + F+ F E ++ N+ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ N +V+EF+P G L L + +L +M+D+AL +EY+ + +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN-QNP 143
Query: 411 PVVHCDLKPSNILL---DEN--MVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF- 464
P+VH DL+ NI L DEN + A V+DFG+S+ + SV + + +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---QSVHSV--SGLLGNFQWMAPETI 198
Query: 465 -GSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510
E + + K D YS+ ++L T + P DE G++ N ++E
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 118/227 (51%), Gaps = 23/227 (10%)
Query: 299 LGSGGFGSVYKG-ILSDGTTVAIKIFNL-------QLEQAFRSFNSECEVLRNVRHRNLI 350
+G GGFG V+KG ++ D + VAIK L ++ + F+ F E ++ N+ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ N +V+EF+P G L L + +L +M+D+AL +EY+ + +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN-QNP 143
Query: 411 PVVHCDLKPSNILL---DEN--MVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF- 464
P+VH DL+ NI L DEN + A V+DFG S+ + SV + + +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---QSVHSV--SGLLGNFQWMAPETI 198
Query: 465 -GSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510
E + + K D YS+ ++L T + P DE G++ N ++E
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRS-----FNSECEVLRNVRHRNLIKIL 353
+G+G FG+V++ G+ VA+KI +EQ F + F E +++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKIL---MEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTP 411
+ ++V E++ GSL + L+ + + +R L++ DVA + YLH+ + P
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPP 159
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVS 471
+VH +LK N+L+D+ V DFG+S+L + + T +MAPE + +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSN 217
Query: 472 SKCDVYSYGILLLETFTRKKP 492
K DVYS+G++L E T ++P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 118/227 (51%), Gaps = 23/227 (10%)
Query: 299 LGSGGFGSVYKG-ILSDGTTVAIKIFNL-------QLEQAFRSFNSECEVLRNVRHRNLI 350
+G GGFG V+KG ++ D + VAIK L ++ + F+ F E ++ N+ H N++
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ N +V+EF+P G L L + +L +M+D+AL +EY+ + +
Sbjct: 87 KLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN-QNP 143
Query: 411 PVVHCDLKPSNILL---DEN--MVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF- 464
P+VH DL+ NI L DEN + A V+DF +S+ + SV + + +MAPE
Sbjct: 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---QSVHSV--SGLLGNFQWMAPETI 198
Query: 465 -GSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510
E + + K D YS+ ++L T + P DE G++ N ++E
Sbjct: 199 GAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 130/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++EF+P GSL ++L H D L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 249
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 250 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 130/287 (45%), Gaps = 24/287 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 132
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 192
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 193 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 244
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572
N R D C I+ + +C +QR +D A ++ +IRD+
Sbjct: 245 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 131/292 (44%), Gaps = 36/292 (12%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 165
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 225
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMF-------TGEMNLKNWVKESLPHGLPKIA 519
S DV+S+G++L E FT K P E G+M + + ++
Sbjct: 226 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE----------- 274
Query: 520 DANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571
LL+ C I+ + +C +QR +D A ++ +IRD+
Sbjct: 275 ---LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 134
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 246
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 247 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 152
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 264
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 265 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 309
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 133
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 193
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 194 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 245
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 246 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 290
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 139
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 199
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 200 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 251
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 252 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 296
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 141
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 201
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 202 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 253
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 254 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 298
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 138
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 198
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 199 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 250
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 251 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 295
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 134
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 194
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 246
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 247 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 249
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 250 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 152
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 212
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 213 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 264
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 265 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 309
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L +H D L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 197
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 198 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 249
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 250 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 129/281 (45%), Gaps = 32/281 (11%)
Query: 297 NLLGSGGFGSVYKGILSDGT-----TVAIKIFNLQLEQAFR-SFNSECEVLRNVRHRNLI 350
++G+G FG VYKG+L + VAIK + R F E ++ H N+I
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
++ ++ E+M NG+LDK+L + + + ++ +A ++YL + +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN-- 167
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG--YMAPEFGSEG 468
VH DL NIL++ N+V VSDFG+S++L E D T + I + APE S
Sbjct: 168 -YVHRDLAARNILVNSNLVCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 469 NVSSKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREE 527
+S DV+S+GI++ E T ++P E+ E+ + I D L
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV-------------MKAINDGFRL--- 269
Query: 528 NFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
MDC +I+ L + C + +R D + L K+
Sbjct: 270 ---PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 36/291 (12%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 140
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKF 200
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMF-------TGEMNLKNWVKESLPHGLPKIA 519
S DV+S+G++L E FT K P E G+M + + ++
Sbjct: 201 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE----------- 249
Query: 520 DANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
LL+ C I+ + +C +QR +D A ++ +IRD
Sbjct: 250 ---LLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 297
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 23/275 (8%)
Query: 299 LGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIKILSSC 356
+G G FG V+ G L +D T VA+K L ++ F E +L+ H N+++++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCD 416
+V+E + G +L + + L ++ D A +EYL S +H D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
L N L+ E V +SDFG+S+ +G + + + + APE + G SS+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 477 YSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
+S+GILL ETF+ + + + +V++ P++ C
Sbjct: 299 WSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLPCPEL-----------------C 340
Query: 537 LLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571
++F L C A P QR +L+ IR +
Sbjct: 341 PDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 134
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKF 194
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 195 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 246
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 247 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 359 TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V+E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 359 TNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 130
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 189
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 190 SFGILLTELTTKGR 203
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 23/275 (8%)
Query: 299 LGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIKILSSC 356
+G G FG V+ G L +D T VA+K L ++ F E +L+ H N+++++ C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCD 416
+V+E + G +L + + L ++ D A +EYL S +H D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
L N L+ E V +SDFG+S+ +G + + + + APE + G SS+ DV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 477 YSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
+S+GILL ETF+ + + + +V++ P++ C
Sbjct: 299 WSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLPCPEL-----------------C 340
Query: 537 LLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571
++F L C A P QR +L+ IR +
Sbjct: 341 PDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 359 TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V+E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 359 TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 108/236 (45%), Gaps = 17/236 (7%)
Query: 297 NLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
++G G FG V K VAIK ++ E ++F E L V H N++K+ +C
Sbjct: 15 EVVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNY--FQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
N LV+E+ GSL L+ + ++ + + + YLH ++H
Sbjct: 72 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 415 CDLKPSNILL-DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK 473
DLKP N+LL V + DFG + D T + +MAPE N S K
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
Query: 474 CDVYSYGILLLETFTRKKPTDEM----FTGEMNLKNWVKESLPHGLPKIADANLLR 525
CDV+S+GI+L E TR+KP DE+ F + N + L LPK ++ + R
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR 240
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 299 LGSGGFGSVYKGILSDGTTVAI-KIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+GSG FG+VYKG V I K+ + EQ F++F +E VLR RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQ-FQAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL----ALEYLHHGHSTPVV 413
N A+V ++ SL Y H + Q+ ++ +ID+A ++YLH + ++
Sbjct: 103 KDNL-AIVTQWCEGSSL----YKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNII 154
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE---FGSEGNV 470
H D+K +NI L E + + DFG++ + S ++ +MAPE
Sbjct: 155 HRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPF 214
Query: 471 SSKCDVYSYGILLLETFTRKKP 492
S + DVYSYGI+L E T + P
Sbjct: 215 SFQSDVYSYGIVLYELMTGELP 236
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 108/236 (45%), Gaps = 17/236 (7%)
Query: 297 NLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
++G G FG V K VAIK ++ E ++F E L V H N++K+ +C
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNY--FQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
N LV+E+ GSL L+ + ++ + + + YLH ++H
Sbjct: 71 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 415 CDLKPSNILL-DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK 473
DLKP N+LL V + DFG + D T + +MAPE N S K
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 474 CDVYSYGILLLETFTRKKPTDEM----FTGEMNLKNWVKESLPHGLPKIADANLLR 525
CDV+S+GI+L E TR+KP DE+ F + N + L LPK ++ + R
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTR 239
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
+GSG FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
LV EFM +G L +L + L + +DV + YL V+H DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---SVIHRDLA 130
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+ EN V VSDFG+++ + + D T T + + +PE S SSK DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 479 YGILLLETFTRKK 491
+G+L+ E F+ K
Sbjct: 190 FGVLMWEVFSEGK 202
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 359 TNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 133
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 192
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 193 SFGILLTELTTKGR 206
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K E+ R F E E+L++++H N++K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 354 SSCCNTNFK--ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
C + + L++E++P GSL +L H D L + +EYL +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 135
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNV 470
+H +L NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKF 195
Query: 471 SSKCDVYSYGILLLETFT----RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
S DV+S+G++L E FT K P E N K G + L +
Sbjct: 196 SVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK--------QGQMIVFHLIELLK 247
Query: 527 ENFFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570
N R D C I+ + +C +QR +D A ++ +IRD
Sbjct: 248 NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 292
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E+M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGY 168
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+S++L + ++ T I + +PE + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 269
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 316
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
+GSG FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
LV EFM +G L +L + L + +DV + YL V+H DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 128
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+ EN V VSDFG+++ + + D T T + + +PE S SSK DV+S
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 479 YGILLLETFTRKK 491
+G+L+ E F+ K
Sbjct: 188 FGVLMWEVFSEGK 200
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E+M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGY 168
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+S++L + ++ T I + +PE + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 269
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 316
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
+GSG FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
LV EFM +G L +L + L + +DV + YL V+H DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 133
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+ EN V VSDFG+++ + + D T T + + +PE S SSK DV+S
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 479 YGILLLETFTRKK 491
+G+L+ E F+ K
Sbjct: 193 FGVLMWEVFSEGK 205
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E+M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGY 168
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+S++L + ++ T I + +PE + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 269
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 316
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E+M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGY 168
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+S++L + ++ T I + +PE + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 269
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 316
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 359 TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 131
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 190
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 191 SFGILLTELTTKGR 204
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 359 TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
+GSG FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
LV EFM +G L +L + L + +DV + YL V+H DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 130
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+ EN V VSDFG+++ + + D T T + + +PE S SSK DV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 479 YGILLLETFTRKK 491
+G+L+ E F+ K
Sbjct: 190 FGVLMWEVFSEGK 202
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 33/292 (11%)
Query: 297 NLLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIK 351
++G+G FG V G L +VAIK + E+ R F E ++ H N+I+
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ + +V E+M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMG 155
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNV 470
VH DL NIL++ N+V VSDFG+S++L + ++ T I + +PE +
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 215
Query: 471 SSKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENF 529
+S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 216 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYR 256
Query: 530 FSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 257 LPPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 304
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 109
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E+M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGY 166
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+S++L + ++ T I + +PE + +
Sbjct: 167 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 226
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 227 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 267
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 268 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 314
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E+M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGY 139
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+S++L + ++ T I + +PE + +
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 200 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 240
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 241 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 287
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E+M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGF 168
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+S++L + ++ T I + +PE + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 269
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 316
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 359 TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 85 EPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 359 TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 74 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 129
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 188
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 189 SFGILLTELTTKGR 202
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
+GSG FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
LV EFM +G L +L + L + +DV + YL V+H DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 131
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+ EN V VSDFG+++ + + D T T + + +PE S SSK DV+S
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 479 YGILLLETFTRKK 491
+G+L+ E F+ K
Sbjct: 191 FGVLMWEVFSEGK 203
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 359 TNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 306
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 365
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 366 SFGILLTELTTKGR 379
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
+GSG FG V+ G + VAIK + + F E EV+ + H L+++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
LV EFM +G L +L + L + +DV + YL V+H DL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 150
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+ EN V VSDFG+++ + + D T T + + +PE S SSK DV+S
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 479 YGILLLETFTRKK 491
+G+L+ E F+ K
Sbjct: 210 FGVLMWEVFSEGK 222
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 359 TNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 251 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 306
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 365
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 366 SFGILLTELTTKGR 379
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 13/197 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
LG G FG V+ G + T VAIK N+ E +F E +V++ +RH L+++ +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE----AFLQEAQVMKKLRHEKLVQLYAV 248
Query: 356 CCNTNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+V E+M GSL +L + +P +++ +A + Y+ + VH
Sbjct: 249 VSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 304
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKC 474
DL+ +NIL+ EN+V V+DFG+ +L+ + + + Q I + APE G + K
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKS 363
Query: 475 DVYSYGILLLETFTRKK 491
DV+S+GILL E T+ +
Sbjct: 364 DVWSFGILLTELTTKGR 380
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 359 TNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDL 137
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 196
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 197 SFGILLTELTTKGR 210
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 359 TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V+E+M G L +L + +P +++ +A + Y+ + VH DL
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 359 TNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 82 EPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDL 137
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 196
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 197 SFGILLTELTTKGR 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 359 TNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 334 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 389
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 448
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 449 SFGILLTELTTKGR 462
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E+M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGY 168
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG++++L + ++ T I + +PE + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 269
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 316
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 359 TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGA 168
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+S++L + ++ T I + +PE + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 269
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 316
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E+M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGY 168
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+ ++L + ++ T I + +PE + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 269
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 316
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 359 TNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L + +P +++ +A + Y+ + VH DL
Sbjct: 251 EPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 306
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 365
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 366 SFGILLTELTTKGR 379
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGY 168
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+S++L + ++ T I + +PE + +
Sbjct: 169 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 228
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 229 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 269
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 316
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 33/291 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L +VAIK + E+ R F E ++ H N+I++
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E M NGSLD +L H+ + + ++ +A ++YL
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGY 139
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+S++L + ++ T I + +PE + +
Sbjct: 140 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFT 199
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI+L E + ++P EM ++ + E
Sbjct: 200 SASDVWSYGIVLWEVMSYGERPYWEMSNQDV-------------------IKAVDEGYRL 240
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
MDC +++ L LDC + + R + ++ I DK + + +L++
Sbjct: 241 PPPMDCPAALYQLMLDCWQKDRNNRPKFE----QIVSILDKLIRNPGSLKI 287
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG G FG V+ G + T VAIK + +F E +V++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 359 TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M G L +L + +P +++ +A + Y+ + VH DL
Sbjct: 85 EPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 140
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ EN+V V+DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 478 SYGILLLETFTRKK 491
S+GILL E T+ +
Sbjct: 200 SFGILLTELTTKGR 213
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 33/289 (11%)
Query: 297 NLLGSGGFGSVYKGILS--DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIK 351
++G+G FG V G L VA+ I L++ E+ R F E ++ H N++
Sbjct: 49 RVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ +V+EFM NG+LD +L H+ + + ++ +A + YL
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLA---DMG 165
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG--YMAPEFGSEGN 469
VH DL NIL++ N+V VSDFG+S+++ E D + T T I + APE
Sbjct: 166 YVHRDLAARNILVNSNLVCKVSDFGLSRVI-EDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 470 VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENF 529
+S DV+SYGI++ E + E +M+ ++ +K + E
Sbjct: 225 FTSASDVWSYGIVMWEVMS----YGERPYWDMSNQDVIK--------------AIEEGYR 266
Query: 530 FSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANT 578
A MDC + L LDC + +R + ++ I DK + + N+
Sbjct: 267 LPAPMDCPAGLHQLMLDCWQKERAERPKFE----QIVGILDKMIRNPNS 311
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 49/293 (16%)
Query: 299 LGSGGFGSVYKGIL------SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKI 352
LG G FG V+ D VA+K + A + F+ E E+L N++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-----------------LNIMI 395
C + +V E+M +G L+K+L +H PD L+I
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHG-----PDAVLMAEGNPPTELTQSQMLHIAQ 135
Query: 396 DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA 455
+A + YL H VH DL N L+ EN++ + DFG+S+ + D + T+
Sbjct: 136 QIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTML 192
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGL 515
I +M PE +++ DV+S G++L E FT K + W + S +
Sbjct: 193 PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK------------QPWYQLSNNEVI 240
Query: 516 PKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
I +L+ C ++ L L C P R +K T L+ +
Sbjct: 241 ECITQGRVLQRPR------TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 131/293 (44%), Gaps = 35/293 (11%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V +G L + VAIK E+ R F SE ++ H N+I++
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRL 82
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
N+ ++ EFM NG+LD +L ++ + + ++ +A + YL
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MSY 139
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA---TIGYMAPEFGSEGN 469
VH DL NIL++ N+V VSDFG+S+ L E +T ++ I + APE +
Sbjct: 140 VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK 199
Query: 470 VSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREEN 528
+S D +SYGI++ E + ++P +M ++ N + ++
Sbjct: 200 FTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV-------------------INAIEQDY 240
Query: 529 FFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
DC S+ L LDC + + R + L DK + + +L++
Sbjct: 241 RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL----DKMIRNPASLKI 289
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 27/275 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LGSG FG V G VA+K+ + + F E + + + H L+K C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
+V E++ NG L +L SH + L + DV + +L S +H DL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLA 131
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+D ++ VSDFG+++ + + D V T + + APE SSK DV++
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWA 190
Query: 479 YGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGL--PKIADANLLREENFFSARMDC 536
+GIL+ E F+ K +++T N + +K S H L P +A
Sbjct: 191 FGILMWEVFSLGKMPYDLYT---NSEVVLKVSQGHRLYRPHLASD--------------- 232
Query: 537 LLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571
+I+ + C ELP++R + + ++ +R+K
Sbjct: 233 --TIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 119/288 (41%), Gaps = 52/288 (18%)
Query: 299 LGSGGFGSVYKG------ILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKI 352
LG G FG V+ D VA+K A + F E E+L N++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--------------------LN 392
C + + +V E+M +G L+K+L +H PD L+
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHG-----PDAMILVDGQPRQAKGELGLSQMLH 137
Query: 393 IMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTM 452
I +A + YL H VH DL N L+ N++ + DFG+S+ + D +
Sbjct: 138 IASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGH 194
Query: 453 TIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLP 512
T+ I +M PE +++ DV+S+G++L E FT K + W + S
Sbjct: 195 TMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK------------QPWFQLSNT 242
Query: 513 HGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKD 560
+ I +L C ++ + L C P QRL +K+
Sbjct: 243 EVIECITQGRVLERPRV------CPKEVYDVMLGCWQREPQQRLNIKE 284
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 123/291 (42%), Gaps = 33/291 (11%)
Query: 297 NLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIK 351
++GSG G V G L VAIK E+ R F SE ++ H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ +V E+M NGSLD +L +H+ I + ++ V + YL
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLG 171
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNV 470
VH DL N+L+D N+V VSDFG+S++L + D+ T I + APE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTF 231
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENF- 529
SS DV+S+G+++ E GE N + + EE +
Sbjct: 232 SSASDVWSFGVVMWEVLA---------YGERPYWNMTNRDVISSV----------EEGYR 272
Query: 530 FSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLR 580
A M C ++ L LDC + QR +++ + D + +LR
Sbjct: 273 LPAPMGCPHALHQLMLDCWHKDRAQRPRF----SQIVSVLDALIRSPESLR 319
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 114/227 (50%), Gaps = 28/227 (12%)
Query: 299 LGSGGFGSVYKGILSDGT----TVAIKIFNL---QLEQAFRSFNSECEVLRNVRHRNLIK 351
LG GG +VY L++ T VAIK + + E+ + F E + H+N++
Sbjct: 19 LGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVA-LALEYLHHGHST 410
++ + LV+E++ +L +++ SH P ++ I+ L+ + H H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDM 130
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQT-MTIATIGYMAPEFGSEGN 469
+VH D+KP NIL+D N + DFGI+K L E S+ QT + T+ Y +PE ++G
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET--SLTQTNHVLGTVQYFSPE-QAKGE 187
Query: 470 VSSKC-DVYSYGILLLETFTRKKPTDEMFTGEMNLK---NWVKESLP 512
+ +C D+YS GI+L E + P F GE + +++S+P
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPP----FNGETAVSIAIKHIQDSVP 230
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 123/291 (42%), Gaps = 33/291 (11%)
Query: 297 NLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIK 351
++GSG G V G L VAIK E+ R F SE ++ H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ +V E+M NGSLD +L +H+ I + ++ V + YL
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLG 171
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNV 470
VH DL N+L+D N+V VSDFG+S++L + D+ T I + APE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF 231
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENF- 529
SS DV+S+G+++ E GE N + + EE +
Sbjct: 232 SSASDVWSFGVVMWEVLA---------YGERPYWNMTNRDVISSV----------EEGYR 272
Query: 530 FSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLR 580
A M C ++ L LDC + QR +++ + D + +LR
Sbjct: 273 LPAPMGCPHALHQLMLDCWHKDRAQRPRF----SQIVSVLDALIRSPESLR 319
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 297 NLLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIK 351
++G+G FG V G L VAIK E+ R F SE ++ H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ + ++ EFM NGSLD +L ++ + + ++ +A ++YL +
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--- 155
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA-----TIGYMAPEFGS 466
VH DL NIL++ N+V VSDFG+S+ L DD+ T T A I + APE
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 467 EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526
+S DV+SYGI++ E M GE + + + N + +
Sbjct: 214 YRKFTSASDVWSYGIVMWEV---------MSYGERPYWDMTNQDV---------INAIEQ 255
Query: 527 ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLR 580
+ MDC ++ L LDC + + R L DK + + N+L+
Sbjct: 256 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL----DKMIRNPNSLK 305
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G FG VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 74
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 190 KSDVWAFGVLLWEIAT 205
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 35/294 (11%)
Query: 297 NLLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIK 351
++G+G FG V +G L + VAIK E+ R F SE ++ H N+I+
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ N+ ++ EFM NG+LD +L ++ + + ++ +A + YL
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MS 136
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA---TIGYMAPEFGSEG 468
VH DL NIL++ N+V VSDFG+S+ L E T ++ I + APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 469 NVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREE 527
+S D +SYGI++ E + ++P +M ++ N + ++
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV-------------------INAIEQD 237
Query: 528 NFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLRL 581
DC S+ L LDC + + R + L DK + + +L++
Sbjct: 238 YRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSAL----DKMIRNPASLKI 287
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 74
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C +++EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 190 KSDVWAFGVLLWEIAT 205
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 110/209 (52%), Gaps = 19/209 (9%)
Query: 297 NLLGSGGFGSVYKGIL--SDGTTVAIKIFNLQL----EQAFRSFNSECEVLRNVRHRNLI 350
+LG G FGSV +G L DGT++ + + ++L ++ F SE +++ H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 351 KILSSCCNTNFKAL-----VLEFMPNGSLDKWL-YS--HNYFQDIPDR--LNIMIDVALA 400
++L C + + + +L FM G L +L YS + IP + L M+D+AL
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 460
+EYL + + +H DL N +L ++M V+DFG+SK + GD + + ++
Sbjct: 160 MEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 461 APEFGSEGNVSSKCDVYSYGILLLETFTR 489
A E ++ +SK DV+++G+ + E TR
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 298 LLGSGGFGSVYKGILSDGTTVAIKIF----NLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
++G GGFG VY+ G VA+K + + Q + E ++ ++H N+I +
Sbjct: 14 IIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
C LV+EF G L++ L DI +N + +A + YLH P++
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI--LVNWAVQIARGMNYLHDEAIVPII 130
Query: 414 HCDLKPSNILLDE--------NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
H DLK SNIL+ + N + ++DFG+++ + +MAPE
Sbjct: 131 HRDLKSSNILILQKVENGDLSNKILKITDFGLAREW----HRTTKMSAAGAYAWMAPEVI 186
Query: 466 SEGNVSSKCDVYSYGILLLETFTRKKP 492
S DV+SYG+LL E T + P
Sbjct: 187 RASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C +++EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VAIK + SF E ++++ ++H L+++ +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 359 TNFKALVLEFMPNGSLDKWLY-SHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+V E+M GSL +L +P+ +++ VA + Y+ + +H DL
Sbjct: 76 EPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDL 131
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ ++ ++DFG+++L+ + + + Q I + APE G + K DV+
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 190
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T+ + P M E V E + G DC
Sbjct: 191 SFGILLTELVTKGRVPYPGMNNRE------VLEQVERGY-------------RMPCPQDC 231
Query: 537 LLSIFHLALDCCAELPDQR 555
+S+ L + C + P++R
Sbjct: 232 PISLHELMIHCWKKDPEER 250
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 77
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C +++EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 133
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSI 192
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 193 KSDVWAFGVLLWEIAT 208
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C +++EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 279 RRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNS 336
RR S D E +GSG FG+VYKG VA+K+ N+ Q ++F +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 81
Query: 337 ECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMID 396
E VLR RH N++ + A+V ++ S LY H + + + +ID
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSS----LYHHLHIIETKFEMIKLID 136
Query: 397 VAL----ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTM 452
+A ++YL H+ ++H DLK +NI L E++ + DFG++ + S
Sbjct: 137 IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 193
Query: 453 TIATIGYMAPE---FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
+I +MAPE + S + DVY++GI+L E T + P
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 19/223 (8%)
Query: 279 RRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNS 336
RR S D E +GSG FG+VYKG VA+K+ N+ Q ++F +
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 80
Query: 337 ECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMID 396
E VLR RH N++ + A+V ++ S LY H + + + +ID
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSS----LYHHLHIIETKFEMIKLID 135
Query: 397 VAL----ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTM 452
+A ++YL H+ ++H DLK +NI L E++ + DFG++ + S
Sbjct: 136 IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 192
Query: 453 TIATIGYMAPE---FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
+I +MAPE + S + DVY++GI+L E T + P
Sbjct: 193 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 81
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C +++EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 32/284 (11%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTT----VAIKIFNLQL-EQAFRSFNSECEVLRNVRH 346
+LGSG FG+VYKGI + +G T VAIKI N +A F E ++ ++ H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+L+++L C + + LV + MP+G L ++++ H LN + +A + YL
Sbjct: 100 PHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 158
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQT-MTIATIGYMAPEFG 465
+VH DL N+L+ ++DFG+++LL EGD+ I +MA E
Sbjct: 159 RR---LVHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMPIKWMALECI 214
Query: 466 SEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524
+ + DV+SYG+ + E T KP D G+P +LL
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTFGGKPYD-------------------GIPTREIPDLL 255
Query: 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
+ C + ++ + + C D R K+ A + ++
Sbjct: 256 EKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 13/195 (6%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 95
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-IDVALALEYLHHGHSTPVV 413
C +V E+MP G+L +L N + L M ++ A+EYL + +
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN---FI 152
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK 473
H DL N L+ EN V V+DFG+S+L+ GD I + APE + S K
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 474 CDVYSYGILLLETFT 488
DV+++G+LL E T
Sbjct: 212 SDVWAFGVLLWEIAT 226
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 81
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN---F 137
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 81
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 118/295 (40%), Gaps = 51/295 (17%)
Query: 299 LGSGGFGSVYKGIL------SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKI 352
LG G FG V+ D VA+K E A + F E E+L ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-------------------LNI 393
C +V E+M +G L+++L SH PD L +
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHG-----PDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
VA + YL H VH DL N L+ + +V + DFG+S+ + D + T
Sbjct: 135 ASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 191
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ I +M PE +++ DV+S+G++L E FT K + W + S
Sbjct: 192 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQLSNTE 239
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
+ I L C ++ + C P QR +KD +L+ +
Sbjct: 240 AIDCITQGRELERPR------ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 118/295 (40%), Gaps = 51/295 (17%)
Query: 299 LGSGGFGSVYKGIL------SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKI 352
LG G FG V+ D VA+K E A + F E E+L ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-------------------LNI 393
C +V E+M +G L+++L SH PD L +
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHG-----PDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
VA + YL H VH DL N L+ + +V + DFG+S+ + D + T
Sbjct: 141 ASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 197
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ I +M PE +++ DV+S+G++L E FT K + W + S
Sbjct: 198 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQLSNTE 245
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
+ I L C ++ + C P QR +KD +L+ +
Sbjct: 246 AIDCITQGRELERPR------ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 118/295 (40%), Gaps = 51/295 (17%)
Query: 299 LGSGGFGSVYKGIL------SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKI 352
LG G FG V+ D VA+K E A + F E E+L ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-------------------LNI 393
C +V E+M +G L+++L SH PD L +
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHG-----PDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
VA + YL H VH DL N L+ + +V + DFG+S+ + D + T
Sbjct: 164 ASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ I +M PE +++ DV+S+G++L E FT K + W + S
Sbjct: 221 MLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQLSNTE 268
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
+ I L C ++ + C P QR +KD +L+ +
Sbjct: 269 AIDCITQGRELERPR------ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 132
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 74
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 75 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 190 KSDVWAFGVLLWEIAT 205
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 81
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 80
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 136
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 195
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 196 KSDVWAFGVLLWEIAT 211
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 124/278 (44%), Gaps = 29/278 (10%)
Query: 298 LLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKI 352
++G+G FG V G L VAIK + E+ R F E ++ H N+I +
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +V E+M NGSLD +L ++ + + ++ ++ ++YL
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS---DMGY 145
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNVS 471
VH DL NIL++ N+V VSDFG+S++L + ++ T I + APE + +
Sbjct: 146 VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFT 205
Query: 472 SKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S DV+SYGI++ E + ++P EM ++ + E
Sbjct: 206 SASDVWSYGIVMWEVVSYGERPYWEMTNQDV-------------------IKAVEEGYRL 246
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
+ MDC +++ L LDC + + R + L K+
Sbjct: 247 PSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 127/284 (44%), Gaps = 32/284 (11%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTT----VAIKIFNLQL-EQAFRSFNSECEVLRNVRH 346
+LGSG FG+VYKGI + +G T VAIKI N +A F E ++ ++ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+L+++L C + + LV + MP+G L ++++ H LN + +A + YL
Sbjct: 77 PHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 135
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQT-MTIATIGYMAPEFG 465
+VH DL N+L+ ++DFG+++LL EGD+ I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMPIKWMALECI 191
Query: 466 SEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524
+ + DV+SYG+ + E T KP D G+P +LL
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYD-------------------GIPTREIPDLL 232
Query: 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
+ C + ++ + + C D R K+ A + ++
Sbjct: 233 EKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 276
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 279 RRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNS 336
RR S D E +GSG FG+VYKG VA+K+ N+ Q ++F +
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 73
Query: 337 ECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMID 396
E VLR RH N++ + A+V ++ S LY H + + + +ID
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSS----LYHHLHIIETKFEMIKLID 128
Query: 397 VAL----ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTM 452
+A ++YL H+ ++H DLK +NI L E++ + DFG++ S
Sbjct: 129 IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 185
Query: 453 TIATIGYMAPE---FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
+I +MAPE + S + DVY++GI+L E T + P
Sbjct: 186 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 78
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 194 KSDVWAFGVLLWEIAT 209
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 19/223 (8%)
Query: 279 RRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNS 336
RR S D E +GSG FG+VYKG VA+K+ N+ Q ++F +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 81
Query: 337 ECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMID 396
E VLR RH N++ + A+V ++ S LY H + + + +ID
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSS----LYHHLHIIETKFEMIKLID 136
Query: 397 VAL----ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTM 452
+A ++YL H+ ++H DLK +NI L E++ + DFG++ S
Sbjct: 137 IARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 193
Query: 453 TIATIGYMAPE---FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
+I +MAPE + S + DVY++GI+L E T + P
Sbjct: 194 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 89
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 145
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 204
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 205 KSDVWAFGVLLWEIAT 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 76
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 132
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 191
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 192 KSDVWAFGVLLWEIAT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 81
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 196
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 197 KSDVWAFGVLLWEIAT 212
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 25/262 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
+GSG FG+VYKG VA+K+ N+ Q ++F +E VLR RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCD 416
A+V ++ SL L++ ++ ++I A ++YL H+ ++H D
Sbjct: 78 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRD 133
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE---FGSEGNVSSK 473
LK +NI L E+ + DFG++ + S +I +MAPE S +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 474 CDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSAR 533
DVY++GI+L E T + P + + ++ + SL L K+ R
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV--------------R 239
Query: 534 MDCLLSIFHLALDCCAELPDQR 555
+C + L +C + D+R
Sbjct: 240 SNCPKRMKRLMAECLKKKRDER 261
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 78
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSI 193
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 194 KSDVWAFGVLLWEIAT 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 129/295 (43%), Gaps = 39/295 (13%)
Query: 297 NLLGSGGFGSVYKGILS----DGTTVAIKIFNL-QLEQAFRSFNSECEVLRNVRHRNLIK 351
++G+G FG V G L VAIK E+ R F SE ++ H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ + ++ EFM NGSLD +L ++ + + ++ +A ++YL +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--- 129
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA-----TIGYMAPEFGS 466
VH L NIL++ N+V VSDFG+S+ L DD+ T T A I + APE
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 467 EGNVSSKCDVYSYGILLLETFTR-KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR 525
+S DV+SYGI++ E + ++P +M ++ N +
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV-------------------INAIE 228
Query: 526 EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLR 580
++ MDC ++ L LDC + + R L DK + + N+L+
Sbjct: 229 QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL----DKMIRNPNSLK 279
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 77
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 133
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSI 192
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 193 KSDVWAFGVLLWEIAT 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ + T VA+K + +F +E V++ ++H L+K L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVK-LHAVVT 80
Query: 359 TNFKALVLEFMPNGSLDKWLYS-HNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
++ EFM GSL +L S Q +P ++ +A + ++ + +H DL
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 137
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ ++V ++DFG+++++ E ++ + I + APE + G+ + K DV+
Sbjct: 138 RAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL+E T + P M E V +L G + R EN C
Sbjct: 197 SFGILLMEIVTYGRIPYPGMSNPE------VIRALERGY------RMPRPEN-------C 237
Query: 537 LLSIFHLALDCCAELPDQR 555
++++ + C P++R
Sbjct: 238 PEELYNIMMRCWKNRPEER 256
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 78
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H DL N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 194 KSDVWAFGVLLWEIAT 209
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
+GSG FG+VYKG VA+K+ N+ Q ++F +E VLR RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL----ALEYLHHGHSTPV 412
A+V ++ S LY H + + + +ID+A ++YL H+ +
Sbjct: 76 TKPQL-AIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSI 127
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE---FGSEGN 469
+H DLK +NI L E++ + DFG++ + S +I +MAPE +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 470 VSSKCDVYSYGILLLETFTRKKP 492
S + DVY++GI+L E T + P
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLP 210
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
+GSG FG+VYKG VA+K+ N+ Q ++F +E VLR RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL----ALEYLHHGHSTPV 412
A+V ++ S LY H + + + +ID+A ++YL H+ +
Sbjct: 79 TKPQL-AIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSI 130
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE---FGSEGN 469
+H DLK +NI L E++ + DFG++ + S +I +MAPE +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 470 VSSKCDVYSYGILLLETFTRKKP 492
S + DVY++GI+L E T + P
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLP 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
+GSG FG+VYKG VA+K+ N+ Q ++F +E VLR RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL----ALEYLHHGHSTPV 412
A+V ++ S LY H + + + +ID+A ++YL H+ +
Sbjct: 79 TKPQL-AIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSI 130
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE---FGSEGN 469
+H DLK +NI L E++ + DFG++ + S +I +MAPE +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 470 VSSKCDVYSYGILLLETFTRKKP 492
S + DVY++GI+L E T + P
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLP 213
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++E+ G+L ++L + Y DI D ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 261
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
+GSG FG+VYKG VA+K+ N+ Q ++F +E VLR RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL----ALEYLHHGHSTPV 412
A+V ++ S LY H + + + +ID+A ++YL H+ +
Sbjct: 74 TKPQL-AIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSI 125
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE---FGSEGN 469
+H DLK +NI L E++ + DFG++ + S +I +MAPE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 470 VSSKCDVYSYGILLLETFTRKKP 492
S + DVY++GI+L E T + P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 120/290 (41%), Gaps = 43/290 (14%)
Query: 299 LGSGGFGSVYKGIL------SDGTTVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIK 351
LG FG VYKG L VAIK + E R F E + ++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDI---------------PDRLNIMID 396
+L +++ + +G L ++L + D+ PD ++++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
+A +EYL H VVH DL N+L+ + + +SD G+ + + D + ++
Sbjct: 154 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLP 516
I +MAPE G S D++SYG++L E F+ + + G N
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL---QPYCGYSNQDV----------- 256
Query: 517 KIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLK 566
++R DC ++ L ++C E P +R KD ++L+
Sbjct: 257 ----VEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 13/192 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
+G G FG V G G VA+K ++ + ++F +E V+ +RH NL+++L
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 359 TNFK-ALVLEFMPNGSLDKWLYSHNYFQDIPD-RLNIMIDVALALEYLHHGHSTPVVHCD 416
+V E+M GSL +L S D L +DV A+EYL + VH D
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 133
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
L N+L+ E+ VA VSDFG++K + S Q + + APE E S+K DV
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKSDV 188
Query: 477 YSYGILLLETFT 488
+S+GILL E ++
Sbjct: 189 WSFGILLWEIYS 200
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 33 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA ++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 149
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 150 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 127/261 (48%), Gaps = 31/261 (11%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ + T VA+K + +F +E V++ ++H L+K L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVK-LHAVVT 253
Query: 359 TNFKALVLEFMPNGSLDKWLYS-HNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
++ EFM GSL +L S Q +P ++ +A + ++ + +H DL
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 310
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ ++V ++DFG+++++ E ++ + I + APE + G+ + K DV+
Sbjct: 311 RAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 478 SYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR--EENFFSARMD 535
S+GILL+E T + +P+ P +++ ++R E + R +
Sbjct: 370 SFGILLMEIVTYGR-------------------IPY--PGMSNPEVIRALERGYRMPRPE 408
Query: 536 -CLLSIFHLALDCCAELPDQR 555
C ++++ + C P++R
Sbjct: 409 NCPEELYNIMMRCWKNRPEER 429
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 120/290 (41%), Gaps = 43/290 (14%)
Query: 299 LGSGGFGSVYKGIL------SDGTTVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIK 351
LG FG VYKG L VAIK + E R F E + ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDI---------------PDRLNIMID 396
+L +++ + +G L ++L + D+ PD ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
+A +EYL H VVH DL N+L+ + + +SD G+ + + D + ++
Sbjct: 137 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLP 516
I +MAPE G S D++SYG++L E F+ + + G N
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL---QPYCGYSNQDV----------- 239
Query: 517 KIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLK 566
++R DC ++ L ++C E P +R KD ++L+
Sbjct: 240 ----VEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 108/269 (40%), Gaps = 49/269 (18%)
Query: 6 QLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKL 65
L I L++N L G IP + +L+ L L L N +G+IP L SL L LN+N
Sbjct: 488 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 547
Query: 66 TSSIPSALW------ALEYI-----LYV-------------------------------- 82
+IP+A++ A +I +Y+
Sbjct: 548 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTR 607
Query: 83 ---NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQG 139
N++S G + N ++ LD+S N LSG IPK I + L L+L N G
Sbjct: 608 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 667
Query: 140 PIPESFGXXXXXXXXXXXXXXXXXGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFS 199
IP+ G IP+++ AL+ L + ++S+N L G IP G F F
Sbjct: 668 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFP 727
Query: 200 AQSFHWNYALCGPQRLQVPPCKEDKNKGF 228
F N LCG +P C G+
Sbjct: 728 PAKFLNNPGLCG---YPLPRCDPSNADGY 753
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 77/140 (55%)
Query: 7 LQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLT 66
LQ + L +N G IP L L SL L N L+G+IP+ L SL+ LR+L+L N L
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 67 SSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKD 126
IP L ++ + + L N LTG + S + N L + LS N+L+G+IPK I L++
Sbjct: 453 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 512
Query: 127 LTNLSLAGNQFQGPIPESFG 146
L L L+ N F G IP G
Sbjct: 513 LAILKLSNNSFSGNIPAELG 532
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 73/141 (51%)
Query: 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNK 64
+L + L+ N+L G+IP L L +L L L N L G IP L + +L L L+ N
Sbjct: 415 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 474
Query: 65 LTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGL 124
LT IPS L + +++LS+N LTG + I ++ L L LS N SG+IP +
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 534
Query: 125 KDLTNLSLAGNQFQGPIPESF 145
+ L L L N F G IP +
Sbjct: 535 RSLIWLDLNTNLFNGTIPAAM 555
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 3 RMQQLQGIGLADNHLQGSIPYDLCQLK-RLNSLSLQGNKLNGSI-PT-CLASLTSLRELR 59
+M+ L+ + L+ N G +P L L L +L L N +G I P C +L+EL
Sbjct: 338 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 397
Query: 60 LNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPK 119
L +N T IP L ++ ++LS NYL+G++ S + ++ L DL L N L G+IP+
Sbjct: 398 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 457
Query: 120 TIAGLKDLTNLSLAGNQFQGPIPESFGXXXXXXXXXXXXXXXXXGIPKSLVALSHLKQFN 179
+ +K L L L N G IP IPK + L +L
Sbjct: 458 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 517
Query: 180 VSHNRLEGEIPTE 192
+S+N G IP E
Sbjct: 518 LSNNSFSGNIPAE 530
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 4/194 (2%)
Query: 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPT-CLASLTSLRELRL 60
G L G+ L+ NH G++P L SL+L N +G +P L + L+ L L
Sbjct: 288 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 347
Query: 61 NSNKLTSSIPSALWALEY-ILYVNLSSNYLTGSLTSDI-QNMK-VLIDLDLSRNQLSGDI 117
+ N+ + +P +L L +L ++LSSN +G + ++ QN K L +L L N +G I
Sbjct: 348 SFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI 407
Query: 118 PKTIAGLKDLTNLSLAGNQFQGPIPESFGXXXXXXXXXXXXXXXXXGIPKSLVALSHLKQ 177
P T++ +L +L L+ N G IP S G IP+ L+ + L+
Sbjct: 408 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 467
Query: 178 FNVSHNRLEGEIPT 191
+ N L GEIP+
Sbjct: 468 LILDFNDLTGEIPS 481
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRL 60
+G M L + L N + GSIP ++ L+ LN L L NKL+G IP +++LT L E+ L
Sbjct: 649 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 708
Query: 61 NSNKLTSSIP 70
++N L+ IP
Sbjct: 709 SNNNLSGPIP 718
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 3 RMQQLQGIGLADNHLQGS-----IPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRE 57
++ L+ + L+ N + G+ + D C L L++ GNK++G + ++ +L
Sbjct: 146 KLNSLEVLDLSANSISGANVVGWVLSDGC--GELKHLAISGNKISGDVD--VSRCVNLEF 201
Query: 58 LRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDI 117
L ++SN ++ IP L + ++++S N L+G + I L L++S NQ G I
Sbjct: 202 LDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 260
Query: 118 PKTIAGLKDLTNLSLAGNQFQGPIPE 143
P LK L LSLA N+F G IP+
Sbjct: 261 PPLP--LKSLQYLSLAENKFTGEIPD 284
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 13/192 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
+G G FG V G G VA+K ++ + ++F +E V+ +RH NL+++L
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 359 TNFK-ALVLEFMPNGSLDKWLYSHNYFQDIPD-RLNIMIDVALALEYLHHGHSTPVVHCD 416
+V E+M GSL +L S D L +DV A+EYL + VH D
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 127
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
L N+L+ E+ VA VSDFG++K + S Q + + APE E S+K DV
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 477 YSYGILLLETFT 488
+S+GILL E ++
Sbjct: 183 WSFGILLWEIYS 194
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 13/192 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
+G G FG V G G VA+K ++ + ++F +E V+ +RH NL+++L
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 359 TNFK-ALVLEFMPNGSLDKWLYSHNYFQDIPD-RLNIMIDVALALEYLHHGHSTPVVHCD 416
+V E+M GSL +L S D L +DV A+EYL + VH D
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 142
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
L N+L+ E+ VA VSDFG++K + S Q + + APE E S+K DV
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197
Query: 477 YSYGILLLETFT 488
+S+GILL E ++
Sbjct: 198 WSFGILLWEIYS 209
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 108/269 (40%), Gaps = 49/269 (18%)
Query: 6 QLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKL 65
L I L++N L G IP + +L+ L L L N +G+IP L SL L LN+N
Sbjct: 491 NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLF 550
Query: 66 TSSIPSALW------ALEYI-----LYV-------------------------------- 82
+IP+A++ A +I +Y+
Sbjct: 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTR 610
Query: 83 ---NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQG 139
N++S G + N ++ LD+S N LSG IPK I + L L+L N G
Sbjct: 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISG 670
Query: 140 PIPESFGXXXXXXXXXXXXXXXXXGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFS 199
IP+ G IP+++ AL+ L + ++S+N L G IP G F F
Sbjct: 671 SIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFP 730
Query: 200 AQSFHWNYALCGPQRLQVPPCKEDKNKGF 228
F N LCG +P C G+
Sbjct: 731 PAKFLNNPGLCG---YPLPRCDPSNADGY 756
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 77/140 (55%)
Query: 7 LQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLT 66
LQ + L +N G IP L L SL L N L+G+IP+ L SL+ LR+L+L N L
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 67 SSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKD 126
IP L ++ + + L N LTG + S + N L + LS N+L+G+IPK I L++
Sbjct: 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN 515
Query: 127 LTNLSLAGNQFQGPIPESFG 146
L L L+ N F G IP G
Sbjct: 516 LAILKLSNNSFSGNIPAELG 535
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 73/141 (51%)
Query: 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNK 64
+L + L+ N+L G+IP L L +L L L N L G IP L + +L L L+ N
Sbjct: 418 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477
Query: 65 LTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGL 124
LT IPS L + +++LS+N LTG + I ++ L L LS N SG+IP +
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 537
Query: 125 KDLTNLSLAGNQFQGPIPESF 145
+ L L L N F G IP +
Sbjct: 538 RSLIWLDLNTNLFNGTIPAAM 558
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 89/193 (46%), Gaps = 3/193 (1%)
Query: 3 RMQQLQGIGLADNHLQGSIPYDLCQLK-RLNSLSLQGNKLNGSI-PT-CLASLTSLRELR 59
+M+ L+ + L+ N G +P L L L +L L N +G I P C +L+EL
Sbjct: 341 KMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400
Query: 60 LNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPK 119
L +N T IP L ++ ++LS NYL+G++ S + ++ L DL L N L G+IP+
Sbjct: 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQ 460
Query: 120 TIAGLKDLTNLSLAGNQFQGPIPESFGXXXXXXXXXXXXXXXXXGIPKSLVALSHLKQFN 179
+ +K L L L N G IP IPK + L +L
Sbjct: 461 ELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520
Query: 180 VSHNRLEGEIPTE 192
+S+N G IP E
Sbjct: 521 LSNNSFSGNIPAE 533
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 4/194 (2%)
Query: 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPT-CLASLTSLRELRL 60
G L G+ L+ NH G++P L SL+L N +G +P L + L+ L L
Sbjct: 291 GACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDL 350
Query: 61 NSNKLTSSIPSALWALEY-ILYVNLSSNYLTGSLTSDI-QNMK-VLIDLDLSRNQLSGDI 117
+ N+ + +P +L L +L ++LSSN +G + ++ QN K L +L L N +G I
Sbjct: 351 SFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKI 410
Query: 118 PKTIAGLKDLTNLSLAGNQFQGPIPESFGXXXXXXXXXXXXXXXXXGIPKSLVALSHLKQ 177
P T++ +L +L L+ N G IP S G IP+ L+ + L+
Sbjct: 411 PPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLET 470
Query: 178 FNVSHNRLEGEIPT 191
+ N L GEIP+
Sbjct: 471 LILDFNDLTGEIPS 484
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRL 60
+G M L + L N + GSIP ++ L+ LN L L NKL+G IP +++LT L E+ L
Sbjct: 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDL 711
Query: 61 NSNKLTSSIP 70
++N L+ IP
Sbjct: 712 SNNNLSGPIP 721
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 12/146 (8%)
Query: 3 RMQQLQGIGLADNHLQGS-----IPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRE 57
++ L+ + L+ N + G+ + D C L L++ GNK++G + ++ +L
Sbjct: 149 KLNSLEVLDLSANSISGANVVGWVLSDGC--GELKHLAISGNKISGDVD--VSRCVNLEF 204
Query: 58 LRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDI 117
L ++SN ++ IP L + ++++S N L+G + I L L++S NQ G I
Sbjct: 205 LDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPI 263
Query: 118 PKTIAGLKDLTNLSLAGNQFQGPIPE 143
P LK L LSLA N+F G IP+
Sbjct: 264 PPLP--LKSLQYLSLAENKFTGEIPD 287
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
+GSG FG+VYKG VA+K+ N+ Q ++F +E VLR RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL----ALEYLHHGHSTPV 412
A+V ++ S LY H + + + +ID+A ++YL H+ +
Sbjct: 74 TAPQL-AIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSI 125
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE---FGSEGN 469
+H DLK +NI L E++ + DFG++ + S +I +MAPE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 470 VSSKCDVYSYGILLLETFTRKKP 492
S + DVY++GI+L E T + P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 25/262 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
+GSG FG+VYKG VA+K+ N+ Q ++F +E VLR RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCD 416
A+V ++ SL L++ ++ ++I A ++YL H+ ++H D
Sbjct: 90 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRD 145
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE---FGSEGNVSSK 473
LK +NI L E+ + DFG++ S +I +MAPE S +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 474 CDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSAR 533
DVY++GI+L E T + P + + ++ + SL L K+ R
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV--------------R 251
Query: 534 MDCLLSIFHLALDCCAELPDQR 555
+C + L +C + D+R
Sbjct: 252 SNCPKRMKRLMAECLKKKRDER 273
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++E+ G+L ++L + Y DI D ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 261
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++E+ G+L ++L + Y DI D ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 261
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 13/192 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
+G G FG V G G VA+K ++ + ++F +E V+ +RH NL+++L
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 359 TNFK-ALVLEFMPNGSLDKWLYSHNYFQDIPD-RLNIMIDVALALEYLHHGHSTPVVHCD 416
+V E+M GSL +L S D L +DV A+EYL + VH D
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 314
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
L N+L+ E+ VA VSDFG++K + S Q + + APE E S+K DV
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 369
Query: 477 YSYGILLLETFT 488
+S+GILL E ++
Sbjct: 370 WSFGILLWEIYS 381
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 283
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKN---F 339
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H +L N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 398
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 399 KSDVWAFGVLLWEIAT 414
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 25/262 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
+GSG FG+VYKG VA+K+ N+ Q ++F +E VLR RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCD 416
A+V ++ SL L++ ++ ++I A ++YL H+ ++H D
Sbjct: 90 TAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRD 145
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE---FGSEGNVSSK 473
LK +NI L E+ + DFG++ S +I +MAPE S +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 474 CDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSAR 533
DVY++GI+L E T + P + + ++ + SL L K+ R
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKV--------------R 251
Query: 534 MDCLLSIFHLALDCCAELPDQR 555
+C + L +C + D+R
Sbjct: 252 SNCPKRMKRLMAECLKKKRDER 273
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++E+ G+L ++L + Y DI D ++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 261
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++E+ G+L ++L + Y DI D ++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 261
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
+GSG FG+VYKG VA+K+ N+ Q ++F +E VLR RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL----ALEYLHHGHSTPV 412
A+V ++ S LY H + + + +ID+A ++YL H+ +
Sbjct: 74 TKPQL-AIVTQWCEGSS----LYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSI 125
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE---FGSEGN 469
+H DLK +NI L E++ + DFG++ S +I +MAPE +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 470 VSSKCDVYSYGILLLETFTRKKP 492
S + DVY++GI+L E T + P
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 143
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 144 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 203 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 243
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 244 PEELYQLMRLCWKERPEDR 262
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 31 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA ++YL
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 147
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 148 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 32 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA ++YL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 148
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 149 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 26 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA ++YL
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 142
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 143 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA ++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 150
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 52 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA ++YL
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 168
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 169 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 53 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA ++YL
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 169
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 170 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 144
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 145 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 204 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 244
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 245 PEELYQLMRLCWKERPEDR 263
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++E+ G+L ++L + Y DI D ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 261
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 33 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA ++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 149
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 150 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 201 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 241
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 242 PEELYQLMRLCWKERPEDR 260
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 29 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA ++YL
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 145
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 146 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 235
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 236 PEELYQLMRLCWKERPEDR 254
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V G VAIK+ + + F E +V+ N+ H L+++ C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
++ E+M NG L +L + L + DV A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 147
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+++ V VSDFG+S+ + + D+ + + + PE SSK D+++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLD-DEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 479 YGILLLETFTRKKPTDEMFT 498
+G+L+ E ++ K E FT
Sbjct: 207 FGVLMWEIYSLGKMPYERFT 226
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA ++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 150
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 280
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 336
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H +L N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 395
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 396 KSDVWAFGVLLWEIAT 411
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 137
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 138 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 197 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 237
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 238 PEELYQLMRLCWKERPEDR 256
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 101/196 (51%), Gaps = 15/196 (7%)
Query: 299 LGSGGFGSVYKGILSDGT-TVAIKIF---NLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G +G VY+G+ + TVA+K +++E+ F E V++ ++H NL+++L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----FLKEAAVMKEIKHPNLVQLLG 322
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHSTPV 412
C ++ EFM G+L +L N Q++ L + ++ A+EYL +
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKN---F 378
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
+H +L N L+ EN + V+DFG+S+L+ GD I + APE + S
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSI 437
Query: 473 KCDVYSYGILLLETFT 488
K DV+++G+LL E T
Sbjct: 438 KSDVWAFGVLLWEIAT 453
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G ++ T VA+K + ++F E +++ ++H L+++ +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDI-PDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
++ E+M GSL +L S + + P ++ +A + Y+ + +H DL
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 136
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +N+L+ E+++ ++DFG+++++ E ++ + I + APE + G + K DV+
Sbjct: 137 RAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 478 SYGILLLETFTRKK 491
S+GILL E T K
Sbjct: 196 SFGILLYEIVTYGK 209
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 201 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 241
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 242 PEELYQLMRLCWKERPEDR 260
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 235
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 236 PEELYQLMRLCWKERPEDR 254
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 136
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 137 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 196 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 236
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 237 PEELYQLMRLCWKERPEDR 255
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 140
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 141 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 199
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 200 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 240
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 241 PEELYQLMRLCWKERPEDR 259
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++E+ G+L ++L + Y DI D ++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 209 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 307
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 308 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 145
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 146 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 204
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 205 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 245
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 246 PEELYQLMRLCWKERPEDR 264
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 127/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWL-----------YSHNYFQD----IPDRLNI 393
+I +L +C +++E+ G+L ++L Y N + D ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 261
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 235
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 236 PEELYQLMRLCWKERPEDR 254
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V G VAIK+ + + F E +V+ N+ H L+++ C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
++ E+M NG L +L + L + DV A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 147
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+++ V VSDFG+S+ + + D+ + + + PE SSK D+++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 479 YGILLLETFTRKKPTDEMFT 498
+G+L+ E ++ K E FT
Sbjct: 207 FGVLMWEIYSLGKMPYERFT 226
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V G VAIK+ + + F E +V+ N+ H L+++ C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
++ E+M NG L +L + L + DV A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 132
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+++ V VSDFG+S+ + + D+ + + + PE SSK D+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 479 YGILLLETFTRKKPTDEMFT 498
+G+L+ E ++ K E FT
Sbjct: 192 FGVLMWEIYSLGKMPYERFT 211
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++E+ G+L ++L + Y DI D ++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 152 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 250
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 251 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++E+ G+L ++L + Y DI D ++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 155 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 253
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 254 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V G VAIK+ + + F E +V+ N+ H L+++ C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
++ E+M NG L +L + L + DV A+EYL S +H DL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 127
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+++ V VSDFG+S+ + + D+ + + + PE SSK D+++
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 479 YGILLLETFTRKKPTDEMFT 498
+G+L+ E ++ K E FT
Sbjct: 187 FGVLMWEIYSLGKMPYERFT 206
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V G VAIK+ + + F E +V+ N+ H L+++ C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
++ E+M NG L +L + L + DV A+EYL S +H DL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 131
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+++ V VSDFG+S+ + + D+ + + + PE SSK D+++
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 479 YGILLLETFTRKKPTDEMFT 498
+G+L+ E ++ K E FT
Sbjct: 191 FGVLMWEIYSLGKMPYERFT 210
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++E+ G+L ++L + Y DI D ++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 150 TYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 248
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 249 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V G VAIK+ + + F E +V+ N+ H L+++ C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
++ E+M NG L +L + L + DV A+EYL S +H DL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 138
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+++ V VSDFG+S+ + + D+ + + + PE SSK D+++
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 197
Query: 479 YGILLLETFTRKKPTDEMFT 498
+G+L+ E ++ K E FT
Sbjct: 198 FGVLMWEIYSLGKMPYERFT 217
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 130
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 131 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 190 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 230
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 231 PEELYQLMRLCWKERPEDR 249
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 103/194 (53%), Gaps = 6/194 (3%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G ++ T VA+K + ++F E +++ ++H L+++ +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDI-PDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
++ EFM GSL +L S + + P ++ +A + Y+ + +H DL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 135
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +N+L+ E+++ ++DFG+++++ E ++ + I + APE + G + K +V+
Sbjct: 136 RAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 478 SYGILLLETFTRKK 491
S+GILL E T K
Sbjct: 195 SFGILLYEIVTYGK 208
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V G VAIK+ + + F E +V+ N+ H L+++ C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418
++ E+M NG L +L + L + DV A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 132
Query: 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYS 478
N L+++ V VSDFG+S+ + + D+ + + + PE SSK D+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 479 YGILLLETFTRKKPTDEMFT 498
+G+L+ E ++ K E FT
Sbjct: 192 FGVLMWEIYSLGKMPYERFT 211
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-----QAFRSFNSECEVLRNVRH 346
+ +LGSG FG+V+KG+ + +G ++ I + +E Q+F++ + ++ H
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH- 405
+++++L C ++ + LV +++P GSL + H LN + +A + YL
Sbjct: 75 AHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
HG +VH +L N+LL V+DFG++ LL D ++ + I +MA E
Sbjct: 134 HG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 466 SEGNVSSKCDVYSYGILLLETFT 488
G + + DV+SYG+ + E T
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 125/290 (43%), Gaps = 31/290 (10%)
Query: 297 NLLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIK 351
++G G FG V G L VAIK ++ R F SE ++ H N+I
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ ++ E+M NGSLD +L ++ + + ++ + ++YL
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 151
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNV 470
VH DL NIL++ N+V VSDFG+S++L + ++ T I + APE +
Sbjct: 152 AVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
+S DV+SYGI++ E + E +M+ ++ +K + E
Sbjct: 212 TSASDVWSYGIVMWEVMS----YGERPYWDMSNQDVIKA--------------IEEGYRL 253
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLR 580
MDC +++ L LDC + R L DK + + N+L+
Sbjct: 254 PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML----DKLIRNPNSLK 299
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 35 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA +++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 151
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISK-LLGEGDDSVI-QTMTIATIGYMAPEF 464
S VH DL N +LDE V+DFG+++ +L + DSV +T + +MA E
Sbjct: 152 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-----QAFRSFNSECEVLRNVRH 346
+ +LGSG FG+V+KG+ + +G ++ I + +E Q+F++ + ++ H
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH- 405
+++++L C ++ + LV +++P GSL + H LN + +A + YL
Sbjct: 93 AHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
HG +VH +L N+LL V+DFG++ LL D ++ + I +MA E
Sbjct: 152 HG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 466 SEGNVSSKCDVYSYGILLLETFT 488
G + + DV+SYG+ + E T
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 39 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA +++L
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 155
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 156 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA +++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 150
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA +++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 150
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 93 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA +++L
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 209
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 210 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 35 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA +++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 151
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 152 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTV--AIKIFNLQLEQA-FRSFNSECEVLRNVRHR 347
FNE ++G G FG VY G L +DG + A+K N + F +E ++++ H
Sbjct: 32 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 348 NLIKILSSCCNTNFKALV-LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++ +L C + LV L +M +G L ++ + + + D + + VA +++L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 148
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEF 464
S VH DL N +LDE V+DFG+++ + + + + T A + +MA E
Sbjct: 149 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 299 LGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIKI---- 352
LG+GGFG V + I D G VAIK +L R + E ++++ + H N++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 353 --LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDI------PDRLNIMIDVALALEYL 404
L + L +E+ G L K+L N F++ P R ++ D++ AL YL
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYL---NQFENCCGLKEGPIR-TLLSDISSALRYL 138
Query: 405 HHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
H ++H DLKP NI+L + ++ + D G +K L +G+ + T + T+ Y+A
Sbjct: 139 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLA 192
Query: 462 PEFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
PE + + D +S+G L E T +P
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 299 LGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIKI---- 352
LG+GGFG V + I D G VAIK +L R + E ++++ + H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 353 --LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDI------PDRLNIMIDVALALEYL 404
L + L +E+ G L K+L N F++ P R ++ D++ AL YL
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYL---NQFENCCGLKEGPIR-TLLSDISSALRYL 137
Query: 405 HHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
H ++H DLKP NI+L + ++ + D G +K L +G+ + T + T+ Y+A
Sbjct: 138 HENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLA 191
Query: 462 PEFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
PE + + D +S+G L E T +P
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVY----KGILSDG----TTVAIKIFNLQ-LEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V G+ D T VA+K+ E+ SE E+++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLY-------------SHNYFQDI--PDRLNI 393
+I +L +C +++E+ G+L ++L SHN + + D ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
VA +EYL S +H DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+LL E FT + S
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------LGGSPYP 254
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 255 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 127/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++ + G+L ++L + Y DI D ++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 261
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 125/290 (43%), Gaps = 31/290 (10%)
Query: 297 NLLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIK 351
++G G FG V G L VAIK ++ R F SE ++ H N+I
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ ++ E+M NGSLD +L ++ + + ++ + ++YL
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 136
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNV 470
VH DL NIL++ N+V VSDFG+S++L + ++ T I + APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
+S DV+SYGI++ E + E +M+ ++ +K + E
Sbjct: 197 TSASDVWSYGIVMWEVMS----YGERPYWDMSNQDVIKA--------------IEEGYRL 238
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLR 580
MDC +++ L LDC + R L DK + + N+L+
Sbjct: 239 PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML----DKLIRNPNSLK 284
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + ++L +A + E V+ +V +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 111 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 170 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 263
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 125/290 (43%), Gaps = 31/290 (10%)
Query: 297 NLLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIK 351
++G G FG V G L VAIK ++ R F SE ++ H N+I
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ ++ E+M NGSLD +L ++ + + ++ + ++YL
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMS 130
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT-IGYMAPEFGSEGNV 470
VH DL NIL++ N+V VSDFG+S++L + ++ T I + APE +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
+S DV+SYGI++ E + E +M+ ++ +K + E
Sbjct: 191 TSASDVWSYGIVMWEVMS----YGERPYWDMSNQDVIKA--------------IEEGYRL 232
Query: 531 SARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDANTLR 580
MDC +++ L LDC + R L DK + + N+L+
Sbjct: 233 PPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNML----DKLIRNPNSLK 278
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 127/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVYK----GILSD----GTTVAIKIF-NLQLEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V GI D TVA+K+ + E+ SE E+++ + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-----NYFQDI----------PDRLNI 393
+I +L +C +++ + G+L ++L + Y DI D ++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+A +EYL S +H DL N+L+ EN V ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+L+ E FT + S
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT------------------LGGSPYP 261
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 262 GIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 52/298 (17%)
Query: 299 LGSGGFGSVYKGILSDG-----------TTVAIKIFNLQ-LEQAFRSFNSECEVLRNV-R 345
LG G FG V +L++ T VA+K+ E+ SE E+++ + +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWL---------YSHNYFQDIPDRLN---- 392
H+N+I +L +C +++E+ G+L ++L YS+N + ++L+
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 393 --IMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQ 450
VA +EYL S +H DL N+L+ E+ V ++DFG+++ + D
Sbjct: 142 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 451 TMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510
T + +MAPE + + + DV+S+G+LL E FT + S
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------LGGS 240
Query: 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 241 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 108/239 (45%), Gaps = 41/239 (17%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRN--VRHRN 348
D L+G G +G+VYKG L D VA+K+F+ Q +F +E + R + H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQ---NFINEKNIYRVPLMEHDN 68
Query: 349 LIKILSSCCNTNFKA-----LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEY 403
+ + + LV+E+ PNGSL K+L H D + V L Y
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAY 126
Query: 404 LHH-----GHSTPVV-HCDLKPSNILLDENMVAHVSDFGISKLL--------GEGDDSVI 449
LH H P + H DL N+L+ + +SDFG+S L GE D++ I
Sbjct: 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAI 186
Query: 450 QTMTIATIGYMAPEFGSEGNVS--------SKCDVYSYGILLLETFTRKKPTDEMFTGE 500
+ TI YMAPE EG V+ + D+Y+ G++ E F R ++F GE
Sbjct: 187 S--EVGTIRYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFMR---CTDLFPGE 239
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 52/298 (17%)
Query: 299 LGSGGFGSVYKGILSDG-----------TTVAIKIFNLQ-LEQAFRSFNSECEVLRNV-R 345
LG G FG V +L++ T VA+K+ E+ SE E+++ + +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWL---------YSHNYFQDIPDRLN---- 392
H+N+I +L +C +++E+ G+L ++L YS+N + ++L+
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 393 --IMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQ 450
VA +EYL S +H DL N+L+ E+ V ++DFG+++ + D
Sbjct: 194 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 451 TMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510
T + +MAPE + + + DV+S+G+LL E FT + S
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------LGGS 292
Query: 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 293 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 52/298 (17%)
Query: 299 LGSGGFGSVYKGILSDG-----------TTVAIKIFNLQ-LEQAFRSFNSECEVLRNV-R 345
LG G FG V +L++ T VA+K+ E+ SE E+++ + +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWL---------YSHNYFQDIPDRLN---- 392
H+N+I +L +C +++E+ G+L ++L YS+N + ++L+
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 393 --IMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQ 450
VA +EYL S +H DL N+L+ E+ V ++DFG+++ + D
Sbjct: 145 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 451 TMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510
T + +MAPE + + + DV+S+G+LL E FT + S
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------LGGS 243
Query: 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 244 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+++ MP G L ++ H LN + +A + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 137 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 52/298 (17%)
Query: 299 LGSGGFGSVYKGILSDG-----------TTVAIKIFNLQ-LEQAFRSFNSECEVLRNV-R 345
LG G FG V +L++ T VA+K+ E+ SE E+++ + +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWL---------YSHNYFQDIPDRLN---- 392
H+N+I +L +C +++E+ G+L ++L YS+N + ++L+
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 393 --IMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQ 450
VA +EYL S +H DL N+L+ E+ V ++DFG+++ + D
Sbjct: 146 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 451 TMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510
T + +MAPE + + + DV+S+G+LL E FT + S
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------LGGS 244
Query: 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 245 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 52/298 (17%)
Query: 299 LGSGGFGSVYKGILSDG-----------TTVAIKIFNLQ-LEQAFRSFNSECEVLRNV-R 345
LG G FG V +L++ T VA+K+ E+ SE E+++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWL---------YSHNYFQDIPDRLN---- 392
H+N+I +L +C +++E+ G+L ++L YS+N + ++L+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 393 --IMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQ 450
VA +EYL S +H DL N+L+ E+ V ++DFG+++ + D
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 451 TMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510
T + +MAPE + + + DV+S+G+LL E FT + S
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------LGGS 251
Query: 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 252 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 52/298 (17%)
Query: 299 LGSGGFGSVYKGILSDG-----------TTVAIKIFNLQ-LEQAFRSFNSECEVLRNV-R 345
LG G FG V +L++ T VA+K+ E+ SE E+++ + +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWL---------YSHNYFQDIPDRLN---- 392
H+N+I +L +C +++E+ G+L ++L YS+N + ++L+
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 393 --IMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQ 450
VA +EYL S +H DL N+L+ E+ V ++DFG+++ + D
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 451 TMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510
T + +MAPE + + + DV+S+G+LL E FT + S
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------LGGS 251
Query: 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 252 PYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 21/221 (9%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIK---IFNLQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
+G G F VY+ L DG VA+K IF+L +A E ++L+ + H N+IK +
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQD----IPDRL--NIMIDVALALEYLHHGH 408
S N +VLE G L + + +F+ IP+R + + ALE H H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMI---KHFKKQKRLIPERTVWKYFVQLCSALE---HMH 153
Query: 409 STPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG 468
S V+H D+KP+N+ + V + D G+ + + + T YM+PE E
Sbjct: 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIHEN 211
Query: 469 NVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE 509
+ K D++S G LL E + P + +MNL + K+
Sbjct: 212 GYNFKSDIWSLGCLLYEMAALQSP---FYGDKMNLYSLCKK 249
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+++ MP G L ++ H LN + +A + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 137 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 230
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 3/212 (1%)
Query: 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRL 60
+ ++ QL + + ++ G+IP L Q+K L +L N L+G++P ++SL +L +
Sbjct: 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156
Query: 61 NSNKLTSSIPSALWALEYILY-VNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPK 119
+ N+++ +IP + + + + +S N LTG + N+ + +DLSRN L GD
Sbjct: 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAF-VDLSRNMLEGDASV 215
Query: 120 TIAGLKDLTNLSLAGNQFQGPIPESFGXXXXXXXXXXXXXXXXXGIPKSLVALSHLKQFN 179
K+ + LA N + + G +P+ L L L N
Sbjct: 216 LFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLN 274
Query: 180 VSHNRLEGEIPTEGPFRNFSAQSFHWNYALCG 211
VS N L GEIP G + F ++ N LCG
Sbjct: 275 VSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 27 QLKRLNSLSLQGNKLNGS--IPTCLASLTSLRELRLNS-NKLTSSIPSALWALEYILYVN 83
Q R+N+L L G L IP+ LA+L L L + N L IP A+ L + Y+
Sbjct: 48 QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLY 107
Query: 84 LSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPE 143
++ ++G++ + +K L+ LD S N LSG +P +I+ L +L ++ GN+ G IP+
Sbjct: 108 ITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Query: 144 SFGXXXXXXXXXXXXXXXXXG-IPKSLVALSHLKQFNVSHNRLEGE 188
S+G G IP + L +L ++S N LEG+
Sbjct: 168 SYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGD 212
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVY----KGILSDG----TTVAIKIFNLQ-LEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V G+ D T VA+K+ E+ SE E+++ + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLY-------------SHNYFQDI--PDRLNI 393
+I +L +C +++E+ G+L ++L SHN + + D ++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
VA +EYL S +H DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 141 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+LL E FT + S
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------LGGSPYP 239
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 240 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 126/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H +L
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRNL 131
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ E ++ + I + APE + G + K DV+
Sbjct: 132 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 191 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 231
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 232 PEELYQLMRLCWKERPEDR 250
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+++ MP G L ++ H LN + +A + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 140 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 125/259 (48%), Gaps = 27/259 (10%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G G V+ G + T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL-EYLHHGHSTPVVHCDL 417
++ E+M NGSL +L + + I +N ++D+A + E + +H DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ + + ++DFG+++L+ + + + + I + APE + G + K DV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 194
Query: 478 SYGILLLETFTRKK-PTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDC 536
S+GILL E T + P M E V ++L G ++R +N C
Sbjct: 195 SFGILLTEIVTHGRIPYPGMTNPE------VIQNLERGY------RMVRPDN-------C 235
Query: 537 LLSIFHLALDCCAELPDQR 555
++ L C E P+ R
Sbjct: 236 PEELYQLMRLCWKERPEDR 254
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+++ MP G L ++ H LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+++ MP G L ++ H LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 46/295 (15%)
Query: 299 LGSGGFGSVY----KGILSDG----TTVAIKIFNLQ-LEQAFRSFNSECEVLRNV-RHRN 348
LG G FG V G+ D T VA+K+ E+ SE E+++ + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLY-------------SHNYFQDI--PDRLNI 393
+I +L +C +++E+ G+L ++L SHN + + D ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
VA +EYL S +H DL N+L+ E+ V ++DFG+++ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ +MAPE + + + DV+S+G+LL E FT + S
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT------------------LGGSPYP 254
Query: 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568
G+P LL+E + +C ++ + DC +P QR K L +I
Sbjct: 255 GVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 53/301 (17%)
Query: 299 LGSGGFGSVYKGIL------SDGTTVAIKIFNLQLEQA-FRSFNSECEVLRNVRHRNLIK 351
LG G FG V K + TTVA+K+ + R SE VL+ V H ++IK
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQ---------------DIPDR------ 390
+ +C L++E+ GSL +L D PD
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 391 --LNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
++ ++ ++YL +VH DL NIL+ E +SDFG+S+ + E D V
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
++ + +MA E + +++ DV+S+G+LL E T G
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--------LGGN-------- 251
Query: 509 ESLPH-GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKK 567
P+ G+P NLL+ + +C ++ L L C + PD+R D + L+K
Sbjct: 252 ---PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
Query: 568 I 568
+
Sbjct: 309 M 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 53/301 (17%)
Query: 299 LGSGGFGSVYKGIL------SDGTTVAIKIFNLQLEQA-FRSFNSECEVLRNVRHRNLIK 351
LG G FG V K + TTVA+K+ + R SE VL+ V H ++IK
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQ---------------DIPDR------ 390
+ +C L++E+ GSL +L D PD
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 391 --LNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
++ ++ ++YL +VH DL NIL+ E +SDFG+S+ + E D V
Sbjct: 151 DLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
++ + +MA E + +++ DV+S+G+LL E T G
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--------LGGN-------- 251
Query: 509 ESLPH-GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKK 567
P+ G+P NLL+ + +C ++ L L C + PD+R D + L+K
Sbjct: 252 ---PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
Query: 568 I 568
+
Sbjct: 309 M 309
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+++ MP G L ++ H LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 131/316 (41%), Gaps = 58/316 (18%)
Query: 261 NRSTKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKG-ILSDGTTVA 319
NR K+ D ++ + W + D+ +G G FG V K I DG +
Sbjct: 4 NRKVKNNPDPTIYPVLDWNDIKFQDV------------IGEGNFGQVLKARIKKDGLRMD 51
Query: 320 IKIFNLQ---LEQAFRSFNSECEVLRNVRHR-NLIKILSSCCNTNFKALVLEFMPNGSLD 375
I ++ + R F E EVL + H N+I +L +C + + L +E+ P+G+L
Sbjct: 52 AAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLL 111
Query: 376 KWLYSHNYFQDIP---------------DRLNIMIDVALALEYLHHGHSTPVVHCDLKPS 420
+L + P L+ DVA ++YL +H +L
Sbjct: 112 DFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRNLAAR 168
Query: 421 NILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYG 480
NIL+ EN VA ++DFG+S+ G+ + V +TM + +MA E + ++ DV+SYG
Sbjct: 169 NILVGENYVAKIADFGLSR--GQ-EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYG 225
Query: 481 ILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLS 539
+LL E + P M E+ E LP G ++C
Sbjct: 226 VLLWEIVSLGGTPYCGMTCAEL------YEKLPQGYR-------------LEKPLNCDDE 266
Query: 540 IFHLALDCCAELPDQR 555
++ L C E P +R
Sbjct: 267 VYDLMRQCWREKPYER 282
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 9/204 (4%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
+LG G +G VY G LS+ +AIK + + + + E + ++++H+N+++ L S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
F + +E +P GSL L S +D + I LE L + H +VH
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTKQILEGLKYLHDNQIVHR 146
Query: 416 DLKPSNILLDE-NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG--NVSS 472
D+K N+L++ + V +SDFG SK L G + +T T T+ YMAPE +G
Sbjct: 147 DIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFT-GTLQYMAPEIIDKGPRGYGK 204
Query: 473 KCDVYSYGILLLETFTRKKPTDEM 496
D++S G ++E T K P E+
Sbjct: 205 AADIWSLGCTIIEMATGKPPFYEL 228
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 102/204 (50%), Gaps = 9/204 (4%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
+LG G +G VY G LS+ +AIK + + + + E + ++++H+N+++ L S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
F + +E +P GSL L S +D + I LE L + H +VH
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTKQILEGLKYLHDNQIVHR 132
Query: 416 DLKPSNILLDE-NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG--NVSS 472
D+K N+L++ + V +SDFG SK L G + +T T T+ YMAPE +G
Sbjct: 133 DIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFT-GTLQYMAPEIIDKGPRGYGK 190
Query: 473 KCDVYSYGILLLETFTRKKPTDEM 496
D++S G ++E T K P E+
Sbjct: 191 AADIWSLGCTIIEMATGKPPFYEL 214
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 53/301 (17%)
Query: 299 LGSGGFGSVYKGIL------SDGTTVAIKIFNLQLEQA-FRSFNSECEVLRNVRHRNLIK 351
LG G FG V K + TTVA+K+ + R SE VL+ V H ++IK
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQ---------------DIPDR------ 390
+ +C L++E+ GSL +L D PD
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 391 --LNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
++ ++ ++YL +VH DL NIL+ E +SDFG+S+ + E D V
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
++ + +MA E + +++ DV+S+G+LL E T G
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT--------LGGN-------- 251
Query: 509 ESLPH-GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKK 567
P+ G+P NLL+ + +C ++ L L C + PD+R D + L+K
Sbjct: 252 ---PYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308
Query: 568 I 568
+
Sbjct: 309 M 309
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 123/261 (47%), Gaps = 41/261 (15%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358
LG+G FG V+ + T VA+K + +F +E V++ ++H L+K L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVK-LHAVVT 247
Query: 359 TNFKALVLEFMPNGSLDKWLYS-HNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
++ EFM GSL +L S Q +P ++ +A + ++ + +H DL
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDL 304
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
+ +NIL+ ++V ++DFG++++ + I + APE + G+ + K DV+
Sbjct: 305 RAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFGSFTIKSDVW 353
Query: 478 SYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR--EENFFSARMD 535
S+GILL+E T + +P+ P +++ ++R E + R +
Sbjct: 354 SFGILLMEIVTYGR-------------------IPY--PGMSNPEVIRALERGYRMPRPE 392
Query: 536 -CLLSIFHLALDCCAELPDQR 555
C ++++ + C P++R
Sbjct: 393 NCPEELYNIMMRCWKNRPEER 413
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 146 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 239
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 121/280 (43%), Gaps = 46/280 (16%)
Query: 297 NLLGSGGFGSVYKG-ILSDGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHR-NLIK 351
+++G G FG V K I DG + I ++ + R F E EVL + H N+I
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP---------------DRLNIMID 396
+L +C + + L +E+ P+G+L +L + P L+ D
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
VA ++YL +H DL NIL+ EN VA ++DFG+S+ G+ + V +TM
Sbjct: 151 VARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR--GQ-EVYVKKTMGRLP 204
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGL 515
+ +MA E + ++ DV+SYG+LL E + P M E+ E LP G
Sbjct: 205 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL------YEKLPQGY 258
Query: 516 PKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQR 555
++C ++ L C E P +R
Sbjct: 259 R-------------LEKPLNCDDEVYDLMRQCWREKPYER 285
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 161 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 254
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 232
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 142 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 235
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 121/280 (43%), Gaps = 46/280 (16%)
Query: 297 NLLGSGGFGSVYKG-ILSDGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHR-NLIK 351
+++G G FG V K I DG + I ++ + R F E EVL + H N+I
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP---------------DRLNIMID 396
+L +C + + L +E+ P+G+L +L + P L+ D
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
VA ++YL +H DL NIL+ EN VA ++DFG+S+ G+ + V +TM
Sbjct: 141 VARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR--GQ-EVYVKKTMGRLP 194
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGL 515
+ +MA E + ++ DV+SYG+LL E + P M E+ E LP G
Sbjct: 195 VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL------YEKLPQGY 248
Query: 516 PKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQR 555
++C ++ L C E P +R
Sbjct: 249 R-------------LEKPLNCDDEVYDLMRQCWREKPYER 275
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 130 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+++ MP G L ++ H LN + +A + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 140 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 233
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+++ MP G L ++ H LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 133 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 226
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+++ MP G L ++ H LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 293 FNECNLLGSGGFGSVY---KGILSD-GTTVAIKIFN---LQLEQAFRSFNSECEVLRNVR 345
F +LG G FG V+ K D G A+K+ L++ R+ E ++L +V
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVN 88
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H ++K+ + L+L+F+ G L L F + D + ++AL L++LH
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE-EDVKFYLAELALGLDHLH 147
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEF 464
S +++ DLKP NILLDE ++DFG+SK E D + + T+ YMAPE
Sbjct: 148 ---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEV 201
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ S D +SYG+L+ E T P
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 12/205 (5%)
Query: 299 LGSGGFGSVYKGIL---SDGTTVAIKIFNLQLEQA-FRSFNSECEVLRNVRHRNLIKILS 354
LG G FGSV +G+ VAIK+ E+A E +++ + + +++++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
C LV+E G L K+L + + ++ V++ ++YL + VH
Sbjct: 78 -VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVH 133
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEFGSEGNVSS 472
DL N+LL A +SDFG+SK LG DDS + + + APE + SS
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 473 KCDVYSYGILLLETFTR-KKPTDEM 496
+ DV+SYG+ + E + +KP +M
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 19/225 (8%)
Query: 299 LGSGGFGSVYKG--ILSDGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+G+GGF V IL+ G VAIKI + L +E E L+N+RH+++ ++
Sbjct: 18 IGTGGFAKVKLACHILT-GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 356 CCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N +VLE+ P G L ++ S + + R+ + + A+ Y+ HS H
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYV---HSQGYAHR 132
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF-GSEGNVSSKC 474
DLKP N+L DE + DFG+ D +QT ++ Y APE + + S+
Sbjct: 133 DLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEA 191
Query: 475 DVYSYGILLLETFTRKKPTDE---------MFTGEMNLKNWVKES 510
DV+S GILL P D+ + G+ ++ W+ S
Sbjct: 192 DVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPS 236
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +L SG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+++ MP G L ++ H LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA---FRSFNSECEVLRNVR 345
+D + +LG GG V+ L D VA+K+ L + + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 346 HRNLIKIL----SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-LNIMIDVALA 400
H ++ + + +V+E++ +L +++ P R + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPKRAIEVIADACQA 128
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT-IATIGY 459
L + H ++H D+KP+NIL+ V DFGI++ + + +SV QT I T Y
Sbjct: 129 LNF---SHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQY 185
Query: 460 MAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE 500
++PE +V ++ DVYS G +L E T + P FTG+
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQ--AFRSFNSECEVLRNVRH 346
D F+ LG G FG+VY + A+K+ F QLE+ E E+ ++RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ + + L+LEF P G L K L H F D M ++A AL H+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADAL---HY 129
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
H V+H D+KP N+L+ ++DFG S S+ + T+ Y+ PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMIE 185
Query: 467 EGNVSSKCDVYSYGILLLETFTRKKPTD 494
K D++ G+L E P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 231
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +LGSG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA---FRSFNSECEVLRNVR 345
+D + +LG GG V+ L D VA+K+ L + + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 346 HRNLIKIL----SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-LNIMIDVALA 400
H ++ + + +V+E++ +L +++ P R + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPKRAIEVIADACQA 128
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT-IATIGY 459
L + H ++H D+KP+NI++ V DFGI++ + + +SV QT I T Y
Sbjct: 129 LNF---SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 460 MAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE 500
++PE +V ++ DVYS G +L E T + P FTG+
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA---FRSFNSECEVLRNVR 345
+D + +LG GG V+ L D VA+K+ L + + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 346 HRNLIKIL----SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-LNIMIDVALA 400
H ++ + + +V+E++ +L +++ P R + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPKRAIEVIADACQA 128
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT-IATIGY 459
L + H ++H D+KP+NI++ V DFGI++ + + +SV QT I T Y
Sbjct: 129 LNF---SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 460 MAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE 500
++PE +V ++ DVYS G +L E T + P FTG+
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 22/285 (7%)
Query: 299 LGSGGFGSVY---KGILSDGT--TVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIKI 352
LG G FG V +DGT VA+K RS + E ++LR + H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 353 LSSCCNTNFKA---LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHS 409
CC A LV+E++P GSL +L H+ + L + + YLH H
Sbjct: 99 -KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSI--GLAQLLLFAQQICEGMAYLHAQH- 154
Query: 410 TPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEG 468
+H DL N+LLD + + + DFG++K + EG + ++ + + + APE E
Sbjct: 155 --YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 469 NVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREEN 528
DV+S+G+ L E T + T + L + G + L E
Sbjct: 213 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG-----IAQGQMTVLRLTELLERG 267
Query: 529 FFSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572
R D C ++HL +C R ++ LK + +K+
Sbjct: 268 ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQ--AFRSFNSECEVLRNVRH 346
D F+ LG G FG+VY + A+K+ F QLE+ E E+ ++RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ + + L+LEF P G L K L H F D M ++A AL H+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADAL---HY 129
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
H V+H D+KP N+L+ ++DFG S S+ + T+ Y+ PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMIE 185
Query: 467 EGNVSSKCDVYSYGILLLETFTRKKPTD 494
K D++ G+L E P D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 115/231 (49%), Gaps = 22/231 (9%)
Query: 287 ERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRH 346
E+ + C ++G+G FG V++ L + VAIK ++ Q R N E +++R V+H
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIK----KVLQDKRFKNRELQIMRIVKH 91
Query: 347 RNLIKILSSCCNTN------FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA 400
N++ + + + F LVLE++P + Q +P L I + +
Sbjct: 92 PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMP-MLLIKLYMYQL 150
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L L + HS + H D+KP N+LLD + V + DFG +K+L G+ +V I + Y
Sbjct: 151 LRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV---SXICSRYY 207
Query: 460 MAPE--FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
APE FG+ N ++ D++S G ++ E + +P +F GE + V+
Sbjct: 208 RAPELIFGAT-NYTTNIDIWSTGCVMAE-LMQGQP---LFPGESGIDQLVE 253
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQ--AFRSFNSECEVLRNVRH 346
D F+ LG G FG+VY + A+K+ F QLE+ E E+ ++RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ + + L+LEF P G L K L H F D M ++A AL H+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF-DEQRSATFMEELADAL---HY 130
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
H V+H D+KP N+L+ ++DFG S S+ + T+ Y+ PE
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMIE 186
Query: 467 EGNVSSKCDVYSYGILLLETFTRKKPTD 494
K D++ G+L E P D
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 274 SLATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSD----GTTVAIK-IFNLQLE 328
S ++W++ + E F LG+G F V +L++ G A+K I L+
Sbjct: 9 SSSSWKKQA----EDIKKIFEFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALK 61
Query: 329 QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP 388
S +E VLR ++H N++ + + N LV++ + G L + ++ +
Sbjct: 62 GKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE-K 120
Query: 389 DRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGD 445
D ++ V A+ YLH +VH DLKP N+L DE +SDFG+SK+ G+GD
Sbjct: 121 DASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD 177
Query: 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGIL 482
+ + T GY+APE ++ S D +S G++
Sbjct: 178 ---VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +L SG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 236
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKI- 352
LG G FGSV Y + + G VA+K R F E ++L+ + ++K
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 353 -LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+S LV+E++P+G L +L H D L + +EYL S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 131
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPEFGSEGNV 470
VH DL NIL++ ++DFG++KLL + D V++ + I + APE S+
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 471 SSKCDVYSYGILLLETFT 488
S + DV+S+G++L E FT
Sbjct: 192 SRQSDVWSFGVVLYELFT 209
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAF-----RSFNSECEVLRNVRH 346
F + +L SG FG+VYKG+ + +G V I + +L +A + E V+ +V +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
++ ++L C + + L+ + MP G L ++ H LN + +A + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502
+ + DV+SYG+ + E T KP D + E++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K R F E ++L+ + ++K
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 354 SSCCNTNFKAL--VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
++L V+E++P+G L +L H D L + +EYL S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 134
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPEFGSEGNV 470
VH DL NIL++ ++DFG++KLL + D V++ + I + APE S+
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 471 SSKCDVYSYGILLLETFT 488
S + DV+S+G++L E FT
Sbjct: 195 SRQSDVWSFGVVLYELFT 212
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 96/218 (44%), Gaps = 42/218 (19%)
Query: 293 FNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
F E L+GSGGFG V+K DG T IK E+A R E + L + H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 352 IL----------------SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMI 395
SS T + +EF G+L++W I R +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW---------IEKRRGEKL 119
Query: 396 DVALALEYLH-------HGHSTPVVHCDLKPSNILLDENMVAHVSDFG-ISKLLGEGDDS 447
D LALE + HS +++ DLKPSNI L + + DFG ++ L +G
Sbjct: 120 DKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK-- 177
Query: 448 VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+ + T+ YM+PE S + + D+Y+ G++L E
Sbjct: 178 --RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 37/228 (16%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRH 346
R F E +LG G FG V K + D AIK E+ + SE +L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 347 -------------RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNI 393
RN +K +++ + + +E+ NG+L ++S N Q + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK-------------- 439
+ AL Y+H S ++H DLKP NI +DE+ + DFG++K
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 440 -LLGEGDDSVIQTMTIATIGYMAPE-FGSEGNVSSKCDVYSYGILLLE 485
L G D+ T I T Y+A E G+ + K D+YS GI+ E
Sbjct: 179 NLPGSSDN---LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 299 LGSGGFGSVYKGIL---SDGTTVAIKIFNLQLEQA-FRSFNSECEVLRNVRHRNLIKILS 354
LG G FGSV +G+ VAIK+ E+A E +++ + + +++++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
C LV+E G L K+L + + ++ V++ ++YL + VH
Sbjct: 404 -VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVH 459
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEFGSEGNVSS 472
+L N+LL A +SDFG+SK LG DDS + + + APE + SS
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 473 KCDVYSYGILLLETFTR-KKPTDEMFTGEM 501
+ DV+SYG+ + E + +KP +M E+
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKMKGPEV 548
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K R F E ++L+ + ++K
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 354 SSCCNTNFKAL--VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
++L V+E++P+G L +L H D L + +EYL S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 147
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPEFGSEGNV 470
VH DL NIL++ ++DFG++KLL + D V++ + I + APE S+
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 471 SSKCDVYSYGILLLETFT 488
S + DV+S+G++L E FT
Sbjct: 208 SRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 299 LGSGGFGSV----YKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
LG G FGSV Y + + G VA+K R F E ++L+ + ++K
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 354 SSCCNTNFKAL--VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
++L V+E++P+G L +L H D L + +EYL S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 135
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPEFGSEGNV 470
VH DL NIL++ ++DFG++KLL + D V++ + I + APE S+
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 471 SSKCDVYSYGILLLETFT 488
S + DV+S+G++L E FT
Sbjct: 196 SRQSDVWSFGVVLYELFT 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 20/284 (7%)
Query: 299 LGSGGFGSVY---KGILSDGT--TVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIKI 352
LG G FG V +DGT VA+K RS + E ++LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 353 LSSCCNTNFKAL--VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
C + K+L V+E++P GSL +L H+ + L + + YLH H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSI--GLAQLLLFAQQICEGMAYLHSQH-- 137
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGN 469
+H +L N+LLD + + + DFG++K + EG + ++ + + + APE E
Sbjct: 138 -YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 470 VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENF 529
DV+S+G+ L E T + T + L + G + L E
Sbjct: 197 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG-----IAQGQMTVLRLTELLERGE 251
Query: 530 FSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572
R D C ++HL +C R ++ LK + +K+
Sbjct: 252 RLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 295
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 122/284 (42%), Gaps = 20/284 (7%)
Query: 299 LGSGGFGSVY---KGILSDGT--TVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIKI 352
LG G FG V +DGT VA+K RS + E ++LR + H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 353 LSSCCNTNFKAL--VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
C + K+L V+E++P GSL +L H+ + L + + YLH H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSI--GLAQLLLFAQQICEGMAYLHAQH-- 137
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGN 469
+H +L N+LLD + + + DFG++K + EG + ++ + + + APE E
Sbjct: 138 -YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYK 196
Query: 470 VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENF 529
DV+S+G+ L E T + T + L + G + L E
Sbjct: 197 FYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG-----IAQGQMTVLRLTELLERGE 251
Query: 530 FSARMD-CLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572
R D C ++HL +C R ++ LK + +K+
Sbjct: 252 RLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 295
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 101/243 (41%), Gaps = 55/243 (22%)
Query: 281 TSYLDLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECE 339
T Y +R F E L+GSGGFG V+K DG T I+ E+A R E +
Sbjct: 2 TKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVK 57
Query: 340 VLRNVRHRNLIKIL-----------------------------SSCCNTNFKALVLEFMP 370
L + H N++ SS T + +EF
Sbjct: 58 ALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCD 117
Query: 371 NGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH-------HGHSTPVVHCDLKPSNIL 423
G+L++W I R +D LALE + HS ++H DLKPSNI
Sbjct: 118 KGTLEQW---------IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 424 LDENMVAHVSDFG-ISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGIL 482
L + + DFG ++ L +G +T + T+ YM+PE S + + D+Y+ G++
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGK----RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 483 LLE 485
L E
Sbjct: 225 LAE 227
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 113/272 (41%), Gaps = 33/272 (12%)
Query: 297 NLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+LG G FG K + G + +K E+ R+F E +V+R + H N++K +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 356 CCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
+ E++ G+L + S + R++ D+A + YL HS ++H
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYL---HSMNIIHR 132
Query: 416 DLKPSNILLDENMVAHVSDFGISKLL------GEG------DDSVIQTMTIATIGYMAPE 463
DL N L+ EN V+DFG+++L+ EG D + + +MAPE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523
+ + K DV+S+GI+L E R + M+ V+ L P
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPP------ 246
Query: 524 LREENFFSARMDCLLSIFHLALDCCAELPDQR 555
+C S F + + CC P++R
Sbjct: 247 -----------NCPPSFFPITVRCCDLDPEKR 267
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 297 NLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV------RHRNL 349
+ LG G FG V G G VA+KI N Q RS + ++ R + RH ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 350 IKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHS 409
IK+ +V+E++ G L ++ H +++ R + + A++Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---R 129
Query: 410 TPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGN 469
VVH DLKP N+LLD +M A ++DFG+S ++ +G+ + + Y APE S G
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVIS-GR 185
Query: 470 VSS--KCDVYSYGILLLETFTRKKPTDE 495
+ + + D++S G++L P D+
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 293 FNECNLLGSGGFGSVY---KGILSDGTTV-AIKIFN---LQLEQAFRSFNSECEVLRNVR 345
F +LG G FG V+ K SD + A+K+ L++ R+ E ++L V
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H ++K+ + L+L+F+ G L L F + D + ++ALAL++LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE-EDVKFYLAELALALDHLH 143
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEF 464
S +++ DLKP NILLDE ++DFG+SK E D + + T+ YMAPE
Sbjct: 144 ---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEV 197
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D +S+G+L+ E T P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 293 FNECNLLGSGGFGSVY---KGILSDGTTV-AIKIFN---LQLEQAFRSFNSECEVLRNVR 345
F +LG G FG V+ K SD + A+K+ L++ R+ E ++L V
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 85
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H ++K+ + L+L+F+ G L L F + D + ++ALAL++LH
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE-EDVKFYLAELALALDHLH 144
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEF 464
S +++ DLKP NILLDE ++DFG+SK E D + + T+ YMAPE
Sbjct: 145 ---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEV 198
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D +S+G+L+ E T P
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G + K L + F D + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSYC 129
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 182
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 293 FNECNLLGSGGFGSVY---KGILSDGTTV-AIKIFN---LQLEQAFRSFNSECEVLRNVR 345
F +LG G FG V+ K SD + A+K+ L++ R+ E ++L V
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H ++K+ + L+L+F+ G L L F + D + ++ALAL++LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE-EDVKFYLAELALALDHLH 143
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEF 464
S +++ DLKP NILLDE ++DFG+SK E D + + T+ YMAPE
Sbjct: 144 ---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEV 197
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D +S+G+L+ E T P
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 297 NLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV------RHRNL 349
+ LG G FG V G G VA+KI N Q RS + ++ R + RH ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 350 IKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHS 409
IK+ +V+E++ G L ++ H +++ R + + A++Y H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH---R 129
Query: 410 TPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGN 469
VVH DLKP N+LLD +M A ++DFG+S ++ +G+ + + Y APE S G
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVIS-GR 185
Query: 470 VSS--KCDVYSYGILLLETFTRKKPTDE 495
+ + + D++S G++L P D+
Sbjct: 186 LYAGPEVDIWSCGVILYALLCGTLPFDD 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 299 LGSGGFGSVYKGILS--DGTTVAIKIFNLQLE-----QAFRSFNSECEVLRNVRHRNLIK 351
LG G FG V +G G TV++ + L+ + +A F E + ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ K +V E P GSL L H + + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 141
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-VIQTMTIATIGYMAPEFGSEGNV 470
+H DL N+LL + + DFG+ + L + DD V+Q + APE
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 201
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S D + +G+ L E FT + G L KE L R E
Sbjct: 202 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----------ERLPRPE--- 248
Query: 531 SARMDCLLSIFHLALDCCAELPDQR 555
DC I+++ + C A P+ R
Sbjct: 249 ----DCPQDIYNVMVQCWAHKPEDR 269
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 299 LGSGGFGSVYKGILS--DGTTVAIKIFNLQLE-----QAFRSFNSECEVLRNVRHRNLIK 351
LG G FG V +G G TV++ + L+ + +A F E + ++ HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ K +V E P GSL L H + + VA + YL S
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 141
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD-SVIQTMTIATIGYMAPEFGSEGNV 470
+H DL N+LL + + DFG+ + L + DD V+Q + APE
Sbjct: 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF 201
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S D + +G+ L E FT + G L KE L R E
Sbjct: 202 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----------ERLPRPE--- 248
Query: 531 SARMDCLLSIFHLALDCCAELPDQR 555
DC I+++ + C A P+ R
Sbjct: 249 ----DCPQDIYNVMVQCWAHKPEDR 269
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 299 LGSGGFGSVYKGILS--DGTTVAIKIFNLQLE-----QAFRSFNSECEVLRNVRHRNLIK 351
LG G FG V +G G TV++ + L+ + +A F E + ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ K +V E P GSL L H + + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 131
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD-SVIQTMTIATIGYMAPEFGSEGNV 470
+H DL N+LL + + DFG+ + L + DD V+Q + APE
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTF 191
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S D + +G+ L E FT + G L KE L R E
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----------ERLPRPE--- 238
Query: 531 SARMDCLLSIFHLALDCCAELPDQR 555
DC I+++ + C A P+ R
Sbjct: 239 ----DCPQDIYNVMVQCWAHKPEDR 259
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 299 LGSGGFGSVYKGILS--DGTTVAIKIFNLQLE-----QAFRSFNSECEVLRNVRHRNLIK 351
LG G FG V +G G TV++ + L+ + +A F E + ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ K +V E P GSL L H + + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 135
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-VIQTMTIATIGYMAPEFGSEGNV 470
+H DL N+LL + + DFG+ + L + DD V+Q + APE
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S D + +G+ L E FT + G L KE L R E
Sbjct: 196 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----------ERLPRPE--- 242
Query: 531 SARMDCLLSIFHLALDCCAELPDQR 555
DC I+++ + C A P+ R
Sbjct: 243 ----DCPQDIYNVMVQCWAHKPEDR 263
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 299 LGSGGFGSVYKGILS--DGTTVAIKIFNLQLE-----QAFRSFNSECEVLRNVRHRNLIK 351
LG G FG V +G G TV++ + L+ + +A F E + ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ K +V E P GSL L H + + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 131
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-VIQTMTIATIGYMAPEFGSEGNV 470
+H DL N+LL + + DFG+ + L + DD V+Q + APE
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S D + +G+ L E FT + G L KE L R E
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----------ERLPRPE--- 238
Query: 531 SARMDCLLSIFHLALDCCAELPDQR 555
DC I+++ + C A P+ R
Sbjct: 239 ----DCPQDIYNVMVQCWAHKPEDR 259
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 299 LGSGGFGSVYKGILS--DGTTVAIKIFNLQLE-----QAFRSFNSECEVLRNVRHRNLIK 351
LG G FG V +G G TV++ + L+ + +A F E + ++ HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ K +V E P GSL L H + + VA + YL S
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 131
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-VIQTMTIATIGYMAPEFGSEGNV 470
+H DL N+LL + + DFG+ + L + DD V+Q + APE
Sbjct: 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 191
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S D + +G+ L E FT + G L KE L R E
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----------ERLPRPE--- 238
Query: 531 SARMDCLLSIFHLALDCCAELPDQR 555
DC I+++ + C A P+ R
Sbjct: 239 ----DCPQDIYNVMVQCWAHKPEDR 259
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 105/265 (39%), Gaps = 29/265 (10%)
Query: 299 LGSGGFGSVYKGILS--DGTTVAIKIFNLQLE-----QAFRSFNSECEVLRNVRHRNLIK 351
LG G FG V +G G TV++ + L+ + +A F E + ++ HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ K +V E P GSL L H + + VA + YL S
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKR 135
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-VIQTMTIATIGYMAPEFGSEGNV 470
+H DL N+LL + + DFG+ + L + DD V+Q + APE
Sbjct: 136 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTF 195
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFF 530
S D + +G+ L E FT + G L KE L R E
Sbjct: 196 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----------ERLPRPE--- 242
Query: 531 SARMDCLLSIFHLALDCCAELPDQR 555
DC I+++ + C A P+ R
Sbjct: 243 ----DCPQDIYNVMVQCWAHKPEDR 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 123
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 124 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 176
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 150
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 203
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 127
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 180
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 93/208 (44%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G + K L + F D + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALSYC 129
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S + T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLXGTLDYLPPEM 182
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 128
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 129 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 181
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 19/221 (8%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA---FRSFNSECEVLRNVR 345
+D + +LG GG V+ L VA+K+ L + + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 346 HRNLIKILSS----CCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-LNIMIDVALA 400
H ++ + ++ +V+E++ +L +++ P R + ++ D A
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPKRAIEVIADACQA 128
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT-IATIGY 459
L + H ++H D+KP+NI++ V DFGI++ + + +SV QT I T Y
Sbjct: 129 LNF---SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 460 MAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE 500
++PE +V ++ DVYS G +L E T + P FTG+
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 299 LGSGGFGSVY---KGILSDGT--TVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIKI 352
LG G FG V +DGT VA+K RS + E E+LR + H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 353 LSSCCNTNFKA--LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
C + K+ LV+E++P GSL +L H + L + + YLH H
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV--GLAQLLLFAQQICEGMAYLHAQH-- 132
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGN 469
+H L N+LLD + + + DFG++K + EG + ++ + + + APE E
Sbjct: 133 -YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 191
Query: 470 VSSKCDVYSYGILLLETFT 488
DV+S+G+ L E T
Sbjct: 192 FYYASDVWSFGVTLYELLT 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 124
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTXLCGTLDYLPPEM 177
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 299 LGSGGFGSVY---KGILSDGT--TVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIKI 352
LG G FG V +DGT VA+K RS + E E+LR + H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 353 LSSCCNTNFKA--LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
C + K+ LV+E++P GSL +L H + L + + YLH H
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCV--GLAQLLLFAQQICEGMAYLHAQH-- 131
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGN 469
+H L N+LLD + + + DFG++K + EG + ++ + + + APE E
Sbjct: 132 -YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECK 190
Query: 470 VSSKCDVYSYGILLLETFT 488
DV+S+G+ L E T
Sbjct: 191 FYYASDVWSFGVTLYELLT 209
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 124
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 177
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 127
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 180
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 129
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 182
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 37/228 (16%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRH 346
R F E +LG G FG V K + D AIK E+ + SE +L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNH 61
Query: 347 -------------RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNI 393
RN +K +++ + + +E+ N +L ++S N Q + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK-------------- 439
+ AL Y+H S ++H DLKP NI +DE+ + DFG++K
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 440 -LLGEGDDSVIQTMTIATIGYMAPE-FGSEGNVSSKCDVYSYGILLLE 485
L G D+ T I T Y+A E G+ + K D+YS GI+ E
Sbjct: 179 NLPGSSDN---LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 141
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 142 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 194
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 406 HGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 129
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEX 182
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 406 HGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 124
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTELCGTLDYLPPEM 177
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 93/206 (45%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 406 HGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNVRH 346
+ F+ LG G FG+VY + A+K+ F QLE+A E E+ ++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ + L+LE+ P G++ + L + F D + ++A AL Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALSYCH- 129
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
S V+H D+KP N+LL N ++DFG S S +T T+ Y+ PE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEMIE 183
Query: 467 EGNVSSKCDVYSYGILLLE 485
K D++S G+L E
Sbjct: 184 GRMHDEKVDLWSLGVLCYE 202
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQA-----FRSFNSECEVLRNVRHRNLIKIL 353
LGSG FG+V KG V + +A +E V++ + + +++++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
C ++ LV+E G L+K+L + + +D + + ++ V++ ++YL + V
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN---FV 133
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNVSS 472
H DL N+LL A +SDFG+SK L ++ QT + + APE + SS
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 473 KCDVYSYGILLLETFTR-KKPTDEMFTGEMN--LKNWVKESLPHGLPK 517
K DV+S+G+L+ E F+ +KP M E+ L+ + P G P+
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 241
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 91/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + S D+++ G ++ +
Sbjct: 208 EKSASKSSDLWALGCIIYQ 226
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 406 HGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 19/221 (8%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA---FRSFNSECEVLRNVR 345
+D + +LG GG V+ L VA+K+ L + + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 346 HRNLIKIL----SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-LNIMIDVALA 400
H ++ + + +V+E++ +L +++ P R + ++ D A
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPKRAIEVIADACQA 128
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT-IATIGY 459
L + H ++H D+KP+NI++ V DFGI++ + + +SV QT I T Y
Sbjct: 129 LNF---SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 460 MAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE 500
++PE +V ++ DVYS G +L E T + P FTG+
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 222
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS------DGTTVAIKIF-NLQLEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S VA+K + EQ F E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 406 HGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 406 HGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 287 ERATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLR 342
++ + F +LG G F +V L+ AIKI ++ E E +V+
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
+ H +K+ + + L + NG L K++ F + R ++ ALE
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 124
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH ++H DLKP NILL+E+M ++DFG +K+L + T Y++P
Sbjct: 125 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E +E + D+++ G ++ +
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQ 204
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + + A+K+ F QLE+A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ ++ L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 124
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S + T+ Y+ PE
Sbjct: 125 H---SKKVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEM 177
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 121
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 122 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPPEM 174
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 285 DLERATDGFNECNLLGSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSE 337
+ E A + LG G FG VY KG++ D T VAIK N R F +E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 338 CEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLN 392
V++ +++++L +++E M G L +L S N P L+
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 393 IMI----DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
MI ++A + YL+ + VH DL N ++ E+ + DFG+++ + E D
Sbjct: 124 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 180
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ + +M+PE +G ++ DV+S+G++L E T
Sbjct: 181 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 406 HGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 287 ERATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLR 342
++ + F +LG G F +V L+ AIKI ++ E E +V+
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
+ H +K+ + + L + NG L K++ F + R ++ ALE
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 123
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH ++H DLKP NILL+E+M ++DFG +K+L + T Y++P
Sbjct: 124 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E +E + D+++ G ++ +
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQ 203
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 406 HGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFN-SECEVLRNVRH 346
++ F + LG+G + +VYKG+ + G VA+K L E+ S E +++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA---LEY 403
N++++ N LV EFM N L K++ S + P L + + L+
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRT-VGNTPRGLELNLVKYFQWQLLQG 120
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
L H ++H DLKP N+L+++ + DFG+++ G ++ + + T+ Y AP+
Sbjct: 121 LAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--SSEVVTLWYRAPD 178
Query: 464 --FGSEGNVSSKCDVYSYGILLLETFTRK 490
GS S+ D++S G +L E T K
Sbjct: 179 VLMGSR-TYSTSIDIWSCGCILAEMITGK 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 287 ERATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLR 342
++ + F +LG G F +V L+ AIKI ++ E E +V+
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
+ H +K+ + + L + NG L K++ F + R ++ ALE
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 122
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH ++H DLKP NILL+E+M ++DFG +K+L + T Y++P
Sbjct: 123 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E +E + D+++ G ++ +
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQ 202
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQA-----FRSFNSECEVLRNVRHRNLIKIL 353
LGSG FG+V KG V + +A +E V++ + + +++++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
C ++ LV+E G L+K+L + + +D + + ++ V++ ++YL + V
Sbjct: 85 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN---FV 139
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNVSS 472
H DL N+LL A +SDFG+SK L ++ QT + + APE + SS
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 199
Query: 473 KCDVYSYGILLLETFTR-KKPTDEMFTGEMN--LKNWVKESLPHGLPK 517
K DV+S+G+L+ E F+ +KP M E+ L+ + P G P+
Sbjct: 200 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 247
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 19/221 (8%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA---FRSFNSECEVLRNVR 345
+D + +LG GG V+ L VA+K+ L + + F E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 346 HRNLIKIL----SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-LNIMIDVALA 400
H ++ + + +V+E++ +L +++ P R + ++ D A
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM--TPKRAIEVIADACQA 145
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT-IATIGY 459
L + H ++H D+KP+NI++ V DFGI++ + + +SV QT I T Y
Sbjct: 146 LNF---SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 202
Query: 460 MAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE 500
++PE +V ++ DVYS G +L E T + P FTG+
Sbjct: 203 LSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP----FTGD 239
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 406 HGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQA-----FRSFNSECEVLRNVRHRNLIKIL 353
LGSG FG+V KG V + +A +E V++ + + +++++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
C ++ LV+E G L+K+L + + +D + + ++ V++ ++YL + V
Sbjct: 93 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN---FV 147
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNVSS 472
H DL N+LL A +SDFG+SK L ++ QT + + APE + SS
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 207
Query: 473 KCDVYSYGILLLETFTR-KKPTDEMFTGEMN--LKNWVKESLPHGLPK 517
K DV+S+G+L+ E F+ +KP M E+ L+ + P G P+
Sbjct: 208 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 255
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQA-----FRSFNSECEVLRNVRHRNLIKIL 353
LGSG FG+V KG V + +A +E V++ + + +++++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
C ++ LV+E G L+K+L + + +D + + ++ V++ ++YL + V
Sbjct: 437 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN---FV 491
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNVSS 472
H DL N+LL A +SDFG+SK L ++ QT + + APE + SS
Sbjct: 492 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 551
Query: 473 KCDVYSYGILLLETFTR-KKPTDEMFTGEMN--LKNWVKESLPHGLPK 517
K DV+S+G+L+ E F+ +KP M E+ L+ + P G P+
Sbjct: 552 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 599
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 287 ERATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLR 342
++ + F +LG G F +V L+ AIKI ++ E E +V+
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
+ H +K+ + + L + NG L K++ F + R ++ ALE
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 121
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH ++H DLKP NILL+E+M ++DFG +K+L + T Y++P
Sbjct: 122 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E +E + D+++ G ++ +
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQ 201
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTT---VAIKIFNLQLEQAFRSF-NSECEVLRNVRHRN 348
F + +G G FG V+KGI D T VAIKI +L+ + E VL
Sbjct: 25 FTKLERIGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGH 408
+ K S + +++E++ GS L + + D I + L+ L + H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF-----DEFQIATMLKEILKGLDYLH 137
Query: 409 STPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEFGSE 467
S +H D+K +N+LL E ++DFG++ G+ D+ I+ T + T +MAPE +
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVA---GQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 468 GNVSSKCDVYSYGILLLETFTRKKPTDEM 496
SK D++S GI +E + P +M
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQA-----FRSFNSECEVLRNVRHRNLIKIL 353
LGSG FG+V KG V + +A +E V++ + + +++++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
C ++ LV+E G L+K+L + + +D + + ++ V++ ++YL + V
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN---FV 149
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNVSS 472
H DL N+LL A +SDFG+SK L ++ QT + + APE + SS
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 473 KCDVYSYGILLLETFTR-KKPTDEMFTGEMN--LKNWVKESLPHGLPK 517
K DV+S+G+L+ E F+ +KP M E+ L+ + P G P+
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 257
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQA-----FRSFNSECEVLRNVRHRNLIKIL 353
LGSG FG+V KG V + +A +E V++ + + +++++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
C ++ LV+E G L+K+L + + +D + + ++ V++ ++YL + V
Sbjct: 95 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN---FV 149
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNVSS 472
H DL N+LL A +SDFG+SK L ++ QT + + APE + SS
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 473 KCDVYSYGILLLETFTR-KKPTDEMFTGEMN--LKNWVKESLPHGLPK 517
K DV+S+G+L+ E F+ +KP M E+ L+ + P G P+
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 257
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQA-----FRSFNSECEVLRNVRHRNLIKIL 353
LGSG FG+V KG V + +A +E V++ + + +++++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
C ++ LV+E G L+K+L + + +D + + ++ V++ ++YL + V
Sbjct: 438 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN---FV 492
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNVSS 472
H DL N+LL A +SDFG+SK L ++ QT + + APE + SS
Sbjct: 493 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 552
Query: 473 KCDVYSYGILLLETFTR-KKPTDEMFTGEMN--LKNWVKESLPHGLPK 517
K DV+S+G+L+ E F+ +KP M E+ L+ + P G P+
Sbjct: 553 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 600
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 299 LGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
LG G FG VYK + G A K+ + E+ + E E+L H ++K+L +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+ +++EF P G++D + + P I + LE L+ HS ++H DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEP---QIQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 418 KPSNILLDENMVAHVSDFGIS----KLLGEGDDSVIQTMTIATIGYMAPEF-----GSEG 468
K N+L+ ++DFG+S K L + D I T +MAPE +
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS------FIGTPYWMAPEVVMCETMKDT 197
Query: 469 NVSSKCDVYSYGILLLETFTRKKPTDEM 496
K D++S GI L+E + P E+
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 406 HGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 125
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSC----HAPSSRRTTLSGTLDYLPPEM 178
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 124
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEM 177
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQA-----FRSFNSECEVLRNVRHRNLIKIL 353
LGSG FG+V KG V + +A +E V++ + + +++++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
C ++ LV+E G L+K+L + + +D + + ++ V++ ++YL + V
Sbjct: 79 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN---FV 133
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNVSS 472
H DL N+LL A +SDFG+SK L ++ QT + + APE + SS
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 473 KCDVYSYGILLLETFTR-KKPTDEMFTGEMN--LKNWVKESLPHGLPK 517
K DV+S+G+L+ E F+ +KP M E+ L+ + P G P+
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 241
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 406 HGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQA-----FRSFNSECEVLRNVRHRNLIKIL 353
LGSG FG+V KG V + +A +E V++ + + +++++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
C ++ LV+E G L+K+L + + +D + + ++ V++ ++YL + V
Sbjct: 75 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN---FV 129
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNVSS 472
H DL N+LL A +SDFG+SK L ++ QT + + APE + SS
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 189
Query: 473 KCDVYSYGILLLETFTR-KKPTDEMFTGEMN--LKNWVKESLPHGLPK 517
K DV+S+G+L+ E F+ +KP M E+ L+ + P G P+
Sbjct: 190 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 237
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 14/228 (6%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQA-----FRSFNSECEVLRNVRHRNLIKIL 353
LGSG FG+V KG V + +A +E V++ + + +++++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
C ++ LV+E G L+K+L + + +D + + ++ V++ ++YL + V
Sbjct: 73 GICEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLEESN---FV 127
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEFGSEGNVSS 472
H DL N+LL A +SDFG+SK L ++ QT + + APE + SS
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 187
Query: 473 KCDVYSYGILLLETFTR-KKPTDEMFTGEMN--LKNWVKESLPHGLPK 517
K DV+S+G+L+ E F+ +KP M E+ L+ + P G P+
Sbjct: 188 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR 235
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 125
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEM 178
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 285 DLERATDGFNECNLLGSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSE 337
+ E A + LG G FG VY KG++ D T VAIK N R F +E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 338 CEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLN 392
V++ +++++L +++E M G L +L S N P L+
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 393 IMI----DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
MI ++A + YL+ + VH DL N ++ E+ + DFG+++ + E D
Sbjct: 133 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXR 189
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ + +M+PE +G ++ DV+S+G++L E T
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 124
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEM 177
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 129
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S +T T+ Y+ PE
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPPEM 182
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + ++LE M G L +L P D L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 406 HGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 19/208 (9%)
Query: 299 LGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
LG G FG VYK + G A K+ + E+ + E E+L H ++K+L +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+ +++EF P G++D + + P I + LE L+ HS ++H DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEP---QIQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 418 KPSNILLDENMVAHVSDFGIS----KLLGEGDDSVIQTMTIATIGYMAPEF-----GSEG 468
K N+L+ ++DFG+S K L + D I T +MAPE +
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS------FIGTPYWMAPEVVMCETMKDT 189
Query: 469 NVSSKCDVYSYGILLLETFTRKKPTDEM 496
K D++S GI L+E + P E+
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + +++E M G L +L P D L++ D+A +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 406 HGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 131
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 132 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 190 EKSACKSSDLWALGCIIYQ 208
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 151 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 209 EKSACKSSDLWALGCIIYQ 227
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 124
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S + T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEM 177
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQA---FRSFNSECEVLRNVRHRNLIKI 352
LG G FG V D T + + +L+ E E E+LRN+ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 353 LSSCCNT--NFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
C N L++EF+P+GSL ++L + ++ +L + + ++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSR 145
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLL-GEGDDSVIQTMTIATIGYMAPEFGSEGN 469
VH DL N+L++ + DFG++K + + + ++ + + + APE +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 470 VSSKCDVYSYGILLLETFT 488
DV+S+G+ L E T
Sbjct: 206 FYIASDVWSFGVTLHELLT 224
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 147 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 205 EKSACKSSDLWALGCIIYQ 223
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 284 LDLERATDGFNECNLLGSGGFGSVYKGILSDGTT---VAIKIFNL-QLEQAFRSFNS--- 336
LD++ + + + LG G F +VYK D T VAIK L +A N
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKA--RDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 337 -ECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMI 395
E ++L+ + H N+I +L + + + +LV +FM + + N P + +
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDL--EVIIKDNSLVLTPSHIKAYM 118
Query: 396 DVAL-ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
+ L LEYLH ++H DLKP+N+LLDEN V ++DFG++K G + + +
Sbjct: 119 LMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH--QV 173
Query: 455 ATIGYMAPE--FGSEGNVSSKCDVYSYGILLLETFTR 489
T Y APE FG+ D+++ G +L E R
Sbjct: 174 VTRWYRAPELLFGAR-MYGVGVDMWAVGCILAELLLR 209
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 13/222 (5%)
Query: 286 LERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRS-FNSECEVLRN 343
+E D F + + LG+G G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 344 VRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL--NIMIDVALAL 401
++ + + ++ +E M GSLD+ L IP+++ + I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
YL H ++H D+KPSNIL++ + DFG+S G+ DS+ + + T YM+
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMS 171
Query: 462 PEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNL 503
PE + S + D++S G+ L+E + P E+ L
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 13/221 (5%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRS-FNSECEVLRNV 344
E D F + + LG+G G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL--NIMIDVALALE 402
++ + + ++ +E M GSLD+ L IP+++ + I V L
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLT 180
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YL H ++H D+KPSNIL++ + DFG+S G+ DS+ + + T YM+P
Sbjct: 181 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSP 234
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNL 503
E + S + D++S G+ L+E + P E+ L
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 275
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 208 EKSAXKSSDLWALGCIIYQ 226
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 286 LERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRS-FNSECEVLRN 343
+E D F + + LG+G G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 344 VRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL--NIMIDVALAL 401
++ + + ++ +E M GSLD+ L IP+++ + I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
YL H ++H D+KPSNIL++ + DFG+S G+ DS+ + + T YM+
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMS 171
Query: 462 PEFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
PE + S + D++S G+ L+E + P
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 13/222 (5%)
Query: 286 LERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRS-FNSECEVLRN 343
+E D F + + LG+G G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 344 VRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL--NIMIDVALAL 401
++ + + ++ +E M GSLD+ L IP+++ + I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
YL H ++H D+KPSNIL++ + DFG+S G+ DS+ + + T YM+
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMS 171
Query: 462 PEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNL 503
PE + S + D++S G+ L+E + P E+ L
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 13/222 (5%)
Query: 286 LERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRS-FNSECEVLRN 343
+E D F + + LG+G G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 344 VRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL--NIMIDVALAL 401
++ + + ++ +E M GSLD+ L IP+++ + I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
YL H ++H D+KPSNIL++ + DFG+S G+ DS+ + + T YM+
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMS 171
Query: 462 PEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNL 503
PE + S + D++S G+ L+E + P E+ L
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQA---FRSFNSECEVLRNVRHRNLIKI 352
LG G FG V D T + + +L+ E E E+LRN+ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 353 LSSCCNT--NFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
C N L++EF+P+GSL ++L + ++ +L + + ++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSR 133
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLL-GEGDDSVIQTMTIATIGYMAPEFGSEGN 469
VH DL N+L++ + DFG++K + + + ++ + + + APE +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 470 VSSKCDVYSYGILLLETFT 488
DV+S+G+ L E T
Sbjct: 194 FYIASDVWSFGVTLHELLT 212
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 287 ERATDGFNECNLLGSGGFGSVYKGILSDGTT---VAIK-IFNLQLEQAFRSFNSECEVLR 342
E D ++ ++LG+G F V + D T VAIK I LE S +E VL
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLH 71
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
++H N++ + + L+++ + G L + ++ + D ++ V A++
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIFQVLDAVK 130
Query: 403 YLHHGHSTPVVHCDLKPSNIL---LDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
YLH +VH DLKP N+L LDE+ +SDFG+SK+ G SV+ T T GY
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGY 184
Query: 460 MAPEFGSEGNVSSKCDVYSYGIL 482
+APE ++ S D +S G++
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 19/206 (9%)
Query: 299 LGSGGFGSVYKGILS----DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIK 351
LG G FG VY+G +S D + + + + L EQ F E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP------DRLNIMIDVALALEYLH 405
+ + + +++E M G L +L P D L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 406 HGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
H +H D+ N LL VA + DFG+++ + + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFT 488
E EG +SK D +S+G+LL E F+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 13/222 (5%)
Query: 286 LERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRS-FNSECEVLRN 343
+E D F + + LG+G G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 344 VRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL--NIMIDVALAL 401
++ + + ++ +E M GSLD+ L IP+++ + I V L
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGL 117
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
YL H ++H D+KPSNIL++ + DFG+S G+ DS+ + + T YM+
Sbjct: 118 TYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMS 171
Query: 462 PEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNL 503
PE + S + D++S G+ L+E + P E+ L
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 213
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 293 FNECNLLGSGGFGSVYKGILS--DGTTVAIKIFN----LQLEQAFRSFNSECEVLRNVRH 346
F LG+G FG V+ I S +G A+K+ ++L+Q + N E +L V H
Sbjct: 8 FQILRTLGTGSFGRVHL-IRSRHNGRYYAMKVLKKEIVVRLKQVEHT-NDERLMLSIVTH 65
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+I++ + + ++++++ G L L F + P +V LALEYLH
Sbjct: 66 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN-PVAKFYAAEVCLALEYLH- 123
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
S +++ DLKP NILLD+N ++DFG +K + + + T Y+APE S
Sbjct: 124 --SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVS 176
Query: 467 EGNVSSKCDVYSYGILLLETFTRKKP 492
+ D +S+GIL+ E P
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 152
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 153 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 211 EKSACKSSDLWALGCIIYQ 229
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNL--------QLEQAFRSFNSECEVLRN 343
++ +++G G V + + + G A+KI + QLE+ + E +LR
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 344 VR-HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V H ++I ++ S +++F LV + M G L +L + R +IM + A+
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR-SIMRSLLEAVS 214
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
+LH + +VH DLKP NILLD+NM +SDFG S L G+ ++ + T GY+AP
Sbjct: 215 FLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELC-GTPGYLAP 268
Query: 463 EF------GSEGNVSSKCDVYSYGILLLETFTRKKP 492
E + + D+++ G++L P
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 208 EKSACKSSDLWALGCIIYQ 226
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 287 ERATDGFNECNLLGSGGFGSVYKGILSDGTT---VAIK-IFNLQLEQAFRSFNSECEVLR 342
E D ++ ++LG+G F V + D T VAIK I LE S +E VL
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
++H N++ + + L+++ + G L + ++ + D ++ V A++
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIFQVLDAVK 130
Query: 403 YLHHGHSTPVVHCDLKPSNIL---LDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
YLH +VH DLKP N+L LDE+ +SDFG+SK+ G SV+ T T GY
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGY 184
Query: 460 MAPEFGSEGNVSSKCDVYSYGIL 482
+APE ++ S D +S G++
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 13/221 (5%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRS-FNSECEVLRNV 344
E D F + + LG+G G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL--NIMIDVALALE 402
++ + + ++ +E M GSLD+ L IP+++ + I V L
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLT 145
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YL H ++H D+KPSNIL++ + DFG+S G+ DS+ + + T YM+P
Sbjct: 146 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSP 199
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNL 503
E + S + D++S G+ L+E + P E+ L
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL 240
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 127
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPPEM 180
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 127
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPPEM 180
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGS-VYKGILSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F + V L+ AIKI ++ E E +V+ + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 206 EKSACKSSDLWALGCIIYQ 224
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 98/194 (50%), Gaps = 20/194 (10%)
Query: 297 NLLGSGGFGSVY--KGILSDGTTVAIKIFNLQLEQAFR--SFNSECEVLRNVRHRNLIKI 352
+LGSG F V+ K L+ G A+K ++ AFR S +E VL+ ++H N++ +
Sbjct: 15 EVLGSGAFSEVFLVKQRLT-GKLFALKC--IKKSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 353 LSSCCNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+T LV++ + G L D+ L Y + D ++ V A++YLH
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRILERGVYTEK--DASLVIQQVLSAVKYLHEN---G 126
Query: 412 VVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG 468
+VH DLKP N+L +EN ++DFG+SK+ G I + T GY+APE ++
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTPGYVAPEVLAQK 182
Query: 469 NVSSKCDVYSYGIL 482
S D +S G++
Sbjct: 183 PYSKAVDCWSIGVI 196
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 126
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S + T+ Y+ PE
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPPEM 179
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 151 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 209 EKSACKSSDLWALGCIIYQ 227
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 32/265 (12%)
Query: 248 LIALVFIFFLRRRNRST------KSPDDEELFSLATWRRTSYL--DLERATDGFNECNLL 299
L+ ++++F R+RN S + + E FS A Y+ + E A + L
Sbjct: 1 LVIMLYVFH-RKRNNSRLGNGVLYASVNPEYFSAAD----VYVPDEWEVAREKITMSREL 55
Query: 300 GSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSECEVLRNVRHRNLIKI 352
G G FG VY KG++ D T VAIK N R F +E V++ +++++
Sbjct: 56 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRL 115
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLNIMI----DVALALEY 403
L +++E M G L +L S N P L+ MI ++A + Y
Sbjct: 116 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 175
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
L+ + VH DL N ++ E+ + DFG+++ + E D + + +M+PE
Sbjct: 176 LN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 464 FGSEGNVSSKCDVYSYGILLLETFT 488
+G ++ DV+S+G++L E T
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 127
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL +++FG S S +T T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLPPEM 180
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 124
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S + T+ Y+ PE
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPPEM 177
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 126
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL +++FG S S +T T+ Y+ PE
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLPPEM 179
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + + L + NG L K++ F + R ++ ALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 147 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 205 EKSACKSSDLWALGCIIYQ 223
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 8/201 (3%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
F+ LG G +GSVYK I + G VAIK + +E + E +++ +++K
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIK--QVPVESDLQEIIKEISIMQQCDSPHVVK 88
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
S +V+E+ GS+ + N + I+ LEYLH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK-- 146
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVS 471
+H D+K NILL+ A ++DFG++ L D + I T +MAPE E +
Sbjct: 147 -IHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 472 SKCDVYSYGILLLETFTRKKP 492
D++S GI +E K P
Sbjct: 204 CVADIWSLGITAIEMAEGKPP 224
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 287 ERATDGFNECNLLGSGGFGSVYKGILSDGTT---VAIK-IFNLQLEQAFRSFNSECEVLR 342
E D ++ ++LG+G F V + D T VAIK I LE S +E VL
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
++H N++ + + L+++ + G L + ++ + D ++ V A++
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIFQVLDAVK 130
Query: 403 YLHHGHSTPVVHCDLKPSNIL---LDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
YLH +VH DLKP N+L LDE+ +SDFG+SK+ G SV+ T T GY
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGY 184
Query: 460 MAPEFGSEGNVSSKCDVYSYGIL 482
+APE ++ S D +S G++
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 120/287 (41%), Gaps = 51/287 (17%)
Query: 299 LGSGGFGSVYK----GIL--SDGTTVAIKIFNLQLEQAFRS-FNSECEVLRNVRHRNLIK 351
+G G FG V++ G+L T VA+K+ + ++ F E ++ + N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHN-------YFQDIPDR-------------- 390
+L C L+ E+M G L+++L S + D+ R
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 391 --LNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
L I VA + YL VH DL N L+ ENMV ++DFG+S+ + D
Sbjct: 175 EQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
I +M PE +++ DV++YG++L E F+ L+ +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS------------YGLQPY-- 277
Query: 509 ESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQR 555
+G+ +R+ N + +C L +++L C ++LP R
Sbjct: 278 ----YGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADR 320
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 297 NLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV------RHRNL 349
+ LG G FG V G G VA+KI N Q RS + ++ R + RH ++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILN---RQKIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 350 IKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHS 409
IK+ + +V+E++ G L ++ + + R + + ++Y H
Sbjct: 79 IKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESR-RLFQQILSGVDYCHRHM- 136
Query: 410 TPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGN 469
VVH DLKP N+LLD +M A ++DFG+S ++ +G+ + + Y APE S G
Sbjct: 137 --VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVIS-GR 190
Query: 470 VSS--KCDVYSYGILLLETFTRKKPTDE 495
+ + + D++S G++L P D+
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDD 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 287 ERATDGFNECNLLGSGGFGSVYKGILSDGTT---VAIK-IFNLQLEQAFRSFNSECEVLR 342
E D ++ ++LG+G F V + D T VAIK I LE S +E VL
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVI--LAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLH 71
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
++H N++ + + L+++ + G L + ++ + D ++ V A++
Sbjct: 72 KIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-RDASRLIFQVLDAVK 130
Query: 403 YLHHGHSTPVVHCDLKPSNIL---LDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
YLH +VH DLKP N+L LDE+ +SDFG+SK+ G SV+ T T GY
Sbjct: 131 YLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGY 184
Query: 460 MAPEFGSEGNVSSKCDVYSYGIL 482
+APE ++ S D +S G++
Sbjct: 185 VAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 36/256 (14%)
Query: 264 TKSPDDEELFSLATWRRTSY-LDLERATDGFNECNLLGSGGFGSVYK----GILSDGTT- 317
T S D+E + +R Y L E + +LGSG FG V GI G +
Sbjct: 19 TGSSDNEYFY--VDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSI 76
Query: 318 -VAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLIKILSSCCNTNFKALVLEFMPNGSL 374
VA+K+ + + + R + SE +++ + H N++ +L +C + L+ E+ G L
Sbjct: 77 QVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 375 DKWLYS--HNYFQD--------------------IPDRLNIMIDVALALEYLHHGHSTPV 412
+L S + +D D L VA +E+L
Sbjct: 137 LNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSC 193
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
VH DL N+L+ V + DFG+++ + + V++ + +MAPE EG +
Sbjct: 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTI 253
Query: 473 KCDVYSYGILLLETFT 488
K DV+SYGILL E F+
Sbjct: 254 KSDVWSYGILLWEIFS 269
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 125
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S T+ T+ Y+ PE
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDTLC-GTLDYLPPEM 178
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFN---LQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G FG V + G VA+KI N L E LR +RH ++IK+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ + +V+E+ N D ++ + + R + A+EY H +VH
Sbjct: 72 VIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEAR-RFFQQIISAVEYCHR---HKIVH 126
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS-EGNVSSK 473
DLKP N+LLDE++ ++DFG+S ++ +G+ + + Y APE S + +
Sbjct: 127 RDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPE 183
Query: 474 CDVYSYGILLLETFTRKKPTDE 495
DV+S G++L R+ P D+
Sbjct: 184 VDVWSCGVILYVMLCRRLPFDD 205
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNVRH 346
+ F+ LG G FG+VY + A+K+ F QLE+A E E+ ++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ + L+LE+ P G++ + L + F D + ++A AL Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALSYCH- 129
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
S V+H D+KP N+LL N ++DFG S S T+ T+ Y+ PE
Sbjct: 130 --SKRVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRDTLC-GTLDYLPPEMIE 183
Query: 467 EGNVSSKCDVYSYGILLLE 485
K D++S G+L E
Sbjct: 184 GRMHDEKVDLWSLGVLCYE 202
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 285 DLERATDGFNECNLLGSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSE 337
+ E A + LG G FG VY KG++ D T VAIK N R F +E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 338 CEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLN 392
V++ +++++L +++E M G L +L S N P L+
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 393 IMI----DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
MI ++A + YL+ + VH DL N ++ E+ + DFG+++ + E D
Sbjct: 126 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ + +M+PE +G ++ DV+S+G++L E T
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFN---LQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G FG V + G VA+KI N L E LR +RH ++IK+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ + +V+E+ N D ++ + + R + A+EY H +VH
Sbjct: 76 VIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEAR-RFFQQIISAVEYCHR---HKIVH 130
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS-EGNVSSK 473
DLKP N+LLDE++ ++DFG+S ++ +G+ + + Y APE S + +
Sbjct: 131 RDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPE 187
Query: 474 CDVYSYGILLLETFTRKKPTDE 495
DV+S G++L R+ P D+
Sbjct: 188 VDVWSCGVILYVMLCRRLPFDD 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 89/199 (44%), Gaps = 8/199 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIF---NLQLEQAFRSFNSECEVLRNVRH 346
+ F +LG G F +V L+ AIKI ++ E E +V+ + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+K+ + L + NG L K++ F + R ++ ALEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 154
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +
Sbjct: 155 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 467 EGNVSSKCDVYSYGILLLE 485
E + D+++ G ++ +
Sbjct: 213 EKSACKSSDLWALGCIIYQ 231
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFN---LQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G FG V + G VA+KI N L E LR +RH ++IK+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ + +V+E+ N D ++ + + R + A+EY H +VH
Sbjct: 81 VIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEAR-RFFQQIISAVEYCHR---HKIVH 135
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS-EGNVSSK 473
DLKP N+LLDE++ ++DFG+S ++ +G+ + + Y APE S + +
Sbjct: 136 RDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPE 192
Query: 474 CDVYSYGILLLETFTRKKPTDE 495
DV+S G++L R+ P D+
Sbjct: 193 VDVWSCGVILYVMLCRRLPFDD 214
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 13/202 (6%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFN---LQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G FG V + G VA+KI N L E LR +RH ++IK+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ + +V+E+ N D ++ + + R + A+EY H +VH
Sbjct: 82 VIKSKDEIIMVIEYAGNELFD-YIVQRDKMSEQEAR-RFFQQIISAVEYCHR---HKIVH 136
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS-EGNVSSK 473
DLKP N+LLDE++ ++DFG+S ++ +G+ + + Y APE S + +
Sbjct: 137 RDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAGPE 193
Query: 474 CDVYSYGILLLETFTRKKPTDE 495
DV+S G++L R+ P D+
Sbjct: 194 VDVWSCGVILYVMLCRRLPFDD 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 17/235 (7%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRS-FNSECEVLRNV 344
E D F + + LG+G G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL--NIMIDVALALE 402
++ + + ++ +E M GSLD+ L IP+++ + I V L
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLT 121
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSVIQTMTIATIGYMA 461
YL H ++H D+KPSNIL++ + DFG+S +L+ E + + T + YM+
Sbjct: 122 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS-----YMS 174
Query: 462 PEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLP 516
PE + S + D++S G+ L+E + P M E L +++ P LP
Sbjct: 175 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFE--LLDYIVNEPPPKLP 227
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 13/210 (6%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRS-FNSECEVLRNV 344
E D F + + LG+G G V+K G +A K+ +L+++ A R+ E +VL
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL--NIMIDVALALE 402
++ + + ++ +E M GSLD+ L IP+++ + I V L
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLT 137
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YL H ++H D+KPSNIL++ + DFG+S G+ DS+ + + T YM+P
Sbjct: 138 YLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSP 191
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
E + S + D++S G+ L+E + P
Sbjct: 192 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 285 DLERATDGFNECNLLGSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSE 337
+ E A + LG G FG VY KG++ D T VAIK N R F +E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 338 CEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLN 392
V++ +++++L +++E M G L +L S N P L+
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 393 IMI----DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
MI ++A + YL+ + VH DL N ++ E+ + DFG+++ + E D
Sbjct: 130 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 186
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ + +M+PE +G ++ DV+S+G++L E T
Sbjct: 187 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 285 DLERATDGFNECNLLGSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSE 337
+ E A + LG G FG VY KG++ D T VAIK N R F +E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 338 CEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLN 392
V++ +++++L +++E M G L +L S N P L+
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 393 IMI----DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
MI ++A + YL+ + VH DL N ++ E+ + DFG+++ + E D
Sbjct: 132 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ + +M+PE +G ++ DV+S+G++L E T
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 285 DLERATDGFNECNLLGSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSE 337
+ E A + LG G FG VY KG++ D T VAIK N R F +E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 338 CEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLN 392
V++ +++++L +++E M G L +L S N P L+
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 393 IMI----DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
MI ++A + YL+ + VH DL N ++ E+ + DFG+++ + E D
Sbjct: 132 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 188
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ + +M+PE +G ++ DV+S+G++L E T
Sbjct: 189 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 285 DLERATDGFNECNLLGSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSE 337
+ E A + LG G FG VY KG++ D T VAIK N R F +E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 338 CEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLN 392
V++ +++++L +++E M G L +L S N P L+
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 393 IMI----DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
MI ++A + YL+ + VH DL N ++ E+ + DFG+++ + E D
Sbjct: 139 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ + +M+PE +G ++ DV+S+G++L E T
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 285 DLERATDGFNECNLLGSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSE 337
+ E A + LG G FG VY KG++ D T VAIK N R F +E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 338 CEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLN 392
V++ +++++L +++E M G L +L S N P L+
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 393 IMI----DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
MI ++A + YL+ + VH DL N ++ E+ + DFG+++ + E D
Sbjct: 133 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 189
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ + +M+PE +G ++ DV+S+G++L E T
Sbjct: 190 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQA--FRSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 150
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S + T+ Y+ PE
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLPPEM 203
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 14/209 (6%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDGTTV-AIKIFNLQL---EQAFRSFNSECEVLRNVRH 346
D F +G G FG V +D + A+K N Q R+ E ++++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
L+ + S + +V++ + G L L + +F++ +L I ++ +AL+YL +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI-CELVMALDYLQN 133
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
++H D+KP NILLDE+ H++DF I+ +L ++ I TM T YMAPE S
Sbjct: 134 QR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITTMA-GTKPYMAPEMFS 187
Query: 467 E---GNVSSKCDVYSYGILLLETFTRKKP 492
S D +S G+ E ++P
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 297 NLLGSGGFGSVYKGILSDGTT----VAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIK 351
++G G FG VY G D AIK + E Q +F E ++R + H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 352 ILSSCCNTN-FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
++ ++L +M +G L +++ S + D ++ + VA +EYL
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQ 143
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA--TIGYMAPEFGSEG 468
VH DL N +LDE+ V+DFG+++ + + + +Q A + + A E
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 469 NVSSKCDVYSYGILLLETFTRKKP 492
++K DV+S+G+LL E TR P
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKI-FNLQLEQAF--RSFNSECEVLRNV 344
A + F LG G FG+VY + A+K+ F QLE+A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
RH N++++ + L+LE+ P G++ + L + F D + ++A AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALSYC 127
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S V+H D+KP N+LL ++DFG S S + T+ Y+ PE
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLPPEM 180
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
K D++S G+L E K P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 299 LGSGGFGSVY-KGILSDGTTVAIKIFNLQLEQA-FRSFNSECEVLRNVRHRNLIKILSSC 356
LGSG FG V+ S G IK N Q +E EVL+++ H N+IKI
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR---LNIMIDVALALEYLHHGHSTPVV 413
+ + +V+E G L + + S +M + AL Y H H VV
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VV 146
Query: 414 HCDLKPSNILLDE---NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNV 470
H DLKP NIL + + + DFG+++L + S T T YMAPE +V
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPEVFKR-DV 202
Query: 471 SSKCDVYSYGILL 483
+ KCD++S G+++
Sbjct: 203 TFKCDIWSAGVVM 215
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTT---VAIKIFNLQLEQAFRSF-NSECEVLRNVRHRN 348
F + +G G FG V+KGI D T VAIKI +L+ + E VL
Sbjct: 9 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGH 408
+ K S +++E++ GS L D I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL--DETQIATILREILKGLDYLH--- 121
Query: 409 STPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEFGSE 467
S +H D+K +N+LL E+ ++DFG++ G+ D+ I+ T + T +MAPE +
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 468 GNVSSKCDVYSYGILLLETFTRKKPTDEM 496
SK D++S GI +E + P E+
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECE 339
E D N LG G FG V + GI T TVA+K+ + R+ SE +
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 340 VLRNVRHR-NLIKILSSCCNTNFKALVL-EFMPNGSLDKWLYS-----------HNYFQD 386
+L ++ H N++ +L +C +V+ EF G+L +L S + F
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 387 IPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446
+ + VA +E+L S +H DL NILL E V + DFG+++ + + D
Sbjct: 143 LEHLIXYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPD 199
Query: 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
V + + +MAPE + + + DV+S+G+LL E F+
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 285 DLERATDGFNECNLLGSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSE 337
+ E A + LG G FG VY KG++ D T VAIK N R F +E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 338 CEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLN 392
V++ +++++L +++E M G L +L S N P L+
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 393 IMI----DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
MI ++A + YL+ + VH DL N ++ E+ + DFG+++ + E D
Sbjct: 129 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 185
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ + +M+PE +G ++ DV+S+G++L E T
Sbjct: 186 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 285 DLERATDGFNECNLLGSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSE 337
+ E A + LG G FG VY KG++ D T VAIK N R F +E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 338 CEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLN 392
V++ +++++L +++E M G L +L S N P L+
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 393 IMI----DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
MI ++A + YL+ + VH DL N ++ E+ + DFG+++ + E D
Sbjct: 139 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ + +M+PE +G ++ DV+S+G++L E T
Sbjct: 196 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 299 LGSGGFGSVYKGILSDGTTVAI-KIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
LG G FG VYK + + +A K+ + + E+ + E ++L + H N++K+L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
N +++EF G++D + + I + L+ L++ H ++H DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMAPEF-----GSEGNV 470
K NIL + ++DFG+S + IQ I T +MAPE +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSA----KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEM 496
K DV+S GI L+E + P E+
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTT---VAIKIFNLQLEQAFRSF-NSECEVLRNVRHRN 348
F + +G G FG V+KGI D T VAIKI +L+ + E VL
Sbjct: 24 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGH 408
+ K S +++E++ GS L D I+ ++ L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL--DETQIATILREILKGLDYLH--- 136
Query: 409 STPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG 468
S +H D+K +N+LL E+ ++DFG++ L D + + + T +MAPE +
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 469 NVSSKCDVYSYGILLLETFTRKKPTDEM 496
SK D++S GI +E + P E+
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 103/240 (42%), Gaps = 28/240 (11%)
Query: 260 RNRSTKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGI-LSDGTTV 318
R S K PD ELF D E+ F++ +G G FG+VY + + V
Sbjct: 34 RAGSLKDPDVAELFFKD--------DPEKL---FSDLREIGHGSFGAVYFARDVRNSEVV 82
Query: 319 AIKIFNLQLEQA---FRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLD 375
AIK + +Q+ ++ E L+ +RH N I+ + LV+E+ + D
Sbjct: 83 AIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD 142
Query: 376 KWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDF 435
Q++ I AL+ L + HS ++H D+K NILL E + + DF
Sbjct: 143 LLEVHKKPLQEV----EIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDF 198
Query: 436 GISKLLGEGDDSVIQTMTIATIGYMAPEF---GSEGNVSSKCDVYSYGILLLETFTRKKP 492
G + ++ + V T +MAPE EG K DV+S GI +E RK P
Sbjct: 199 GSASIMAPANXFV------GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 13/208 (6%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTT---VAIKIFNLQLEQAFRSF-NSECEVLRNVRHRN 348
F + +G G FG V+KGI D T VAIKI +L+ + E VL
Sbjct: 9 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGH 408
+ K S +++E++ GS L D I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL--DETQIATILREILKGLDYLH--- 121
Query: 409 STPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG 468
S +H D+K +N+LL E+ ++DFG++ L D + + + T +MAPE +
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 469 NVSSKCDVYSYGILLLETFTRKKPTDEM 496
SK D++S GI +E + P E+
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+G G G+VY + ++ G VAI+ NLQ + +E V+R ++ N++ L S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+ +V+E++ GSL + + D I L+ L HS V+H D+
Sbjct: 88 VGDELWVVMEYLAGGSL-----TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDI 142
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
K NILL + ++DFG + + S TM + T +MAPE + K D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTM-VGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 478 SYGILLLETFTRKKP 492
S GI+ +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 118/280 (42%), Gaps = 38/280 (13%)
Query: 293 FNECNLLGSGGFGSVYKGIL--SDGTTVAIKIFNLQLE----QAFRSFNSECEVLRNVRH 346
F +LG G FGSV + L DG+ V + + L+ + F E ++ H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 347 RNLIKILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQD-----IPDRLNIMI 395
++ K++ + K ++L FM +G L +L + ++ + + M+
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 396 DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA 455
D+A +EYL S +H DL N +L E+M V+DFG+S+ + GD +
Sbjct: 145 DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGL 515
+ ++A E ++ + DV+++G+ + E TR + + G N + +
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP---YAGIENAEIY--------- 249
Query: 516 PKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQR 555
N L N +C+ ++ L C + P QR
Sbjct: 250 ------NYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQR 283
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 299 LGSGGFGSVYKGILSDGTTVAI-KIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
LG G FG VYK + + +A K+ + + E+ + E ++L + H N++K+L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
N +++EF G++D + + I + L+ L++ H ++H DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMAPEF-----GSEGNV 470
K NIL + ++DFG+S + IQ I T +MAPE +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSA----KNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPY 217
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEM 496
K DV+S GI L+E + P E+
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTT---VAIKIFNLQLEQAFRSF-NSECEVLRNVRHRN 348
F + +G G FG V+KGI D T VAIKI +L+ + E VL
Sbjct: 29 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGH 408
+ K S +++E++ GS L D I+ ++ L+YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPL--DETQIATILREILKGLDYLH--- 141
Query: 409 STPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEFGSE 467
S +H D+K +N+LL E+ ++DFG++ G+ D+ I+ T + T +MAPE +
Sbjct: 142 SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 468 GNVSSKCDVYSYGILLLETFTRKKPTDEM 496
SK D++S GI +E + P E+
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 299 LGSGGFGSVYKGILSDGTTVAI-KIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
LG G FG VYK + + +A K+ + + E+ + E ++L + H N++K+L +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
N +++EF G++D + + I + L+ L++ H ++H DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMAPEF-----GSEGNV 470
K NIL + ++DFG+S + IQ I T +MAPE +
Sbjct: 162 KAGNILFTLDGDIKLADFGVSA----KNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPY 217
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEM 496
K DV+S GI L+E + P E+
Sbjct: 218 DYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 13/210 (6%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRS-FNSECEVLRNV 344
E D F + LG+G G V K G +A K+ +L+++ A R+ E +VL
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL--NIMIDVALALE 402
++ + + ++ +E M GSLD+ L + IP+ + + I V L
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA---KRIPEEILGKVSIAVLRGLA 128
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YL H ++H D+KPSNIL++ + DFG+S G+ DS+ + + T YMAP
Sbjct: 129 YLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMAP 182
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
E + S + D++S G+ L+E + P
Sbjct: 183 ERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 99/220 (45%), Gaps = 19/220 (8%)
Query: 285 DLERATDGFNECNLLGSGGFGSVY----KGILSDG--TTVAIKIFNLQLEQAFR-SFNSE 337
+ E A + LG G FG VY KG++ D T VAIK N R F +E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 338 CEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLN 392
V++ +++++L +++E M G L +L S N P L+
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 393 IMI----DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
MI ++A + YL+ + VH DL N + E+ + DFG+++ + E D
Sbjct: 126 KMIQMAGEIADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYR 182
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ + +M+PE +G ++ DV+S+G++L E T
Sbjct: 183 KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 11/216 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTT----VAIKIFNLQLE-QAFRSFNSECEVLRNVRH 346
+ +LGSG FG+VYKGI + DG VAIK+ +A + E V+ V
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
+ ++L C + + LV + MP G L + + D LN + +A + YL
Sbjct: 79 PYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYL-- 135
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
+VH DL N+L+ ++DFG+++LL + I +MA E
Sbjct: 136 -EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 467 EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEM 501
+ + DV+SYG+ + E T KP D + E+
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI 230
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 95/228 (41%), Gaps = 37/228 (16%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRH 346
R F E +LG G FG V K + D AIK E+ + SE +L ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNH 61
Query: 347 -------------RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNI 393
RN +K ++ + + E+ N +L ++S N Q + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK-------------- 439
+ AL Y+H S ++H +LKP NI +DE+ + DFG++K
Sbjct: 122 FRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 440 -LLGEGDDSVIQTMTIATIGYMAPE-FGSEGNVSSKCDVYSYGILLLE 485
L G D+ T I T Y+A E G+ + K D YS GI+ E
Sbjct: 179 NLPGSSDN---LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 299 LGSGGFGSVYKGILSD------GTTVAIKIFNLQLEQAFR-SFNSECEVLRNVRHRNLIK 351
LG G FG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLNIMIDVALAL-EYLH 405
+L +V+E M +G L +L S N P L MI +A + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
+ ++ VH DL N ++ + + DFG+++ + E D + + +MAPE
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 204
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+G ++ D++S+G++L E
Sbjct: 205 KDGVFTTSSDMWSFGVVLWE 224
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 299 LGSGGFGSVYKGILSD------GTTVAIKIFNLQLEQAFR-SFNSECEVLRNVRHRNLIK 351
LG G FG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLNIMIDVALAL-EYLH 405
+L +V+E M +G L +L S N P L MI +A + + +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
+ ++ VH DL N ++ + + DFG+++ + E D + + +MAPE
Sbjct: 142 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 201
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+G ++ D++S+G++L E
Sbjct: 202 KDGVFTTSSDMWSFGVVLWE 221
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+G G G+VY + ++ G VAI+ NLQ + +E V+R ++ N++ L S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+ +V+E++ GSL + + D I L+ L HS V+H D+
Sbjct: 88 VGDELWVVMEYLAGGSL-----TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDI 142
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
K NILL + ++DFG + ++ + T +MAPE + K D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 478 SYGILLLETFTRKKP 492
S GI+ +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRNVRHRN 348
+ + + +G G +G VYK S G VA+K L E + E +L+ + H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNY-FQDIPDRLNIMIDVALALEYLHHG 407
++ ++ + LV EFM L K L + QD I I + L + H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDS----QIKIYLYQLLRGVAHC 135
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
H ++H DLKP N+L++ + ++DFG+++ G S T + T+ Y AP+ G
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMG 193
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
S+ S+ D++S G + E T K
Sbjct: 194 SK-KYSTSVDIWSIGCIFAEMITGK 217
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 299 LGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECEVLRNVRHR-NLI 350
LG G FG V + GI T TVA+K+ + R+ SE ++L ++ H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 351 KILSSCCNTNFKALVL-EFMPNGSLDKWLYS-------------HNYFQDIPDRLNIMID 396
+L +C +V+ EF G+L +L S + F + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 157 VAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRNVRHRN 348
+ + + +G G +G VYK S G VA+K L E + E +L+ + H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNY-FQDIPDRLNIMIDVALALEYLHHG 407
++ ++ + LV EFM L K L + QD I I + L + H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDS----QIKIYLYQLLRGVAHC 135
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
H ++H DLKP N+L++ + ++DFG+++ G S T + T+ Y AP+ G
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMG 193
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
S+ S+ D++S G + E T K
Sbjct: 194 SK-KYSTSVDIWSIGCIFAEMITGK 217
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+G G G+VY + ++ G VAI+ NLQ + +E V+R ++ N++ L S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+ +V+E++ GSL + + D I L+ L HS V+H D+
Sbjct: 89 VGDELWVVMEYLAGGSL-----TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDI 143
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
K NILL + ++DFG + ++ + T +MAPE + K D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 478 SYGILLLETFTRKKP 492
S GI+ +E + P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 299 LGSGGFGSVYKGILSD------GTTVAIKIFNLQLEQAFR-SFNSECEVLRNVRHRNLIK 351
LG G FG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLNIMIDVALAL-EYLH 405
+L +V+E M +G L +L S N P L MI +A + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
+ ++ VH DL N ++ + + DFG+++ + E D + + +MAPE
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 204
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+G ++ D++S+G++L E
Sbjct: 205 KDGVFTTSSDMWSFGVVLWE 224
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECE 339
E D N LG G FG V + GI T TVA+K+ + R+ SE +
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 340 VLRNVRHR-NLIKILSSCCNTNFKALVL-EFMPNGSLDKWLYS-----------HNYFQD 386
+L ++ H N++ +L +C +V+ EF G+L +L S + F
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 387 IPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446
+ + VA +E+L S +H DL NILL E V + DFG+++ + + D
Sbjct: 143 LEHLICYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
V + + +MAPE + + + DV+S+G+LL E F+
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 292 GFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLI 350
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N++
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 77
Query: 351 KILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
++ ++ K LVL+++P + Q +P + + + + L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSL 136
Query: 405 HHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 137 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 193
Query: 464 --FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 194 LIFGAT-DYTSSIDVWSAGCVLAE 216
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 292 GFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLI 350
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 351 KILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
++ ++ K LVL+++P + Q +P + + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSL 135
Query: 405 HHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 192
Query: 464 --FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 193 LIFGAT-DYTSSIDVWSAGCVLAE 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 17/207 (8%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNL---QLEQAFRSFNSECEVLRNVRHRN 348
F++ +G G FG+VY + + VAIK + Q + ++ E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGH 408
I+ + LV+E+ + D Q++ I AL+ L + H
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEV----EIAAVTHGALQGLAYLH 132
Query: 409 STPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF---G 465
S ++H D+K NILL E + + DFG + ++ + + T +MAPE
Sbjct: 133 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVILAM 186
Query: 466 SEGNVSSKCDVYSYGILLLETFTRKKP 492
EG K DV+S GI +E RK P
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 292 GFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLI 350
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N++
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 84
Query: 351 KILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
++ ++ K LVL+++P + Q +P + + + + L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSL 143
Query: 405 HHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 144 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 200
Query: 464 --FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 201 LIFGAT-DYTSSIDVWSAGCVLAE 223
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 292 GFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLI 350
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 351 KILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
++ ++ K LVL+++P + Q +P + + + + L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSL 135
Query: 405 HHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 192
Query: 464 --FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 193 LIFGAT-DYTSSIDVWSAGCVLAE 215
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 89
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 148
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 205
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 206 IFGAT-DYTSSIDVWSAGCVLAE 227
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 89
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 148
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 205
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 206 IFGAT-DYTSSIDVWSAGCVLAE 227
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 100/210 (47%), Gaps = 13/210 (6%)
Query: 291 DGFNECNLLGSGGFGSVYKG-ILSDGTTVAIKIFN---LQLEQAFRSFNSECEVLRNVRH 346
+ F NLLG G F VY+ + G VAIK+ + + + +E ++ ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLH 405
+++++ + ++N+ LVLE NG ++++L + F + R + M + + YLH
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGMLYLH 129
Query: 406 -HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
HG ++H DL SN+LL NM ++DFG++ L + T Y++PE
Sbjct: 130 SHG----ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYISPEI 183
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKPTD 494
+ + DV+S G + + P D
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 292 GFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLI 350
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 351 KILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
++ ++ K LVL+++P + Q +P + + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSL 135
Query: 405 HHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 192
Query: 464 --FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 193 LIFGAT-DYTSSIDVWSAGCVLAE 215
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 9/195 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNL 349
D ++ LGSG FG V++ + + G K N + +E ++ + H L
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKL 110
Query: 350 IKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHS 409
I + + + L+LEF+ G L + + +Y + +N M A E L H H
Sbjct: 111 INLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM---RQACEGLKHMHE 167
Query: 410 TPVVHCDLKPSNILLDENMVAHVS--DFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+VH D+KP NI+ + + V DFG++ L + I +T AT + APE
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDR 224
Query: 468 GNVSSKCDVYSYGIL 482
V D+++ G+L
Sbjct: 225 EPVGFYTDMWAIGVL 239
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 292 GFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLI 350
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N++
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 95
Query: 351 KILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
++ ++ K LVL+++P + Q +P + + + + L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSL 154
Query: 405 HHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 155 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPE 211
Query: 464 --FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 212 LIFGAT-DYTSSIDVWSAGCVLAE 234
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 8/195 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+G G G+VY + ++ G VAI+ NLQ + +E V+R ++ N++ L S
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+ +V+E++ GSL + + D I L+ L HS V+H D+
Sbjct: 88 VGDELWVVMEYLAGGSL-----TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDI 142
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
K NILL + ++DFG + ++ + T +MAPE + K D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 478 SYGILLLETFTRKKP 492
S GI+ +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 111
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 170
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 227
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 228 IFGAT-DYTSSIDVWSAGCVLAE 249
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 26/225 (11%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECE 339
E D N LG G FG V + GI T TVA+K+ + R+ SE +
Sbjct: 24 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 83
Query: 340 VLRNVRHR-NLIKILSSCCNTNFKALVL-EFMPNGSLDKWLYS--------------HNY 383
+L ++ H N++ +L +C +V+ EF G+L +L S +
Sbjct: 84 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKD 143
Query: 384 FQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443
F + + VA +E+L S +H DL NILL E V + DFG+++ + +
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
D V + + +MAPE + + + DV+S+G+LL E F+
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 81
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 140
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 141 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 197
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 198 IFGAT-DYTSSIDVWSAGCVLAE 219
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 85
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 144
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEF 464
S +++ DLKP N+L+D+ V+DFG +K + +T T+ T Y+APE
Sbjct: 145 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEI 195
Query: 465 GSEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 196 ILSKGYNKAVDWWALGVLIYE 216
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 292 GFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLI 350
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N++
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 89
Query: 351 KILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
++ ++ K LVL+++P + Q +P + + + + L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSL 148
Query: 405 HHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 149 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 205
Query: 464 --FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 206 LIFGAT-DYTSSIDVWSAGCVLAE 228
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 292 GFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLI 350
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N++
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 351 KILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
++ ++ K LVL+++P + Q +P + + + + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSL 135
Query: 405 HHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 136 AYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPE 192
Query: 464 --FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 193 LIFGAT-DYTSSIDVWSAGCVLAE 215
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 17/201 (8%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEF 464
S +++ DLKP N+L+D+ V+DFG +K + +T T+ T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWTLCGTPEYLAPEI 210
Query: 465 GSEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 ILSKGYNKAVDWWALGVLIYE 231
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 82
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 141
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 142 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 198
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 199 IFGAT-DYTSSIDVWSAGCVLAE 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 27/214 (12%)
Query: 299 LGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECEVLRNVRHR-NLI 350
LG G FG V + GI T TVA+K+ + R+ SE ++L ++ H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 351 KILSSCCNTNFKALVL-EFMPNGSLDKWLYSHNY----FQDIPDRLN-----------IM 394
+L +C +V+ EF G+L +L S +++ P+ L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 157 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 302 GGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRN--VRHRNLIK-ILSSCCN 358
G FG V+K L + VA+KIF LQ +Q S+ SE E+ ++H NL++ I +
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIFPLQDKQ---SWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 359 TNFKA---LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH--------G 407
+N + L+ F GSL +L + + + ++ ++ L YLH G
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGNIITWN--ELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
H + H D K N+LL ++ A ++DFG++ G + T YMAPE E
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV-LE 198
Query: 468 GNVSS------KCDVYSYGILLLETFTRKKPTD 494
G ++ + D+Y+ G++L E +R K D
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 111
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 170
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 227
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 228 IFGAT-DYTSSIDVWSAGCVLAE 249
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 105
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 164
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 165 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 221
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 222 IFGAT-DYTSSIDVWSAGCVLAE 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 299 LGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECEVLRNVRHR-NLI 350
LG G FG V + GI T TVA+K+ + R+ SE ++L ++ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 351 KILSSCCNTNFKALVL-EFMPNGSLDKWLYS---------------HNYFQDIPDRLNIM 394
+L +C +V+ EF G+L +L S + F + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 115
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 174
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 175 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 231
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 232 IFGAT-DYTSSIDVWSAGCVLAE 253
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 156
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 215
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 216 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 272
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 273 IFGAT-DYTSSIDVWSAGCVLAE 294
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK ++ Q R N E +++R + H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 113
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 172
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 173 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 229
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 230 IFGAT-DYTSSIDVWSAGCVLAE 251
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 299 LGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECEVLRNVRHR-NLI 350
LG G FG V + GI T TVA+K+ + R+ SE ++L ++ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 351 KILSSCCNTNFKALVL-EFMPNGSLDKWLYS---------------HNYFQDIPDRLNIM 394
+L +C +V+ EF G+L +L S + F + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
Query: 290 TDGFNECNLLGSGGFGSVYKGILSDGTTV--AIKIFNLQLEQAFRSFNSECEVL-RNVRH 346
TDG+ +G G + SV K + T + A+KI ++++ R E E+L R +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKI----IDKSKRDPTEEIEILLRYGQH 75
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N+I + + + +V E M G L + +F + + ++ + +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH- 133
Query: 407 GHSTPVVHCDLKPSNIL-LDEN---MVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
+ VVH DLKPSNIL +DE+ + DFG +K L ++ ++ T T ++AP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMT-PCYTANFVAP 189
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
E + CD++S G+LL T P
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 299 LGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECEVLRNVRHR-NLI 350
LG G FG V + GI T TVA+K+ + R+ SE ++L ++ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 351 KILSSCCNTNFKALVL-EFMPNGSLDKWLYS---------------HNYFQDIPDRLNIM 394
+L +C +V+ EF G+L +L S + F + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 155 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTT---VAIKIFNLQLEQAFRSF-NSECEVLRNVRHRN 348
F + + +G G FG VYKGI D T VAIKI +L+ + E VL
Sbjct: 21 FTKLDRIGKGSFGEVYKGI--DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 349 LIKILSSCCNTNFKALVLEFMPNGS----LDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
+ + S + +++E++ GS L Y I+ ++ L+YL
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIA------TILREILKGLDYL 132
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H S +H D+K +N+LL E ++DFG++ L D + + + T +MAPE
Sbjct: 133 H---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEV 187
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKPTDEM 496
+ K D++S GI +E + P ++
Sbjct: 188 IKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 288 RATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNL--QLEQAFRSFNSECEVLRNV 344
RA D + +G+G +G K SDG + K + E + SE +LR +
Sbjct: 4 RAED-YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 345 RHRNLIKILSSCCNTNFKAL--VLEFMPNGSLDKWLYSHNYFQDIPDR---LNIMIDVAL 399
+H N+++ + L V+E+ G L + + D L +M + L
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 400 ALEYLHH----GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA 455
AL+ H GH+ V+H DLKP+N+ LD + DFG++++L D S +T +
Sbjct: 123 ALKECHRRSDGGHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKTF-VG 178
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGILLLE 485
T YM+PE + + + K D++S G LL E
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+G G G+VY + ++ G VAI+ NLQ + +E V+R ++ N++ L S
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDL 417
+ +V+E++ GSL + + D I L+ L HS V+H ++
Sbjct: 89 VGDELWVVMEYLAGGSL-----TDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNI 143
Query: 418 KPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVY 477
K NILL + ++DFG + + S TM + T +MAPE + K D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTM-VGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 478 SYGILLLETFTRKKP 492
S GI+ +E + P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 17/210 (8%)
Query: 288 RATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNL--QLEQAFRSFNSECEVLRNV 344
RA D + +G+G +G K SDG + K + E + SE +LR +
Sbjct: 4 RAED-YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 345 RHRNLIKILSSCCNTNFKAL--VLEFMPNGSLDKWLYSHNYFQDIPDR---LNIMIDVAL 399
+H N+++ + L V+E+ G L + + D L +M + L
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 400 ALEYLHH----GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA 455
AL+ H GH+ V+H DLKP+N+ LD + DFG++++L +D + +
Sbjct: 123 ALKECHRRSDGGHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--FVG 178
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGILLLE 485
T YM+PE + + + K D++S G LL E
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 9/204 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGS 466
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 467 EGNVSSKCDVYSYGILLLETFTRK 490
S+ D++S G + E TR+
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 299 LGSGGFGSVYKGILSD------GTTVAIKIFNLQLEQAFR-SFNSECEVLRNVRHRNLIK 351
LG G FG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLNIMIDVALAL-EYLH 405
+L +V+E M +G L +L S N P L MI +A + + +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
+ ++ VH DL N ++ + + DFG+++ + E D + + +MAPE
Sbjct: 144 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 203
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+G ++ D++S+G++L E
Sbjct: 204 KDGVFTTSSDMWSFGVVLWE 223
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK + +AF+ N E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 136
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 194 IFGAT-DYTSSIDVWSAGCVLAE 215
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA--FRSFNSECEVLRNVRH 346
+D ++ LG G F V + + + G A KI N + A F+ E + R ++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ S +F LV + + G L + + + ++ + D + + + LE + +
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA-DASHCIQQI---LESIAY 143
Query: 407 GHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
HS +VH +LKP N+LL + ++DFG++ E +DS T GY++PE
Sbjct: 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPE 200
Query: 464 FGSEGNVSSKCDVYSYGILL 483
+ S D+++ G++L
Sbjct: 201 VLKKDPYSKPVDIWACGVIL 220
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 9/204 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 126
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGS 466
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 184
Query: 467 EGNVSSKCDVYSYGILLLETFTRK 490
S+ D++S G + E TR+
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 32/218 (14%)
Query: 302 GGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEV--LRNVRHRNLIKILS----- 354
G FG V+K L + VA+KIF +Q +Q S+ +E EV L ++H N+++ +
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQ---SWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH-------G 407
+ + + L+ F GSL +L ++ + + +I +A L YLH G
Sbjct: 91 TSVDVDL-WLITAFHEKGSLSDFLKANVVSWN--ELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
H + H D+K N+LL N+ A ++DFG++ G + + T YMAPE E
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV-LE 206
Query: 468 GNVSS------KCDVYSYGILLLETFTR----KKPTDE 495
G ++ + D+Y+ G++L E +R P DE
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDE 244
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK + +AF+ N E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 136
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 194 IFGAT-DYTSSIDVWSAGCVLAE 215
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 25/213 (11%)
Query: 295 ECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKI 352
EC +G G +G V++G L G +VA+KIF+ + EQ S+ E E+ V RH N++
Sbjct: 14 EC--VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQ---SWFRETEIYNTVLLRHDNILGF 67
Query: 353 LSSCCNTNFKA----LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA---LEYLH 405
++S + + L+ + +GSL +L + RL + LA +E
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD--SVIQTMTIATIGYMAPE 463
+ H D K N+L+ N+ ++D G++ + +G D + + T YMAPE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 464 FGSEGNVSSKC-------DVYSYGILLLETFTR 489
E + + C D++++G++L E R
Sbjct: 188 VLDE-QIRTDCFESYKWTDIWAFGLVLWEIARR 219
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 17/210 (8%)
Query: 288 RATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNL--QLEQAFRSFNSECEVLRNV 344
RA D + +G+G +G K SDG + K + E + SE +LR +
Sbjct: 4 RAED-YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 345 RHRNLIKILSSCCNTNFKAL--VLEFMPNGSLDKWLYSHNYFQDIPDR---LNIMIDVAL 399
+H N+++ + L V+E+ G L + + D L +M + L
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 400 ALEYLHH----GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA 455
AL+ H GH+ V+H DLKP+N+ LD + DFG++++L D+ +
Sbjct: 123 ALKECHRRSDGGHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKAFVG 178
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGILLLE 485
T YM+PE + + + K D++S G LL E
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 299 LGSGGFGSVYKGILSD------GTTVAIKIFNLQLEQAFR-SFNSECEVLRNVRHRNLIK 351
LG G FG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLNIMIDVALAL-EYLH 405
+L +V+E M +G L +L S N P L MI +A + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
+ ++ VH DL N ++ + + DFG+++ + E D + + +MAPE
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 204
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+G ++ D++S+G++L E
Sbjct: 205 KDGVFTTSSDMWSFGVVLWE 224
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA--FRSFNSECEVLRNVRH 346
+D ++ LG G F V + + + G A KI N + A F+ E + R ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ S +F LV + + G L + + + ++ + D + + + LE + +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHCIQQI---LESIAY 119
Query: 407 GHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
HS +VH +LKP N+LL + ++DFG++ E +DS T GY++PE
Sbjct: 120 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPE 176
Query: 464 FGSEGNVSSKCDVYSYGILL 483
+ S D+++ G++L
Sbjct: 177 VLKKDPYSKPVDIWACGVIL 196
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 19/203 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK 351
+ + ++G+G FG VY+ L D G VAIK + +AF+ N E +++R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFK--NRELQIMRKLDHCNIVR 77
Query: 352 ILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+ ++ K LVL+++P + Q +P + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLP-VIYVKLYMYQLFRSLA 136
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
+ HS + H D+KP N+LLD + V + DFG +K L G+ +V I + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 464 -FGSEGNVSSKCDVYSYGILLLE 485
FG+ + +S DV+S G +L E
Sbjct: 194 IFGAT-DYTSSIDVWSAGCVLAE 215
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA--FRSFNSECEVLRNVRH 346
+D ++ LG G F V + + + G A KI N + A F+ E + R ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ S +F LV + + G L + + + ++ + D + + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA-DASHCIQQI---LESIAY 120
Query: 407 GHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
HS +VH +LKP N+LL + ++DFG++ E +DS T GY++PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPE 177
Query: 464 FGSEGNVSSKCDVYSYGILL 483
+ S D+++ G++L
Sbjct: 178 VLKKDPYSKPVDIWACGVIL 197
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 13/200 (6%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA--FRSFNSECEVLRNVRH 346
+D ++ LG G F V + + + G A KI N + A F+ E + R ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ S +F LV + + G L + + + ++ + D + + + LE + +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHCIQQI---LESIAY 120
Query: 407 GHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
HS +VH +LKP N+LL + ++DFG++ E +DS T GY++PE
Sbjct: 121 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPE 177
Query: 464 FGSEGNVSSKCDVYSYGILL 483
+ S D+++ G++L
Sbjct: 178 VLKKDPYSKPVDIWACGVIL 197
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 299 LGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECEVLRNVRHR-NLI 350
LG G FG V + GI T TVA+K+ + R+ SE ++L ++ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 351 KILSSCCNTNFKALVL-EFMPNGSLDKWLYS---------------HNYFQDIPDRLNIM 394
+L +C +V+ EF G+L +L S + F + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 155 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 21/204 (10%)
Query: 290 TDGFNECNLLGSGGFGSVYKGILSD----GTTVAIKIFN-LQLEQAF--RSFNSECEVLR 342
+D + +LG G FG V IL G A+K+ + Q++Q S E ++L+
Sbjct: 31 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 87
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
+ H N++K+ + + LV E G L + S F ++ D I+ V +
Sbjct: 88 QLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGIT 146
Query: 403 YLHHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
Y+H +VH DLKP N+LL+ ++ + DFG+S + S I T Y
Sbjct: 147 YMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYY 200
Query: 460 MAPEFGSEGNVSSKCDVYSYGILL 483
+APE G KCDV+S G++L
Sbjct: 201 IAPEV-LHGTYDEKCDVWSTGVIL 223
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 123
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE G
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 181
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 182 CK-YYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLSFC 119
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + IP L I + L+ L
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLAFC 126
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE G
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 184
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 185 CK-YYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 299 LGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECEVLRNVRHR-NLI 350
LG G FG V + GI T TVA+K+ + R+ SE ++L ++ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 351 KILSSCCNTNFKALVL-EFMPNGSLDKWLYS---------------HNYFQDIPDRLNIM 394
+L +C +V+ EF G+L +L S + F + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 25/248 (10%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ-LEQAFRSFNS--------ECEVLRN 343
F +LG GG+G V++ G KIF ++ L++A N+ E +L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 344 VRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEY 403
V+H ++ ++ + L+LE++ G L L F + + ++++AL +
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME-DTACFYLAEISMALGH 136
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
LH +++ DLKP NI+L+ ++DFG+ K D + TI YMAPE
Sbjct: 137 LHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPE 191
Query: 464 FGSEGNVSSKCDVYSYGILLLETFT---------RKKPTDEMFTGEMNLKNWVKESLPHG 514
+ D +S G L+ + T RKK D++ ++NL ++ +
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
Query: 515 LPKIADAN 522
L K+ N
Sbjct: 252 LKKLLKRN 259
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 299 LGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECEVLRNVRHR-NLI 350
LG G FG V + GI T TVA+K+ + R+ SE ++L ++ H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 351 KILSSCCNTNFKALVL-EFMPNGSLDKWLYS---------------HNYFQDIPDRLNIM 394
+L +C +V+ EF G+L +L S + F + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 299 LGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECEVLRNVRHR-NLI 350
LG G FG V + GI T TVA+K+ + R+ SE ++L ++ H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 351 KILSSCCNTNFKALVL-EFMPNGSLDKWLYS---------------HNYFQDIPDRLNIM 394
+L +C +V+ EF G+L +L S + F + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 155 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 25/248 (10%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ-LEQAFRSFNS--------ECEVLRN 343
F +LG GG+G V++ G KIF ++ L++A N+ E +L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 344 VRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEY 403
V+H ++ ++ + L+LE++ G L L F + + ++++AL +
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFME-DTACFYLAEISMALGH 136
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
LH +++ DLKP NI+L+ ++DFG+ K D + TI YMAPE
Sbjct: 137 LHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPE 191
Query: 464 FGSEGNVSSKCDVYSYGILLLETFT---------RKKPTDEMFTGEMNLKNWVKESLPHG 514
+ D +S G L+ + T RKK D++ ++NL ++ +
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
Query: 515 LPKIADAN 522
L K+ N
Sbjct: 252 LKKLLKRN 259
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 290 TDGFNECNLLGSGGFGSVY--KGILSDGTTVAIKIFN-LQLEQAF--RSFNSECEVLRNV 344
+D + +LG G FG V K ++ G A+K+ + Q++Q S E ++L+ +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
H N++K+ + + LV E G L + S F ++ D I+ V + Y+
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 165
Query: 405 HHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
H +VH DLKP N+LL+ ++ + DFG+S + S I T Y+A
Sbjct: 166 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIA 219
Query: 462 PEFGSEGNVSSKCDVYSYGILL 483
PE G KCDV+S G++L
Sbjct: 220 PEV-LHGTYDEKCDVWSTGVIL 240
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 118
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEIL 176
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 177 LGCK-YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 302 GGFGSVYKGILSDGTTVAI-KIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN 360
G FG VYK + + +A K+ + + E+ + E ++L + H N++K+L + N
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPS 420
+++EF G++D + + I + L+ L++ H ++H DLK
Sbjct: 81 NLWILIEFCAGGAVDAVMLE---LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 421 NILLDENMVAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMAPEF-----GSEGNVSSK 473
NIL + ++DFG+S + + IQ I T +MAPE + K
Sbjct: 138 NILFTLDGDIKLADFGVS---AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 194
Query: 474 CDVYSYGILLLETFTRKKPTDEM 496
DV+S GI L+E + P E+
Sbjct: 195 ADVWSLGITLIEMAEIEPPHHEL 217
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 299 LGSGGFGSVYK----GILSDGT--TVAIKIFNLQLEQA-FRSFNSECEVLRNVRHR-NLI 350
LG G FG V + GI T TVA+K+ + R+ SE ++L ++ H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 351 KILSSCCNTNFKALVL-EFMPNGSLDKWLYS---------------HNYFQDIPDRLNIM 394
+L +C +V+ EF G+L +L S + F + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 192 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 290 TDGFNECNLLGSGGFGSVY--KGILSDGTTVAIKIFN-LQLEQAF--RSFNSECEVLRNV 344
+D + +LG G FG V K ++ G A+K+ + Q++Q S E ++L+ +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
H N++K+ + + LV E G L + S F ++ D I+ V + Y+
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 166
Query: 405 HHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
H +VH DLKP N+LL+ ++ + DFG+S + S I T Y+A
Sbjct: 167 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIA 220
Query: 462 PEFGSEGNVSSKCDVYSYGILL 483
PE G KCDV+S G++L
Sbjct: 221 PEV-LHGTYDEKCDVWSTGVIL 241
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNL--QLEQAFRS----FNSEC 338
DL + + ++G G FG V ++ +T + L + E RS F E
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 120
Query: 339 EVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLN--IMID 396
+++ ++++ + + + +V+E+MP G L + NY D+P++ +
Sbjct: 121 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY--DVPEKWARFYTAE 176
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSVIQTMTIA 455
V LAL+ +H S +H D+KP N+LLD++ ++DFG K+ EG V +
Sbjct: 177 VVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVG 231
Query: 456 TIGYMAPEF----GSEGNVSSKCDVYSYGILLLETFTRKKP 492
T Y++PE G +G +CD +S G+ L E P
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNL--QLEQAFRS----FNSEC 338
DL + + ++G G FG V ++ +T + L + E RS F E
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 339 EVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLN--IMID 396
+++ ++++ + + + +V+E+MP G L + NY D+P++ +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY--DVPEKWARFYTAE 181
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSVIQTMTIA 455
V LAL+ +H S +H D+KP N+LLD++ ++DFG K+ EG V +
Sbjct: 182 VVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVG 236
Query: 456 TIGYMAPEF----GSEGNVSSKCDVYSYGILLLETFTRKKP 492
T Y++PE G +G +CD +S G+ L E P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F +G+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E+MP G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEF 464
S +++ DLKP N+L+D+ V+DFG +K + +T + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAPEI 209
Query: 465 GSEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 210 ILSKGYNKAVDWWALGVLIYE 230
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F +G+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E+MP G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEF 464
S +++ DLKP N+L+D+ V+DFG +K + +T + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG------RTWXLCGTPEYLAPEI 209
Query: 465 GSEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 210 ILSKGYNKAVDWWALGVLIYE 230
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 24/221 (10%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNL--QLEQAFRS----FNSEC 338
DL + + ++G G FG V ++ +T + L + E RS F E
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEV--QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEER 125
Query: 339 EVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLN--IMID 396
+++ ++++ + + + +V+E+MP G L + NY D+P++ +
Sbjct: 126 DIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY--DVPEKWARFYTAE 181
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSVIQTMTIA 455
V LAL+ +H S +H D+KP N+LLD++ ++DFG K+ EG V +
Sbjct: 182 VVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVRCDTAVG 236
Query: 456 TIGYMAPEF----GSEGNVSSKCDVYSYGILLLETFTRKKP 492
T Y++PE G +G +CD +S G+ L E P
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 211
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIF------NLQLEQAFRSFNSECEV 340
++ + + L+G G +G V K D G VAIK F + + A R E ++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR----EIKL 77
Query: 341 LRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA 400
L+ +RH NL+ +L C LV EF+ + LD + P+ L+ +
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDD-------LELFPNGLDYQVVQKYL 130
Query: 401 LEYLH---HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATI 457
+ ++ HS ++H D+KP NIL+ ++ V + DFG ++ L + + +AT
Sbjct: 131 FQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATR 188
Query: 458 GYMAPE-FGSEGNVSSKCDVYSYGILLLETF 487
Y APE + DV++ G L+ E F
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 17/202 (8%)
Query: 290 TDGFNECNLLGSGGFGSVY--KGILSDGTTVAIKIFN-LQLEQAF--RSFNSECEVLRNV 344
+D + +LG G FG V K ++ G A+K+ + Q++Q S E ++L+ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
H N++K+ + + LV E G L + S F ++ D I+ V + Y+
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 142
Query: 405 HHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
H +VH DLKP N+LL+ ++ + DFG+S + S I T Y+A
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIGTAYYIA 196
Query: 462 PEFGSEGNVSSKCDVYSYGILL 483
PE G KCDV+S G++L
Sbjct: 197 PEV-LHGTYDEKCDVWSTGVIL 217
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE-PHARFYAAQIVLTFEYLH 159
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 211
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 88/204 (43%), Gaps = 13/204 (6%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILS 354
LG G FG V VA+K + QL E L+ +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+V+E+ D + +D R + A+EY H +VH
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRF--FQQIICAIEYCHRHK---IVH 131
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGSEGNVSSK 473
DLKP N+LLD+N+ ++DFG+S ++ +G+ + + Y APE + +
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVINGKLYAGPE 188
Query: 474 CDVYSYGILLLETFTRKKPTDEMF 497
DV+S GI+L + P D+ F
Sbjct: 189 VDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 278 WRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNS 336
W+ L++ + F+ ++G GGFG VY +D G A+K + + R
Sbjct: 177 WKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMK 230
Query: 337 ECEVLRNVRHRNLIKILSS-------CCNTNFK-----ALVLEFMPNGSLDKWLYSHNYF 384
+ E L + R ++ ++S+ C + F + +L+ M G L L H F
Sbjct: 231 QGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 289
Query: 385 QDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444
+ R ++ L LE H H+ VV+ DLKP+NILLDE+ +SD G++ +
Sbjct: 290 SEADMRF-YAAEIILGLE---HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Query: 445 DDSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKP 492
++ T GYMAPE +G S D +S G +L + P
Sbjct: 346 KPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 278 WRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNS 336
W+ L++ + F+ ++G GGFG VY +D G A+K + + R
Sbjct: 177 WKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMK 230
Query: 337 ECEVLRNVRHRNLIKILSS-------CCNTNFK-----ALVLEFMPNGSLDKWLYSHNYF 384
+ E L + R ++ ++S+ C + F + +L+ M G L L H F
Sbjct: 231 QGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 289
Query: 385 QDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444
+ R ++ L LE H H+ VV+ DLKP+NILLDE+ +SD G++ +
Sbjct: 290 SEADMRF-YAAEIILGLE---HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Query: 445 DDSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKP 492
++ T GYMAPE +G S D +S G +L + P
Sbjct: 346 KPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 278 WRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNS 336
W+ L++ + F+ ++G GGFG VY +D G A+K + + R
Sbjct: 177 WKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMK 230
Query: 337 ECEVLRNVRHRNLIKILSS-------CCNTNFK-----ALVLEFMPNGSLDKWLYSHNYF 384
+ E L + R ++ ++S+ C + F + +L+ M G L L H F
Sbjct: 231 QGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 289
Query: 385 QDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444
+ R ++ L LE H H+ VV+ DLKP+NILLDE+ +SD G++ +
Sbjct: 290 SEADMRF-YAAEIILGLE---HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345
Query: 445 DDSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKP 492
++ T GYMAPE +G S D +S G +L + P
Sbjct: 346 KPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLD-KWLYSHNYFQDIPDRLNIMIDVALALEYL 404
H N++K+L N LV EF+ S+D K + IP L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPL-IKSYLFQLLQGL 119
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 120 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEI 177
Query: 464 -FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 178 LLGCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA--FRSFNSECEVLRNVRH 346
TD + +G G F V + + L G A KI N + A + E + R ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ S F LV + + G L + + + Y+ + D + + + LE + H
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-ADASHCIQQI---LEAVLH 118
Query: 407 GHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
H VVH DLKP N+LL + ++DFG++ + +GD T GY++PE
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFA-GTPGYLSPE 176
Query: 464 FGSEGNVSSKCDVYSYGILL 483
+ D+++ G++L
Sbjct: 177 VLRKEAYGKPVDIWACGVIL 196
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 299 LGSGGFGSV-YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+G G G V + S G VA+K +L+ +Q +E ++R+ +H N++++ +S
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA-LEYLHHGHSTPVVHCD 416
+ +V+EF+ G+L + +H + + V LA L+ L H+ V+H D
Sbjct: 97 VGDELWVVMEFLEGGALTD-IVTHTRMNE-----EQIAAVCLAVLQALSVLHAQGVIHRD 150
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
+K +ILL + +SDFG + + + + + T +MAPE S + D+
Sbjct: 151 IKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPEVDI 208
Query: 477 YSYGILLLETFTRKKP 492
+S GI+++E + P
Sbjct: 209 WSLGIMVIEMVDGEPP 224
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 25/202 (12%)
Query: 299 LGSGGFGSVYKGILSDG-TTVAIKIF-------------NLQLEQAFRSFNSECEVLRNV 344
LGSG +G V +G + AIK+ N +E+ +E +L+++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
H N+IK+ + + LV EF G L + + + + F D D NIM + + YL
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANIMKQILSGICYL 162
Query: 405 HHGHSTPVVHCDLKPSNILLDEN---MVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
H + +VH D+KP NILL+ + + DFG+S + D ++ + T Y+A
Sbjct: 163 HKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK--DYKLRD-RLGTAYYIA 216
Query: 462 PEFGSEGNVSSKCDVYSYGILL 483
PE + + KCDV+S G+++
Sbjct: 217 PEVLKK-KYNEKCDVWSCGVIM 237
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 29/229 (12%)
Query: 278 WRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNS 336
W+ L++ + F+ ++G GGFG VY +D G A+K + + R
Sbjct: 176 WKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK-----RIKMK 229
Query: 337 ECEVLRNVRHRNLIKILSS-------CCNTNFK-----ALVLEFMPNGSLDKWLYSHNYF 384
+ E L + R ++ ++S+ C + F + +L+ M G L L H F
Sbjct: 230 QGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVF 288
Query: 385 QDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444
+ R ++ L LE H H+ VV+ DLKP+NILLDE+ +SD G++ +
Sbjct: 289 SEADMRF-YAAEIILGLE---HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 344
Query: 445 DDSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKP 492
++ T GYMAPE +G S D +S G +L + P
Sbjct: 345 KPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 299 LGSGGFGSV-YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+G G G V + S G VA+K +L+ +Q +E ++R+ +H N++++ +S
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA-LEYLHHGHSTPVVHCD 416
+ +V+EF+ G+L + +H + + V LA L+ L H+ V+H D
Sbjct: 99 VGDELWVVMEFLEGGALTD-IVTHTRMNE-----EQIAAVCLAVLQALSVLHAQGVIHRD 152
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
+K +ILL + +SDFG + + + + + T +MAPE S + D+
Sbjct: 153 IKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPEVDI 210
Query: 477 YSYGILLLETFTRKKP 492
+S GI+++E + P
Sbjct: 211 WSLGIMVIEMVDGEPP 226
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 26/244 (10%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDG-TTVAIKIFNLQ------LEQAFRSFN--SECEVL 341
D + LGSG G V VAIKI + + +A + N +E E+L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 342 RNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL 401
+ + H +IKI + ++ +VLE M G L + + ++ +L + LA+
Sbjct: 76 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV 133
Query: 402 EYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG 458
+YLH ++H DLKP N+LL +E+ + ++DFG SK+LGE S+++T+ T
Sbjct: 134 QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC-GTPT 187
Query: 459 YMAPE----FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG 514
Y+APE G+ G + D +S G++L + P E T +++LK+ + +
Sbjct: 188 YLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNF 245
Query: 515 LPKI 518
+P++
Sbjct: 246 IPEV 249
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 117
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 175
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 176 LGCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 299 LGSGGFGSV-YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+G G G V + S G VA+K +L+ +Q +E ++R+ +H N++++ +S
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA-LEYLHHGHSTPVVHCD 416
+ +V+EF+ G+L + +H + + V LA L+ L H+ V+H D
Sbjct: 219 VGDELWVVMEFLEGGALTD-IVTHTRMNE-----EQIAAVCLAVLQALSVLHAQGVIHRD 272
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
+K +ILL + +SDFG + + + + + T +MAPE S + D+
Sbjct: 273 IKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPEVDI 330
Query: 477 YSYGILLLETFTRKKP 492
+S GI+++E + P
Sbjct: 331 WSLGIMVIEMVDGEPP 346
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 26/244 (10%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDG-TTVAIKIFNLQ------LEQAFRSFN--SECEVL 341
D + LGSG G V VAIKI + + +A + N +E E+L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 342 RNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL 401
+ + H +IKI + ++ +VLE M G L + + ++ +L + LA+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV 127
Query: 402 EYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG 458
+YLH ++H DLKP N+LL +E+ + ++DFG SK+LGE S+++T+ T
Sbjct: 128 QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC-GTPT 181
Query: 459 YMAPE----FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG 514
Y+APE G+ G + D +S G++L + P E T +++LK+ + +
Sbjct: 182 YLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNF 239
Query: 515 LPKI 518
+P++
Sbjct: 240 IPEV 243
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 121
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 179
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 180 LGCK-YYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 299 LGSGGFGSV--YKGILSDGTTVAIKIFNL------QLEQAFRSFNSECEVLRNVRHRNLI 350
+G G F V + IL+ G VA+KI + L++ FR E +++ + H N++
Sbjct: 15 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIV 69
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ LV+E+ G + +L +H + ++ R + A++Y H
Sbjct: 70 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF-- 126
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGSEGN 469
+VH DLK N+LLD +M ++DFG S G+ + T + Y APE F +
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFC-GSPPYAAPELFQGKKY 182
Query: 470 VSSKCDVYSYGILLLETFTRKKPTD 494
+ DV+S G++L + P D
Sbjct: 183 DGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 315 GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSL 374
G VA+K +L+ +Q +E ++R+ H N++ + SS + +V+EF+ G+L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 375 DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSD 434
+ +H + + + V AL YL H+ V+H D+K +ILL + +SD
Sbjct: 130 TD-IVTHTRMNE-EQIATVCLSVLRALSYL---HNQGVIHRDIKSDSILLTSDGRIKLSD 184
Query: 435 FGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTD 494
FG + + + + + T +MAPE S ++ D++S GI+++E + P
Sbjct: 185 FGFCAQVSK--EVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP-- 240
Query: 495 EMFTGEMNLK--NWVKESLPHGLPKIAD 520
+ E L+ +++SLP P++ D
Sbjct: 241 --YFNEPPLQAMRRIRDSLP---PRVKD 263
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 26/244 (10%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDG-TTVAIKIFNLQ------LEQAFRSFN--SECEVL 341
D + LGSG G V VAIKI + + +A + N +E E+L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 342 RNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL 401
+ + H +IKI + ++ +VLE M G L + + ++ +L + LA+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV 127
Query: 402 EYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG 458
+YLH ++H DLKP N+LL +E+ + ++DFG SK+LGE S+++T+ T
Sbjct: 128 QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC-GTPT 181
Query: 459 YMAPE----FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG 514
Y+APE G+ G + D +S G++L + P E T +++LK+ + +
Sbjct: 182 YLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNF 239
Query: 515 LPKI 518
+P++
Sbjct: 240 IPEV 243
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
Query: 364 LVLEFMPNGSLDKWLYSH--NYFQDIPDRL--NIMIDVALALEYLHHGHSTPVVHCDLKP 419
+ +E M + SLDK+ Y + Q IP+ + I + + ALE+LH S V+H D+KP
Sbjct: 127 ICMELM-DTSLDKF-YKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKP 182
Query: 420 SNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGSEGN---VSSKCD 475
SN+L++ + DFGIS L DSV +T+ YMAPE E N S K D
Sbjct: 183 SNVLINALGQVKMCDFGISGYLV---DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSD 239
Query: 476 VYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
++S GI ++E + P D T LK V+E P
Sbjct: 240 IWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ 277
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLD-KWLYSHNYFQDIPDRLNIMIDVALALEYL 404
H N++K+L N LV EF+ S+D K + IP L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPL-IKSYLFQLLQGL 117
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEI 175
Query: 464 -FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 176 LLGCK-YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 117
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 175
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 176 LGCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 119
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 177
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 178 LGCK-YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 299 LGSGGFGSV-YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+G G G V + S G VA+K +L+ +Q +E ++R+ +H N++++ +S
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA-LEYLHHGHSTPVVHCD 416
+ +V+EF+ G+L + +H + + V LA L+ L H+ V+H D
Sbjct: 88 VGDELWVVMEFLEGGALTD-IVTHTRMNE-----EQIAAVCLAVLQALSVLHAQGVIHRD 141
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
+K +ILL + +SDFG + + + + + T +MAPE S + D+
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPEVDI 199
Query: 477 YSYGILLLETFTRKKP 492
+S GI+++E + P
Sbjct: 200 WSLGIMVIEMVDGEPP 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 299 LGSGGFGSV-YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+G G G V + S G VA+K +L+ +Q +E ++R+ +H N++++ +S
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA-LEYLHHGHSTPVVHCD 416
+ +V+EF+ G+L + +H + + V LA L+ L H+ V+H D
Sbjct: 142 VGDELWVVMEFLEGGALTD-IVTHTRMNE-----EQIAAVCLAVLQALSVLHAQGVIHRD 195
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
+K +ILL + +SDFG + + + + + T +MAPE S + D+
Sbjct: 196 IKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPEVDI 253
Query: 477 YSYGILLLETFTRKKP 492
+S GI+++E + P
Sbjct: 254 WSLGIMVIEMVDGEPP 269
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 26/244 (10%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDG-TTVAIKIFNLQ------LEQAFRSFN--SECEVL 341
D + LGSG G V VAIKI + + +A + N +E E+L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 342 RNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL 401
+ + H +IKI + ++ +VLE M G L + + ++ +L + LA+
Sbjct: 69 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV 126
Query: 402 EYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG 458
+YLH ++H DLKP N+LL +E+ + ++DFG SK+LGE S+++T+ T
Sbjct: 127 QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC-GTPT 180
Query: 459 YMAPE----FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG 514
Y+APE G+ G + D +S G++L + P E T +++LK+ + +
Sbjct: 181 YLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNF 238
Query: 515 LPKI 518
+P++
Sbjct: 239 IPEV 242
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 117
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 175
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 176 LGCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 21/215 (9%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDGTTV-AIKIFNLQLEQAFRS----FNSECEVLRNVR 345
+ F ++G G FG V L + V A+KI N + E R+ F E +VL N
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN-KWEMLKRAETACFREERDVLVNGD 132
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQD-IPDRLN--IMIDVALALE 402
+ + + + + N LV+++ G L L + F+D +P+ + + ++ +A++
Sbjct: 133 SKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL---SKFEDRLPEEMARFYLAEMVIAID 189
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
+H H VH D+KP NIL+D N ++DFG L E D +V ++ + T Y++P
Sbjct: 190 SVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLME-DGTVQSSVAVGTPDYISP 245
Query: 463 EF-----GSEGNVSSKCDVYSYGILLLETFTRKKP 492
E G +G +CD +S G+ + E + P
Sbjct: 246 EILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 120
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 178
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 179 LGCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 119
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 177
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 178 LGCK-YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 26/244 (10%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDG-TTVAIKIFNLQ------LEQAFRSFN--SECEVL 341
D + LGSG G V VAIKI + + +A + N +E E+L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 342 RNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL 401
+ + H +IKI + ++ +VLE M G L + + ++ +L + LA+
Sbjct: 70 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAV 127
Query: 402 EYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG 458
+YLH ++H DLKP N+LL +E+ + ++DFG SK+LGE S+++T+ T
Sbjct: 128 QYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC-GTPT 181
Query: 459 YMAPE----FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG 514
Y+APE G+ G + D +S G++L + P E T +++LK+ + +
Sbjct: 182 YLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNF 239
Query: 515 LPKI 518
+P++
Sbjct: 240 IPEV 243
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + IP L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLA 119
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 120 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 177
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 178 LGCK-YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILLG 176
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 299 LGSGGFGSV-YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
+G G G V + S G VA+K +L+ +Q +E ++R+ +H N++++ +S
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA-LEYLHHGHSTPVVHCD 416
+ +V+EF+ G+L + +H + + V LA L+ L H+ V+H D
Sbjct: 92 VGDELWVVMEFLEGGALTD-IVTHTRMNE-----EQIAAVCLAVLQALSVLHAQGVIHRD 145
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
+K +ILL + +SDFG + + + + + T +MAPE S + D+
Sbjct: 146 IKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRLPYGPEVDI 203
Query: 477 YSYGILLLETFTRKKP 492
+S GI+++E + P
Sbjct: 204 WSLGIMVIEMVDGEPP 219
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA--FRSFNSECEVLRNVRH 346
TD + LG G F V + + + G A KI N + A + E + R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ S F LV + + G L + + + Y+ + D + + + LE ++H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-ADASHCIQQI---LESVNH 118
Query: 407 GHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
H +VH DLKP N+LL + ++DFG++ + +GD T GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFA-GTPGYLSPE 176
Query: 464 FGSEGNVSSKCDVYSYGILL 483
+ D+++ G++L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 120
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 178
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 179 LGCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA--FRSFNSECEVLRNVRH 346
TD + LG G F V + + + G A KI N + A + E + R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ S F LV + + G L + + + Y+ + D + + + LE ++H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA-DASHCIQQI---LESVNH 118
Query: 407 GHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
H +VH DLKP N+LL + ++DFG++ + +GD T GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFA-GTPGYLSPE 176
Query: 464 FGSEGNVSSKCDVYSYGILL 483
+ D+++ G++L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 118
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 176
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 177 LGCK-YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 118
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 119 FCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 176
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 177 LGCK-YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEF 464
S +++ DLKP N+L+D+ V+DFG +K + +T + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEI 209
Query: 465 GSEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 210 ILSKGYNKAVDWWALGVLIYE 230
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILLG 176
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 20/218 (9%)
Query: 286 LERATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKIFNLQLEQAFRS----FNSECEV 340
L+ + ++ ++G G FG V V A+K+ + + E RS F E ++
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLS-KFEMIKRSDSAFFWEERDI 128
Query: 341 LRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLN--IMIDVA 398
+ ++++ + + + +V+E+MP G L + NY D+P++ +V
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNY--DVPEKWAKFYTAEVV 184
Query: 399 LALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG 458
LAL+ +H S ++H D+KP N+LLD++ ++DFG + E V + T
Sbjct: 185 LALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET-GMVHCDTAVGTPD 240
Query: 459 YMAPEF----GSEGNVSSKCDVYSYGILLLETFTRKKP 492
Y++PE G +G +CD +S G+ L E P
Sbjct: 241 YISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEF 464
S +++ DLKP N+L+D+ V+DFG +K + +T + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLAPEI 209
Query: 465 GSEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 210 ILSKGYNKAVDWWALGVLIYE 230
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 299 LGSGGFGSVYKGILSD------GTTVAIKIFNLQLEQAFR-SFNSECEVLRNVRHRNLIK 351
LG G FG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLNIMIDVALAL-EYLH 405
+L +V+E M +G L +L S N P L MI +A + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
+ ++ VH +L N ++ + + DFG+++ + E D + + +MAPE
Sbjct: 145 YLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 204
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+G ++ D++S+G++L E
Sbjct: 205 KDGVFTTSSDMWSFGVVLWE 224
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ + L K++ + IP L I + L+ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFM-DASALTGIPLPL-IKSYLFQLLQGLA 117
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 175
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 176 LGCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 120
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE G
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILLG 178
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 179 CK-YYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 16/213 (7%)
Query: 291 DGFNECNLLGSGGFGSVY--KGILSD--GTTVAIKIFN----LQLEQAFRSFNSECEVLR 342
+ F +LG+G +G V+ + I G A+K+ +Q + +E +VL
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 343 NVRHRNLIKILSSCCNTNFK-ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL 401
++R + L T K L+L+++ G L L F + ++ + ++ LAL
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG-EIVLAL 172
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
E+LH +++ D+K NILLD N ++DFG+SK D++ TI YMA
Sbjct: 173 EHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-VADETERAYDFCGTIEYMA 228
Query: 462 PEF--GSEGNVSSKCDVYSYGILLLETFTRKKP 492
P+ G + D +S G+L+ E T P
Sbjct: 229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E+ P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+++D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 299 LGSGGFGSVYKGILSD------GTTVAIKIFNLQLEQAFR-SFNSECEVLRNVRHRNLIK 351
LG G FG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLNIMIDVALAL-EYLH 405
+L +V+E M +G L +L S N P L MI +A + + +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
+ ++ VH +L N ++ + + DFG+++ + E D + + +MAPE
Sbjct: 146 YLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESL 205
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+G ++ D++S+G++L E
Sbjct: 206 KDGVFTTSSDMWSFGVVLWE 225
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLD-KWLYSHNYFQDIPDRLNIMIDVALALEYL 404
H N++K+L N LV EF+ S+D K + IP L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPL-IKSYLFQLLQGL 119
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEI 177
Query: 464 -FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 178 LLGCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F +G+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 92
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 151
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 152 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 203
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 204 LSKGYNKAVDWWALGVLIYE 223
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 120
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 179
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 180 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 231
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 232 LSKGYNKAVDWWALGVLIYE 251
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 211
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 13/208 (6%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLD-KWLYSHNYFQDIPDRLNIMIDVALALEYL 404
H N++K+L N LV EF+ S+D K + IP L I + L+ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPL-IKSYLFQLLQGL 118
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEI 176
Query: 464 -FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 177 LLGCK-YYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 211
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 211
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 92
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++P G + L F + P + L EYLH
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXE-PHARFYAAQIVLTFEYLH 151
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 152 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 203
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 204 LSKGYNKAVDWWALGVLIYE 223
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRN 348
D + ++GSG V + VAIK NL+ + + E + + H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 349 LIKILSSCCNTNFKALVLEFMPNGS----LDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
++ +S + LV++ + GS + + + + D I + LE L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD---SVIQTMTIATIGYMA 461
+ H +H D+K NILL E+ ++DFG+S L G D + ++ + T +MA
Sbjct: 130 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 462 PEFGSE-GNVSSKCDVYSYGILLLETFTRKKP 492
PE + K D++S+GI +E T P
Sbjct: 190 PEVMEQVRGYDFKADIWSFGITAIELATGAAP 221
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 91/212 (42%), Gaps = 10/212 (4%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRN 348
D + ++GSG V + VAIK NL+ + + E + + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 349 LIKILSSCCNTNFKALVLEFMPNGS----LDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
++ +S + LV++ + GS + + + + D I + LE L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD---SVIQTMTIATIGYMA 461
+ H +H D+K NILL E+ ++DFG+S L G D + ++ + T +MA
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 462 PEFGSE-GNVSSKCDVYSYGILLLETFTRKKP 492
PE + K D++S+GI +E T P
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELATGAAP 226
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E+ P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+++D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 21/223 (9%)
Query: 281 TSYLDLERATDGFNECNLLGSGGFGSV--YKGILSDGTTVAIKIFN------LQLEQAFR 332
TS D + + +G G F V + +L+ G VA+KI + L++ FR
Sbjct: 5 TSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFR 63
Query: 333 SFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLN 392
E +++ + H N++K+ LV+E+ G + +L +H ++ R
Sbjct: 64 ----EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 119
Query: 393 IMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTM 452
+ A++Y H + +VH DLK N+LLD +M ++DFG S G+ + T
Sbjct: 120 FR-QIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK--LDTF 173
Query: 453 TIATIGYMAPE-FGSEGNVSSKCDVYSYGILLLETFTRKKPTD 494
+ Y APE F + + DV+S G++L + P D
Sbjct: 174 C-GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+ L + E + E +L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 119
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE G
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 177
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 178 CK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+ L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV EF+ + L K++ + + IP L I + L+ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 290 TDGFNECNLLGSGGFGSVYKGILSDGTTV--AIKIFNLQLEQAFRSFNSECEVL-RNVRH 346
TDG+ +G G + SV K + T A+KI ++++ R E E+L R +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKI----IDKSKRDPTEEIEILLRYGQH 75
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N+I + + + +V E G L + +F + + ++ + +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSE-REASAVLFTITKTVEYLH- 133
Query: 407 GHSTPVVHCDLKPSNIL-LDEN---MVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
+ VVH DLKPSNIL +DE+ + DFG +K L ++ ++ T T ++AP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLXT-PCYTANFVAP 189
Query: 463 EFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
E + CD++S G+LL T P
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 26/247 (10%)
Query: 288 RATDGFNECNLLGSGGFGSVYKG--ILSDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRN 343
RA + +G G +G V+K + + G VA+K +Q + ++ E VLR+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 344 VR---HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-------LNI 393
+ H N++++ C + + +D+ L + Y +P+ ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT--YLDKVPEPGVPTETIKDM 125
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
M + L++LH S VVH DLKP NIL+ + ++DFG++++ + T
Sbjct: 126 MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSV 179
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ T+ Y APE + + ++ D++S G + E F R+KP +F G ++ K
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVI 235
Query: 514 GLPKIAD 520
GLP D
Sbjct: 236 GLPGEED 242
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E+ P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+++D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 26/247 (10%)
Query: 288 RATDGFNECNLLGSGGFGSVYKG--ILSDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRN 343
RA + +G G +G V+K + + G VA+K +Q + ++ E VLR+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 344 VR---HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-------LNI 393
+ H N++++ C + + +D+ L + Y +P+ ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT--YLDKVPEPGVPTETIKDM 125
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
M + L++LH S VVH DLKP NIL+ + ++DFG++++ + T
Sbjct: 126 MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSV 179
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ T+ Y APE + + ++ D++S G + E F R+KP +F G ++ K
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVI 235
Query: 514 GLPKIAD 520
GLP D
Sbjct: 236 GLPGEED 242
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 26/247 (10%)
Query: 288 RATDGFNECNLLGSGGFGSVYKG--ILSDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRN 343
RA + +G G +G V+K + + G VA+K +Q + ++ E VLR+
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 344 VR---HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR-------LNI 393
+ H N++++ C + + +D+ L + Y +P+ ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT--YLDKVPEPGVPTETIKDM 125
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
M + L++LH S VVH DLKP NIL+ + ++DFG++++ + T
Sbjct: 126 MFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSV 179
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
+ T+ Y APE + + ++ D++S G + E F R+KP +F G ++ K
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKP---LFRGSSDVDQLGKILDVI 235
Query: 514 GLPKIAD 520
GLP D
Sbjct: 236 GLPGEED 242
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-IDVALALEYL 404
H N++K+L N LV EF+ H +D D + I + L YL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-----------HQDLKDFMDASALTGIPLPLIKSYL 109
Query: 405 HH-------GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATI 457
HS V+H DLKP N+L++ ++DFG+++ G + + T+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTL 167
Query: 458 GYMAPE--FGSEGNVSSKCDVYSYGILLLETFTRK 490
Y APE G + S+ D++S G + E TR+
Sbjct: 168 WYRAPEILLGCK-YYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 17/200 (8%)
Query: 299 LGSGGFGSVYKGIL----SDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRNVRHRNLIKI 352
+G G FG K IL DG IK N+ + S E VL N++H N+++
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQY 88
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHN--YFQDIPDRLNIMIDVALALEYLHHGHST 410
S +V+++ G L K + + FQ+ L+ + + LAL+ H H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE-DQILDWFVQICLALK---HVHDR 144
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNV 470
++H D+K NI L ++ + DFGI+++L + + I T Y++PE
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICENKPY 202
Query: 471 SSKCDVYSYGILLLETFTRK 490
++K D+++ G +L E T K
Sbjct: 203 NNKSDIWALGCVLYELCTLK 222
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 299 LGSGGFGSVYKGILSD------GTTVAIKIFNLQLEQAFR-SFNSECEVLRNVRHRNLIK 351
LG G FG VY+G D T VA+K N R F +E V++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLNIMIDVALAL-EYLH 405
+L +V+E M +G L +L S N P L MI +A + + +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
+ ++ VH DL N ++ + + DFG+++ + E + + +MAPE
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESL 204
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+G ++ D++S+G++L E
Sbjct: 205 KDGVFTTSSDMWSFGVVLWE 224
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 290 TDGFNECNLLGSGGFGSVY--KGILSDGTTVAIKIFN-LQLEQAF--RSFNSECEVLRNV 344
+D + +LG G FG V K ++ G A+K+ + Q++Q S E ++L+ +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
H N+ K+ + + LV E G L + S F ++ D I+ V + Y
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYX 142
Query: 405 HHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
H +VH DLKP N+LL+ ++ + DFG+S + S I T Y+A
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIGTAYYIA 196
Query: 462 PEFGSEGNVSSKCDVYSYGILL 483
PE G KCDV+S G++L
Sbjct: 197 PEV-LHGTYDEKCDVWSTGVIL 217
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 29/224 (12%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNL-QLEQAFRSFNSECEVLRNVR 345
R F LG GGFG V++ D AIK L E A E + L +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 346 HRNLIKILSSCCNTN------------FKALVLEFMPNGSLDKWLYSHNYFQDIPDR--L 391
H +++ ++ N + + ++ +L W+ ++ L
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 392 NIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL--GEGDDSVI 449
+I + +A A+E+LH S ++H DLKPSNI + V V DFG+ + E + +V+
Sbjct: 122 HIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 450 QTM--------TIATIGYMAPEFGSEGNVSSKCDVYSYGILLLE 485
M + T YM+PE + S K D++S G++L E
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 26/236 (11%)
Query: 299 LGSGGFGSVYKGILSDG-TTVAIKIFNLQ------LEQAFRSFN--SECEVLRNVRHRNL 349
LGSG G V VAI+I + + +A + N +E E+L+ + H +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 350 IKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHS 409
IKI + ++ +VLE M G L + + ++ +L + LA++YLH
Sbjct: 203 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLHENG- 259
Query: 410 TPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 463
++H DLKP N+LL +E+ + ++DFG SK+LGE S+++T+ T Y+APE
Sbjct: 260 --IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC-GTPTYLAPEVLV 314
Query: 464 -FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518
G+ G + D +S G++L + P E T +++LK+ + + +P++
Sbjct: 315 SVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEV 368
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 118/236 (50%), Gaps = 26/236 (11%)
Query: 299 LGSGGFGSVYKGILSDG-TTVAIKIFNLQ------LEQAFRSFN--SECEVLRNVRHRNL 349
LGSG G V VAI+I + + +A + N +E E+L+ + H +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 350 IKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHS 409
IKI + ++ +VLE M G L + + ++ +L + LA++YLH
Sbjct: 217 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQMLLAVQYLHENG- 273
Query: 410 TPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 463
++H DLKP N+LL +E+ + ++DFG SK+LGE S+++T+ T Y+APE
Sbjct: 274 --IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLC-GTPTYLAPEVLV 328
Query: 464 -FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518
G+ G + D +S G++L + P E T +++LK+ + + +P++
Sbjct: 329 SVGTAG-YNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNFIPEV 382
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 12/206 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSDGT-TVAIKI-FNLQLEQ--AFRSFNSECEVLRNVRH 346
D F LG G FG+VY VA+K+ F Q+E+ E E+ ++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH 406
N++++ + + L+LE+ P G L K L F D IM ++A AL Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTF-DEQRTATIMEELADALMYCH- 140
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466
V+H D+KP N+LL ++DFG S S+ + T+ Y+ PE
Sbjct: 141 --GKKVIHRDIKPENLLLGLKGELKIADFGWSV----HAPSLRRKTMCGTLDYLPPEMIE 194
Query: 467 EGNVSSKCDVYSYGILLLETFTRKKP 492
+ K D++ G+L E P
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 299 LGSGGFGSV--YKGILSDGTTVAIKIFNL------QLEQAFRSFNSECEVLRNVRHRNLI 350
+G G F V + IL+ G VA+KI + L++ FR E +++ + H N++
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIV 76
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ LV+E+ G + +L +H ++ R + A++Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF-- 133
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGSEGN 469
+VH DLK N+LLD +M ++DFG S G+ + T + Y APE F +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFC-GSPPYAAPELFQGKKY 189
Query: 470 VSSKCDVYSYGILLLETFTRKKPTD 494
+ DV+S G++L + P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 299 LGSGGFGSV--YKGILSDGTTVAIKIFNL------QLEQAFRSFNSECEVLRNVRHRNLI 350
+G G F V + IL+ G VA+KI + L++ FR E +++ + H N++
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIV 76
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ LV+E+ G + +L +H ++ R + A++Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF-- 133
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGSEGN 469
+VH DLK N+LLD +M ++DFG S G+ + T + Y APE F +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFC-GSPPYAAPELFQGKKY 189
Query: 470 VSSKCDVYSYGILLLETFTRKKPTD 494
+ DV+S G++L + P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L++ + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E+ P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+++D+ V+DFG++K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 117
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 176
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMA 461
YLH S +++ DLKP N+L+D+ V+DFG +K + T T+ T Y+A
Sbjct: 177 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA------TWTLCGTPEYLA 227
Query: 462 PEFGSEGNVSSKCDVYSYGILLLE 485
PE + D ++ G+L+ E
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYE 251
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA-TIGYMA 461
YLH S +++ DLKP N+L+D+ V+DFG +K + +T +A T Y+A
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAGTPEYLA 206
Query: 462 PEFGSEGNVSSKCDVYSYGILLLE 485
PE + D ++ G+L+ E
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 20/222 (9%)
Query: 305 GSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCN--TN 360
G ++KG G + +K+ ++ + R FN EC LR H N++ +L +C +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 361 FKALVLEFMPNGSLDKWLYS-HNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKP 419
L+ +MP GSL L+ N+ D + +D+A + +LH H L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNS 141
Query: 420 SNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF---GSEGNVSSKCDV 476
++++DE+M A +S + + S + ++APE E D+
Sbjct: 142 RSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADM 194
Query: 477 YSYGILLLETFTRKKPTDEMFTGEMNLK---NWVKESLPHGL 515
+S+ +LL E TR+ P ++ E+ +K ++ ++P G+
Sbjct: 195 WSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGI 236
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKILSSC 356
+G G FG V++G G VA+KIF+ + E RS+ E E+ + V RH N++ +++
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 357 CNTNFKA----LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH----GH 408
N LV ++ +GSL +L + Y + + + + A L +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 124
Query: 409 STPVV-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMA 461
P + H DLK NIL+ +N ++D G L DS T+ IA T YMA
Sbjct: 125 GKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 462 PEFGSEG-NVS-----SKCDVYSYGILLLETFTR 489
PE + N+ + D+Y+ G++ E R
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKILSSC 356
+G G FG V++G G VA+KIF+ + E RS+ E E+ + V RH N++ +++
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 357 CNTNFKA----LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH----GH 408
N LV ++ +GSL +L + Y + + + + A L +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 125
Query: 409 STPVV-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMA 461
P + H DLK NIL+ +N ++D G L DS T+ IA T YMA
Sbjct: 126 GKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 462 PEFGSEG-NVS-----SKCDVYSYGILLLETFTR 489
PE + N+ + D+Y+ G++ E R
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKILSSC 356
+G G FG V++G G VA+KIF+ + E RS+ E E+ + V RH N++ +++
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 357 CNTNFKA----LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH----GH 408
N LV ++ +GSL +L + Y + + + + A L +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 127
Query: 409 STPVV-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMA 461
P + H DLK NIL+ +N ++D G L DS T+ IA T YMA
Sbjct: 128 GKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 462 PEFGSEG-NVS-----SKCDVYSYGILLLETFTR 489
PE + N+ + D+Y+ G++ E R
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 21/205 (10%)
Query: 299 LGSGGFGSV--YKGILSDGTTVAIKIFN------LQLEQAFRSFNSECEVLRNVRHRNLI 350
+G G F V + IL+ G VAIKI + L++ FR E +++ + H N++
Sbjct: 20 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFR----EVRIMKILNHPNIV 74
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ L++E+ G + +L +H ++ R + A++Y H
Sbjct: 75 KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKR-- 131
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGSEGN 469
+VH DLK N+LLD +M ++DFG S G + T + Y APE F +
Sbjct: 132 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDTFC-GSPPYAAPELFQGKKY 187
Query: 470 VSSKCDVYSYGILLLETFTRKKPTD 494
+ DV+S G++L + P D
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L++ + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E+ P G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+++D+ V+DFG++K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILSDGTT-VAIKIFNLQLEQA--FRSFNSECEVLRNV 344
R TD + LG G F V + + T A KI N + A + E + R +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
+H N++++ S F LV + + G L + + + Y+ + D + + + LE +
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-ADASHCIHQI---LESV 143
Query: 405 HHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
+H H +VH DLKP N+LL + ++DFG++ + +G+ T GY++
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFA-GTPGYLS 201
Query: 462 PEFGSEGNVSSKCDVYSYGILL 483
PE + D+++ G++L
Sbjct: 202 PEVLRKDPYGKPVDIWACGVIL 223
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV EF+ K + IP L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDL--KTFMDASALTGIPLPL-IKSYLFQLLQGLA 120
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 178
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 179 LGCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 33/214 (15%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKILSSC 356
+G G FG V++G G VA+KIF+ + E RS+ E E+ + V RH N++ +++
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 357 CNTNFKA----LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH----GH 408
N LV ++ +GSL +L + Y + + + + A L +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 163
Query: 409 STPVV-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMA 461
P + H DLK NIL+ +N ++D G L DS T+ IA T YMA
Sbjct: 164 GKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 462 PEFGSEG------NVSSKCDVYSYGILLLETFTR 489
PE + + D+Y+ G++ E R
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 33/214 (15%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKILSSC 356
+G G FG V++G G VA+KIF+ + E RS+ E E+ + V RH N++ +++
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 357 CNTNFKA----LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH----GH 408
N LV ++ +GSL +L + Y + + + + A L +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 130
Query: 409 STPVV-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMA 461
P + H DLK NIL+ +N ++D G L DS T+ IA T YMA
Sbjct: 131 GKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 462 PEFGSEG-NVS-----SKCDVYSYGILLLETFTR 489
PE + N+ + D+Y+ G++ E R
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 83
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 142
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+DE V+DFG +K + +G + T Y+AP
Sbjct: 143 YLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 194
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 195 EIILSKGYNKAVDWWALGVLIYE 217
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 83/202 (41%), Gaps = 23/202 (11%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNL 349
D ++ LG+G FG V++ + G A K E + E + + +RH L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 350 IKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH---- 405
+ + + + N ++ EFM G L F+ + D N M + A+EY+
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGEL---------FEKVADEHNKMSEDE-AVEYMRQVCK 160
Query: 406 ---HGHSTPVVHCDLKPSNILLDENMVAHVS--DFGISKLLGEGDDSVIQTMTIATIGYM 460
H H VH DLKP NI+ + DFG++ L D +T T +
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFA 217
Query: 461 APEFGSEGNVSSKCDVYSYGIL 482
APE V D++S G+L
Sbjct: 218 APEVAEGKPVGYYTDMWSVGVL 239
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 213 QRLQVPPCKEDKNKGFKKVALLVLKYIFPPIICVVLIALVFIFFLRRRNRSTKSPDDEEL 272
QRL+ PCK+ F+++ L +Y+ L ++ F FL+
Sbjct: 131 QRLEQGPCKDL----FQELTRLTHEYLSVAPFADYLDSIYFNRFLQ-------------- 172
Query: 273 FSLATWRRTSYLDLERAT-DGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQA 330
W+ +L+ + T + F + +LG GGFG V + + G A K + +
Sbjct: 173 -----WK---WLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 331 FRSFN---SECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDI 387
+ +E ++L V R ++ + + + LVL M G L +Y H
Sbjct: 225 RKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGF 283
Query: 388 PDRLNIM--IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445
P+ + ++ LE LH +V+ DLKP NILLD++ +SD G++ + EG
Sbjct: 284 PEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG- 339
Query: 446 DSVIQTMT--IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
QT+ + T+GYMAPE + D ++ G LL E + P
Sbjct: 340 ----QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 19/202 (9%)
Query: 297 NLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILS 354
++LG G V I L A+KI Q E E+L + HRN+++++
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ LV E M GS+ ++ +F ++ + ++ DVA AL++LH + + H
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGIAH 134
Query: 415 CDLKPSNILLDE-NMVAHVS--DFGI-SKLLGEGDDSVIQTMTIAT----IGYMAPE--- 463
DLKP NIL + N V+ V DFG+ S + GD S I T + T YMAPE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 464 -FGSEGNVSSK-CDVYSYGILL 483
F E ++ K CD++S G++L
Sbjct: 195 AFSEEASIYDKRCDLWSLGVIL 216
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 33/214 (15%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKILSSC 356
+G G FG V++G G VA+KIF+ + E RS+ E E+ + V RH N++ +++
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 357 CNTNFKA----LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH----GH 408
N LV ++ +GSL +L + Y + + + + A L +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQ 150
Query: 409 STPVV-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMA 461
P + H DLK NIL+ +N ++D G L DS T+ IA T YMA
Sbjct: 151 GKPAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 462 PEFGSEG------NVSSKCDVYSYGILLLETFTR 489
PE + + D+Y+ G++ E R
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L K+ S + + +V+E+ P G + L F + P + L EYLH
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+++D+ V+DFG +K + +G + T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 211
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L K+ S + + +V+E+ P G + L F + P + L EYLH
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+++D+ V+DFG +K + +G + T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 211
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 295 ECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKI 352
EC +G G +G V++G G VA+KIF+ + E +S+ E E+ V RH N++
Sbjct: 14 EC--VGKGRYGEVWRGSWQ-GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGF 67
Query: 353 LSSCCNTNFKA----LVLEFMPNGSLDKWLYSHNYFQ----DIPDRLNIMIDVALALEYL 404
++S + + L+ + GSL ++Y Q D L I++ +A L +L
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSL------YDYLQLTTLDTVSCLRIVLSIASGLAHL 121
Query: 405 H----HGHSTPVV-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS--VIQTMTIATI 457
H P + H DLK NIL+ +N ++D G++ + + + V + T
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 458 GYMAPEFGSEG------NVSSKCDVYSYGILLLETFTR 489
YMAPE E + + D++++G++L E R
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 295 ECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKI 352
EC +G G +G V++G G VA+KIF+ + E +S+ E E+ V RH N++
Sbjct: 14 EC--VGKGRYGEVWRGSWQ-GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGF 67
Query: 353 LSSCCNTNFKA----LVLEFMPNGSLDKWLYSHNYFQ----DIPDRLNIMIDVALALEYL 404
++S + + L+ + GSL ++Y Q D L I++ +A L +L
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSL------YDYLQLTTLDTVSCLRIVLSIASGLAHL 121
Query: 405 H----HGHSTPVV-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS--VIQTMTIATI 457
H P + H DLK NIL+ +N ++D G++ + + + V + T
Sbjct: 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 181
Query: 458 GYMAPEFGSEG------NVSSKCDVYSYGILLLETFTR 489
YMAPE E + + D++++G++L E R
Sbjct: 182 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 293 FNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVR 345
F+ LLG G FG V IL + G A+KI ++ + +E VL+N R
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H L + + + V+E+ G L L F + R ++ ALEYLH
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH 122
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S VV+ D+K N++LD++ ++DFG+ K G D + ++T T Y+APE
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVL 177
Query: 466 SEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D + G+++ E + P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L K+ S + + +V+E+ P G + L F + P + L EYLH
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXE-PHARFYAAQIVLTFEYLH 159
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+++D+ V+DFG +K + +G + T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 211
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 293 FNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVR 345
F+ LLG G FG V IL + G A+KI ++ + +E VL+N R
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H L + + + V+E+ G L L F + R ++ ALEYLH
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH 122
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S VV+ D+K N++LD++ ++DFG+ K G D + ++T T Y+APE
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVL 177
Query: 466 SEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D + G+++ E + P
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 100
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E+ P G + L F + P + L EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+++D+ V+DFG +K + +G + T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 211
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 299 LGSGGFGSV--YKGILSDGTTVAIKIFNL------QLEQAFRSFNSECEVLRNVRHRNLI 350
+G G F V + IL+ G VA++I + L++ FR E +++ + H N++
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIV 76
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ LV+E+ G + +L +H ++ R + A++Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF-- 133
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGSEGN 469
+VH DLK N+LLD +M ++DFG S G+ + T + Y APE F +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFC-GSPPYAAPELFQGKKY 189
Query: 470 VSSKCDVYSYGILLLETFTRKKPTD 494
+ DV+S G++L + P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 293 FNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVR 345
F+ LLG G FG V IL + G A+KI ++ + +E VL+N R
Sbjct: 10 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H L + + + V+E+ G L L F + R ++ ALEYLH
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH 125
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S VV+ D+K N++LD++ ++DFG+ K G D + ++T T Y+APE
Sbjct: 126 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPEVL 180
Query: 466 SEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D + G+++ E + P
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 83/202 (41%), Gaps = 23/202 (11%)
Query: 291 DGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNL 349
D ++ LG+G FG V++ + G A K E + E + + +RH L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 350 IKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH---- 405
+ + + + N ++ EFM G L F+ + D N M + A+EY+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGEL---------FEKVADEHNKMSEDE-AVEYMRQVCK 266
Query: 406 ---HGHSTPVVHCDLKPSNILLDENMVAHVS--DFGISKLLGEGDDSVIQTMTIATIGYM 460
H H VH DLKP NI+ + DFG++ L D +T T +
Sbjct: 267 GLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFA 323
Query: 461 APEFGSEGNVSSKCDVYSYGIL 482
APE V D++S G+L
Sbjct: 324 APEVAEGKPVGYYTDMWSVGVL 345
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 299 LGSGGFGSV--YKGILSDGTTVAIKIFNL------QLEQAFRSFNSECEVLRNVRHRNLI 350
+G G F V + IL+ G VA+KI + L++ FR E +++ + H N++
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIV 76
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ LV+E+ G + +L +H ++ R + A++Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF-- 133
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGSEGN 469
+VH DLK N+LLD +M ++DFG S G+ Y APE F +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DAFCGAPPYAAPELFQGKKY 189
Query: 470 VSSKCDVYSYGILLLETFTRKKPTD 494
+ DV+S G++L + P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 44/289 (15%)
Query: 213 QRLQVPPCKEDKNKGFKKVALLVLKYIFPPIICVVLIALVFIFFLRRRNRSTKSPDDEEL 272
QRL+ PCK+ F+++ L +Y+ L ++ F FL+
Sbjct: 131 QRLEQGPCKDL----FQELTRLTHEYLSVAPFADYLDSIYFNRFLQ-------------- 172
Query: 273 FSLATWRRTSYLDLERAT-DGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQA 330
W+ +L+ + T + F + +LG GGFG V + + G A K + +
Sbjct: 173 -----WK---WLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 331 FRSFN---SECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDI 387
+ +E ++L V R ++ + + + LVL M G L +Y H
Sbjct: 225 RKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGF 283
Query: 388 PDRLNIM--IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445
P+ + ++ LE LH +V+ DLKP NILLD++ +SD G++ + EG
Sbjct: 284 PEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG- 339
Query: 446 DSVIQTMT--IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
QT+ + T+GYMAPE + D ++ G LL E + P
Sbjct: 340 ----QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++ G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 295 ECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKI 352
EC +G G +G V++G G VA+KIF+ + E +S+ E E+ V RH N++
Sbjct: 43 EC--VGKGRYGEVWRGSWQ-GENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGF 96
Query: 353 LSSCCNTNFKA----LVLEFMPNGSLDKWLYSHNYFQ----DIPDRLNIMIDVALALEYL 404
++S + + L+ + GSL ++Y Q D L I++ +A L +L
Sbjct: 97 IASDMTSRHSSTQLWLITHYHEMGSL------YDYLQLTTLDTVSCLRIVLSIASGLAHL 150
Query: 405 H----HGHSTPVV-HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS--VIQTMTIATI 457
H P + H DLK NIL+ +N ++D G++ + + + V + T
Sbjct: 151 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTK 210
Query: 458 GYMAPEFGSEG------NVSSKCDVYSYGILLLETFTR 489
YMAPE E + + D++++G++L E R
Sbjct: 211 RYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLX----GTPEYLAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 299 LGSGGFGSV--YKGILSDGTTVAIKIFN------LQLEQAFRSFNSECEVLRNVRHRNLI 350
+G G F V + IL+ G VAIKI + L++ FR E +++ + H N++
Sbjct: 23 IGKGNFAKVKLARHILT-GREVAIKIIDKTQLNPTSLQKLFR----EVRIMKILNHPNIV 77
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ L++E+ G + +L +H ++ R + A++Y H
Sbjct: 78 KLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQKR-- 134
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG---YMAPE-FGS 466
+VH DLK N+LLD +M ++DFG S ++ + A G Y APE F
Sbjct: 135 -IVHRDLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDAFCGAPPYAAPELFQG 187
Query: 467 EGNVSSKCDVYSYGILLLETFTRKKPTD 494
+ + DV+S G++L + P D
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 87/178 (48%), Gaps = 7/178 (3%)
Query: 315 GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSL 374
G VA+K+ +L+ +Q +E ++R+ +H N++++ S +++EF+ G+L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 375 DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSD 434
+ ++ I L+ L + H+ V+H D+K +ILL + +SD
Sbjct: 130 TDIVSQVRLNEE-----QIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSD 184
Query: 435 FGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
FG + + D + + T +MAPE S +++ D++S GI+++E + P
Sbjct: 185 FGFCAQISK--DVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Query: 387 IPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446
+ D ++ VA +E+L S +H DL NILL EN V + DFG+++ + + D
Sbjct: 198 MEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPD 254
Query: 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
V + T + +MAPE + S+K DV+SYG+LL E F+
Sbjct: 255 YVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 20/210 (9%)
Query: 297 NLLGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILS 354
L+G G FG VY G VAI++ +++ E ++F E R RH N++ +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+C + A++ +L + D+ I ++ + YLH + ++H
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILH 153
Query: 415 CDLKPSNILLDENMVAHVSDFG---ISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGN-- 469
DLK N+ D V ++DFG IS +L G + + ++APE + +
Sbjct: 154 KDLKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 470 -------VSSKCDVYSYGILLLETFTRKKP 492
S DV++ G + E R+ P
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 95/217 (43%), Gaps = 18/217 (8%)
Query: 284 LDLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL---EQAFRSFNS 336
+D + + F+ LLG G FG V IL + G A+KI ++ + +
Sbjct: 3 MDPKVTMNDFDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVT 59
Query: 337 ECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMID 396
E VL+N RH L + + + V+E+ G L L F + R +
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 118
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSVIQTMTIA 455
+ ALEYLH S VV+ D+K N++LD++ ++DFG+ K EG D
Sbjct: 119 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCG 172
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
T Y+APE + + D + G+++ E + P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 11/207 (5%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVR 345
+ + F + +G G +G VYK G VA+K L + E + E +L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+L N LV E + + L K++ + + IP L I + L+ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLA 120
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-- 463
HS V+H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEIL 178
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRK 490
G + S+ D++S G + E TR+
Sbjct: 179 LGCK-YYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 189
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F LG+G FG V + G A+KI + Q L+Q + N E + + V
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLN-EKRIQQAVN 100
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +VLE+ P G + L F + P + L EYLH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFEYLH 159
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 160 ---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV-KGRTWXL----CGTPEYLAPEII 211
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 212 LSKGYNKAVDWWALGVLIYE 231
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 91
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-PHARFYAAQIVLTFE 150
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 151 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 202
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 203 EIILSKGYNKAVDWWALGVLIYE 225
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIK---IFNLQLEQAFRSFNSECEVLRNVR 345
+ F +LLG G +G V G VAIK F+ L A R+ E ++L++ +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-FALRTLR-EIKILKHFK 67
Query: 346 HRNLIKILS-----SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA 400
H N+I I + S N N ++ E M L + + + D +I +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD-----HIQYFIYQT 121
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE--GDDSVI------QTM 452
L + H + V+H DLKPSN+L++ N V DFG+++++ E D+S T
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 453 TIATIGYMAPEFG-SEGNVSSKCDVYSYGILLLETFTRK 490
+AT Y APE + S DV+S G +L E F R+
Sbjct: 182 XVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMA 461
YLH S +++ DLKP N+L+D+ V+DFG +K + +T + T Y+A
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLA 206
Query: 462 PEFGSEGNVSSKCDVYSYGILLLE 485
PE + D ++ G+L+ E
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 97
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 156
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 157 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 208
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYE 231
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 107/256 (41%), Gaps = 43/256 (16%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNS--ECEVLRNVR 345
+ D + LG G +G VYK I + TVAIK L+ E+ + E +L+ ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA--LEY 403
HRN+I++ S + + L+ E+ N L K Y PD +I L +
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN-DLKK------YMDKNPDVSMRVIKSFLYQLING 144
Query: 404 LHHGHSTPVVHCDLKPSNILL-----DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG 458
++ HS +H DLKP N+LL E V + DFG+++ G T I T+
Sbjct: 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--THEIITLW 202
Query: 459 YMAPE--FGSEGNVSSKCDVYSYGILLLETFTRKK--------------------PTDEM 496
Y PE GS + S+ D++S + E + P D
Sbjct: 203 YRPPEILLGSR-HYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT 261
Query: 497 FTGEMNLKNWVKESLP 512
+ G L +W K+S P
Sbjct: 262 WPGVTALPDW-KQSFP 276
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 117
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-PHARFYAAQIVLTFE 176
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 177 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 228
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYE 251
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSXQEYSDW 220
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 293 FNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVR 345
F+ LLG G FG V IL + G A+KI ++ + +E VL+N R
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H L + + + V+E+ G L L F + R ++ ALEYLH
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH 122
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSVIQTMTIATIGYMAPEF 464
S VV+ D+K N++LD++ ++DFG+ K EG D T Y+APE
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEV 176
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D + G+++ E + P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 293 FNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVR 345
F+ LLG G FG V IL + G A+KI ++ + +E VL+N R
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H L + + + V+E+ G L L F + R ++ ALEYLH
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH 122
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSVIQTMTIATIGYMAPEF 464
S VV+ D+K N++LD++ ++DFG+ K EG D T Y+APE
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEV 176
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D + G+++ E + P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 17/227 (7%)
Query: 267 PDDEEL-FSLATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIK 321
P E L F A T +++R C +G G FG V++GI + VAIK
Sbjct: 15 PTTENLYFQGAMGSSTRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIK 72
Query: 322 IF-NLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYS 380
N + F E +R H +++K++ N +++E G L +L
Sbjct: 73 TCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQV 131
Query: 381 HNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440
Y D+ + ++ AL YL S VH D+ N+L+ N + DFG+S+
Sbjct: 132 RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 188
Query: 441 LGEGDDSVIQTMTIAT--IGYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+ +DS + I +MAPE + +S DV+ +G+ + E
Sbjct: 189 M---EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 232
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 19/225 (8%)
Query: 268 DDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIF 323
D+E+ +++ + T +++R C +G G FG V++GI + VAIK
Sbjct: 372 DEEDTYTMPS---TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTC 426
Query: 324 -NLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHN 382
N + F E +R H +++K++ N +++E G L +L
Sbjct: 427 KNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK 485
Query: 383 YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442
+ D+ + ++ AL YL S VH D+ N+L+ N + DFG+S+ +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM- 541
Query: 443 EGDDSVIQTMTIAT--IGYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+DS + I +MAPE + +S DV+ +G+ + E
Sbjct: 542 --EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 293 FNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVR 345
F+ LLG G FG V IL + G A+KI ++ + +E VL+N R
Sbjct: 7 FDYLKLLGKGTFGKV---ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H L + + + V+E+ G L L F + R ++ ALEYLH
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH 122
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSVIQTMTIATIGYMAPEF 464
S VV+ D+K N++LD++ ++DFG+ K EG D T Y+APE
Sbjct: 123 ---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAPEV 176
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D + G+++ E + P
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 297 NLLGSGGFGSVYKGILSDGTTV---AIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
N +G G +G V K + GT + A KI +E R F E E+++++ H N+I++
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNIIRLY 72
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
+ + LV+E G L + + F++ D IM DV A+ Y H + V
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRE-SDAARIMKDVLSAVAYCHKLN---VA 128
Query: 414 HCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNV 470
H DLKP N L + + DFG++ G + + T Y++P+ EG
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQV-LEGLY 184
Query: 471 SSKCDVYSYGILL 483
+CD +S G+++
Sbjct: 185 GPECDEWSAGVMM 197
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 299 LGSGGFGSV--YKGILSDGTTVAIKIFNL------QLEQAFRSFNSECEVLRNVRHRNLI 350
+G G F V + IL+ G VA++I + L++ FR E +++ + H N++
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVRIIDKTQLNSSSLQKLFR----EVRIMKVLNHPNIV 76
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ LV+E+ G + +L +H ++ R + A++Y H
Sbjct: 77 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF-- 133
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGSEGN 469
+VH DLK N+LLD +M ++DFG S G+ + Y APE F +
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAAPELFQGKKY 189
Query: 470 VSSKCDVYSYGILLLETFTRKKPTD 494
+ DV+S G++L + P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 291 DGFNECNLLGSGGFGSVY-KGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVR 345
D F+ LG+G FG V G A+KI + Q L+Q + N E +L+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQAVN 99
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
L+K+ S + + +V+E++ G + L F + P + L EYLH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXE-PHARFYAAQIVLTFEYLH 158
Query: 406 HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG 465
S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+APE
Sbjct: 159 ---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAPEII 210
Query: 466 SEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 211 LSKGYNKAVDWWALGVLIYE 230
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNL--QLEQAFRSFNSECEVLRNVRHR 347
+ F + +G G +G VYK G VA+K L + E + E +L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+L N LV E + K + IP L I + L+ L
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDL--KTFMDASALTGIPLPL-IKSYLFQLLQGLAFC 118
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FG 465
HS V+H DLKP N+L++ ++DFG+++ G + T + T+ Y APE G
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLG 176
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
+ S+ D++S G + E TR+
Sbjct: 177 CK-YYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 26/219 (11%)
Query: 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIK---IFNLQLEQAFRSFNSECEVLRNVR 345
+ F +LLG G +G V G VAIK F+ L A R+ E ++L++ +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-FALRTLR-EIKILKHFK 67
Query: 346 HRNLIKILS-----SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA 400
H N+I I + S N N ++ E M L + + + D +I +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD-----HIQYFIYQT 121
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE--GDDSVI------QTM 452
L + H + V+H DLKPSN+L++ N V DFG+++++ E D+S T
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 453 TIATIGYMAPEFG-SEGNVSSKCDVYSYGILLLETFTRK 490
+AT Y APE + S DV+S G +L E F R+
Sbjct: 182 YVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 285 DLERATDGFNEC-----------NLLGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAF 331
D ++A+ NEC +GSGG V++ + AIK NL+ Q
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 332 RSFNSECEVLRNVRHRN--LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPD 389
S+ +E L ++ + +I++ + +V+E N L+ WL D +
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWE 156
Query: 390 RLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVI 449
R + ++ LE +H H +VH DLKP+N L+ + M+ + DFGI+ + SV+
Sbjct: 157 RKSYWKNM---LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVV 212
Query: 450 QTMTIATIGYMAPE 463
+ + T+ YM PE
Sbjct: 213 KDSQVGTVNYMPPE 226
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 297 NLLGSGGFGSVYKGILSDGTTV---AIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
N +G G +G V K + GT + A KI +E R F E E+++++ H N+I++
Sbjct: 32 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNIIRLY 89
Query: 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413
+ + LV+E G L + + F++ D IM DV A+ Y H + V
Sbjct: 90 ETFEDNTDIYLVMELCTGGELFERVVHKRVFRE-SDAARIMKDVLSAVAYCHKLN---VA 145
Query: 414 HCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNV 470
H DLKP N L + + DFG++ G + + T Y++P+ EG
Sbjct: 146 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQV-LEGLY 201
Query: 471 SSKCDVYSYGILL 483
+CD +S G+++
Sbjct: 202 GPECDEWSAGVMM 214
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 32/239 (13%)
Query: 285 DLERATDGFNEC-----------NLLGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAF 331
D ++A+ NEC +GSGG V++ + AIK NL+ Q
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 332 RSFNSECEVLRNVRHRN--LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPD 389
S+ +E L ++ + +I++ + +V+E N L+ WL D +
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWE 156
Query: 390 RLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVI 449
R + ++ LE +H H +VH DLKP+N L+ + M+ + DFGI+ + SV+
Sbjct: 157 RKSYWKNM---LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVV 212
Query: 450 QTMTIATIGYMAPEFGSEGNVSSK-----------CDVYSYGILLLETFTRKKPTDEMF 497
+ + T+ YM PE + + S + DV+S G +L K P ++
Sbjct: 213 KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 286 LERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQL-EQAFRSFNSECEV-LR 342
+E D LG G +G V K + G +A+K + Q + + ++ +R
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH--NYFQDIPDRL--NIMIDVA 398
V + + + +E M + SLDK+ Y + Q IP+ + I + +
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICMELM-DTSLDKF-YKQVIDKGQTIPEDILGKIAVSIV 119
Query: 399 LALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG 458
ALE+LH S V+H D+KPSN+L++ + DFGIS L D V + +
Sbjct: 120 KALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DDVAKDIDAGCKP 174
Query: 459 YMAPE-FGSEGN---VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513
YMAPE E N S K D++S GI ++E + P D T LK V+E P
Sbjct: 175 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ 233
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMA 461
YLH S +++ DLKP N+++D+ V+DFG +K + +T + T Y+A
Sbjct: 156 YLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPEYLA 206
Query: 462 PEFGSEGNVSSKCDVYSYGILLLE 485
PE + D ++ G+L+ E
Sbjct: 207 PEIIISKGYNKAVDWWALGVLIYE 230
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTT---VAIKIFNLQ--LEQAFRSFNSECEVLRNVRHR 347
+N +LG G FG V K D T A+K+ N + + E E+L+ + H
Sbjct: 24 YNIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+ +++ +V E G L + F + D I+ V + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMHKH 140
Query: 408 HSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
+ +VH DLKP NILL +++ + DFG+S + + I T Y+APE
Sbjct: 141 N---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEV 194
Query: 465 GSEGNVSSKCDVYSYGILL 483
G KCDV+S G++L
Sbjct: 195 -LRGTYDEKCDVWSAGVIL 212
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIF-NLQLEQAFRSFNSECE 339
+++R C +G G FG V++GI + VAIK N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+R H +++K++ N +++E G L +L Y D+ + ++
Sbjct: 64 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--I 457
AL YL S VH D+ N+L+ N + DFG+S+ + +DS + I
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPI 176
Query: 458 GYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+MAPE + +S DV+ +G+ + E
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIF-NLQLEQAFRSFNSECE 339
+++R C +G G FG V++GI + VAIK N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+R H +++K++ N +++E G L +L Y D+ + ++
Sbjct: 64 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--I 457
AL YL S VH D+ N+L+ N + DFG+S+ + +DS + I
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPI 176
Query: 458 GYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+MAPE + +S DV+ +G+ + E
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 290 TDGFNECNLLGSGGFGSVY--KGILSDGTTVAIKIFNLQLEQAFRSFNS-----ECEVLR 342
+D + LGSG +G V K L+ G AIKI ++ + NS E VL+
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKI--IKKSSVTTTSNSGALLDEVAVLK 76
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
+ H N++K+ + LV+E G L + F ++ D IM V
Sbjct: 77 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVLSGTT 135
Query: 403 YLHHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
YLH + +VH DLKP N+LL+ + + + DFG+S G + T Y
Sbjct: 136 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYY 189
Query: 460 MAPEFGSEGNVSSKCDVYSYGILL 483
+APE + KCDV+S G++L
Sbjct: 190 IAPEVLRK-KYDEKCDVWSCGVIL 212
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTT---VAIKIFNLQ--LEQAFRSFNSECEVLRNVRHR 347
+N +LG G FG V K D T A+K+ N + + E E+L+ + H
Sbjct: 24 YNIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+ +++ +V E G L + F + D I+ V + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMHKH 140
Query: 408 HSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
+ +VH DLKP NILL +++ + DFG+S + + I T Y+APE
Sbjct: 141 N---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEV 194
Query: 465 GSEGNVSSKCDVYSYGILL 483
G KCDV+S G++L
Sbjct: 195 -LRGTYDEKCDVWSAGVIL 212
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIF-NLQLEQAFRSFNSECE 339
+++R C +G G FG V++GI + VAIK N + F E
Sbjct: 11 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+R H +++K++ N +++E G L +L Y D+ + ++
Sbjct: 69 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 127
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--I 457
AL YL S VH D+ N+L+ N + DFG+S+ + +DS + I
Sbjct: 128 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPI 181
Query: 458 GYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+MAPE + +S DV+ +G+ + E
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWE 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 73 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 127
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 187
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 188 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 219
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIF-NLQLEQAFRSFNSECE 339
+++R C +G G FG V++GI + VAIK N + F E
Sbjct: 9 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+R H +++K++ N +++E G L +L Y D+ + ++
Sbjct: 67 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--I 457
AL YL S VH D+ N+L+ N + DFG+S+ + +DS + I
Sbjct: 126 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPI 179
Query: 458 GYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+MAPE + +S DV+ +G+ + E
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWE 207
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 18/199 (9%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTT---VAIKIFNLQ--LEQAFRSFNSECEVLRNVRHR 347
+N +LG G FG V K D T A+K+ N + + E E+L+ + H
Sbjct: 24 YNIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++K+ +++ +V E G L + F + D I+ V + Y+H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE-HDAARIIKQVFSGITYMHKH 140
Query: 408 HSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
+ +VH DLKP NILL +++ + DFG+S + + I T Y+APE
Sbjct: 141 N---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPEV 194
Query: 465 GSEGNVSSKCDVYSYGILL 483
G KCDV+S G++L
Sbjct: 195 -LRGTYDEKCDVWSAGVIL 212
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ +
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQ 230
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIF-NLQLEQAFRSFNSECE 339
+++R C +G G FG V++GI + VAIK N + F E
Sbjct: 3 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+R H +++K++ N +++E G L +L Y D+ + ++
Sbjct: 61 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--I 457
AL YL S VH D+ N+L+ N + DFG+S+ + +DS + I
Sbjct: 120 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPI 173
Query: 458 GYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+MAPE + +S DV+ +G+ + E
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWE 201
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIF-NLQLEQAFRSFNSECE 339
+++R C +G G FG V++GI + VAIK N + F E
Sbjct: 8 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+R H +++K++ N +++E G L +L Y D+ + ++
Sbjct: 66 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 124
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--I 457
AL YL S VH D+ N+L+ N + DFG+S+ + +DS + I
Sbjct: 125 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPI 178
Query: 458 GYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+MAPE + +S DV+ +G+ + E
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWE 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 299 LGSGGFGSVYK----GILSDGTT--VAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLI 350
LG+G FG V + G+ + VA+K+ + + SE +++ ++ +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLY-------------SHNYFQDIPDR--LNIMI 395
+L +C + ++ E+ G L +L SHN + + R L+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 396 DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA 455
VA + +L S +H D+ N+LL VA + DFG+++ + + +++
Sbjct: 174 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+SYGILL E F+
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 280 RTSYLDLERATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSEC 338
R S+++L +DG+ +G G + + + + A+K+ ++++ R + E
Sbjct: 17 RGSHMNL-VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKV----IDKSKRDPSEEI 71
Query: 339 EVL-RNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDV 397
E+L R +H N+I + + LV E M G L + +F + ++ +
Sbjct: 72 EILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTI 130
Query: 398 ALALEYLHHGHSTPVVHCDLKPSNIL-LDEN---MVAHVSDFGISKLLGEGDDSVIQTMT 453
+EYLH S VVH DLKPSNIL +DE+ + DFG +K L ++ ++ T
Sbjct: 131 GKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMT-P 185
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
T ++APE CD++S GILL P
Sbjct: 186 CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRNLI 350
F L+G+G +G VYKG + G AIK+ ++ ++ E +L+ HRN+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEINMLKKYSHHRNIA 84
Query: 351 KILSSCCNTNFKA------LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA---- 400
+ N LV+EF GS+ + + + N + + +A
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN--------TKGNTLKEEWIAYICR 136
Query: 401 --LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT-IATI 457
L L H H V+H D+K N+LL EN + DFG+S L D +V + T I T
Sbjct: 137 EILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTP 193
Query: 458 GYMAPEF-----GSEGNVSSKCDVYSYGILLLE 485
+MAPE + K D++S GI +E
Sbjct: 194 YWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 19/202 (9%)
Query: 297 NLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILS 354
++LG G V I L A+KI Q E E+L + HRN+++++
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ LV E M GS+ ++ +F ++ + ++ DVA AL++LH + + H
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV-VVQDVASALDFLH---NKGIAH 134
Query: 415 CDLKPSNILLDE-NMVAHVS--DFGI-SKLLGEGDDSVIQTMTIAT----IGYMAPE--- 463
DLKP NIL + N V+ V DF + S + GD S I T + T YMAPE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 464 -FGSEGNVSSK-CDVYSYGILL 483
F E ++ K CD++S G++L
Sbjct: 195 AFSEEASIYDKRCDLWSLGVIL 216
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 19/198 (9%)
Query: 297 NLLGSGGFGS-VYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRNLIKILS 354
++LG G G+ VY+G+ D VA+K L + F + E ++LR H N+I+
Sbjct: 30 DVLGHGAEGTIVYRGMF-DNRDVAVKRI---LPECFSFADREVQLLRESDEHPNVIRYFC 85
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ + F+ + +E +L +++ ++ + + ++ L +LH S +VH
Sbjct: 86 TEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVH 141
Query: 415 CDLKPSNILLD-----ENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEFGSEG 468
DLKP NIL+ + A +SDFG+ K L G S + + T G++APE SE
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 469 ---NVSSKCDVYSYGILL 483
N + D++S G +
Sbjct: 202 CKENPTYTVDIFSAGCVF 219
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 16/208 (7%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIF-NLQLEQAFRSFNSECE 339
+++R C +G G FG V++GI + VAIK N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+R H +++K++ N +++E G L +L + D+ + ++
Sbjct: 64 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--I 457
AL YL S VH D+ N+L+ N + DFG+S+ + +DS + I
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTXXKASKGKLPI 176
Query: 458 GYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+MAPE + +S DV+ +G+ + E
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 17/230 (7%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRS----FNSECEVLRNVRHRNLIKILS 354
+G G F +VYKG+ ++ TTV + LQ + +S F E E L+ ++H N+++
Sbjct: 34 IGRGSFKTVYKGLDTE-TTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 355 SCCNT----NFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
S +T LV E +G+L +L + I + + L++LH +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXK-IKVLRSWCRQILKGLQFLH-TRTP 150
Query: 411 PVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGN 469
P++H DLK NI + + D G++ L + I T + APE E
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXYEE-K 205
Query: 470 VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIA 519
DVY++G LE T + P E + P K+A
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVA 255
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 92/204 (45%), Gaps = 21/204 (10%)
Query: 290 TDGFNECNLLGSGGFGSVY--KGILSDGTTVAIKIFNLQLEQAFRSFNS-----ECEVLR 342
+D + LGSG +G V K L+ G AIKI ++ + NS E VL+
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKI--IKKSSVTTTSNSGALLDEVAVLK 59
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
+ H N++K+ + LV+E G L + F ++ D IM V
Sbjct: 60 QLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVLSGTT 118
Query: 403 YLHHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
YLH + +VH DLKP N+LL+ + + + DFG+S G + T Y
Sbjct: 119 YLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYY 172
Query: 460 MAPEFGSEGNVSSKCDVYSYGILL 483
+APE + KCDV+S G++L
Sbjct: 173 IAPEVLRK-KYDEKCDVWSCGVIL 195
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 291 DGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRSFNS---ECEVLRNVRH 346
D F + +LG GGFG V+ + + G A K N + + + + E ++L V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNY----FQDIPDRLNIMIDVALALE 402
R ++ + + LV+ M G + +Y+ + FQ+ P + + LE
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQIVSGLE 303
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT---IATIGY 459
+LH + +++ DLKP N+LLD++ +SD G++ L G QT T T G+
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-----QTKTKGYAGTPGF 355
Query: 460 MAPE--FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
MAPE G E + S D ++ G+ L E + P
Sbjct: 356 MAPELLLGEEYDFS--VDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 291 DGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRSFNS---ECEVLRNVRH 346
D F + +LG GGFG V+ + + G A K N + + + + E ++L V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNY----FQDIPDRLNIMIDVALALE 402
R ++ + + LV+ M G + +Y+ + FQ+ P + + LE
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQIVSGLE 303
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT---IATIGY 459
+LH + +++ DLKP N+LLD++ +SD G++ L G QT T T G+
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-----QTKTKGYAGTPGF 355
Query: 460 MAPE--FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
MAPE G E + S D ++ G+ L E + P
Sbjct: 356 MAPELLLGEEYDFS--VDYFALGVTLYEMIAARGP 388
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 16/209 (7%)
Query: 290 TDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVL-RNVRHR 347
+DG+ +G G + + + + A+K+ ++++ R + E E+L R +H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKV----IDKSKRDPSEEIEILLRYGQHP 81
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N+I + + LV E M G L + +F + ++ + +EYLH
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-VLHTIGKTVEYLH-- 138
Query: 408 HSTPVVHCDLKPSNIL-LDEN---MVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
S VVH DLKPSNIL +DE+ + DFG +K L ++ ++ T T ++APE
Sbjct: 139 -SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMT-PCYTANFVAPE 195
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
CD++S GILL P
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 291 DGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRSFNS---ECEVLRNVRH 346
D F + +LG GGFG V+ + + G A K N + + + + E ++L V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNY----FQDIPDRLNIMIDVALALE 402
R ++ + + LV+ M G + +Y+ + FQ+ P + + LE
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQIVSGLE 303
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT---IATIGY 459
+LH + +++ DLKP N+LLD++ +SD G++ L G QT T T G+
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-----QTKTKGYAGTPGF 355
Query: 460 MAPE--FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
MAPE G E + S D ++ G+ L E + P
Sbjct: 356 MAPELLLGEEYDFS--VDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 24/215 (11%)
Query: 291 DGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRSFNS---ECEVLRNVRH 346
D F + +LG GGFG V+ + + G A K N + + + + E ++L V
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNY----FQDIPDRLNIMIDVALALE 402
R ++ + + LV+ M G + +Y+ + FQ+ P + + LE
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE-PRAIFYTAQIVSGLE 303
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT---IATIGY 459
+LH + +++ DLKP N+LLD++ +SD G++ L G QT T T G+
Sbjct: 304 HLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-----QTKTKGYAGTPGF 355
Query: 460 MAPE--FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
MAPE G E + S D ++ G+ L E + P
Sbjct: 356 MAPELLLGEEYDFS--VDYFALGVTLYEMIAARGP 388
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y+AP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEYLAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
+ D ++ G+L+ E
Sbjct: 208 AIILSKGYNKAVDWWALGVLIYE 230
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 26/219 (11%)
Query: 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIK---IFNLQLEQAFRSFNSECEVLRNVR 345
+ F +LLG G +G V G VAIK F+ L A R+ E ++L++ +
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL-FALRTLR-EIKILKHFK 67
Query: 346 HRNLIKILS-----SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA 400
H N+I I + S N N ++ E M L + + + D +I +
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDD-----HIQYFIYQT 121
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE--GDDSVIQTMT----- 453
L + H + V+H DLKPSN+L++ N V DFG+++++ E D+S
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 454 -IATIGYMAPEFG-SEGNVSSKCDVYSYGILLLETFTRK 490
+AT Y APE + S DV+S G +L E F R+
Sbjct: 182 FVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + T VAIK + Q + R+ E ++L RH
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRK--TRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHE 101
Query: 348 NLIKILSSCCNTNFKAL----VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEY 403
N+I I + +A+ +++ + L K L S D +I + L
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSND-----HICYFLYQILRG 156
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+L++ + DFG++++ E D + T +AT Y AP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 217 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 245
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 293 FNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQLEQAFRSFN---SECEVLRNVR 345
F LLG G FG V IL + G A+KI ++ A +E VL+N R
Sbjct: 150 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-IDVALALEYL 404
H L + S + V+E+ G L L F + DR ++ AL+YL
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE--DRARFYGAEIVSALDYL 264
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H + VV+ DLK N++LD++ ++DFG+ K G D + ++T T Y+APE
Sbjct: 265 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTF-CGTPEYLAPEV 320
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D + G+++ E + P
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 94/208 (45%), Gaps = 17/208 (8%)
Query: 293 FNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQLEQAFRSFN---SECEVLRNVR 345
F LLG G FG V IL + G A+KI ++ A +E VL+N R
Sbjct: 153 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-IDVALALEYL 404
H L + S + V+E+ G L L F + DR ++ AL+YL
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE--DRARFYGAEIVSALDYL 267
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H + VV+ DLK N++LD++ ++DFG+ K G D + ++T T Y+APE
Sbjct: 268 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTF-CGTPEYLAPEV 323
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D + G+++ E + P
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 21/194 (10%)
Query: 285 DLERATDGFNEC-----------NLLGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAF 331
D ++A+ NEC +GSGG V++ + AIK NL+ Q
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL 98
Query: 332 RSFNSECEVLRNVRHRN--LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPD 389
S+ +E L ++ + +I++ + +V+E N L+ WL D +
Sbjct: 99 DSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWE 156
Query: 390 RLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVI 449
R + ++ LE +H H +VH DLKP+N L+ + M+ + DFGI+ + SV+
Sbjct: 157 RKSYWKNM---LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVV 212
Query: 450 QTMTIATIGYMAPE 463
+ + + YM PE
Sbjct: 213 KDSQVGAVNYMPPE 226
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 298 LLGSGGFGSVYKGILSD--GTTVAIKIFNLQLEQAF---RSFNSECEVLRNVRHRNLIKI 352
+LG G FG VY+G+ ++ G + + + + + F SE +++N+ H +++K+
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +++E P G L +L + + + + + A+ YL S
Sbjct: 91 IG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINC 146
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
VH D+ NIL+ + DFG+S+ + E +D ++T I +M+PE + ++
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFTT 205
Query: 473 KCDVYSYGILLLETFTRKK 491
DV+ + + + E + K
Sbjct: 206 ASDVWMFAVCMWEILSFGK 224
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 19/225 (8%)
Query: 268 DDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIF 323
D+E+ +++ + T +++R C +G G FG V++GI + VAIK
Sbjct: 372 DEEDTYTMPS---TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTC 426
Query: 324 -NLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHN 382
N + F E +R H +++K++ N +++E G L +L
Sbjct: 427 KNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRK 485
Query: 383 YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442
+ D+ + ++ AL YL S VH D+ N+L+ + DFG+S+ +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM- 541
Query: 443 EGDDSVIQTMTIAT--IGYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+DS + I +MAPE + +S DV+ +G+ + E
Sbjct: 542 --EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRN--LIKILS 354
+GSGG V++ + AIK NL+ Q S+ +E L ++ + +I++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ +V+E N L+ WL D +R + ++ LE +H H +VH
Sbjct: 80 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 134
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK- 473
DLKP+N L+ + M+ + DFGI+ + SV++ + T+ YM PE + + S +
Sbjct: 135 SDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 193
Query: 474 ----------CDVYSYGILLLETFTRKKPTDEMF 497
DV+S G +L K P ++
Sbjct: 194 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 227
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 298 LLGSGGFGSVYKGILSD--GTTVAIKIFNLQLEQAF---RSFNSECEVLRNVRHRNLIKI 352
+LG G FG VY+G+ ++ G + + + + + F SE +++N+ H +++K+
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +++E P G L +L + + + + + A+ YL S
Sbjct: 75 IG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINC 130
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
VH D+ NIL+ + DFG+S+ + E +D ++T I +M+PE + ++
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFTT 189
Query: 473 KCDVYSYGILLLETFTRKK 491
DV+ + + + E + K
Sbjct: 190 ASDVWMFAVCMWEILSFGK 208
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 93/199 (46%), Gaps = 10/199 (5%)
Query: 298 LLGSGGFGSVYKGILSD--GTTVAIKIFNLQLEQAF---RSFNSECEVLRNVRHRNLIKI 352
+LG G FG VY+G+ ++ G + + + + + F SE +++N+ H +++K+
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ +++E P G L +L + + + + + A+ YL S
Sbjct: 79 IG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINC 134
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
VH D+ NIL+ + DFG+S+ + E +D ++T I +M+PE + ++
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFTT 193
Query: 473 KCDVYSYGILLLETFTRKK 491
DV+ + + + E + K
Sbjct: 194 ASDVWMFAVCMWEILSFGK 212
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRN--LIKILS 354
+GSGG V++ + AIK NL+ Q S+ +E L ++ + +I++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ +V+E N L+ WL D +R + ++ LE +H H +VH
Sbjct: 76 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 130
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK- 473
DLKP+N L+ + M+ + DFGI+ + SV++ + T+ YM PE + + S +
Sbjct: 131 SDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 189
Query: 474 ----------CDVYSYGILLLETFTRKKPTDEMF 497
DV+S G +L K P ++
Sbjct: 190 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 223
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 9/192 (4%)
Query: 294 NECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKI 352
++ +LG G FG V+K + G +A KI + + +E V+ + H NLI++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPV 412
+ + N LV+E++ G L + +Y D + M + E + H H +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC---EGIRHMHQMYI 208
Query: 413 VHCDLKPSNILLDENMVAHVS--DFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNV 470
+H DLKP NIL + DFG+++ + + T ++APE + V
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NFGTPEFLAPEVVNYDFV 265
Query: 471 SSKCDVYSYGIL 482
S D++S G++
Sbjct: 266 SFPTDMWSVGVI 277
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 16/127 (12%)
Query: 391 LNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL--GEGDDSV 448
L+I I +A A+E+LH S ++H DLKPSNI + V V DFG+ + E + +V
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 449 IQTM--------TIATIGYMAPEFGSEGNVSSKCDVYSYGILLLE---TFTRKKPTDEMF 497
+ M + T YM+PE N S K D++S G++L E +F+ + +
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRII 283
Query: 498 TGEMNLK 504
T NLK
Sbjct: 284 TDVRNLK 290
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G +G V + VA+KI +++ + E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 129
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 130 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 189
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRN--LIKILS 354
+GSGG V++ + AIK NL+ Q S+ +E L ++ + +I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ +V+E N L+ WL D +R + ++ LE +H H +VH
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 150
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK- 473
DLKP+N L+ + M+ + DFGI+ + SV++ + T+ YM PE + + S +
Sbjct: 151 SDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 474 ----------CDVYSYGILLLETFTRKKPTDEMF 497
DV+S G +L K P ++
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRN--LIKILS 354
+GSGG V++ + AIK NL+ Q S+ +E L ++ + +I++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ +V+E N L+ WL D +R + ++ LE +H H +VH
Sbjct: 77 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 131
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
DLKP+N L+ + M+ + DFGI+ + SV++ + T+ YM PE
Sbjct: 132 SDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 299 LGSGGFGSVYK----GILSDGTT--VAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLI 350
LG+G FG V + G+ + VA+K+ + + SE +++ ++ +H N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQ---------DIPDRLNIMIDVALAL 401
+L +C + ++ E+ G L +L ++ D L+ VA +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
+L S +H D+ N+LL VA + DFG+++ + + +++ + +MA
Sbjct: 166 AFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 462 PEFGSEGNVSSKCDVYSYGILLLETFT 488
PE + + + DV+SYGILL E F+
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKIFNLQLEQAFRS----FNSECE 339
+++ + F ++G G FG V + + + A+KI N + E R+ F E +
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREERD 126
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQD-IPDRLN--IMID 396
VL N + + + + + N LV+++ G L L + F+D +P+ + + +
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLPEDMARFYIGE 183
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQ-TMTIA 455
+ LA++ +H H VH D+KP N+LLD N ++DFG L DD +Q ++ +
Sbjct: 184 MVLAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVG 238
Query: 456 TIGYMAPEF-----GSEGNVSSKCDVYSYGILLLETFTRKKP 492
T Y++PE G +CD +S G+ + E + P
Sbjct: 239 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 90/198 (45%), Gaps = 15/198 (7%)
Query: 290 TDGFNECNLLGSGGFGSVYKGILSDGTT--VAIKIFNLQLEQAFRSFNSECEVLRNVRHR 347
+D F + LG G VY+ GT A+K+ +++ + +E VL + H
Sbjct: 52 SDFFEVESELGRGATSIVYR-CKQKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHP 108
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N+IK+ +LVLE + G L + Y+ + D + + + A+ YLH
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE-RDAADAVKQILEAVAYLHEN 167
Query: 408 HSTPVVHCDLKPSNILLDE---NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
+VH DLKP N+L + ++DFG+SK++ + V+ T GY APE
Sbjct: 168 G---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPEI 221
Query: 465 GSEGNVSSKCDVYSYGIL 482
+ D++S GI+
Sbjct: 222 LRGCAYGPEVDMWSVGII 239
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA--FRSFNSECEVLRNVRHRNLIKILSS 355
LG G F V + + + G A KI N + A + E + R ++H N++++ S
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 356 CCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
L+ + + G L + + + Y+ + D + + + LE + H H VVH
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYYSE-ADASHCIQQI---LEAVLHCHQMGVVHR 145
Query: 416 DLKPSNILLDENM---VAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSS 472
DLKP N+LL + ++DFG++ + EG+ T GY++PE +
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFA-GTPGYLSPEVLRKDPYGK 203
Query: 473 KCDVYSYGILL 483
D+++ G++L
Sbjct: 204 PVDLWACGVIL 214
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 105/222 (47%), Gaps = 23/222 (10%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGILSDGTTV-AIKIFNLQLEQAFRS----FNSECE 339
+++ + F ++G G FG V + + + A+KI N + E R+ F E +
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILN-KWEMLKRAETACFREERD 142
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQD-IPDRLN--IMID 396
VL N + + + + + N LV+++ G L L + F+D +P+ + + +
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLPEDMARFYIGE 199
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQ-TMTIA 455
+ LA++ +H H VH D+KP N+LLD N ++DFG L DD +Q ++ +
Sbjct: 200 MVLAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVG 254
Query: 456 TIGYMAPEF-----GSEGNVSSKCDVYSYGILLLETFTRKKP 492
T Y++PE G +CD +S G+ + E + P
Sbjct: 255 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 299 LGSGGFGSVYK----GILSDGTT--VAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLI 350
LG+G FG V + G+ + VA+K+ + + SE +++ ++ +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQ---------DIPDRLNIMIDVALAL 401
+L +C + ++ E+ G L +L ++ D L+ VA +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
+L S +H D+ N+LL VA + DFG+++ + + +++ + +MA
Sbjct: 174 AFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 462 PEFGSEGNVSSKCDVYSYGILLLETFT 488
PE + + + DV+SYGILL E F+
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 29/233 (12%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIK----IFNLQLEQAFRSFNSECEVLRNVR 345
D + +G+G +G V G VAIK F++ + A R+ E ++L++ +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLR-ELKILKHFK 111
Query: 346 HRNLIKILSSCCNT----NFKAL--VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
H N+I I T FK++ VL+ M L + ++S + + +
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLT-LEHVRYFLYQLLR 169
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL--GEGDDSVIQTMTIATI 457
L+Y+H S V+H DLKPSN+L++EN + DFG+++ L + T +AT
Sbjct: 170 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 458 GYMAPEFG-SEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE 509
Y APE S + D++S G + E R+ ++F G KN+V +
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR----QLFPG----KNYVHQ 271
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 92/208 (44%), Gaps = 18/208 (8%)
Query: 299 LGSGGFGSVYKGIL-----SDGT-TVAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLI 350
LG+G FG V + D VA+K+ + + SE +++ ++ +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGH-- 408
+L +C + ++ E+ G L +L + + I A + LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 409 --------STPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 460
S +H D+ N+LL VA + DFG+++ + + +++ + +M
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 233
Query: 461 APEFGSEGNVSSKCDVYSYGILLLETFT 488
APE + + + DV+SYGILL E F+
Sbjct: 234 APESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 26/219 (11%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIK---IFNLQLEQAFRSFNSECEV---- 340
AT + +G G +G+VYK G VA+K + N ++ EV
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 341 -LRNVRHRNLIKILSSCCNTNFK-----ALVLEFMPNG---SLDKWLYSHNYFQDIPDRL 391
L H N+++++ C + LV E + LDK + I D
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD-- 124
Query: 392 NIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQT 451
+M L++LH + +VH DLKP NIL+ ++DFG++++ + T
Sbjct: 125 -LMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALT 177
Query: 452 MTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRK 490
+ T+ Y APE + ++ D++S G + E F RK
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE-QAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G G V + VA+KI +++ + E + + + H N++K
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 357 CNTNFKALVLEFMPNGSL-DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
N + L LE+ G L D+ + PD + + YLH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDR--IEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHR 128
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK-C 474
D+KP N+LLDE +SDFG++ + + + T+ Y+APE ++
Sbjct: 129 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 188
Query: 475 DVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506
DV+S GI+L + P D+ +W
Sbjct: 189 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 299 LGSGGFGSVYKGILS-DGTTVAIK-IFNLQLEQAFRSFNSECEV-LRNVRHRNLIKILSS 355
+G G +GSV K + G +A+K I + E+ + + +V +R+ +++ +
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 356 CCNTNFKALVLEFMPNGSLDK-WLYSHNYFQD-IPDRLNIMIDVALALEYLHHGHSTPVV 413
+ +E M + S DK + Y ++ D IP+ + I +A H + ++
Sbjct: 90 LFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKII 148
Query: 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE----FGSEGN 469
H D+KPSNILLD + + DFGIS G+ DS+ +T YMAPE S
Sbjct: 149 HRDIKPSNILLDRSGNIKLCDFGIS---GQLVDSIAKTRDAGCRPYMAPERIDPSASRQG 205
Query: 470 VSSKCDVYSYGILLLETFTRKKP 492
+ DV+S GI L E T + P
Sbjct: 206 YDVRSDVWSLGITLYELATGRFP 228
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 29/233 (12%)
Query: 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIK----IFNLQLEQAFRSFNSECEVLRNVR 345
D + +G+G +G V G VAIK F++ + A R+ E ++L++ +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLR-ELKILKHFK 112
Query: 346 HRNLIKILSSCCNT----NFKAL--VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
H N+I I T FK++ VL+ M L + ++S + + +
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLT-LEHVRYFLYQLLR 170
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL--GEGDDSVIQTMTIATI 457
L+Y+H S V+H DLKPSN+L++EN + DFG+++ L + T +AT
Sbjct: 171 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 458 GYMAPEFG-SEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE 509
Y APE S + D++S G + E R+ ++F G KN+V +
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR----QLFPG----KNYVHQ 272
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 291 DGFNECNLLGSGGFGSV----YKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLR 342
D F+ LG+G FG V +K G A+KI + Q L+Q + N E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHK---ESGNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
V L+K+ S + + +V+E++ G + L F + P + L E
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-PHARFYAAQIVLTFE 155
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
YLH S +++ DLKP N+L+D+ V+DFG +K + +G + T +AP
Sbjct: 156 YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEALAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLLE 485
E + D ++ G+L+ E
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYE 230
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 293 FNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQLEQAFRSFN---SECEVLRNVR 345
F LLG G FG V IL + G A+KI ++ A +E VL+N R
Sbjct: 12 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-IDVALALEYL 404
H L + S + V+E+ G L L F + DR ++ AL+YL
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE--DRARFYGAEIVSALDYL 126
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSVIQTMTIATIGYMAPE 463
H + VV+ DLK N++LD++ ++DFG+ K EG D T Y+APE
Sbjct: 127 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPE 181
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D + G+++ E + P
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 293 FNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQLEQAFRSFN---SECEVLRNVR 345
F LLG G FG V IL + G A+KI ++ A +E VL+N R
Sbjct: 11 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-IDVALALEYL 404
H L + S + V+E+ G L L F + DR ++ AL+YL
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE--DRARFYGAEIVSALDYL 125
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSVIQTMTIATIGYMAPE 463
H + VV+ DLK N++LD++ ++DFG+ K EG D T Y+APE
Sbjct: 126 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPE 180
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D + G+++ E + P
Sbjct: 181 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 293 FNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQLEQAFRSFN---SECEVLRNVR 345
F LLG G FG V IL + G A+KI ++ A +E VL+N R
Sbjct: 10 FEYLKLLGKGTFGKV---ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-IDVALALEYL 404
H L + S + V+E+ G L L F + DR ++ AL+YL
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE--DRARFYGAEIVSALDYL 124
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG-DDSVIQTMTIATIGYMAPE 463
H + VV+ DLK N++LD++ ++DFG+ K EG D T Y+APE
Sbjct: 125 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAPE 179
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D + G+++ E + P
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 23/216 (10%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEV-----LR 342
AT + +G G +G+VYK G VA+K + + ++ EV L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 343 NVRHRNLIKILSSCCNTNFK-----ALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIM 394
H N+++++ C + LV E + LDK + I D +M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD---LM 118
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
L++LH + +VH DLKP NIL+ ++DFG++++ + +
Sbjct: 119 RQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALAPVV 172
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRK 490
T+ Y APE + ++ D++S G + E F RK
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 33/224 (14%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL VAIK + R F ++ R R L+K+++
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMKVVN- 81
Query: 356 CCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL----------- 404
+ N L+ F P SL+++ + + + L+ +I + L E +
Sbjct: 82 --HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T Y APE
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
D++S G+++ E +F G ++ W K
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 47/248 (18%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKI-----FNLQLEQAFRSFNSECEVLRNV 344
D + C ++G G F V + I + G A+KI F + E + +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSL---------DKWLYSH----NYFQDIPDRL 391
+H +++++L + + +V EFM L ++YS +Y + I
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI---- 139
Query: 392 NIMIDVALALEYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSV 448
LE L + H ++H D+KP N+LL + + + DFG++ LGE +
Sbjct: 140 ---------LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES--GL 188
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP----TDEMFTG----- 499
+ + T +MAPE DV+ G++L + P + +F G
Sbjct: 189 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGK 248
Query: 500 -EMNLKNW 506
+MN + W
Sbjct: 249 YKMNPRQW 256
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 19/215 (8%)
Query: 291 DGFNECNLLGSGGFGSV-YKGILSDGTTVAIKIFN---LQLEQAFRSFNSECEVLRNVRH 346
D F ++G G F V + G A+KI N + F E +VL N
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDR 120
Query: 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLN--IMIDVALALEYL 404
R + ++ + + N+ LV+E+ G L L + + IP + + ++ +A++ +
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLL--SKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H VH D+KP NILLD ++DFG S L D +V + + T Y++PE
Sbjct: 179 HR---LGYVHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVAVGTPDYLSPEI 234
Query: 465 -------GSEGNVSSKCDVYSYGILLLETFTRKKP 492
G+ +CD ++ G+ E F + P
Sbjct: 235 LQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 97/219 (44%), Gaps = 18/219 (8%)
Query: 284 LDLERATDGFNECNLLGSGGFGSVYKGILSD--GTTVAIKIFNLQLEQAFRSFNSEC--- 338
LD + TD FN +LG G FG V +L+D GT I L+ + + + EC
Sbjct: 13 LDRVKLTD-FNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMV 68
Query: 339 --EVLRNVRHRNLIKILSSCCNTNFK-ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMI 395
VL + + L SC T + V+E++ G L + F++ P +
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKE-PQAVFYAA 127
Query: 396 DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA 455
++++ L +LH +++ DLK N++LD ++DFG+ K D V
Sbjct: 128 EISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCG 182
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTD 494
T Y+APE + D ++YG+LL E + P D
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 47/237 (19%)
Query: 293 FNECNLLGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNL 349
+ +GSG G V Y IL VAIK + R F ++ R R L
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVL 76
Query: 350 IKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM---IDVALALEYLH- 405
+K+++ + N L+ F P SL++ FQD+ + +M + + +E H
Sbjct: 77 MKVVN---HKNIIGLLNVFTPQKSLEE-------FQDVYIVMELMDANLSQVIQMELDHE 126
Query: 406 --------------HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQT 451
H HS ++H DLKPSNI++ + + DFG+++ G S + T
Sbjct: 127 RMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMT 183
Query: 452 MTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
+ T Y APE D++S G+++ E +F G ++ W K
Sbjct: 184 PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 23/216 (10%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEV-----LR 342
AT + +G G +G+VYK G VA+K + + ++ EV L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 343 NVRHRNLIKILSSCCNTNFK-----ALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIM 394
H N+++++ C + LV E + LDK + I D +M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD---LM 118
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
L++LH + +VH DLKP NIL+ ++DFG++++ + +
Sbjct: 119 RQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALDPVV 172
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRK 490
T+ Y APE + ++ D++S G + E F RK
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 117/291 (40%), Gaps = 50/291 (17%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRNVRHRNLIKILSSC 356
+G G +G VYK + G T A+K L+ E + E +L+ ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM---IDVALALEYL-------HH 406
LV E + QD+ L++ ++ A +L +
Sbjct: 70 HTKKRLVLVFEHLD--------------QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--F 464
H V+H DLKP N+L++ ++DFG+++ G T I T+ Y AP+
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLM 173
Query: 465 GSEGNVSSKCDVYSYGILLLET------FTRKKPTDEMFT-----GEMNLKNWVK-ESLP 512
GS+ S+ D++S G + E F D++ G N KNW LP
Sbjct: 174 GSK-KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 513 HGLPKIADANLLREENFFSARMDCLLSIFH--LALDCCAELPDQRLYMKDA 561
P L E+F + + + L LD P+QR+ K A
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLD-----PNQRITAKQA 278
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 299 LGSGGFGSVYKGIL-----SDGT-TVAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLI 350
LG+G FG V + D VA+K+ + + SE +++ ++ +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 351 KILSSCCNTNFKALVLEFMPNGSL-------------DKWLYSHNYFQDIPDRLNIMIDV 397
+L +C + ++ E+ G L D N D L+ V
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 398 ALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATI 457
A + +L S +H D+ N+LL VA + DFG+++ + + +++ +
Sbjct: 174 AQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 458 GYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+MAPE + + + DV+SYGILL E F+
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 296 CNLLGSGGFGSVYKGILSD-GTTVAIKIFN-LQLEQAFRSFNSECEVLRNVRHRNLIKIL 353
++LG G +V++G G AIK+FN + + E EVL+ + H+N++K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 354 S--SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHS 409
+ T K L++EF P GSL L + +P+ L ++ DV + +L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---RE 130
Query: 410 TPVVHCDLKPSNILL----DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF- 464
+VH ++KP NI+ D V ++DFG ++ L E D+ + T Y+ P+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVSLY--GTEEYLHPDMY 187
Query: 465 -------GSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D++S G+ T P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 24/214 (11%)
Query: 297 NLLGSGGFGSVYKGILSD-GTTVAIKIFN-LQLEQAFRSFNSECEVLRNVRHRNLIKILS 354
++LG G +V++G G AIK+FN + + E EVL+ + H+N++K+ +
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 355 --SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNIMIDVALALEYLHHGHST 410
T K L++EF P GSL L + +P+ L ++ DV + +L
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---REN 131
Query: 411 PVVHCDLKPSNILL----DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF-- 464
+VH ++KP NI+ D V ++DFG ++ L E D+ + T Y+ P+
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVXLY--GTEEYLHPDMYE 188
Query: 465 ------GSEGNVSSKCDVYSYGILLLETFTRKKP 492
+ + D++S G+ T P
Sbjct: 189 RAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 95/214 (44%), Gaps = 21/214 (9%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRN--LIKILS 354
+GSGG V++ + AIK NL+ Q S+ +E L ++ + +I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 95
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ +V+E N L+ WL D +R + ++ LE +H H +VH
Sbjct: 96 YEITDQYIYMVME-CGNIDLNSWLKKKKSI-DPWERKSYWKNM---LEAVHTIHQHGIVH 150
Query: 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK- 473
DLKP+N L+ + M+ + DFGI+ + V++ + T+ YM PE + + S +
Sbjct: 151 SDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSREN 209
Query: 474 ----------CDVYSYGILLLETFTRKKPTDEMF 497
DV+S G +L K P ++
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 94 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEM--TGYVATRWY 193
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
++ D ++ LGSG F V K S G A K + +A R E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+LR V H N+I + N L+LE + G L +L + + + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILD 126
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSVIQTMTIA 455
+ YLH + + H DLKP NI LLD+N+ + H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 118/291 (40%), Gaps = 50/291 (17%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRNVRHRNLIKILSSC 356
+G G +G VYK + G T A+K L+ E + E +L+ ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM---IDVALALEYL-------HH 406
LV E + QD+ L++ ++ A +L +
Sbjct: 70 HTKKRLVLVFEHLD--------------QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--F 464
H V+H DLKP N+L++ ++DFG+++ G T + T+ Y AP+
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLM 173
Query: 465 GSEGNVSSKCDVYSYGILLLET------FTRKKPTDEMFT-----GEMNLKNWVKES-LP 512
GS+ S+ D++S G + E F D++ G N KNW + LP
Sbjct: 174 GSK-KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 513 HGLPKIADANLLREENFFSARMDCLLSIFH--LALDCCAELPDQRLYMKDA 561
P L E+F + + + L LD P+QR+ K A
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLD-----PNQRITAKQA 278
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIF-NLQLEQAFRSFNSECE 339
+++R C +G G FG V++GI + VAIK N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+R H +++K++ N +++E G L +L + D+ + ++
Sbjct: 64 TMRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT--I 457
AL YL S VH D+ N+L+ + DFG+S+ + +DS + I
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKASKGKLPI 176
Query: 458 GYMAPEFGSEGNVSSKCDVYSYGILLLE 485
+MAPE + +S DV+ +G+ + E
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 35/215 (16%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSEC---------EVLRN 343
+ + +GSG +G+V + DG T A + +++ +R F SE +L++
Sbjct: 27 YRDLQPVGSGAYGAVCSAV--DGRTGA----KVAIKKLYRPFQSELFAKRAYRELRLLKH 80
Query: 344 VRHRNLIKILSSCCN-------TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMID 396
+RH N+I +L T+F LV+ FM L K L H + DR+ +
Sbjct: 81 MRHENVIGLLDVFTPDETLDDFTDF-YLVMPFM-GTDLGK-LMKHEKLGE--DRIQFL-- 133
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
V L+ L + H+ ++H DLKP N+ ++E+ + DFG+++ + D + + T
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXG--XVVT 188
Query: 457 IGYMAPE-FGSEGNVSSKCDVYSYGILLLETFTRK 490
Y APE + + D++S G ++ E T K
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 23/216 (10%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEV-----LR 342
AT + +G G +G+VYK G VA+K + + ++ EV L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 343 NVRHRNLIKILSSCCNTNFK-----ALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIM 394
H N+++++ C + LV E + LDK + I D +M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD---LM 118
Query: 395 IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI 454
L++LH + +VH DLKP NIL+ ++DFG++++ + +
Sbjct: 119 RQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALFPVV 172
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRK 490
T+ Y APE + ++ D++S G + E F RK
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 117/291 (40%), Gaps = 50/291 (17%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRNVRHRNLIKILSSC 356
+G G +G VYK + G T A+K L+ E + E +L+ ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM---IDVALALEYL-------HH 406
LV E + QD+ L++ ++ A +L +
Sbjct: 70 HTKKRLVLVFEHLD--------------QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--F 464
H V+H DLKP N+L++ ++DFG+++ G T + T+ Y AP+
Sbjct: 116 CHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLM 173
Query: 465 GSEGNVSSKCDVYSYGILLLET------FTRKKPTDEMFT-----GEMNLKNWVK-ESLP 512
GS+ S+ D++S G + E F D++ G N KNW LP
Sbjct: 174 GSK-KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP 232
Query: 513 HGLPKIADANLLREENFFSARMDCLLSIFH--LALDCCAELPDQRLYMKDA 561
P L E+F + + + L LD P+QR+ K A
Sbjct: 233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLD-----PNQRITAKQA 278
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
++ D ++ LGSG F V K S G A K + +A R E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+LR V H N+I + N L+LE + G L +L + + + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILD 126
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSVIQTMTIA 455
+ YLH + + H DLKP NI LLD+N+ + H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
++ D ++ LGSG F V K S G A K + +A R E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+LR V H N+I + N L+LE + G L +L + + + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILD 126
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSVIQTMTIA 455
+ YLH + + H DLKP NI LLD+N+ + H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 16/236 (6%)
Query: 298 LLGSGGFGSVYKGILSDGTTVAI---KIFNLQL---EQAFRSFNSECEVLRNVRHRNLIK 351
LG GGF ++ +SD T + KI L + E + R++ H++++
Sbjct: 28 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 85
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ +F +VLE SL + L+ P+ + + L +YLH
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 141
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVS 471
V+H DLK N+ L+E++ + DFG++ + E D +T+ T Y+APE S+ S
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLC-GTPNYIAPEVLSKKGHS 199
Query: 472 SKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE-SLPHGLPKIADANLLRE 526
+ DV+S G ++ K P + E L+ E S+P + +A A+L+++
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 254
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
++ D ++ LGSG F V K S G A K + +A R E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+LR V H N+I + N L+LE + G L +L + + + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILD 126
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSVIQTMTIA 455
+ YLH + + H DLKP NI LLD+N+ + H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 94 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEM--TGYVATRWY 193
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFGSEG-NVSSKCDVYSYGILLLETFT 488
APE + + D++S G ++ E T
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
++ D ++ LGSG F V K S G A K + +A R E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+LR V H N+I + N L+LE + G L +L + + + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILD 126
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSVIQTMTIA 455
+ YLH + + H DLKP NI LLD+N+ + H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 21/205 (10%)
Query: 299 LGSGGFGSV--YKGILSDGTTVAIKIFNL------QLEQAFRSFNSECEVLRNVRHRNLI 350
+G G F V + IL+ G VA+KI + L++ FR E + + + H N++
Sbjct: 22 IGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLFR----EVRIXKVLNHPNIV 76
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST 410
K+ LV E+ G + +L +H ++ R + A++Y H
Sbjct: 77 KLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF-- 133
Query: 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FGSEGN 469
+VH DLK N+LLD + ++DFG S G+ Y APE F +
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKL---DAFCGAPPYAAPELFQGKKY 189
Query: 470 VSSKCDVYSYGILLLETFTRKKPTD 494
+ DV+S G++L + P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 16/236 (6%)
Query: 298 LLGSGGFGSVYKGILSDGTTVAI---KIFNLQL---EQAFRSFNSECEVLRNVRHRNLIK 351
LG GGF ++ +SD T + KI L + E + R++ H++++
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ +F +VLE SL + L+ P+ + + L +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 137
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVS 471
V+H DLK N+ L+E++ + DFG++ + E D +T+ T Y+APE S+ S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLC-GTPNYIAPEVLSKKGHS 195
Query: 472 SKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE-SLPHGLPKIADANLLRE 526
+ DV+S G ++ K P + E L+ E S+P + +A A+L+++
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 250
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 100 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 147
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEM--TGYVATRWY 199
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 41/216 (18%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRN 348
+ + +GSG +GSV G VA+K + + A R++ E +L++++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHEN 82
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIM 394
+I +L F P SL D +L +H D+ D + +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFL 130
Query: 395 I-DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
I + L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEM--TGY 182
Query: 454 IATIGYMAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
+AT Y APE + + + D++S G ++ E T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 16/236 (6%)
Query: 298 LLGSGGFGSVYKGILSDGTTVAI---KIFNLQL---EQAFRSFNSECEVLRNVRHRNLIK 351
LG GGF ++ +SD T + KI L + E + R++ H++++
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 81
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ +F +VLE SL + L+ P+ + + L +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 137
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVS 471
V+H DLK N+ L+E++ + DFG++ + E D +T+ T Y+APE S+ S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLC-GTPNYIAPEVLSKKGHS 195
Query: 472 SKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE-SLPHGLPKIADANLLRE 526
+ DV+S G ++ K P + E L+ E S+P + +A A+L+++
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 250
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 387 IPDRL--NIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444
IP+R+ + + + AL YL H V+H D+KPSNILLDE + DFGIS G
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGIS---GRL 175
Query: 445 DDSVIQTMTIATIGYMAPEF-----GSEGNVSSKCDVYSYGILLLETFTRKKP 492
D + + YMAPE ++ + + DV+S GI L+E T + P
Sbjct: 176 VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGXVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 280 RTSYLDLERATDGFNE----CNLLGSGGFGSVYKGILSDGT--TVAIKI--------FNL 325
R + L +T GF E +LG G SV + + T A+KI F+
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSA 60
Query: 326 QLEQAFRSFN-SECEVLRNVR-HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNY 383
+ Q R E ++LR V H N+I++ + F LV + M G L +L
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT 120
Query: 384 FQDIPDR--LNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441
+ R + +++V AL H +VH DLKP NILLD++M ++DFG S L
Sbjct: 121 LSEKETRKIMRALLEVICAL------HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 442 GEGDDSVIQTMTIATIGYMAPEF------GSEGNVSSKCDVYSYGILL 483
G+ T Y+APE + + D++S G+++
Sbjct: 175 DPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 298 LLGSGGFGSVYKGILSDGTTVAI---KIFNLQL---EQAFRSFNSECEVLRNVRHRNLIK 351
LG GGF ++ +SD T + KI L + E + R++ H++++
Sbjct: 46 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 103
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ +F +VLE SL + L+ P+ + + L +YLH
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 159
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNV 470
V+H DLK N+ L+E++ + DFG+ +K+ +G+ + + T Y+APE S+
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGH 216
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE-SLPHGLPKIADANLLRE 526
S + DV+S G ++ K P + E L+ E S+P + +A A+L+++
Sbjct: 217 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 272
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 100 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 147
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 148 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 199
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 94 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 193
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 34/228 (14%)
Query: 280 RTSYLDLERATDGFNE----CNLLGSGGFGSVYKGILSDGT--TVAIKIFNL-------- 325
R + L +T GF E +LG G SV + + T A+KI ++
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSA 60
Query: 326 -QLEQAFRSFNSECEVLRNVR-HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNY 383
++++ + E ++LR V H N+I++ + F LV + M G L +L
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT 120
Query: 384 FQDIPDR--LNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441
+ R + +++V AL H +VH DLKP NILLD++M ++DFG S L
Sbjct: 121 LSEKETRKIMRALLEVICAL------HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 442 GEGDDSVIQTMTIATIGYMAPEF------GSEGNVSSKCDVYSYGILL 483
G+ T Y+APE + + D++S G+++
Sbjct: 175 DPGEK---LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 88 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 135
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 136 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 187
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 99 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 146
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 147 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 198
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 94 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 141
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 142 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 193
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 91 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 190
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 95 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEM--TGYVATRWY 194
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 96 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 195
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 95 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 194
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 101 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 148
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 200
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 91 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEM--TGYVATRWY 190
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 101 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 148
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 200
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL VAIK + R F ++ R R L+K+++
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMKVVN- 81
Query: 356 CCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL----------- 404
+ N L+ F P SL+++ + + + L+ +I + L E +
Sbjct: 82 --HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGI 139
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T Y APE
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
D++S G ++ E +F G ++ W K
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 91 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 190
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 87 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 134
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 135 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 186
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 91 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 138
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 139 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 190
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 96/224 (42%), Gaps = 33/224 (14%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL VAIK + R F ++ R R L+K+++
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMKVVN- 81
Query: 356 CCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL----------- 404
+ N L+ F P SL+++ + + + L+ +I + L E +
Sbjct: 82 --HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGI 139
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T Y APE
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEV 196
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
D++S G ++ E +F G ++ W K
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 86 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 133
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 185
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 85 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 184
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 95 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 194
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 298 LLGSGGFGSVYKGILSDGTTVAI---KIFNLQL---EQAFRSFNSECEVLRNVRHRNLIK 351
LG GGF ++ +SD T + KI L + E + R++ H++++
Sbjct: 48 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 105
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ +F +VLE SL + L+ P+ + + L +YLH
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 161
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNV 470
V+H DLK N+ L+E++ + DFG+ +K+ +G+ + + T Y+APE S+
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGH 218
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE-SLPHGLPKIADANLLRE 526
S + DV+S G ++ K P + E L+ E S+P + +A A+L+++
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 274
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 95 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 142
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 143 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 194
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 85 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 184
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 112 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 159
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 211
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 85 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILR 132
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 184
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 86 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 133
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 134 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 185
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 108 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 155
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 156 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 207
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 109 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 156
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 208
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 109 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 156
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 208
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
++ D ++ LGSG F V K S G A K + +A R E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+LR V H N+I + N L+LE + G L +L + + + + +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE-EEATSFIKQILD 126
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENM-VAHVS--DFGISKLLGEGDDSVIQTMTIA 455
+ YLH + + H DLKP NI LLD+N+ + H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 108 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 155
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 156 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 207
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 113/237 (47%), Gaps = 18/237 (7%)
Query: 298 LLGSGGFGSVYKGILSDGTTVAI---KIF--NLQLEQAFRS-FNSECEVLRNVRHRNLIK 351
LG GGF ++ +SD T + KI +L L+ R + E + R++ H++++
Sbjct: 22 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVG 79
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ +F +VLE SL + L+ P+ + + L +YLH
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR--- 135
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNV 470
V+H DLK N+ L+E++ + DFG+ +K+ +G+ + + T Y+APE S+
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGH 192
Query: 471 SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE-SLPHGLPKIADANLLRE 526
S + DV+S G ++ K P + E L+ E S+P + +A A+L+++
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 248
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 101 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 148
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 149 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 200
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 299 LGSGGFGSVYKGILSDGTTV-AIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILSSC 356
LG G F K + A+KI + ++E + E L+ H N++K+
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEA---NTQKEITALKLCEGHPNIVKLHEVF 75
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCD 416
+ LV+E + G L + + +F + + IM + A+ H H VVH D
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVS---HMHDVGVVHRD 131
Query: 417 LKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSK 473
LKP N+L ++N+ + DFG ++L D+ ++T T+ Y APE ++
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFARL-KPPDNQPLKTPCF-TLHYAAPELLNQNGYDES 189
Query: 474 CDVYSYGILLLETFTRKKP 492
CD++S G++L + + P
Sbjct: 190 CDLWSLGVILYTMLSGQVP 208
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 385 QDIPDRL--NIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442
Q IP+ + I + + ALE+LH S V+H D+KPSN+L++ DFGIS L
Sbjct: 131 QTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLV 188
Query: 443 EGDDSVIQTMTIATIGYMAPE-FGSEGN---VSSKCDVYSYGILLLETFTRKKPTDEMFT 498
D V + + Y APE E N S K D++S GI +E + P D T
Sbjct: 189 ---DDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGT 245
Query: 499 GEMNLKNWVKESLPH 513
LK V+E P
Sbjct: 246 PFQQLKQVVEEPSPQ 260
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 22/202 (10%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTT---VAIKIFNLQLEQAFRSFNS----ECEVLRNVR 345
+ LGSG +G V + D T AIKI ++ S NS E VL+ +
Sbjct: 39 YQRVKKLGSGAYGEVL--LCRDKVTHVERAIKI--IRKTSVSTSSNSKLLEEVAVLKLLD 94
Query: 346 HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
H N++K+ + LV+E G L + F ++ D I+ V + YLH
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEV-DAAVIIKQVLSGVTYLH 153
Query: 406 HGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
+ +VH DLKP N+LL +++ + + DFG+S + ++ + T Y+AP
Sbjct: 154 KHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYIAP 207
Query: 463 EFGSEGNVSSKCDVYSYGILLL 484
E + KCDV+S G++L
Sbjct: 208 EVLRK-KYDEKCDVWSIGVILF 228
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 337 ECEVLRNVR-HRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDR--LNI 393
E ++LR V H N+I++ + F LV + M G L +L + R +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
+++V AL H +VH DLKP NILLD++M ++DFG S L G+
Sbjct: 120 LLEVICAL------HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK---LREV 170
Query: 454 IATIGYMAPEF------GSEGNVSSKCDVYSYGILL 483
T Y+APE + + D++S G+++
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 206
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 23/254 (9%)
Query: 262 RSTKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSD--GTTVA 319
+ TK+P+++ +++ + D + TD FN +LG G FG V +LS+ GT
Sbjct: 313 QGTKAPEEKTANTISKFDNNGNRDRMKLTD-FNFLMVLGKGSFGKV---MLSERKGTDEL 368
Query: 320 IKIFNLQLEQAFRSFNSEC-----EVLRNVRHRNLIKILSSCCNTNFK-ALVLEFMPNGS 373
+ L+ + + + EC VL + L SC T + V+E++ G
Sbjct: 369 YAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD 428
Query: 374 LDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVS 433
L + F++ P + ++A+ L +L S +++ DLK N++LD ++
Sbjct: 429 LMYHIQQVGRFKE-PHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIA 484
Query: 434 DFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP- 492
DFG+ K D V T Y+APE + D +++G+LL E + P
Sbjct: 485 DFGMCK--ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 542
Query: 493 ----TDEMFTGEMN 502
DE+F M
Sbjct: 543 EGEDEDELFQSIME 556
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 114/279 (40%), Gaps = 54/279 (19%)
Query: 252 VFIFFLRRRNRSTKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSV---Y 308
V + ++ + +KS D + +S+ T + L+R + +GSG G V Y
Sbjct: 28 VDVSYIAKHYNMSKSKVDNQFYSVEVGDST-FTVLKR----YQNLKPIGSGAQGIVCAAY 82
Query: 309 KGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-TNFKALVLE 367
+L N+ +++ R F ++ R R L+K C N N +L+
Sbjct: 83 DAVLDR---------NVAIKKLSRPFQNQTHAKRAYRELVLMK----CVNHKNIISLLNV 129
Query: 368 FMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL-----------HHGHS 409
F P +L++ FQD+ + +M I + L E + H HS
Sbjct: 130 FTPQKTLEE-------FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS 182
Query: 410 TPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGN 469
++H DLKPSNI++ + + DFG+++ G S + T + T Y APE
Sbjct: 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMG 239
Query: 470 VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
D++S G ++ E K +F G + W K
Sbjct: 240 YKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 274
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 108/260 (41%), Gaps = 40/260 (15%)
Query: 264 TKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSV---YKGILSDGTTVAI 320
+KS D + +S+ T + L+R + +GSG G V Y +L VAI
Sbjct: 2 SKSKVDNQFYSVEVGDST-FTVLKR----YQNLKPIGSGAQGIVCAAYDAVLD--RNVAI 54
Query: 321 KIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-TNFKALVLEFMPNGSLDKWLY 379
K + R F ++ R R L+K C N N +L+ F P +L+++
Sbjct: 55 KKLS-------RPFQNQTHAKRAYRELVLMK----CVNHKNIISLLNVFTPQKTLEEFQD 103
Query: 380 SHNYFQDIPDRLNIMIDVALALEYL-----------HHGHSTPVVHCDLKPSNILLDENM 428
+ + + L +I + L E + H HS ++H DLKPSNI++ +
Sbjct: 104 VYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDX 163
Query: 429 VAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ DFG+++ G S + T + T Y APE D++S G ++ E
Sbjct: 164 TLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR 220
Query: 489 RKKPTDEMFTGEMNLKNWVK 508
K +F G + W K
Sbjct: 221 HKI----LFPGRDYIDQWNK 236
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 113/272 (41%), Gaps = 40/272 (14%)
Query: 252 VFIFFLRRRNRSTKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSV---Y 308
V + ++ + +KS D + +S+ T + L+R + +GSG G V Y
Sbjct: 28 VDVSYIAKHYNMSKSKVDNQFYSVEVGDST-FTVLKR----YQNLKPIGSGAQGIVCAAY 82
Query: 309 KGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-TNFKALVLE 367
+L N+ +++ R F ++ R R L+K C N N +L+
Sbjct: 83 DAVLDR---------NVAIKKLSRPFQNQTHAKRAYRELVLMK----CVNHKNIISLLNV 129
Query: 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL-----------HHGHSTPVVHCD 416
F P +L+++ + + + L +I + L E + H HS ++H D
Sbjct: 130 FTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRD 189
Query: 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDV 476
LKPSNI++ + + DFG+++ G S + T + T Y APE D+
Sbjct: 190 LKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDI 246
Query: 477 YSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
+S G ++ E K +F G + W K
Sbjct: 247 WSVGCIMGEMVRHKI----LFPGRDYIDQWNK 274
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 44/262 (16%)
Query: 264 TKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSV---YKGILSDGTTVAI 320
+KS D + +S+ T + L+R + +GSG G V Y +L VAI
Sbjct: 2 SKSKVDNQFYSVEVGDST-FTVLKR----YQNLKPIGSGAQGIVCAAYDAVLD--RNVAI 54
Query: 321 KIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKW 377
K + + A R++ E +++ V H+N+I +L+ F P +L+++
Sbjct: 55 KKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNV------------FTPQKTLEEF 101
Query: 378 LYSHNYFQDIPDRLNIMIDVALALEYL-----------HHGHSTPVVHCDLKPSNILLDE 426
+ + + L +I + L E + H HS ++H DLKPSNI++
Sbjct: 102 QDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 427 NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLET 486
+ + DFG+++ G S + T + T Y APE D++S G ++ E
Sbjct: 162 DXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 487 FTRKKPTDEMFTGEMNLKNWVK 508
K +F G + W K
Sbjct: 219 VRHKI----LFPGRDYIDQWNK 236
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 35/225 (15%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL VAIK + R F ++ R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL---------- 404
C N N L+ F P SL+++ + + + L+ +I + L E +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCG 138
Query: 405 -HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T Y APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPE 195
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
D++S G ++ E +F G ++ W K
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 114/277 (41%), Gaps = 58/277 (20%)
Query: 264 TKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSV---YKGILSDGTTVAI 320
+KS D + +S+ T + L+R + +GSG G V Y +L VAI
Sbjct: 2 SKSKVDNQFYSVEVGDST-FTVLKR----YQNLKPIGSGAQGIVCAAYDAVLD--RNVAI 54
Query: 321 KIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKW 377
K + + A R++ E +++ V H+N+I +L+ F P +L++
Sbjct: 55 KKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNV------------FTPQKTLEE- 100
Query: 378 LYSHNYFQDIPDRLNIM---IDVALALEYLH---------------HGHSTPVVHCDLKP 419
FQD+ + +M + + +E H H HS ++H DLKP
Sbjct: 101 ------FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 420 SNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSY 479
SNI++ + + DFG+++ G S + T + T Y APE D++S
Sbjct: 155 SNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 480 GILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLP 516
G ++ E K +F G + W K G P
Sbjct: 212 GCIMGEMVRHKI----LFPGRDYIDQWNKVIEQLGTP 244
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 54/268 (20%)
Query: 263 STKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSV---YKGILSDGTTVA 319
++KS D + +S+ T + L+R + +GSG G V Y +L VA
Sbjct: 1 ASKSKVDNQFYSVEVGDST-FTVLKR----YQNLKPIGSGAQGIVCAAYDAVLD--RNVA 53
Query: 320 IKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-TNFKALVLEFMPNGSLDKWL 378
IK + R F ++ R R L+K C N N +L+ F P +L++
Sbjct: 54 IKKLS-------RPFQNQTHAKRAYRELVLMK----CVNHKNIISLLNVFTPQKTLEE-- 100
Query: 379 YSHNYFQDIPDRLNIM-------IDVALALEYL-----------HHGHSTPVVHCDLKPS 420
FQD+ + +M I + L E + H HS ++H DLKPS
Sbjct: 101 -----FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 155
Query: 421 NILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYG 480
NI++ + + DFG+++ G S + T + T Y APE D++S G
Sbjct: 156 NIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 481 ILLLETFTRKKPTDEMFTGEMNLKNWVK 508
++ E K +F G + W K
Sbjct: 213 CIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV + G +A+K + + A R++ E +L++++H N+I +L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 117
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 118 V------------FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 165
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 166 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWY 217
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 110/268 (41%), Gaps = 54/268 (20%)
Query: 263 STKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSV---YKGILSDGTTVA 319
++KS D + +S+ T + L+R + +GSG G V Y +L
Sbjct: 2 ASKSKVDNQFYSVEVGDST-FTVLKR----YQNLKPIGSGAQGIVCAAYDAVLDR----- 51
Query: 320 IKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-TNFKALVLEFMPNGSLDKWL 378
N+ +++ R F ++ R R L+K C N N +L+ F P +L++
Sbjct: 52 ----NVAIKKLSRPFQNQTHAKRAYRELVLMK----CVNHKNIISLLNVFTPQKTLEE-- 101
Query: 379 YSHNYFQDIPDRLNIM-------IDVALALEYL-----------HHGHSTPVVHCDLKPS 420
FQD+ + +M I + L E + H HS ++H DLKPS
Sbjct: 102 -----FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPS 156
Query: 421 NILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYG 480
NI++ + + DFG+++ G S + T + T Y APE D++S G
Sbjct: 157 NIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213
Query: 481 ILLLETFTRKKPTDEMFTGEMNLKNWVK 508
++ E K +F G + W K
Sbjct: 214 CIMGEMVRHKI----LFPGRDYIDQWNK 237
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 95/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y +L VAIK + R F ++ R R L+K
Sbjct: 25 IGSGAQGIVCAAYDAVLD--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 71
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM---IDVALALEYLH------ 405
C N N +L+ F P +L++ FQD+ + +M + + +E H
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEE-------FQDVYLVMELMDANLXQVIQMELDHERMSYL 124
Query: 406 ---------HGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 125 LYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVT 181
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E K +F G + W K
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 229
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 29/203 (14%)
Query: 299 LGSGGFGSVYKGI--LSDGTTVAIKIFNLQLEQ-AFRSFNSECEVLRNVRHRNLIKILSS 355
LG G + +VYKG L+D VA+K L+ E+ A + E +L++++H N++ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 356 CCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG----HSTP 411
LV E+ LDK L Y D + +N M +V L L L G H
Sbjct: 69 IHTEKSLTLVFEY-----LDKDL--KQYLDDCGNIIN-MHNVKLFLFQLLRGLAYCHRQK 120
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT----IATIGYMAPE--FG 465
V+H DLKP N+L++E ++DFG+++ I T T + T+ Y P+ G
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARA------KSIPTKTYDNEVVTLWYRPPDILLG 174
Query: 466 SEGNVSSKCDVYSYGILLLETFT 488
S + S++ D++ G + E T
Sbjct: 175 S-TDYSTQIDMWGVGCIFYEMAT 196
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 101
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLN-----------IMID 396
N+I I N +A +E M D +L +H D+ L +
Sbjct: 102 NIIGI-----NDIIRAPTIEQMK----DVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQ 152
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIA 455
+ L+Y+H S V+H DLKPSN+LL+ + DFG++++ + D + T +A
Sbjct: 153 ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 456 TIGYMAPE--FGSEGNVSSKCDVYSYGILLLETFTRK 490
T Y APE S+G S D++S G +L E + +
Sbjct: 210 TRWYRAPEIMLNSKGYTKS-IDIWSVGCILAEMLSNR 245
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 41/216 (18%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRN 348
+ + +GSG +GSV G VA+K + + A R++ E +L++++H N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHEN 82
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIM 394
+I +L F P SL D +L +H D+ D + +
Sbjct: 83 VIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL 130
Query: 395 I-DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
I + L+Y+H S ++H DLKPSN+ ++E+ + DFG+ + DD + T
Sbjct: 131 IYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDEM--TGY 182
Query: 454 IATIGYMAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
+AT Y APE + + + D++S G ++ E T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + D+G+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQA--FRSFNSECEVLRNV 344
R T+ + LG G F V + + + G A I N + A + E + R +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL 404
+H N++++ S L+ + + G L + + + Y+ + D + + + LE +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE-ADASHCIQQI---LEAV 123
Query: 405 HHGHSTPVVHCDLKPSNILLDENM---VAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
H H VVH +LKP N+LL + ++DFG++ + EG+ T GY++
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFA-GTPGYLS 181
Query: 462 PEFGSEGNVSSKCDVYSYGILL 483
PE + D+++ G++L
Sbjct: 182 PEVLRKDPYGKPVDLWACGVIL 203
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFN--LQLEQAFRSFNSECEVLRNVRHRNLIKIL-- 353
+GSG +GSV I G VAIK + Q E + E +L++++H N+I +L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 354 ----SSCCNTNFKALVLEFMPNGSLDKWL---YSHNYFQDIPDRLNIMIDVALALEYLHH 406
SS N LV+ FM L K + +S Q + V L+ L +
Sbjct: 92 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGLKFSEEKIQYL---------VYQMLKGLKY 141
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FG 465
HS VVH DLKP N+ ++E+ + DFG+++ D + T + T Y APE
Sbjct: 142 IHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEM--TGYVVTRWYRAPEVIL 196
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
S + + D++S G ++ E T K
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 94/225 (41%), Gaps = 35/225 (15%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL VAIK + R F ++ R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYL---------- 404
C N N L+ F P SL+++ + + + L+ +I + L E +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCG 138
Query: 405 -HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 463
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T Y APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPE 195
Query: 464 FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
D++S G ++ E +F G ++ W K
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%), Gaps = 15/177 (8%)
Query: 325 LQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSL---DKWLY-- 379
+ ++ + F +E +++ ++++ + N + ++ E+M N S+ D++ +
Sbjct: 81 ISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVL 140
Query: 380 SHNYFQDIPDRL--NIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGI 437
NY IP ++ I+ V + Y+H+ + + H D+KPSNIL+D+N +SDFG
Sbjct: 141 DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGE 198
Query: 438 SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNV--SSKCDVYSYGILLLETFTRKKP 492
S+ + D I+ + T +M PEF S + +K D++S GI L F P
Sbjct: 199 SEYMV---DKKIKG-SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 114/277 (41%), Gaps = 58/277 (20%)
Query: 264 TKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSV---YKGILSDGTTVAI 320
+KS D + +S+ T + L+R + +GSG G V Y +L VAI
Sbjct: 2 SKSKVDNQFYSVEVGDST-FTVLKR----YQNLKPIGSGAQGIVCAAYDAVLD--RNVAI 54
Query: 321 KIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKW 377
K + + A R++ E +++ V H+N+I +L+ F P +L++
Sbjct: 55 KKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNV------------FTPQKTLEE- 100
Query: 378 LYSHNYFQDIPDRLNIM-------IDVALALEYL-----------HHGHSTPVVHCDLKP 419
FQD+ + +M I + L E + H HS ++H DLKP
Sbjct: 101 ------FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKP 154
Query: 420 SNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSY 479
SNI++ + + DFG+++ G S + T + T Y APE D++S
Sbjct: 155 SNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSV 211
Query: 480 GILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLP 516
G ++ E K +F G + W K G P
Sbjct: 212 GCIMGEMVRHKI----LFPGRDYIDQWNKVIEQLGTP 244
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 96 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ + T +AT Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWY 195
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 94/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL VAIK + R F ++ R R L+K
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 72
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N L+ F P SL++ FQD+ + +M I + L E +
Sbjct: 73 CVNHKNIIGLLNVFTPQKSLEE-------FQDVYIVMELMDANLCQVIQMELDHERMSYL 125
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVT 182
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E K +F G + W K
Sbjct: 183 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 230
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFN--LQLEQAFRSFNSECEVLRNVRHRNLIKIL-- 353
+GSG +GSV I G VAIK + Q E + E +L++++H N+I +L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 354 ----SSCCNTNFKALVLEFMPNGSLDKWL---YSHNYFQDIPDRLNIMIDVALALEYLHH 406
SS N LV+ FM L K + +S Q + V L+ L +
Sbjct: 110 FTPASSLRNFYDFYLVMPFM-QTDLQKIMGMEFSEEKIQYL---------VYQMLKGLKY 159
Query: 407 GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-FG 465
HS VVH DLKP N+ ++E+ + DFG+++ D + T + T Y APE
Sbjct: 160 IHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEM--TGYVVTRWYRAPEVIL 214
Query: 466 SEGNVSSKCDVYSYGILLLETFTRK 490
S + + D++S G ++ E T K
Sbjct: 215 SWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 96 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ + T +AT Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWY 195
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 54/267 (20%)
Query: 264 TKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSV---YKGILSDGTTVAI 320
+KS D + +S+ T + L+R + +GSG G V Y +L VAI
Sbjct: 2 SKSKVDNQFYSVEVGDST-FTVLKR----YQNLKPIGSGAQGIVCAAYDAVLD--RNVAI 54
Query: 321 KIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-TNFKALVLEFMPNGSLDKWLY 379
K + R F ++ R R L+K C N N +L+ F P +L++
Sbjct: 55 KKLS-------RPFQNQTHAKRAYRELVLMK----CVNHKNIISLLNVFTPQKTLEE--- 100
Query: 380 SHNYFQDIPDRLNIM-------IDVALALEYL-----------HHGHSTPVVHCDLKPSN 421
FQD+ + +M I + L E + H HS ++H DLKPSN
Sbjct: 101 ----FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 156
Query: 422 ILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGI 481
I++ + + DFG+++ G S + T + T Y APE D++S G
Sbjct: 157 IVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 482 LLLETFTRKKPTDEMFTGEMNLKNWVK 508
++ E K +F G + W K
Sbjct: 214 IMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 54/267 (20%)
Query: 264 TKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSV---YKGILSDGTTVAI 320
+KS D + +S+ T + L+R + +GSG G V Y +L VAI
Sbjct: 1 SKSKVDNQFYSVEVGDST-FTVLKR----YQNLKPIGSGAQGIVCAAYDAVLD--RNVAI 53
Query: 321 KIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-TNFKALVLEFMPNGSLDKWLY 379
K + R F ++ R R L+K C N N +L+ F P +L++
Sbjct: 54 KKLS-------RPFQNQTHAKRAYRELVLMK----CVNHKNIISLLNVFTPQKTLEE--- 99
Query: 380 SHNYFQDIPDRLNIM-------IDVALALEYL-----------HHGHSTPVVHCDLKPSN 421
FQD+ + +M I + L E + H HS ++H DLKPSN
Sbjct: 100 ----FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 155
Query: 422 ILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGI 481
I++ + + DFG+++ G S + T + T Y APE D++S G
Sbjct: 156 IVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 212
Query: 482 LLLETFTRKKPTDEMFTGEMNLKNWVK 508
++ E K +F G + W K
Sbjct: 213 IMGEMVRHKI----LFPGRDYIDQWNK 235
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 94/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL VAIK + R F ++ R R L+K
Sbjct: 37 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 83
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N L+ F P SL++ FQD+ + +M I + L E +
Sbjct: 84 CVNHKNIIGLLNVFTPQKSLEE-------FQDVYIVMELMDANLCQVIQMELDHERMSYL 136
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 137 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVT 193
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E K +F G + W K
Sbjct: 194 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 241
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 54/267 (20%)
Query: 264 TKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSV---YKGILSDGTTVAI 320
+KS D + +S+ T + L+R + +GSG G V Y +L VAI
Sbjct: 3 SKSKVDNQFYSVEVGDST-FTVLKR----YQNLKPIGSGAQGIVCAAYDAVLD--RNVAI 55
Query: 321 KIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-TNFKALVLEFMPNGSLDKWLY 379
K + R F ++ R R L+K C N N +L+ F P +L++
Sbjct: 56 KKLS-------RPFQNQTHAKRAYRELVLMK----CVNHKNIISLLNVFTPQKTLEE--- 101
Query: 380 SHNYFQDIPDRLNIM-------IDVALALEYL-----------HHGHSTPVVHCDLKPSN 421
FQD+ + +M I + L E + H HS ++H DLKPSN
Sbjct: 102 ----FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN 157
Query: 422 ILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGI 481
I++ + + DFG+++ G S + T + T Y APE D++S G
Sbjct: 158 IVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214
Query: 482 LLLETFTRKKPTDEMFTGEMNLKNWVK 508
++ E K +F G + W K
Sbjct: 215 IMGEMVRHKI----LFPGRDYIDQWNK 237
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 96 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 143
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ + T +AT Y
Sbjct: 144 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTGYVATRWY 195
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 26/239 (10%)
Query: 289 ATDGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSEC-----EVLR 342
D F +LG G FG V + + G A+K+ L+ + + + EC +L
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILS 78
Query: 343 NVRHRNLIKILSSCCNTNFKAL-VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL 401
R+ + L C T + V+EF+ G L + F + R ++ AL
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISAL 137
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYM 460
+LH +++ DLK N+LLD ++DFG+ K EG + + T T T Y+
Sbjct: 138 MFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYI 191
Query: 461 APEFGSEGNVSSKCDVYSYGILLLETFTRKKP-----TDEMFTGEMN----LKNWVKES 510
APE E D ++ G+LL E P D++F +N W+ E
Sbjct: 192 APEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHED 250
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 25/210 (11%)
Query: 299 LGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKILSSC 356
+G G +G V+ G G VA+K+F E+A S+ E E+ + V RH N++ +++
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVF-FTTEEA--SWFRETEIYQTVLMRHENILGFIAAD 100
Query: 357 CNTNFKA----LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH----HGH 408
L+ ++ NGSL +L S D L + L +LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTTL--DAKSMLKLAYSSVSGLCHLHTEIFSTQ 158
Query: 409 STPVV-HCDLKPSNILLDENMVAHVSDFGIS-KLLGEGDDSVIQTMT-IATIGYMAPEFG 465
P + H DLK NIL+ +N ++D G++ K + + ++ I T + T YM PE
Sbjct: 159 GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL 218
Query: 466 SEG------NVSSKCDVYSYGILLLETFTR 489
E D+YS+G++L E R
Sbjct: 219 DESLNRNHFQSYIMADMYSFGLILWEVARR 248
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 23/256 (8%)
Query: 258 RRRNRSTKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSD--- 314
R R S K+ D+E + + Y E ++ L G G FG V++ + D
Sbjct: 42 RSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRL-GRGSFGEVHR--MEDKQT 98
Query: 315 GTTVAIKIFNLQLEQAFRSFN-SECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGS 373
G A+K L++ FR+ C L + R ++ + + + + +E + GS
Sbjct: 99 GFQCAVKKVRLEV---FRAEELMACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGS 152
Query: 374 LDKWLYSHNYFQDIPDRLNIMIDVAL-ALEYLHHGHSTPVVHCDLKPSNILL-DENMVAH 431
L + + + DR + AL LEYLH S ++H D+K N+LL + A
Sbjct: 153 LGQLVKEQGCLPE--DRALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAA 207
Query: 432 VSDFGISKLL---GEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ DFG + L G G D + T +MAPE + +K DV+S ++L
Sbjct: 208 LCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 267
Query: 489 RKKPTDEMFTGEMNLK 504
P + F G + LK
Sbjct: 268 GCHPWTQFFRGPLCLK 283
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 109 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 156
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + +AT Y
Sbjct: 157 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXG--XVATRWY 208
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQ-------AFRSFNSECEVLR 342
+ + + +G G +G V+K D G VAIK F L+ E A R E +L+
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALR----EIRMLK 57
Query: 343 NVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402
++H NL+ +L LV E+ + L + Y + +P+ L I L+
Sbjct: 58 QLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSI-TWQTLQ 113
Query: 403 YLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462
++ H +H D+KP NIL+ ++ V + DFG ++LL D +AT Y +P
Sbjct: 114 AVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD--EVATRWYRSP 171
Query: 463 E-FGSEGNVSSKCDVYSYGILLLETFT 488
E + DV++ G + E +
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLS 198
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 94/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL N+ +++ R F ++ R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAILER---------NVAIKKLSRPFQNQTHAKRAYRELVLMK---- 78
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N L+ F P SL++ FQD+ + +M I + L E +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEE-------FQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPEVVT 188
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E +F G ++ W K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 95/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y +L VAIK + R F ++ R R L+K
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 72
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N +L+ F P +L++ FQD+ + +M I + L E +
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEE-------FQDVYLVMELMDANLCQVIQMELDHERMSYL 125
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 182
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E K +F G + W K
Sbjct: 183 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 230
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 95/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y +L VAIK + R F ++ R R L+K
Sbjct: 26 IGSGAQGIVCAAYDAVLD--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 72
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N +L+ F P +L++ FQD+ + +M I + L E +
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEE-------FQDVYLVMELMDANLCQVIQMELDHERMSYL 125
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 126 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 182
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E K +F G + W K
Sbjct: 183 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 230
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--AGFVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--AGFVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 112 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 159
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + +AT Y
Sbjct: 160 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXG--YVATRWY 211
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 95/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y +L N+ +++ R F ++ R R L+K
Sbjct: 25 IGSGAQGIVCAAYDAVLDR---------NVAIKKLSRPFQNQTHAKRAYRELVLMK---- 71
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N +L+ F P +L++ FQD+ + +M I + L E +
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEE-------FQDVYLVMELMDANLCQVIQMELDHERMSYL 124
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 125 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVT 181
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E K +F G + W K
Sbjct: 182 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 229
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 85 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 132
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DFG+++ DD + +AT Y
Sbjct: 133 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--AGFVATRWY 184
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 82 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 197 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 225
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 94/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL N+ +++ R F ++ R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAILER---------NVAIKKLSRPFQNQTHAKRAYRELVLMK---- 78
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N L+ F P SL++ FQD+ + +M I + L E +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEE-------FQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E +F G ++ W K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 19/209 (9%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAFRSFN-SECEVLRNVRHRN 348
+ + +G G +G S Y + + VAIK + Q + E ++L RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEYL 404
+I I N +A +E M + + + L + ++ + + +I + L L
Sbjct: 87 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 463
+ HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 464 --FGSEGNVSSKCDVYSYGILLLETFTRK 490
S+G S D++S G +L E + +
Sbjct: 202 IMLNSKGYTKS-IDIWSVGCILAEMLSNR 229
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 94/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL N+ +++ R F ++ R R L+K
Sbjct: 33 IGSGAQGIVCAAYDAILER---------NVAIKKLSRPFQNQTHAKRAYRELVLMK---- 79
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N L+ F P SL++ FQD+ + +M I + L E +
Sbjct: 80 CVNHKNIIGLLNVFTPQKSLEE-------FQDVYIVMELMDANLCQVIQMELDHERMSYL 132
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 133 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVT 189
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E +F G ++ W K
Sbjct: 190 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 237
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 82 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 197 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 82 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 197 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 94/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL VAIK + R F ++ R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N L+ F P SL++ FQD+ + +M I + L E +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEE-------FQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVT 188
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E +F G ++ W K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 236
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 93/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL VAIK + R F ++ R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N L+ F P SL++ FQD+ + +M I + L E +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEE-------FQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVT 188
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E K +F G + W K
Sbjct: 189 RYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 236
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 28/215 (13%)
Query: 299 LGSGGFGSV-----YKGILSDGT-TVAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLI 350
LG+G FG V Y I SD TVA+K+ R + SE +VL + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLY-SHNYFQDIPDRLNIM--------------- 394
+L +C ++ E+ G L +L + F IM
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 395 -IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
VA + +L S +H DL NILL + + DFG+++ + + V++
Sbjct: 174 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + DV+SYGI L E F+
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 38/173 (21%)
Query: 327 LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL--VLEFMPNG-----------S 373
+EQ ++ E +L+ + H N++K++ + N L V E + G S
Sbjct: 80 IEQVYQ----EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLS 135
Query: 374 LDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVS 433
D+ + YFQD+ +EYLH+ ++H D+KPSN+L+ E+ ++
Sbjct: 136 EDQARF---YFQDL----------IKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIA 179
Query: 434 DFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGN--VSSKC-DVYSYGILL 483
DFG+S +G D+++ T+ T +MAPE SE S K DV++ G+ L
Sbjct: 180 DFGVSNEF-KGSDALLSN-TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 17/217 (7%)
Query: 284 LDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRN 343
L ++ + F +LG G FG V+ T I L+ + + EC ++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEK 69
Query: 344 ------VRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDV 397
H L + + V+E++ G L + S + F D+ ++
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-DLSRATFYAAEI 128
Query: 398 ALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK--LLGEGDDSVIQTMTIA 455
L L++LH S +V+ DLK NILLD++ ++DFG+ K +LG+ +
Sbjct: 129 ILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEF----CG 181
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP 492
T Y+APE + D +S+G+LL E + P
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 28/215 (13%)
Query: 299 LGSGGFGSV-----YKGILSDGT-TVAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLI 350
LG+G FG V Y I SD TVA+K+ R + SE +VL + H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLY-SHNYFQDIPDRLNIM--------------- 394
+L +C ++ E+ G L +L + F IM
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 395 -IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
VA + +L S +H DL NILL + + DFG+++ + + V++
Sbjct: 167 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + DV+SYGI L E F+
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 82 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 197 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 83
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 84 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 199 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 227
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 299 LGSGGFGSVYK----GILSDGTT--VAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLI 350
LG+G FG V + G+ + VA+K+ + + SE +++ ++ +H N++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQ----------------------DIP 388
+L +C + ++ E+ G L +L ++
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 389 DRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448
D L+ VA + +L S +H D+ N+LL VA + DFG+++ + + +
Sbjct: 159 DLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
++ + +MAPE + + + DV+SYGILL E F+
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 89
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 90 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 144
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 145 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 205 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 81
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 82 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 197 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 225
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + FG+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 85
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 86 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 201 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 101
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 102 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 156
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 217 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 245
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 28/215 (13%)
Query: 299 LGSGGFGSV-----YKGILSDGT-TVAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLI 350
LG+G FG V Y I SD TVA+K+ R + SE +VL + H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLY-SHNYFQDIPDRLNIM--------------- 394
+L +C ++ E+ G L +L + F IM
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 395 -IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
VA + +L S +H DL NILL + + DFG+++ + + V++
Sbjct: 169 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + DV+SYGI L E F+
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 28/215 (13%)
Query: 299 LGSGGFGSV-----YKGILSDGT-TVAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLI 350
LG+G FG V Y I SD TVA+K+ R + SE +VL + H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLY-SHNYFQDIPDRLNIM--------------- 394
+L +C ++ E+ G L +L + F IM
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 395 -IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
VA + +L S +H DL NILL + + DFG+++ + + V++
Sbjct: 151 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + DV+SYGI L E F+
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 297 NLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILS 354
LLG G + V + L +G A+KI Q + E E L + ++N+++++
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 355 SCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414
+ LV E + GS+ + +F + + ++ DVA AL++LH + + H
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKHFNE-REASRVVRDVAAALDFLH---TKGIAH 134
Query: 415 CDLKPSNILLDE-NMVAHVS----DFGISKLLGEGDDSVIQ---TMTIATIGYMAPE--- 463
DLKP NIL + V+ V D G L + T + YMAPE
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 464 -FGSEGNVSSK-CDVYSYGILL 483
F + K CD++S G++L
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVL 216
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 91/215 (42%), Gaps = 28/215 (13%)
Query: 299 LGSGGFGSV-----YKGILSDGT-TVAIKIFNLQLEQAFR-SFNSECEVLRNV-RHRNLI 350
LG+G FG V Y I SD TVA+K+ R + SE +VL + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 351 KILSSCCNTNFKALVLEFMPNGSLDKWLY-SHNYFQDIPDRLNIM--------------- 394
+L +C ++ E+ G L +L + F IM
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 395 -IDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
VA + +L S +H DL NILL + + DFG+++ + + V++
Sbjct: 174 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + DV+SYGI L E F+
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 11/214 (5%)
Query: 293 FNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFN----LQLEQAFRSFNSECEVLRNVRHR 347
F+ ++G G FG V ++ A+K+ L+ ++ + +L+NV+H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
L+ + S + VL+++ G L L F + R ++A AL YLH
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH-- 156
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
S +V+ DLKP NILLD ++DFG+ K E + + + T Y+APE +
Sbjct: 157 -SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT--STFCGTPEYLAPEVLHK 213
Query: 468 GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM 501
D + G +L E P T EM
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEM 247
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 17/203 (8%)
Query: 298 LLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRN------VRHRNLIK 351
+LG G FG V+ T I L+ + + EC ++ H L
Sbjct: 24 MLGKGSFGKVFLAEFK-KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 352 ILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP 411
+ + V+E++ G L + S + F D+ ++ L L++LH S
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-DLSRATFYAAEIILGLQFLH---SKG 138
Query: 412 VVHCDLKPSNILLDENMVAHVSDFGISK--LLGEGDDSVIQTMTIATIGYMAPEFGSEGN 469
+V+ DLK NILLD++ ++DFG+ K +LG+ + T Y+APE
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF----CGTPDYIAPEILLGQK 194
Query: 470 VSSKCDVYSYGILLLETFTRKKP 492
+ D +S+G+LL E + P
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 84/205 (40%), Gaps = 11/205 (5%)
Query: 305 GSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCN--TN 360
G ++KG G + +K+ ++ + R FN EC LR H N++ +L +C +
Sbjct: 24 GELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 361 FKALVLEFMPNGSLDKWLYS-HNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKP 419
L+ + P GSL L+ N+ D + +D A +LH H L
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNS 141
Query: 420 SNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSY 479
++ +DE+ A +S + S + A + A + E D +S+
Sbjct: 142 RSVXIDEDXTARISXADVKFSF----QSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSF 197
Query: 480 GILLLETFTRKKPTDEMFTGEMNLK 504
+LL E TR+ P ++ E+ K
Sbjct: 198 AVLLWELVTREVPFADLSNXEIGXK 222
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHE 83
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 84 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 199 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 227
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + D G+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 93/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL VAIK + R F ++ R R L+K
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 78
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N L+ F P SL++ FQD+ + +M I + L E +
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEE-------FQDVYIVMELMDANLCQVIQMELDHERMSYL 131
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVT 188
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E K +F G + W K
Sbjct: 189 RYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 236
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 79
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 80 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 135 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 195 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 79
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 80 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 135 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 195 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 223
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 86
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 87 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 142 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 202 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 87
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 88 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 142
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 143 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 203 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 78
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 79 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 133
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 134 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 194 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 222
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 90/212 (42%), Gaps = 28/212 (13%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D + LGSG F V K G A K + + R E
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+LR +RH N+I + N L+LE + G L F + ++ ++ D A
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGEL---------FDFLAEKESLTEDEAT 118
Query: 400 A-----LEYLHHGHSTPVVHCDLKPSNI-LLDENM---VAHVSDFGISKLLGEGDDSVIQ 450
L+ +H+ HS + H DLKP NI LLD+N+ + DFGI+ + G++
Sbjct: 119 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF--- 175
Query: 451 TMTIATIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 85
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 86 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 201 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 229
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + DF +++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-- 344
R T F+E +GSG FGSV+K + DG AIK L + N+ EV +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 345 -RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH----NYFQDIPDRLNIMIDVAL 399
+H ++++ S+ + + E+ GSL + + +YF++ + ++++ V
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKE-AELKDLLLQVGR 122
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMV 429
L Y+H S +VH D+KPSNI + +
Sbjct: 123 GLRYIH---SMSLVHMDIKPSNIFISRTSI 149
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-- 344
R T F+E +GSG FGSV+K + DG AIK L + N+ EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 345 -RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH----NYFQDIPDRLNIMIDVAL 399
+H ++++ S+ + + E+ GSL + + +YF++ + ++++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKE-AELKDLLLQVGR 124
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMV 429
L Y+H S +VH D+KPSNI + +
Sbjct: 125 GLRYIH---SMSLVHMDIKPSNIFISRTSI 151
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-- 344
R T F+E +GSG FGSV+K + DG AIK L + N+ EV +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 345 -RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH----NYFQDIPDRLNIMIDVAL 399
+H ++++ S+ + + E+ GSL + + +YF++ + ++++ V
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKE-AELKDLLLQVGR 126
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMV 429
L Y+H S +VH D+KPSNI + +
Sbjct: 127 GLRYIH---SMSLVHMDIKPSNIFISRTSI 153
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + D G+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 12/150 (8%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-- 344
R T F+E +GSG FGSV+K + DG AIK L + N+ EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 345 -RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH----NYFQDIPDRLNIMIDVAL 399
+H ++++ S+ + + E+ GSL + + +YF++ + ++++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKE-AELKDLLLQVGR 124
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMV 429
L Y+H S +VH D+KPSNI + +
Sbjct: 125 GLRYIH---SMSLVHMDIKPSNIFISRTSI 151
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHE 83
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 84 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 199 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 227
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILS 354
+GSG +GSV G VA+K + + A R++ E +L++++H N+I +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 355 SCCNTNFKALVLEFMPNGSL----DKWLYSHNYFQDI----------PDRLNIMI-DVAL 399
F P SL D +L +H D+ D + +I +
Sbjct: 89 V------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR 136
Query: 400 ALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGY 459
L+Y+H S ++H DLKPSN+ ++E+ + D G+++ DD + T +AT Y
Sbjct: 137 GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEM--TGYVATRWY 188
Query: 460 MAPEFG-SEGNVSSKCDVYSYGILLLETFT 488
APE + + + D++S G ++ E T
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 19/209 (9%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAI-KIFNLQLEQAFRSFNSECEVLRNVRHRN 348
+ + +G G +G S Y + + VAI KI + + + E ++L RH N
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEYL 404
+I I N +A +E M + + + L + ++ + + +I + L L
Sbjct: 87 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 405 HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 463
+ HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 464 --FGSEGNVSSKCDVYSYGILLLETFTRK 490
S+G S D++S G +L E + +
Sbjct: 202 IMLNSKGYTKS-IDIWSVGCILAEMLSNR 229
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 43/213 (20%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKI 352
+GSG +GSV Y L VA+K + + A R++ E +L++++H N+I +
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDI---PDRLNIMIDVALALEY------ 403
L F P S++ +S Y D NI+ AL+ E+
Sbjct: 93 LDV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVY 138
Query: 404 -----LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG 458
L + HS ++H DLKPSN+ ++E+ + DFG+++ + D+ + T +AT
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRW 193
Query: 459 YMAPEFG-SEGNVSSKCDVYSYGILLLETFTRK 490
Y APE + + + D++S G ++ E K
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 298 LLGSGGFGSVYKGILSDGTTVAIK-IFNLQ--------LEQAF--RSFNSECEVLRNVRH 346
+ SG +G+V G+ S+G VAIK +FN L +F + E +L + H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 347 RNLIKILSSCCNTNFKA-----LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL 401
N++ + + A LV E M L + ++ M + L L
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
LH VVH DL P NILL +N + DF +++ E +T + Y A
Sbjct: 148 HVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRA 201
Query: 462 PEFGSEGNVSSK-CDVYSYGILLLETFTRKKPTDEMFTGEM--NLKNWVKESLPHGLPKI 518
PE + +K D++S G ++ E F RK +F G N N + E + G PKI
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKA----LFRGSTFYNQLNKIVEVV--GTPKI 255
Query: 519 ADA 521
D
Sbjct: 256 EDV 258
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 91/208 (43%), Gaps = 28/208 (13%)
Query: 291 DGFNECNLLGSGGFGSVYK-GILSDGTTVAIK-IFNLQLEQAFR-----SFNSECEVLRN 343
D + LGSG F V K G A K I +L + R E +LR
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 344 VRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA--- 400
+RH N+I + N L+LE + G L F + ++ ++ D A
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGEL---------FDFLAEKESLTEDEATQFLK 115
Query: 401 --LEYLHHGHSTPVVHCDLKPSNI-LLDENM---VAHVSDFGISKLLGEGDDSVIQTMTI 454
L+ +H+ HS + H DLKP NI LLD+N+ + DFGI+ + G++
Sbjct: 116 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIF 172
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVI 200
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 93/232 (40%), Gaps = 49/232 (21%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS 355
+GSG G V Y IL VAIK + R F ++ R R L+K
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKKLS-------RPFQNQTHAKRAYRELVLMK---- 80
Query: 356 CCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL--- 404
C N N L+ F P SL++ FQD+ + +M I + L E +
Sbjct: 81 CVNHKNIIGLLNVFTPQKSLEE-------FQDVYIVMELMDANLCQVIQMELDHERMSYL 133
Query: 405 --------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
H HS ++H DLKPSNI++ + + DFG+++ G S + + T
Sbjct: 134 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMVPFVVT 190
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
Y APE D++S G ++ E +F G ++ W K
Sbjct: 191 RYYRAPEVILGMGYKENVDIWSVGCIMGEMIK----GGVLFPGTDHIDQWNK 238
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 298 LLGSGGFGSVYKGILSDGTTVAIK-IFNLQ--------LEQAF--RSFNSECEVLRNVRH 346
+ SG +G+V G+ S+G VAIK +FN L +F + E +L + H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 347 RNLIKILSSCCNTNFKA-----LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALAL 401
N++ + + A LV E M L + ++ M + L L
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 461
LH VVH DL P NILL +N + DF +++ E +T + Y A
Sbjct: 148 HVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRA 201
Query: 462 PEFGSEGNVSSK-CDVYSYGILLLETFTRKKPTDEMFTGEM--NLKNWVKESLPHGLPKI 518
PE + +K D++S G ++ E F RK +F G N N + E + G PKI
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKA----LFRGSTFYNQLNKIVEVV--GTPKI 255
Query: 519 ADA 521
D
Sbjct: 256 EDV 258
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 85
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIP----DRLNIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + +I + L
Sbjct: 86 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRG 140
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + T +AT Y AP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 201 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 229
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 48/243 (19%)
Query: 299 LGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKI----- 352
LG GG G V+ + +D VAIK L Q+ + E +++R + H N++K+
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 353 ---------LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEY 403
+ S N +V E+M L L ++ RL M + L+Y
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPLLEE-HARL-FMYQLLRGLKY 135
Query: 404 LHHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKL----------LGEGDDSVIQTM 452
+H S V+H DLKP+N+ ++ E++V + DFG++++ L EG
Sbjct: 136 IH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEG-------- 184
Query: 453 TIATIGYMAPE-FGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTG--EMNLKNWVKE 509
+ T Y +P S N + D+++ G + E T K +F G E+ + E
Sbjct: 185 -LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT----LFAGAHELEQMQLILE 239
Query: 510 SLP 512
S+P
Sbjct: 240 SIP 242
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 23/256 (8%)
Query: 258 RRRNRSTKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSD--- 314
R R S K+ D+E + + Y E ++ L G G FG V++ + D
Sbjct: 61 RSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLRL-GRGSFGEVHR--MEDKQT 117
Query: 315 GTTVAIKIFNLQLEQAFRSFN-SECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGS 373
G A+K L++ FR+ C L + R ++ + + + + +E + GS
Sbjct: 118 GFQCAVKKVRLEV---FRAEELMACAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGS 171
Query: 374 LDKWLYSHNYFQDIPDRLNIMIDVAL-ALEYLHHGHSTPVVHCDLKPSNILL-DENMVAH 431
L + + + DR + AL LEYLH S ++H D+K N+LL + A
Sbjct: 172 LGQLVKEQGCLPE--DRALYYLGQALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAA 226
Query: 432 VSDFGISKLL---GEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ DFG + L G G + T +MAPE + +K DV+S ++L
Sbjct: 227 LCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLN 286
Query: 489 RKKPTDEMFTGEMNLK 504
P + F G + LK
Sbjct: 287 GCHPWTQFFRGPLCLK 302
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 291 DGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECEVLRN 343
D + LGSG F V K G A K + + R E +LR
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 344 VRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA--- 400
+RH N+I + N L+LE + G L F + ++ ++ D A
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGEL---------FDFLAEKESLTEDEATQFLK 136
Query: 401 --LEYLHHGHSTPVVHCDLKPSNI-LLDENM---VAHVSDFGISKLLGEGDDSVIQTMTI 454
L+ +H+ HS + H DLKP NI LLD+N+ + DFGI+ + G++
Sbjct: 137 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIF 193
Query: 455 ATIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVI 221
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 35/224 (15%)
Query: 299 LGSGGFGSV--YKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG GGF V +G L DG A+K +Q E ++ R H N++++++ C
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 357 CN----TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLN---------IMIDVALALEY 403
+ L+L F G+L W N + + D+ N +++ + LE
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTL--W----NEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTI-------AT 456
+H + H DLKP+NILL + + D G + Q +T+ T
Sbjct: 150 IH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 457 IGYMAPEF---GSEGNVSSKCDVYSYGILLLETFTRKKPTDEMF 497
I Y APE S + + DV+S G +L + P D +F
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 43/213 (20%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKI 352
+GSG +GSV Y L VA+K + + A R++ E +L++++H N+I +
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 84
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDI---PDRLNIMIDVALALEY------ 403
L F P S++ +S Y D NI+ AL+ E+
Sbjct: 85 LDV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY 130
Query: 404 -----LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG 458
L + HS ++H DLKPSN+ ++E+ + DFG+++ + D+ + T +AT
Sbjct: 131 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEM--TGYVATRW 185
Query: 459 YMAPEFG-SEGNVSSKCDVYSYGILLLETFTRK 490
Y APE + + + D++S G ++ E K
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 85
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 86 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + +AT Y AP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 201 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 293 FNECNLLGSGGFG---SVYKGILSDGTTVAIKIFNLQLEQAF--RSFNSECEVLRNVRHR 347
+ + +G G +G S Y + + VAIK + Q + R+ E ++L RH
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHE 86
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRL----NIMIDVALALEY 403
N+I I N +A +E M + + + L + ++ + + +I + L
Sbjct: 87 NIIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAP 462
L + HS V+H DLKPSN+LL+ + DFG++++ + D + +AT Y AP
Sbjct: 142 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 463 E--FGSEGNVSSKCDVYSYGILLLETFTRK 490
E S+G S D++S G +L E + +
Sbjct: 202 EIMLNSKGYTKS-IDIWSVGCILAEMLSNR 230
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 200 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 202 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 23/231 (9%)
Query: 285 DLERATDGFNECNLLGSGGFGSVYKGILSD--GTTVAIKIFNLQLEQAFRSFNSEC---- 338
D + TD FN +LG G FG V +LS+ GT + L+ + + + EC
Sbjct: 15 DRMKLTD-FNFLMVLGKGSFGKV---MLSERKGTDELYAVKILKKDVVIQDDDVECTMVE 70
Query: 339 -EVLRNVRHRNLIKILSSCCNTNFK-ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMID 396
VL + L SC T + V+E++ G L + F++ P + +
Sbjct: 71 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKE-PHAVFYAAE 129
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
+A+ L +L S +++ DLK N++LD ++DFG+ K D V T
Sbjct: 130 IAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGT 184
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP-----TDEMFTGEMN 502
Y+APE + D +++G+LL E + P DE+F M
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME 235
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 207 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 180 TPAFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 397 VALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIAT 456
VA +E+L S +H DL NILL E V + DFG+++ + + D V +
Sbjct: 209 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 457 IGYMAPEFGSEGNVSSKCDVYSYGILLLETFT 488
+ +MAPE + + + DV+S+G+LL E F+
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 93/224 (41%), Gaps = 44/224 (19%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR----------HR 347
LG G +G V+K I G VA+K + F +F + + R R H
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVK-------KIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 348 NLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
N++ +L+ N + + L F + + N + + + ++ + ++YLH G
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY-VVYQLIKVIKYLHSG 128
Query: 408 HSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE-------------------GDDSV 448
++H D+KPSNILL+ V+DFG+S+ DD
Sbjct: 129 ---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 449 IQTMTIATIGYMAPE--FGSEGNVSSKCDVYSYGILLLETFTRK 490
I T +AT Y APE GS + D++S G +L E K
Sbjct: 186 ILTDYVATRWYRAPEILLGS-TKYTKGIDMWSLGCILGEILCGK 228
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 43/213 (20%)
Query: 299 LGSGGFGSV---YKGILSDGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKI 352
+GSG +GSV Y L VA+K + + A R++ E +L++++H N+I +
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDI---PDRLNIMIDVALALEY------ 403
L F P S++ +S Y D NI+ AL+ E+
Sbjct: 93 LDV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY 138
Query: 404 -----LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIG 458
L + HS ++H DLKPSN+ ++E+ + DFG+++ + D+ + T +AT
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRW 193
Query: 459 YMAPEFG-SEGNVSSKCDVYSYGILLLETFTRK 490
Y APE + + + D++S G ++ E K
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 98/248 (39%), Gaps = 47/248 (18%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKI-----FNLQLEQAFRSFNSECEVLRNV 344
D + C ++G G F V + I + G A+KI F + E + +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSL---------DKWLYSH----NYFQDIPDRL 391
+H +++++L + + +V EFM L ++YS +Y + I
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI---- 141
Query: 392 NIMIDVALALEYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSV 448
LE L + H ++H D+KP +LL + + + FG++ LGE +
Sbjct: 142 ---------LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--SGL 190
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP----TDEMFTG----- 499
+ + T +MAPE DV+ G++L + P + +F G
Sbjct: 191 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGK 250
Query: 500 -EMNLKNW 506
+MN + W
Sbjct: 251 YKMNPRQW 258
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 98/248 (39%), Gaps = 47/248 (18%)
Query: 291 DGFNECNLLGSGGFGSVYKGILSD-GTTVAIKI-----FNLQLEQAFRSFNSECEVLRNV 344
D + C ++G G F V + I + G A+KI F + E + +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSL---------DKWLYSH----NYFQDIPDRL 391
+H +++++L + + +V EFM L ++YS +Y + I
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI---- 139
Query: 392 NIMIDVALALEYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEGDDSV 448
LE L + H ++H D+KP +LL + + + FG++ LGE +
Sbjct: 140 ---------LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES--GL 188
Query: 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP----TDEMFTG----- 499
+ + T +MAPE DV+ G++L + P + +F G
Sbjct: 189 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGK 248
Query: 500 -EMNLKNW 506
+MN + W
Sbjct: 249 YKMNPRQW 256
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 299 LGSGGFGSVYKGILSDG-TTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSS 355
+G G +G+V+K + VA+K L E S E +L+ ++H+N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 356 CCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
+ LV EF + L K+ S N D + + + L+ L HS V+H
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQL---LKGLGFCHSRNVLHR 125
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FGSEGNVSSK 473
DLKP N+L++ N ++DFG+++ G + + T+ Y P+ FG++ S+
Sbjct: 126 DLKPQNLLINRNGELKLADFGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGAKL-YSTS 182
Query: 474 CDVYSYGILLLETFTRKKPTDEMFTG 499
D++S G + E +P +F G
Sbjct: 183 IDMWSAGCIFAELANAARP---LFPG 205
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 17/246 (6%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILSDGTT-------VAIKIFNLQLEQAFRSFNSECEV 340
R + LG GGF Y+ ++D T V K L+ Q ++E +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQK-EKMSTEIAI 95
Query: 341 LRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA 400
+++ + +++ + +F +VLE SL + L+ P+ M
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 154
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 460
++YLH+ V+H DLK N+ L+++M + DFG++ + E D +T+ T Y+
Sbjct: 155 VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKTLC-GTPNYI 209
Query: 461 APEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE-SLPHGLPKIA 519
APE + S + D++S G +L K P + E ++ E S+P + +A
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 269
Query: 520 DANLLR 525
A + R
Sbjct: 270 SALIRR 275
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 124
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 125 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 178
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 124
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 125 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 178
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVI 205
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 71
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 187
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 237
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 104/266 (39%), Gaps = 55/266 (20%)
Query: 298 LLGSGGFGSVYKG-ILSDGTTVAIKIF--NLQLEQAFRSFNSEC--------EVLRNVRH 346
LLG GGFG+V+ G L+D VAIK+ N L + S + C +V H
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 347 RNLIKILSSCCNTNFKALVLEF-MPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLH 405
+I++L LVLE +P L ++ + P R VA +
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA----IQ 153
Query: 406 HGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H HS VVH D+K NIL+D A + DFG LL + + + Y PE+
Sbjct: 154 HCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRV----YSPPEW 209
Query: 465 GSEGNVSS-KCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523
S + V+S GILL +M G++ + D +
Sbjct: 210 ISRHQYHALPATVWSLGILLY----------DMVCGDIPFER--------------DQEI 245
Query: 524 LREENFFSARMDCLLSIFHLALDCCA 549
L E F A H++ DCCA
Sbjct: 246 LEAELHFPA---------HVSPDCCA 262
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 99
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 215
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 265
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 87
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 203
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 253
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 86
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 202
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 252
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 114
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 230
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 280
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 106
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 222
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 223 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 272
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 87
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 203
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH 253
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 99
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 215
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH 265
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 396 DVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIA 455
D LAL +LH S +VH D+KP+NI L + DFG+ LG +Q
Sbjct: 165 DTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---G 218
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGILLLET 486
YMAPE +G+ + DV+S G+ +LE
Sbjct: 219 DPRYMAPEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 86
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 202
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 203 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH 252
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 114
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 230
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH 280
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 87
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 203
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 204 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH 253
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 100
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 216
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH 266
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 72
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 188
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 238
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 100
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 216
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH 266
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 106/241 (43%), Gaps = 44/241 (18%)
Query: 264 TKSPDDEELFSLATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIF 323
+KS D + +S+ +++ L+R + + +GSG +GI+ + I
Sbjct: 2 SKSKVDNQFYSVEV-ADSTFTVLKR----YQQLKPIGSGA-----QGIVCAAFDTVLGI- 50
Query: 324 NLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-TNFKALVLEFMPNGSLDKWLYSHN 382
N+ +++ R F ++ R R L+K C N N +L+ F P +L++
Sbjct: 51 NVAVKKLSRPFQNQTHAKRAYRELVLLK----CVNHKNIISLLNVFTPQKTLEE------ 100
Query: 383 YFQDIPDRLNIM-------IDVALALEYL-----------HHGHSTPVVHCDLKPSNILL 424
FQD+ + +M I + L E + H HS ++H DLKPSNI++
Sbjct: 101 -FQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 425 DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLL 484
+ + DFG+++ + + T + T Y APE ++ D++S G ++
Sbjct: 160 KSDCTLKILDFGLART---ACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMG 216
Query: 485 E 485
E
Sbjct: 217 E 217
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 119
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 120 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 180 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 235
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 236 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH 285
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 71
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 187
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 188 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 237
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 88/207 (42%), Gaps = 18/207 (8%)
Query: 287 ERATDGFNECNLLGSGGFGSVYK-GILSDGTTVAIKIFNLQLEQAFR------SFNSECE 339
E D ++ LGSG F V K S G A K + ++ R E
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 340 VLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVAL 399
+L+ ++H N+I + N L+LE + G L +L + + + +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQILN 125
Query: 400 ALEYLHHGHSTPVVHCDLKPSNI-LLDENMVA---HVSDFGISKLLGEGDDSVIQTMTIA 455
+ YLH S + H DLKP NI LLD N+ + DFG++ + G++
Sbjct: 126 GVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFG 179
Query: 456 TIGYMAPEFGSEGNVSSKCDVYSYGIL 482
T ++APE + + + D++S G++
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVI 206
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 72
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 188
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 100
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 216
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQH 266
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 99
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 215
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH 265
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 72
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 188
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 189 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 238
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 70
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 71 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 131 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 186
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 187 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 236
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 67
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 183
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQH 233
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 99
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 215
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 216 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQH 265
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 19/247 (7%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILSDGTT-------VAIKIFNLQLEQAFRSFNSECEV 340
R + LG GGF Y+ ++D T V K L+ Q ++E +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQK-EKMSTEIAI 95
Query: 341 LRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA 400
+++ + +++ + +F +VLE SL + L+ P+ M
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 154
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGI-SKLLGEGDDSVIQTMTIATIGY 459
++YLH+ V+H DLK N+ L+++M + DFG+ +K+ +G+ + T Y
Sbjct: 155 VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNY 208
Query: 460 MAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE-SLPHGLPKI 518
+APE + S + D++S G +L K P + E ++ E S+P + +
Sbjct: 209 IAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV 268
Query: 519 ADANLLR 525
A A + R
Sbjct: 269 ASALIRR 275
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 100
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 216
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 217 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQH 266
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 94
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 95 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 154
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 155 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 210
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 211 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH 260
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 67
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 128 NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 183
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQH 233
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 43/235 (18%)
Query: 293 FNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKI 352
+ + +GSG +GI+ + I N+ +++ R F ++ R R L+K
Sbjct: 24 YQQLKPIGSGA-----QGIVCAAFDTVLGI-NVAVKKLSRPFQNQTHAKRAYRELVLLK- 76
Query: 353 LSSCCN-TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIM-------IDVALALEYL 404
C N N +L+ F P +L++ FQD+ + +M I + L E +
Sbjct: 77 ---CVNHKNIISLLNVFTPQKTLEE-------FQDVYLVMELMDANLCQVIHMELDHERM 126
Query: 405 -----------HHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT 453
H HS ++H DLKPSNI++ + + DFG+++ + + T
Sbjct: 127 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---ASTNFMMTPY 183
Query: 454 IATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
+ T Y APE D++S G ++ E +F G ++ W K
Sbjct: 184 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK----GSVIFQGTDHIDQWNK 234
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 21/230 (9%)
Query: 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LLGSGGFGSVY GI +SD VAIK + + V V L+K +SS
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 67
Query: 357 CNTNFKALVLEFMPNG---SLDKWLYSHNYFQDIPDRLNIMIDVALA-----LEYLHHGH 408
+ + L P+ L++ + F I +R + ++A + LE + H H
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 409 STPVVHCDLKPSNILLDENMVA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE 467
+ V+H D+K NIL+D N + DFG LL + + T T Y PE+
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYTDFDGTRVYSPPEWIRY 183
Query: 468 GNVSSK-CDVYSYGILLLETFTRKKP---TDEMFTGEMNLKNWVKESLPH 513
+ V+S GILL + P +E+ G++ + V H
Sbjct: 184 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQH 233
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQ-TMTIATIGYMAPEFGSEGNVS 471
H D+KP NIL+ + A++ DFGI+ D+ + Q T+ T+ Y APE SE + +
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYXAPERFSESHAT 213
Query: 472 SKCDVYSYGILLLETFTRKKP--TDEMFTGEMNLKNWVKE--SLPHGLPKIADANLLR 525
+ D+Y+ +L E T P D++ ++ + ++ G+P DA + R
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPSTVRPGIPVAFDAVIAR 271
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 17/246 (6%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILSDGTT-------VAIKIFNLQLEQAFRSFNSECEV 340
R + LG GGF Y+ ++D T V K L+ Q ++E +
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQK-EKMSTEIAI 79
Query: 341 LRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA 400
+++ + +++ + +F +VLE SL + L+ P+ M
Sbjct: 80 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 138
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 460
++YLH+ V+H DLK N+ L+++M + DFG++ + E D + + T Y+
Sbjct: 139 VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLC-GTPNYI 193
Query: 461 APEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE-SLPHGLPKIA 519
APE + S + D++S G +L K P + E ++ E S+P + +A
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 253
Query: 520 DANLLR 525
A + R
Sbjct: 254 SALIRR 259
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 17/246 (6%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGILSDGTT-------VAIKIFNLQLEQAFRSFNSECEV 340
R + LG GGF Y+ ++D T V K L+ Q ++E +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPHQK-EKMSTEIAI 95
Query: 341 LRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALA 400
+++ + +++ + +F +VLE SL + L+ P+ M
Sbjct: 96 HKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQG 154
Query: 401 LEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 460
++YLH+ V+H DLK N+ L+++M + DFG++ + E D + + T Y+
Sbjct: 155 VQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLC-GTPNYI 209
Query: 461 APEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE-SLPHGLPKIA 519
APE + S + D++S G +L K P + E ++ E S+P + +A
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 269
Query: 520 DANLLR 525
A + R
Sbjct: 270 SALIRR 275
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 299 LGSGGFGSVYKGILSDG-TTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSS 355
+G G +G+V+K + VA+K L E S E +L+ ++H+N++++
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 356 CCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHC 415
+ LV EF + L K+ S N D + + + L+ L HS V+H
Sbjct: 70 LHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQL---LKGLGFCHSRNVLHR 125
Query: 416 DLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--FGSEGNVSSK 473
DLKP N+L++ N +++FG+++ G + + T+ Y P+ FG++ S+
Sbjct: 126 DLKPQNLLINRNGELKLANFGLARAFGI--PVRCYSAEVVTLWYRPPDVLFGAKL-YSTS 182
Query: 474 CDVYSYGILLLETFTRKKPTDEMFTG 499
D++S G + E +P +F G
Sbjct: 183 IDMWSAGCIFAELANAGRP---LFPG 205
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 371 NGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVA 430
NGS+ + S ++ Q NIM + AL YLH + + H D+KP N L N
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSF 207
Query: 431 HVS--DFGISKLLGEGDDSVIQTMTI--ATIGYMAPEFGSEGNVS--SKCDVYSYGILL 483
+ DFG+SK + ++ MT T ++APE + N S KCD +S G+LL
Sbjct: 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRNVRHRNLIKILSS 355
+G G FG V+K G VA+K ++ E+ + E ++L+ ++H N++ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 356 C---------CNTNFKALVLEFMPN---GSLDKWLYSHNYFQDIPDRLNIMIDVALALEY 403
C C + LV +F + G L L + I + + L
Sbjct: 86 CRTKASPYNRCKASI-YLVFDFCEHDLAGLLSNVLVKFTLSE-------IKRVMQMLLNG 137
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMA 461
L++ H ++H D+K +N+L+ + V ++DFG+++ +S + T+ Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 462 PE-FGSEGNVSSKCDVYSYGILLLETFTR 489
PE E + D++ G ++ E +TR
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 113/275 (41%), Gaps = 50/275 (18%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357
LG G F V + I S G A K L++ R + E+L + ++++ SC
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKF----LKKRRRGQDCRAEILHEIA---VLELAKSCP 89
Query: 358 ----------NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG 407
NT+ L+LE+ G + ++ +++ + LE +++
Sbjct: 90 RVINLHEVYENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYL 147
Query: 408 HSTPVVHCDLKPSNILLDENMV---AHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464
H +VH DLKP NILL + DFG+S+ +G + + T Y+APE
Sbjct: 148 HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTPEYLAPEI 204
Query: 465 GSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524
+ +++ D+++ GI+ T P F GE N + ++ I+ N+
Sbjct: 205 LNYDPITTATDMWNIGIIAYMLLTHTSP----FVGEDNQETYL---------NISQVNVD 251
Query: 525 REENFFSARMDCLLSIFHLALDCCAEL----PDQR 555
E FS S+ LA D L P++R
Sbjct: 252 YSEETFS-------SVSQLATDFIQSLLVKNPEKR 279
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 20/214 (9%)
Query: 292 GFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL---EQAFRSFNSECEVLRNV 344
G + +LL G GS K +L A+K+ +L ++ +E V
Sbjct: 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 66
Query: 345 RHRNLIKILSSCCNTNFKAL-VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMI--DVALAL 401
+ + L SC T + V+E++ G L ++ + +P+ +++LAL
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLAL 123
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL-LGEGDDSVIQTMTIATIGYM 460
YLH +++ DLK N+LLD ++D+G+ K L GD + + T Y+
Sbjct: 124 NYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYI 177
Query: 461 APEFGSEGNVSSKCDVYSYGILLLETFTRKKPTD 494
APE + D ++ G+L+ E + P D
Sbjct: 178 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 22/237 (9%)
Query: 278 WRRTSYLDLERATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNS 336
W S++ D + LG G + V++ I +++ V +KI + +
Sbjct: 24 WDYASHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR--- 80
Query: 337 ECEVLRNVRHRNLIKILSSCCN---TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNI 393
E ++L N+R I L+ + ALV E + N K LY D R
Sbjct: 81 EIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF-KQLYQ--TLTDYDIRF-Y 136
Query: 394 MIDVALALEYLHHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTM 452
M ++ AL+Y H S ++H D+KP N+++D E+ + D+G+++ G + ++
Sbjct: 137 MYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-- 191
Query: 453 TIATIGYMAPEFGSEGNV-SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508
+A+ + PE + + D++S G +L RK+P F G N V+
Sbjct: 192 -VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 12/189 (6%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSC 356
LG G FG V++ + S T K ++ +Q E +L RHRN++ + S
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL--VKKEISILNIARHRNILHLHESF 70
Query: 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCD 416
+ ++ EF+ + + + + + + + ++ + V AL++LH S + H D
Sbjct: 71 ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFD 127
Query: 417 LKPSNILLDENMVAHVS--DFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKC 474
++P NI+ + + +FG ++ L GD+ + Y APE VS+
Sbjct: 128 IRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RLLFTAPEYYAPEVHQHDVVSTAT 184
Query: 475 DVYSYGILL 483
D++S G L+
Sbjct: 185 DMWSLGTLV 193
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 20/214 (9%)
Query: 292 GFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL---EQAFRSFNSECEVLRNV 344
G + +LL G GS K +L A+K+ +L ++ +E V
Sbjct: 3 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 62
Query: 345 RHRNLIKILSSCCNTNFKAL-VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMI--DVALAL 401
+ + L SC T + V+E++ G L ++ + +P+ +++LAL
Sbjct: 63 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLAL 119
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL-LGEGDDSVIQTMTIATIGYM 460
YLH +++ DLK N+LLD ++D+G+ K L GD + + T Y+
Sbjct: 120 NYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYI 173
Query: 461 APEFGSEGNVSSKCDVYSYGILLLETFTRKKPTD 494
APE + D ++ G+L+ E + P D
Sbjct: 174 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 20/214 (9%)
Query: 292 GFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL---EQAFRSFNSECEVLRNV 344
G + +LL G GS K +L A+K+ +L ++ +E V
Sbjct: 18 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQA 77
Query: 345 RHRNLIKILSSCCNTNFKAL-VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMI--DVALAL 401
+ + L SC T + V+E++ G L ++ + +P+ +++LAL
Sbjct: 78 SNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEISLAL 134
Query: 402 EYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL-LGEGDDSVIQTMTIATIGYM 460
YLH +++ DLK N+LLD ++D+G+ K L GD + + T Y+
Sbjct: 135 NYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYI 188
Query: 461 APEFGSEGNVSSKCDVYSYGILLLETFTRKKPTD 494
APE + D ++ G+L+ E + P D
Sbjct: 189 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 25/214 (11%)
Query: 288 RATDGFNECNLLGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-- 344
+ D F + G G FG+V G S G +VAIK ++ Q R N E ++++++
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK----KVIQDPRFRNRELQIMQDLAV 75
Query: 345 -RHRNLIKILSSCCNTN-------FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMID 396
H N++++ S + +V+E++P+ +L + ++ Q P + I +
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVF 134
Query: 397 VALALEYLH--HGHSTPVVHCDLKPSNILLDE-NMVAHVSDFGISKLLGEGDDSVIQTMT 453
+ + + H S V H D+KP N+L++E + + DFG +K L + +V
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV---AY 191
Query: 454 IATIGYMAPE--FGSEGNVSSKCDVYSYGILLLE 485
I + Y APE FG++ + ++ D++S G + E
Sbjct: 192 ICSRYYRAPELIFGNQ-HYTTAVDIWSVGCIFAE 224
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 92/214 (42%), Gaps = 38/214 (17%)
Query: 297 NLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEV------LRNVRHRNLI 350
+LLG G +G V K +L T + L+ ++ R N E V LR +RH+N+I
Sbjct: 11 DLLGEGSYGKV-KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 351 KILSSCCNTNFKAL--VLEFMPNGSLD----------KWLYSHNYFQDIPDRLNIMIDVA 398
+++ N + + V+E+ G + +H YF + D
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLID--------- 120
Query: 399 LALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG--EGDDSVIQTMTIAT 456
LEYLH S +VH D+KP N+LL +S G+++ L DD+ + +
Sbjct: 121 -GLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ--GS 174
Query: 457 IGYMAPEFGSEGNVSS--KCDVYSYGILLLETFT 488
+ PE + + S K D++S G+ L T
Sbjct: 175 PAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITT 208
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 11/139 (7%)
Query: 10 IGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLAS--LTSLRELRLNSNKLTS 67
+ N S+ LKRL +L LQ N L L + ++SL L ++ N L S
Sbjct: 358 LNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS 417
Query: 68 SI--PSALWALEYILYVNLSSNYLTGSLTSDI-QNMKVLIDLDLSRNQLSGDIPKTIAGL 124
+ WA E IL +NLSSN LTGS+ + +KV LDL N++ IPK + L
Sbjct: 418 HAYDRTCAWA-ESILVLNLSSNMLTGSVFRCLPPKVKV---LDLHNNRIMS-IPKDVTHL 472
Query: 125 KDLTNLSLAGNQFQGPIPE 143
+ L L++A NQ + +P+
Sbjct: 473 QALQELNVASNQLKS-VPD 490
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 12/164 (7%)
Query: 47 TCLASLTSLRELRLNSNKLTSSIPSALWALE----YILYVNLSSNYLTGSLTSDIQNMKV 102
C S +S L N T S+ L+ IL N N+ +L + +NM
Sbjct: 347 VCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMT--KNMSS 404
Query: 103 LIDLDLSRNQL-SGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGXXXXXXXXXXXXXXX 161
L LD+S N L S +T A + + L+L+ N G + F
Sbjct: 405 LETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSV---FRCLPPKVKVLDLHNNR 461
Query: 162 XXGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHW 205
IPK + L L++ NV+ N+L+ +P +G F ++ + W
Sbjct: 462 IMSIPKDVTHLQALQELNVASNQLKS-VP-DGVFDRLTSLQYIW 503
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 6 QLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKL 65
+++ + L +N + SIP D+ L+ L L++ N+L LTSL+ + L+ N
Sbjct: 451 KVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPW 509
Query: 66 TSSIPSALWALEYI 79
+ P + E+I
Sbjct: 510 DCTCPGIRYLSEWI 523
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 10 IGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSI 69
+ L+ N L GS+ C ++ L L N++ SIP + L +L+EL + SN+L S+
Sbjct: 433 LNLSSNMLTGSVFR--CLPPKVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQL-KSV 488
Query: 70 PSALW----ALEYI 79
P ++ +L+YI
Sbjct: 489 PDGVFDRLTSLQYI 502
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRNVRHRNLIKILSS 355
+G G FG V+K G VA+K ++ E+ + E ++L+ ++H N++ ++
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 356 C---------CNTNFKALVLEFMPN---GSLDKWLYSHNYFQDIPDRLNIMIDVALALEY 403
C C + LV +F + G L L + I + + L
Sbjct: 85 CRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSE-------IKRVMQMLLNG 136
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMA 461
L++ H ++H D+K +N+L+ + V ++DFG+++ +S + T+ Y
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 462 PE-FGSEGNVSSKCDVYSYGILLLETFTR 489
PE E + D++ G ++ E +TR
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 299 LGSGGFGSVYKGI-LSDGTTVAIKIFNLQLEQAFRSFNS--ECEVLRNVRHRNLIKILSS 355
+G G FG V+K G VA+K ++ E+ + E ++L+ ++H N++ ++
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 356 C---------CNTNFKALVLEFMPN---GSLDKWLYSHNYFQDIPDRLNIMIDVALALEY 403
C C + LV +F + G L L + I + + L
Sbjct: 86 CRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSE-------IKRVMQMLLNG 137
Query: 404 LHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMA 461
L++ H ++H D+K +N+L+ + V ++DFG+++ +S + T+ Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 462 PE-FGSEGNVSSKCDVYSYGILLLETFTR 489
PE E + D++ G ++ E +TR
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTR 226
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,737,430
Number of Sequences: 62578
Number of extensions: 689058
Number of successful extensions: 4491
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 291
Number of HSP's that attempted gapping in prelim test: 1737
Number of HSP's gapped (non-prelim): 1482
length of query: 581
length of database: 14,973,337
effective HSP length: 104
effective length of query: 477
effective length of database: 8,465,225
effective search space: 4037912325
effective search space used: 4037912325
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)