Query 008012
Match_columns 581
No_of_seqs 584 out of 4525
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 15:59:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008012.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008012hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3omv_A RAF proto-oncogene seri 100.0 5.7E-57 2E-61 442.2 18.9 267 286-573 31-303 (307)
2 4asz_A BDNF/NT-3 growth factor 100.0 4.6E-57 1.6E-61 443.1 17.7 260 290-571 12-290 (299)
3 4aoj_A High affinity nerve gro 100.0 2.4E-56 8E-61 444.2 21.4 258 291-570 41-319 (329)
4 4gt4_A Tyrosine-protein kinase 100.0 5.2E-56 1.8E-60 437.5 16.3 256 291-568 26-304 (308)
5 4b9d_A Serine/threonine-protei 100.0 1.7E-55 5.8E-60 437.7 18.0 251 290-564 23-277 (350)
6 4fih_A Serine/threonine-protei 100.0 2.8E-55 9.5E-60 435.5 18.6 250 291-564 74-324 (346)
7 4aw0_A HPDK1, 3-phosphoinositi 100.0 4E-55 1.4E-59 427.8 15.1 250 291-564 32-285 (311)
8 4g3f_A NF-kappa-beta-inducing 100.0 5E-55 1.7E-59 432.4 15.8 259 289-573 56-319 (336)
9 3fpq_A Serine/threonine-protei 100.0 8.3E-54 2.8E-58 416.8 20.4 245 294-564 29-283 (290)
10 4fie_A Serine/threonine-protei 100.0 5E-54 1.7E-58 436.9 19.5 251 290-564 150-401 (423)
11 4ase_A Vascular endothelial gr 100.0 6.3E-54 2.2E-58 430.0 19.1 268 283-571 56-348 (353)
12 3hyh_A Carbon catabolite-derep 100.0 1.5E-53 5.3E-58 411.2 20.6 246 291-564 13-263 (275)
13 3hmm_A TGF-beta receptor type- 100.0 1.8E-52 6.1E-57 413.5 21.9 270 290-571 2-298 (303)
14 3ubd_A Ribosomal protein S6 ki 100.0 2.7E-53 9.4E-58 415.0 10.2 248 291-564 24-282 (304)
15 4g31_A Eukaryotic translation 100.0 1.2E-51 4E-56 405.5 17.3 250 291-564 5-280 (299)
16 4b99_A Mitogen-activated prote 100.0 1.9E-49 6.6E-54 404.5 19.3 268 290-564 53-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.6E-49 5.6E-54 400.9 18.0 271 285-564 15-353 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 4E-48 1.4E-52 414.2 21.5 253 290-564 156-411 (573)
19 3v5w_A G-protein coupled recep 100.0 6.8E-48 2.3E-52 408.9 21.8 249 289-564 187-450 (689)
20 2qkw_B Protein kinase; three-h 100.0 1.1E-46 3.7E-51 377.8 20.2 284 279-570 27-315 (321)
21 3s95_A LIMK-1, LIM domain kina 100.0 2.3E-46 7.8E-51 373.6 19.8 261 290-574 9-286 (310)
22 2psq_A Fibroblast growth facto 100.0 1.1E-45 3.8E-50 377.1 22.2 264 289-574 79-368 (370)
23 3uim_A Brassinosteroid insensi 100.0 6.6E-46 2.3E-50 373.0 19.6 287 275-567 14-308 (326)
24 3fxz_A Serine/threonine-protei 100.0 1E-45 3.5E-50 366.2 19.7 252 289-564 18-270 (297)
25 3soc_A Activin receptor type-2 100.0 1.1E-45 3.6E-50 370.5 16.6 271 286-571 19-319 (322)
26 3p86_A Serine/threonine-protei 100.0 2.8E-45 9.6E-50 364.9 19.5 272 281-577 27-305 (309)
27 3cbl_A C-FES, proto-oncogene t 100.0 5.4E-46 1.9E-50 380.7 14.3 265 286-572 109-376 (377)
28 3kul_A Ephrin type-A receptor 100.0 2.2E-45 7.6E-50 368.5 18.5 265 289-575 47-318 (325)
29 4hcu_A Tyrosine-protein kinase 100.0 3.8E-45 1.3E-49 357.0 18.1 259 289-571 8-267 (269)
30 3ugc_A Tyrosine-protein kinase 100.0 5E-46 1.7E-50 368.4 11.2 275 289-572 8-293 (295)
31 3fe3_A MAP/microtubule affinit 100.0 6.1E-45 2.1E-49 365.0 19.1 251 287-564 11-265 (328)
32 3zgw_A Maternal embryonic leuc 100.0 4.2E-45 1.4E-49 368.1 17.6 255 286-565 5-262 (347)
33 2nru_A Interleukin-1 receptor- 100.0 5.1E-44 1.8E-48 356.0 25.3 282 277-570 11-306 (307)
34 3vhe_A Vascular endothelial gr 100.0 6.4E-45 2.2E-49 370.9 19.0 270 281-571 12-356 (359)
35 3lb7_A RAF proto-oncogene seri 100.0 8.8E-45 3E-49 361.1 19.5 267 286-573 31-303 (307)
36 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.6E-45 1.2E-49 356.9 16.4 260 288-571 5-265 (268)
37 4aw2_A Serine/threonine-protei 100.0 5.6E-45 1.9E-49 377.7 18.7 265 281-564 64-339 (437)
38 1tki_A Titin; serine kinase, m 100.0 8E-45 2.7E-49 363.5 19.1 254 289-565 3-259 (321)
39 3niz_A Rhodanese family protei 100.0 1.5E-44 5.1E-49 360.2 20.3 272 286-564 16-301 (311)
40 1luf_A Muscle-specific tyrosin 100.0 4.9E-45 1.7E-49 369.4 16.8 269 284-574 40-339 (343)
41 3gen_A Tyrosine-protein kinase 100.0 6.6E-45 2.3E-49 358.0 16.8 265 283-571 16-281 (283)
42 3tt0_A Basic fibroblast growth 100.0 1.9E-44 6.4E-49 370.1 20.1 265 287-573 65-355 (382)
43 2ivs_A Proto-oncogene tyrosine 100.0 1.1E-44 3.7E-49 362.1 17.8 265 285-571 17-312 (314)
44 2qol_A Ephrin receptor; recept 100.0 1.4E-44 4.6E-49 369.3 18.3 262 289-572 43-311 (373)
45 3l9p_A Anaplastic lymphoma kin 100.0 6.2E-45 2.1E-49 371.3 15.7 263 290-574 70-349 (367)
46 3tki_A Serine/threonine-protei 100.0 7.5E-45 2.6E-49 364.1 15.6 254 290-564 6-262 (323)
47 1rjb_A FL cytokine receptor; k 100.0 1.9E-44 6.6E-49 365.1 18.6 270 285-575 39-339 (344)
48 1mp8_A Focal adhesion kinase 1 100.0 2.2E-44 7.4E-49 353.9 18.3 264 286-573 10-279 (281)
49 1o6l_A RAC-beta serine/threoni 100.0 5.4E-44 1.8E-48 359.1 21.4 249 290-564 4-261 (337)
50 1t46_A HOMO sapiens V-KIT hard 100.0 3.3E-44 1.1E-48 358.5 19.2 266 286-572 18-309 (313)
51 2c30_A Serine/threonine-protei 100.0 3.6E-44 1.2E-48 359.0 19.3 260 281-564 25-295 (321)
52 2yab_A Death-associated protei 100.0 3E-44 1E-48 364.2 18.9 253 289-564 10-273 (361)
53 3q4u_A Activin receptor type-1 100.0 1.3E-43 4.4E-48 352.1 23.0 267 288-568 5-300 (301)
54 4eqm_A Protein kinase; transfe 100.0 1.8E-44 6E-49 356.8 16.3 264 289-572 9-277 (294)
55 3soa_A Calcium/calmodulin-depe 100.0 9.7E-44 3.3E-48 369.8 22.4 255 288-564 8-268 (444)
56 1kob_A Twitchin; kinase, intra 100.0 6.7E-44 2.3E-48 364.9 20.7 254 289-564 49-305 (387)
57 3og7_A AKAP9-BRAF fusion prote 100.0 2.2E-44 7.5E-49 355.4 16.4 264 285-569 18-287 (289)
58 3poz_A Epidermal growth factor 100.0 4.3E-44 1.5E-48 359.6 18.6 259 290-571 14-279 (327)
59 3qup_A Tyrosine-protein kinase 100.0 2.6E-44 8.8E-49 360.9 16.8 267 284-572 16-300 (323)
60 3c0i_A Peripheral plasma membr 100.0 8.2E-44 2.8E-48 360.9 19.9 253 290-564 23-287 (351)
61 3o0g_A Cell division protein k 100.0 6.9E-44 2.4E-48 352.4 18.6 268 291-564 2-283 (292)
62 2bdw_A Hypothetical protein K1 100.0 1E-43 3.4E-48 361.3 20.2 254 288-564 26-285 (362)
63 2pvf_A Fibroblast growth facto 100.0 1.1E-43 3.6E-48 358.0 20.1 266 287-574 31-322 (334)
64 2i1m_A Macrophage colony-stimu 100.0 7.5E-44 2.6E-48 359.1 18.8 269 285-574 40-330 (333)
65 3mdy_A Bone morphogenetic prot 100.0 8.3E-43 2.8E-47 352.0 26.4 273 282-571 28-332 (337)
66 3t9t_A Tyrosine-protein kinase 100.0 6.4E-44 2.2E-48 347.8 17.6 258 289-570 6-264 (267)
67 1csn_A Casein kinase-1; phosph 100.0 1.8E-43 6.3E-48 350.4 21.1 266 289-574 8-287 (298)
68 4f0f_A Serine/threonine-protei 100.0 1.1E-43 3.8E-48 350.0 19.3 253 289-568 17-287 (287)
69 4euu_A Serine/threonine-protei 100.0 1.6E-43 5.6E-48 354.3 20.7 274 290-569 8-308 (319)
70 2xir_A Vascular endothelial gr 100.0 8.1E-44 2.8E-48 356.1 18.2 272 281-573 17-313 (316)
71 4fr4_A YANK1, serine/threonine 100.0 2.9E-43 9.9E-48 358.9 22.6 250 289-564 13-272 (384)
72 3txo_A PKC-L, NPKC-ETA, protei 100.0 5.2E-44 1.8E-48 361.5 16.7 251 288-564 20-281 (353)
73 2y0a_A Death-associated protei 100.0 1.1E-43 3.8E-48 356.3 18.9 253 289-564 9-272 (326)
74 1u59_A Tyrosine-protein kinase 100.0 1.1E-43 3.8E-48 350.0 18.5 264 289-575 7-277 (287)
75 2izr_A Casein kinase I isoform 100.0 1.7E-43 5.7E-48 356.0 20.1 265 289-572 7-283 (330)
76 2eva_A TAK1 kinase - TAB1 chim 100.0 1.6E-43 5.5E-48 352.1 19.6 258 290-574 7-267 (307)
77 3brb_A Proto-oncogene tyrosine 100.0 1.7E-43 5.8E-48 353.3 19.7 270 283-574 26-312 (313)
78 3kex_A Receptor tyrosine-prote 100.0 6.1E-44 2.1E-48 358.3 15.8 260 290-572 12-278 (325)
79 3kfa_A Tyrosine-protein kinase 100.0 9.6E-44 3.3E-48 350.7 17.0 267 283-573 5-274 (288)
80 3dbq_A Dual specificity protei 100.0 1.1E-43 3.6E-48 359.2 17.6 255 288-565 6-275 (343)
81 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.3E-44 2.2E-48 358.1 15.5 248 289-564 7-259 (336)
82 1fot_A TPK1 delta, CAMP-depend 100.0 3.7E-43 1.3E-47 350.4 20.8 246 290-564 5-259 (318)
83 1k9a_A Carboxyl-terminal SRC k 100.0 1.8E-43 6.2E-48 370.2 19.3 256 286-571 188-446 (450)
84 4dc2_A Protein kinase C IOTA t 100.0 3.1E-43 1E-47 359.9 20.5 252 289-564 50-319 (396)
85 1ob3_A PFPK5, cell division co 100.0 8.1E-44 2.8E-48 351.1 15.6 267 291-564 2-281 (288)
86 2x4f_A Myosin light chain kina 100.0 1.9E-43 6.3E-48 360.7 18.6 247 296-564 94-343 (373)
87 2w4o_A Calcium/calmodulin-depe 100.0 1.2E-43 4E-48 359.4 16.9 253 288-564 50-306 (349)
88 3llt_A Serine/threonine kinase 100.0 1.8E-43 6E-48 360.4 18.2 278 275-564 19-356 (360)
89 3op5_A Serine/threonine-protei 100.0 6.8E-44 2.3E-48 363.7 15.1 274 288-574 32-333 (364)
90 3lxl_A Tyrosine-protein kinase 100.0 8.4E-44 2.9E-48 357.7 15.4 269 290-575 22-308 (327)
91 1xjd_A Protein kinase C, theta 100.0 1.3E-43 4.4E-48 357.2 16.7 252 287-564 13-270 (345)
92 3cc6_A Protein tyrosine kinase 100.0 6.8E-43 2.3E-47 343.3 21.3 263 288-574 9-277 (281)
93 3gni_B Strad alpha; kinase fol 100.0 2.6E-43 8.9E-48 362.8 19.2 269 288-564 22-334 (389)
94 2wqm_A Serine/threonine-protei 100.0 6.7E-43 2.3E-47 348.5 21.4 267 289-576 30-303 (310)
95 3lxp_A Non-receptor tyrosine-p 100.0 2.8E-43 9.7E-48 352.3 18.6 265 290-576 29-316 (318)
96 3lzb_A Epidermal growth factor 100.0 1.8E-43 6.2E-48 354.9 17.0 259 290-571 14-279 (327)
97 2zmd_A Dual specificity protei 100.0 3.4E-43 1.2E-47 361.2 19.2 252 290-564 55-321 (390)
98 3a8x_A Protein kinase C IOTA t 100.0 9.7E-43 3.3E-47 351.5 22.2 251 290-564 8-276 (345)
99 3dtc_A Mitogen-activated prote 100.0 1.1E-43 3.9E-48 346.9 14.7 252 289-568 5-271 (271)
100 1p4o_A Insulin-like growth fac 100.0 5.2E-44 1.8E-48 358.5 12.6 268 282-571 16-300 (322)
101 4fvq_A Tyrosine-protein kinase 100.0 5.2E-44 1.8E-48 352.7 12.4 254 290-572 7-277 (289)
102 2vd5_A DMPK protein; serine/th 100.0 2.5E-43 8.4E-48 362.9 17.7 264 281-564 51-328 (412)
103 2zv2_A Calcium/calmodulin-depe 100.0 2.2E-43 7.5E-48 349.9 16.7 250 290-564 12-293 (298)
104 1mqb_A Ephrin type-A receptor 100.0 7.9E-43 2.7E-47 351.2 20.6 264 289-574 42-313 (333)
105 3f66_A Hepatocyte growth facto 100.0 3.9E-43 1.3E-47 348.1 18.0 265 288-574 22-295 (298)
106 1opk_A P150, C-ABL, proto-onco 100.0 1.4E-43 4.7E-48 375.3 15.5 261 285-569 214-477 (495)
107 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.3E-43 1.8E-47 353.9 19.1 246 290-564 40-294 (350)
108 3v8s_A RHO-associated protein 100.0 1.8E-43 6.3E-48 363.6 16.0 261 282-564 60-330 (410)
109 3kmu_A ILK, integrin-linked ki 100.0 4.8E-43 1.7E-47 342.3 18.1 253 289-570 8-270 (271)
110 1qcf_A Haematopoetic cell kina 100.0 5.9E-44 2E-48 374.6 12.2 264 284-572 181-446 (454)
111 3uc3_A Serine/threonine-protei 100.0 4.1E-43 1.4E-47 356.8 17.9 255 288-564 17-275 (361)
112 2buj_A Serine/threonine-protei 100.0 6.6E-43 2.3E-47 349.7 19.2 266 288-573 26-309 (317)
113 2w1i_A JAK2; chromosomal rearr 100.0 3E-43 1E-47 353.4 16.7 275 290-573 40-325 (326)
114 2pmi_A Negative RE, cyclin-dep 100.0 2.8E-43 9.5E-48 352.1 16.2 267 290-564 4-294 (317)
115 4e5w_A Tyrosine-protein kinase 100.0 2.4E-43 8.2E-48 350.3 15.7 263 290-569 20-301 (302)
116 2yfx_A Tyrosine-protein kinase 100.0 4.5E-43 1.5E-47 352.4 17.8 264 288-573 27-307 (327)
117 2yex_A Serine/threonine-protei 100.0 5.5E-43 1.9E-47 343.0 17.9 254 290-564 6-262 (276)
118 3kk8_A Calcium/calmodulin depe 100.0 1.7E-42 5.8E-47 341.0 21.3 253 289-564 4-262 (284)
119 1qpc_A LCK kinase; alpha beta 100.0 2.4E-43 8.4E-48 346.1 15.2 266 285-575 7-274 (279)
120 3c1x_A Hepatocyte growth facto 100.0 2.2E-43 7.5E-48 360.0 15.3 263 291-575 89-360 (373)
121 3p1a_A MYT1 kinase, membrane-a 100.0 3.5E-43 1.2E-47 350.4 16.4 246 290-564 56-305 (311)
122 3ork_A Serine/threonine protei 100.0 6.2E-44 2.1E-48 356.0 10.6 260 289-568 10-279 (311)
123 3a62_A Ribosomal protein S6 ki 100.0 1E-42 3.5E-47 349.4 19.4 250 289-564 15-277 (327)
124 3f3z_A Calcium/calmodulin-depe 100.0 6.9E-43 2.4E-47 342.5 17.7 252 289-564 7-262 (277)
125 3kn6_A Ribosomal protein S6 ki 100.0 1E-42 3.5E-47 349.0 19.1 249 296-564 16-271 (325)
126 2y94_A 5'-AMP-activated protei 100.0 1.8E-42 6.1E-47 362.6 21.8 248 290-564 15-267 (476)
127 3pls_A Macrophage-stimulating 100.0 1.7E-42 5.9E-47 343.4 20.6 263 292-575 22-292 (298)
128 2i0e_A Protein kinase C-beta I 100.0 6.4E-43 2.2E-47 353.3 17.8 250 289-564 18-277 (353)
129 3hko_A Calcium/calmodulin-depe 100.0 3.3E-43 1.1E-47 356.2 15.8 261 285-564 20-331 (345)
130 3g2f_A Bone morphogenetic prot 100.0 1.3E-43 4.4E-48 357.8 12.7 276 288-577 10-325 (336)
131 1b6c_B TGF-B superfamily recep 100.0 5E-42 1.7E-46 347.1 23.9 277 282-572 33-338 (342)
132 3mtl_A Cell division protein k 100.0 2E-43 6.9E-48 354.2 13.5 266 291-564 2-282 (324)
133 3g33_A Cell division protein k 100.0 1.9E-42 6.5E-47 344.8 20.4 269 288-564 6-297 (308)
134 1xbb_A Tyrosine-protein kinase 100.0 7.6E-43 2.6E-47 344.7 17.3 265 287-575 12-284 (291)
135 3cok_A Serine/threonine-protei 100.0 5.4E-43 1.8E-47 343.5 16.1 251 289-564 9-263 (278)
136 4hgt_A Casein kinase I isoform 100.0 2.2E-42 7.5E-47 342.3 20.4 267 288-574 6-284 (296)
137 2eue_A Carbon catabolite derep 100.0 1.5E-42 5E-47 339.8 18.7 247 290-564 12-263 (275)
138 4agu_A Cyclin-dependent kinase 100.0 1.3E-42 4.5E-47 346.5 18.7 265 290-564 2-285 (311)
139 3oz6_A Mitogen-activated prote 100.0 1.1E-42 3.7E-47 358.0 18.5 269 288-564 6-329 (388)
140 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.3E-43 8E-48 369.6 13.6 262 285-571 178-441 (452)
141 3fdn_A Serine/threonine-protei 100.0 2.6E-42 9E-47 338.7 20.3 249 289-565 7-259 (279)
142 3qd2_B Eukaryotic translation 100.0 1.1E-42 3.8E-47 350.3 17.6 252 289-564 4-326 (332)
143 2h34_A Serine/threonine-protei 100.0 1.5E-42 5.1E-47 345.6 18.3 264 288-573 31-299 (309)
144 2a2a_A Death-associated protei 100.0 1.4E-42 4.7E-47 347.9 18.1 253 289-564 10-273 (321)
145 1u5q_A Serine/threonine protei 100.0 1.9E-42 6.4E-47 350.0 19.2 247 291-565 54-307 (348)
146 1nxk_A MAP kinase-activated pr 100.0 3.9E-42 1.3E-46 354.3 21.5 252 289-565 59-323 (400)
147 2jam_A Calcium/calmodulin-depe 100.0 2.5E-42 8.7E-47 343.2 19.4 252 289-564 7-262 (304)
148 3uzp_A CKI-delta, CKID, casein 100.0 2.2E-42 7.5E-47 342.3 18.7 266 289-574 7-284 (296)
149 3ttj_A Mitogen-activated prote 100.0 1.2E-42 4.1E-47 364.5 17.7 264 289-564 60-356 (464)
150 2ac3_A MAP kinase-interacting 100.0 1.5E-42 5.2E-47 346.9 17.5 257 290-564 11-296 (316)
151 3gxj_A TGF-beta receptor type- 100.0 6.5E-44 2.2E-48 354.5 7.2 268 290-571 2-298 (303)
152 1byg_A CSK, protein (C-termina 100.0 5.8E-43 2E-47 343.2 13.7 254 288-571 18-274 (278)
153 1fvr_A Tyrosine-protein kinase 100.0 1.5E-42 5.1E-47 348.6 17.0 259 290-573 24-303 (327)
154 4eut_A Serine/threonine-protei 100.0 8.2E-43 2.8E-47 359.5 15.2 276 290-571 8-310 (396)
155 1ua2_A CAK, cell division prot 100.0 1.4E-42 4.9E-47 351.4 16.6 272 286-564 5-292 (346)
156 3i6u_A CDS1, serine/threonine- 100.0 2.4E-42 8E-47 358.4 18.4 254 288-564 132-400 (419)
157 4ejn_A RAC-alpha serine/threon 100.0 9.9E-43 3.4E-47 364.7 15.4 250 289-564 146-405 (446)
158 2jii_A Serine/threonine-protei 100.0 7.5E-43 2.6E-47 354.4 14.0 267 290-574 41-340 (352)
159 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.4E-42 4.6E-47 354.3 15.9 260 284-573 58-342 (365)
160 3is5_A Calcium-dependent prote 100.0 2.1E-42 7.1E-47 340.5 16.6 252 289-564 20-279 (285)
161 2qr7_A Ribosomal protein S6 ki 100.0 7.6E-43 2.6E-47 351.8 13.6 254 289-565 20-279 (342)
162 2r5t_A Serine/threonine-protei 100.0 2.1E-42 7.3E-47 351.9 16.6 246 289-560 36-286 (373)
163 2v62_A Serine/threonine-protei 100.0 7.3E-43 2.5E-47 353.4 13.1 266 290-569 36-327 (345)
164 4aaa_A Cyclin-dependent kinase 100.0 1.8E-42 6.3E-47 348.5 15.8 269 289-564 23-307 (331)
165 2ozo_A Tyrosine-protein kinase 100.0 2.3E-42 8E-47 374.3 17.8 261 291-574 335-602 (613)
166 2acx_A G protein-coupled recep 100.0 5.7E-42 1.9E-46 363.4 20.2 252 289-564 182-445 (576)
167 1t4h_A Serine/threonine-protei 100.0 9.2E-42 3.1E-46 336.8 20.3 248 291-564 26-283 (290)
168 3dls_A PAS domain-containing s 100.0 6.1E-43 2.1E-47 352.0 11.8 243 289-564 22-275 (335)
169 2a19_B Interferon-induced, dou 100.0 4.2E-42 1.4E-46 338.1 17.3 254 288-575 8-279 (284)
170 2clq_A Mitogen-activated prote 100.0 9.9E-42 3.4E-46 337.4 20.0 253 290-564 21-279 (295)
171 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.8E-42 6.2E-47 348.1 14.9 269 288-564 31-319 (329)
172 2y7j_A Phosphorylase B kinase 100.0 1.1E-41 3.6E-46 347.2 20.7 259 283-564 86-360 (365)
173 3fme_A Dual specificity mitoge 100.0 2.7E-42 9.4E-47 340.6 15.8 253 288-564 4-267 (290)
174 2w5a_A Serine/threonine-protei 100.0 2.2E-42 7.5E-47 339.3 14.9 253 290-566 5-270 (279)
175 2vgo_A Serine/threonine-protei 100.0 1.5E-41 5.1E-46 334.3 20.8 247 290-564 13-263 (284)
176 3bhy_A Death-associated protei 100.0 5.8E-42 2E-46 337.0 17.7 257 290-569 4-273 (283)
177 3ll6_A Cyclin G-associated kin 100.0 1.9E-41 6.4E-46 342.1 21.8 262 286-573 23-311 (337)
178 3eqc_A Dual specificity mitoge 100.0 2.3E-42 7.8E-47 352.1 15.3 267 289-565 31-326 (360)
179 2j7t_A Serine/threonine-protei 100.0 1.3E-42 4.5E-47 345.0 13.0 254 289-564 17-276 (302)
180 3rp9_A Mitogen-activated prote 100.0 6.1E-42 2.1E-46 360.2 18.5 271 289-564 51-397 (458)
181 3n9x_A Phosphotransferase; mal 100.0 7.6E-42 2.6E-46 356.2 19.0 271 289-564 24-362 (432)
182 2rku_A Serine/threonine-protei 100.0 1.4E-41 4.8E-46 336.2 19.9 251 289-565 13-267 (294)
183 3mi9_A Cell division protein k 100.0 9.7E-42 3.3E-46 346.2 19.1 269 290-564 16-312 (351)
184 1u46_A ACK-1, activated CDC42 100.0 2.4E-42 8.3E-47 341.1 14.3 260 290-571 17-285 (291)
185 2owb_A Serine/threonine-protei 100.0 5.5E-42 1.9E-46 345.5 17.1 250 289-564 39-292 (335)
186 3mwu_A Calmodulin-domain prote 100.0 6.9E-42 2.4E-46 362.3 18.5 251 289-564 20-277 (486)
187 3a7i_A MST3 kinase, serine/thr 100.0 1.5E-41 5E-46 337.6 19.7 250 290-565 21-272 (303)
188 3nsz_A CK II alpha, casein kin 100.0 3.5E-42 1.2E-46 346.5 15.3 263 289-564 34-320 (330)
189 1cm8_A Phosphorylated MAP kina 100.0 9.7E-42 3.3E-46 347.6 18.6 263 289-564 23-308 (367)
190 3com_A Serine/threonine-protei 100.0 9.7E-42 3.3E-46 340.7 18.2 253 288-564 26-279 (314)
191 3cek_A Dual specificity protei 100.0 5.6E-42 1.9E-46 342.2 16.0 263 280-565 17-294 (313)
192 2h8h_A Proto-oncogene tyrosine 100.0 9.1E-43 3.1E-47 372.3 10.9 262 284-570 260-523 (535)
193 3c4z_A Rhodopsin kinase; Ser/T 100.0 2E-41 6.8E-46 358.5 21.0 255 289-564 183-449 (543)
194 2pml_X PFPK7, Ser/Thr protein 100.0 2.9E-42 1E-46 349.7 13.9 266 289-564 29-323 (348)
195 1x8b_A WEE1HU, WEE1-like prote 100.0 1.9E-41 6.3E-46 334.2 19.2 245 289-564 9-280 (289)
196 2h6d_A 5'-AMP-activated protei 100.0 2.9E-41 9.9E-46 330.7 20.4 249 289-564 9-262 (276)
197 3q5i_A Protein kinase; CDPK, m 100.0 1.8E-41 6.3E-46 360.6 20.5 253 288-564 33-302 (504)
198 2xrw_A Mitogen-activated prote 100.0 2.7E-41 9.2E-46 345.2 20.8 264 289-564 23-319 (371)
199 3lm5_A Serine/threonine-protei 100.0 5.8E-42 2E-46 344.1 15.3 262 281-564 18-288 (327)
200 3pg1_A Mitogen-activated prote 100.0 1.1E-41 3.9E-46 347.2 17.6 277 280-564 11-317 (362)
201 2wtk_C Serine/threonine-protei 100.0 5E-41 1.7E-45 334.1 21.7 252 289-564 3-264 (305)
202 4fl3_A Tyrosine-protein kinase 100.0 1.2E-41 4.2E-46 369.5 18.7 252 297-572 375-633 (635)
203 2vwi_A Serine/threonine-protei 100.0 2E-42 6.7E-47 343.8 11.4 265 286-564 10-288 (303)
204 3an0_A Dual specificity mitoge 100.0 6.1E-42 2.1E-46 346.1 15.2 255 286-564 46-311 (340)
205 3lij_A Calcium/calmodulin depe 100.0 1.2E-41 4.1E-46 361.1 18.1 252 289-564 35-292 (494)
206 2ycf_A Serine/threonine-protei 100.0 1.3E-41 4.4E-46 341.0 17.4 254 288-564 7-275 (322)
207 3byv_A Rhoptry kinase; malaria 100.0 1E-42 3.5E-47 356.7 8.8 251 288-572 70-370 (377)
208 3q60_A ROP5B; pseudokinase, tr 100.0 2.5E-42 8.7E-47 353.0 11.6 265 289-573 60-364 (371)
209 1phk_A Phosphorylase kinase; g 100.0 4.2E-41 1.4E-45 333.5 19.8 254 288-564 14-284 (298)
210 3nyv_A Calmodulin-domain prote 100.0 4.9E-42 1.7E-46 363.6 13.9 252 289-564 24-282 (484)
211 3sv0_A Casein kinase I-like; t 100.0 5.6E-41 1.9E-45 351.9 21.5 264 289-572 5-280 (483)
212 2j0j_A Focal adhesion kinase 1 100.0 2.9E-41 9.9E-46 367.9 20.0 264 285-572 384-653 (656)
213 2r3i_A Cell division protein k 100.0 2.5E-41 8.6E-46 335.2 17.3 268 290-564 2-284 (299)
214 2fst_X Mitogen-activated prote 100.0 1.3E-41 4.3E-46 346.3 15.3 264 288-564 26-312 (367)
215 3qyz_A Mitogen-activated prote 100.0 3E-41 1E-45 344.2 18.1 269 288-564 24-314 (364)
216 3kvw_A DYRK2, dual specificity 100.0 2.6E-41 8.9E-46 351.4 17.9 198 289-496 95-302 (429)
217 3eb0_A Putative uncharacterize 100.0 1.7E-41 5.8E-46 348.4 16.1 267 287-570 3-330 (383)
218 1vzo_A Ribosomal protein S6 ki 100.0 5.8E-42 2E-46 347.9 11.9 255 290-565 53-323 (355)
219 2x7f_A TRAF2 and NCK-interacti 100.0 2.2E-41 7.6E-46 340.0 15.7 262 279-564 12-287 (326)
220 3pfq_A PKC-B, PKC-beta, protei 100.0 4.8E-41 1.7E-45 367.3 19.6 251 288-564 338-598 (674)
221 1wak_A Serine/threonine-protei 100.0 2.7E-41 9.4E-46 348.9 16.4 266 289-564 35-392 (397)
222 2i6l_A Mitogen-activated prote 100.0 4.9E-41 1.7E-45 336.4 17.0 268 289-564 9-306 (320)
223 1zy4_A Serine/threonine-protei 100.0 3.4E-41 1.2E-45 334.8 15.4 254 289-564 4-284 (303)
224 1z57_A Dual specificity protei 100.0 1.1E-40 3.8E-45 336.6 18.3 264 289-564 12-329 (339)
225 2b9h_A MAP kinase FUS3, mitoge 100.0 1.8E-40 6.1E-45 337.2 18.5 269 289-564 9-306 (353)
226 1j1b_A Glycogen synthase kinas 100.0 6.5E-41 2.2E-45 347.7 15.5 262 291-564 54-337 (420)
227 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.6E-41 5.4E-46 340.0 10.5 267 283-573 25-305 (319)
228 2vx3_A Dual specificity tyrosi 100.0 3.8E-40 1.3E-44 338.2 20.7 204 285-496 48-261 (382)
229 4exu_A Mitogen-activated prote 100.0 1.5E-40 5E-45 339.8 17.4 262 289-564 40-324 (371)
230 2wei_A Calmodulin-domain prote 100.0 1.6E-40 5.6E-45 327.4 17.0 254 287-564 18-277 (287)
231 3rgf_A Cyclin-dependent kinase 100.0 6.9E-41 2.4E-45 346.5 15.0 270 289-564 18-334 (405)
232 4e7w_A Glycogen synthase kinas 100.0 4.3E-41 1.5E-45 346.2 13.4 260 289-564 38-322 (394)
233 3aln_A Dual specificity mitoge 100.0 1.5E-40 5.1E-45 334.0 15.6 257 287-564 18-286 (327)
234 1blx_A Cyclin-dependent kinase 100.0 1.5E-40 5E-45 334.0 15.5 269 288-564 8-297 (326)
235 2dyl_A Dual specificity mitoge 100.0 1.7E-40 6E-45 332.2 15.0 254 288-564 22-284 (318)
236 2eu9_A Dual specificity protei 100.0 5.1E-40 1.7E-44 334.1 18.3 264 289-564 17-334 (355)
237 3fhr_A MAP kinase-activated pr 100.0 3.2E-40 1.1E-44 332.5 16.3 255 288-565 25-289 (336)
238 3e3p_A Protein kinase, putativ 100.0 5.3E-40 1.8E-44 334.7 17.5 274 284-564 16-315 (360)
239 2rio_A Serine/threonine-protei 100.0 9.9E-40 3.4E-44 340.2 19.5 252 291-564 15-296 (434)
240 3coi_A Mitogen-activated prote 100.0 3E-40 1E-44 335.5 14.6 262 289-564 22-306 (353)
241 1q8y_A SR protein kinase; tran 100.0 1.2E-39 4.1E-44 333.8 18.3 263 290-564 18-334 (373)
242 3p23_A Serine/threonine-protei 100.0 1.2E-39 4.2E-44 338.5 17.3 253 288-564 21-284 (432)
243 3a99_A Proto-oncogene serine/t 100.0 2.3E-40 7.8E-45 331.4 10.4 247 284-564 36-294 (320)
244 2iwi_A Serine/threonine-protei 100.0 4.8E-40 1.6E-44 328.1 12.7 246 285-564 25-284 (312)
245 3qa8_A MGC80376 protein; kinas 100.0 1.8E-39 6.1E-44 347.4 15.2 264 289-562 12-296 (676)
246 3uqc_A Probable conserved tran 100.0 1.5E-38 5.2E-43 312.3 19.5 235 289-572 29-267 (286)
247 3m2w_A MAP kinase-activated pr 100.0 9.6E-38 3.3E-42 309.3 19.3 232 289-564 15-257 (299)
248 2pzi_A Probable serine/threoni 100.0 2.7E-38 9.1E-43 348.0 16.6 244 289-572 78-330 (681)
249 3dzo_A Rhoptry kinase domain; 100.0 1.1E-38 3.9E-43 330.0 8.0 251 288-572 75-374 (413)
250 2vuw_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 317.5 5.8 245 290-564 19-332 (336)
251 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-31 5E-36 266.3 14.4 209 3-213 99-308 (313)
252 3rgz_A Protein brassinosteroid 100.0 5.6E-31 1.9E-35 294.0 18.2 230 2-234 463-762 (768)
253 4azs_A Methyltransferase WBDD; 100.0 1.4E-31 4.8E-36 286.3 3.8 186 298-493 241-438 (569)
254 1ozn_A Reticulon 4 receptor; N 100.0 3E-28 1E-32 239.3 17.5 210 4-213 31-242 (285)
255 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-28 5E-33 244.6 12.4 205 3-209 74-281 (313)
256 3zyj_A Leucine-rich repeat-con 100.0 8.1E-28 2.8E-32 251.2 18.5 211 1-213 84-296 (440)
257 3zyi_A Leucine-rich repeat-con 100.0 1.2E-27 4.2E-32 250.8 18.4 210 2-213 96-307 (452)
258 1ozn_A Reticulon 4 receptor; N 100.0 4E-28 1.4E-32 238.4 13.7 214 1-214 52-266 (285)
259 1p9a_G Platelet glycoprotein I 99.9 2.5E-27 8.4E-32 232.7 17.9 205 2-212 7-211 (290)
260 2o6q_A Variable lymphocyte rec 99.9 9.9E-27 3.4E-31 226.4 20.7 205 6-213 17-222 (270)
261 4fcg_A Uncharacterized protein 99.9 3.6E-27 1.2E-31 236.0 15.9 201 4-209 80-290 (328)
262 3rgz_A Protein brassinosteroid 99.9 3.1E-27 1E-31 263.8 17.1 207 3-209 440-717 (768)
263 3oja_A Leucine-rich immune mol 99.9 6.3E-28 2.2E-32 254.5 10.3 206 3-213 32-254 (487)
264 2z62_A TOLL-like receptor 4, v 99.9 7.5E-27 2.6E-31 228.2 16.4 208 5-213 28-241 (276)
265 2z66_A Variable lymphocyte rec 99.9 4E-27 1.4E-31 233.8 14.4 208 3-211 50-263 (306)
266 3v47_A TOLL-like receptor 5B a 99.9 2.2E-26 7.5E-31 241.7 17.2 213 1-213 75-412 (455)
267 3en9_A Glycoprotease, O-sialog 99.9 1.2E-27 4.1E-32 254.5 7.2 186 294-494 339-539 (540)
268 2o6q_A Variable lymphocyte rec 99.9 8.8E-26 3E-30 219.7 19.6 187 5-191 37-223 (270)
269 4fcg_A Uncharacterized protein 99.9 3.4E-26 1.2E-30 228.9 16.6 201 2-206 101-311 (328)
270 2id5_A Lingo-1, leucine rich r 99.9 2.7E-26 9.3E-31 242.4 15.9 211 1-211 52-335 (477)
271 2z80_A TOLL-like receptor 2, v 99.9 9.5E-27 3.2E-31 235.9 10.5 208 5-212 52-317 (353)
272 3m19_A Variable lymphocyte rec 99.9 3.6E-25 1.2E-29 212.9 18.7 183 5-190 14-196 (251)
273 3o6n_A APL1; leucine-rich repe 99.9 3E-25 1E-29 228.1 18.8 88 3-90 91-178 (390)
274 3oja_B Anopheles plasmodium-re 99.9 3.2E-25 1.1E-29 240.5 18.6 107 101-211 254-360 (597)
275 3vq2_A TLR4, TOLL-like recepto 99.9 8.9E-26 3E-30 245.9 14.0 212 1-213 346-562 (606)
276 3v47_A TOLL-like receptor 5B a 99.9 3.1E-25 1.1E-29 233.0 16.9 121 1-121 50-174 (455)
277 2z62_A TOLL-like receptor 4, v 99.9 4.1E-25 1.4E-29 215.8 16.6 191 1-192 48-243 (276)
278 3t6q_A CD180 antigen; protein- 99.9 1.9E-25 6.6E-30 243.3 15.5 211 2-213 347-564 (606)
279 1wwl_A Monocyte differentiatio 99.9 7.6E-26 2.6E-30 225.0 10.8 203 3-210 93-310 (312)
280 3rfs_A Internalin B, repeat mo 99.9 1E-24 3.4E-29 212.4 18.6 185 3-191 39-223 (272)
281 1xku_A Decorin; proteoglycan, 99.9 1.2E-24 4.2E-29 218.2 19.7 206 5-213 52-280 (330)
282 2z66_A Variable lymphocyte rec 99.9 9.3E-26 3.2E-30 223.9 11.4 210 3-213 76-291 (306)
283 3zyi_A Leucine-rich repeat-con 99.9 5.9E-25 2E-29 230.3 17.6 206 5-212 75-282 (452)
284 3j0a_A TOLL-like receptor 5; m 99.9 3E-25 1E-29 250.3 15.0 206 2-211 287-562 (844)
285 1p9a_G Platelet glycoprotein I 99.9 1.4E-24 4.6E-29 213.2 17.5 182 4-189 30-211 (290)
286 3rfs_A Internalin B, repeat mo 99.9 6.4E-25 2.2E-29 213.8 14.8 182 2-192 60-241 (272)
287 3zyj_A Leucine-rich repeat-con 99.9 9.8E-25 3.4E-29 227.8 17.1 207 5-213 64-272 (440)
288 2ft3_A Biglycan; proteoglycan, 99.9 2.5E-24 8.6E-29 216.1 19.3 206 5-213 54-281 (332)
289 2xwt_C Thyrotropin receptor; s 99.9 6.4E-25 2.2E-29 209.5 14.1 197 5-206 31-236 (239)
290 1ziw_A TOLL-like receptor 3; i 99.9 1E-24 3.6E-29 240.7 16.1 211 3-213 403-626 (680)
291 3o6n_A APL1; leucine-rich repe 99.9 1.5E-24 5.1E-29 222.9 16.2 203 3-207 67-306 (390)
292 3oja_B Anopheles plasmodium-re 99.9 1.2E-24 4E-29 236.1 16.1 205 3-209 73-314 (597)
293 3o53_A Protein LRIM1, AGAP0063 99.9 4.7E-25 1.6E-29 219.8 11.6 205 3-212 32-253 (317)
294 1xku_A Decorin; proteoglycan, 99.9 6.3E-24 2.1E-28 213.0 18.1 207 1-211 72-308 (330)
295 2id5_A Lingo-1, leucine rich r 99.9 2.4E-24 8.4E-29 227.5 14.5 203 5-207 32-235 (477)
296 2ft3_A Biglycan; proteoglycan, 99.9 1.3E-23 4.6E-28 210.8 18.0 207 1-211 74-309 (332)
297 4glp_A Monocyte differentiatio 99.9 2.8E-24 9.4E-29 213.6 12.7 202 4-210 90-308 (310)
298 2z80_A TOLL-like receptor 2, v 99.9 2.1E-24 7.3E-29 218.6 12.2 180 5-187 31-212 (353)
299 4eco_A Uncharacterized protein 99.9 1.9E-24 6.5E-29 235.8 11.6 205 1-209 202-446 (636)
300 1h6u_A Internalin H; cell adhe 99.9 1.6E-23 5.3E-28 207.7 16.2 196 3-213 39-234 (308)
301 3m19_A Variable lymphocyte rec 99.9 3E-23 1E-27 199.4 17.6 182 29-213 14-196 (251)
302 1wwl_A Monocyte differentiatio 99.9 3.1E-24 1.1E-28 213.3 10.9 180 2-187 118-310 (312)
303 1zar_A RIO2 kinase; serine kin 99.9 1.8E-24 6.2E-29 210.9 7.5 151 285-466 84-252 (282)
304 3vq2_A TLR4, TOLL-like recepto 99.9 1.2E-23 4E-28 229.2 14.7 188 2-191 373-563 (606)
305 3t6q_A CD180 antigen; protein- 99.9 3E-23 1E-27 226.0 17.5 160 6-165 34-195 (606)
306 4ecn_A Leucine-rich repeat pro 99.9 8.8E-24 3E-28 234.9 13.0 185 21-210 440-658 (876)
307 4eco_A Uncharacterized protein 99.9 3.5E-23 1.2E-27 225.8 16.9 206 3-213 374-604 (636)
308 4ecn_A Leucine-rich repeat pro 99.9 9.3E-24 3.2E-28 234.7 12.2 204 1-209 444-686 (876)
309 2z63_A TOLL-like receptor 4, v 99.9 2E-23 6.8E-28 225.7 14.5 208 3-213 323-535 (570)
310 2z7x_B TOLL-like receptor 1, v 99.9 5.8E-23 2E-27 219.4 16.9 203 5-212 247-484 (520)
311 2z63_A TOLL-like receptor 4, v 99.9 1.4E-23 4.6E-28 226.9 11.4 190 2-192 344-537 (570)
312 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 6.5E-23 2.2E-27 221.0 16.2 160 50-212 350-513 (562)
313 1ziw_A TOLL-like receptor 3; i 99.9 7E-23 2.4E-27 226.1 16.7 159 6-164 26-186 (680)
314 3j0a_A TOLL-like receptor 5; m 99.9 7.3E-23 2.5E-27 230.8 17.1 90 2-91 70-162 (844)
315 2o6s_A Variable lymphocyte rec 99.9 8.9E-23 3E-27 190.2 13.7 175 8-192 10-184 (208)
316 2xwt_C Thyrotropin receptor; s 99.9 9.5E-23 3.3E-27 194.4 13.7 177 1-183 51-236 (239)
317 1h6u_A Internalin H; cell adhe 99.9 1.2E-22 4.1E-27 201.3 14.7 174 2-189 60-233 (308)
318 2xot_A Amphoterin-induced prot 99.9 7.7E-23 2.6E-27 207.5 13.5 178 8-188 21-204 (361)
319 2z81_A CD282 antigen, TOLL-lik 99.9 5.9E-23 2E-27 220.9 13.3 202 5-207 26-234 (549)
320 3oja_A Leucine-rich immune mol 99.9 8.1E-24 2.8E-28 223.1 5.9 207 1-213 54-286 (487)
321 4fmz_A Internalin; leucine ric 99.9 2.7E-22 9.4E-27 202.6 16.2 191 4-207 154-344 (347)
322 2o6s_A Variable lymphocyte rec 99.9 2.3E-22 7.9E-27 187.4 13.9 164 4-174 27-190 (208)
323 2z7x_B TOLL-like receptor 1, v 99.9 1.6E-22 5.3E-27 216.1 14.3 65 146-210 321-388 (520)
324 4glp_A Monocyte differentiatio 99.9 1.6E-22 5.3E-27 200.9 12.8 180 2-187 114-308 (310)
325 1o6v_A Internalin A; bacterial 99.9 7E-22 2.4E-26 207.8 17.5 198 2-212 174-391 (466)
326 2v9t_B SLIT homolog 2 protein 99.9 4.2E-22 1.4E-26 187.1 14.0 153 8-163 14-166 (220)
327 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 6.9E-22 2.4E-26 213.0 16.7 108 5-115 52-160 (562)
328 2v70_A SLIT-2, SLIT homolog 2 99.9 6.8E-22 2.3E-26 185.7 14.2 153 8-163 14-167 (220)
329 1h6t_A Internalin B; cell adhe 99.9 7.8E-22 2.7E-26 193.7 14.4 171 3-187 44-214 (291)
330 2v70_A SLIT-2, SLIT homolog 2 99.9 3.2E-22 1.1E-26 187.9 10.9 157 31-190 13-170 (220)
331 2z81_A CD282 antigen, TOLL-lik 99.9 6.6E-22 2.3E-26 212.7 14.1 198 5-213 310-514 (549)
332 2v9t_B SLIT homolog 2 protein 99.9 4.1E-22 1.4E-26 187.2 10.7 155 32-189 14-168 (220)
333 4g8a_A TOLL-like receptor 4; l 99.9 8.8E-22 3E-26 215.4 14.9 181 9-192 35-220 (635)
334 3o53_A Protein LRIM1, AGAP0063 99.9 4E-22 1.4E-26 198.6 10.2 200 2-207 55-273 (317)
335 3e6j_A Variable lymphocyte rec 99.9 3.7E-21 1.3E-25 181.9 15.8 154 7-164 21-174 (229)
336 1o6v_A Internalin A; bacterial 99.9 6.6E-21 2.2E-25 200.4 17.9 194 1-210 152-345 (466)
337 4g8a_A TOLL-like receptor 4; l 99.9 3.3E-21 1.1E-25 210.8 16.2 208 3-211 369-582 (635)
338 4fmz_A Internalin; leucine ric 99.9 9.8E-21 3.3E-25 191.2 17.9 170 4-186 43-212 (347)
339 2xot_A Amphoterin-induced prot 99.8 1.7E-21 5.7E-26 197.7 11.2 179 31-212 20-205 (361)
340 3e6j_A Variable lymphocyte rec 99.8 1.2E-20 4E-25 178.4 15.6 157 30-190 20-176 (229)
341 3bz5_A Internalin-J, INLJ; leu 99.8 2.7E-20 9.1E-25 194.4 19.5 187 3-209 40-246 (457)
342 1m9s_A Internalin B; cell inva 99.8 7.1E-21 2.4E-25 204.6 14.8 173 3-189 41-213 (605)
343 4ezg_A Putative uncharacterize 99.8 5.9E-21 2E-25 176.2 12.1 154 25-186 40-194 (197)
344 1h6t_A Internalin B; cell adhe 99.8 3.9E-21 1.3E-25 188.7 9.7 192 7-213 26-217 (291)
345 3bz5_A Internalin-J, INLJ; leu 99.8 7.4E-20 2.5E-24 191.1 18.3 171 1-191 81-251 (457)
346 4ay9_X Follicle-stimulating ho 99.8 2.6E-20 9E-25 188.0 14.3 197 5-204 30-231 (350)
347 2ca6_A RAN GTPase-activating p 99.8 2.7E-22 9.1E-27 205.7 -0.8 207 3-209 30-287 (386)
348 3cvr_A Invasion plasmid antige 99.8 4.8E-20 1.6E-24 196.0 16.5 180 6-212 60-246 (571)
349 1xeu_A Internalin C; cellular 99.8 5.2E-21 1.8E-25 184.8 8.1 171 4-189 18-188 (263)
350 4ezg_A Putative uncharacterize 99.8 2.2E-20 7.6E-25 172.3 10.9 153 3-163 42-195 (197)
351 2ast_B S-phase kinase-associat 99.8 2.6E-21 9E-26 194.4 3.6 181 3-183 91-282 (336)
352 1m9s_A Internalin B; cell inva 99.8 1.8E-20 6.2E-25 201.4 9.7 194 5-213 21-214 (605)
353 2ca6_A RAN GTPase-activating p 99.8 7.5E-22 2.6E-26 202.4 -1.0 212 1-212 56-319 (386)
354 1w8a_A SLIT protein; signaling 99.8 1.2E-19 4.2E-24 166.5 13.1 176 32-213 11-187 (192)
355 3cvr_A Invasion plasmid antige 99.8 1.4E-19 4.8E-24 192.3 15.2 163 4-191 79-248 (571)
356 4ay9_X Follicle-stimulating ho 99.8 8E-20 2.7E-24 184.5 12.6 206 1-211 50-260 (350)
357 3goz_A Leucine-rich repeat-con 99.8 4E-21 1.4E-25 195.1 2.9 204 4-207 21-264 (362)
358 1zth_A RIO1 serine protein kin 99.8 1.1E-19 3.7E-24 175.0 12.2 137 293-441 49-219 (258)
359 2ast_B S-phase kinase-associat 99.8 4.7E-21 1.6E-25 192.6 2.6 179 5-184 70-258 (336)
360 1xeu_A Internalin C; cellular 99.8 1.1E-19 3.8E-24 175.5 11.0 149 3-164 39-187 (263)
361 1w8a_A SLIT protein; signaling 99.8 1.5E-19 5.2E-24 165.8 11.0 175 8-190 11-187 (192)
362 1dce_A Protein (RAB geranylger 99.8 4.7E-22 1.6E-26 212.5 -6.8 184 2-192 346-552 (567)
363 3g06_A SSPH2 (leucine-rich rep 99.8 1.3E-18 4.3E-23 187.3 18.4 54 149-209 221-274 (622)
364 3goz_A Leucine-rich repeat-con 99.8 2.3E-20 7.7E-25 189.5 2.1 201 9-209 2-238 (362)
365 2ell_A Acidic leucine-rich nuc 99.8 9.7E-19 3.3E-23 156.9 11.3 133 29-163 24-161 (168)
366 1jl5_A Outer protein YOPM; leu 99.8 1.1E-18 3.7E-23 182.1 12.2 78 101-186 131-208 (454)
367 4b8c_D Glucose-repressible alc 99.8 2.6E-19 8.9E-24 197.3 7.3 182 5-192 173-360 (727)
368 3g06_A SSPH2 (leucine-rich rep 99.8 1.4E-17 4.8E-22 179.2 19.0 176 6-209 62-254 (622)
369 2ell_A Acidic leucine-rich nuc 99.8 2.9E-18 1E-22 153.7 10.7 132 5-138 24-160 (168)
370 2wfh_A SLIT homolog 2 protein 99.7 5.6E-18 1.9E-22 155.3 12.5 128 32-163 13-140 (193)
371 1jl5_A Outer protein YOPM; leu 99.7 3E-17 1E-21 171.2 19.3 161 5-187 131-291 (454)
372 4b8c_D Glucose-repressible alc 99.7 9.5E-19 3.3E-23 192.8 8.1 161 12-183 208-369 (727)
373 2je0_A Acidic leucine-rich nuc 99.7 2.6E-18 9E-23 150.7 9.3 127 29-157 17-148 (149)
374 2wfh_A SLIT homolog 2 protein 99.7 1.8E-17 6.2E-22 151.9 13.0 127 8-138 13-139 (193)
375 2je0_A Acidic leucine-rich nuc 99.7 5.3E-18 1.8E-22 148.7 8.8 127 5-133 17-148 (149)
376 2o6r_A Variable lymphocyte rec 99.7 2.3E-17 8E-22 149.2 13.3 111 53-163 28-138 (177)
377 1z7x_W Ribonuclease inhibitor; 99.7 2.4E-19 8.3E-24 188.2 -1.2 206 3-208 168-410 (461)
378 1z7x_W Ribonuclease inhibitor; 99.7 4.5E-20 1.5E-24 193.8 -7.2 206 4-209 141-383 (461)
379 1dce_A Protein (RAB geranylger 99.7 2.7E-19 9.3E-24 191.1 -2.7 174 2-180 369-567 (567)
380 2o6r_A Variable lymphocyte rec 99.7 6.1E-17 2.1E-21 146.4 12.9 131 7-140 9-139 (177)
381 4gyi_A RIO2 kinase; protein ki 99.7 1.8E-17 6.1E-22 165.4 9.5 136 293-442 97-266 (397)
382 1a9n_A U2A', U2A'; complex (nu 99.7 1.9E-17 6.6E-22 149.5 8.8 135 24-163 14-154 (176)
383 3sb4_A Hypothetical leucine ri 99.7 6.6E-17 2.3E-21 161.6 11.2 185 4-191 48-315 (329)
384 1ds9_A Outer arm dynein; leuci 99.7 3E-19 1E-23 164.8 -6.0 152 28-186 17-185 (198)
385 1a9n_A U2A', U2A'; complex (nu 99.7 5.2E-17 1.8E-21 146.7 8.6 129 4-137 18-152 (176)
386 1ds9_A Outer arm dynein; leuci 99.7 8.5E-19 2.9E-23 161.7 -5.5 153 4-163 17-186 (198)
387 3sb4_A Hypothetical leucine ri 99.6 3E-16 1E-20 156.8 7.0 205 4-212 24-313 (329)
388 2r9u_A Variable lymphocyte rec 99.6 3.4E-15 1.2E-19 134.1 11.2 104 8-114 15-118 (174)
389 3g39_A Variable lymphocyte rec 99.6 4.4E-15 1.5E-19 133.0 11.6 104 8-114 12-115 (170)
390 3g39_A Variable lymphocyte rec 99.6 8.3E-15 2.8E-19 131.2 11.0 105 31-138 11-115 (170)
391 2r9u_A Variable lymphocyte rec 99.6 1.6E-14 5.4E-19 129.8 11.2 104 32-138 15-118 (174)
392 4fdw_A Leucine rich hypothetic 99.5 1.6E-13 5.5E-18 140.1 14.1 192 6-206 158-355 (401)
393 3un9_A NLR family member X1; l 99.5 2.5E-16 8.5E-21 159.4 -7.3 158 29-186 72-252 (372)
394 3ogk_B Coronatine-insensitive 99.5 1.6E-15 5.5E-20 164.4 -1.9 184 3-187 291-527 (592)
395 2ifg_A High affinity nerve gro 99.4 2.3E-13 7.9E-18 136.9 11.2 104 8-114 11-116 (347)
396 2ifg_A High affinity nerve gro 99.4 1.6E-13 5.3E-18 138.2 9.3 104 32-138 11-116 (347)
397 3ogk_B Coronatine-insensitive 99.4 3.2E-14 1.1E-18 154.1 3.8 173 7-181 140-326 (592)
398 3un9_A NLR family member X1; l 99.4 3.4E-15 1.2E-19 151.1 -4.1 169 4-172 71-262 (372)
399 4fdw_A Leucine rich hypothetic 99.4 1.3E-12 4.6E-17 133.3 13.8 172 6-186 136-312 (401)
400 3tm0_A Aminoglycoside 3'-phosp 99.4 6.3E-13 2.2E-17 128.1 10.6 147 287-440 10-213 (263)
401 2p1m_B Transport inhibitor res 99.3 4.8E-14 1.6E-18 152.8 -2.6 204 3-208 287-518 (594)
402 2p1m_B Transport inhibitor res 99.3 1.7E-13 5.8E-18 148.5 -0.9 154 3-157 64-243 (594)
403 1nd4_A Aminoglycoside 3'-phosp 99.3 5.1E-12 1.8E-16 121.5 8.0 142 287-440 16-214 (264)
404 2ra8_A Uncharacterized protein 99.1 1.1E-11 3.6E-16 124.3 3.1 63 124-186 251-320 (362)
405 3dxp_A Putative acyl-COA dehyd 99.1 3.2E-10 1.1E-14 114.4 10.6 143 294-440 41-248 (359)
406 2ra8_A Uncharacterized protein 99.1 5.1E-11 1.7E-15 119.4 4.6 177 3-184 137-341 (362)
407 3sg8_A APH(2'')-ID; antibiotic 99.0 1E-10 3.5E-15 115.1 4.7 188 296-494 25-288 (304)
408 3r70_A Aminoglycoside phosphot 98.8 4.4E-08 1.5E-12 96.9 13.1 136 292-440 38-237 (320)
409 4gt6_A Cell surface protein; l 98.8 4.7E-08 1.6E-12 99.8 13.5 106 96-206 260-367 (394)
410 4fs7_A Uncharacterized protein 98.8 2.1E-08 7.3E-13 102.3 10.9 175 1-183 158-353 (394)
411 1io0_A Tropomodulin; LRR prote 98.7 1.1E-09 3.8E-14 99.0 0.1 92 23-114 30-136 (185)
412 4fs7_A Uncharacterized protein 98.7 5.1E-08 1.8E-12 99.5 12.4 159 20-186 153-332 (394)
413 1io0_A Tropomodulin; LRR prote 98.7 1.4E-09 4.9E-14 98.2 0.5 113 2-114 33-164 (185)
414 4gkh_A Aminoglycoside 3'-phosp 98.7 2.2E-07 7.5E-12 89.4 14.3 136 297-440 30-223 (272)
415 3rw6_A Nuclear RNA export fact 98.7 1.9E-09 6.6E-14 102.3 -1.0 79 99-179 168-257 (267)
416 3rw6_A Nuclear RNA export fact 98.6 2.5E-09 8.5E-14 101.6 -0.5 105 49-155 137-257 (267)
417 4gt6_A Cell surface protein; l 98.6 1.5E-07 5.2E-12 95.9 11.7 111 71-185 259-369 (394)
418 3tdw_A Gentamicin resistance p 98.6 4.1E-07 1.4E-11 89.2 13.0 136 296-440 24-224 (306)
419 4h09_A Hypothetical leucine ri 98.5 6E-07 2.1E-11 91.0 12.8 153 25-182 190-342 (379)
420 4h09_A Hypothetical leucine ri 98.5 6.3E-07 2.2E-11 90.8 12.3 162 5-172 194-355 (379)
421 3ovc_A Hygromycin-B 4-O-kinase 98.5 7.5E-07 2.6E-11 89.4 12.0 77 293-375 43-122 (362)
422 3d1u_A Putative fructosamine-3 98.5 4.8E-07 1.6E-11 87.6 10.2 76 295-374 19-97 (288)
423 3ats_A Putative uncharacterize 98.3 5.8E-07 2E-11 90.3 6.7 80 296-375 25-121 (357)
424 2q83_A YTAA protein; 2635576, 98.1 2.2E-05 7.6E-10 78.0 13.2 138 297-439 38-251 (346)
425 2olc_A MTR kinase, methylthior 98.1 8.2E-06 2.8E-10 83.1 9.9 75 296-372 35-120 (397)
426 3e4g_A ATP synthase subunit S, 98.1 6.5E-07 2.2E-11 78.7 1.3 83 78-160 62-150 (176)
427 3e4g_A ATP synthase subunit S, 98.1 8.5E-07 2.9E-11 78.0 1.8 93 94-186 54-153 (176)
428 3jr1_A Putative fructosamine-3 97.9 0.00011 3.7E-09 71.6 13.1 137 295-436 40-232 (312)
429 2pyw_A Uncharacterized protein 97.8 7.9E-05 2.7E-09 76.3 11.1 80 409-490 231-313 (420)
430 3f7w_A Putative fructosamine-3 97.7 6.7E-05 2.3E-09 72.6 8.9 79 292-374 16-97 (288)
431 3csv_A Aminoglycoside phosphot 97.7 0.00019 6.6E-09 70.9 10.9 139 297-440 24-217 (333)
432 2yle_A Protein spire homolog 1 97.7 0.00023 7.8E-09 64.0 10.1 103 372-492 33-135 (229)
433 3dxq_A Choline/ethanolamine ki 97.6 0.00013 4.3E-09 71.2 8.6 129 295-440 22-202 (301)
434 3rfe_A Platelet glycoprotein I 97.6 8.5E-05 2.9E-09 62.1 6.2 36 54-89 32-67 (130)
435 1pgv_A TMD-1, tropomodulin TMD 97.6 1.5E-05 5.1E-10 71.4 1.4 64 27-90 39-111 (197)
436 1pgv_A TMD-1, tropomodulin TMD 97.6 2.3E-05 7.9E-10 70.2 2.1 109 76-184 40-168 (197)
437 3feg_A Choline/ethanolamine ki 97.5 0.00012 4.1E-09 73.3 7.4 140 296-440 55-254 (379)
438 2ppq_A HSK, HK, homoserine kin 97.5 0.00094 3.2E-08 65.5 12.7 154 284-440 10-217 (322)
439 1nw1_A Choline kinase (49.2 KD 97.4 0.00017 5.8E-09 73.9 7.0 73 296-374 78-159 (429)
440 1zyl_A Hypothetical protein YI 97.4 0.0011 3.8E-08 65.2 11.7 140 297-440 32-223 (328)
441 2qg7_A Ethanolamine kinase PV0 97.2 0.00038 1.3E-08 71.7 7.0 74 296-374 113-188 (458)
442 3i1a_A Spectinomycin phosphotr 97.2 0.0019 6.5E-08 63.8 11.5 71 297-374 27-108 (339)
443 3rfe_A Platelet glycoprotein I 97.2 0.00071 2.4E-08 56.4 6.7 36 78-113 32-67 (130)
444 3c5i_A Choline kinase; choline 97.1 0.00048 1.6E-08 69.1 5.5 74 296-374 38-121 (369)
445 3f2s_A CK, chetk-alpha, cholin 96.9 0.0024 8.2E-08 64.2 8.8 140 297-440 58-280 (401)
446 3mes_A Choline kinase; malaria 96.3 0.0035 1.2E-07 63.6 5.8 74 296-374 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 95.4 0.04 1.4E-06 55.6 8.9 30 411-440 245-280 (401)
448 2jwa_A Receptor tyrosine-prote 91.2 0.11 3.8E-06 33.0 2.1 27 237-264 16-42 (44)
449 2ks1_B Epidermal growth factor 90.7 0.12 4.2E-06 33.0 1.9 26 237-262 15-40 (44)
450 2l2t_A Receptor tyrosine-prote 88.7 0.16 5.3E-06 32.5 1.3 29 236-264 13-41 (44)
451 4ann_A ESSB; membrane protein, 85.5 1.5 5.3E-05 39.2 6.4 120 345-499 43-163 (215)
452 4ano_A ESSB; membrane protein, 82.0 4.4 0.00015 36.4 7.9 116 345-495 48-164 (219)
453 2lz0_A Uncharacterized protein 74.1 7.8 0.00027 29.9 6.3 45 41-86 8-52 (100)
454 2lz0_A Uncharacterized protein 73.9 6.3 0.00022 30.4 5.7 46 16-62 7-52 (100)
455 3cxl_A N-chimerin; SH2, RHO-GA 72.4 0.5 1.7E-05 48.4 -1.3 60 294-356 145-213 (463)
456 2x6h_A GH13170P, VPS34, phosph 67.9 85 0.0029 33.5 14.4 44 389-439 530-575 (696)
457 2k1k_A Ephrin type-A receptor 67.3 0.84 2.9E-05 28.2 -0.6 23 237-259 15-37 (38)
458 3ls8_A Phosphatidylinositol 3- 49.6 2.5E+02 0.0085 29.4 14.7 82 350-439 402-501 (614)
459 1iij_A ERBB-2 receptor protein 49.1 1.1 3.9E-05 26.8 -2.1 18 243-260 17-34 (35)
460 1cja_A Protein (actin-fragmin 43.6 61 0.0021 31.0 7.5 137 295-440 73-237 (342)
461 2knc_A Integrin alpha-IIB; tra 26.7 23 0.00079 23.6 1.1 13 238-250 15-27 (54)
462 2l8s_A Integrin alpha-1; trans 25.4 18 0.00062 24.0 0.4 15 237-251 11-25 (54)
463 2k9y_A Ephrin type-A receptor 23.0 21 0.0007 22.1 0.3 8 243-250 20-27 (41)
464 2klu_A T-cell surface glycopro 20.6 46 0.0016 23.0 1.7 26 239-264 13-39 (70)
465 3eps_A Isocitrate dehydrogenas 20.3 3E+02 0.01 28.1 8.1 144 286-443 305-484 (578)
No 1
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.7e-57 Score=442.22 Aligned_cols=267 Identities=26% Similarity=0.418 Sum_probs=213.5
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
++...+++++.++||+|+||+||+|+++ ..||||+++.. ..+..+.|.+|++++++++|||||++++++.+ +..+
T Consensus 31 Wei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~ 107 (307)
T 3omv_A 31 WEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLA 107 (307)
T ss_dssp CBCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCE
T ss_pred cEEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEE
Confidence 4455678999999999999999999975 36999998654 34556789999999999999999999998864 5689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+|||||++|+|.+++......+++.++..|+.||+.||+||| +++|+||||||+|||+++++.+||+|||+|+....
T Consensus 108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 999999999999999887777899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCcceeeccccCccccCCCCCCC---CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCC-CCCccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSE---GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH-GLPKIA 519 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~-~~~~~~ 519 (581)
...........||+.|||||++.+ +.|+.++|||||||++|||+||+.||...... ......+...... .++.
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-~~~~~~~~~~~~~p~~~~-- 261 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-DQIIFMVGRGYASPDLSK-- 261 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHHHHHTTCCCCCSTT--
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-HHHHHHHhcCCCCCCccc--
Confidence 443334455689999999998753 46899999999999999999999999764222 2222222222111 1111
Q ss_pred cccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 520 DANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
.+.++++.+.+||.+||+.||++|||++||+++|+.++..++
T Consensus 262 ------------~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 262 ------------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp ------------SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred ------------ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 112456778999999999999999999999999998876543
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.6e-57 Score=443.08 Aligned_cols=260 Identities=27% Similarity=0.426 Sum_probs=218.3
Q ss_pred hcCCCcCCeecccccccEEEEEeC------CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS------DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
.++|.+.+.||+|+||.||+|++. +++.||||+++.......+.|.+|++++++++|||||+++|+|.+.+..+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 357888899999999999999853 47889999998877777788999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEE
Q 008012 364 LVLEFMPNGSLDKWLYSHN------------YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAH 431 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~k 431 (581)
+|||||++|+|.+++.+.+ ..+++.+++.|+.||++||+||| +++|+||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEE
Confidence 9999999999999998642 45899999999999999999999 89999999999999999999999
Q ss_pred EeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhh
Q 008012 432 VSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKES 510 (581)
Q Consensus 432 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~ 510 (581)
|+|||+|+...............||+.|+|||++.+..|+.++|||||||++|||+| |+.||...... .+...+...
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~~ 246 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECITQG 246 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHHT
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcC
Confidence 999999987654433333344568999999999999999999999999999999999 89999874322 222333322
Q ss_pred CCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
..... +..+++++.+||.+||+.||++|||++||.+.|+++.+.
T Consensus 247 ~~~~~-----------------p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 247 RVLQR-----------------PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCC-----------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCC-----------------CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 21111 124566789999999999999999999999999988654
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.4e-56 Score=444.17 Aligned_cols=258 Identities=26% Similarity=0.414 Sum_probs=210.6
Q ss_pred cCCCcCCeecccccccEEEEEeC------CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS------DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
++|.+.++||+|+||.||+|+++ +++.||||+++.......+.|.+|++++++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 56777889999999999999864 478899999988777777889999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcE
Q 008012 365 VLEFMPNGSLDKWLYSHN--------------YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVA 430 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~ 430 (581)
|||||++|+|.+++.+.. ..+++.+++.|+.||++||+||| +++|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999998542 34789999999999999999999 8999999999999999999999
Q ss_pred EEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHh
Q 008012 431 HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKE 509 (581)
Q Consensus 431 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~ 509 (581)
||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.||...... .....+..
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~ 275 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCITQ 275 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHHHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc
Confidence 9999999987755444444455679999999999999999999999999999999999 89999864322 22233333
Q ss_pred hCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHH
Q 008012 510 SLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570 (581)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 570 (581)
...... +..+++++.+||.+||+.||++|||++||+++|+.+.+
T Consensus 276 g~~~~~-----------------p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 276 GRELER-----------------PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp TCCCCC-----------------CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCCC-----------------cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 221111 12456678999999999999999999999999999865
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.2e-56 Score=437.49 Aligned_cols=256 Identities=25% Similarity=0.420 Sum_probs=212.7
Q ss_pred cCCCcCCeecccccccEEEEEeC------CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS------DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
.++++.++||+|+||.||+|.+. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|.+.+..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 44567789999999999999863 46889999997543 334567999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC
Q 008012 364 LVLEFMPNGSLDKWLYSHN---------------YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM 428 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~ 428 (581)
+|||||++|+|.+++.... ..+++..++.|+.||++||+||| +++|+||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 9999999999999997532 34789999999999999999999 89999999999999999999
Q ss_pred cEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHH
Q 008012 429 VAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWV 507 (581)
Q Consensus 429 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~ 507 (581)
.+||+|||+|+.....+.........||+.|+|||++.++.|+.++|||||||++|||+| |+.||..... ..+...+
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~~~~i 260 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVVEMI 260 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHHHHHH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH
Confidence 999999999987654443333455679999999999999999999999999999999999 8999986432 2233333
Q ss_pred HhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHh
Q 008012 508 KESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568 (581)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 568 (581)
....... .+.+|++.+.+||.+||+.||++|||++||+++|+++
T Consensus 261 ~~~~~~~-----------------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 261 RNRQVLP-----------------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HTTCCCC-----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HcCCCCC-----------------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 3221111 1224667789999999999999999999999999865
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.7e-55 Score=437.70 Aligned_cols=251 Identities=22% Similarity=0.338 Sum_probs=205.1
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
.++|++++.||+|+||.||+|+.. +|+.||||+++.. .....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 478999999999999999999965 7999999999754 3455678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 367 EFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 367 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||+||+|.+++... +..+++..++.|+.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.+...
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST- 178 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC-
Confidence 999999999999855 345688999999999999999999 899999999999999999999999999999876321
Q ss_pred CcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchh
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR 525 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (581)
........||+.|+|||++.+..|+.++|||||||++|||+||++||...... ..+........ +..
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~~~----~~~------- 245 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-NLVLKIISGSF----PPV------- 245 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTCC----CCC-------
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCC----CCC-------
Confidence 11234457999999999999999999999999999999999999999763211 11122222111 111
Q ss_pred hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 526 EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 526 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+..+++++.+||.+||..||++|||++|+++|
T Consensus 246 -------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 246 -------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -------CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11245568899999999999999999999986
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.8e-55 Score=435.50 Aligned_cols=250 Identities=22% Similarity=0.299 Sum_probs=212.8
Q ss_pred cCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEecc
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFM 369 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 369 (581)
+.|++.++||+|+||.||+|+++ +|+.||||+++.......+.+.+|++++++++|||||++++++.+.+..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56899999999999999999965 79999999997665444567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCcce
Q 008012 370 PNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVI 449 (581)
Q Consensus 370 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 449 (581)
+||+|.+++.+. .+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.+..... .
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--C
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--c
Confidence 999999999864 3799999999999999999999 89999999999999999999999999999998754322 2
Q ss_pred eeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhhhhh
Q 008012 450 QTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENF 529 (581)
Q Consensus 450 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (581)
.....||+.|+|||++.+..|+.++|||||||++|||++|++||... ........+....+..++
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~~~------------- 291 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRLK------------- 291 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSSCCCCS-------------
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCCCC-------------
Confidence 34568999999999999999999999999999999999999999763 222223333333222211
Q ss_pred hhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 530 FSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 530 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
....+++++.+||.+||..||++|||++|+++|
T Consensus 292 --~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 292 --NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp --CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 112345678899999999999999999999986
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4e-55 Score=427.84 Aligned_cols=250 Identities=22% Similarity=0.300 Sum_probs=211.6
Q ss_pred cCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEE
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
++|++.+.||+|+||+||+|+.+ +|+.||+|++.+.. ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999965 89999999997653 233567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 446 (581)
|||+||+|.+++.+.+. +++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~~-l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGS-FDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 99999999999987654 799999999999999999999 89999999999999999999999999999998765444
Q ss_pred cceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhh
Q 008012 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526 (581)
Q Consensus 447 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (581)
.......+||+.|+|||++.+..|+.++||||+||++|||+||++||.... ...+...+.... ..+++
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~-~~~p~--------- 255 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--EGLIFAKIIKLE-YDFPE--------- 255 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTC-CCCCT---------
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCC-CCCCc---------
Confidence 444556789999999999999999999999999999999999999997632 122222222211 11111
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 527 ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 527 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+++++.+||.+||..||++|||++|++.+
T Consensus 256 --------~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 256 --------KFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp --------TCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred --------ccCHHHHHHHHHHccCCHhHCcChHHHcCC
Confidence 234567899999999999999999997554
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5e-55 Score=432.45 Aligned_cols=259 Identities=19% Similarity=0.223 Sum_probs=212.2
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
..+.|++.++||+|+||.||+|+++ +|+.||||+++.+.. ..+|+.++++++|||||++++++.+.+..|+|||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 3456888899999999999999965 799999999976532 2469999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-cEEEeeccCceecCCCCC
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM-VAHVSDFGISKLLGEGDD 446 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~-~~kl~Dfg~a~~~~~~~~ 446 (581)
||+||+|.+++.+.+. +++..+..++.||+.||+||| ++||+||||||+|||++.++ ++||+|||+|+.+.....
T Consensus 131 y~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 131 LLEGGSLGQLIKQMGC-LPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp CCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred ccCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 9999999999987654 799999999999999999999 89999999999999999887 699999999998754322
Q ss_pred cc---eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 447 SV---IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 447 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
.. ......||+.|||||++.+..|+.++|||||||++|||+||++||....... ......... + ..
T Consensus 207 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~-~-~~-------- 275 (336)
T 4g3f_A 207 GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIASEP-P-PI-------- 275 (336)
T ss_dssp -------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHHHSC-C-GG--------
T ss_pred ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHcCC-C-Cc--------
Confidence 11 2233579999999999999999999999999999999999999998743332 222222211 0 00
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
...+..+++.+.++|.+||..||++|||+.|++++|..+..+..
T Consensus 276 ------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 276 ------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp ------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhh
Confidence 01122456678899999999999999999999999988876543
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.3e-54 Score=416.78 Aligned_cols=245 Identities=24% Similarity=0.367 Sum_probs=199.2
Q ss_pred CcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeec----CCeeeEEE
Q 008012 294 NECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCN----TNFKALVL 366 (581)
Q Consensus 294 ~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~lv~ 366 (581)
++.++||+|+||.||+|.+. +++.||+|++... .....+.+.+|++++++++|||||++++++.+ .+..|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 55678999999999999965 7899999999654 34456789999999999999999999999865 34689999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecC-CCcEEEeeccCceecCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP--VVHCDLKPSNILLDE-NMVAHVSDFGISKLLGE 443 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dikp~Nill~~-~~~~kl~Dfg~a~~~~~ 443 (581)
|||+||+|.+++.+.+ .+++..+..++.||+.||+||| +++ |+||||||+|||++. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999998754 4799999999999999999999 777 999999999999984 79999999999986432
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
. ......||+.|||||++.+ .|+.++|||||||++|||+||++||..... .............+...+
T Consensus 185 ~----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~----~~~~~~~i~~~~~~~~~~--- 252 (290)
T 3fpq_A 185 S----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSGVKPASFD--- 252 (290)
T ss_dssp T----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTTCCCGGGG---
T ss_pred C----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc----HHHHHHHHHcCCCCCCCC---
Confidence 2 2345689999999998875 699999999999999999999999975322 222222222111111111
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..+++++.+||.+||..||++|||++|+++|
T Consensus 253 ----------~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 253 ----------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ----------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ----------ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1234568899999999999999999999876
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=5e-54 Score=436.91 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=213.1
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEec
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEF 368 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 368 (581)
.+.|++.+.||+|+||.||+|+.+ +|+.||||++........+.+.+|+.+|++++|||||+++++|.+.+..|+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 357999999999999999999965 7999999999766544456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCcc
Q 008012 369 MPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448 (581)
Q Consensus 369 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 448 (581)
|+||+|.+++.... +++..+..++.||+.||+||| ++||+||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 230 ~~gG~L~~~i~~~~--l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~-- 302 (423)
T 4fie_A 230 LEGGALTDIVTHTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-- 302 (423)
T ss_dssp CTTEEHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--
T ss_pred CCCCcHHHHHhccC--CCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--
Confidence 99999999997653 799999999999999999999 89999999999999999999999999999998754322
Q ss_pred eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhhhh
Q 008012 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREEN 528 (581)
Q Consensus 449 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (581)
.....+||+.|||||++.+..|+.++|||||||++|||++|++||... ........+....+..+..
T Consensus 303 ~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~--~~~~~~~~i~~~~~~~~~~----------- 369 (423)
T 4fie_A 303 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPRLKN----------- 369 (423)
T ss_dssp CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS--CHHHHHHHHHHSCCCCCSC-----------
T ss_pred cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc--CHHHHHHHHHcCCCCCCcc-----------
Confidence 234568999999999999999999999999999999999999999763 2222233333332222111
Q ss_pred hhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 529 FFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 529 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...+++++.+||.+||..||++|||++|+++|
T Consensus 370 ----~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 370 ----LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp ----TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----cccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11345578899999999999999999999986
No 11
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6.3e-54 Score=430.04 Aligned_cols=268 Identities=26% Similarity=0.380 Sum_probs=222.6
Q ss_pred hhhHHHhhcCCCcCCeecccccccEEEEEeC------CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCC-CccceEee
Q 008012 283 YLDLERATDGFNECNLLGSGGFGSVYKGILS------DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRH-RNLIKILS 354 (581)
Q Consensus 283 ~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h-~~iv~~~~ 354 (581)
...++...++|++.+.||+|+||.||+|.+. +++.||||.++... ....+.+.+|++++.+++| ||||+++|
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEE
Confidence 3456677789999999999999999999854 23579999997653 4456789999999999965 99999999
Q ss_pred eeecC-CeeeEEEeccCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCC
Q 008012 355 SCCNT-NFKALVLEFMPNGSLDKWLYSH---------------NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418 (581)
Q Consensus 355 ~~~~~-~~~~lv~e~~~~~~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dik 418 (581)
+|... +..++|||||++|+|.+++++. ...+++..+..++.|||+||+||| +++|+|||||
T Consensus 136 ~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK 212 (353)
T 4ase_A 136 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLA 212 (353)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred EEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccC
Confidence 98664 5789999999999999999853 234789999999999999999999 8999999999
Q ss_pred CCCeEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccc
Q 008012 419 PSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMF 497 (581)
Q Consensus 419 p~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~ 497 (581)
|+|||+++++.+||+|||+|+.+.............||+.|||||++.+..|+.++|||||||++|||+| |+.||....
T Consensus 213 ~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~ 292 (353)
T 4ase_A 213 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 292 (353)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999998765555445556679999999999999999999999999999999998 999997643
Q ss_pred cccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 498 TGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
.. ..+...+........+ ..+++++.++|.+||+.||++|||++||+++|+++.+.
T Consensus 293 ~~-~~~~~~i~~g~~~~~p-----------------~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 293 ID-EEFCRRLKEGTRMRAP-----------------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CS-HHHHHHHHHTCCCCCC-----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HH-HHHHHHHHcCCCCCCC-----------------ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 22 2233334333222222 23456788999999999999999999999999998754
No 12
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-53 Score=411.16 Aligned_cols=246 Identities=25% Similarity=0.385 Sum_probs=193.6
Q ss_pred cCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEE
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
++|++.+.||+|+||.||+|... +|+.||+|+++... ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 68999999999999999999964 79999999997543 233467899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 446 (581)
||+ +|+|.+++.+.+. +++..+..++.||+.||+||| ++||+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~~~-l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHHSCS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 999 6799999987654 799999999999999999999 8999999999999999999999999999998764322
Q ss_pred cceeeccccCccccCCCCCCCCCC-CccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchh
Q 008012 447 SVIQTMTIATIGYMAPEFGSEGNV-SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR 525 (581)
Q Consensus 447 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (581)
......||+.|+|||++.+..+ +.++||||+||++|||+||+.||.... ...+...+..... .++.
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--~~~~~~~i~~~~~-~~p~-------- 233 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--IPVLFKNISNGVY-TLPK-------- 233 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCC-CCCT--------
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHcCCC-CCCC--------
Confidence 2345679999999999988876 579999999999999999999997632 1122222222111 1111
Q ss_pred hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 526 EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 526 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+++++.+||.+||+.||++|||++|+++|
T Consensus 234 ---------~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 234 ---------FLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---------TSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ---------CCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 234567899999999999999999999986
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.8e-52 Score=413.51 Aligned_cols=270 Identities=21% Similarity=0.306 Sum_probs=204.9
Q ss_pred hcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCC----eeeEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN----FKALV 365 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~lv 365 (581)
..+|.+.++||+|+||+||+|++. |+.||||+++...... .....|+..+.+++|||||++++++.+.+ ..++|
T Consensus 2 ar~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~~-~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERS-WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred CcEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchhh-HHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 346778899999999999999985 8999999997664332 23345666677889999999999997654 57999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG-----HSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
||||++|+|.+++.... ++++.+.+++.|++.||+|||+. +..+|+||||||+|||++.++++||+|||+|+.
T Consensus 80 ~Ey~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred ecCCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 99999999999998754 68999999999999999999932 123999999999999999999999999999987
Q ss_pred cCCCCCcc--eeeccccCccccCCCCCCCC------CCCccccHHHHHHHHHHHHhCCCCCCcccc----------cccc
Q 008012 441 LGEGDDSV--IQTMTIATIGYMAPEFGSEG------NVSSKCDVYSYGILLLETFTRKKPTDEMFT----------GEMN 502 (581)
Q Consensus 441 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~----------~~~~ 502 (581)
........ ......||+.|+|||++.+. .++.++|||||||++|||+||++||..... ....
T Consensus 158 ~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred ccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 75443321 22345799999999988654 467899999999999999999887654222 1122
Q ss_pred HHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 503 LKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
.............. +.+ +......++++.+.+||.+||+.||++||||.||++.|+++.++
T Consensus 238 ~~~~~~~~~~~~~r----p~~----p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 238 VEEMRKVVCEQKLR----PNI----PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHTTSCCC----CCC----CGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhcccCC----CCC----CccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 22222222211111 111 11112235667889999999999999999999999999998653
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.7e-53 Score=415.04 Aligned_cols=248 Identities=25% Similarity=0.300 Sum_probs=198.2
Q ss_pred cCCCcCCeecccccccEEEEEeC----CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS----DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
++|++++.||+|+||+||+|+.. +++.||+|+++... ......+.+|++++++++|||||++++++.+.+..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999852 57899999996542 1122357789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
|||||+||+|.+++.+.+. +++.++..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~~-l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVM-FTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 9999999999999987654 799999999999999999999 899999999999999999999999999999865332
Q ss_pred CCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
.. ......||+.|+|||++.+..|+.++||||+||++|||+||++||..... ......+..... .++
T Consensus 180 ~~--~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~--~~~~~~i~~~~~-~~p-------- 246 (304)
T 3ubd_A 180 EK--KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR--KETMTMILKAKL-GMP-------- 246 (304)
T ss_dssp -C--CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-CCC--------
T ss_pred Cc--cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH--HHHHHHHHcCCC-CCC--------
Confidence 22 23456799999999999999999999999999999999999999976322 122222222111 111
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCH-----HHHHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYM-----KDAATK 564 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~ 564 (581)
..+++++.+||.+||+.||++|||+ +|+++|
T Consensus 247 ---------~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 247 ---------QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ---------TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ---------CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 1234568899999999999999985 677765
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.2e-51 Score=405.52 Aligned_cols=250 Identities=24% Similarity=0.382 Sum_probs=191.8
Q ss_pred cCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCC--------
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN-------- 360 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-------- 360 (581)
++|++++.||+|+||.||+|+.+ +|+.||||+++... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 46899999999999999999965 79999999997543 445567899999999999999999999986544
Q ss_pred ----eeeEEEeccCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEee
Q 008012 361 ----FKALVLEFMPNGSLDKWLYSHNY--FQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSD 434 (581)
Q Consensus 361 ----~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~D 434 (581)
..|+|||||++|+|.+++..... ..++..++.++.||++||+||| ++||+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999986543 2355678899999999999999 89999999999999999999999999
Q ss_pred ccCceecCCCCCc----------ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHH
Q 008012 435 FGISKLLGEGDDS----------VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLK 504 (581)
Q Consensus 435 fg~a~~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~ 504 (581)
||+|+.+...... ...+...||+.|||||++.+..|+.++|||||||++|||++ ||.... ...
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----~~~ 234 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----ERV 234 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----HHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----HHH
Confidence 9999876543221 11234579999999999999999999999999999999996 775421 111
Q ss_pred HHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 505 NWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..+........+ +...+.++.+.+||.+||+.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~~~p--------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 235 RTLTDVRNLKFP--------------PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HHHHHHHTTCCC--------------HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhcCCCC--------------CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 112211111111 1122334556789999999999999999999985
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-49 Score=404.52 Aligned_cols=268 Identities=22% Similarity=0.261 Sum_probs=205.5
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeec------CC
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCN------TN 360 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~ 360 (581)
.++|++++.||+|+||.||+|.+. +|+.||||+++... ....+.+.+|+++|++++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 468999999999999999999965 89999999997542 3445678899999999999999999998754 35
Q ss_pred eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..|+|||||+ |+|.+++.+.+ .+++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 7899999996 68999998655 4899999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCC--CcceeeccccCccccCCCCCCCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCc
Q 008012 441 LGEGD--DSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPK 517 (581)
Q Consensus 441 ~~~~~--~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 517 (581)
+.... .........||+.|+|||++.+. .++.++||||+||++|||++|++||.+.. .......+..........
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~--~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN--YVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS--HHHHHHHHHHHHCCCCGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC--HHHHHHHHHHhcCCCChH
Confidence 64322 12233456899999999987775 56999999999999999999999997632 222222222221111111
Q ss_pred cccc----cchhh---------hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 518 IADA----NLLRE---------ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 518 ~~~~----~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.... ..... .+.......+++++.+||.+||..||++|||++|+++|
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 1000 00000 00001112345678899999999999999999999986
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.6e-49 Score=400.91 Aligned_cols=271 Identities=17% Similarity=0.234 Sum_probs=204.1
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEeC----CCcEEEEEEeccchHHHHHHHHHHHHHHHhc-CCCccceEeeeeecC
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGILS----DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRNLIKILSSCCNT 359 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~ 359 (581)
.+....++|++.+.||+|+||+||+|+.+ +++.||+|.+...... ..+.+|+++++.+ +||||+++++++.+.
T Consensus 15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~--~~~~~E~~~l~~~~~h~nIv~l~~~~~~~ 92 (361)
T 4f9c_A 15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHP--IRIAAELQCLTVAGGQDNVMGVKYCFRKN 92 (361)
T ss_dssp HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCH--HHHHHHHHHHHHTCSBTTBCCCSEEEEET
T ss_pred hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCH--HHHHHHHHHHHHhcCCCCCceEEEEEEEC
Confidence 34456789999999999999999999853 5788999998665432 4678899999999 699999999999999
Q ss_pred CeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-CcEEEeeccCc
Q 008012 360 NFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDEN-MVAHVSDFGIS 438 (581)
Q Consensus 360 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~-~~~kl~Dfg~a 438 (581)
++.|+||||++||+|.+++. .+++.++..++.||+.||+||| ++||+||||||+|||++.+ +.+||+|||+|
T Consensus 93 ~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 93 DHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp TEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 99999999999999999984 3789999999999999999999 8999999999999999876 79999999999
Q ss_pred eecCCCCCc--------------------------ceeeccccCccccCCCCCCCC-CCCccccHHHHHHHHHHHHhCCC
Q 008012 439 KLLGEGDDS--------------------------VIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKK 491 (581)
Q Consensus 439 ~~~~~~~~~--------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~ 491 (581)
+........ .......||+.|+|||++.+. .|+.++||||+||++|||++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 865432211 112334799999999988775 58999999999999999999999
Q ss_pred CCCccccccccHHHHHHhh-----------CC------CCCCccc------------------cccchhhhhhhhHHHHH
Q 008012 492 PTDEMFTGEMNLKNWVKES-----------LP------HGLPKIA------------------DANLLREENFFSARMDC 536 (581)
Q Consensus 492 Pf~~~~~~~~~~~~~~~~~-----------~~------~~~~~~~------------------~~~~~~~~~~~~~~~~~ 536 (581)
||....+....+.....-. .. ...+... .................
T Consensus 246 Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~i 325 (361)
T 4f9c_A 246 PFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEV 325 (361)
T ss_dssp SSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTC
T ss_pred CCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccC
Confidence 9965433222222211100 00 0000000 00000000001112235
Q ss_pred HHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 537 LLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 537 ~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
++++.+|+.+||..||++|||++|+++|
T Consensus 326 s~~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 326 PDEAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred CHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 6678899999999999999999999876
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4e-48 Score=414.18 Aligned_cols=253 Identities=22% Similarity=0.255 Sum_probs=213.7
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEec
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEF 368 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 368 (581)
.++|++.+.||+|+||.||+|..+ +|+.||+|++........+.+.+|+++|+.++|||||++++++.+.+..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 468999999999999999999965 8999999999877666667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC--CcEEEeeccCceecCCCCC
Q 008012 369 MPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDEN--MVAHVSDFGISKLLGEGDD 446 (581)
Q Consensus 369 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~--~~~kl~Dfg~a~~~~~~~~ 446 (581)
|+||+|.+++.+....+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999876666899999999999999999999 8999999999999999854 899999999999875432
Q ss_pred cceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhh
Q 008012 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526 (581)
Q Consensus 447 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (581)
......||+.|+|||++.+..|+.++||||+||++|||++|++||...... .....+..... .++.
T Consensus 312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--~~~~~i~~~~~-~~~~--------- 377 (573)
T 3uto_A 312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETLRNVKSCDW-NMDD--------- 377 (573)
T ss_dssp --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHTTCC-CCCS---------
T ss_pred --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHhCCC-CCCc---------
Confidence 234557999999999999999999999999999999999999999763221 11122221111 1111
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 527 ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 527 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.....+++.+.+||.+||..||++|||+.|+++|
T Consensus 378 ----~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 378 ----SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp ----GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----ccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112345668899999999999999999999986
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.8e-48 Score=408.95 Aligned_cols=249 Identities=23% Similarity=0.305 Sum_probs=203.4
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch------HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL------EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNF 361 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 361 (581)
..++|++++.||+|+||.||+|+.+ +|+.||+|++++.. .........++.+++.++|||||+++++|.+.+.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 3478999999999999999999965 79999999997543 1122233345667777899999999999999999
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceec
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
.|+|||||+||+|.+++.+.+. +++..+..++.||+.||+||| ++||+||||||+|||++.+|.+||+|||+|+.+
T Consensus 267 lylVmEy~~GGdL~~~l~~~~~-l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHGV-FSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 9999999999999999987654 799999999999999999999 999999999999999999999999999999987
Q ss_pred CCCCCcceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhh--CCCCCCcc
Q 008012 442 GEGDDSVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES--LPHGLPKI 518 (581)
Q Consensus 442 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~ 518 (581)
.... ....+||+.|+|||++.+ ..|+.++||||+||++|||++|++||...... ......... ....++.
T Consensus 343 ~~~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~--~~~~i~~~i~~~~~~~p~- 415 (689)
T 3v5w_A 343 SKKK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMTLTMAVELPD- 415 (689)
T ss_dssp SSCC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC--CHHHHHHHHHHCCCCCCT-
T ss_pred CCCC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHhhcCCCCCCCc-
Confidence 5432 234589999999999864 57999999999999999999999999763222 122222211 1111111
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCC-----HHHHHHH
Q 008012 519 ADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLY-----MKDAATK 564 (581)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 564 (581)
.+++++.+||.+||..||++|++ ++||++|
T Consensus 416 ----------------~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 416 ----------------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp ----------------TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred ----------------cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 23456889999999999999998 6888776
No 20
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.1e-46 Score=377.75 Aligned_cols=284 Identities=36% Similarity=0.572 Sum_probs=233.8
Q ss_pred ccchhhhHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeec
Q 008012 279 RRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358 (581)
Q Consensus 279 ~~~~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 358 (581)
.+.++.++....++|++.+.||+|+||.||+|..++++.||+|++........+.+.+|++++++++||||+++++++.+
T Consensus 27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred eeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 34556677788999999999999999999999988899999999887665566789999999999999999999999999
Q ss_pred CCeeeEEEeccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeec
Q 008012 359 TNFKALVLEFMPNGSLDKWLYSHN---YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDF 435 (581)
Q Consensus 359 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Df 435 (581)
.+..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeec
Confidence 999999999999999999997543 34789999999999999999999 899999999999999999999999999
Q ss_pred cCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-ccHHHHHHhh-CCC
Q 008012 436 GISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE-MNLKNWVKES-LPH 513 (581)
Q Consensus 436 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~-~~~~~~~~~~-~~~ 513 (581)
|++................|++.|+|||++.+..++.++||||||+++|||++|+.||....... .....|.... ...
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 263 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT
T ss_pred ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc
Confidence 99987654333333344568999999999988899999999999999999999999997654332 2333333222 222
Q ss_pred CCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHH
Q 008012 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570 (581)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 570 (581)
.+....++.... ....+++..+.+++.+||+.||++|||++|++++|+.+.+
T Consensus 264 ~~~~~~~~~~~~-----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 264 QLEQIVDPNLAD-----KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CCCSSSSSSCTT-----CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cHHHhcChhhcc-----ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 233444433322 1224677889999999999999999999999999998864
No 21
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.3e-46 Score=373.55 Aligned_cols=261 Identities=25% Similarity=0.413 Sum_probs=220.2
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEec
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEF 368 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 368 (581)
.++|.+.+.||+|+||.||+|.+. +++.||+|.+........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 467889999999999999999965 7999999998777777778899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCcc
Q 008012 369 MPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448 (581)
Q Consensus 369 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 448 (581)
+++++|.+++......+++.+++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++..........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999987777899999999999999999999 8999999999999999999999999999998764332211
Q ss_pred ------------eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccc----cHHHHHHhhCC
Q 008012 449 ------------IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM----NLKNWVKESLP 512 (581)
Q Consensus 449 ------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~----~~~~~~~~~~~ 512 (581)
......||+.|+|||++.+..++.++||||||+++|||++|..||........ ..........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~- 244 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYC- 244 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTC-
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccC-
Confidence 11145689999999999999999999999999999999999999876433221 1111111111
Q ss_pred CCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 513 HGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
+..+++.+.+++.+||+.||++|||+.|+++.|++++.....
T Consensus 245 --------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 245 --------------------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp --------------------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 123445688999999999999999999999999999887654
No 22
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.1e-45 Score=377.06 Aligned_cols=264 Identities=26% Similarity=0.418 Sum_probs=218.5
Q ss_pred hhcCCCcCCeecccccccEEEEEeC--------CCcEEEEEEeccch-HHHHHHHHHHHHHHHhc-CCCccceEeeeeec
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS--------DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNV-RHRNLIKILSSCCN 358 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~ 358 (581)
..++|++.+.||+|+||.||+|.+. ++..||+|+++... ....+.+.+|+++++++ +||||+++++++.+
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 4578999999999999999999852 35679999997653 44567899999999999 89999999999999
Q ss_pred CCeeeEEEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeE
Q 008012 359 TNFKALVLEFMPNGSLDKWLYSHN---------------YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNIL 423 (581)
Q Consensus 359 ~~~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nil 423 (581)
.+..++||||+++|+|.+++.... ..+++..++.++.||+.||+||| ++||+||||||+||+
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEE
Confidence 999999999999999999998653 24688999999999999999999 899999999999999
Q ss_pred ecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCcccccccc
Q 008012 424 LDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502 (581)
Q Consensus 424 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~ 502 (581)
++.++.+||+|||++................+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ..
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~--~~ 313 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV--EE 313 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GG
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH--HH
Confidence 99999999999999997754433333334467889999999999999999999999999999999 9999976422 22
Q ss_pred HHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 503 LKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
....+........ +..++..+.++|.+||+.||++|||+.|++++|+++......
T Consensus 314 ~~~~~~~~~~~~~-----------------~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 314 LFKLLKEGHRMDK-----------------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp HHHHHHTTCCCCC-----------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHhcCCCCCC-----------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 2233322221111 113456788999999999999999999999999999876543
No 23
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.6e-46 Score=372.97 Aligned_cols=287 Identities=36% Similarity=0.551 Sum_probs=233.1
Q ss_pred hhccccchhhhHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHH-HHHHHHHHHHHHHhcCCCccceEe
Q 008012 275 LATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQ-AFRSFNSECEVLRNVRHRNLIKIL 353 (581)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~ 353 (581)
......+++.++....++|++.+.||+|+||.||+|..++++.||+|++...... ....+.+|++++++++||||++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~ 93 (326)
T 3uim_A 14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 93 (326)
T ss_dssp -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence 3456778899999999999999999999999999999888999999999765422 223688999999999999999999
Q ss_pred eeeecCCeeeEEEeccCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcE
Q 008012 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHN---YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVA 430 (581)
Q Consensus 354 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~ 430 (581)
+++.+.+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+..||+||||||+||+++.++.+
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~ 173 (326)
T 3uim_A 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 173 (326)
T ss_dssp EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence 99999999999999999999999998643 347899999999999999999994322399999999999999999999
Q ss_pred EEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcc---ccccccHHHHH
Q 008012 431 HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEM---FTGEMNLKNWV 507 (581)
Q Consensus 431 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~---~~~~~~~~~~~ 507 (581)
||+|||++........ .......||+.|+|||++.+..++.++|||||||++|+|++|+.||... .........++
T Consensus 174 kl~Dfg~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 252 (326)
T 3uim_A 174 VVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252 (326)
T ss_dssp EECCCSSCEECCSSSS-CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHH
T ss_pred EeccCccccccCcccc-cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHH
Confidence 9999999987653332 2334456999999999998889999999999999999999999999632 12333455555
Q ss_pred HhhCCCC-CCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHH
Q 008012 508 KESLPHG-LPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKK 567 (581)
Q Consensus 508 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 567 (581)
....... .....+..... ....+.+..+.+++.+||+.||++|||++|++++|+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 253 KGLLKEKKLEALVDVDLQG-----NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTTTSSCCSTTSSCTTCTT-----SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HHHhhchhhhhhcChhhcc-----ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 4443332 33333333222 1234567789999999999999999999999999975
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1e-45 Score=366.17 Aligned_cols=252 Identities=23% Similarity=0.303 Sum_probs=211.0
Q ss_pred hhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
..++|++.+.||+|+||.||+|.. .+++.||+|++........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 457899999999999999999995 4799999999976654445678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCc
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 447 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 447 (581)
|+++++|.+++.... +++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~~~L~~~~~~~~--~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 98 YLAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp CCTTCBHHHHHHHSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred CCCCCCHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 999999999998763 689999999999999999999 89999999999999999999999999999987654332
Q ss_pred ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhhh
Q 008012 448 VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREE 527 (581)
Q Consensus 448 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (581)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .... +........
T Consensus 172 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~-~~~~~~~~~------------ 236 (297)
T 3fxz_A 172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYL-IATNGTPEL------------ 236 (297)
T ss_dssp -CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHH-HHHHCSCCC------------
T ss_pred -ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHhCCCCCC------------
Confidence 2344579999999999999999999999999999999999999997632211 1111 111111110
Q ss_pred hhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 528 NFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 528 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..+..++..+.+++.+||+.||++|||++|++++
T Consensus 237 ---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 237 ---QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp ---SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---CCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1112345668899999999999999999999885
No 25
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.1e-45 Score=370.54 Aligned_cols=271 Identities=22% Similarity=0.312 Sum_probs=214.7
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCC----e
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN----F 361 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~ 361 (581)
+....++|++.+.||+|+||.||+|++. ++.||||++...... .....+|+.++++++||||+++++++.... .
T Consensus 19 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 19 LYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp EEETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred cccchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchH-HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence 3445678999999999999999999986 799999999766433 345566999999999999999999998744 4
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CceecCCCCCCeEecCCCcEE
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST----------PVVHCDLKPSNILLDENMVAH 431 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~----------~i~H~dikp~Nill~~~~~~k 431 (581)
.++||||+++|+|.+++.... +++..++.++.|++.||+||| +. ||+||||||+||+++.++.+|
T Consensus 97 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEEEECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred EEEEEecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 699999999999999998754 789999999999999999999 77 999999999999999999999
Q ss_pred EeeccCceecCCCCCcceeeccccCccccCCCCCCC-----CCCCccccHHHHHHHHHHHHhCCCCCCccccccc-----
Q 008012 432 VSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE-----GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM----- 501 (581)
Q Consensus 432 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~----- 501 (581)
|+|||++................||+.|+|||++.+ ..++.++|||||||++|||+||+.||........
T Consensus 172 L~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~ 251 (322)
T 3soc_A 172 IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEE 251 (322)
T ss_dssp ECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHH
T ss_pred EccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhh
Confidence 999999988765443333444678999999998876 3556789999999999999999999976433211
Q ss_pred ------cHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 502 ------NLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 502 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
....+............... ......++..+.++|.+||+.||++|||+.|+++.|+++.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 252 EIGQHPSLEDMQEVVVHKKKRPVLRD--------YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHCSSCCHHHHHHHHTTSCCCCCCCG--------GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhccCCchhhhhhhhhcccCCCCccc--------cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 11111111111111111111 112234567799999999999999999999999999999764
No 26
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.8e-45 Score=364.87 Aligned_cols=272 Identities=25% Similarity=0.367 Sum_probs=208.4
Q ss_pred chhhhHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeec
Q 008012 281 TSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358 (581)
Q Consensus 281 ~~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 358 (581)
....++....++|++.+.||+|+||.||+|... ++.||+|++.... ....+.+.+|++++++++||||+++++++.+
T Consensus 27 ~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 105 (309)
T 3p86_A 27 MDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ 105 (309)
T ss_dssp -----CBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CCcccccCChhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence 334455566788999999999999999999874 8899999987653 4455778999999999999999999999999
Q ss_pred CCeeeEEEeccCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecCCCcEEEee
Q 008012 359 TNFKALVLEFMPNGSLDKWLYSHNY--FQDIPDRLNIMIDVALALEYLHHGHSTP--VVHCDLKPSNILLDENMVAHVSD 434 (581)
Q Consensus 359 ~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dikp~Nill~~~~~~kl~D 434 (581)
.+..++||||+++++|.+++..... .+++..++.++.|++.||+||| +.| |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~D 182 (309)
T 3p86_A 106 PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCD 182 (309)
T ss_dssp TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECC
T ss_pred CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECC
Confidence 9999999999999999999986542 3788999999999999999999 888 99999999999999999999999
Q ss_pred ccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhh-CCC
Q 008012 435 FGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES-LPH 513 (581)
Q Consensus 435 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~-~~~ 513 (581)
||++....... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+... ...
T Consensus 183 fg~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~~~~~~~ 258 (309)
T 3p86_A 183 FGLSRLKASTF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVGFKCKRL 258 (309)
T ss_dssp CC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHHHSCCCC
T ss_pred CCCCccccccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCCCC
Confidence 99998643221 2234457899999999999999999999999999999999999999764221 111111111 111
Q ss_pred CCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHhhcc
Q 008012 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDAN 577 (581)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~~ 577 (581)
..+ ..+++.+.++|.+||+.||++|||++|+++.|+.+.+....+.+
T Consensus 259 ~~~-----------------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~p~~~ 305 (309)
T 3p86_A 259 EIP-----------------RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPN 305 (309)
T ss_dssp CCC-----------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-------
T ss_pred CCC-----------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCCCCCC
Confidence 111 13445688999999999999999999999999999877655543
No 27
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.4e-46 Score=380.72 Aligned_cols=265 Identities=27% Similarity=0.418 Sum_probs=218.7
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
+....++|++.+.||+|+||.||+|.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 109 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 188 (377)
T 3cbl_A 109 WVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIY 188 (377)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred cEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcE
Confidence 3445678999999999999999999976 78999999987653 344567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||+++|+|.+++...+..+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 189 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 999999999999999877666899999999999999999999 89999999999999999999999999999986533
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
...........++..|+|||++.+..++.++|||||||++|||+| |..||...... .....+........
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~------- 336 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEKGGRLPC------- 336 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHTTCCCCC-------
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCC-------
Confidence 221111122335778999999988899999999999999999998 99999764221 22222222211111
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
+..+++.+.++|.+||+.||++|||++++++.|++++++.
T Consensus 337 ----------~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 337 ----------PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp ----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ----------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 1234567889999999999999999999999999998764
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.2e-45 Score=368.45 Aligned_cols=265 Identities=28% Similarity=0.411 Sum_probs=215.6
Q ss_pred hhcCCCcCCeecccccccEEEEEeC----CCcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS----DGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
..++|++.+.||+|+||.||+|.+. .+..||||+++.. .....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 3567899999999999999999964 3456999999765 3445678999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 999999999999999877667899999999999999999999 89999999999999999999999999999997754
Q ss_pred CCCcc-eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 444 GDDSV-IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 444 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
..... ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+........
T Consensus 204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~~~~~------ 275 (325)
T 3kul_A 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR--DVISSVEEGYRLPA------ 275 (325)
T ss_dssp ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHHHHTTCCCCC------
T ss_pred CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCCCCCC------
Confidence 33222 2233356778999999998899999999999999999999 99999764222 22222222211111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHhh
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLED 575 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 575 (581)
+..++..+.+++.+||..||++|||+.|+++.|+++.+...+.
T Consensus 276 -----------~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~ 318 (325)
T 3kul_A 276 -----------PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESL 318 (325)
T ss_dssp -----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC--
T ss_pred -----------CCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccc
Confidence 1234567889999999999999999999999999998765443
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.8e-45 Score=356.98 Aligned_cols=259 Identities=27% Similarity=0.399 Sum_probs=215.2
Q ss_pred hhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEec
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEF 368 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 368 (581)
..++|++.+.||+|+||.||+|.+.+++.||+|++...... .+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 35678999999999999999999888899999999765322 25688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCcc
Q 008012 369 MPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448 (581)
Q Consensus 369 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 448 (581)
+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....... ..
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 162 (269)
T 4hcu_A 87 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YT 162 (269)
T ss_dssp CTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HH
T ss_pred CCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-cc
Confidence 9999999999887777899999999999999999999 8999999999999999999999999999998653321 11
Q ss_pred eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccccchhhh
Q 008012 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREE 527 (581)
Q Consensus 449 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (581)
......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||...... .....+........+
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~~~~~~~----------- 229 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRLYKP----------- 229 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCCCCC-----------
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcCccCCCC-----------
Confidence 2233456778999999998899999999999999999999 99999763221 222222222111111
Q ss_pred hhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 528 NFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 528 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
..+++.+.+++.+||+.||++|||++|++++|+++.+.
T Consensus 230 ------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 ------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ------CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11245688999999999999999999999999998753
No 30
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5e-46 Score=368.36 Aligned_cols=275 Identities=26% Similarity=0.421 Sum_probs=213.1
Q ss_pred hhcCCCcCCeecccccccEEEEEe-----CCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeec--CCe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL-----SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN--TNF 361 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~ 361 (581)
..++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++.. ...
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 357899999999999999999984 2689999999988777777889999999999999999999999865 356
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceec
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
.++||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred eEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 89999999999999999987766899999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCc-ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccc
Q 008012 442 GEGDDS-VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIAD 520 (581)
Q Consensus 442 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (581)
...... .......++..|+|||.+.+..++.++||||||+++|||+||..||...... ...............
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~------~~~~~~~~~~~~~~~ 238 (295)
T 3ugc_A 165 PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE------FMRMIGNDKQGQMIV 238 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH------HHHHHCTTCCTHHHH
T ss_pred cCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH------HHhhhcCccccchhH
Confidence 543322 1223345777899999999899999999999999999999999998653211 000000000000000
Q ss_pred ccc---hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 521 ANL---LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 521 ~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
... .......+.+..+++.+.+++.+||+.||++|||++|+++.|+++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 239 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 000 0000011112345678999999999999999999999999999998765
No 31
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.1e-45 Score=364.96 Aligned_cols=251 Identities=22% Similarity=0.309 Sum_probs=209.4
Q ss_pred HHhhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 287 ERATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 287 ~~~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
....++|++.+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 90 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLY 90 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEE
Confidence 34467899999999999999999996 48999999999765 3455677889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||+++++|.+++...+. +++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 91 lv~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 91 LIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp EEECCCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EEEECCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999999987654 789999999999999999999 89999999999999999999999999999986643
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCC-ccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVS-SKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
... .....||+.|+|||++.+..+. .++||||+||++|+|++|+.||..... ......+..... .++.
T Consensus 167 ~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~-~~p~----- 235 (328)
T 3fe3_A 167 GGK---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRGKY-RIPF----- 235 (328)
T ss_dssp SCG---GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-CCCT-----
T ss_pred CCc---cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCC-CCCC-----
Confidence 322 3445799999999998887765 799999999999999999999976321 112222211111 1111
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+++.+.+++.+||..||++|||++|+++|
T Consensus 236 ------------~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 236 ------------YMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp ------------TSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred ------------CCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 234567899999999999999999999886
No 32
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-45 Score=368.14 Aligned_cols=255 Identities=26% Similarity=0.349 Sum_probs=202.0
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
.....++|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 5 YDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp STTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 3456788999999999999999999964 89999999987653 333457889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||+++|+|.+++...+. +++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 85 lv~E~~~gg~L~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIISQDR-LSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp EEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred EEEeCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 99999999999999986554 789999999999999999999 89999999999999999999999999999986543
Q ss_pred CCCcceeeccccCccccCCCCCCCCCC-CccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNV-SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
... .......||+.|+|||++.+..+ +.++||||+||++|+|++|..||.... .......+..... ..+.
T Consensus 161 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~--~~~~~~~i~~~~~-~~p~----- 231 (347)
T 3zgw_A 161 NKD-YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--VMALYKKIMRGKY-DVPK----- 231 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCC-CCCT-----
T ss_pred CCC-ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHcCCC-CCCC-----
Confidence 222 22344578999999999988775 899999999999999999999997632 1112222221111 1111
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
.+++.+.+++.+||..||++|||++|++++-
T Consensus 232 ------------~~s~~~~~li~~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 232 ------------WLSPSSILLLQQMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp ------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred ------------CCCHHHHHHHHHHcccCHhHCcCHHHHhcCc
Confidence 1334577999999999999999999999873
No 33
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.1e-44 Score=356.01 Aligned_cols=282 Identities=30% Similarity=0.467 Sum_probs=227.8
Q ss_pred ccccchhhhHHHhhcCCCcC------CeecccccccEEEEEeCCCcEEEEEEeccc----hHHHHHHHHHHHHHHHhcCC
Q 008012 277 TWRRTSYLDLERATDGFNEC------NLLGSGGFGSVYKGILSDGTTVAIKIFNLQ----LEQAFRSFNSECEVLRNVRH 346 (581)
Q Consensus 277 ~~~~~~~~~~~~~~~~y~~~------~~lg~G~~~~v~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~h 346 (581)
....+++.++..++++|... +.||+|+||.||+|.. +++.||+|++... .....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45667888999999888877 8999999999999997 4889999998653 23445678999999999999
Q ss_pred CccceEeeeeecCCeeeEEEeccCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe
Q 008012 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSH--NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL 424 (581)
Q Consensus 347 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill 424 (581)
|||+++++++.+.+..++||||+++++|.+++... ...+++..++.++.|++.||+||| +.||+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEE
Confidence 99999999999999999999999999999999743 345799999999999999999999 8999999999999999
Q ss_pred cCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHH
Q 008012 425 DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLK 504 (581)
Q Consensus 425 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~ 504 (581)
+.++.+||+|||++................|++.|+|||.+.+ .++.++||||||+++|+|++|+.||....... ...
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~ 244 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLL 244 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTT
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHH
Confidence 9999999999999987755443333445578999999998765 58999999999999999999999998643322 222
Q ss_pred HHHHhhC--CCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHH
Q 008012 505 NWVKESL--PHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570 (581)
Q Consensus 505 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 570 (581)
.+..... ...+....+..+. .....++..+.+++.+||+.||++|||+.+++++|+++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 245 DIKEEIEDEEKTIEDYIDKKMN------DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHTTSCCHHHHSCSSCS------CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHHhhhhhhhhhhhcccccc------ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2222111 1111222222111 1223567789999999999999999999999999999864
No 34
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=6.4e-45 Score=370.91 Aligned_cols=270 Identities=26% Similarity=0.394 Sum_probs=221.3
Q ss_pred chhhhHHHhhcCCCcCCeecccccccEEEEEe------CCCcEEEEEEeccch-HHHHHHHHHHHHHHHhc-CCCccceE
Q 008012 281 TSYLDLERATDGFNECNLLGSGGFGSVYKGIL------SDGTTVAIKIFNLQL-EQAFRSFNSECEVLRNV-RHRNLIKI 352 (581)
Q Consensus 281 ~~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~ 352 (581)
+....++...++|++.+.||+|+||.||+|.+ .+++.||||+++... ....+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34456667789999999999999999999983 256889999997653 44557799999999999 79999999
Q ss_pred eeeeecCC-eeeEEEeccCCCCHHHHHhhCCC------------------------------------------------
Q 008012 353 LSSCCNTN-FKALVLEFMPNGSLDKWLYSHNY------------------------------------------------ 383 (581)
Q Consensus 353 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~------------------------------------------------ 383 (581)
++++.+.+ ..++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99988755 48999999999999999986532
Q ss_pred -----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCC
Q 008012 384 -----------------FQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446 (581)
Q Consensus 384 -----------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 446 (581)
.+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 2788999999999999999999 89999999999999999999999999999987755444
Q ss_pred cceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccccchh
Q 008012 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR 525 (581)
Q Consensus 447 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (581)
........+|+.|+|||++.+..++.++|||||||++|||+| |+.||....... .....+........+.
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~-------- 319 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPD-------- 319 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTCCCCCCT--------
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcCCCCCCCC--------
Confidence 444556678999999999988999999999999999999998 999997643222 2223333322222211
Q ss_pred hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 526 EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 526 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
.+++.+.+++.+||+.||++|||++|++++|+++...
T Consensus 320 ---------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 320 ---------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp ---------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 2345688999999999999999999999999998764
No 35
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=8.8e-45 Score=361.07 Aligned_cols=267 Identities=26% Similarity=0.432 Sum_probs=211.7
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
++...++|.+.+.||+|+||.||+|.+. ..+|+|+++.. .....+.+.+|++++++++||||+++++++. .+..+
T Consensus 31 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~ 107 (307)
T 3lb7_A 31 WEIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLA 107 (307)
T ss_dssp CBCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred EEecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEE
Confidence 3455689999999999999999999875 36899988753 3455678999999999999999999999875 45589
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||+++++|.+++......+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 108 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred EEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 999999999999999877777899999999999999999999 88999999999999999999999999999986543
Q ss_pred CCCcceeeccccCccccCCCCCC---CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC-CCCCccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGS---EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLP-HGLPKIA 519 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~ 519 (581)
...........||+.|+|||++. +..++.++|||||||++|||++|+.||......+ .....+..... ..+...
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~- 262 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYASPDLSKL- 262 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHHTCCCCCSTTS-
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH-HHHHHHhcCCCCcchhhh-
Confidence 33333344557999999999875 6678999999999999999999999997643222 22222222211 111111
Q ss_pred cccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 520 DANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
...+++.+.+++.+||+.||++|||+.|++++|+.+...++
T Consensus 263 -------------~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 263 -------------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp -------------CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred -------------hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 11345678899999999999999999999999999876554
No 36
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.6e-45 Score=356.91 Aligned_cols=260 Identities=27% Similarity=0.384 Sum_probs=215.4
Q ss_pred HhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
...++|++.+.||+|+||.||+|..+++..||+|+++..... .+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 5 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred echhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 346789999999999999999999888889999999765422 2568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCc
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 447 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 447 (581)
|+++++|.+++...+..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 159 (268)
T 3sxs_A 84 YISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY- 159 (268)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh-
Confidence 99999999999877666899999999999999999999 89999999999999999999999999999987654322
Q ss_pred ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccccchhh
Q 008012 448 VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526 (581)
Q Consensus 448 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (581)
.......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||...... .....+........+
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~---------- 227 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVVLKVSQGHRLYRP---------- 227 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTCCCCCC----------
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--HHHHHHHcCCCCCCC----------
Confidence 22334456778999999988899999999999999999999 99999763222 111111111111111
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 527 ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 527 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
..+++.+.+++.+||+.||++|||+.|++++|++++++
T Consensus 228 -------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 228 -------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp -------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred -------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11234688999999999999999999999999998654
No 37
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.6e-45 Score=377.71 Aligned_cols=265 Identities=21% Similarity=0.257 Sum_probs=214.9
Q ss_pred chhhhHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHH---HHHHHHHHHHHHHhcCCCccceEeeee
Q 008012 281 TSYLDLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQ---AFRSFNSECEVLRNVRHRNLIKILSSC 356 (581)
Q Consensus 281 ~~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~ 356 (581)
..+.+++...++|++.+.||+|+||.||+|+.+ +++.||+|+++..... ....+.+|..++..++||||+++++++
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345667777899999999999999999999976 6889999999764321 123488899999999999999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeecc
Q 008012 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFG 436 (581)
Q Consensus 357 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg 436 (581)
.+.+..++||||+++|+|.+++.+....+++..++.++.||+.||+||| +.||+||||||+|||++.++.+||+|||
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchh
Confidence 9999999999999999999999986666899999999999999999999 8999999999999999999999999999
Q ss_pred CceecCCCCCcceeeccccCccccCCCCCC-----CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 008012 437 ISKLLGEGDDSVIQTMTIATIGYMAPEFGS-----EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESL 511 (581)
Q Consensus 437 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 511 (581)
+|+....... .......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ......+....
T Consensus 221 la~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~ 298 (437)
T 4aw2_A 221 SCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIMNHKE 298 (437)
T ss_dssp TCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHH
T ss_pred hhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-HHHHhhhhccc
Confidence 9987643322 2234457999999999886 567899999999999999999999999763221 11222221111
Q ss_pred CCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCC--CCCHHHHHHH
Q 008012 512 PHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQ--RLYMKDAATK 564 (581)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~ 564 (581)
...++... ..+++.+.+||.+||..+|++ ||+++|+++|
T Consensus 299 ~~~~p~~~--------------~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 299 RFQFPTQV--------------TDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HCCCCSSC--------------CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cccCCccc--------------ccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 11111110 123456889999999998888 9999999886
No 38
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-45 Score=363.48 Aligned_cols=254 Identities=19% Similarity=0.259 Sum_probs=212.2
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
..++|++.+.||+|+||.||+|... +++.||+|++..... ....+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcc-cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 4578999999999999999999965 789999999876543 34568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--CCcEEEeeccCceecCCCC
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE--NMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~--~~~~kl~Dfg~a~~~~~~~ 445 (581)
|+++++|.+++......+++..++.++.||+.||+||| +.||+||||||+||+++. ++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~ 158 (321)
T 1tki_A 82 FISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD 158 (321)
T ss_dssp CCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred eCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence 99999999999877667899999999999999999999 899999999999999987 7899999999998875432
Q ss_pred CcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchh
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR 525 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (581)
......|++.|+|||++.+..++.++|||||||++|+|++|..||...... .....+...... .+
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~-~~--------- 223 (321)
T 1tki_A 159 ---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIENIMNAEYT-FD--------- 223 (321)
T ss_dssp ---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTCCC-CC---------
T ss_pred ---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHcCCCC-CC---------
Confidence 234457899999999999988999999999999999999999999763221 111111111110 00
Q ss_pred hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 526 EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 526 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
......++.++.+++.+||..||++|||+.|+++|-
T Consensus 224 ----~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 224 ----EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp ----HHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred ----hhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 011224566788999999999999999999999864
No 39
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.5e-44 Score=360.23 Aligned_cols=272 Identities=21% Similarity=0.296 Sum_probs=211.9
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchH--HHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLE--QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
.+...++|++.+.||+|+||.||+|...+++.||+|++..... .....+.+|++++++++||||+++++++.+.+..+
T Consensus 16 ~q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 95 (311)
T 3niz_A 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLT 95 (311)
T ss_dssp EECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEE
T ss_pred ecchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEE
Confidence 3456788999999999999999999988899999999975532 23467889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||+++ +|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 96 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 96 LVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 99999975 899998887777899999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCcceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC---CCccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG---LPKIA 519 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~ 519 (581)
... ......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...... .............. .+...
T Consensus 172 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 172 PVR--SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDD-DQLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp CCC-----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTT-THHHHHHHHHCCCCTTTSGGGT
T ss_pred Ccc--cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHHCCCChHHhhhhh
Confidence 322 2334568999999998776 56899999999999999999999999864332 22222222211111 11111
Q ss_pred cccc--------hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 520 DANL--------LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 520 ~~~~--------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+... ............+++++.++|.+||..||++|||++|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 1000 00001111222345678899999999999999999999975
No 40
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-45 Score=369.38 Aligned_cols=269 Identities=26% Similarity=0.420 Sum_probs=218.4
Q ss_pred hhHHHhhcCCCcCCeecccccccEEEEEeC------CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeee
Q 008012 284 LDLERATDGFNECNLLGSGGFGSVYKGILS------DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSC 356 (581)
Q Consensus 284 ~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 356 (581)
..+....++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 119 (343)
T 1luf_A 40 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC 119 (343)
T ss_dssp HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ceeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345556789999999999999999999964 34889999997653 44567899999999999999999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCce
Q 008012 357 CNTNFKALVLEFMPNGSLDKWLYSHN-----------------------YFQDIPDRLNIMIDVALALEYLHHGHSTPVV 413 (581)
Q Consensus 357 ~~~~~~~lv~e~~~~~~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~ 413 (581)
.+.+..++||||+++++|.+++.... ..+++.+++.++.||++||+||| ++||+
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~iv 196 (343)
T 1luf_A 120 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFV 196 (343)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCC
T ss_pred ccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 99999999999999999999998642 45789999999999999999999 89999
Q ss_pred ecCCCCCCeEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCC
Q 008012 414 HCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKP 492 (581)
Q Consensus 414 H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~P 492 (581)
||||||+||+++.++.+||+|||++................+++.|+|||++.+..++.++||||||+++|||++ |..|
T Consensus 197 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 276 (343)
T 1luf_A 197 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276 (343)
T ss_dssp CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred cCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999987644332233345567899999999988899999999999999999999 9999
Q ss_pred CCccccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 493 TDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 493 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
|...... .....+........+ ..++..+.+++.+||+.||++|||+.+++++|+++.+++
T Consensus 277 ~~~~~~~--~~~~~~~~~~~~~~~-----------------~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 277 YYGMAHE--EVIYYVRDGNILACP-----------------ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TTTSCHH--HHHHHHHTTCCCCCC-----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCCCChH--HHHHHHhCCCcCCCC-----------------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 9763221 122222221111111 134557889999999999999999999999999998776
Q ss_pred Hh
Q 008012 573 LE 574 (581)
Q Consensus 573 ~~ 574 (581)
.+
T Consensus 338 ~~ 339 (343)
T 1luf_A 338 EG 339 (343)
T ss_dssp --
T ss_pred hh
Confidence 54
No 41
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.6e-45 Score=358.04 Aligned_cols=265 Identities=25% Similarity=0.375 Sum_probs=215.8
Q ss_pred hhhHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCee
Q 008012 283 YLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFK 362 (581)
Q Consensus 283 ~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 362 (581)
+..++...++|++.+.||+|+||.||+|.+.++..||+|+++..... .+.+.+|++++++++||||+++++++.+.+..
T Consensus 16 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 94 (283)
T 3gen_A 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI 94 (283)
T ss_dssp CCTTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred CCCccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCe
Confidence 34455667889999999999999999999888889999999765322 25688999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 363 ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
++||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp EEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 9999999999999999876666899999999999999999999 8999999999999999999999999999998654
Q ss_pred CCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
... ........+++.|+|||++.+..++.++||||||+++|+|++ |+.||...... .....+........+.
T Consensus 172 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~~---- 244 (283)
T 3gen_A 172 DDE-YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYRPH---- 244 (283)
T ss_dssp CHH-HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTCCCCCCT----
T ss_pred ccc-cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhcccCCCCCC----
Confidence 321 111223356788999999988899999999999999999998 99999764221 2222222221111111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
.+++.+.+++.+||+.||++|||++|++++|+++.++
T Consensus 245 -------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 245 -------------LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp -------------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -------------cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 1234688999999999999999999999999998764
No 42
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-44 Score=370.12 Aligned_cols=265 Identities=27% Similarity=0.410 Sum_probs=219.7
Q ss_pred HHhhcCCCcCCeecccccccEEEEEeC--------CCcEEEEEEeccch-HHHHHHHHHHHHHHHhc-CCCccceEeeee
Q 008012 287 ERATDGFNECNLLGSGGFGSVYKGILS--------DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNV-RHRNLIKILSSC 356 (581)
Q Consensus 287 ~~~~~~y~~~~~lg~G~~~~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 356 (581)
+...++|.+.+.||+|+||.||+|.+. ++..||+|+++... ....+.+.+|+++++++ +||||+++++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 344578999999999999999999852 23579999997653 44567889999999999 999999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCC
Q 008012 357 CNTNFKALVLEFMPNGSLDKWLYSHN---------------YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSN 421 (581)
Q Consensus 357 ~~~~~~~lv~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~N 421 (581)
.+.+..++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcce
Confidence 99999999999999999999998654 34799999999999999999999 8899999999999
Q ss_pred eEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCcccccc
Q 008012 422 ILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGE 500 (581)
Q Consensus 422 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~ 500 (581)
|+++.++.+||+|||++................+++.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-- 299 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-- 299 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999987755443333444567889999999999999999999999999999999 9999976321
Q ss_pred ccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 501 MNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
......+........+ ..++..+.+++.+||+.||++|||++|++++|+++.....
T Consensus 300 ~~~~~~~~~~~~~~~~-----------------~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 300 EELFKLLKEGHRMDKP-----------------SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355 (382)
T ss_dssp HHHHHHHHTTCCCCCC-----------------SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHcCCCCCCC-----------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 2222223222211111 1234568899999999999999999999999999987654
No 43
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.1e-44 Score=362.06 Aligned_cols=265 Identities=28% Similarity=0.417 Sum_probs=219.6
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEe------CCCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeee
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGIL------SDGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCC 357 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 357 (581)
.++...++|.+.+.||+|+||.||+|.. .+++.||+|+++... ....+.+.+|++++++++||||+++++++.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 96 (314)
T 2ivs_A 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS 96 (314)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred ccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe
Confidence 3344567899999999999999999985 245889999997653 455678899999999999999999999999
Q ss_pred cCCeeeEEEeccCCCCHHHHHhhCCC-----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcee
Q 008012 358 NTNFKALVLEFMPNGSLDKWLYSHNY-----------------------FQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414 (581)
Q Consensus 358 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----------------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H 414 (581)
+.+..++||||+++++|.+++..... .+++..++.++.||+.||+||| +.||+|
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH 173 (314)
T 2ivs_A 97 QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVH 173 (314)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEEC
T ss_pred cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcc
Confidence 99999999999999999999986532 3688999999999999999999 899999
Q ss_pred cCCCCCCeEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCC
Q 008012 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPT 493 (581)
Q Consensus 415 ~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf 493 (581)
|||||+||+++.++.+||+|||++................+++.|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus 174 ~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 253 (314)
T 2ivs_A 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPY 253 (314)
T ss_dssp CCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred cccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999987755443333344567889999999988899999999999999999999 99999
Q ss_pred CccccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 494 DEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
..... ......+........+ ..+++.+.+++.+||+.||++|||+.|++++|+++..+
T Consensus 254 ~~~~~--~~~~~~~~~~~~~~~~-----------------~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 254 PGIPP--ERLFNLLKTGHRMERP-----------------DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp TTCCG--GGHHHHHHTTCCCCCC-----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCH--HHHHHHhhcCCcCCCC-----------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 76432 2233333322211111 13445688999999999999999999999999998754
No 44
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.4e-44 Score=369.28 Aligned_cols=262 Identities=28% Similarity=0.456 Sum_probs=205.2
Q ss_pred hhcCCCcCCeecccccccEEEEEeC----CCcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS----DGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
..++|++.+.||+|+||.||+|+.. ++..||||+++.. .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 3468999999999999999999864 5778999999765 3445678999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||+++++|.+++...+..+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 123 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 999999999999999987777899999999999999999999 89999999999999999999999999999987653
Q ss_pred CCCcc-eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 444 GDDSV-IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 444 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
..... ......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.......
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~~i~~~~~~~------- 270 (373)
T 2qol_A 200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYRLP------- 270 (373)
T ss_dssp --------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHHHHHTTEECC-------
T ss_pred CCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCC-------
Confidence 32211 1122245678999999998999999999999999999998 99999764221 1222222211100
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
.+..++..+.+++.+||+.||++||++.|+++.|+++....
T Consensus 271 ----------~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 271 ----------PPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp ----------CCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred ----------CCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 11234567889999999999999999999999999997654
No 45
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.2e-45 Score=371.32 Aligned_cols=263 Identities=23% Similarity=0.343 Sum_probs=214.7
Q ss_pred hcCCCcCCeecccccccEEEEEeC------CCcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS------DGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFK 362 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 362 (581)
.++|++.+.||+|+||.||+|.+. +++.||||+++.. .......+.+|+.++++++||||+++++++.+.+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467899999999999999999943 4678999999654 344456788999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---cEEEe
Q 008012 363 ALVLEFMPNGSLDKWLYSHN------YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM---VAHVS 433 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~---~~kl~ 433 (581)
++||||+++|+|.+++.... ..+++..++.++.||+.||+||| ++||+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999998643 34789999999999999999999 89999999999999999554 59999
Q ss_pred eccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCC
Q 008012 434 DFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLP 512 (581)
Q Consensus 434 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~ 512 (581)
|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ......+.....
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~~~i~~~~~ 304 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSGGR 304 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHTTCC
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC
Confidence 9999986533332233345567899999999988899999999999999999998 9999976322 222222222211
Q ss_pred CCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 513 HGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
... +..++..+.+++.+||+.||++|||+.|++++|+.+......
T Consensus 305 ~~~-----------------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~ 349 (367)
T 3l9p_A 305 MDP-----------------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349 (367)
T ss_dssp CCC-----------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred CCC-----------------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhh
Confidence 111 113445688999999999999999999999999998876543
No 46
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=7.5e-45 Score=364.14 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=208.2
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 478999999999999999999966 89999999986553 2334678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCc
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 447 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 447 (581)
|+++++|.+++..... +++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++..+......
T Consensus 86 ~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDIG-MPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTTB-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999999876544 789999999999999999999 899999999999999999999999999999876443333
Q ss_pred ceeeccccCccccCCCCCCCCCC-CccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhh
Q 008012 448 VIQTMTIATIGYMAPEFGSEGNV-SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526 (581)
Q Consensus 448 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (581)
.......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||............+.......
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~------------- 228 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL------------- 228 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTS-------------
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccC-------------
Confidence 33345679999999999877765 7789999999999999999999976543333333322211110
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 527 ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 527 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.....++..+.+++.+||..||++|||++|++++
T Consensus 229 ----~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 ----NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1112345567899999999999999999999876
No 47
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-44 Score=365.13 Aligned_cols=270 Identities=24% Similarity=0.363 Sum_probs=217.5
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEe------CCCcEEEEEEeccch-HHHHHHHHHHHHHHHhc-CCCccceEeeee
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGIL------SDGTTVAIKIFNLQL-EQAFRSFNSECEVLRNV-RHRNLIKILSSC 356 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 356 (581)
+++...++|++.+.||+|+||.||+|.. .++..||+|++.... ....+.+.+|+.+++++ +||||+++++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3455678899999999999999999995 246689999997653 33456789999999999 899999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHHhhCCC----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcee
Q 008012 357 CNTNFKALVLEFMPNGSLDKWLYSHNY----------------------FQDIPDRLNIMIDVALALEYLHHGHSTPVVH 414 (581)
Q Consensus 357 ~~~~~~~lv~e~~~~~~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H 414 (581)
...+..++||||+++|+|.+++..... .+++..++.++.||+.||+||| +.||+|
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH 195 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVH 195 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccc
Confidence 999999999999999999999986543 2688999999999999999999 899999
Q ss_pred cCCCCCCeEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCC
Q 008012 415 CDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPT 493 (581)
Q Consensus 415 ~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf 493 (581)
|||||+||+++.++.+||+|||++................+++.|+|||++.+..++.++||||||+++|+|+| |..||
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 275 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCc
Confidence 99999999999999999999999987755444444455667889999999988899999999999999999998 99999
Q ss_pred CccccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 494 DEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
...... ......+........+ ..+++.+.+++.+||+.||++|||+.|++++|+.+.+...
T Consensus 276 ~~~~~~-~~~~~~~~~~~~~~~~-----------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 276 PGIPVD-ANFYKLIQNGFKMDQP-----------------FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp TTCCCS-HHHHHHHHTTCCCCCC-----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred ccCCcH-HHHHHHHhcCCCCCCC-----------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 764322 2233333332221111 1234568899999999999999999999999999988766
Q ss_pred hh
Q 008012 574 ED 575 (581)
Q Consensus 574 ~~ 575 (581)
+.
T Consensus 338 ~~ 339 (344)
T 1rjb_A 338 EA 339 (344)
T ss_dssp --
T ss_pred HH
Confidence 54
No 48
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.2e-44 Score=353.94 Aligned_cols=264 Identities=23% Similarity=0.364 Sum_probs=206.0
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeC----CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCC
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILS----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN 360 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 360 (581)
.+...++|++.+.||+|+||.||+|.+. .+..||+|+++... ....+.+.+|+.++++++||||+++++++. .+
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~ 88 (281)
T 1mp8_A 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN 88 (281)
T ss_dssp CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SS
T ss_pred eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cC
Confidence 4455678999999999999999999964 24579999987643 445678999999999999999999999984 56
Q ss_pred eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..++||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++..
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 89 PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccc
Confidence 789999999999999999987767899999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccc
Q 008012 441 LGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIA 519 (581)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (581)
...... .......+++.|+|||++.+..++.++||||||+++|||++ |..||...... .....+........+
T Consensus 166 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i~~~~~~~~~--- 239 (281)
T 1mp8_A 166 MEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGERLPMP--- 239 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCCCCCC---
T ss_pred cCcccc-cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHHHcCCCCCCC---
Confidence 643321 12233456788999999988899999999999999999997 99999764322 222222222111111
Q ss_pred cccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 520 DANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
..+++.+.+++.+||+.||++|||+.|++++|+++.++..
T Consensus 240 --------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 240 --------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp --------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1345678899999999999999999999999999987643
No 49
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.4e-44 Score=359.06 Aligned_cols=249 Identities=24% Similarity=0.271 Sum_probs=207.4
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
.++|++.+.||+|+||.||+|+.+ +|+.||+|+++... ......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467999999999999999999965 79999999997653 22345788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||++||+|.+++...+ .+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999998654 3789999999999999999999 8999999999999999999999999999998643222
Q ss_pred CcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchh
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR 525 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (581)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... ..++
T Consensus 160 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~-~~~p--------- 225 (337)
T 1o6l_A 160 A--TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILMEE-IRFP--------- 225 (337)
T ss_dssp C--CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-CCCC---------
T ss_pred C--cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHHHHHcCC-CCCC---------
Confidence 1 23445789999999999999999999999999999999999999976321 11222221111 1111
Q ss_pred hhhhhhHHHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 008012 526 EENFFSARMDCLLSIFHLALDCCAELPDQRL-----YMKDAATK 564 (581)
Q Consensus 526 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 564 (581)
..+++++.++|.+||+.||++|| +++|+++|
T Consensus 226 --------~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 226 --------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --------CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 12345688999999999999999 89999887
No 50
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.3e-44 Score=358.46 Aligned_cols=266 Identities=24% Similarity=0.359 Sum_probs=221.2
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEe------CCCcEEEEEEeccch-HHHHHHHHHHHHHHHhc-CCCccceEeeeee
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGIL------SDGTTVAIKIFNLQL-EQAFRSFNSECEVLRNV-RHRNLIKILSSCC 357 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~ 357 (581)
++...++|++.+.||+|+||.||+|.+ .+++.||+|+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 344567899999999999999999984 257889999997653 34557899999999999 9999999999999
Q ss_pred cCCeeeEEEeccCCCCHHHHHhhCCC-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCC
Q 008012 358 NTNFKALVLEFMPNGSLDKWLYSHNY-----------------FQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPS 420 (581)
Q Consensus 358 ~~~~~~lv~e~~~~~~L~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~ 420 (581)
+.+..++||||+++|+|.+++..... .+++..++.++.|++.||+||| +.||+||||||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~ 174 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAAR 174 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccc
Confidence 99999999999999999999986543 3789999999999999999999 899999999999
Q ss_pred CeEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccc
Q 008012 421 NILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTG 499 (581)
Q Consensus 421 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~ 499 (581)
||+++.++.+||+|||++................+++.|+|||++.+..++.++||||||+++|+|+| |+.||......
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 254 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence 99999999999999999988765544444445567889999999988899999999999999999999 99999764322
Q ss_pred cccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 500 EMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
......+........+ ..++..+.+++.+||+.||++|||+.|++++|+++..+.
T Consensus 255 -~~~~~~~~~~~~~~~~-----------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 255 -SKFYKMIKEGFRMLSP-----------------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp -HHHHHHHHHTCCCCCC-----------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -hHHHHHhccCCCCCCc-----------------ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 2233333332221111 123456889999999999999999999999999987654
No 51
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.6e-44 Score=359.04 Aligned_cols=260 Identities=21% Similarity=0.276 Sum_probs=213.1
Q ss_pred chhhhHHHhhcC----------CCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCcc
Q 008012 281 TSYLDLERATDG----------FNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNL 349 (581)
Q Consensus 281 ~~~~~~~~~~~~----------y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i 349 (581)
+++.+++.+.+. |+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni 104 (321)
T 2c30_A 25 VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104 (321)
T ss_dssp CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTB
T ss_pred CcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCc
Confidence 455555555433 667789999999999999976 799999999976655555678899999999999999
Q ss_pred ceEeeeeecCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 008012 350 IKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV 429 (581)
Q Consensus 350 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~ 429 (581)
+++++++...+..++||||+++++|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.
T Consensus 105 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~ 179 (321)
T 2c30_A 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGR 179 (321)
T ss_dssp CCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCC
T ss_pred ceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCc
Confidence 99999999999999999999999999998754 4799999999999999999999 899999999999999999999
Q ss_pred EEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 008012 430 AHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE 509 (581)
Q Consensus 430 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~ 509 (581)
+||+|||++........ ......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+..
T Consensus 180 ~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~~~ 255 (321)
T 2c30_A 180 VKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLRD 255 (321)
T ss_dssp EEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHH
T ss_pred EEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhc
Confidence 99999999987654322 22445799999999999999999999999999999999999999976321 112222222
Q ss_pred hCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 510 SLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
....... ....+++.+.+++.+||..||++|||++|++++
T Consensus 256 ~~~~~~~---------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 256 SPPPKLK---------------NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp SSCCCCT---------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCCCcC---------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2111110 112344568899999999999999999999986
No 52
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3e-44 Score=364.20 Aligned_cols=253 Identities=20% Similarity=0.251 Sum_probs=208.8
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHH------HHHHHHHHHHHHHhcCCCccceEeeeeecCCe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQ------AFRSFNSECEVLRNVRHRNLIKILSSCCNTNF 361 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 361 (581)
..+.|++.+.||+|+||.||+|..+ +|+.||+|+++..... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 4578999999999999999999966 7999999999765321 24578899999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----cEEEeeccC
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM----VAHVSDFGI 437 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~----~~kl~Dfg~ 437 (581)
.++||||++||+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||+++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 999999999999999997654 4799999999999999999999 89999999999999998776 799999999
Q ss_pred ceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCc
Q 008012 438 SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPK 517 (581)
Q Consensus 438 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 517 (581)
+........ .....||+.|+|||++.+..++.++|||||||++|+|++|.+||...... .....+..... .++
T Consensus 166 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--~~~~~i~~~~~-~~~- 238 (361)
T 2yab_A 166 AHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANITAVSY-DFD- 238 (361)
T ss_dssp CEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHTTCC-CCC-
T ss_pred ceEcCCCCc---cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCC-CCC-
Confidence 987754322 23457999999999999999999999999999999999999999763211 11111111110 000
Q ss_pred cccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 518 IADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
......++..+.++|.+||..||++|||+.|+++|
T Consensus 239 ------------~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 239 ------------EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp ------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ------------chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01122345678899999999999999999999975
No 53
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.3e-43 Score=352.06 Aligned_cols=267 Identities=25% Similarity=0.369 Sum_probs=209.9
Q ss_pred HhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHh--cCCCccceEeeeeec----CCe
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRN--VRHRNLIKILSSCCN----TNF 361 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~iv~~~~~~~~----~~~ 361 (581)
...++|++.+.||+|+||.||+|.. +++.||||++..... ..+.+|.+++.. ++||||+++++++.. ...
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~ 80 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQ 80 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGH---HHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccc---hhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCce
Confidence 3467899999999999999999998 589999999976543 345567777776 799999999998654 346
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCceecCCCCCCeEecCCCcEEEeecc
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG-----HSTPVVHCDLKPSNILLDENMVAHVSDFG 436 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~i~H~dikp~Nill~~~~~~kl~Dfg 436 (581)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||.. ++.+|+||||||+||+++.++.+||+|||
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg 158 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLG 158 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred eEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCC
Confidence 89999999999999999654 478999999999999999999932 25789999999999999999999999999
Q ss_pred CceecCCCCCcc--eeeccccCccccCCCCCCCC------CCCccccHHHHHHHHHHHHhC----------CCCCCcccc
Q 008012 437 ISKLLGEGDDSV--IQTMTIATIGYMAPEFGSEG------NVSSKCDVYSYGILLLETFTR----------KKPTDEMFT 498 (581)
Q Consensus 437 ~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~vl~el~tg----------~~Pf~~~~~ 498 (581)
++.......... ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||.....
T Consensus 159 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~ 238 (301)
T 3q4u_A 159 LAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVP 238 (301)
T ss_dssp TCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCC
Confidence 998765433221 12234789999999988776 455799999999999999999 888877655
Q ss_pred ccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHh
Q 008012 499 GEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568 (581)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 568 (581)
....................... ......++..+.+++.+||+.||++|||++|+++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 239 NDPSFEDMRKVVCVDQQRPNIPN--------RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCG--------GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcchhhhhHHHhccCCCCCCCh--------hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 54444444333222211111111 111235677899999999999999999999999999986
No 54
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.8e-44 Score=356.81 Aligned_cols=264 Identities=22% Similarity=0.373 Sum_probs=211.1
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc---hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 4578999999999999999999965 7899999998543 34556789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
||||+++++|.+++...+ .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 89 v~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 999999999999998765 3789999999999999999999 899999999999999999999999999999866432
Q ss_pred CCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
.. .......||+.|+|||.+.+..++.++||||||+++|+|++|+.||....... ..........+...
T Consensus 165 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~~~~~~~~~~~~~----- 233 (294)
T 4eqm_A 165 SL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS-----IAIKHIQDSVPNVT----- 233 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH-----HHHHHHSSCCCCHH-----
T ss_pred cc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHhhccCCCcc-----
Confidence 21 22334568999999999999999999999999999999999999997642211 11111111111110
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCC-CHHHHHHHHHHhHHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRL-YMKDAATKLKKIRDKF 572 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~~~~~~ 572 (581)
.....++++.+.+++.+||+.||++|| +++++.+.|+++..+.
T Consensus 234 -----~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 234 -----TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp -----HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred -----hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 011123566788999999999999999 8999999998876443
No 55
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=9.7e-44 Score=369.83 Aligned_cols=255 Identities=20% Similarity=0.285 Sum_probs=208.7
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
...++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 45678999999999999999999965 79999999987543 3455678999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec---CCCcEEEeeccCceec
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLL 441 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~---~~~~~kl~Dfg~a~~~ 441 (581)
||||+++|+|.+++...+. +++..+..++.||+.||+||| +.||+||||||+||+++ .++.+||+|||++...
T Consensus 88 v~E~~~gg~L~~~i~~~~~-~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAREY-YSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp EECCCBCCBHHHHHHHCSC-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 9999999999999987654 799999999999999999999 89999999999999998 4678999999999876
Q ss_pred CCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 442 GEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 442 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
..... ......||+.|+|||++.+..++.++||||+||++|+|++|.+||.... .......+....... +.
T Consensus 164 ~~~~~--~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--~~~~~~~i~~~~~~~-~~---- 234 (444)
T 3soa_A 164 EGEQQ--AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--QHRLYQQIKAGAYDF-PS---- 234 (444)
T ss_dssp CTTCC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHTCCCC-CT----
T ss_pred cCCCc--eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHhCCCCC-Cc----
Confidence 43322 2234579999999999999999999999999999999999999997632 122222222211111 00
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+....+++.+.++|.+||+.||++|||+.|+++|
T Consensus 235 ---------~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 235 ---------PEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp ---------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ---------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0111345678899999999999999999999986
No 56
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-44 Score=364.86 Aligned_cols=254 Identities=22% Similarity=0.302 Sum_probs=211.6
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
..++|++.+.||+|+||.||+|... +++.||+|++..........+.+|++++++++||||+++++++.+.+..++|||
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 3568999999999999999999965 789999999987765556688999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC--CCcEEEeeccCceecCCCC
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE--NMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~--~~~~kl~Dfg~a~~~~~~~ 445 (581)
|+++|+|.+++......+++..++.++.||+.||+||| +.||+||||||+||+++. ++.+||+|||++.......
T Consensus 129 ~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 129 FLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred cCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 99999999999877666899999999999999999999 899999999999999974 5789999999999775432
Q ss_pred CcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchh
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR 525 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (581)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...... .+.
T Consensus 206 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~~~~~-~~~-------- 271 (387)
T 1kob_A 206 I---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKRCDWE-FDE-------- 271 (387)
T ss_dssp C---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHHCCCC-CCS--------
T ss_pred c---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCCC-CCc--------
Confidence 2 2345799999999999999999999999999999999999999976321 1111112111110 000
Q ss_pred hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 526 EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 526 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.....+++.+.++|.+||..||++|||+.|++++
T Consensus 272 -----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 272 -----DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -----STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 0011345568899999999999999999999986
No 57
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.2e-44 Score=355.40 Aligned_cols=264 Identities=27% Similarity=0.424 Sum_probs=202.9
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCee
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFK 362 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 362 (581)
..+...++|++.+.||+|+||.||+|... ..||+|+++.. .....+.+.+|++++++++||||+++++++ ..+..
T Consensus 18 ~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~ 94 (289)
T 3og7_A 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQL 94 (289)
T ss_dssp CCBCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSC
T ss_pred CCccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCcc
Confidence 34556788999999999999999999865 35999998654 345567899999999999999999999965 45668
Q ss_pred eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 363 ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
++||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 95 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccc
Confidence 9999999999999999877777899999999999999999999 8999999999999999999999999999998664
Q ss_pred CCCCcceeeccccCccccCCCCCC---CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC-CCCCcc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGS---EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLP-HGLPKI 518 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~ 518 (581)
............|++.|+|||++. +..++.++||||||+++|+|++|+.||....... .....+..... ......
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 250 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGRGSLSPDLSKV 250 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHHHHTSCCCCTTSS
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHhcccccCcchhhc
Confidence 433333334557899999999876 6678899999999999999999999997643322 22222222211 111111
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhH
Q 008012 519 ADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIR 569 (581)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 569 (581)
...+++.+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 251 --------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 251 --------------RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp --------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred --------------cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 1134567889999999999999999999999999875
No 58
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.3e-44 Score=359.65 Aligned_cols=259 Identities=25% Similarity=0.426 Sum_probs=206.7
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcE----EEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTT----VAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
.++|++.+.||+|+||.||+|.+. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 467899999999999999999954 4444 5888775443 334567899999999999999999999998765 78
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+|+||+++|+|.+++......+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999999987777899999999999999999999 88999999999999999999999999999988765
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
...........+|..|+|||++.+..++.++|||||||++|||+| |+.||..... ......+........+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~~~~~~------ 241 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP------ 241 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCCCCC------
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHHHcCCCCCCC------
Confidence 544444445567889999999999999999999999999999999 9999976422 2333333332211111
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
..++..+.+++.+||+.||++|||+.|++++|+++...
T Consensus 242 -----------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 242 -----------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----------TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred -----------ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 12345688999999999999999999999999988654
No 59
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.6e-44 Score=360.89 Aligned_cols=267 Identities=23% Similarity=0.409 Sum_probs=199.8
Q ss_pred hhHHHhhcCCCcCCeecccccccEEEEEeC-CCc---EEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeee
Q 008012 284 LDLERATDGFNECNLLGSGGFGSVYKGILS-DGT---TVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCC 357 (581)
Q Consensus 284 ~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~---~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 357 (581)
.++....++|++.+.||+|+||.||+|.+. +++ .||+|+++.. .....+.+.+|++++++++||||+++++++.
T Consensus 16 ~~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 95 (323)
T 3qup_A 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSL 95 (323)
T ss_dssp CTTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEE
T ss_pred hhcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceee
Confidence 344556788999999999999999999965 332 7999999765 3345678999999999999999999999998
Q ss_pred cCCee------eEEEeccCCCCHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC
Q 008012 358 NTNFK------ALVLEFMPNGSLDKWLYSH-----NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE 426 (581)
Q Consensus 358 ~~~~~------~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~ 426 (581)
..+.. ++||||+++++|.+++... ...+++..++.++.|++.||+||| +.||+||||||+||+++.
T Consensus 96 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~ 172 (323)
T 3qup_A 96 RSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAE 172 (323)
T ss_dssp CC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECT
T ss_pred ccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcC
Confidence 76654 9999999999999999743 224789999999999999999999 899999999999999999
Q ss_pred CCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHH
Q 008012 427 NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKN 505 (581)
Q Consensus 427 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~ 505 (581)
++.+||+|||++................+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 173 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~ 250 (323)
T 3qup_A 173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYN 250 (323)
T ss_dssp TSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH
T ss_pred CCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHH
Confidence 99999999999987654443333444567889999999999899999999999999999999 99999764322 2222
Q ss_pred HHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 506 WVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
.+........ +..++..+.+++.+||+.||++|||+.++++.|+++....
T Consensus 251 ~~~~~~~~~~-----------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 251 YLIGGNRLKQ-----------------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHTTCCCCC-----------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHhcCCCCCC-----------------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 2222111111 1123456889999999999999999999999999987643
No 60
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=8.2e-44 Score=360.89 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=206.5
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHH-----HHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQ-----AFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
.++|++.+.||+|+||.||+|..+ +++.||+|++...... ..+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 467999999999999999999965 7999999998654311 2467889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---EEEeeccC
Q 008012 364 LVLEFMPNGSLDKWLYSH---NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV---AHVSDFGI 437 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~---~kl~Dfg~ 437 (581)
+||||+++++|.+++... +..+++..++.++.||+.||+||| ++||+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999888643 345789999999999999999999 899999999999999986554 99999999
Q ss_pred ceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCc
Q 008012 438 SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPK 517 (581)
Q Consensus 438 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 517 (581)
+........ ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ............. ..
T Consensus 180 a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i~~~~~~--~~- 252 (351)
T 3c0i_A 180 AIQLGESGL--VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYK--MN- 252 (351)
T ss_dssp CEECCTTSC--BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHHHHTCCC--CC-
T ss_pred eeEecCCCe--eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHHHcCCCC--CC-
Confidence 987754322 2334579999999999999999999999999999999999999997631 1111111111110 00
Q ss_pred cccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 518 IADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
......++..+.++|.+||..||++|||+.|+++|
T Consensus 253 ------------~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 253 ------------PRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp ------------HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------------ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01112345678899999999999999999999975
No 61
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=6.9e-44 Score=352.41 Aligned_cols=268 Identities=21% Similarity=0.259 Sum_probs=207.6
Q ss_pred cCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
++|++.+.||+|+||+||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57999999999999999999965 78999999997543 3344678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCc
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 447 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 447 (581)
|+++ ++.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 9976 777777766666899999999999999999999 88999999999999999999999999999987643322
Q ss_pred ceeeccccCccccCCCCCCCCC-CCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC---CCccccc--
Q 008012 448 VIQTMTIATIGYMAPEFGSEGN-VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG---LPKIADA-- 521 (581)
Q Consensus 448 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-- 521 (581)
......+|+.|+|||++.+.. ++.++|||||||++|+|++|..||.........+........... .+.....
T Consensus 157 -~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 157 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp -CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred -cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 234457899999999887765 899999999999999999998886543333223333322221111 1000000
Q ss_pred -----cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 522 -----NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 522 -----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..............++..+.+++.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000000011112355678899999999999999999999875
No 62
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1e-43 Score=361.33 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=209.3
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
...++|++.+.||+|+||.||+|..+ +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34578999999999999999999965 7899999999754 24455778999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CcEEEeeccCceec
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDEN---MVAHVSDFGISKLL 441 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~---~~~kl~Dfg~a~~~ 441 (581)
||||+++|+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.+ +.+||+|||++...
T Consensus 106 v~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp EECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 999999999999997654 4789999999999999999999 8999999999999999864 45999999999876
Q ss_pred CCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 442 GEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 442 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
..... .....||+.|+|||++.+..++.++|||||||++|+|++|++||..... ......+...... .+.
T Consensus 182 ~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~~~~~~-~~~---- 251 (362)
T 2bdw_A 182 NDSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKAGAYD-YPS---- 251 (362)
T ss_dssp TTCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCC-CCT----
T ss_pred cCCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHhCCCC-CCc----
Confidence 53322 2345799999999999999999999999999999999999999976321 1222222221111 000
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.....+++.+.++|.+||..||++|||+.|+++|
T Consensus 252 ---------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 252 ---------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ---------TGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ---------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1112345678899999999999999999999887
No 63
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.1e-43 Score=358.04 Aligned_cols=266 Identities=26% Similarity=0.429 Sum_probs=218.1
Q ss_pred HHhhcCCCcCCeecccccccEEEEEeC--------CCcEEEEEEeccch-HHHHHHHHHHHHHHHhc-CCCccceEeeee
Q 008012 287 ERATDGFNECNLLGSGGFGSVYKGILS--------DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNV-RHRNLIKILSSC 356 (581)
Q Consensus 287 ~~~~~~y~~~~~lg~G~~~~v~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 356 (581)
....++|++.+.||+|+||.||+|.+. +++.||+|+++... ....+.+.+|+++++++ +||||+++++++
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 31 EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 345688999999999999999999863 46789999997653 44567889999999999 899999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHHhhCCC---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCC
Q 008012 357 CNTNFKALVLEFMPNGSLDKWLYSHNY---------------FQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSN 421 (581)
Q Consensus 357 ~~~~~~~lv~e~~~~~~L~~~l~~~~~---------------~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~N 421 (581)
.+.+..++||||+++++|.+++..... .+++..++.++.||+.||+||| +.||+||||||+|
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N 187 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARN 187 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGG
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccce
Confidence 999999999999999999999986532 3788999999999999999999 8999999999999
Q ss_pred eEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCcccccc
Q 008012 422 ILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGE 500 (581)
Q Consensus 422 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~ 500 (581)
|+++.++.+||+|||++................+++.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-- 265 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-- 265 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH--
T ss_pred EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH--
Confidence 9999999999999999987754433333344457889999999988889999999999999999999 9999976321
Q ss_pred ccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 501 MNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
......+........+ ..++..+.+++.+||+.||++|||+.|++++|+++......
T Consensus 266 ~~~~~~~~~~~~~~~~-----------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 266 EELFKLLKEGHRMDKP-----------------ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp HHHHHHHHHTCCCCCC-----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhcCCCCCCC-----------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 1222222222211111 13445688999999999999999999999999999876543
No 64
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.5e-44 Score=359.10 Aligned_cols=269 Identities=23% Similarity=0.375 Sum_probs=221.5
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEeC-CC-----cEEEEEEeccch-HHHHHHHHHHHHHHHhc-CCCccceEeeee
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGILS-DG-----TTVAIKIFNLQL-EQAFRSFNSECEVLRNV-RHRNLIKILSSC 356 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 356 (581)
.++...++|++.+.||+|+||.||+|... ++ ..||+|++.... ....+.+.+|+++++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 45566789999999999999999999964 23 479999997653 34557789999999999 899999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHHhhC-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeE
Q 008012 357 CNTNFKALVLEFMPNGSLDKWLYSH-------------NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNIL 423 (581)
Q Consensus 357 ~~~~~~~lv~e~~~~~~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nil 423 (581)
.+.+..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +.||+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEE
Confidence 9999999999999999999999853 234688999999999999999999 889999999999999
Q ss_pred ecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCcccccccc
Q 008012 424 LDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMN 502 (581)
Q Consensus 424 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~ 502 (581)
++.++.+||+|||++................+++.|+|||++.+..++.++||||||+++|||+| |..||...... ..
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~ 275 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SK 275 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-HH
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-HH
Confidence 99999999999999987654444334445567889999999988899999999999999999999 99999764322 22
Q ss_pred HHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 503 LKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
....+........+. .++..+.+++.+||+.||++|||+.|++++|+++..+...
T Consensus 276 ~~~~~~~~~~~~~~~-----------------~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 330 (333)
T 2i1m_A 276 FYKLVKDGYQMAQPA-----------------FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRR 330 (333)
T ss_dssp HHHHHHHTCCCCCCT-----------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCCCCC-----------------CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhhc
Confidence 333333332221111 2245688999999999999999999999999998876554
No 65
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-43 Score=352.04 Aligned_cols=273 Identities=25% Similarity=0.376 Sum_probs=212.8
Q ss_pred hhhhHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhc--CCCccceEeeeeecC
Q 008012 282 SYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV--RHRNLIKILSSCCNT 359 (581)
Q Consensus 282 ~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~~iv~~~~~~~~~ 359 (581)
+........++|++.+.||+|+||.||+|+.. ++.||+|++..... ....+|.+++... +||||+++++++...
T Consensus 28 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 28 PLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp CHHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred CcccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 33444566789999999999999999999986 89999999876543 2344566666555 899999999999876
Q ss_pred ----CeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC--------CceecCCCCCCeEecCC
Q 008012 360 ----NFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST--------PVVHCDLKPSNILLDEN 427 (581)
Q Consensus 360 ----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~--------~i~H~dikp~Nill~~~ 427 (581)
...++||||+++|+|.+++.... +++..++.++.|++.||+||| +. ||+||||||+||+++.+
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~ 178 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKN 178 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred CCCCCceEEEEeccCCCcHHHHhhccC--CCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCC
Confidence 68899999999999999997653 789999999999999999999 66 99999999999999999
Q ss_pred CcEEEeeccCceecCCCCCcc--eeeccccCccccCCCCCCCCCCCcc------ccHHHHHHHHHHHHhC----------
Q 008012 428 MVAHVSDFGISKLLGEGDDSV--IQTMTIATIGYMAPEFGSEGNVSSK------CDVYSYGILLLETFTR---------- 489 (581)
Q Consensus 428 ~~~kl~Dfg~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~------~Dv~slG~vl~el~tg---------- 489 (581)
+.+||+|||++.......... ......||+.|+|||++.+...+.+ +|||||||++|||+||
T Consensus 179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~ 258 (337)
T 3mdy_A 179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY 258 (337)
T ss_dssp SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence 999999999998764332221 1224578999999999887766665 9999999999999999
Q ss_pred CCCCCccccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhH
Q 008012 490 KKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIR 569 (581)
Q Consensus 490 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 569 (581)
+.||............................ .....++++.+.+++.+||+.||++|||+.|++++|+++.
T Consensus 259 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 330 (337)
T 3mdy_A 259 QLPYHDLVPSDPSYEDMREIVCIKKLRPSFPN--------RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330 (337)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG--------GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccHhhhcCCCCchhhhHHHHhhhccCccccc--------cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence 67776654444444333332222221111111 1122367888999999999999999999999999999987
Q ss_pred HH
Q 008012 570 DK 571 (581)
Q Consensus 570 ~~ 571 (581)
+.
T Consensus 331 ~~ 332 (337)
T 3mdy_A 331 ES 332 (337)
T ss_dssp HT
T ss_pred hh
Confidence 64
No 66
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.4e-44 Score=347.85 Aligned_cols=258 Identities=27% Similarity=0.394 Sum_probs=214.2
Q ss_pred hhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEec
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEF 368 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 368 (581)
..++|++.+.||+|+||.||+|...+++.||+|++...... .+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 34678999999999999999999888899999999765422 25688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCcc
Q 008012 369 MPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448 (581)
Q Consensus 369 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 448 (581)
+++++|.+++......+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+|||.+....... ..
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~ 160 (267)
T 3t9t_A 85 MEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YT 160 (267)
T ss_dssp CTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HH
T ss_pred CCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-cc
Confidence 9999999999987777899999999999999999999 8999999999999999999999999999998653211 11
Q ss_pred eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccccchhhh
Q 008012 449 IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREE 527 (581)
Q Consensus 449 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (581)
......++..|+|||++.+..++.++||||||+++|+|++ |+.||..... ......+........+
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~i~~~~~~~~~----------- 227 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTGFRLYKP----------- 227 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHTTCCCCCC-----------
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--HHHHHHHhcCCcCCCC-----------
Confidence 1223456788999999988899999999999999999999 8999976321 1122222222111111
Q ss_pred hhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHH
Q 008012 528 NFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570 (581)
Q Consensus 528 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 570 (581)
..++..+.+++.+||+.||++|||++|++++|+++.+
T Consensus 228 ------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 228 ------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1234568899999999999999999999999999875
No 67
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.8e-43 Score=350.40 Aligned_cols=266 Identities=14% Similarity=0.129 Sum_probs=217.6
Q ss_pred hhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchHHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeeeEEE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
..++|++.+.||+|+||.||+|.. .+++.||+|++..... .+.+.+|+.+++++ +|++++++++++.+....++||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp ETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 457899999999999999999995 4799999999865532 24577899999999 8999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc-----EEEeeccCceec
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV-----AHVSDFGISKLL 441 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~-----~kl~Dfg~a~~~ 441 (581)
||+ +++|.+++...+..+++..++.++.||+.||+||| ++||+||||||+||+++.++. +||+|||++...
T Consensus 86 e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred Eec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 999 99999999987767899999999999999999999 899999999999999987765 999999999877
Q ss_pred CCCCCc-----ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccc-c-HHHHHHhhCCCC
Q 008012 442 GEGDDS-----VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM-N-LKNWVKESLPHG 514 (581)
Q Consensus 442 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~-~-~~~~~~~~~~~~ 514 (581)
...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||........ . ...........
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 240 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST- 240 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS-
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc-
Confidence 543321 123445789999999999999999999999999999999999999987432211 1 11111111000
Q ss_pred CCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 515 LPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
........+++.+.+++.+||+.||++|||++++++.|+++.++...
T Consensus 241 -------------~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 241 -------------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp -------------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred -------------cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 00111124567899999999999999999999999999999887654
No 68
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.1e-43 Score=350.02 Aligned_cols=253 Identities=30% Similarity=0.471 Sum_probs=207.6
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH----HH---HHHHHHHHHHHHhcCCCccceEeeeeecCC
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE----QA---FRSFNSECEVLRNVRHRNLIKILSSCCNTN 360 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~----~~---~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 360 (581)
..++|++.+.||+|+||.||+|... +++.||+|++..... .. .+.+.+|++++++++||||+++++++.+..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP 96 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC
Confidence 3578999999999999999999964 899999999865421 11 157889999999999999999999987665
Q ss_pred eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecCCCc-----EEEe
Q 008012 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP--VVHCDLKPSNILLDENMV-----AHVS 433 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dikp~Nill~~~~~-----~kl~ 433 (581)
++||||+++++|.+++.+....+++..++.++.|++.||+||| +.| |+||||||+||+++.++. +||+
T Consensus 97 --~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 --RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp --EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred --eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 6999999999999999887777899999999999999999999 888 999999999999987776 9999
Q ss_pred eccCceecCCCCCcceeeccccCccccCCCCC--CCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 008012 434 DFGISKLLGEGDDSVIQTMTIATIGYMAPEFG--SEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESL 511 (581)
Q Consensus 434 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~--~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 511 (581)
|||++..... ......|++.|+|||++ ....++.++|||||||++|+|++|+.||.............+....
T Consensus 172 Dfg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 246 (287)
T 4f0f_A 172 DFGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246 (287)
T ss_dssp CCTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC
T ss_pred CCCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC
Confidence 9999985432 23445789999999988 4556789999999999999999999999865433332222222211
Q ss_pred -CCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHh
Q 008012 512 -PHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568 (581)
Q Consensus 512 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 568 (581)
....+ ..+++.+.+++.+||+.||++|||++|+++.|+++
T Consensus 247 ~~~~~~-----------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 247 LRPTIP-----------------EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CCCCCC-----------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CCCCCC-----------------cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11111 13455788999999999999999999999999864
No 69
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=354.35 Aligned_cols=274 Identities=21% Similarity=0.283 Sum_probs=213.2
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCC--eeeEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN--FKALV 365 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 365 (581)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 467999999999999999999966 68999999997643 233466789999999999999999999987755 78999
Q ss_pred EeccCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----cCCCcEEEeeccCce
Q 008012 366 LEFMPNGSLDKWLYSHNY--FQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL----DENMVAHVSDFGISK 439 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill----~~~~~~kl~Dfg~a~ 439 (581)
|||+++++|.+++..... .+++..++.++.||+.||+||| +.||+||||||+||++ +.++.+||+|||++.
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999986432 3799999999999999999999 8999999999999999 788899999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCC--------CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccH--HHHHHh
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGS--------EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNL--KNWVKE 509 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~--~~~~~~ 509 (581)
....... .....|++.|+|||++. +..++.++|||||||++|||++|+.||.......... ...+..
T Consensus 165 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 241 (319)
T 4euu_A 165 ELEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (319)
T ss_dssp ECCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred ecCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence 7754332 23456899999999875 5788999999999999999999999997543222211 111222
Q ss_pred hCCCC-CCccccc---cc--hhh-hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhH
Q 008012 510 SLPHG-LPKIADA---NL--LRE-ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIR 569 (581)
Q Consensus 510 ~~~~~-~~~~~~~---~~--~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 569 (581)
..+.. +..+... .+ ... .........++..+.+++.+||+.||++|||++|++++..+..
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 22211 1111100 00 000 0011223466778999999999999999999999999988653
No 70
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.1e-44 Score=356.09 Aligned_cols=272 Identities=25% Similarity=0.373 Sum_probs=222.2
Q ss_pred chhhhHHHhhcCCCcCCeecccccccEEEEEe------CCCcEEEEEEeccch-HHHHHHHHHHHHHHHhc-CCCccceE
Q 008012 281 TSYLDLERATDGFNECNLLGSGGFGSVYKGIL------SDGTTVAIKIFNLQL-EQAFRSFNSECEVLRNV-RHRNLIKI 352 (581)
Q Consensus 281 ~~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~ 352 (581)
.....+....++|++.+.||+|+||.||+|.+ .+++.||+|+++... ....+.+.+|+.+++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455666778999999999999999999984 256889999997653 34556789999999999 79999999
Q ss_pred eeeeecCC-eeeEEEeccCCCCHHHHHhhCCCC---------------CCHHHHHHHHHHHHHHHHHHhcCCCCCceecC
Q 008012 353 LSSCCNTN-FKALVLEFMPNGSLDKWLYSHNYF---------------QDIPDRLNIMIDVALALEYLHHGHSTPVVHCD 416 (581)
Q Consensus 353 ~~~~~~~~-~~~lv~e~~~~~~L~~~l~~~~~~---------------~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~d 416 (581)
++++...+ ..++||||+++++|.+++...... +++..++.++.|++.||.||| +.||+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCccccc
Confidence 99987654 589999999999999999865432 688999999999999999999 89999999
Q ss_pred CCCCCeEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCc
Q 008012 417 LKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDE 495 (581)
Q Consensus 417 ikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~ 495 (581)
|||+||+++.++.+||+|||++................+++.|+|||++.+..++.++||||||+++|+|+| |..||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987755444444455678899999999988899999999999999999998 9999976
Q ss_pred cccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 496 MFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
..... .....+........+. .+++.+.+++.+||+.||++|||+.|++++|+++.+...
T Consensus 254 ~~~~~-~~~~~~~~~~~~~~~~-----------------~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 254 VKIDE-EFCRRLKEGTRMRAPD-----------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp CCCSH-HHHHHHHHTCCCCCCT-----------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred cchhH-HHHHHhccCccCCCCC-----------------CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 43222 2222222222111111 234568899999999999999999999999999986543
No 71
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.9e-43 Score=358.90 Aligned_cols=250 Identities=25% Similarity=0.326 Sum_probs=205.6
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3478999999999999999999965 78999999997653 2234678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
||||++||+|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 93 v~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp EECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 999999999999998754 4789999999999999999999 899999999999999999999999999999876433
Q ss_pred CCcceeeccccCccccCCCCCCC---CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhh--CCCCCCccc
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSE---GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES--LPHGLPKIA 519 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~--~~~~~~~~~ 519 (581)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ......... .....+
T Consensus 169 ~---~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~--~~~~~~~~~~~~~~~~p--- 240 (384)
T 4fr4_A 169 T---QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSST--SSKEIVHTFETTVVTYP--- 240 (384)
T ss_dssp C---CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTS--CHHHHHHHHHHCCCCCC---
T ss_pred C---ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHhhcccCCC---
Confidence 2 2345679999999998864 46899999999999999999999999753222 222222211 111111
Q ss_pred cccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCC-HHHHHHH
Q 008012 520 DANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLY-MKDAATK 564 (581)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~ 564 (581)
..++..+.++|.+||+.||++||+ ++++++|
T Consensus 241 --------------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 241 --------------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp --------------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred --------------CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 123456889999999999999998 7777653
No 72
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=5.2e-44 Score=361.54 Aligned_cols=251 Identities=22% Similarity=0.248 Sum_probs=202.4
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCee
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFK 362 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 362 (581)
...++|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+.+|.++++.+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34578999999999999999999965 78999999998653 23345678899999998 799999999999999999
Q ss_pred eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 363 ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
|+||||++||+|.+++...+. +++..++.++.||+.||+||| ++||+||||||+|||++.++.+||+|||+++...
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSRR-FDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 999999999999999987644 789999999999999999999 8999999999999999999999999999998543
Q ss_pred CCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... .++.
T Consensus 176 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~~-~~p~----- 245 (353)
T 3txo_A 176 CNG--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--DDLFEAILNDEV-VYPT----- 245 (353)
T ss_dssp C-----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-CCCT-----
T ss_pred cCC--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--HHHHHHHHcCCC-CCCC-----
Confidence 222 223455799999999999988999999999999999999999999976422 122222221111 1111
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCH------HHHHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYM------KDAATK 564 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~~ 564 (581)
.++..+.+++.+||..||++||++ +|+++|
T Consensus 246 ------------~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 246 ------------WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp ------------TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred ------------CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 133457899999999999999998 777765
No 73
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=356.27 Aligned_cols=253 Identities=20% Similarity=0.263 Sum_probs=208.2
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHH------HHHHHHHHHHHHHhcCCCccceEeeeeecCCe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQ------AFRSFNSECEVLRNVRHRNLIKILSSCCNTNF 361 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 361 (581)
..+.|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 88 (326)
T 2y0a_A 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD 88 (326)
T ss_dssp HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 4467899999999999999999965 7999999998764311 24678899999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----cEEEeeccC
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM----VAHVSDFGI 437 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~----~~kl~Dfg~ 437 (581)
.++||||+++++|.+++.... .+++..++.++.||+.||.||| +.||+||||||+||+++.++ .+||+|||+
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 999999999999999997654 4789999999999999999999 89999999999999999877 899999999
Q ss_pred ceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCc
Q 008012 438 SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPK 517 (581)
Q Consensus 438 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 517 (581)
+........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+..... ..+
T Consensus 165 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~~-~~~- 237 (326)
T 2y0a_A 165 AHKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANVSAVNY-EFE- 237 (326)
T ss_dssp CEECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHTCC-CCC-
T ss_pred CeECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--HHHHHHHhcCC-CcC-
Confidence 987753322 23456899999999999999999999999999999999999999763221 11111111110 000
Q ss_pred cccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 518 IADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
......++..+.++|.+||..||++|||+.|+++|
T Consensus 238 ------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 238 ------------DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp ------------HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred ------------ccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01122345678899999999999999999999986
No 74
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-43 Score=349.97 Aligned_cols=264 Identities=23% Similarity=0.411 Sum_probs=217.0
Q ss_pred hhcCCCcCC-eecccccccEEEEEeC---CCcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 289 ATDGFNECN-LLGSGGFGSVYKGILS---DGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 289 ~~~~y~~~~-~lg~G~~~~v~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
..++|.+.+ .||+|+||.||+|.+. ++..||+|+++.. .....+.+.+|++++++++||||+++++++ ..+..+
T Consensus 7 ~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 7 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp CGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred cHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 345677776 8999999999999853 6788999999764 345567899999999999999999999999 456689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||+++++|.+++......+++..++.++.|++.||.||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 999999999999999877677899999999999999999999 89999999999999999999999999999988754
Q ss_pred CCCcc-eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 444 GDDSV-IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 444 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
..... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+........+
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i~~~~~~~~~----- 235 (287)
T 1u59_A 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQGKRMECP----- 235 (287)
T ss_dssp CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHHHTTCCCCCC-----
T ss_pred CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHhcCCcCCCC-----
Confidence 33221 1223356889999999988889999999999999999999 9999976422 2222223222111111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHhh
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLED 575 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 575 (581)
..+++.+.++|.+||..||++|||+.|++++|+++......+
T Consensus 236 ------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 236 ------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp ------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred ------------CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 134567889999999999999999999999999998877654
No 75
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.7e-43 Score=355.95 Aligned_cols=265 Identities=17% Similarity=0.162 Sum_probs=214.1
Q ss_pred hhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchHHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeeeEEE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
..++|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 347899999999999999999996 4799999999875532 23578899999999 9999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc-----EEEeeccCceec
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV-----AHVSDFGISKLL 441 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~-----~kl~Dfg~a~~~ 441 (581)
||+ +++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++. +||+|||++..+
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred EeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 999 99999999976667899999999999999999999 889999999999999998887 999999999976
Q ss_pred CCCCCcc-----eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCC
Q 008012 442 GEGDDSV-----IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLP 516 (581)
Q Consensus 442 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 516 (581)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+.+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~--~~~~~~~~i~~~~-- 236 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKAD--TLKERYQKIGDTK-- 236 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCS--SHHHHHHHHHHHH--
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccc--cHHHHHHHHHhhh--
Confidence 4433211 123557999999999999999999999999999999999999999874322 1111111110000
Q ss_pred ccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 517 KIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
...+.......++ ++.+++..||+.||.+||+++++.+.|+++.++.
T Consensus 237 --------~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 237 --------RATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp --------HHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred --------ccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 0000000111244 7899999999999999999999999999887765
No 76
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=352.15 Aligned_cols=258 Identities=28% Similarity=0.404 Sum_probs=203.9
Q ss_pred hcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEecc
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFM 369 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 369 (581)
.++|++.+.||+|+||.||+|... ++.||+|++.... ..+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 467889999999999999999986 7899999997653 34678899999999999999999998874 478999999
Q ss_pred CCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc-EEEeeccCceecCCCCC
Q 008012 370 PNGSLDKWLYSHNY--FQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV-AHVSDFGISKLLGEGDD 446 (581)
Q Consensus 370 ~~~~L~~~l~~~~~--~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~-~kl~Dfg~a~~~~~~~~ 446 (581)
++++|.+++..... ..++..++.++.|+++||+|||+.+.+||+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999986543 4688899999999999999999433389999999999999998886 799999999765322
Q ss_pred cceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhh
Q 008012 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526 (581)
Q Consensus 447 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (581)
.....|++.|+|||++.+..++.++||||||+++|||++|+.||.............+........
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 225 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL----------- 225 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCC-----------
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCc-----------
Confidence 223468999999999999999999999999999999999999997643222111111111111111
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 527 ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 527 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
...++..+.+++.+||+.||++|||++|++++|+.+...+..
T Consensus 226 ------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 226 ------IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp ------BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred ------ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 112345688999999999999999999999999999876654
No 77
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.7e-43 Score=353.30 Aligned_cols=270 Identities=26% Similarity=0.425 Sum_probs=206.5
Q ss_pred hhhHHHhhcCCCcCCeecccccccEEEEEeC----CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeee
Q 008012 283 YLDLERATDGFNECNLLGSGGFGSVYKGILS----DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSC 356 (581)
Q Consensus 283 ~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~----~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 356 (581)
..++....++|.+.+.||+|+||.||+|... +++.||+|+++.. .....+.+.+|+.++++++||||+++++++
T Consensus 26 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 105 (313)
T 3brb_A 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVC 105 (313)
T ss_dssp TTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred HHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence 3445556788999999999999999999854 3458999998754 345567789999999999999999999998
Q ss_pred ecCC-----eeeEEEeccCCCCHHHHHhh-----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC
Q 008012 357 CNTN-----FKALVLEFMPNGSLDKWLYS-----HNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE 426 (581)
Q Consensus 357 ~~~~-----~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~ 426 (581)
.+.+ ..++||||+++++|.+++.. ....+++..++.++.||+.||.||| +.||+||||||+||+++.
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~ 182 (313)
T 3brb_A 106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRD 182 (313)
T ss_dssp EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECT
T ss_pred eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcC
Confidence 7755 35999999999999999953 2345899999999999999999999 899999999999999999
Q ss_pred CCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHH
Q 008012 427 NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKN 505 (581)
Q Consensus 427 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~ 505 (581)
++.+||+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |..||...... ....
T Consensus 183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~ 260 (313)
T 3brb_A 183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYD 260 (313)
T ss_dssp TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH
T ss_pred CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHH
Confidence 99999999999987654433333344567889999999999999999999999999999999 88998764222 2222
Q ss_pred HHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 506 WVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
.+........+ ..+++.+.+++.+||..||++|||+.+++++|+++.+..++
T Consensus 261 ~~~~~~~~~~~-----------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 261 YLLHGHRLKQP-----------------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp HHHTTCCCCCB-----------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred HHHcCCCCCCC-----------------ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 22222111111 13445688999999999999999999999999999887653
No 78
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=6.1e-44 Score=358.31 Aligned_cols=260 Identities=24% Similarity=0.416 Sum_probs=208.6
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcE----EEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTT----VAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
.++|++.+.||+|+||.||+|.+. +++. ||+|.+.... ......+.+|+.++++++||||+++++++. .+..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 467899999999999999999964 4554 7788775432 222345678999999999999999999986 45689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||+++|+|.+++......+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999999877666889999999999999999999 88999999999999999999999999999998765
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
...........++..|+|||++.+..++.++|||||||++|+|+| |+.||..... ......+........+..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~---- 241 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLEKGERLAQPQI---- 241 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--THHHHHHHTTCBCCCCTT----
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--HHHHHHHHcCCCCCCCCc----
Confidence 544444455678889999999998899999999999999999999 9999986422 223333332222111111
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
++..+.+++.+||..||++|||+.|++++|+++....
T Consensus 242 -------------~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 242 -------------CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp -------------BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred -------------CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 2334668999999999999999999999999886543
No 79
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=9.6e-44 Score=350.67 Aligned_cols=267 Identities=24% Similarity=0.377 Sum_probs=221.9
Q ss_pred hhhHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCe
Q 008012 283 YLDLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNF 361 (581)
Q Consensus 283 ~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 361 (581)
+.+++...++|++.+.||+|+||.||+|.+. ++..||+|++..... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 83 (288)
T 3kfa_A 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 83 (288)
T ss_dssp CCTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3455567788999999999999999999976 588999999976543 34678899999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 362 KALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
.++||||+++++|.+++... ...+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL 160 (288)
T ss_dssp EEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCcccee
Confidence 99999999999999999864 345789999999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccc
Q 008012 441 LGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIA 519 (581)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (581)
..... ........+++.|+|||++.+..++.++||||||+++|+|++ |..||..... ......+........+
T Consensus 161 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~--~~~~~~~~~~~~~~~~--- 234 (288)
T 3kfa_A 161 MTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKDYRMERP--- 234 (288)
T ss_dssp SCSSS-SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCCCCC---
T ss_pred ccCCc-cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhccCCCCCC---
Confidence 64332 223344457889999999988899999999999999999999 9999976322 2233333322221111
Q ss_pred cccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 520 DANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
..+++.+.+++.+||..||++|||++|+++.|+++..+..
T Consensus 235 --------------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 235 --------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp --------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --------------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 1344568899999999999999999999999999887654
No 80
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=359.24 Aligned_cols=255 Identities=24% Similarity=0.364 Sum_probs=201.2
Q ss_pred HhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCC--CccceEeeeeecCCeee
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRH--RNLIKILSSCCNTNFKA 363 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~~~~~~~~~ 363 (581)
...++|++.+.||+|+||.||+|...+++.||+|++... .....+.+.+|++++++++| |||+++++++.+.+..+
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 85 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence 345679999999999999999999888999999998754 34556788999999999976 99999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+|||+ .+++|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++ ++.+||+|||++.....
T Consensus 86 lv~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 86 MVMEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 99995 5789999998765 4788999999999999999999 88999999999999997 67899999999987754
Q ss_pred CCCcceeeccccCccccCCCCCCC-----------CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSE-----------GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLP 512 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 512 (581)
...........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.............+.....
T Consensus 160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~ 239 (343)
T 3dbq_A 160 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHE 239 (343)
T ss_dssp ----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSC
T ss_pred ccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcc
Confidence 443333445679999999998754 678999999999999999999999997643322222222222221
Q ss_pred CCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 513 HGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
...+.. .+..+.+++.+||+.||++|||+.|+++|-
T Consensus 240 ~~~~~~-----------------~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 240 IEFPDI-----------------PEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CCCCCC-----------------SCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cCCccc-----------------CCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 111111 124577999999999999999999999874
No 81
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.3e-44 Score=358.15 Aligned_cols=248 Identities=24% Similarity=0.366 Sum_probs=204.2
Q ss_pred hhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchHH---HHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQ---AFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|.+.+.||+|+||.||+|.. .+++.||+|++...... ....+.+|+++++.++||||+++++++.+.+..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 357899999999999999999996 48999999999765322 23478899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
||||+ +|+|.+++...+. +++..++.++.||+.||+||| +.||+||||||+||++++++.+||+|||++......
T Consensus 87 v~E~~-~g~l~~~l~~~~~-l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEKKR-MTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EECCC-CEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EEECC-CCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 99999 7799998876544 789999999999999999999 889999999999999999999999999999876433
Q ss_pred CCcceeeccccCccccCCCCCCCCCC-CccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNV-SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
.. .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||........ ...+....
T Consensus 162 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------------~~~i~~~~- 224 (336)
T 3h4j_B 162 NF---LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------------FKKVNSCV- 224 (336)
T ss_dssp BT---TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-------------BCCCCSSC-
T ss_pred cc---cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-------------HHHHHcCC-
Confidence 21 234579999999999988776 7899999999999999999999976322111 00000000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...+..+++.+.++|.+||..||++|||++|++++
T Consensus 225 ------~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 ------YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp ------CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ------CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00111234568899999999999999999999886
No 82
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-43 Score=350.37 Aligned_cols=246 Identities=26% Similarity=0.326 Sum_probs=206.4
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH---HHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
.++|++.+.||+|+||.||+|+.+ +|+.||+|+++.... ...+.+.+|..+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467999999999999999999965 799999999976532 2345678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||+++|+|.+++..... +++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||++......
T Consensus 85 ~e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQR-FPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTSS-CCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 999999999999987654 788999999999999999999 899999999999999999999999999999876432
Q ss_pred CcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchh
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR 525 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (581)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......... ..++.
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~--~~~p~-------- 224 (318)
T 1fot_A 160 ----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-KTYEKILNAE--LRFPP-------- 224 (318)
T ss_dssp ----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHCC--CCCCT--------
T ss_pred ----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCC--CCCCC--------
Confidence 23457899999999999999999999999999999999999999763211 1111111111 11111
Q ss_pred hhhhhhHHHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 008012 526 EENFFSARMDCLLSIFHLALDCCAELPDQRL-----YMKDAATK 564 (581)
Q Consensus 526 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 564 (581)
.++.++.+++.+||..||++|| +++|+++|
T Consensus 225 ---------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 225 ---------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ---------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---------CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 2334678999999999999999 89999876
No 83
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.8e-43 Score=370.20 Aligned_cols=256 Identities=28% Similarity=0.410 Sum_probs=212.5
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCC-eeeE
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN-FKAL 364 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~l 364 (581)
++...++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++...+ ..++
T Consensus 188 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 188 WALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred cccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 4455678999999999999999999986 7899999998664 3467899999999999999999999987655 7899
Q ss_pred EEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 365 VLEFMPNGSLDKWLYSHNY-FQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
||||+++|+|.+++...+. .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 265 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 9999999999999986544 3688999999999999999999 89999999999999999999999999999986432
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
.. ....++..|+|||++.+..++.++|||||||++|||+| |+.||...... .....+.......
T Consensus 342 ~~-----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~~~-------- 406 (450)
T 1k9a_A 342 TQ-----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYKMD-------- 406 (450)
T ss_dssp ----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHHTTCCCC--------
T ss_pred cc-----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCC--------
Confidence 21 22356889999999999999999999999999999998 99999764322 2222232221111
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
.+..+++.+.++|.+||+.||++|||+.++++.|+++...
T Consensus 407 ---------~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 407 ---------APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp ---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---------CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 1124566789999999999999999999999999998754
No 84
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.1e-43 Score=359.93 Aligned_cols=252 Identities=20% Similarity=0.272 Sum_probs=204.0
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeee
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 363 (581)
..++|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+.+|..+++++ +||||+++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 4568999999999999999999965 68899999997653 33345678899999887 8999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||+++|+|.+++...+. +++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++....
T Consensus 130 lV~E~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEcCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 99999999999999987544 789999999999999999999 89999999999999999999999999999985322
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc----cc---HHHHHHhhCCCCCC
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE----MN---LKNWVKESLPHGLP 516 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~----~~---~~~~~~~~~~~~~~ 516 (581)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .. +.+.+... ...++
T Consensus 206 ~~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-~~~~p 282 (396)
T 4dc2_A 206 PG--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIP 282 (396)
T ss_dssp TT--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC-CCCCC
T ss_pred CC--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc-ccCCC
Confidence 22 22345679999999999999999999999999999999999999996432111 01 11111111 11111
Q ss_pred ccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCH------HHHHHH
Q 008012 517 KIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYM------KDAATK 564 (581)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~~ 564 (581)
..++..+.++|.+||+.||++||++ +|+++|
T Consensus 283 -----------------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 283 -----------------RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp -----------------TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred -----------------CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 1234568899999999999999996 566665
No 85
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=8.1e-44 Score=351.12 Aligned_cols=267 Identities=22% Similarity=0.286 Sum_probs=204.7
Q ss_pred cCCCcCCeecccccccEEEEEeCCCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEec
Q 008012 291 DGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEF 368 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 368 (581)
++|++.+.||+|+||.||+|...+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5789999999999999999998889999999986543 22235678999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCcc
Q 008012 369 MPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448 (581)
Q Consensus 369 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 448 (581)
+++ +|.+++......+++..+..++.|++.||+||| ++||+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-- 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc--
Confidence 976 999999877667899999999999999999999 89999999999999999999999999999987643221
Q ss_pred eeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC---CCccc-----
Q 008012 449 IQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG---LPKIA----- 519 (581)
Q Consensus 449 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~----- 519 (581)
......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+........... .+...
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCChhhchhhhccccc
Confidence 2234568999999998865 46899999999999999999999999764222 12222222111110 11100
Q ss_pred cccch--hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 520 DANLL--REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 520 ~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
++... ...+.......+++.+.+++.+||+.||++|||++|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 0000001112355678899999999999999999999875
No 86
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.9e-43 Score=360.68 Aligned_cols=247 Identities=22% Similarity=0.289 Sum_probs=201.7
Q ss_pred CCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEeccCCCCH
Q 008012 296 CNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPNGSL 374 (581)
Q Consensus 296 ~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 374 (581)
.+.||+|+||.||+|... +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 567999999999999964 7999999999877666667899999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe--cCCCcEEEeeccCceecCCCCCcceeec
Q 008012 375 DKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL--DENMVAHVSDFGISKLLGEGDDSVIQTM 452 (581)
Q Consensus 375 ~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 452 (581)
.+++......+++..++.++.||+.||+||| +.||+||||||+||++ +.++.+||+|||++........ ...
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~~ 247 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LKV 247 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CCC
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---ccc
Confidence 9999877666899999999999999999999 8999999999999999 5678999999999997754332 234
Q ss_pred cccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhhhhhhhH
Q 008012 453 TIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSA 532 (581)
Q Consensus 453 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (581)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+..+...... .+ . ..
T Consensus 248 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~--~~---~----------~~ 311 (373)
T 2x4f_A 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-AETLNNILACRWD--LE---D----------EE 311 (373)
T ss_dssp CCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCC--SC---S----------GG
T ss_pred ccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCC--CC---h----------hh
Confidence 4689999999999999999999999999999999999999976422 1122222221111 00 0 01
Q ss_pred HHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 533 RMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 533 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...+++.+.++|.+||..||++|||+.|+++|
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 12345678899999999999999999999985
No 87
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=359.36 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=193.3
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEE
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
...++|++.+.||+|+||.||+|... +++.||+|+++... ..+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 45678999999999999999999976 68899999998654 2356889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCcEEEeeccCceecCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE---NMVAHVSDFGISKLLGE 443 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~---~~~~kl~Dfg~a~~~~~ 443 (581)
||+++++|.+++...+. +++..++.++.||+.||+||| +.||+||||||+||+++. ++.+||+|||++.....
T Consensus 128 e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 128 ELVTGGELFDRIVEKGY-YSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCCSCBHHHHHTTCSS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred EeCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999986543 789999999999999999999 889999999999999975 88999999999986543
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||................... ....
T Consensus 204 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~-~~~~------ 273 (349)
T 2w4o_A 204 QV---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY-FISP------ 273 (349)
T ss_dssp ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC-CCTT------
T ss_pred cc---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc-cCCc------
Confidence 22 2234568999999999999999999999999999999999999997643222122222111110 0000
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...+++..+.++|.+||..||++|||+.|++++
T Consensus 274 --------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 274 --------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp --------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011345568899999999999999999999985
No 88
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.8e-43 Score=360.39 Aligned_cols=278 Identities=20% Similarity=0.179 Sum_probs=216.0
Q ss_pred hhccccchhhhHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcC-----CCc
Q 008012 275 LATWRRTSYLDLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-----HRN 348 (581)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~~ 348 (581)
......+++.+.....++|++.+.||+|+||.||+|... +++.||+|+++... .....+..|+++++.+. |||
T Consensus 19 ~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~ 97 (360)
T 3llt_A 19 DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNN 97 (360)
T ss_dssp -CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred CccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCC
Confidence 345566777777888899999999999999999999964 78999999997543 33456778999999996 999
Q ss_pred cceEeeeeecCCeeeEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-
Q 008012 349 LIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE- 426 (581)
Q Consensus 349 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~- 426 (581)
|+++++++...+..++||||+ +++|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+||+++.
T Consensus 98 iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~ 173 (360)
T 3llt_A 98 IVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDP 173 (360)
T ss_dssp BCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCT
T ss_pred eecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccc
Confidence 999999999999999999999 889999998654 34789999999999999999999 899999999999999975
Q ss_pred ------------------------CCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHH
Q 008012 427 ------------------------NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGIL 482 (581)
Q Consensus 427 ------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~v 482 (581)
++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 248 (360)
T 3llt_A 174 YFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248 (360)
T ss_dssp TCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred cccccccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHH
Confidence 7899999999998754322 34568999999999999999999999999999
Q ss_pred HHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccccc-----------------chhhhhh-----------hhHHH
Q 008012 483 LLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN-----------------LLREENF-----------FSARM 534 (581)
Q Consensus 483 l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-----------~~~~~ 534 (581)
+|+|++|+.||..... ......+............... +...... .....
T Consensus 249 l~ell~g~~pf~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 326 (360)
T 3llt_A 249 LAELYTGSLLFRTHEH--MEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKI 326 (360)
T ss_dssp HHHHHHSSCSCCCSSH--HHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHH
T ss_pred HHHHHHCCCCCCCCcH--HHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhccccccc
Confidence 9999999999976322 1222222222111110000000 0000000 00001
Q ss_pred HHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 535 DCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 535 ~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...+.+.+++.+||+.||++|||++|+++|
T Consensus 327 ~~~~~l~~li~~~L~~dP~~Rpta~elL~h 356 (360)
T 3llt_A 327 IKHELFCDFLYSILQIDPTLRPSPAELLKH 356 (360)
T ss_dssp CCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred chHHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 122568899999999999999999999875
No 89
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=6.8e-44 Score=363.72 Aligned_cols=274 Identities=15% Similarity=0.150 Sum_probs=211.3
Q ss_pred HhhcCCCcCCeecccccccEEEEEeCC------CcEEEEEEeccchHHHH-----------HHHHHHHHHHHhcCCCccc
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILSD------GTTVAIKIFNLQLEQAF-----------RSFNSECEVLRNVRHRNLI 350 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~~iv 350 (581)
...++|++.+.||+|+||.||+|.+.+ ++.||+|++........ .....|+..++.++||||+
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv 111 (364)
T 3op5_A 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP 111 (364)
T ss_dssp TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence 345689999999999999999999753 47899999876542111 1233456667777899999
Q ss_pred eEeeeeecC----CeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-
Q 008012 351 KILSSCCNT----NFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLD- 425 (581)
Q Consensus 351 ~~~~~~~~~----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~- 425 (581)
++++++... ...++||||+ +++|.+++......+++..++.++.||+.||+||| +.||+||||||+|||++
T Consensus 112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNY 187 (364)
T ss_dssp CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEES
T ss_pred eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEec
Confidence 999998764 4589999999 99999999987777899999999999999999999 88999999999999999
Q ss_pred -CCCcEEEeeccCceecCCCCCcc-----eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccc
Q 008012 426 -ENMVAHVSDFGISKLLGEGDDSV-----IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTG 499 (581)
Q Consensus 426 -~~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~ 499 (581)
.++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 88999999999998764322111 113345999999999999999999999999999999999999999864332
Q ss_pred cccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 500 EMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
. .............+..+.+..+ ....++.++.+++..||..||++||+++++++.|+++.++...
T Consensus 268 ~-~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~ 333 (364)
T 3op5_A 268 P-KYVRDSKIRYRENIASLMDKCF--------PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGS 333 (364)
T ss_dssp H-HHHHHHHHHHHHCHHHHHHHHS--------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred H-HHHHHHHHHhhhhHHHHHHHhc--------ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 2 1121122111111111111100 0023467899999999999999999999999999999876543
No 90
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=8.4e-44 Score=357.73 Aligned_cols=269 Identities=25% Similarity=0.323 Sum_probs=214.4
Q ss_pred hcCCCcCCeecccccccEEEEEe-----CCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeee--cCCee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGIL-----SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC--NTNFK 362 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~ 362 (581)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++. +.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 36789999999999999999984 368899999998877777788999999999999999999999886 45678
Q ss_pred eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 363 ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
++||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999999876556899999999999999999999 8999999999999999999999999999999875
Q ss_pred CCCCcc-eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc----------ccHHHHHHhhC
Q 008012 443 EGDDSV-IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE----------MNLKNWVKESL 511 (581)
Q Consensus 443 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~----------~~~~~~~~~~~ 511 (581)
...... ......++..|+|||++.+..++.++||||||+++|+|++|+.||....... ...........
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHH
T ss_pred cCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhh
Confidence 433322 2233467888999999988889999999999999999999999986532110 00001000000
Q ss_pred CCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHhh
Q 008012 512 PHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLED 575 (581)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 575 (581)
.. .....+..+++.+.+++.+||+.||++|||++|++++|+.+.......
T Consensus 259 ~~--------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 259 EG--------------QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp TT--------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred cc--------------cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 00 001112245667899999999999999999999999999997765543
No 91
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.3e-43 Score=357.22 Aligned_cols=252 Identities=24% Similarity=0.309 Sum_probs=206.0
Q ss_pred HHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCe
Q 008012 287 ERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNF 361 (581)
Q Consensus 287 ~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~ 361 (581)
....++|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+..|..+++.+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 445688999999999999999999975 78999999997653 22345678899999887 99999999999999999
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceec
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
.|+||||++||+|.+++...+. +++..+..++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 9999999999999999987543 789999999999999999999 899999999999999999999999999999864
Q ss_pred CCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 442 GEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 442 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... ..++.
T Consensus 169 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~-~~~p~---- 239 (345)
T 1xjd_A 169 MLGDA--KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRMDN-PFYPR---- 239 (345)
T ss_dssp CCTTC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-CCCCT----
T ss_pred ccCCC--cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHhCC-CCCCc----
Confidence 32221 23456799999999999999999999999999999999999999976322 11222222111 11111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHH-HHHHH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMK-DAATK 564 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl~~ 564 (581)
.++..+.++|.+||..||++||++. |+++|
T Consensus 240 -------------~~s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 240 -------------WLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp -------------TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred -------------ccCHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 1345678999999999999999998 77654
No 92
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=6.8e-43 Score=343.31 Aligned_cols=263 Identities=21% Similarity=0.334 Sum_probs=212.3
Q ss_pred HhhcCCCcCCeecccccccEEEEEeCC----CcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCee
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILSD----GTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFK 362 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 362 (581)
...++|++.+.||+|+||.||+|.+.. +..||+|++... .....+.+.+|+.++++++||||+++++++.+. ..
T Consensus 9 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~ 87 (281)
T 3cc6_A 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PT 87 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SC
T ss_pred ecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CC
Confidence 346789999999999999999998542 346999998765 344567899999999999999999999998654 56
Q ss_pred eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 363 ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
++||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+....
T Consensus 88 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 8999999999999999877666899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
.... .......+++.|+|||++.+..++.++||||||+++|+|++ |+.||...... .....+........+
T Consensus 165 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~~~~~~~~----- 236 (281)
T 3cc6_A 165 DEDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEKGDRLPKP----- 236 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHHTCCCCCC-----
T ss_pred cccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhcCCCCCCC-----
Confidence 3221 12234457889999999988899999999999999999998 99999753222 223333322211111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
..+++.+.+++.+||+.||++|||+.|++++|+++.+...+
T Consensus 237 ------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 277 (281)
T 3cc6_A 237 ------------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277 (281)
T ss_dssp ------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhhh
Confidence 12345688999999999999999999999999999876543
No 93
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.6e-43 Score=362.84 Aligned_cols=269 Identities=19% Similarity=0.240 Sum_probs=208.8
Q ss_pred HhhcCCCcCCeeccc--ccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCee
Q 008012 288 RATDGFNECNLLGSG--GFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFK 362 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G--~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 362 (581)
...++|++.+.||+| +||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 446789999999999 99999999976 79999999997653 45567888999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceec
Q 008012 363 ALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
++||||+++|+|.+++... ...+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||.+...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999999865 345799999999999999999999 899999999999999999999999999998754
Q ss_pred CCCCC-----cceeeccccCccccCCCCCCC--CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC
Q 008012 442 GEGDD-----SVIQTMTIATIGYMAPEFGSE--GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG 514 (581)
Q Consensus 442 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 514 (581)
..... ........|++.|+|||++.+ ..++.++|||||||++|||++|+.||........ .........+
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~-- 255 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVP-- 255 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-HHHC--------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHhcCCCC--
Confidence 32211 111223468899999998887 6799999999999999999999999976432221 1111111110
Q ss_pred CCcccccc-------------------------------chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHH
Q 008012 515 LPKIADAN-------------------------------LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAAT 563 (581)
Q Consensus 515 ~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 563 (581)
...+.. ........+....+++.+.+||.+||+.||++|||++|+++
T Consensus 256 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 256 --CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000000 00000111223345677999999999999999999999998
Q ss_pred H
Q 008012 564 K 564 (581)
Q Consensus 564 ~ 564 (581)
|
T Consensus 334 h 334 (389)
T 3gni_B 334 H 334 (389)
T ss_dssp S
T ss_pred C
Confidence 7
No 94
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.7e-43 Score=348.45 Aligned_cols=267 Identities=22% Similarity=0.311 Sum_probs=205.5
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc---hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|... +|+.||+|++... .......+.+|+.++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3467999999999999999999964 7999999998753 34556788999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceec
Q 008012 365 VLEFMPNGSLDKWLYS---HNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
||||+++++|.+++.. ....+++..++.++.|++.||.||| +.|++||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999974 3455789999999999999999999 899999999999999999999999999999866
Q ss_pred CCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 442 GEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 442 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
..... ......+++.|+|||++.+..++.++||||||+++|+|++|+.||.............+.. ...+....
T Consensus 187 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~- 260 (310)
T 2wqm_A 187 SSKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ---CDYPPLPS- 260 (310)
T ss_dssp --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHT---TCSCCCCT-
T ss_pred cCCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhc---ccCCCCcc-
Confidence 43221 2234468999999999999999999999999999999999999997532222222222221 11111110
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHhhc
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDA 576 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~ 576 (581)
..++..+.+++.+||+.||++|||+.++++.|+++.+...++-
T Consensus 261 ------------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~ 303 (310)
T 2wqm_A 261 ------------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL 303 (310)
T ss_dssp ------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred ------------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence 1234568899999999999999999999999999998876653
No 95
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.8e-43 Score=352.30 Aligned_cols=265 Identities=25% Similarity=0.418 Sum_probs=214.4
Q ss_pred hcCC-CcCCeecccccccEEEEEeC-----CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeec--CC
Q 008012 290 TDGF-NECNLLGSGGFGSVYKGILS-----DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCN--TN 360 (581)
Q Consensus 290 ~~~y-~~~~~lg~G~~~~v~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~ 360 (581)
.++| ++++.||+|+||.||++.+. +++.||+|+++... ....+.+.+|++++++++||||+++++++.+ ..
T Consensus 29 ~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (318)
T 3lxp_A 29 HKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA 108 (318)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT
T ss_pred cHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc
Confidence 3455 89999999999999988642 68899999998653 4556779999999999999999999999987 46
Q ss_pred eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..++||||+++++|.+++.... +++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++..
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 109 SLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred eEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence 7899999999999999998764 789999999999999999999 89999999999999999999999999999998
Q ss_pred cCCCCCc-ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccc----------c---HHHH
Q 008012 441 LGEGDDS-VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM----------N---LKNW 506 (581)
Q Consensus 441 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~----------~---~~~~ 506 (581)
....... .......++..|+|||++.+..++.++||||||+++|+|++|+.||........ . ....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 7544322 123345678889999999988999999999999999999999999865321100 0 0001
Q ss_pred HHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHhhc
Q 008012 507 VKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLEDA 576 (581)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~ 576 (581)
+..... ...+..++..+.++|.+||+.||++|||++|+++.|+++.+++..+.
T Consensus 264 ~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~~ 316 (318)
T 3lxp_A 264 LERGER-----------------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQA 316 (318)
T ss_dssp HHTTCC-----------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC--
T ss_pred HhcccC-----------------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccCC
Confidence 111100 01122355678999999999999999999999999999999998764
No 96
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-43 Score=354.88 Aligned_cols=259 Identities=25% Similarity=0.420 Sum_probs=204.5
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcE----EEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTT----VAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~----vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
.++|++.+.||+|+||.||+|.+. +++. |++|.+... .....+.+.+|+.++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 468999999999999999999954 5554 467766433 2234467889999999999999999999998765 78
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+|+||+++|+|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999987777899999999999999999999 89999999999999999999999999999987754
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
...........+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+........+
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~~~~~~~~------ 241 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP------ 241 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCCCCC------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcCCCCCCC------
Confidence 444333444567889999999999999999999999999999999 9999976422 2333333332211111
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
..++..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 242 -----------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 242 -----------PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -----------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -----------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 12345688999999999999999999999999998754
No 97
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.4e-43 Score=361.16 Aligned_cols=252 Identities=23% Similarity=0.370 Sum_probs=200.5
Q ss_pred hcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcC--CCccceEeeeeecCCeeeEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVR--HRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~~~~~lv 365 (581)
.++|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++...+..++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 4569999999999999999999888999999998654 3455678999999999996 59999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|| +.+++|.+++.... .+++..++.++.||+.||.||| +.||+||||||+|||++ ++.+||+|||++..+....
T Consensus 135 ~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp EE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred Ee-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 99 56889999998765 4788899999999999999999 89999999999999995 5899999999998765443
Q ss_pred CcceeeccccCccccCCCCCCC-----------CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC
Q 008012 446 DSVIQTMTIATIGYMAPEFGSE-----------GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG 514 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 514 (581)
.........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........+...+.......
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~ 288 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIE 288 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCC
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCC
Confidence 3333445679999999998754 46889999999999999999999999764322222222222111111
Q ss_pred CCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 515 LPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+.. .+..+.++|.+||..||++|||+.|++++
T Consensus 289 ~~~~-----------------~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 289 FPDI-----------------PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCC-----------------SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCcc-----------------chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111 13457899999999999999999999986
No 98
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=9.7e-43 Score=351.47 Aligned_cols=251 Identities=20% Similarity=0.271 Sum_probs=205.1
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc---hHHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeeeE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l 364 (581)
.++|++.+.||+|+||.||+|+.+ +++.||+|+++.. .....+.+.+|..+++++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 467899999999999999999965 7899999999765 244556788999999998 89999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
||||+++|+|.+++...+ .+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++.....
T Consensus 88 v~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999998654 3789999999999999999999 899999999999999999999999999999864322
Q ss_pred CCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc----cc---HHHHHHhhCCCCCCc
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE----MN---LKNWVKESLPHGLPK 517 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~----~~---~~~~~~~~~~~~~~~ 517 (581)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .. ....+... ...++
T Consensus 164 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-~~~~p- 239 (345)
T 3a8x_A 164 GD--TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIP- 239 (345)
T ss_dssp TC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC-CCCCC-
T ss_pred CC--cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC-CCCCC-
Confidence 21 2345579999999999999999999999999999999999999996532111 11 11111111 11111
Q ss_pred cccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCH------HHHHHH
Q 008012 518 IADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYM------KDAATK 564 (581)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~~ 564 (581)
..++..+.++|.+||+.||++||++ +|+++|
T Consensus 240 ----------------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 240 ----------------RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp ----------------TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred ----------------CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 1234568899999999999999996 677665
No 99
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.1e-43 Score=346.89 Aligned_cols=252 Identities=26% Similarity=0.410 Sum_probs=195.7
Q ss_pred hhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchH----HHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLE----QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|.+. ++.||+|+++.... ...+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 3568999999999999999999986 89999999876532 224678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC---ceecCCCCCCeEecC--------CCcEEEe
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP---VVHCDLKPSNILLDE--------NMVAHVS 433 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~---i~H~dikp~Nill~~--------~~~~kl~ 433 (581)
||||+++++|.+++... .+++..++.++.|++.||+||| +.| |+||||||+||+++. ++.+||+
T Consensus 84 v~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 84 VMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 99999999999998643 4789999999999999999999 677 999999999999986 7789999
Q ss_pred eccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCC
Q 008012 434 DFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513 (581)
Q Consensus 434 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 513 (581)
|||.+....... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||........ ...........
T Consensus 159 Dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~ 233 (271)
T 3dtc_A 159 DFGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV-AYGVAMNKLAL 233 (271)
T ss_dssp CCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH-HHHHHTSCCCC
T ss_pred cCCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHhhhcCCCCC
Confidence 999998654322 2244689999999999888999999999999999999999999976422111 11111111111
Q ss_pred CCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHh
Q 008012 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKI 568 (581)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 568 (581)
.. +..+++.+.+++.+||+.||++|||+.|++++|+++
T Consensus 234 ~~-----------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 234 PI-----------------PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CC-----------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CC-----------------CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11 113345688999999999999999999999999864
No 100
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.2e-44 Score=358.50 Aligned_cols=268 Identities=24% Similarity=0.382 Sum_probs=217.4
Q ss_pred hhhhHHHhhcCCCcCCeecccccccEEEEEeC------CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEee
Q 008012 282 SYLDLERATDGFNECNLLGSGGFGSVYKGILS------DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILS 354 (581)
Q Consensus 282 ~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~ 354 (581)
...+++...++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|++++++++||||+++++
T Consensus 16 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 16 VPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred ChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 34456677889999999999999999999854 46889999997553 344567889999999999999999999
Q ss_pred eeecCCeeeEEEeccCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec
Q 008012 355 SCCNTNFKALVLEFMPNGSLDKWLYSHN---------YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLD 425 (581)
Q Consensus 355 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~ 425 (581)
++.+.+..++||||+++++|.+++.... ..+++..++.++.||+.||+||| ++||+||||||+||+++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVA 172 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEEC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEc
Confidence 9999999999999999999999998532 34688999999999999999999 88999999999999999
Q ss_pred CCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHH
Q 008012 426 ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLK 504 (581)
Q Consensus 426 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~ 504 (581)
.++.+||+|||++................+++.|+|||++.+..++.++||||||+++|+|++ |+.||...... ...
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~ 250 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVL 250 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HHH
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HHH
Confidence 999999999999986643332222233456889999999988899999999999999999999 89998763221 122
Q ss_pred HHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 505 NWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
..+... .... .+..++..+.+++.+||+.||++|||+.|++++|+++...
T Consensus 251 ~~~~~~---~~~~--------------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 251 RFVMEG---GLLD--------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HHHHTT---CCCC--------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHHHcC---CcCC--------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 222211 1111 0113455688999999999999999999999999887543
No 101
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.2e-44 Score=352.74 Aligned_cols=254 Identities=22% Similarity=0.330 Sum_probs=206.4
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CC-------cEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCe
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DG-------TTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNF 361 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 361 (581)
.++|++.+.||+|+||.||+|... ++ ..||+|++........+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 467899999999999999999855 33 4799999987766666789999999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc--------EEEe
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV--------AHVS 433 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~--------~kl~ 433 (581)
.++||||+++++|.+++......+++..++.++.||+.||+||| ++||+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999987766899999999999999999999 899999999999999998876 9999
Q ss_pred eccCceecCCCCCcceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 008012 434 DFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLP 512 (581)
Q Consensus 434 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 512 (581)
|||.+..... .....+++.|+|||++.+ ..++.++||||||+++|||++|..|+........ ....... .
T Consensus 164 Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-~~~~~~~--~ 234 (289)
T 4fvq_A 164 DPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR-KLQFYED--R 234 (289)
T ss_dssp CCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-HHHHHHT--T
T ss_pred cCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHH-HHHHhhc--c
Confidence 9999875422 123457889999998877 6799999999999999999996555433222111 1111111 1
Q ss_pred CCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 513 HGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
...+.. .+..+.+++.+||+.||++|||++|++++|+++....
T Consensus 235 ~~~~~~-----------------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 235 HQLPAP-----------------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp CCCCCC-----------------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred CCCCCC-----------------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 111111 1234679999999999999999999999999886543
No 102
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=362.88 Aligned_cols=264 Identities=23% Similarity=0.280 Sum_probs=212.5
Q ss_pred chhhhHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH---HHHHHHHHHHHHHHhcCCCccceEeeee
Q 008012 281 TSYLDLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSC 356 (581)
Q Consensus 281 ~~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 356 (581)
..+.+.+...++|++.+.||+|+||.||+|+.+ +|+.||+|++++... ...+.+.+|..++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566677899999999999999999999975 799999999976432 2234578899999999999999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeecc
Q 008012 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFG 436 (581)
Q Consensus 357 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg 436 (581)
.+.+..|+||||++||+|.+++.+.+..+++..++.++.||+.||+||| +.||+||||||+|||++.++.+||+|||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeech
Confidence 9999999999999999999999876666899999999999999999999 8999999999999999999999999999
Q ss_pred CceecCCCCCcceeeccccCccccCCCCCC-------CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 008012 437 ISKLLGEGDDSVIQTMTIATIGYMAPEFGS-------EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE 509 (581)
Q Consensus 437 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~ 509 (581)
+++....... .......||+.|+|||++. +..++.++|||||||++|||++|+.||...... ..+...+..
T Consensus 208 la~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~ 285 (412)
T 2vd5_A 208 SCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-ETYGKIVHY 285 (412)
T ss_dssp TCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTH
T ss_pred hheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhc
Confidence 9987644322 2223457999999999876 457899999999999999999999999763221 112222211
Q ss_pred hCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCC---CCHHHHHHH
Q 008012 510 SLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQR---LYMKDAATK 564 (581)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~evl~~ 564 (581)
.....++. ....++.++.++|.+||. +|++| |+++|+++|
T Consensus 286 ~~~~~~p~--------------~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 286 KEHLSLPL--------------VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HHHCCCC------------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred ccCcCCCc--------------cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 10001110 011345678899999999 99998 589999876
No 103
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.2e-43 Score=349.89 Aligned_cols=250 Identities=22% Similarity=0.315 Sum_probs=198.3
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH--------------------------HHHHHHHHHHHHHH
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE--------------------------QAFRSFNSECEVLR 342 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 342 (581)
.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 478999999999999999999965 789999999865431 12356889999999
Q ss_pred hcCCCccceEeeeeec--CCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCC
Q 008012 343 NVRHRNLIKILSSCCN--TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPS 420 (581)
Q Consensus 343 ~l~h~~iv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~ 420 (581)
+++||||+++++++.+ .+..++||||+++++|.+++.. ..+++..++.++.||+.||+||| +.||+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999986 5688999999999999886543 34799999999999999999999 889999999999
Q ss_pred CeEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCC---CCccccHHHHHHHHHHHHhCCCCCCccc
Q 008012 421 NILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGN---VSSKCDVYSYGILLLETFTRKKPTDEMF 497 (581)
Q Consensus 421 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~vl~el~tg~~Pf~~~~ 497 (581)
||+++.++.+||+|||++........ ......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 99999999999999999987653322 234457999999999987765 4788999999999999999999997532
Q ss_pred cccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 498 TGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
. ......+..... ..+. ...+++.+.++|.+||+.||++|||++|+++|
T Consensus 245 ~--~~~~~~~~~~~~-~~~~---------------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 I--MCLHSKIKSQAL-EFPD---------------QPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp H--HHHHHHHHHCCC-CCCS---------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred H--HHHHHHHhcccC-CCCC---------------ccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 1 111111111110 1110 01234568899999999999999999999875
No 104
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-43 Score=351.23 Aligned_cols=264 Identities=27% Similarity=0.440 Sum_probs=208.9
Q ss_pred hhcCCCcCCeecccccccEEEEEeCC-----CcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCee
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILSD-----GTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFK 362 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 362 (581)
..++|++.+.||+|+||.||+|.... +..||+|+++... ......+.+|++++++++||||+++++++.+.+..
T Consensus 42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 34677888999999999999998542 2359999997653 34456789999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 363 ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
++||||+++++|.+++......+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 122 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 9999999999999999987677899999999999999999999 8899999999999999999999999999998764
Q ss_pred CCCCc-ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcccc
Q 008012 443 EGDDS-VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIAD 520 (581)
Q Consensus 443 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (581)
..... .......++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+........
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~~~~~~~----- 271 (333)
T 1mqb_A 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAINDGFRLPT----- 271 (333)
T ss_dssp ------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCCCC-----
T ss_pred cccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHCCCcCCC-----
Confidence 33221 11223346788999999998899999999999999999999 99999764221 12222222111110
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 521 ANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
+..++..+.+++.+||+.||++||++.|++++|+++......
T Consensus 272 ------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 272 ------------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp ------------CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred ------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 113455688999999999999999999999999998875543
No 105
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.9e-43 Score=348.08 Aligned_cols=265 Identities=23% Similarity=0.392 Sum_probs=211.3
Q ss_pred HhhcCCCcCCeecccccccEEEEEeCC----CcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeee-cCCe
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILSD----GTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCC-NTNF 361 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 361 (581)
....+|++.+.||+|+||.||+|...+ +..||+|.+... .....+.+.+|+.++++++||||+++++++. ..+.
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 22 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GGGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ccceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 345678899999999999999998542 235899998754 3455678999999999999999999999864 5567
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceec
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
.++||||+++++|.+++......+++..++.++.|++.||+||| ++||+||||||+||+++.++.+||+|||++...
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred eEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccc
Confidence 89999999999999999887777899999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCC--cceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 442 GEGDD--SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 442 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
..... ........+++.|+|||.+.+..++.++||||||+++|+|++ |.+||.... . ......+........+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-- 254 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-T-FDITVYLLQGRRLLQP-- 254 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-T-TTHHHHHHTTCCCCCC--
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-H-HHHHHHHhcCCCCCCC--
Confidence 43221 112334467889999999998899999999999999999999 556665432 2 2222222222211111
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 519 ADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
..++..+.+++.+||+.||++|||++|+++.|+++.+.+..
T Consensus 255 ---------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~~ 295 (298)
T 3f66_A 255 ---------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 295 (298)
T ss_dssp ---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSCC
T ss_pred ---------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 12345688999999999999999999999999999887654
No 106
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.4e-43 Score=375.26 Aligned_cols=261 Identities=24% Similarity=0.372 Sum_probs=216.0
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
.++...++|++.+.||+|+||.||+|.++ ++..||||+++.... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 292 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 292 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEE
Confidence 34445677899999999999999999976 588999999976532 2467899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 364 LVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
+||||+++|+|.+++... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||++....
T Consensus 293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 999999999999999864 345789999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
... ........++..|+|||++.+..++.++|||||||++|||+| |..||..... ......+.......
T Consensus 370 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~~~------- 439 (495)
T 1opk_A 370 GDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKDYRME------- 439 (495)
T ss_dssp TCC-EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCCC-------
T ss_pred CCc-eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCC-------
Confidence 322 112233446788999999998899999999999999999999 9999976432 22333333222111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIR 569 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 569 (581)
.+..+++.+.++|.+||+.||++|||+.++++.|+.+.
T Consensus 440 ----------~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 440 ----------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp ----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ----------CCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 11234567889999999999999999999999998764
No 107
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.3e-43 Score=353.90 Aligned_cols=246 Identities=22% Similarity=0.272 Sum_probs=206.8
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH---HHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 468999999999999999999965 799999999976532 2345788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||+++|+|.+++.+.+. +++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 999999999999987554 789999999999999999999 899999999999999999999999999999876432
Q ss_pred CcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchh
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR 525 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (581)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... ..++
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~-~~~p--------- 258 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP--IQIYEKIVSGK-VRFP--------- 258 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-CCCC---------
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH--HHHHHHHHcCC-CCCC---------
Confidence 2345689999999999999999999999999999999999999976321 11222122111 1111
Q ss_pred hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCC-----HHHHHHH
Q 008012 526 EENFFSARMDCLLSIFHLALDCCAELPDQRLY-----MKDAATK 564 (581)
Q Consensus 526 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 564 (581)
..++..+.++|.+||+.||++||+ ++|+++|
T Consensus 259 --------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 259 --------SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp --------TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred --------CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 123456889999999999999998 8888876
No 108
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.8e-43 Score=363.59 Aligned_cols=261 Identities=19% Similarity=0.261 Sum_probs=211.2
Q ss_pred hhhhHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHH---HHHHHHHHHHHHHhcCCCccceEeeeee
Q 008012 282 SYLDLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQ---AFRSFNSECEVLRNVRHRNLIKILSSCC 357 (581)
Q Consensus 282 ~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 357 (581)
...+++...++|++.+.||+|+||.||+|+.+ +++.||+|+++..... ..+.+.+|+.+++.++||||+++++++.
T Consensus 60 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 139 (410)
T 3v8s_A 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 139 (410)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred HHHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 34566677889999999999999999999966 7899999999764321 1234778999999999999999999999
Q ss_pred cCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccC
Q 008012 358 NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGI 437 (581)
Q Consensus 358 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~ 437 (581)
+.+..|+||||++||+|.+++.... +++..+..++.||+.||+||| ++||+||||||+|||++.++.+||+|||+
T Consensus 140 ~~~~~~lV~E~~~gg~L~~~l~~~~--~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 140 DDRYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp CSSEEEEEECCCTTEEHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ECCEEEEEEeCCCCCcHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccce
Confidence 9999999999999999999998653 688999999999999999999 89999999999999999999999999999
Q ss_pred ceecCCCCCcceeeccccCccccCCCCCCCCC----CCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCC
Q 008012 438 SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGN----VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH 513 (581)
Q Consensus 438 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~ 513 (581)
++...... ........||+.|+|||++.+.. ++.++|||||||++|||++|++||...... .....+.......
T Consensus 215 a~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~~~~~ 292 (410)
T 3v8s_A 215 CMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMNHKNSL 292 (410)
T ss_dssp CEECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHHC
T ss_pred eEeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-hHHHHHHhccccc
Confidence 98764332 22234567999999999887655 789999999999999999999999763211 1122222111111
Q ss_pred CCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCC--CCCHHHHHHH
Q 008012 514 GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQ--RLYMKDAATK 564 (581)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~ 564 (581)
..+. ...++..+.+||.+||..+|++ ||+++||++|
T Consensus 293 ~~p~---------------~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 293 TFPD---------------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCT---------------TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cCCC---------------cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 1111 1123456889999999999998 9999999987
No 109
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.8e-43 Score=342.29 Aligned_cols=253 Identities=23% Similarity=0.362 Sum_probs=208.5
Q ss_pred hhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecC--CeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNT--NFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~~~l 364 (581)
..++|++.+.||+|+||.||+|.+. ++.||+|+++... ....+.+.+|+.++++++||||+++++++.+. +..++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 3567999999999999999999986 8999999997653 44557799999999999999999999999887 78899
Q ss_pred EEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecCCCcEEEeeccCceec
Q 008012 365 VLEFMPNGSLDKWLYSHNY-FQDIPDRLNIMIDVALALEYLHHGHSTP--VVHCDLKPSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dikp~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
||||+++|+|.+++..... .+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.++|+|||++...
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 9999999999999987653 4799999999999999999999 888 999999999999999999999999987643
Q ss_pred CCCCCcceeeccccCccccCCCCCCCCCCCc---cccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 442 GEGDDSVIQTMTIATIGYMAPEFGSEGNVSS---KCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 442 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
.. ....+|+.|+|||++.+..++. ++||||||+++|||++|+.||....... ..............+
T Consensus 164 ~~-------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~-- 233 (271)
T 3kmu_A 164 QS-------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME-IGMKVALEGLRPTIP-- 233 (271)
T ss_dssp SC-------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-HHHHHHHSCCCCCCC--
T ss_pred cc-------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-HHHHHHhcCCCCCCC--
Confidence 22 2346799999999988765554 7999999999999999999997642221 111111111111111
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHH
Q 008012 519 ADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570 (581)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 570 (581)
..+++.+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 234 ---------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 234 ---------------PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ---------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1234568899999999999999999999999998864
No 110
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=5.9e-44 Score=374.56 Aligned_cols=264 Identities=23% Similarity=0.405 Sum_probs=215.7
Q ss_pred hhHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 284 LDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 284 ~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
..++...++|++.+.||+|+||.||+|.++++..||||+++.... ..+.+.+|++++++++||||+++++++. .+..+
T Consensus 181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~ 258 (454)
T 1qcf_A 181 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY 258 (454)
T ss_dssp TCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred cceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence 344566788999999999999999999998889999999986532 3467899999999999999999999986 56789
Q ss_pred EEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 364 LVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
+||||+++|+|.+++.... ..+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++...
T Consensus 259 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp EEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 9999999999999998542 34788999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
... ........++..|+|||++.+..++.++|||||||++|||+| |+.||...... .....+.......
T Consensus 336 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~~~------- 405 (454)
T 1qcf_A 336 DNE-YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYRMP------- 405 (454)
T ss_dssp CHH-HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHTCCCC-------
T ss_pred CCc-eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCC-------
Confidence 221 111223346788999999988899999999999999999999 99999764221 2222222221111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
.+..+++.+.++|.+||+.||++|||+++|++.|+++....
T Consensus 406 ----------~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 406 ----------RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp ----------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred ----------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 11235667899999999999999999999999999886543
No 111
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=4.1e-43 Score=356.85 Aligned_cols=255 Identities=21% Similarity=0.256 Sum_probs=198.0
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEE
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
...++|++.+.||+|+||.||+|+.. +++.||+|++..... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 34578999999999999999999976 899999999976432 1246789999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc--EEEeeccCceecCCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV--AHVSDFGISKLLGEG 444 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~--~kl~Dfg~a~~~~~~ 444 (581)
||+++|+|.+++...+. +++..++.++.|++.||+||| ++||+||||||+||+++.++. +||+|||+++.....
T Consensus 96 e~~~~~~L~~~l~~~~~-~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 96 EYASGGELYERICNAGR-FSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp ECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred EeCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 99999999999976543 789999999999999999999 899999999999999987765 999999999753222
Q ss_pred CCcceeeccccCccccCCCCCCCCCCCcc-ccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNVSSK-CDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
. ......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||...... ......+..........
T Consensus 172 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~~~~~~~~~~~~~------ 241 (361)
T 3uc3_A 172 S---QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP-RDYRKTIQRILSVKYSI------ 241 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C-CCHHHHHHHHHTTCCCC------
T ss_pred C---CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH-HHHHHHHHHHhcCCCCC------
Confidence 1 2234569999999999888777655 89999999999999999999864322 23333333322211110
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+....+++.+.+||.+||..||++|||+.|+++|
T Consensus 242 -------~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 242 -------PDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -------CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred -------CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 0001234567899999999999999999999987
No 112
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.6e-43 Score=349.66 Aligned_cols=266 Identities=23% Similarity=0.272 Sum_probs=212.6
Q ss_pred HhhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeee----cCCee
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC----NTNFK 362 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~~ 362 (581)
...++|++.+.||+|+||.||+|.. .+++.||+|++........+.+.+|++++++++||||+++++++. .....
T Consensus 26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 4457899999999999999999996 479999999997776667788999999999999999999999986 34478
Q ss_pred eEEEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCce
Q 008012 363 ALVLEFMPNGSLDKWLYS---HNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK 439 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~ 439 (581)
++||||+++++|.+++.. .+..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 999999999999999985 3556899999999999999999999 8899999999999999999999999999987
Q ss_pred ecCCCCCcc-------eeeccccCccccCCCCCCCCC---CCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 008012 440 LLGEGDDSV-------IQTMTIATIGYMAPEFGSEGN---VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE 509 (581)
Q Consensus 440 ~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~ 509 (581)
......... ......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||.............+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 262 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN 262 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc
Confidence 653211100 012335799999999887654 6889999999999999999999997543333333332222
Q ss_pred hCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 510 SLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
... .+. ...++..+.+++.+||+.||++|||++|++++|+++....+
T Consensus 263 ~~~--~~~---------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~ 309 (317)
T 2buj_A 263 QLS--IPQ---------------SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAP 309 (317)
T ss_dssp C----CCC---------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCC
T ss_pred cCC--CCc---------------cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCC
Confidence 111 000 11234568899999999999999999999999998864433
No 113
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-43 Score=353.44 Aligned_cols=275 Identities=26% Similarity=0.424 Sum_probs=216.0
Q ss_pred hcCCCcCCeecccccccEEEEEe-----CCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCC--ee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGIL-----SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN--FK 362 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~ 362 (581)
.++|++.+.||+|+||.||+|++ .+++.||+|++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 46788999999999999999983 368999999998776666778999999999999999999999986644 78
Q ss_pred eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 363 ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
++||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999999987767899999999999999999999 8999999999999999999999999999998875
Q ss_pred CCCCcc-eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 443 EGDDSV-IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 443 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
...... ......++..|+|||.+.+..++.++||||||+++|||+||..||...... +...............
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~------~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE------FMRMIGNDKQGQMIVF 270 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH------HHHHHCTTCCTHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH------HHHhhccccchhhhHH
Confidence 443221 122345677899999998888999999999999999999999997642110 0000000000000000
Q ss_pred cc---hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 522 NL---LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 522 ~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
.+ .......+.+..++..+.++|.+||+.||++|||+.|+++.|+++++++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 00 00000001122456678999999999999999999999999999998764
No 114
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.8e-43 Score=352.14 Aligned_cols=267 Identities=23% Similarity=0.314 Sum_probs=192.3
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
.++|++.+.||+|+||.||+|..+ +|+.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 468999999999999999999965 78999999987553 2223567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 368 FMPNGSLDKWLYSHN-----YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
|++ ++|.+++.... ..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999987532 34789999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCcceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCC--C-CCcc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH--G-LPKI 518 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~--~-~~~~ 518 (581)
.... ......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+.......... . .+..
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCTTTCGGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhHhhhh
Confidence 3322 1234568999999998876 46899999999999999999999999764322 1222222111100 0 0000
Q ss_pred cc-------------ccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 519 AD-------------ANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 519 ~~-------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.. ..+.. .........++..+.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQ-VLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHH-HHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhhcccccccccchhHHH-hhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 00000 00000111345678999999999999999999999986
No 115
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.4e-43 Score=350.30 Aligned_cols=263 Identities=23% Similarity=0.395 Sum_probs=209.5
Q ss_pred hcCCCcCCeecccccccEEEEEe-----CCCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecC--Ce
Q 008012 290 TDGFNECNLLGSGGFGSVYKGIL-----SDGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNT--NF 361 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--~~ 361 (581)
.+.|++.+.||+|+||.||+|.+ .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+. +.
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35588899999999999999983 368999999997553 22346788999999999999999999999876 66
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceec
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
.++||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccc
Confidence 89999999999999999876666899999999999999999999 899999999999999999999999999999887
Q ss_pred CCCCCc-ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcccc----------ccccHHHHHHhh
Q 008012 442 GEGDDS-VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFT----------GEMNLKNWVKES 510 (581)
Q Consensus 442 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~----------~~~~~~~~~~~~ 510 (581)
...... .......++..|+|||++.+..++.++||||||+++|+|++|..|+..... ............
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL 256 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence 544322 223345678889999999888999999999999999999999998654211 011111111111
Q ss_pred CCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhH
Q 008012 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIR 569 (581)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 569 (581)
.... ....+..+++.+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 257 ~~~~--------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 257 KEGK--------------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HTTC--------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hccC--------------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 0000 00111245567899999999999999999999999999874
No 116
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.5e-43 Score=352.42 Aligned_cols=264 Identities=22% Similarity=0.353 Sum_probs=210.7
Q ss_pred HhhcCCCcCCeecccccccEEEEEe------CCCcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCC
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGIL------SDGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN 360 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 360 (581)
...++|++.+.||+|+||.||+|.+ .+++.||+|++... .......+.+|+.++++++||||+++++++.+.+
T Consensus 27 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp CCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 3457899999999999999999983 25778999999654 3445567889999999999999999999999999
Q ss_pred eeeEEEeccCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCcEE
Q 008012 361 FKALVLEFMPNGSLDKWLYSHN------YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE---NMVAH 431 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~---~~~~k 431 (581)
..++||||+++++|.+++.... ..+++..++.++.|++.||.||| +.||+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEE
Confidence 9999999999999999998654 34788999999999999999999 899999999999999984 45699
Q ss_pred EeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhh
Q 008012 432 VSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKES 510 (581)
Q Consensus 432 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~ 510 (581)
|+|||++................+++.|+|||++.+..++.++||||||+++|+|+| |+.||..... ......+...
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~ 261 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSG 261 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHTT
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHHHHHhcC
Confidence 999999986543333333345567899999999988899999999999999999998 9999876321 1222222222
Q ss_pred CCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
.....+ ..++..+.+++.+||+.||++|||+.|++++|+.+.....
T Consensus 262 ~~~~~~-----------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 262 GRMDPP-----------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp CCCCCC-----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred CCCCCC-----------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 111111 1234568899999999999999999999999999876554
No 117
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.5e-43 Score=342.95 Aligned_cols=254 Identities=22% Similarity=0.353 Sum_probs=209.4
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467899999999999999999975 78999999987543 3345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCc
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 447 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 447 (581)
|+++++|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+.........
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 999999999987654 3789999999999999999999 899999999999999999999999999999876433322
Q ss_pred ceeeccccCccccCCCCCCCCCC-CccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhh
Q 008012 448 VIQTMTIATIGYMAPEFGSEGNV-SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526 (581)
Q Consensus 448 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (581)
.......|++.|+|||++.+..+ +.++||||||+++|+|++|+.||............+...... .
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~----------- 228 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--L----------- 228 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--S-----------
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--c-----------
Confidence 22345578999999999887665 779999999999999999999998754333333332221100 0
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 527 ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 527 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.....++..+.+++.+||+.||++|||++|++++
T Consensus 229 ----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 229 ----NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp ----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ----CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0112345568899999999999999999999875
No 118
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=1.7e-42 Score=340.99 Aligned_cols=253 Identities=22% Similarity=0.337 Sum_probs=208.5
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 4578999999999999999999965 78999999996653 44557788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---EEEeeccCceecC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV---AHVSDFGISKLLG 442 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~---~kl~Dfg~a~~~~ 442 (581)
|||+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++. +||+|||.+....
T Consensus 84 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 84 FDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 99999999999888664 3789999999999999999999 899999999999999986655 9999999998764
Q ss_pred CCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
.... .....|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+....... +.
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~-~~----- 228 (284)
T 3kk8_A 160 DSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIKAGAYDY-PS----- 228 (284)
T ss_dssp SSCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCCC-CT-----
T ss_pred cCcc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--hHHHHHHHhccccC-Cc-----
Confidence 3322 2345789999999999999999999999999999999999999976322 11222222211111 00
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+....+++.+.+++.+||+.||++|||+.|++++
T Consensus 229 --------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 229 --------PEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp --------TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred --------hhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0011334568899999999999999999999986
No 119
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.4e-43 Score=346.08 Aligned_cols=266 Identities=23% Similarity=0.386 Sum_probs=214.6
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
+++...++|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+ +..++
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence 34555678999999999999999999988888999999876532 23578899999999999999999999864 56899
Q ss_pred EEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 365 VLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
||||+++++|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||++++++.+||+|||.+.....
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 999999999999997542 24789999999999999999999 89999999999999999999999999999987754
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
... .......++..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+........
T Consensus 162 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~~------- 231 (279)
T 1qpc_A 162 NEY-TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMVR------- 231 (279)
T ss_dssp SCE-ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCCCC-------
T ss_pred ccc-ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhcccCCCC-------
Confidence 321 12233456788999999988889999999999999999999 99999763221 12222222111111
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHhh
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLED 575 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 575 (581)
+..++..+.+++.+||+.||++|||++++++.|+++.......
T Consensus 232 ----------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 274 (279)
T 1qpc_A 232 ----------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQ 274 (279)
T ss_dssp ----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC---
T ss_pred ----------cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCC
Confidence 1134457889999999999999999999999999998765543
No 120
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-43 Score=359.95 Aligned_cols=263 Identities=23% Similarity=0.385 Sum_probs=203.4
Q ss_pred cCCCcCCeecccccccEEEEEeC--C--CcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeec-CCeeeE
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS--D--GTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-TNFKAL 364 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~--~--~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~l 364 (581)
..|++.+.||+|+||.||+|.+. + +..||+|.++.. .....+.+.+|+.++++++||||+++++++.. .+..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 34677789999999999999853 2 246899998654 34556789999999999999999999998754 567899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
||||+++|+|.+++......+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.....
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999999987777899999999999999999999 899999999999999999999999999999866432
Q ss_pred CCc--ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 445 DDS--VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 445 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
... .......+++.|+|||++.+..++.++|||||||++|||+| |.+||..... ......+........
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~--~~~~~~~~~~~~~~~------ 317 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLLQGRRLLQ------ 317 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS--SCHHHHHHTTCCCCC------
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH--HHHHHHHHcCCCCCC------
Confidence 211 12233457789999999999999999999999999999999 6777765322 222222222211111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHhh
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLED 575 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 575 (581)
+..++..+.+++.+||+.||++|||++|++++|+++...+...
T Consensus 318 -----------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 318 -----------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp -----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred -----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 1134557889999999999999999999999999998877644
No 121
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-43 Score=350.40 Aligned_cols=246 Identities=22% Similarity=0.219 Sum_probs=198.2
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeeeEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 365 (581)
.++|++.++||+|+||+||+|... +++.||||++... ..........|+..+.++ +||||+++++++.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 467999999999999999999976 7999999998653 233334555666666665 899999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||+ +++|.+++...+..+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 9999 67999999887777899999999999999999999 8899999999999999999999999999998764322
Q ss_pred CcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchh
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR 525 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (581)
......||+.|+|||++.+ .++.++|||||||++|||++|..|+... ..... ......+.
T Consensus 212 ---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~----~~~~~~~~-------- 271 (311)
T 3p1a_A 212 ---AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQ----LRQGYLPP-------- 271 (311)
T ss_dssp ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHH----HTTTCCCH--------
T ss_pred ---CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHH----HhccCCCc--------
Confidence 2334568999999998876 7999999999999999999997766432 11111 11111110
Q ss_pred hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 526 EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 526 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.....+++.+.+++.+||+.||++|||++|++++
T Consensus 272 -----~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 272 -----EFTAGLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp -----HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -----ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 1122456678999999999999999999999875
No 122
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=6.2e-44 Score=356.01 Aligned_cols=260 Identities=21% Similarity=0.348 Sum_probs=200.0
Q ss_pred hhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccc---hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCe---
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNF--- 361 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~--- 361 (581)
..++|++.+.||+|+||.||+|.+ .+++.||+|+++.. .......+.+|++++++++||||+++++++...+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred ecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 467899999999999999999996 47899999999765 34455678999999999999999999999876543
Q ss_pred -eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 362 -KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 362 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
.++||||+++++|.+++...+. +++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++..
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred ccEEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 4999999999999999986553 789999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCc-ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccc
Q 008012 441 LGEGDDS-VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIA 519 (581)
Q Consensus 441 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (581)
....... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||........ ....... ...+
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~---~~~~--- 238 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHVRE---DPIP--- 238 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHC---CCCC---
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhcC---CCCC---
Confidence 6543222 223345689999999999999999999999999999999999999976422111 1111111 0000
Q ss_pred cccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHH-HHHHh
Q 008012 520 DANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAAT-KLKKI 568 (581)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~-~L~~~ 568 (581)
.......++..+.+++.+||+.||++||++.++++ .+.+.
T Consensus 239 ---------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 239 ---------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp ---------HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred ---------cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 01111235667889999999999999997776654 44444
No 123
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1e-42 Score=349.41 Aligned_cols=250 Identities=21% Similarity=0.292 Sum_probs=196.8
Q ss_pred hhcCCCcCCeecccccccEEEEEe----CCCcEEEEEEeccch----HHHHHHHHHHHHHHHhcCCCccceEeeeeecCC
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL----EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN 360 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 360 (581)
..++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|++++++++||||+++++++.+.+
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 94 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG 94 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC
Confidence 357899999999999999999996 478999999997652 233456788999999999999999999999999
Q ss_pred eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..++||||+++++|.+++...+. +++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++..
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 95 KLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp CEEEEEECCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEEeCCCCCcHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999999999986543 688999999999999999999 88999999999999999999999999999975
Q ss_pred cCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccc
Q 008012 441 LGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIAD 520 (581)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (581)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+.... ..++
T Consensus 171 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~-~~~p---- 241 (327)
T 3a62_A 171 SIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--KTIDKILKCK-LNLP---- 241 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHTC-CCCC----
T ss_pred cccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCC-CCCC----
Confidence 43222 1233457899999999999989999999999999999999999999763221 1111111111 1111
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 008012 521 ANLLREENFFSARMDCLLSIFHLALDCCAELPDQRL-----YMKDAATK 564 (581)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 564 (581)
..++..+.++|.+||..||++|| ++.|+++|
T Consensus 242 -------------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 242 -------------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp -------------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred -------------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 12345688999999999999999 78888876
No 124
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.9e-43 Score=342.50 Aligned_cols=252 Identities=21% Similarity=0.297 Sum_probs=208.1
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
..++|++.+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 4567999999999999999999965 678999999977654455788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCcEEEeeccCceecCCC
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~~~ 444 (581)
|+++++|.+++..... +++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~~~~~~~-~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 87 LCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred ccCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 9999999999987544 789999999999999999999 8999999999999999 78899999999999876543
Q ss_pred CCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
. ......+++.|+|||++.+. ++.++||||||+++|+|++|+.||...... .....+...... .+
T Consensus 163 ~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~-~~-------- 227 (277)
T 3f3z_A 163 K---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS--EVMLKIREGTFT-FP-------- 227 (277)
T ss_dssp S---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCC-CC--------
T ss_pred c---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCCC-CC--------
Confidence 2 22345689999999988764 899999999999999999999999764221 111111111110 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
......+++.+.+++.+||+.||++|||+.|++++
T Consensus 228 -----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 228 -----EKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp -----HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -----chhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01112345678899999999999999999999986
No 125
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1e-42 Score=349.00 Aligned_cols=249 Identities=22% Similarity=0.298 Sum_probs=184.0
Q ss_pred CCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcC-CCccceEeeeeecCCeeeEEEeccCCCC
Q 008012 296 CNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILSSCCNTNFKALVLEFMPNGS 373 (581)
Q Consensus 296 ~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 373 (581)
.+.||+|+||.||+|..+ +++.||+|++..... ..+.+|+.+++.+. ||||+++++++.+.+..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRME---ANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGH---HHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhhh---hhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 378999999999999975 789999999976543 45678999999996 9999999999999999999999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---cEEEeeccCceecCCCCCccee
Q 008012 374 LDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM---VAHVSDFGISKLLGEGDDSVIQ 450 (581)
Q Consensus 374 L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~ 450 (581)
|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++ .+||+|||++........ ..
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~ 166 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PL 166 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--cc
Confidence 999998764 4799999999999999999999 89999999999999998665 899999999987643322 23
Q ss_pred eccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccc--cccHHHHHHhhCCCCCCccccccchhhhh
Q 008012 451 TMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTG--EMNLKNWVKESLPHGLPKIADANLLREEN 528 (581)
Q Consensus 451 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (581)
....+|+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....+........... .
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~-~---------- 235 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS-F---------- 235 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC-C----------
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC-C----------
Confidence 3456899999999999999999999999999999999999999764321 11222222222221111 0
Q ss_pred hhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 529 FFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 529 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.......+++++.++|.+||+.||++|||++|+++|
T Consensus 236 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 236 EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 011223456778999999999999999999999865
No 126
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-42 Score=362.57 Aligned_cols=248 Identities=26% Similarity=0.379 Sum_probs=207.3
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH---HHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
.++|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 478999999999999999999976 899999999976532 2346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||+++|+|.+++.+.+ .+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 95 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999999998654 4799999999999999999999 8999999999999999999999999999998765432
Q ss_pred CcceeeccccCccccCCCCCCCCCC-CccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNV-SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..... ......+..... ..+
T Consensus 171 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--~~~~~~i~~~~~-~~p-------- 236 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--PTLFKKICDGIF-YTP-------- 236 (476)
T ss_dssp ---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--HHHHHHHHTTCC-CCC--------
T ss_pred ---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--HHHHHHHhcCCc-CCC--------
Confidence 2234579999999999888765 6899999999999999999999976321 112222221111 011
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..+++.+.++|.+||..||++|||++|+++|
T Consensus 237 ---------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 237 ---------QYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp ---------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred ---------ccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1234567899999999999999999999986
No 127
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-42 Score=343.42 Aligned_cols=263 Identities=24% Similarity=0.367 Sum_probs=212.3
Q ss_pred CCCcCCeecccccccEEEEEeC-CC---cEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCee-eEE
Q 008012 292 GFNECNLLGSGGFGSVYKGILS-DG---TTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFK-ALV 365 (581)
Q Consensus 292 ~y~~~~~lg~G~~~~v~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~-~lv 365 (581)
.|...+.||+|+||.||+|.+. ++ ..||+|++.... ....+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4566789999999999999853 22 379999987543 45567889999999999999999999999876655 999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||+.+++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999987777899999999999999999999 8899999999999999999999999999998654322
Q ss_pred C--cceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 446 D--SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 446 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
. ........+++.|+|||.+.+..++.++||||||+++|+|++|..|+.... ........+........+
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~------- 250 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRRLPQP------- 250 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTTCCCCCC-------
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcCCCCCCC-------
Confidence 1 112234467889999999999999999999999999999999665544322 222333333332221111
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHhh
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLED 575 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 575 (581)
..+++.+.+++.+||+.||++|||++++++.|+++.+.+...
T Consensus 251 ----------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 251 ----------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp ----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred ----------ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 123456889999999999999999999999999998877544
No 128
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=6.4e-43 Score=353.33 Aligned_cols=250 Identities=22% Similarity=0.259 Sum_probs=205.6
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeee
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 363 (581)
..++|++.+.||+|+||.||+|+.+ +++.||+|+++... ....+.+..|..++..+ +||+|+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4578999999999999999999976 58899999997653 22345678899999988 8999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||++||+|.+++...+. +++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 99999999999999987544 789999999999999999999 89999999999999999999999999999986432
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+..... .++
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~~~-~~p------- 241 (353)
T 2i0e_A 174 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEHNV-AYP------- 241 (353)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-CCC-------
T ss_pred CC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--HHHHHHHHhCCC-CCC-------
Confidence 22 123455799999999999999999999999999999999999999976321 112222221111 111
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCC-----HHHHHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLY-----MKDAATK 564 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 564 (581)
..++.++.++|.+||..||++||+ ++|+++|
T Consensus 242 ----------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 242 ----------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp ----------TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred ----------CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 123456889999999999999995 5777765
No 129
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.3e-43 Score=356.18 Aligned_cols=261 Identities=23% Similarity=0.287 Sum_probs=205.5
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-----HHHHHHHHHHHHHHHhcCCCccceEeeeeec
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-----EQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 358 (581)
++....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 45667788999999999999999999965 78899999987542 3445688999999999999999999999999
Q ss_pred CCeeeEEEeccCCCCHHHHHhhC---------------------------------------CCCCCHHHHHHHHHHHHH
Q 008012 359 TNFKALVLEFMPNGSLDKWLYSH---------------------------------------NYFQDIPDRLNIMIDVAL 399 (581)
Q Consensus 359 ~~~~~lv~e~~~~~~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~ 399 (581)
.+..++||||+++|+|.+++... ...+++..++.++.||+.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 111256778899999999
Q ss_pred HHHHHhcCCCCCceecCCCCCCeEecCCC--cEEEeeccCceecCCCCC--cceeeccccCccccCCCCCCC--CCCCcc
Q 008012 400 ALEYLHHGHSTPVVHCDLKPSNILLDENM--VAHVSDFGISKLLGEGDD--SVIQTMTIATIGYMAPEFGSE--GNVSSK 473 (581)
Q Consensus 400 ~L~~LH~~~~~~i~H~dikp~Nill~~~~--~~kl~Dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~--~~~~~~ 473 (581)
||+||| +.||+||||||+||+++.++ .+||+|||++..+..... ........|++.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999 88999999999999998766 899999999987643221 122345579999999998865 678999
Q ss_pred ccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCC
Q 008012 474 CDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPD 553 (581)
Q Consensus 474 ~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 553 (581)
+|||||||++|||++|+.||...... .............. . +....+++.+.++|.+||..||+
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~-----~----------~~~~~~~~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDA-DTISQVLNKKLCFE-----N----------PNYNVLSPLARDLLSNLLNRNVD 320 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCTT-----S----------GGGGGSCHHHHHHHHHHSCSCTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHHhcccccC-----C----------cccccCCHHHHHHHHHHcCCChh
Confidence 99999999999999999999764222 11222222111100 0 11123456788999999999999
Q ss_pred CCCCHHHHHHH
Q 008012 554 QRLYMKDAATK 564 (581)
Q Consensus 554 ~Rps~~evl~~ 564 (581)
+|||+.|++++
T Consensus 321 ~Rps~~~~l~h 331 (345)
T 3hko_A 321 ERFDAMRALQH 331 (345)
T ss_dssp TSCCHHHHHHS
T ss_pred HCCCHHHHhcC
Confidence 99999999986
No 130
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=357.84 Aligned_cols=276 Identities=24% Similarity=0.327 Sum_probs=202.8
Q ss_pred HhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeec-----CCee
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-----TNFK 362 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~ 362 (581)
...++|++.+.||+|+||.||+|+. +++.||||++........ ....|+..+..++||||+++++.+.. ....
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~-~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNF-INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHH-HHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhH-HHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 3457899999999999999999987 489999999976543321 12234444455799999999985532 3367
Q ss_pred eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CceecCCCCCCeEecCCCcEEEe
Q 008012 363 ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST---------PVVHCDLKPSNILLDENMVAHVS 433 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~---------~i~H~dikp~Nill~~~~~~kl~ 433 (581)
++||||+++|+|.+++..... ++..++.++.||+.||+||| +. ||+||||||+||+++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~~--~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCCB--CHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhccc--chhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 899999999999999987654 88899999999999999999 77 99999999999999999999999
Q ss_pred eccCceecCCCCC------cceeeccccCccccCCCCCCC-------CCCCccccHHHHHHHHHHHHhCCCCCCcccccc
Q 008012 434 DFGISKLLGEGDD------SVIQTMTIATIGYMAPEFGSE-------GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE 500 (581)
Q Consensus 434 Dfg~a~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~ 500 (581)
|||++..+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987653221 112234469999999998876 456778999999999999999977764422211
Q ss_pred cc-------------HHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHH
Q 008012 501 MN-------------LKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKK 567 (581)
Q Consensus 501 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 567 (581)
.. ...+............... .......+++.+.++|.+||+.||++|||++|+++.|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE-------AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT-------TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCc-------ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 10 0000000000000000000 011123466789999999999999999999999999999
Q ss_pred hHHHHHhhcc
Q 008012 568 IRDKFLEDAN 577 (581)
Q Consensus 568 ~~~~~~~~~~ 577 (581)
+...+....+
T Consensus 316 ll~~~~~~~~ 325 (336)
T 3g2f_A 316 LMMIWERNKS 325 (336)
T ss_dssp HHHCCCC---
T ss_pred HHHHHHhccc
Confidence 9988776554
No 131
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5e-42 Score=347.08 Aligned_cols=277 Identities=22% Similarity=0.350 Sum_probs=219.8
Q ss_pred hhhhHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHh--cCCCccceEeeeeecC
Q 008012 282 SYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRN--VRHRNLIKILSSCCNT 359 (581)
Q Consensus 282 ~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~iv~~~~~~~~~ 359 (581)
+........++|++.+.||+|+||.||+|... ++.||+|++..... ..+.+|.++++. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGGGH---HHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCchhH---HHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 34445566789999999999999999999985 89999999976543 456788999888 6899999999999877
Q ss_pred C----eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCceecCCCCCCeEecCCCcE
Q 008012 360 N----FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG-----HSTPVVHCDLKPSNILLDENMVA 430 (581)
Q Consensus 360 ~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~i~H~dikp~Nill~~~~~~ 430 (581)
+ ..++||||+++|+|.+++.+.. +++..++.++.|++.||+|||.. ++.+|+||||||+||+++.++.+
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred CCccceeEEEEeecCCCcHHHHHhccC--ccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 5 7899999999999999998753 68999999999999999999932 14789999999999999999999
Q ss_pred EEeeccCceecCCCCCcc--eeeccccCccccCCCCCCCC------CCCccccHHHHHHHHHHHHhC----------CCC
Q 008012 431 HVSDFGISKLLGEGDDSV--IQTMTIATIGYMAPEFGSEG------NVSSKCDVYSYGILLLETFTR----------KKP 492 (581)
Q Consensus 431 kl~Dfg~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~vl~el~tg----------~~P 492 (581)
||+|||++.......... ......|++.|+|||++.+. .++.++|||||||++|||+|| ..|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 999999998765433221 22345789999999988765 334689999999999999999 788
Q ss_pred CCccccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 493 TDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 493 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
|............+................ ....+++..+.+++.+||+.||++|||+.|++++|+++.++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNR--------WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTSCCCCCCCGG--------GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccccCcCcccHHHHHHHHHHHHhCCCCccc--------ccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 877554444444444433222211111111 112356778999999999999999999999999999997653
No 132
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=2e-43 Score=354.25 Aligned_cols=266 Identities=20% Similarity=0.288 Sum_probs=202.1
Q ss_pred cCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHH-HHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEec
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQ-AFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEF 368 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 368 (581)
++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57999999999999999999976 7899999999765432 122456799999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCcc
Q 008012 369 MPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSV 448 (581)
Q Consensus 369 ~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 448 (581)
++ ++|.+++...+..+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++....... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--c
Confidence 97 5999999987777899999999999999999999 8999999999999999999999999999998654322 2
Q ss_pred eeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC----CCccccccc
Q 008012 449 IQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG----LPKIADANL 523 (581)
Q Consensus 449 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 523 (581)
......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...... .....+....... ++.......
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHhchhhhcchh
Confidence 2234568999999998776 57899999999999999999999999764222 2222222222111 111111100
Q ss_pred hh--------hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 524 LR--------EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 524 ~~--------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.. ..........++..+.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00 000112223456778899999999999999999999985
No 133
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-42 Score=344.81 Aligned_cols=269 Identities=23% Similarity=0.278 Sum_probs=202.0
Q ss_pred HhhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchH-----HHHHHHHHHHHHHHhc---CCCccceEeeeeec
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLE-----QAFRSFNSECEVLRNV---RHRNLIKILSSCCN 358 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l---~h~~iv~~~~~~~~ 358 (581)
...++|++.+.||+|+||.||+|.. .+++.||+|++..... .....+.+|+++++++ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467999999999999999999996 4799999999874321 1123455677777666 59999999999977
Q ss_pred CC-----eeeEEEeccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEE
Q 008012 359 TN-----FKALVLEFMPNGSLDKWLYSHNY-FQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHV 432 (581)
Q Consensus 359 ~~-----~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl 432 (581)
.. ..++||||++ ++|.+++..... .+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEE
Confidence 54 5799999997 599999986643 3799999999999999999999 899999999999999999999999
Q ss_pred eeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 008012 433 SDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLP 512 (581)
Q Consensus 433 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 512 (581)
+|||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|++||...... ............
T Consensus 162 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~ 237 (308)
T 3g33_A 162 ADFGLARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGL 237 (308)
T ss_dssp CSCSCTTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHHHCC
T ss_pred eeCccccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 9999998664322 234557899999999998899999999999999999999999999764222 222222222111
Q ss_pred CC---CCcccc---ccch--hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 513 HG---LPKIAD---ANLL--REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 513 ~~---~~~~~~---~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.. ++.... .... ..........++++.+.++|.+||+.||++|||+.|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 238 PPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 11 110000 0000 0000111223456778899999999999999999999986
No 134
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7.6e-43 Score=344.75 Aligned_cols=265 Identities=25% Similarity=0.385 Sum_probs=213.1
Q ss_pred HHhhcCCCcCC-eecccccccEEEEEe---CCCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCC
Q 008012 287 ERATDGFNECN-LLGSGGFGSVYKGIL---SDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN 360 (581)
Q Consensus 287 ~~~~~~y~~~~-~lg~G~~~~v~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 360 (581)
....++|.+.+ .||+|+||.||+|.+ .+++.||+|+++... ....+.+.+|++++++++||||+++++++ ..+
T Consensus 12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~ 90 (291)
T 1xbb_A 12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 90 (291)
T ss_dssp BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence 33456788888 999999999999964 257889999997653 23456799999999999999999999999 566
Q ss_pred eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..++||||+++++|.+++..... +++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++..
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 91 SWMLVMEMAELGPLNKYLQQNRH-VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp SEEEEEECCTTEEHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred CcEEEEEeCCCCCHHHHHHhCcC-CCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 78999999999999999987643 789999999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCcc-eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 441 LGEGDDSV-IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 441 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
........ ......+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ......+........+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~-- 242 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLEKGERMGCP-- 242 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTTCCCCCC--
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCCCCCC--
Confidence 75443322 1223346788999999988889999999999999999999 9999976422 2222222222111111
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHhh
Q 008012 519 ADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLED 575 (581)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 575 (581)
..+++.+.+++.+||+.||++|||+.++++.|+++.......
T Consensus 243 ---------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~ 284 (291)
T 1xbb_A 243 ---------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 284 (291)
T ss_dssp ---------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhc
Confidence 134567889999999999999999999999999998877654
No 135
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.4e-43 Score=343.45 Aligned_cols=251 Identities=22% Similarity=0.356 Sum_probs=187.6
Q ss_pred hhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchHH---HHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQ---AFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|.. .+++.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 346799999999999999999996 47999999999765322 23678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999987677899999999999999999999 899999999999999999999999999999876432
Q ss_pred CCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
.. ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||........ ........ . .
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~~---~---~-- 230 (278)
T 3cok_A 166 HE--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LNKVVLAD---Y---E-- 230 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCSSC---C---C--
T ss_pred CC--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HHHHhhcc---c---C--
Confidence 22 12335689999999999998999999999999999999999999976322110 11110000 0 0
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+..++..+.+++.+||+.||++|||+++++++
T Consensus 231 -------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 231 -------MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -------CccccCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 011234568899999999999999999999885
No 136
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.2e-42 Score=342.30 Aligned_cols=267 Identities=17% Similarity=0.213 Sum_probs=209.9
Q ss_pred HhhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeee-ecCCeeeEE
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC-CNTNFKALV 365 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~~lv 365 (581)
...++|++.+.||+|+||.||+|.. .+++.||+|++..... ...+.+|+++++.++|++++..+..+ ...+..++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 3467899999999999999999996 4789999998765432 24578899999999888777666655 667788999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCcEEEeeccCceecC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLG 442 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~ 442 (581)
|||+ +++|.+++......+++..++.++.||+.||+||| +.||+||||||+||++ +.++.+||+|||++....
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999 99999999976667899999999999999999999 8999999999999999 788999999999998775
Q ss_pred CCCCc-----ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccc--cHHHHHHhhCCCCC
Q 008012 443 EGDDS-----VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM--NLKNWVKESLPHGL 515 (581)
Q Consensus 443 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~~~ 515 (581)
..... .......|++.|+|||++.+..++.++|||||||++|+|++|+.||........ .............
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~- 238 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP- 238 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch-
Confidence 43321 122345789999999999999999999999999999999999999976432211 1111111111000
Q ss_pred CccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 516 PKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
.......+++.+.+++.+||+.||++|||++++++.|+++..+...
T Consensus 239 -------------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~ 284 (296)
T 4hgt_A 239 -------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp -------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTC
T ss_pred -------------hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 0011123467799999999999999999999999999999887653
No 137
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.5e-42 Score=339.79 Aligned_cols=247 Identities=24% Similarity=0.373 Sum_probs=183.7
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 468999999999999999999954 78999999997642 23346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||+ ++++.+++..... +++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 92 ~e~~-~~~l~~~~~~~~~-~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRDK-MSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTSSS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 6788888876544 789999999999999999999 8999999999999999999999999999998664332
Q ss_pred CcceeeccccCccccCCCCCCCCCC-CccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNV-SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
......|++.|+|||++.+..+ +.++||||||+++|+|++|+.||...... .....+..... ..+
T Consensus 167 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~-~~~-------- 232 (275)
T 2eue_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNISNGVY-TLP-------- 232 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC-CCC--------
T ss_pred ---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC-CCC--------
Confidence 1234468999999999887765 78999999999999999999999763211 11111221111 111
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..+++.+.+++.+||+.||++|||++|++++
T Consensus 233 ---------~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 233 ---------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ---------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ---------ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1234567899999999999999999999876
No 138
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=346.51 Aligned_cols=265 Identities=22% Similarity=0.269 Sum_probs=202.6
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 468999999999999999999975 69999999886543 344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 446 (581)
||+++++|.+++.... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+........
T Consensus 82 e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 82 EYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp ECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 9999999998887554 4789999999999999999999 89999999999999999999999999999987643322
Q ss_pred cceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCc--------
Q 008012 447 SVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPK-------- 517 (581)
Q Consensus 447 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~-------- 517 (581)
......+++.|+|||++.+ ..++.++||||||+++|+|++|+.||......+ ....+........+.
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 158 --YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD--QLYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHTC
T ss_pred --ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhcccccccccccccc
Confidence 2234578999999998865 678999999999999999999999997643221 111111111110000
Q ss_pred -------cccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 518 -------IADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 518 -------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..++. ...........++..+.+++.+||+.||++|||++|+++|
T Consensus 234 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 234 QYFSGVKIPDPE--DMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGGTTCCCCCCS--SCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccCcCCCcc--ccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000 0000011112456678899999999999999999999976
No 139
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-42 Score=357.98 Aligned_cols=269 Identities=23% Similarity=0.292 Sum_probs=197.0
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcC-CCccceEeeeeecCC--e
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVR-HRNLIKILSSCCNTN--F 361 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~--~ 361 (581)
...++|++.+.||+|+||.||+|.+. +|+.||+|++... .......+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 45688999999999999999999965 7999999998543 3445567889999999996 999999999997544 7
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceec
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
.|+||||++ ++|.+++... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||+|+.+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999997 5999999874 4788999999999999999999 899999999999999999999999999999876
Q ss_pred CCCC-------------------CcceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccc
Q 008012 442 GEGD-------------------DSVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM 501 (581)
Q Consensus 442 ~~~~-------------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~ 501 (581)
.... .........||+.|+|||++.+ ..++.++|||||||++|||++|++||..... ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~ 238 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST-MN 238 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH-HH
Confidence 4311 1112334579999999998876 6789999999999999999999999976422 11
Q ss_pred cHHHHHHhhCCCCCCccc----cc---cchh---------------hh-------hhhhHHHHHHHHHHHHHHhccCcCC
Q 008012 502 NLKNWVKESLPHGLPKIA----DA---NLLR---------------EE-------NFFSARMDCLLSIFHLALDCCAELP 552 (581)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~----~~---~~~~---------------~~-------~~~~~~~~~~~~l~~li~~cl~~dP 552 (581)
.+...+ ........... .+ .... .. ........+++.+.+|+.+||..||
T Consensus 239 ~~~~i~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP 317 (388)
T 3oz6_A 239 QLERII-GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNP 317 (388)
T ss_dssp HHHHHH-HHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSG
T ss_pred HHHHHH-HhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCc
Confidence 222222 11111100000 00 0000 00 0000011346678999999999999
Q ss_pred CCCCCHHHHHHH
Q 008012 553 DQRLYMKDAATK 564 (581)
Q Consensus 553 ~~Rps~~evl~~ 564 (581)
++|||++|+++|
T Consensus 318 ~~R~t~~e~l~H 329 (388)
T 3oz6_A 318 NKRISANDALKH 329 (388)
T ss_dssp GGSCCHHHHTTS
T ss_pred ccCCCHHHHhCC
Confidence 999999999988
No 140
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.3e-43 Score=369.59 Aligned_cols=262 Identities=26% Similarity=0.428 Sum_probs=209.3
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
.++...++|++.+.||+|+||.||+|.++++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++
T Consensus 178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp CSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence 34456678999999999999999999988778899999986532 23578999999999999999999999876 67899
Q ss_pred EEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 365 VLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
||||+++|+|.+++... +..+++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||++.....
T Consensus 256 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp EECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred EehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999999999853 345789999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
... .......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.......
T Consensus 333 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~~~-------- 401 (452)
T 1fmk_A 333 NEY-TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERGYRMP-------- 401 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCCC--------
T ss_pred Cce-ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCC--------
Confidence 221 12233456789999999988899999999999999999999 99999764221 1222222211111
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
.+..+++.+.++|.+||+.||++|||++++++.|+.+...
T Consensus 402 ---------~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 402 ---------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp ---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred ---------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 1123556788999999999999999999999999987643
No 141
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.6e-42 Score=338.72 Aligned_cols=249 Identities=24% Similarity=0.313 Sum_probs=203.9
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH---HHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 4578999999999999999999965 678999999866532 224568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
||||+++++|.+++..... +++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 9999999999999986543 788999999999999999999 899999999999999999999999999998654322
Q ss_pred CCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
......|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .....+.... ...+.
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~-~~~~~------- 228 (279)
T 3fdn_A 163 ----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYKRISRVE-FTFPD------- 228 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTC-CCCCT-------
T ss_pred ----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHHHHHHhCC-CCCCC-------
Confidence 123457899999999999999999999999999999999999999753211 1111111111 11111
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
.++..+.+++.+||+.||++|||++|+++|-
T Consensus 229 ----------~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 229 ----------FVTEGARDLISRLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp ----------TSCHHHHHHHHHHCCSSGGGSCCHHHHHHCH
T ss_pred ----------cCCHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 2345678999999999999999999999973
No 142
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-42 Score=350.29 Aligned_cols=252 Identities=25% Similarity=0.366 Sum_probs=200.4
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCC------
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN------ 360 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 360 (581)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3467899999999999999999976 89999999997543 334577899999999999999999999985543
Q ss_pred ---------------------------------------------------eeeEEEeccCCCCHHHHHhhCCC--CCCH
Q 008012 361 ---------------------------------------------------FKALVLEFMPNGSLDKWLYSHNY--FQDI 387 (581)
Q Consensus 361 ---------------------------------------------------~~~lv~e~~~~~~L~~~l~~~~~--~~~~ 387 (581)
..++||||+++++|.+++..... ..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 37999999999999999986543 2355
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCc----------ceeeccccCc
Q 008012 388 PDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS----------VIQTMTIATI 457 (581)
Q Consensus 388 ~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~~~~ 457 (581)
..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++......... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 678999999999999999 899999999999999999999999999999987543221 1223456999
Q ss_pred cccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHH
Q 008012 458 GYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCL 537 (581)
Q Consensus 458 ~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (581)
.|+|||++.+..++.++|||||||++|||++|..|+... ............+ ......+
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~~~~~~~--------------~~~~~~~ 299 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDVRNLKFP--------------LLFTQKY 299 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHHHTTCCC--------------HHHHHHC
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHhhccCCC--------------cccccCC
Confidence 999999999999999999999999999999998774321 1111111111111 1223445
Q ss_pred HHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 538 LSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 538 ~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+.+.+++.+||+.||++|||++|++++
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 667899999999999999999999975
No 143
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-42 Score=345.61 Aligned_cols=264 Identities=20% Similarity=0.262 Sum_probs=203.3
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
...++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34578999999999999999999965 78999999997652 344577899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||+++++|.+++...+ .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 111 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 9999999999999998754 3789999999999999999999 89999999999999999999999999999986643
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
... .......+++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+....+. +.
T Consensus 187 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~--~~------ 255 (309)
T 2h34_A 187 EKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR--PS------ 255 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC--GG------
T ss_pred ccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC--cc------
Confidence 221 1223456899999999999999999999999999999999999999763221 111212111110 00
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCC-CHHHHHHHHHHhHHHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRL-YMKDAATKLKKIRDKFL 573 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~~~~~~~ 573 (581)
.....++..+.+++.+||+.||++|| +++++++.|+++.+...
T Consensus 256 -------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 256 -------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp -------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred -------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 01123455688999999999999999 99999999998865544
No 144
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.4e-42 Score=347.89 Aligned_cols=253 Identities=20% Similarity=0.257 Sum_probs=208.0
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHH------HHHHHHHHHHHHHhcCCCccceEeeeeecCCe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQ------AFRSFNSECEVLRNVRHRNLIKILSSCCNTNF 361 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 361 (581)
..++|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 4567999999999999999999965 7899999998764311 24678899999999999999999999999999
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----cEEEeeccC
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM----VAHVSDFGI 437 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~----~~kl~Dfg~ 437 (581)
.++||||+++++|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++ .+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 999999999999999998654 4789999999999999999999 89999999999999999887 799999999
Q ss_pred ceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCc
Q 008012 438 SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPK 517 (581)
Q Consensus 438 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 517 (581)
+........ .....|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+..... ..+
T Consensus 166 ~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~-~~~- 238 (321)
T 2a2a_A 166 AHEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANITSVSY-DFD- 238 (321)
T ss_dssp CEECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHTTCC-CCC-
T ss_pred ceecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhccc-ccC-
Confidence 987654322 23456899999999999999999999999999999999999999763221 11111111110 000
Q ss_pred cccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 518 IADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
. .....++..+.+++.+||..||++|||+.|+++|
T Consensus 239 ---~---------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 239 ---E---------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp ---H---------HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ---h---------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 1112345678899999999999999999999986
No 145
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.9e-42 Score=350.04 Aligned_cols=247 Identities=26% Similarity=0.344 Sum_probs=203.3
Q ss_pred cCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccc---hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEE
Q 008012 291 DGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
+.|+..+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999996 47999999998643 3445567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 446 (581)
||++ |+|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 5888888766667899999999999999999999 889999999999999999999999999999865432
Q ss_pred cceeeccccCccccCCCCC---CCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 447 SVIQTMTIATIGYMAPEFG---SEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 447 ~~~~~~~~~~~~y~aPE~~---~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
....||+.|+|||++ .+..++.++|||||||++|||++|+.||...... ........... +....
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-~~~~~~~~~~~----~~~~~--- 275 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNES----PALQS--- 275 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCC----CCCCC---
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhcCC----CCCCC---
Confidence 234689999999987 3568899999999999999999999999763221 11111111111 11111
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
..++..+.++|.+||+.||++|||+++++++-
T Consensus 276 ----------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 276 ----------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp ----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred ----------CCCCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 12345688999999999999999999998763
No 146
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.9e-42 Score=354.31 Aligned_cols=252 Identities=20% Similarity=0.286 Sum_probs=195.7
Q ss_pred hhcCCCcC-CeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhc-CCCccceEeeeeec----CCe
Q 008012 289 ATDGFNEC-NLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRNLIKILSSCCN----TNF 361 (581)
Q Consensus 289 ~~~~y~~~-~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~----~~~ 361 (581)
..++|.+. +.||+|+||.||+|..+ +++.||||+++.. ..+.+|++++.++ +||||+++++++.. .+.
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 34567776 68999999999999965 7899999999754 2456788887554 89999999999865 567
Q ss_pred eeEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCcEEEeeccC
Q 008012 362 KALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE---NMVAHVSDFGI 437 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~---~~~~kl~Dfg~ 437 (581)
.++||||+++|+|.+++.... ..+++..+..++.||+.||.||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccc
Confidence 899999999999999998753 45899999999999999999999 899999999999999997 78999999999
Q ss_pred ceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccc--cHHHHHHhhCCCCC
Q 008012 438 SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM--NLKNWVKESLPHGL 515 (581)
Q Consensus 438 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~~~ 515 (581)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .....+...... .
T Consensus 211 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~-~ 286 (400)
T 1nxk_A 211 AKETTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE-F 286 (400)
T ss_dssp CEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC-C
T ss_pred ccccCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc-C
Confidence 98764322 22345789999999999999999999999999999999999999976432221 122222211110 0
Q ss_pred CccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 516 PKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
+. .....++.++.+||.+||..||++|||+.|+++|-
T Consensus 287 ~~-------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 287 PN-------------PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp CT-------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred CC-------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00 01123456788999999999999999999999874
No 147
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.5e-42 Score=343.24 Aligned_cols=252 Identities=25% Similarity=0.327 Sum_probs=205.4
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
..++|.+.+.||+|+||.||+|... +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 4567999999999999999999965 799999999987655455678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCcEEEeeccCceecCCC
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~~~ 444 (581)
|+++++|.+++...+ .+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++......
T Consensus 87 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 87 LVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred cCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 999999999997654 3789999999999999999999 8999999999999999 78889999999999764322
Q ss_pred CCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
......|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+....... +.
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~-~~------- 228 (304)
T 2jam_A 163 ----IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKLFEKIKEGYYEF-ES------- 228 (304)
T ss_dssp ----TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHCCCCC-CT-------
T ss_pred ----ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCCCCC-Cc-------
Confidence 12334689999999999999999999999999999999999999976322 12222222211110 00
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+....++..+.+++.+||..||++|||++|++++
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 229 ------PFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp ------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0111345678899999999999999999999986
No 148
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.2e-42 Score=342.33 Aligned_cols=266 Identities=17% Similarity=0.211 Sum_probs=213.5
Q ss_pred hhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeee-ecCCeeeEEE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSC-CNTNFKALVL 366 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~~lv~ 366 (581)
..++|++.+.||+|+||.||+|.. .+++.||+|++...... +.+.+|+.+++.++|++++..+..+ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 457899999999999999999996 48999999998655322 3578899999999988766666555 5677889999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCcEEEeeccCceecCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~~ 443 (581)
||+ +++|.+++......+++..++.++.|++.||+||| ++||+||||||+||++ +.++.+||+|||++.....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 89999999876667899999999999999999999 8999999999999999 4888999999999987754
Q ss_pred CCCcc-----eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc--ccHHHHHHhhCCCCCC
Q 008012 444 GDDSV-----IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE--MNLKNWVKESLPHGLP 516 (581)
Q Consensus 444 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~--~~~~~~~~~~~~~~~~ 516 (581)
..... ......|++.|+|||++.+..++.++|||||||++|||++|+.||....... ..............
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-- 238 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-- 238 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC--
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc--
Confidence 33211 1234578999999999999999999999999999999999999998643221 11111111111000
Q ss_pred ccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 517 KIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
.......+++.+.+++.+||+.||++|||++++++.|+++..+...
T Consensus 239 ------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~ 284 (296)
T 3uzp_A 239 ------------IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGF 284 (296)
T ss_dssp ------------HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred ------------hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcCC
Confidence 0011123567799999999999999999999999999999877654
No 149
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.2e-42 Score=364.53 Aligned_cols=264 Identities=20% Similarity=0.206 Sum_probs=199.5
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecC------
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNT------ 359 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------ 359 (581)
..++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 4578999999999999999999965 7899999999754 344567788999999999999999999998654
Q ss_pred CeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCce
Q 008012 360 NFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK 439 (581)
Q Consensus 360 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~ 439 (581)
...|+||||+++ ++.+.+.. .+++..+..++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 457999999976 57676643 3788999999999999999999 8999999999999999999999999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccc
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIA 519 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (581)
...... ......||+.|+|||++.+..++.++||||+||++|||++|++||..... ...+...+. ......+...
T Consensus 213 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~-~~~~~~i~~-~lg~p~~~~~ 287 (464)
T 3ttj_A 213 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY-IDQWNKVIE-QLGTPCPEFM 287 (464)
T ss_dssp ----CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH-HHCSCCHHHH
T ss_pred ecCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHH-hcCCCCHHHH
Confidence 764322 23456789999999999999999999999999999999999999976321 111222111 1111111100
Q ss_pred cc------------------cchhhh------hhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 520 DA------------------NLLREE------NFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 520 ~~------------------~~~~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.. .+.... .........++.+.+|+.+||..||++|||++|+++|
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 288 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 000000 0011122336678999999999999999999999987
No 150
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.5e-42 Score=346.89 Aligned_cols=257 Identities=23% Similarity=0.273 Sum_probs=200.3
Q ss_pred hcCCCcC-CeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeeeEEE
Q 008012 290 TDGFNEC-NLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 290 ~~~y~~~-~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
.+.|++. +.||+|+||.||+|... +++.||||++..........+.+|++++.++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 4678885 78999999999999954 7999999999766544456788999999995 7999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---EEEeeccCceecCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV---AHVSDFGISKLLGE 443 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~---~kl~Dfg~a~~~~~ 443 (581)
||+++++|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++. +||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 166 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKL 166 (316)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----
T ss_pred EcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccccc
Confidence 9999999999998754 3789999999999999999999 889999999999999997765 99999999986542
Q ss_pred CCC-----cceeeccccCccccCCCCCCC-----CCCCccccHHHHHHHHHHHHhCCCCCCcccccccc-----------
Q 008012 444 GDD-----SVIQTMTIATIGYMAPEFGSE-----GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMN----------- 502 (581)
Q Consensus 444 ~~~-----~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~----------- 502 (581)
... ........|++.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 167 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 246 (316)
T 2ac3_A 167 NGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQ 246 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHH
T ss_pred CCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHH
Confidence 211 111223458999999998765 56889999999999999999999999764332210
Q ss_pred --HHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 503 --LKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 503 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+...+..... .++ ......++..+.+++.+||+.||++|||++|+++|
T Consensus 247 ~~~~~~i~~~~~-~~~-------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 247 NMLFESIQEGKY-EFP-------------DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHCCC-CCC-------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHhccCc-ccC-------------chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1111111100 000 01112355678899999999999999999999986
No 151
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.5e-44 Score=354.53 Aligned_cols=268 Identities=23% Similarity=0.363 Sum_probs=193.0
Q ss_pred hcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHh--cCCCccceEeeeeecCC----eee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRN--VRHRNLIKILSSCCNTN----FKA 363 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~~iv~~~~~~~~~~----~~~ 363 (581)
.++|++.+.||+|+||.||+|... ++.||||++..... ..+.+|.+++.. ++||||+++++++...+ ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TTH---HHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccch---hhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 468999999999999999999875 89999999876543 356678888887 69999999999998766 789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCceecCCCCCCeEecCCCcEEEeeccCc
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG-----HSTPVVHCDLKPSNILLDENMVAHVSDFGIS 438 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-----~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a 438 (581)
+||||+++|+|.+++.... +++..++.++.|++.||+|||.. ++.||+||||||+||+++.++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEEECCTTCCHHHHHHHCC--BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEEeccCCCCHHHHHhccC--cchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 9999999999999997653 57788899999999999999932 2578999999999999999999999999999
Q ss_pred eecCCCCCcc--eeeccccCccccCCCCCCCC------CCCccccHHHHHHHHHHHHhC----------CCCCCcccccc
Q 008012 439 KLLGEGDDSV--IQTMTIATIGYMAPEFGSEG------NVSSKCDVYSYGILLLETFTR----------KKPTDEMFTGE 500 (581)
Q Consensus 439 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~vl~el~tg----------~~Pf~~~~~~~ 500 (581)
.......... ......||+.|+|||++.+. .++.++|||||||++|||++| ..||.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3gxj_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-C
T ss_pred eeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCC
Confidence 7664433221 12334689999999988776 445689999999999999999 66665543322
Q ss_pred ccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 501 MNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
..................... ......+++.+.+++.+||+.||++|||++|+++.|+++..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 236 PSVEEMRKVVCEQKLRPNIPN--------RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCCC-CHHHHTTSCCCCCCCG--------GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred ccHHHHHHHHHHhhcCCCccc--------cccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 222222221111111111111 111235667899999999999999999999999999988643
No 152
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.8e-43 Score=343.24 Aligned_cols=254 Identities=27% Similarity=0.404 Sum_probs=203.2
Q ss_pred HhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecC-CeeeEEE
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNT-NFKALVL 366 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~lv~ 366 (581)
...++|++.+.||+|+||.||+|... |+.||+|+++... ..+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 18 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred CChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 34578999999999999999999885 8999999997654 346788999999999999999999987554 5789999
Q ss_pred eccCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 367 EFMPNGSLDKWLYSHNY-FQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
||+++++|.+++..... .+++..++.++.|++.||+||| +.|++||||||+||+++.++.+||+|||++.......
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 171 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ 171 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence 99999999999986532 3688899999999999999999 8999999999999999999999999999998653321
Q ss_pred CcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
....+++.|+|||.+.+..++.++||||||+++|+|++ |+.||..... ......+........
T Consensus 172 -----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~~~~~~~~~~--------- 235 (278)
T 1byg_A 172 -----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKMDA--------- 235 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHHHTTTCCCCC---------
T ss_pred -----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCCCCC---------
Confidence 23357889999999988899999999999999999998 9999976422 122222221111111
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
+..+++.+.+++.+||+.||++|||+.|+++.|++++..
T Consensus 236 --------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 236 --------PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 113456788999999999999999999999999999765
No 153
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.5e-42 Score=348.61 Aligned_cols=259 Identities=28% Similarity=0.435 Sum_probs=207.5
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEE--EEEEeccch-HHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeeeE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTV--AIKIFNLQL-EQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~v--avK~~~~~~-~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l 364 (581)
.++|++.+.||+|+||.||+|+.. ++..+ |+|.++... ....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 367899999999999999999965 56654 999887542 34456788999999999 89999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 008012 365 VLEFMPNGSLDKWLYSHN---------------YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV 429 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~ 429 (581)
||||+++++|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCe
Confidence 999999999999998654 35799999999999999999999 899999999999999999999
Q ss_pred EEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHH
Q 008012 430 AHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVK 508 (581)
Q Consensus 430 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~ 508 (581)
+||+|||++..... ........+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+.
T Consensus 181 ~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~ 255 (327)
T 1fvr_A 181 AKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLP 255 (327)
T ss_dssp EEECCTTCEESSCE---ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHGG
T ss_pred EEEcccCcCccccc---cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--HHHHHhh
Confidence 99999999974321 112233456889999999988889999999999999999998 99999763221 1111111
Q ss_pred hhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 509 ESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
...... .+..+++.+.+++.+||..||++|||++|++++|+++.++..
T Consensus 256 ~~~~~~-----------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 256 QGYRLE-----------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp GTCCCC-----------------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred cCCCCC-----------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 111100 011344568899999999999999999999999999877544
No 154
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.2e-43 Score=359.54 Aligned_cols=276 Identities=21% Similarity=0.296 Sum_probs=213.4
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCC--eeeEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN--FKALV 365 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~lv 365 (581)
.++|.+.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 467999999999999999999976 69999999997643 233456789999999999999999999988755 78999
Q ss_pred EeccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----cCCCcEEEeeccCce
Q 008012 366 LEFMPNGSLDKWLYSHN--YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL----DENMVAHVSDFGISK 439 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill----~~~~~~kl~Dfg~a~ 439 (581)
|||+++|+|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+||++ +.++.+||+|||++.
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999998643 23799999999999999999999 8999999999999999 778889999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCCC--------CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHH--HHh
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGSE--------GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNW--VKE 509 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~--~~~ 509 (581)
...... ......|++.|+|||++.+ ..++.++|||||||++|||++|+.||............. +..
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp ECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred EccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 764322 2234568999999998764 567889999999999999999999997543322222111 111
Q ss_pred hCCCC-CCccccc---cc--hhh-hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 510 SLPHG-LPKIADA---NL--LRE-ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 510 ~~~~~-~~~~~~~---~~--~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
..+.. +...... .+ ... .........++..+.+++.+||+.||++|||++|+++.++++.++
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11111 1111000 00 000 001112246777899999999999999999999999999887653
No 155
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-42 Score=351.38 Aligned_cols=272 Identities=24% Similarity=0.288 Sum_probs=203.4
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHH-----HHHHHHHHHHHHHhcCCCccceEeeeeecC
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQ-----AFRSFNSECEVLRNVRHRNLIKILSSCCNT 359 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 359 (581)
+....++|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.
T Consensus 5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (346)
T 1ua2_A 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 84 (346)
T ss_dssp --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence 4455688999999999999999999965 7899999999754321 124678999999999999999999999999
Q ss_pred CeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCce
Q 008012 360 NFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK 439 (581)
Q Consensus 360 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~ 439 (581)
+..++||||+++ +|.+++......+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.
T Consensus 85 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 85 SNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp TCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred CceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999999976 899999887767889999999999999999999 8999999999999999999999999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCCCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC---C
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG---L 515 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---~ 515 (581)
....... ......+|+.|+|||++.+. .++.++|||||||++|||++|.+||..... ...+........... .
T Consensus 161 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~~~~~~~~~~~~ 237 (346)
T 1ua2_A 161 SFGSPNR--AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQW 237 (346)
T ss_dssp TTTSCCC--CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTS
T ss_pred eccCCcc--cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHcCCCChhhh
Confidence 7643322 23345789999999988654 589999999999999999999999876422 122222222211111 1
Q ss_pred Ccccc---c---cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 516 PKIAD---A---NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 516 ~~~~~---~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+.... . ......+.......++..+.++|.+||..||++|||++|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 11000 0 0000000011123455778999999999999999999999986
No 156
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.4e-42 Score=358.36 Aligned_cols=254 Identities=25% Similarity=0.347 Sum_probs=197.5
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--------HHHHHHHHHHHHHHHhcCCCccceEeeeeec
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--------EQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 358 (581)
...++|.+.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 45688999999999999999999965 78999999987542 1222357899999999999999999999754
Q ss_pred CCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---cEEEeec
Q 008012 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM---VAHVSDF 435 (581)
Q Consensus 359 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~---~~kl~Df 435 (581)
+..++||||+++|+|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++ .+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeec
Confidence 55799999999999999887654 4789999999999999999999 88999999999999997544 5999999
Q ss_pred cCceecCCCCCcceeeccccCccccCCCCCCC---CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 008012 436 GISKLLGEGDDSVIQTMTIATIGYMAPEFGSE---GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLP 512 (581)
Q Consensus 436 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 512 (581)
|+++...... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..... ...+...+.....
T Consensus 287 G~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~i~~~~~ 362 (419)
T 3i6u_A 287 GHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKY 362 (419)
T ss_dssp STTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS-SCCHHHHHHTTCC
T ss_pred ccceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc-hHHHHHHHhcCCC
Confidence 9998764322 2334578999999998753 6788899999999999999999999976432 2233333332221
Q ss_pred CCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 513 HGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...+ .....+++.+.+++.+||+.||++|||++|+++|
T Consensus 363 ~~~~--------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 363 NFIP--------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCCH--------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCc--------------hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 1111 1122345678899999999999999999999986
No 157
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9.9e-43 Score=364.73 Aligned_cols=250 Identities=24% Similarity=0.263 Sum_probs=198.4
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|... +|+.||+|+++... ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 4578999999999999999999965 79999999997652 3344567889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHS-TPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
||||+++|+|.+++.... .+++..+..++.||+.||+||| + .||+||||||+|||++.++.+||+|||++.....
T Consensus 226 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 999999999999998654 4789999999999999999999 6 8999999999999999999999999999985432
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... ..++
T Consensus 302 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~~-~~~p------- 369 (446)
T 4ejn_A 302 DG--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILMEE-IRFP------- 369 (446)
T ss_dssp -------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-CCCC-------
T ss_pred CC--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHHHhCC-CCCC-------
Confidence 22 223446799999999999999999999999999999999999999976322 11222222111 1111
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRL-----YMKDAATK 564 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 564 (581)
..+++.+.++|.+||+.||++|| +++|+++|
T Consensus 370 ----------~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 370 ----------RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp ----------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ----------ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 12345688999999999999999 99999986
No 158
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.5e-43 Score=354.39 Aligned_cols=267 Identities=11% Similarity=0.105 Sum_probs=211.2
Q ss_pred hcCCCcCCeecccccccEEEEEeCC---------CcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccce---------
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILSD---------GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIK--------- 351 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~--------- 351 (581)
.++|++.+.||+|+||.||+|.... ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 4789999999999999999999763 789999998765 35778999999999999988
Q ss_pred ------Eeeeeec-CCeeeEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeE
Q 008012 352 ------ILSSCCN-TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNIL 423 (581)
Q Consensus 352 ------~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nil 423 (581)
+++++.. .+..++||||+ +++|.+++... ...+++..++.++.||+.||+||| +.||+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEE
Confidence 5666665 67889999999 99999999875 355899999999999999999999 889999999999999
Q ss_pred ecCCC--cEEEeeccCceecCCCCCc-----ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Q 008012 424 LDENM--VAHVSDFGISKLLGEGDDS-----VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEM 496 (581)
Q Consensus 424 l~~~~--~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~ 496 (581)
++.++ .+||+|||++..+...... .......|++.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999876432211 1123347899999999999999999999999999999999999999875
Q ss_pred ccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 497 FTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
............... .......+... ....++..+.+++.+||+.||++|||++++++.|+++.++...
T Consensus 272 ~~~~~~~~~~~~~~~-~~~~~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 272 LPNTEDIMKQKQKFV-DKPGPFVGPCG--------HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp TTCHHHHHHHHHHHH-HSCCCEECTTS--------CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHhcc-CChhhhhhhcc--------ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcCC
Confidence 433322322222111 11111111100 0012345788999999999999999999999999999877653
No 159
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=354.33 Aligned_cols=260 Identities=16% Similarity=0.139 Sum_probs=212.3
Q ss_pred hhHHHhhcCCCcCCeecccccccEEEEE------eCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcC---CCccceEee
Q 008012 284 LDLERATDGFNECNLLGSGGFGSVYKGI------LSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR---HRNLIKILS 354 (581)
Q Consensus 284 ~~~~~~~~~y~~~~~lg~G~~~~v~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~ 354 (581)
.+++...++|.+.+.||+|+||.||+|. ..+++.||+|+++..... .+.+|++++++++ |+||+++++
T Consensus 58 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~e~~~~~~l~~~~~~~iv~~~~ 134 (365)
T 3e7e_A 58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW---EFYIGTQLMERLKPSMQHMFMKFYS 134 (365)
T ss_dssp CEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHH---HHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred eeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChh---HHHHHHHHHHHhhhhhhhhhhhhhe
Confidence 3445567889999999999999999994 447899999999876543 5677888888886 999999999
Q ss_pred eeecCCeeeEEEeccCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC----
Q 008012 355 SCCNTNFKALVLEFMPNGSLDKWLYS----HNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE---- 426 (581)
Q Consensus 355 ~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~---- 426 (581)
++...+..++||||+++|+|.+++.. ....+++..++.++.||+.||+||| +.||+||||||+|||++.
T Consensus 135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~ 211 (365)
T 3e7e_A 135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLE 211 (365)
T ss_dssp EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTC
T ss_pred eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccC
Confidence 99999999999999999999999985 3455899999999999999999999 899999999999999998
Q ss_pred -------CCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccc
Q 008012 427 -------NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTG 499 (581)
Q Consensus 427 -------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~ 499 (581)
++.+||+|||+|..+.............||+.|+|||++.+..++.++|||||||++|||+||+.||.....+
T Consensus 212 ~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~ 291 (365)
T 3e7e_A 212 QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG 291 (365)
T ss_dssp C------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT
T ss_pred ccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC
Confidence 8999999999998765434444455667999999999999999999999999999999999999998653222
Q ss_pred cccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCC-CCHHHHHHHHHHhHHHHH
Q 008012 500 EMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQR-LYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-ps~~evl~~L~~~~~~~~ 573 (581)
.... ...+... ..++.+.+++..|++.+|.+| |+++++.+.|+++..+..
T Consensus 292 ~~~~--------~~~~~~~----------------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 292 ECKP--------EGLFRRL----------------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp EEEE--------CSCCTTC----------------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ceee--------chhcccc----------------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 1110 0000000 113456789999999999998 578888888888876643
No 160
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-42 Score=340.48 Aligned_cols=252 Identities=26% Similarity=0.306 Sum_probs=199.6
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
..++|.+.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 3467899999999999999999965 78999999987654 223467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCcEEEeeccCcee
Q 008012 367 EFMPNGSLDKWLYSH---NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKL 440 (581)
Q Consensus 367 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~ 440 (581)
||+++++|.+++... +..+++..++.++.|++.||+||| +.||+||||||+||++ +.++.+||+|||++..
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 999999999998643 355899999999999999999999 8999999999999999 4567899999999986
Q ss_pred cCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccc
Q 008012 441 LGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIAD 520 (581)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (581)
..... ......|++.|+|||++. ..++.++||||||+++|+|++|+.||...... ..........+ ....
T Consensus 177 ~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~~-~~~~--- 246 (285)
T 3is5_A 177 FKSDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKATYKEP-NYAV--- 246 (285)
T ss_dssp -------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCCC---
T ss_pred cCCcc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhccCCc-cccc---
Confidence 64322 233456899999999876 47899999999999999999999999764221 11111111111 1000
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 521 ANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
....+++.+.+++.+||+.||++|||+.|++++
T Consensus 247 -----------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 247 -----------ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -----------ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000124567899999999999999999999875
No 161
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=7.6e-43 Score=351.84 Aligned_cols=254 Identities=23% Similarity=0.311 Sum_probs=203.1
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeeeEEE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
..++|++.+.||+|+||.||+|..+ +++.||+|++..... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4577999999999999999999975 789999999976532 234688888888 7999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC----CcEEEeeccCceecC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDEN----MVAHVSDFGISKLLG 442 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~----~~~kl~Dfg~a~~~~ 442 (581)
||++||+|.+++...+ .+++..+..++.||+.||+||| +.||+||||||+||++.++ +.+||+|||++....
T Consensus 96 E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 96 ELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp CCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred eCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 9999999999998765 4799999999999999999999 8999999999999998533 359999999998764
Q ss_pred CCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....+........... ...
T Consensus 172 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~i~~~~~~-~~~-- 244 (342)
T 2qr7_A 172 AENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARIGSGKFS-LSG-- 244 (342)
T ss_dssp CTTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHHHHHHCCCC-CCS--
T ss_pred CCCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHHHHccCCcc-cCc--
Confidence 4322 22345789999999999888899999999999999999999999975322 1222222211111100 000
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
..+..+++.+.++|.+||..||++|||+.|+++|-
T Consensus 245 --------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 245 --------GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp --------TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred --------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 00113456788999999999999999999999863
No 162
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.1e-42 Score=351.92 Aligned_cols=246 Identities=27% Similarity=0.298 Sum_probs=193.1
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHH-HHhcCCCccceEeeeeecCCeee
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEV-LRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~-l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
..++|++.+.||+|+||.||+|+.+ +++.||+|+++... ......+.+|..+ ++.++||||+++++++.+.+..|
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 3467999999999999999999976 68899999997653 2334456677776 46679999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
+||||++||+|.+++.+.+. +++..++.++.||+.||+||| ++||+||||||+||+++.++.+||+|||+++....
T Consensus 116 lv~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRERC-FLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEeCCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 99999999999999987543 688899999999999999999 89999999999999999999999999999986432
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......... ...++
T Consensus 192 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~--~~~~~------- 259 (373)
T 2r5t_A 192 HN--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYDNILNK--PLQLK------- 259 (373)
T ss_dssp CC--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-HHHHHHHHS--CCCCC-------
T ss_pred CC--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhc--ccCCC-------
Confidence 22 1234567999999999999999999999999999999999999999763221 111121111 11111
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKD 560 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 560 (581)
..++..+.++|.+||+.||++||++.+
T Consensus 260 ----------~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 260 ----------PNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp ----------SSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred ----------CCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 123446789999999999999999853
No 163
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=7.3e-43 Score=353.40 Aligned_cols=266 Identities=17% Similarity=0.184 Sum_probs=202.9
Q ss_pred hcCCCcCCeecccccccEEEEEeC----CCcEEEEEEeccchHH-----------HHHHHHHHHHHHHhcCCCccceEee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS----DGTTVAIKIFNLQLEQ-----------AFRSFNSECEVLRNVRHRNLIKILS 354 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~~iv~~~~ 354 (581)
.++|++.+.||+|+||.||+|... ++..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 468999999999999999999965 5788999998764311 1123667889999999999999999
Q ss_pred eeec----CCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC--
Q 008012 355 SCCN----TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM-- 428 (581)
Q Consensus 355 ~~~~----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~-- 428 (581)
++.. ....++||||+ +++|.+++...+ .+++..++.++.||+.||+||| +.||+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9887 67899999999 999999998765 5799999999999999999999 88999999999999999877
Q ss_pred cEEEeeccCceecCCCCCc-----ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccH
Q 008012 429 VAHVSDFGISKLLGEGDDS-----VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNL 503 (581)
Q Consensus 429 ~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~ 503 (581)
.+||+|||+++.+...... .......|++.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999876432211 11134578999999999999899999999999999999999999996533332222
Q ss_pred HHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhH
Q 008012 504 KNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIR 569 (581)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 569 (581)
........ ..++..... ......++..+.+++.+||..||++|||++++++.|+++.
T Consensus 271 ~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 271 QTAKTNLL-DELPQSVLK--------WAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHH-HTTTHHHHH--------HSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHhhc-ccccHHHHh--------hccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 22111111 111110000 0000145667999999999999999999999999998764
No 164
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.8e-42 Score=348.51 Aligned_cols=269 Identities=23% Similarity=0.300 Sum_probs=204.3
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 3568999999999999999999965 68999999985542 34456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||+++++|.++..... .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 103 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 99999988888766544 4799999999999999999999 8999999999999999999999999999998664322
Q ss_pred CcceeeccccCccccCCCCCCCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCC-----------
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH----------- 513 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~----------- 513 (581)
. ......+++.|+|||++.+. .++.++|||||||++|+|++|+.||......+ ............
T Consensus 179 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 179 E--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHC
T ss_pred c--ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhc
Confidence 2 22345689999999988775 78999999999999999999999997643221 111111110000
Q ss_pred -CCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 514 -GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 514 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.......+..............+++.+.+++.+||+.||++|||++|+++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000011111111112223456789999999999999999999999986
No 165
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-42 Score=374.32 Aligned_cols=261 Identities=23% Similarity=0.398 Sum_probs=208.5
Q ss_pred cCCCcCC-eecccccccEEEEEeC---CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 291 DGFNECN-LLGSGGFGSVYKGILS---DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 291 ~~y~~~~-~lg~G~~~~v~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
+++.+.+ .||+|+||.||+|.+. ++..||||+++... ....+.+.+|++++++++||||+++++++.. +..++|
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv 413 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLV 413 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEE
Confidence 3444444 7999999999999854 56679999997653 2345678999999999999999999999976 568999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||+++|+|.+++......+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 414 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp EECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred EEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 9999999999999877777899999999999999999999 8999999999999999999999999999998764332
Q ss_pred Ccc-eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 446 DSV-IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 446 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+........
T Consensus 491 ~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~i~~~~~~~~-------- 560 (613)
T 2ozo_A 491 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFIEQGKRMEC-------- 560 (613)
T ss_dssp -----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHHHHHHHTTCCCCC--------
T ss_pred ceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcCCCCCC--------
Confidence 211 1222345688999999998999999999999999999998 9999986432 222333332221111
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHh
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLE 574 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 574 (581)
+..+++.+.++|.+||+.||++||++.++++.|+.+......
T Consensus 561 ---------p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 561 ---------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp ---------CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred ---------CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 123566789999999999999999999999999998776643
No 166
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.7e-42 Score=363.39 Aligned_cols=252 Identities=25% Similarity=0.335 Sum_probs=209.4
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH---HHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|..+ +|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 4577999999999999999999965 799999999976532 234567899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 365 VLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
||||++||+|.+++...+ ..+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999998654 34799999999999999999999 89999999999999999999999999999987653
Q ss_pred CCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccc--cHHHHHHhhCCCCCCccccc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM--NLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 521 (581)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .+...+.. .+..++
T Consensus 339 ~~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-~~~~~p----- 409 (576)
T 2acx_A 339 GQT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VPEEYS----- 409 (576)
T ss_dssp TCC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-CCCCCC-----
T ss_pred Ccc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-ccccCC-----
Confidence 322 2345799999999999999999999999999999999999999986432211 12222221 111111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRL-----YMKDAATK 564 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 564 (581)
..++..+.++|.+||..||++|| +++|+++|
T Consensus 410 ------------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 410 ------------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ------------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ------------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 12345688999999999999999 78999876
No 167
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=9.2e-42 Score=336.84 Aligned_cols=248 Identities=24% Similarity=0.358 Sum_probs=200.8
Q ss_pred cCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeec----CCeee
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCN----TNFKA 363 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~ 363 (581)
..|.+.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 44788889999999999999965 78899999987543 4556788999999999999999999998865 45689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEec-CCCcEEEeeccCcee
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTP--VVHCDLKPSNILLD-ENMVAHVSDFGISKL 440 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dikp~Nill~-~~~~~kl~Dfg~a~~ 440 (581)
+||||+++++|.+++..... +++..++.++.|++.||+||| +.+ |+||||||+||+++ .++.+||+|||++..
T Consensus 106 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKV-MKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEecCCCCHHHHHHHccC-CCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 99999999999999987543 788999999999999999999 788 99999999999998 789999999999975
Q ss_pred cCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccc
Q 008012 441 LGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIAD 520 (581)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (581)
.... ......|++.|+|||++.+ .++.++||||||+++|+|++|+.||...... ............+...+
T Consensus 182 ~~~~----~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~ 252 (290)
T 1t4h_A 182 KRAS----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYRRVTSGVKPASFD 252 (290)
T ss_dssp CCTT----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHHHHTTTCCCGGGG
T ss_pred cccc----ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH----HHHHHHHhccCCccccC
Confidence 4322 2234568999999998774 5999999999999999999999999763222 22222222111111111
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 521 ANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...++.+.++|.+||+.||++|||++|+++|
T Consensus 253 -------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 253 -------------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -------------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -------------CCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 1223468899999999999999999999875
No 168
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.1e-43 Score=351.97 Aligned_cols=243 Identities=23% Similarity=0.340 Sum_probs=203.5
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH--------HHHHHHHHHHHHHHhcCCCccceEeeeeecC
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE--------QAFRSFNSECEVLRNVRHRNLIKILSSCCNT 359 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 359 (581)
..++|++.+.||+|+||.||+|... +++.||+|+++.... .....+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4578999999999999999999954 789999999876521 1233567899999999999999999999999
Q ss_pred CeeeEEEeccCCC-CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCc
Q 008012 360 NFKALVLEFMPNG-SLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGIS 438 (581)
Q Consensus 360 ~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a 438 (581)
+..++||||+.+| +|.+++..... +++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~-l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPR-LDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCC-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999776 99999987654 799999999999999999999 899999999999999999999999999999
Q ss_pred eecCCCCCcceeeccccCccccCCCCCCCCCC-CccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCc
Q 008012 439 KLLGEGDDSVIQTMTIATIGYMAPEFGSEGNV-SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPK 517 (581)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 517 (581)
........ .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...... ......
T Consensus 178 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------~~~~~~- 242 (335)
T 3dls_A 178 AYLERGKL---FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----------VEAAIH- 242 (335)
T ss_dssp EECCTTCC---BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------TTTCCC-
T ss_pred eECCCCCc---eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------HhhccC-
Confidence 87754332 234568999999999888776 78999999999999999999999753111 000000
Q ss_pred cccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 518 IADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+..+++.+.+++.+||+.||++|||++|++++
T Consensus 243 --------------~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 243 --------------PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --------------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --------------CCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001134568899999999999999999999987
No 169
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.2e-42 Score=338.12 Aligned_cols=254 Identities=24% Similarity=0.361 Sum_probs=207.4
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeec--------
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-------- 358 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 358 (581)
...++|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 34567999999999999999999976 79999999997654 246689999999999999999998854
Q ss_pred --------CCeeeEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 008012 359 --------TNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV 429 (581)
Q Consensus 359 --------~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~ 429 (581)
....++||||+++++|.+++... ...+++..++.++.|++.||.||| +.||+||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTE
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCC
Confidence 44579999999999999999854 345789999999999999999999 889999999999999999999
Q ss_pred EEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHh
Q 008012 430 AHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKE 509 (581)
Q Consensus 430 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~ 509 (581)
+||+|||++........ .....+++.|+|||++.+..++.++||||||+++|+|++|..||... ......
T Consensus 161 ~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~~~ 230 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------SKFFTD 230 (284)
T ss_dssp EEECCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HHHHHH
T ss_pred EEECcchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HHHHHH
Confidence 99999999987654322 23446899999999999889999999999999999999999987431 111111
Q ss_pred hCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHHhh
Q 008012 510 SLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFLED 575 (581)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 575 (581)
.....++. .++..+.+++.+||+.||++|||+.|++++|+.+.+.....
T Consensus 231 ~~~~~~~~-----------------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 231 LRDGIISD-----------------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp HHTTCCCT-----------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred hhcccccc-----------------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 11111111 12345779999999999999999999999999988665543
No 170
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=9.9e-42 Score=337.44 Aligned_cols=253 Identities=25% Similarity=0.350 Sum_probs=201.4
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEec
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEF 368 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 368 (581)
.++|.....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 345666679999999999999964 7899999999876656667899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCcEEEeeccCceecCCCC
Q 008012 369 MPNGSLDKWLYSHN--YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE-NMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 369 ~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~-~~~~kl~Dfg~a~~~~~~~ 445 (581)
+++++|.+++.... ...++..+..++.|++.||+||| +.||+||||||+||+++. ++.+||+|||.+.......
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~ 177 (295)
T 2clq_A 101 VPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN 177 (295)
T ss_dssp CSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred CCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence 99999999998653 23568889999999999999999 889999999999999987 8999999999998764322
Q ss_pred CcceeeccccCccccCCCCCCCCC--CCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGN--VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
.......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||.....................++
T Consensus 178 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------- 248 (295)
T 2clq_A 178 --PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP------- 248 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCC-------
T ss_pred --CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccccc-------
Confidence 1223456899999999886643 78999999999999999999999975322211111111111111111
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..++..+.+++.+||+.||++|||+.|++++
T Consensus 249 ----------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 249 ----------ESMSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp ----------TTSCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred ----------ccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1234568899999999999999999999875
No 171
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.8e-42 Score=348.09 Aligned_cols=269 Identities=23% Similarity=0.265 Sum_probs=198.7
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
...++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 45578999999999999999999955 79999999997553 2334567899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-----CCCcEEEeeccCce
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLD-----ENMVAHVSDFGISK 439 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~-----~~~~~kl~Dfg~a~ 439 (581)
||||+++ +|.+++..... +++..++.++.||+.||+||| +.||+||||||+||+++ .++.+||+|||++.
T Consensus 111 v~e~~~~-~L~~~~~~~~~-~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNPD-VSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCSE-EHHHHHHHCTT-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCCC-CHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 9999975 99999987654 789999999999999999999 89999999999999994 55569999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCCCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC---C
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG---L 515 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---~ 515 (581)
....... ......+|+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+........... .
T Consensus 186 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 186 AFGIPIR--QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTS
T ss_pred ccCCccc--ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchhhh
Confidence 7643221 22345679999999988774 5899999999999999999999999764222 12222222111110 0
Q ss_pred Ccccc--------ccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 516 PKIAD--------ANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 516 ~~~~~--------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+.... +..............+++++.++|.+||+.||++|||++|+++|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 00000 00000000011112255678899999999999999999999875
No 172
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.1e-41 Score=347.16 Aligned_cols=259 Identities=25% Similarity=0.356 Sum_probs=209.7
Q ss_pred hhhHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--------HHHHHHHHHHHHHHHhc-CCCccceE
Q 008012 283 YLDLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--------EQAFRSFNSECEVLRNV-RHRNLIKI 352 (581)
Q Consensus 283 ~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~~iv~~ 352 (581)
+.......++|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3344556678999999999999999999975 79999999986542 23346788999999999 89999999
Q ss_pred eeeeecCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEE
Q 008012 353 LSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHV 432 (581)
Q Consensus 353 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl 432 (581)
++++...+..++||||+++++|.+++.... .+++..+..++.||+.||.||| +.||+||||||+||+++.++.+||
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl 241 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRL 241 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEE
Confidence 999999999999999999999999998654 3789999999999999999999 889999999999999999999999
Q ss_pred eeccCceecCCCCCcceeeccccCccccCCCCCC------CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHH
Q 008012 433 SDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS------EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNW 506 (581)
Q Consensus 433 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~ 506 (581)
+|||++..+..... .....||+.|+|||++. ...++.++|||||||++|+|++|+.||..... ......
T Consensus 242 ~DfG~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~~~~~ 316 (365)
T 2y7j_A 242 SDFGFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--ILMLRM 316 (365)
T ss_dssp CCCTTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHH
T ss_pred EecCcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HHHHHH
Confidence 99999987754322 23457899999999875 33688999999999999999999999976321 111121
Q ss_pred HHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 507 VKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+....... . .+....++..+.+++.+||..||++|||+.|++++
T Consensus 317 i~~~~~~~-~-------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 317 IMEGQYQF-S-------------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHHTCCCC-C-------------HHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhCCCCC-C-------------CcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 21111100 0 01112345678899999999999999999999875
No 173
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.7e-42 Score=340.57 Aligned_cols=253 Identities=25% Similarity=0.274 Sum_probs=191.9
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
...++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.++...++.++||||+++++++.+.+..++
T Consensus 4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 44678999999999999999999964 79999999997652 2333445555566788899999999999999999999
Q ss_pred EEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 365 VLEFMPNGSLDKWLYS---HNYFQDIPDRLNIMIDVALALEYLHHGHST-PVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
||||+++ +|.+++.. .+..+++..++.++.|++.||+||| +. ||+||||||+||+++.++.+||+|||++..
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 159 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-----
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccc
Confidence 9999975 88887764 4556899999999999999999999 76 999999999999999999999999999987
Q ss_pred cCCCCCcceeeccccCccccCCCCC----CCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCC
Q 008012 441 LGEGDDSVIQTMTIATIGYMAPEFG----SEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLP 516 (581)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 516 (581)
..... ......|++.|+|||++ .+..++.++||||||+++|+|++|+.||.............+....+....
T Consensus 160 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 236 (290)
T 3fme_A 160 LVDDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA 236 (290)
T ss_dssp -------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCT
T ss_pred ccccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCccc
Confidence 64322 22334689999999985 566789999999999999999999999976433322233322222111110
Q ss_pred ccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 517 KIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..++..+.+++.+||+.||++|||+.|+++|
T Consensus 237 -----------------~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 237 -----------------DKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp -----------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred -----------------ccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 1234568899999999999999999999985
No 174
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.2e-42 Score=339.27 Aligned_cols=253 Identities=22% Similarity=0.326 Sum_probs=205.3
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeee--cCCeeeE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCC--NTNFKAL 364 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~~~l 364 (581)
.++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++. ..+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 468999999999999999999975 7899999999754 2445678999999999999999999999874 4668899
Q ss_pred EEeccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----ceecCCCCCCeEecCCCcEEEeecc
Q 008012 365 VLEFMPNGSLDKWLYSH---NYFQDIPDRLNIMIDVALALEYLHHGHSTP-----VVHCDLKPSNILLDENMVAHVSDFG 436 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~-----i~H~dikp~Nill~~~~~~kl~Dfg 436 (581)
||||+++++|.+++... ...+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999999853 344799999999999999999999 677 9999999999999999999999999
Q ss_pred CceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCC
Q 008012 437 ISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLP 516 (581)
Q Consensus 437 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 516 (581)
.+........ ......|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+.......++
T Consensus 162 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~~~~~~~~ 237 (279)
T 2w5a_A 162 LARILNHDTS--FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIREGKFRRIP 237 (279)
T ss_dssp HHHHC---CH--HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCCCCC
T ss_pred hheeeccccc--cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHHhhcccccCC
Confidence 9987643221 12344689999999999888999999999999999999999999976422 2222222222211111
Q ss_pred ccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHH
Q 008012 517 KIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLK 566 (581)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 566 (581)
..++..+.+++.+||+.||++|||++|+++++.
T Consensus 238 -----------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 238 -----------------YRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp -----------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred -----------------cccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 123456889999999999999999999998764
No 175
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.5e-41 Score=334.28 Aligned_cols=247 Identities=25% Similarity=0.310 Sum_probs=205.9
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH---HHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
.++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467999999999999999999965 688999999876532 2235788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||+++++|.+++...+. +++..++.++.|++.||.||| +.||+||||||+||+++.++.+||+|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 999999999999987643 789999999999999999999 8999999999999999999999999999997654322
Q ss_pred CcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchh
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLR 525 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (581)
.....|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+.... ..++
T Consensus 169 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~-~~~~--------- 232 (284)
T 2vgo_A 169 ----RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT--ETHRRIVNVD-LKFP--------- 232 (284)
T ss_dssp ----BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTC-CCCC---------
T ss_pred ----cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh--HHHHHHhccc-cCCC---------
Confidence 23456899999999999999999999999999999999999999763221 1111111110 0111
Q ss_pred hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 526 EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 526 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..++..+.++|.+||+.||++|||++|+++|
T Consensus 233 --------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 233 --------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp --------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred --------CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 1234567899999999999999999999986
No 176
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=5.8e-42 Score=337.03 Aligned_cols=257 Identities=21% Similarity=0.282 Sum_probs=206.5
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH------HHHHHHHHHHHHHHhcCCCccceEeeeeecCCee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE------QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFK 362 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 362 (581)
.++|++.+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467899999999999999999976 799999999875421 1246788999999999999999999999999999
Q ss_pred eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC----cEEEeeccCc
Q 008012 363 ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM----VAHVSDFGIS 438 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~----~~kl~Dfg~a 438 (581)
++||||+++++|.+++.... .+++..++.++.|++.||.||| +.||+||||||+||+++.++ .+||+|||.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 99999999999999998654 3789999999999999999999 89999999999999998877 8999999999
Q ss_pred eecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 439 KLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
........ .....+++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+..... ..+
T Consensus 160 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~-~~~-- 231 (283)
T 3bhy_A 160 HKIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ--ETLTNISAVNY-DFD-- 231 (283)
T ss_dssp EECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTCC-CCC--
T ss_pred eeccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH--HHHHHhHhccc-CCc--
Confidence 87643321 23456899999999999999999999999999999999999999763221 11111111100 000
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH--HHHhH
Q 008012 519 ADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK--LKKIR 569 (581)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L~~~~ 569 (581)
......++..+.+++.+||..||++|||+.|++++ ++.++
T Consensus 232 -----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 232 -----------EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp -----------HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred -----------chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 01112345678899999999999999999999985 45544
No 177
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=342.06 Aligned_cols=262 Identities=21% Similarity=0.239 Sum_probs=194.9
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcC-CCccceEeeeee------
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILSSCC------ 357 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~------ 357 (581)
++....+|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|+.+++++. ||||+++++++.
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 3444568999999999999999999965 78999999997776666778999999999995 999999999983
Q ss_pred --cCCeeeEEEeccCCCCHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--ceecCCCCCCeEecCCCcEE
Q 008012 358 --NTNFKALVLEFMPNGSLDKWLYS--HNYFQDIPDRLNIMIDVALALEYLHHGHSTP--VVHCDLKPSNILLDENMVAH 431 (581)
Q Consensus 358 --~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~--i~H~dikp~Nill~~~~~~k 431 (581)
.....++||||++ |+|.+++.. ....+++..++.++.||+.||+||| +.| |+||||||+||+++.++.+|
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEE
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEE
Confidence 3446899999996 699998874 3445899999999999999999999 888 99999999999999999999
Q ss_pred EeeccCceecCCCCCcc----------eeeccccCccccCCCCC---CCCCCCccccHHHHHHHHHHHHhCCCCCCcccc
Q 008012 432 VSDFGISKLLGEGDDSV----------IQTMTIATIGYMAPEFG---SEGNVSSKCDVYSYGILLLETFTRKKPTDEMFT 498 (581)
Q Consensus 432 l~Dfg~a~~~~~~~~~~----------~~~~~~~~~~y~aPE~~---~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~ 498 (581)
|+|||++.......... ......+++.|+|||++ .+..++.++|||||||++|+|++|+.||.....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 99999998765432211 11134589999999988 567789999999999999999999999975321
Q ss_pred ccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 499 GEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
. ............ ..++..+.+++.+||+.||++|||+.|++++|+++.....
T Consensus 259 ~-----~~~~~~~~~~~~-----------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 259 L-----RIVNGKYSIPPH-----------------DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ------------CCCCTT-----------------CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred H-----HhhcCcccCCcc-----------------cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 1 111111111100 0112346789999999999999999999999999987543
No 178
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.3e-42 Score=352.11 Aligned_cols=267 Identities=23% Similarity=0.289 Sum_probs=206.8
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
..++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 31 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 31 KDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 3578999999999999999999966 7899999999765 3445578899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST-PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
||+++++|.+++...+. +++..+..++.|++.||+||| +. ||+||||||+||+++.++.+||+|||++......
T Consensus 111 e~~~~~~L~~~l~~~~~-~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 185 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 185 (360)
T ss_dssp CCCTTCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH-
T ss_pred ECCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc-
Confidence 99999999999987543 788999999999999999999 64 8999999999999999999999999999755321
Q ss_pred CcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCC---------
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLP--------- 516 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~--------- 516 (581)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+.........
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE--LELMFGCQVEGDAAETPPRPRTP 260 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHH--HHHHHC-----------------
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccCCCCCCCcccC
Confidence 1234578999999999999999999999999999999999999997632221 11111000000000
Q ss_pred -----cc-ccc----cc-------hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 517 -----KI-ADA----NL-------LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 517 -----~~-~~~----~~-------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
.. .+. .. ............++..+.++|.+||+.||++|||++|+++|-
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp -------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred CCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 00 000 00 000000000112456789999999999999999999999873
No 179
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.3e-42 Score=344.97 Aligned_cols=254 Identities=24% Similarity=0.335 Sum_probs=202.6
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
..++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 4578999999999999999999976 689999999987655556788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCc
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 447 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 447 (581)
|+++++|.+++......+++..++.++.|++.||.||| +.|++||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--L 171 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--H
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--c
Confidence 99999999999876666899999999999999999999 889999999999999999999999999987543111 1
Q ss_pred ceeeccccCccccCCCCC-----CCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 448 VIQTMTIATIGYMAPEFG-----SEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 448 ~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
.......|++.|+|||++ .+..++.++||||||+++|+|++|+.||....... ......... . +...
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~-~---~~~~--- 243 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSD-P---PTLL--- 243 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSC-C---CCCS---
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccC-C---cccC---
Confidence 112334689999999987 46788999999999999999999999997642211 111111111 1 1100
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
....++..+.+++.+||+.||++|||+.|+++|
T Consensus 244 ---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 244 ---------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp ---------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ---------CccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 112345568899999999999999999999875
No 180
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=6.1e-42 Score=360.25 Aligned_cols=271 Identities=20% Similarity=0.251 Sum_probs=189.3
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeec-----CC
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCN-----TN 360 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~ 360 (581)
..++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++.. ..
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 3578999999999999999999965 7999999998653 34455788999999999999999999999844 35
Q ss_pred eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..|+||||+ +++|.+++.... .+++..++.++.||+.||+||| +.||+||||||+|||++.++.+||+|||+++.
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp CEEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred eEEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchh
Confidence 789999998 569999997654 4799999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCc-------------------------ceeeccccCccccCCCCC-CCCCCCccccHHHHHHHHHHHHh------
Q 008012 441 LGEGDDS-------------------------VIQTMTIATIGYMAPEFG-SEGNVSSKCDVYSYGILLLETFT------ 488 (581)
Q Consensus 441 ~~~~~~~-------------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~vl~el~t------ 488 (581)
....... .......||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~ 285 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence 6432211 122345789999999965 56779999999999999999999
Q ss_pred -----CCCCCCcccccc------------------ccHHHHHHhhCCCCCCccccccch-------------hhhhhhhH
Q 008012 489 -----RKKPTDEMFTGE------------------MNLKNWVKESLPHGLPKIADANLL-------------REENFFSA 532 (581)
Q Consensus 489 -----g~~Pf~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 532 (581)
|+++|.....-. ......+.........+....... ........
T Consensus 286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (458)
T 3rp9_A 286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER 365 (458)
T ss_dssp SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGG
T ss_pred cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHH
Confidence 556654421100 000011111111000000000000 00000111
Q ss_pred HHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 533 RMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 533 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...++..+.+||.+||..||++|||++|+++|
T Consensus 366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 366 FPASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 12345678899999999999999999999987
No 181
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.6e-42 Score=356.15 Aligned_cols=271 Identities=20% Similarity=0.263 Sum_probs=200.7
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecC-----C
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNT-----N 360 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~ 360 (581)
..++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++... +
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 4678999999999999999999965 7899999999753 344557889999999999999999999998766 5
Q ss_pred eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..|+||||++ ++|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 7899999996 59999997654 4799999999999999999999 89999999999999999999999999999997
Q ss_pred cCCCCCc--------------------ceeeccccCccccCCCCC-CCCCCCccccHHHHHHHHHHHHhCCCCCCccccc
Q 008012 441 LGEGDDS--------------------VIQTMTIATIGYMAPEFG-SEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTG 499 (581)
Q Consensus 441 ~~~~~~~--------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~ 499 (581)
....... .......||+.|+|||++ .+..++.++||||+||++|||++|..||.....+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~ 258 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence 6543221 123456789999999975 5667999999999999999999866555432111
Q ss_pred c--------------------------ccHHHHHHhhCCCCCCcc----ccccchh---------hhhhhhHHHHHHHHH
Q 008012 500 E--------------------------MNLKNWVKESLPHGLPKI----ADANLLR---------EENFFSARMDCLLSI 540 (581)
Q Consensus 500 ~--------------------------~~~~~~~~~~~~~~~~~~----~~~~~~~---------~~~~~~~~~~~~~~l 540 (581)
. ......+.+.......+. ....... ..........+++.+
T Consensus 259 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 338 (432)
T 3n9x_A 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG 338 (432)
T ss_dssp CCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHH
T ss_pred ccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHH
Confidence 0 000001111111100000 0000000 000001112356778
Q ss_pred HHHHHhccCcCCCCCCCHHHHHHH
Q 008012 541 FHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 541 ~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+|+.+||..||++|||++|+++|
T Consensus 339 ~dLl~~mL~~dP~~R~ta~e~L~H 362 (432)
T 3n9x_A 339 INLLESMLKFNPNKRITIDQALDH 362 (432)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTC
T ss_pred HHHHHHHhcCCcccCCCHHHHhcC
Confidence 999999999999999999999986
No 182
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.4e-41 Score=336.19 Aligned_cols=251 Identities=21% Similarity=0.301 Sum_probs=208.3
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 4567999999999999999999976 68899999987652 4456778999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
||||+++++|.+++.... .+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 93 v~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 999999999999987654 3789999999999999999999 899999999999999999999999999999876433
Q ss_pred CCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
.. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||......+ .... +.... ..++
T Consensus 169 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~-~~~~~-~~~~-------- 235 (294)
T 2rku_A 169 GE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLR-IKKNE-YSIP-------- 235 (294)
T ss_dssp TC--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHH-HHTTC-CCCC--------
T ss_pred cc--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-Hhhcc-CCCc--------
Confidence 22 2234568999999999998899999999999999999999999997642211 1111 11110 0111
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
..++..+.+++.+||+.||++|||++|++++-
T Consensus 236 ---------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 236 ---------KHINPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp ---------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ---------cccCHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 12334678999999999999999999999863
No 183
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.7e-42 Score=346.22 Aligned_cols=269 Identities=19% Similarity=0.264 Sum_probs=205.3
Q ss_pred hcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeec--------
Q 008012 290 TDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCN-------- 358 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 358 (581)
.++|++.+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46899999999999999999997 489999999986543 2223467789999999999999999999876
Q ss_pred CCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCc
Q 008012 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGIS 438 (581)
Q Consensus 359 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a 438 (581)
.+..++||||+++ +|.+.+......+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999975 888888877667899999999999999999999 899999999999999999999999999999
Q ss_pred eecCCCCC--cceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC-
Q 008012 439 KLLGEGDD--SVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG- 514 (581)
Q Consensus 439 ~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~- 514 (581)
..+..... ........||+.|+|||++.+ ..++.++|||||||++|+|++|++||...... .....+.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALISQLCGSIT 249 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCC
Confidence 87653222 122344578999999998776 56899999999999999999999999864222 2222222221111
Q ss_pred ---CCccccccchhh-------h---hhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 515 ---LPKIADANLLRE-------E---NFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 515 ---~~~~~~~~~~~~-------~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+.......... . .........++.+.+||.+||..||++|||++|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 111111000000 0 0000111124568899999999999999999999986
No 184
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.4e-42 Score=341.14 Aligned_cols=260 Identities=25% Similarity=0.387 Sum_probs=200.7
Q ss_pred hcCCCcCCeecccccccEEEEEeC--CCc--EEEEEEeccch---HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS--DGT--TVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFK 362 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 362 (581)
.++|++.+.||+|+||.||+|.+. +++ .||+|+++... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 467999999999999999999853 333 68999987642 345678899999999999999999999998765 8
Q ss_pred eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 363 ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
++||||+++++|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999999876666899999999999999999999 8899999999999999999999999999998875
Q ss_pred CCCCcc-eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcccc
Q 008012 443 EGDDSV-IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIAD 520 (581)
Q Consensus 443 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (581)
...... ......++..|+|||++.+..++.++||||||+++|+|++ |+.||...... +............
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~--- 244 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QILHKIDKEGERL--- 244 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHTSCCCC---
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----HHHHHHHccCCCC---
Confidence 433222 2234457788999999988889999999999999999999 99999764221 1111111111000
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHH
Q 008012 521 ANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDK 571 (581)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 571 (581)
.....++..+.+++.+||+.||++|||+.+++++|+++...
T Consensus 245 ----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 245 ----------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ----------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 00113456788999999999999999999999999988643
No 185
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.5e-42 Score=345.50 Aligned_cols=250 Identities=21% Similarity=0.297 Sum_probs=208.0
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc---hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ---LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|.+.+.||+|+||.||++... +++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3467999999999999999999965 6889999998765 24456778999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
||||+++++|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++......
T Consensus 119 v~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 999999999999988654 4789999999999999999999 899999999999999999999999999999876433
Q ss_pred CCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||......+ .... +.... ..++
T Consensus 195 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~-~~~~~-~~~~-------- 261 (335)
T 2owb_A 195 GE--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLR-IKKNE-YSIP-------- 261 (335)
T ss_dssp TC--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHH-HHHTC-CCCC--------
T ss_pred cc--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHH-HhcCC-CCCC--------
Confidence 22 2234568999999999988899999999999999999999999997632211 1111 11111 1111
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..++..+.++|.+||+.||++|||++|++++
T Consensus 262 ---------~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 262 ---------KHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp ---------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ---------ccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1233467899999999999999999999986
No 186
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=6.9e-42 Score=362.34 Aligned_cols=251 Identities=24% Similarity=0.315 Sum_probs=205.1
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
..++|++.+.||+|+||.||+|... +++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 4577999999999999999999965 79999999986542 22346788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec---CCCcEEEeeccCceecC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLD---ENMVAHVSDFGISKLLG 442 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~---~~~~~kl~Dfg~a~~~~ 442 (581)
|||+++++|.+++..... +++..+..++.||+.||.||| +.||+||||||+||+++ .++.+||+|||++....
T Consensus 100 ~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 175 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRKR-FSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (486)
T ss_dssp ECCCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred EEcCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence 999999999999876543 789999999999999999999 89999999999999995 45689999999998664
Q ss_pred CCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhh-CCCCCCccccc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES-LPHGLPKIADA 521 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 521 (581)
... ......||+.|+|||++.+ .++.++||||+||++|+|++|++||...... .....+... .....
T Consensus 176 ~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~~~------ 243 (486)
T 3mwu_A 176 QNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYAFDL------ 243 (486)
T ss_dssp CC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCSCS------
T ss_pred CCC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCCCC------
Confidence 332 2334579999999999876 5999999999999999999999999763221 112222211 11111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+....+++.+.++|.+||..||++|||+.|+++|
T Consensus 244 ---------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 244 ---------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ---------GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ---------cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1122345678899999999999999999999987
No 187
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.5e-41 Score=337.58 Aligned_cols=250 Identities=25% Similarity=0.367 Sum_probs=208.2
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEe
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 367 (581)
.+.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 456899999999999999999964 78999999997553 3345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCc
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS 447 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 447 (581)
|+++++|.+++... .+++..++.++.|++.||.||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 99999999999753 4789999999999999999999 8999999999999999999999999999998764332
Q ss_pred ceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhhh
Q 008012 448 VIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREE 527 (581)
Q Consensus 448 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (581)
.......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... .....+.......++
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~----------- 240 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPKNNPPTLE----------- 240 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCCCCCC-----------
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhcCCCCCCc-----------
Confidence 1223456899999999999999999999999999999999999999763221 122222222111111
Q ss_pred hhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 528 NFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 528 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
..++..+.+++.+||+.||++|||+.|++++.
T Consensus 241 ------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 241 ------GNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp ------SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ------cccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 12345688999999999999999999999874
No 188
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.5e-42 Score=346.45 Aligned_cols=263 Identities=20% Similarity=0.270 Sum_probs=203.6
Q ss_pred hhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchHHHHHHHHHHHHHHHhcC-CCccceEeeeeec--CCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILSSCCN--TNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~--~~~~~l 364 (581)
..++|++.+.||+|+||.||+|.. .+++.||+|+++.... +.+.+|++++++++ ||||+++++++.+ ....++
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~l 110 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK---KKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 110 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCH---HHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEE
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccch---HHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEE
Confidence 347899999999999999999995 4799999999986543 46789999999996 9999999999987 667899
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC-cEEEeeccCceecCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM-VAHVSDFGISKLLGE 443 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~-~~kl~Dfg~a~~~~~ 443 (581)
||||+++++|.+++.. +++..+..++.||+.||+||| +.||+||||||+||+++.++ .+||+|||++.....
T Consensus 111 v~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 111 VFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999998854 688899999999999999999 89999999999999999776 899999999987654
Q ss_pred CCCcceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHH------------hh
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK------------ES 510 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~------------~~ 510 (581)
... .....++..|+|||++.+ ..++.++|||||||++|+|++|+.||.........+..... ..
T Consensus 184 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 184 GQE---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TCC---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCc---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 332 234578999999998876 67899999999999999999999999653332222222111 10
Q ss_pred CCCCCCcc---cc---ccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 511 LPHGLPKI---AD---ANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 511 ~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.....+.. .. ...............+++.+.++|.+||+.||++|||++|+++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000000 00 00000000011122356778999999999999999999999986
No 189
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-42 Score=347.56 Aligned_cols=263 Identities=22% Similarity=0.275 Sum_probs=198.7
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCC-----
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN----- 360 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 360 (581)
..++|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 4578999999999999999999964 7999999998543 3445567889999999999999999999987653
Q ss_pred -eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCce
Q 008012 361 -FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK 439 (581)
Q Consensus 361 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~ 439 (581)
..++||||+ +++|.+++... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred ceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 469999999 78999999874 3789999999999999999999 8999999999999999999999999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+...+. .........
T Consensus 177 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~-~~g~~~~~~ 249 (367)
T 1cm8_A 177 QADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMK-VTGTPPAEF 249 (367)
T ss_dssp ECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH-HHCCCCHHH
T ss_pred ccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-hcCCCCHHH
Confidence 76432 234568999999998776 68999999999999999999999999763221 11222211 111110000
Q ss_pred ccc----c---ch------hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 519 ADA----N---LL------REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 519 ~~~----~---~~------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
... . .. ...........+++.+.+|+.+||..||++|||++|+++|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000 0 00 0000001112345678899999999999999999999986
No 190
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.7e-42 Score=340.70 Aligned_cols=253 Identities=24% Similarity=0.325 Sum_probs=203.3
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEE
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
...++|++.+.||+|+||.||+|... +|+.||+|++..... .+.+.+|+.++++++||||+++++++...+..++||
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSC--CHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHH--HHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 34678999999999999999999965 689999999976532 356888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDD 446 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~ 446 (581)
||+++++|.+++......+++..++.++.|++.||.||| +.|++|+||||+||+++.++.+||+|||.+........
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 999999999999866666899999999999999999999 89999999999999999999999999999987643221
Q ss_pred cceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhh
Q 008012 447 SVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLRE 526 (581)
Q Consensus 447 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (581)
......|++.|+|||++.+..++.++||||||+++|+|++|+.||....... ....+........
T Consensus 181 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~----------- 245 (314)
T 3com_A 181 --KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNPPPTF----------- 245 (314)
T ss_dssp --CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCC-----------
T ss_pred --ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCCccc-----------
Confidence 2234568999999999999899999999999999999999999997632211 1111111111111
Q ss_pred hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 527 ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 527 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..+..++..+.+++.+||..||++|||+.+++++
T Consensus 246 ----~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 246 ----RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp ----SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0111234568899999999999999999999885
No 191
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.6e-42 Score=342.25 Aligned_cols=263 Identities=22% Similarity=0.347 Sum_probs=203.9
Q ss_pred cchhhhHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcC--CCccceEeee
Q 008012 280 RTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVR--HRNLIKILSS 355 (581)
Q Consensus 280 ~~~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~--h~~iv~~~~~ 355 (581)
.+.+..+....++|++.+.||+|+||.||+|...+++.||+|++... .....+.+.+|++++++++ ||||++++++
T Consensus 17 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~ 96 (313)
T 3cek_A 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY 96 (313)
T ss_dssp ---CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEE
T ss_pred CCCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEE
Confidence 34455566677889999999999999999999888999999998654 3455678899999999996 5999999999
Q ss_pred eecCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeec
Q 008012 356 CCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDF 435 (581)
Q Consensus 356 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Df 435 (581)
+.+.+..++||| +.+++|.+++.... .+++..++.++.|+++||.||| +.||+||||||+||++++ +.+||+||
T Consensus 97 ~~~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Df 170 (313)
T 3cek_A 97 EITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDF 170 (313)
T ss_dssp EECSSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCC
T ss_pred eecCCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeec
Confidence 999999999999 55789999998765 4788999999999999999999 889999999999999964 89999999
Q ss_pred cCceecCCCCCcceeeccccCccccCCCCCCC-----------CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHH
Q 008012 436 GISKLLGEGDDSVIQTMTIATIGYMAPEFGSE-----------GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLK 504 (581)
Q Consensus 436 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~ 504 (581)
|++................|++.|+|||++.+ ..++.++||||||+++|+|++|+.||...........
T Consensus 171 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 250 (313)
T 3cek_A 171 GIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH 250 (313)
T ss_dssp SSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHH
T ss_pred cccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence 99987654433333345578999999998765 4788899999999999999999999976433222222
Q ss_pred HHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 505 NWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
...........+. .++..+.+++.+||+.||++|||+.|++++-
T Consensus 251 ~~~~~~~~~~~~~-----------------~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 251 AIIDPNHEIEFPD-----------------IPEKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp HHHCTTSCCCCCC-----------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred HHHhcccccCCcc-----------------cchHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 2222111111111 1234678999999999999999999999864
No 192
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=9.1e-43 Score=372.29 Aligned_cols=262 Identities=26% Similarity=0.424 Sum_probs=213.8
Q ss_pred hhHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 284 LDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 284 ~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
..++...++|++.+.||+|+||.||+|.++++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..+
T Consensus 260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~ 337 (535)
T 2h8h_A 260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 337 (535)
T ss_dssp TCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred cceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence 345566788999999999999999999988778899999976532 23578999999999999999999999876 6789
Q ss_pred EEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 364 LVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
+||||+++|+|.+++... +..+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||++....
T Consensus 338 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp EEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred EeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 999999999999999853 345789999999999999999999 8999999999999999999999999999998653
Q ss_pred CCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.......
T Consensus 415 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~~~------- 484 (535)
T 2h8h_A 415 DNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERGYRMP------- 484 (535)
T ss_dssp CHH-HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHHHHHHTTCCCC-------
T ss_pred CCc-eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCC-------
Confidence 211 111223346788999999988899999999999999999999 99999764221 1222222221111
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRD 570 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 570 (581)
.+..++..+.++|.+||+.||++|||+++|++.|+.+..
T Consensus 485 ----------~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 485 ----------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp ----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred ----------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 112345678899999999999999999999999998754
No 193
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2e-41 Score=358.50 Aligned_cols=255 Identities=23% Similarity=0.310 Sum_probs=208.0
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH---HHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|+.+ +|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..|+
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 3478999999999999999999975 799999999976532 224578899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceec
Q 008012 365 VLEFMPNGSLDKWLYSH---NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
||||++||+|.+++... ...+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 99999999999999864 345789999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 442 GEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 442 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+......... .
T Consensus 340 ~~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~~~~~~~~~i~~~~~-~---- 411 (543)
T 3c4z_A 340 KAGQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAV-T---- 411 (543)
T ss_dssp CTTCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-CCHHHHHHHHHHCCC-C----
T ss_pred cCCCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-hhHHHHHHHHhhccc-C----
Confidence 54332 123457999999999999999999999999999999999999999764221 112222221111100 0
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCH-----HHHHHH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYM-----KDAATK 564 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~ 564 (581)
.+..++..+.++|.+||..||++||++ +++++|
T Consensus 412 ----------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 412 ----------YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp ----------CCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred ----------CCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 011234568899999999999999965 677654
No 194
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.9e-42 Score=349.68 Aligned_cols=266 Identities=22% Similarity=0.282 Sum_probs=208.4
Q ss_pred hhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHH-----------------HHHHHHHHHHHHhcCCCccce
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQA-----------------FRSFNSECEVLRNVRHRNLIK 351 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~~iv~ 351 (581)
..++|++.+.||+|+||.||+|.. +++.||+|++....... .+.+.+|++++++++||||++
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 357899999999999999999999 89999999997653221 167889999999999999999
Q ss_pred EeeeeecCCeeeEEEeccCCCCHHHH------HhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCceecCCCCCCeE
Q 008012 352 ILSSCCNTNFKALVLEFMPNGSLDKW------LYSH-NYFQDIPDRLNIMIDVALALEYLHHGHS-TPVVHCDLKPSNIL 423 (581)
Q Consensus 352 ~~~~~~~~~~~~lv~e~~~~~~L~~~------l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~-~~i~H~dikp~Nil 423 (581)
+++++.+.+..++||||+++++|.++ +... ...+++..++.++.|++.||+||| + .||+||||||+||+
T Consensus 108 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 108 CEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNIL 184 (348)
T ss_dssp CSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEE
T ss_pred EEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEE
Confidence 99999999999999999999999998 5542 456899999999999999999999 6 99999999999999
Q ss_pred ecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCC-CCCc-cccHHHHHHHHHHHHhCCCCCCccccccc
Q 008012 424 LDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG-NVSS-KCDVYSYGILLLETFTRKKPTDEMFTGEM 501 (581)
Q Consensus 424 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~Dv~slG~vl~el~tg~~Pf~~~~~~~~ 501 (581)
++.++.+||+|||.+...... ......++..|+|||++.+. .++. ++||||||+++|||++|+.||...... .
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~ 259 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-V 259 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-H
T ss_pred EcCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-H
Confidence 999999999999999876432 23456789999999998887 6666 999999999999999999999764332 1
Q ss_pred cHHHHHHhhCCCCCCccccccch--hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 502 NLKNWVKESLPHGLPKIADANLL--REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.....+..... ..+........ ...........++..+.+++.+||+.||++|||+.|+++|
T Consensus 260 ~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 260 ELFNNIRTKNI-EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHHHTSCCC-CCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhccCc-CCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 12222211111 11110000000 0000011113456678999999999999999999999985
No 195
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.9e-41 Score=334.20 Aligned_cols=245 Identities=19% Similarity=0.275 Sum_probs=200.7
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|... +++.||+|++... .......+.+|+..+.++ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 4577999999999999999999976 7999999998754 233456788999999999 99999999999999999999
Q ss_pred EEeccCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC--------------
Q 008012 365 VLEFMPNGSLDKWLYSH---NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDEN-------------- 427 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~-------------- 427 (581)
||||+++++|.+++... ...+++..++.++.||+.||+||| +.||+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999999999854 245799999999999999999999 8999999999999999844
Q ss_pred -----CcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccc
Q 008012 428 -----MVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM 501 (581)
Q Consensus 428 -----~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~ 501 (581)
..+||+|||.+....... ...|++.|+|||++.+. .++.++|||||||++|+|++|.+|+... .
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~ 235 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----D 235 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----H
T ss_pred ccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----h
Confidence 479999999998764322 23589999999988765 6678999999999999999999876432 1
Q ss_pred cHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 502 NLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.... +.......++. .+++.+.+++.+||+.||++|||+.|+++|
T Consensus 236 ~~~~-~~~~~~~~~~~-----------------~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 236 QWHE-IRQGRLPRIPQ-----------------VLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHH-HHTTCCCCCSS-----------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHH-HHcCCCCCCCc-----------------ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 1112 22111111111 234568899999999999999999999876
No 196
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.9e-41 Score=330.72 Aligned_cols=249 Identities=26% Similarity=0.389 Sum_probs=198.7
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH---HHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 4578999999999999999999976 799999999976532 234578899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
||||+++++|.+++..... +++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+......
T Consensus 89 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEECCCSCBHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EEeccCCCcHHHHHhccCC-CCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999999987644 788999999999999999999 889999999999999999999999999999876432
Q ss_pred CCcceeeccccCccccCCCCCCCCCC-CccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccc
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNV-SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANL 523 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (581)
. ......+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||..... ......+..... ..+
T Consensus 165 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~-~~~------- 231 (276)
T 2h6d_A 165 E---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKKIRGGVF-YIP------- 231 (276)
T ss_dssp ---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCC-CCC-------
T ss_pred c---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHhhcCcc-cCc-------
Confidence 2 1234468999999999887765 6899999999999999999999976321 111222221111 011
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 524 LREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 524 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..++..+.+++.+||+.||++|||+.|++++
T Consensus 232 ----------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 232 ----------EYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----------hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1234567899999999999999999999986
No 197
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.8e-41 Score=360.58 Aligned_cols=253 Identities=23% Similarity=0.314 Sum_probs=204.9
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH-------------HHHHHHHHHHHHHHhcCCCccceEe
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE-------------QAFRSFNSECEVLRNVRHRNLIKIL 353 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~iv~~~ 353 (581)
...++|++++.||+|+||.||+|..+ +++.||+|++..... ...+.+.+|+.++++++||||++++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 35678999999999999999999965 789999999875431 2245788999999999999999999
Q ss_pred eeeecCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC---cE
Q 008012 354 SSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM---VA 430 (581)
Q Consensus 354 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~---~~ 430 (581)
+++.+.+..++||||+++|+|.+++..... +++..++.++.||+.||+||| +.||+||||||+||+++.++ .+
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccE
Confidence 999999999999999999999999986543 799999999999999999999 89999999999999998775 69
Q ss_pred EEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 008012 431 HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510 (581)
Q Consensus 431 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~ 510 (581)
||+|||++....... ......||+.|+|||++.+ .++.++||||+||++|+|++|.+||...... .....+...
T Consensus 189 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~ 262 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIKKVEKG 262 (504)
T ss_dssp EECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHC
T ss_pred EEEECCCCEEcCCCC---ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcC
Confidence 999999998775432 2334579999999998774 6999999999999999999999999763221 122222211
Q ss_pred CCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
... . .......+++.+.++|.+||..||++|||++|+++|
T Consensus 263 ~~~-~-------------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 263 KYY-F-------------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp CCC-C-------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCC-C-------------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 100 0 011223456678999999999999999999999986
No 198
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.7e-41 Score=345.23 Aligned_cols=264 Identities=20% Similarity=0.195 Sum_probs=196.6
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCC-----
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN----- 360 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----- 360 (581)
..++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 3578999999999999999999965 7899999998753 3445567889999999999999999999987654
Q ss_pred -eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCce
Q 008012 361 -FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK 439 (581)
Q Consensus 361 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~ 439 (581)
..++||||+++ +|.+++.. .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.
T Consensus 103 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 103 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp CEEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred cceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 78999999975 78888863 3788999999999999999999 8999999999999999999999999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccc
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIA 519 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (581)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ..+.. +........+...
T Consensus 176 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~-i~~~~~~~~~~~~ 250 (371)
T 2xrw_A 176 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNK-VIEQLGTPCPEFM 250 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH-HHC-CCCCCHHHH
T ss_pred cccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH-HHHHhCCCCHHHH
Confidence 654321 233457899999999999999999999999999999999999999763211 11111 1111111111000
Q ss_pred cc------------------cchhh------hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 520 DA------------------NLLRE------ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 520 ~~------------------~~~~~------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.. .+... ..........+..+.+|+.+||..||++|||++|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 251 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00 00000 00011223456789999999999999999999999987
No 199
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.8e-42 Score=344.11 Aligned_cols=262 Identities=20% Similarity=0.237 Sum_probs=208.3
Q ss_pred chhhhHHHhhcCCCcC-CeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhc-CCCccceEeee
Q 008012 281 TSYLDLERATDGFNEC-NLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNV-RHRNLIKILSS 355 (581)
Q Consensus 281 ~~~~~~~~~~~~y~~~-~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~~iv~~~~~ 355 (581)
..+...+...+.|.+. +.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++++ .||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3455566777888887 88999999999999966 79999999987643 22245788999999999 57999999999
Q ss_pred eecCCeeeEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCcEE
Q 008012 356 CCNTNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE---NMVAH 431 (581)
Q Consensus 356 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~---~~~~k 431 (581)
+.+.+..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +.||+||||||+||+++. ++.+|
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEE
Confidence 99999999999999999999998643 355799999999999999999999 899999999999999987 78999
Q ss_pred EeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 008012 432 VSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESL 511 (581)
Q Consensus 432 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 511 (581)
|+|||++........ .....|++.|+|||++.+..++.++||||||+++|+|++|+.||....... ....+....
T Consensus 175 L~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~i~~~~ 249 (327)
T 3lm5_A 175 IVDFGMSRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE--TYLNISQVN 249 (327)
T ss_dssp ECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHTC
T ss_pred EeeCccccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH--HHHHHHhcc
Confidence 999999987643322 234578999999999999999999999999999999999999997632211 111111111
Q ss_pred CCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 512 PHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
... +. .....+++.+.++|.+||..||++|||++|++++
T Consensus 250 ~~~-~~-------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 250 VDY-SE-------------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp CCC-CT-------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ccc-Cc-------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 111 10 0111345568899999999999999999999886
No 200
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.1e-41 Score=347.23 Aligned_cols=277 Identities=21% Similarity=0.244 Sum_probs=206.5
Q ss_pred cchhhhHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccc-----------hHHHHHHHHHHHHHHHhcCCCc
Q 008012 280 RTSYLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQ-----------LEQAFRSFNSECEVLRNVRHRN 348 (581)
Q Consensus 280 ~~~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~~e~~~l~~l~h~~ 348 (581)
+....++....++|++.+.||+|+||.||+|...+|+.||||++... .....+.+.+|++++++++|||
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 34566788899999999999999999999999888999999998543 2233478899999999999999
Q ss_pred cceEeeeeec-----CCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeE
Q 008012 349 LIKILSSCCN-----TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNIL 423 (581)
Q Consensus 349 iv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nil 423 (581)
|+++++++.. ....++||||++ |+|.+++......+++..++.++.||+.||+||| +.||+||||||+||+
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNIL 166 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEE
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEE
Confidence 9999999843 346899999997 5999999877777899999999999999999999 889999999999999
Q ss_pred ecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCcccccccc
Q 008012 424 LDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMN 502 (581)
Q Consensus 424 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~ 502 (581)
++.++.+||+|||++....... ......+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...... ..
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~ 242 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQ 242 (362)
T ss_dssp ECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HH
T ss_pred EcCCCCEEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HH
Confidence 9999999999999998543222 2344578999999998776 67899999999999999999999999764221 11
Q ss_pred HHHHHHhhCCCCCCccc-----------cccch--hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 503 LKNWVKESLPHGLPKIA-----------DANLL--REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 503 ~~~~~~~~~~~~~~~~~-----------~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
....+............ ..... ...........+++.+.+++.+||+.||++|||+.|+++|
T Consensus 243 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 243 LNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 22221111111000000 00000 0000011122345678899999999999999999999986
No 201
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=334.06 Aligned_cols=252 Identities=22% Similarity=0.295 Sum_probs=201.5
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch----HHHHHHHHHHHHHHHhcCCCccceEeeeee--cCCe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL----EQAFRSFNSECEVLRNVRHRNLIKILSSCC--NTNF 361 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--~~~~ 361 (581)
..++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++. +.+.
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 4578999999999999999999964 78999999997653 234567899999999999999999999984 4568
Q ss_pred eeEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 362 KALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
.++||||++++ |.+++... ...+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||.+..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999876 77777653 445799999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCcceeeccccCccccCCCCCCCCC--CCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 441 LGEGDDSVIQTMTIATIGYMAPEFGSEGN--VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
..............|++.|+|||++.+.. ++.++||||||+++|+|++|+.||..... ......+..... .++
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~~~~-~~~-- 233 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--YKLFENIGKGSY-AIP-- 233 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHCCC-CCC--
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHHhcCCC-CCC--
Confidence 75443333444567899999999887644 47799999999999999999999976321 111111111110 011
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 519 ADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..++..+.+++.+||+.||++|||++|++++
T Consensus 234 ---------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 234 ---------------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ---------------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ---------------CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1234568899999999999999999999987
No 202
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.2e-41 Score=369.54 Aligned_cols=252 Identities=27% Similarity=0.410 Sum_probs=202.6
Q ss_pred CeecccccccEEEEEeC---CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEEeccCC
Q 008012 297 NLLGSGGFGSVYKGILS---DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVLEFMPN 371 (581)
Q Consensus 297 ~~lg~G~~~~v~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 371 (581)
+.||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999643 56789999997653 2335679999999999999999999999964 457899999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCc-cee
Q 008012 372 GSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDS-VIQ 450 (581)
Q Consensus 372 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~ 450 (581)
|+|.+++.... .+++..++.++.||+.||+||| ++||+||||||+|||++.++.+||+|||+++.+...... ...
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999998654 4789999999999999999999 899999999999999999999999999999876543322 122
Q ss_pred eccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCccccccchhhhhh
Q 008012 451 TMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENF 529 (581)
Q Consensus 451 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (581)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+........+
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~~~~p------------- 594 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGERMGCP------------- 594 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCCCCC-------------
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCCC-------------
Confidence 33456788999999999999999999999999999998 99999764222 222333222211111
Q ss_pred hhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 530 FSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 530 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
..+++++.++|.+||+.||++|||+++|++.|+++..+.
T Consensus 595 ----~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 595 ----AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp ----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 234567889999999999999999999999999987654
No 203
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2e-42 Score=343.84 Aligned_cols=265 Identities=24% Similarity=0.338 Sum_probs=189.1
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
.....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..+
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 3455689999999999999999999954 78999999987653 334567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhh-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeecc
Q 008012 364 LVLEFMPNGSLDKWLYS-------HNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFG 436 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~-------~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg 436 (581)
+||||+++++|.+++.. ....+++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEecc
Confidence 99999999999999974 2345789999999999999999999 8899999999999999999999999999
Q ss_pred CceecCCCCC---cceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 008012 437 ISKLLGEGDD---SVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLP 512 (581)
Q Consensus 437 ~a~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 512 (581)
.+........ ........|++.|+|||++.+ ..++.++||||||+++|+|++|+.||........ ... ......
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~-~~~~~~ 244 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LML-TLQNDP 244 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHH-HHTSSC
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-HHH-HhccCC
Confidence 9976643221 112234568999999998765 5689999999999999999999999976432211 111 111111
Q ss_pred CCCCc-cccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 513 HGLPK-IADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 513 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..... ..+... ...++..+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~~~~~~~~~---------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 245 PSLETGVQDKEM---------LKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp CCTTC-----CC---------CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred Cccccccccchh---------hhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 11111 111111 11234568899999999999999999999985
No 204
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.1e-42 Score=346.14 Aligned_cols=255 Identities=25% Similarity=0.323 Sum_probs=202.7
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccch-HHHHHHHHHHHHH-HHhcCCCccceEeeeeecCCee
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQL-EQAFRSFNSECEV-LRNVRHRNLIKILSSCCNTNFK 362 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~~iv~~~~~~~~~~~~ 362 (581)
.+...++|++.+.||+|+||.||+|.. .+|+.||||+++... ......+..|..+ ++.++||||+++++++.+.+..
T Consensus 46 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 125 (340)
T 3an0_A 46 FEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 125 (340)
T ss_dssp CCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred eEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence 345567899999999999999999996 479999999997642 2333455556665 6777999999999999999999
Q ss_pred eEEEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeEecCCCcEEEeeccCc
Q 008012 363 ALVLEFMPNGSLDKWLYS---HNYFQDIPDRLNIMIDVALALEYLHHGHST-PVVHCDLKPSNILLDENMVAHVSDFGIS 438 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dikp~Nill~~~~~~kl~Dfg~a 438 (581)
++||||+++ +|.+++.. ....+++..++.++.||+.||+||| +. ||+||||||+||+++.++.+||+|||++
T Consensus 126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 201 (340)
T 3an0_A 126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGIS 201 (340)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHH
T ss_pred EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCc
Confidence 999999976 99998874 4556899999999999999999999 65 9999999999999999999999999999
Q ss_pred eecCCCCCcceeeccccCccccCCCCCC----CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC
Q 008012 439 KLLGEGDDSVIQTMTIATIGYMAPEFGS----EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG 514 (581)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 514 (581)
...... .......|++.|+|||++. ...++.++|||||||++|||++|+.||.........+...+....+.
T Consensus 202 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~- 277 (340)
T 3an0_A 202 GYLVDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ- 277 (340)
T ss_dssp HHHSCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC-
T ss_pred eecccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCC-
Confidence 876422 1223347899999999854 45789999999999999999999999976432222222222211111
Q ss_pred CCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 515 LPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.. ...++.++.++|.+||..||++|||+.|++++
T Consensus 278 ---~~-------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 278 ---LP-------------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ---CC-------------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---CC-------------cccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 00 01245578899999999999999999999985
No 205
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.2e-41 Score=361.08 Aligned_cols=252 Identities=23% Similarity=0.283 Sum_probs=201.7
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
..++|++++.||+|+||.||+|..+ +++.||+|++.... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4567999999999999999999975 78999999997653 22345788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCcEEEeeccCceecC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE---NMVAHVSDFGISKLLG 442 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~---~~~~kl~Dfg~a~~~~ 442 (581)
|||+++|+|.+++..... +++..++.++.||+.||+||| +.||+||||||+||+++. ++.+||+|||++....
T Consensus 115 ~e~~~~g~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 115 MECYKGGELFDEIIHRMK-FNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp EECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred EecCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 999999999998876543 788999999999999999999 899999999999999975 4559999999998765
Q ss_pred CCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
... ......||+.|+|||++. ..++.++||||+||++|+|++|++||...... .....+....... + .
T Consensus 191 ~~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~-~---~-- 258 (494)
T 3lij_A 191 NQK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKVEKGKYTF-D---S-- 258 (494)
T ss_dssp TTB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCC-C---S--
T ss_pred CCc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCC-C---c--
Confidence 332 233457999999999876 46999999999999999999999999764221 1222222211110 0 0
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+....+++.+.++|.+||..||++|||+.|+++|
T Consensus 259 --------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 259 --------PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp --------GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred --------hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 1112345678899999999999999999999987
No 206
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.3e-41 Score=340.99 Aligned_cols=254 Identities=26% Similarity=0.348 Sum_probs=201.7
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--------HHHHHHHHHHHHHHHhcCCCccceEeeeeec
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--------EQAFRSFNSECEVLRNVRHRNLIKILSSCCN 358 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 358 (581)
...++|++.+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 34578999999999999999999965 68999999986542 1223457899999999999999999999876
Q ss_pred CCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---EEEeec
Q 008012 359 TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV---AHVSDF 435 (581)
Q Consensus 359 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~---~kl~Df 435 (581)
.+ .++||||+++++|.+++.... .+++..++.++.||+.||+||| +.||+||||||+||+++.++. +||+||
T Consensus 87 ~~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 87 ED-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp SS-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred Cc-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 65 899999999999999987654 4789999999999999999999 899999999999999987654 999999
Q ss_pred cCceecCCCCCcceeeccccCccccCCCCC---CCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 008012 436 GISKLLGEGDDSVIQTMTIATIGYMAPEFG---SEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLP 512 (581)
Q Consensus 436 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~---~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 512 (581)
|++....... ......|++.|+|||++ ....++.++|||||||++|+|++|+.||...... ..+...+.....
T Consensus 162 g~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~ 237 (322)
T 2ycf_A 162 GHSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQITSGKY 237 (322)
T ss_dssp TTCEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-SCHHHHHHHTCC
T ss_pred ccceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-HHHHHHHHhCcc
Confidence 9998764321 12345689999999986 3567899999999999999999999999764332 233333332221
Q ss_pred CCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 513 HGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...+ .....++..+.+++.+||..||++|||+.|++++
T Consensus 238 ~~~~--------------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 238 NFIP--------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp CCCH--------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ccCc--------------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 1111 1112345678899999999999999999999975
No 207
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1e-42 Score=356.68 Aligned_cols=251 Identities=15% Similarity=0.176 Sum_probs=195.7
Q ss_pred HhhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccc---hHHHHHHHHHHHH---HHHhcCCCccceEe-------
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQ---LEQAFRSFNSECE---VLRNVRHRNLIKIL------- 353 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~e~~---~l~~l~h~~iv~~~------- 353 (581)
...++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+. .+++++||||++++
T Consensus 70 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~ 149 (377)
T 3byv_A 70 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149 (377)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred CCCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence 3457899999999999999999995 47999999999743 3345577889994 55555899999998
Q ss_pred eeeecCC-----------------eeeEEEeccCCCCHHHHHhhCCCCCC------HHHHHHHHHHHHHHHHHHhcCCCC
Q 008012 354 SSCCNTN-----------------FKALVLEFMPNGSLDKWLYSHNYFQD------IPDRLNIMIDVALALEYLHHGHST 410 (581)
Q Consensus 354 ~~~~~~~-----------------~~~lv~e~~~~~~L~~~l~~~~~~~~------~~~~~~i~~~i~~~L~~LH~~~~~ 410 (581)
+++.+.+ ..++||||+ +|+|.+++...+.... +..++.++.||+.||+||| +.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~ 225 (377)
T 3byv_A 150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HY 225 (377)
T ss_dssp EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HT
T ss_pred hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hC
Confidence 5555443 278999999 6799999986533222 5788899999999999999 89
Q ss_pred CceecCCCCCCeEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCC-----------CCCccccHHHH
Q 008012 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG-----------NVSSKCDVYSY 479 (581)
Q Consensus 411 ~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~Dv~sl 479 (581)
||+||||||+|||++.++.+||+|||++...+. ......| +.|+|||++.+. .++.++|||||
T Consensus 226 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSl 299 (377)
T 3byv_A 226 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWAL 299 (377)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHH
T ss_pred CeecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHH
Confidence 999999999999999999999999999986422 2334567 999999998877 89999999999
Q ss_pred HHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHH
Q 008012 480 GILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMK 559 (581)
Q Consensus 480 G~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 559 (581)
||++|||++|+.||........ ...+.. ....+++.+.++|.+||+.||++|||+.
T Consensus 300 G~il~elltg~~Pf~~~~~~~~-------------~~~~~~-----------~~~~~~~~~~~li~~~L~~dp~~Rpt~~ 355 (377)
T 3byv_A 300 GLVIYWIWCADLPITKDAALGG-------------SEWIFR-----------SCKNIPQPVRALLEGFLRYPKEDRLLPL 355 (377)
T ss_dssp HHHHHHHHHSSCCC------CC-------------SGGGGS-----------SCCCCCHHHHHHHHHHTCSSGGGCCCHH
T ss_pred HHHHHHHHHCCCCCcccccccc-------------hhhhhh-----------hccCCCHHHHHHHHHHcCCCchhCCCHH
Confidence 9999999999999975322111 000000 0013355788999999999999999999
Q ss_pred HHHHH--HHHhHHHH
Q 008012 560 DAATK--LKKIRDKF 572 (581)
Q Consensus 560 evl~~--L~~~~~~~ 572 (581)
|++++ ++++.+..
T Consensus 356 e~l~hp~f~~~~~~~ 370 (377)
T 3byv_A 356 QAMETPEYEQLRTEL 370 (377)
T ss_dssp HHHTSHHHHHHHHHH
T ss_pred HHhhChHHHHHHHHH
Confidence 99974 55555544
No 208
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.5e-42 Score=353.05 Aligned_cols=265 Identities=11% Similarity=0.072 Sum_probs=191.1
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhc--CCCccceEe-------ee
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNV--RHRNLIKIL-------SS 355 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l--~h~~iv~~~-------~~ 355 (581)
...+|.+.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+.+++.+ +||||++++ ++
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 60 GERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp CEEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEE
T ss_pred CceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehh
Confidence 3456899999999999999999965 78999999998743 34456778886555555 699988755 34
Q ss_pred eecC-----------------CeeeEEEeccCCCCHHHHHhhCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCc
Q 008012 356 CCNT-----------------NFKALVLEFMPNGSLDKWLYSHNYFQDIPDR------LNIMIDVALALEYLHHGHSTPV 412 (581)
Q Consensus 356 ~~~~-----------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~------~~i~~~i~~~L~~LH~~~~~~i 412 (581)
+... ...++||||++ |+|.+++...+...++..+ ..++.||+.||+||| ++||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~i 215 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGL 215 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCC
Confidence 4322 34799999998 7999999875444566666 788899999999999 8999
Q ss_pred eecCCCCCCeEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCC--CCCCccccHHHHHHHHHHHHhCC
Q 008012 413 VHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSE--GNVSSKCDVYSYGILLLETFTRK 490 (581)
Q Consensus 413 ~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~vl~el~tg~ 490 (581)
+||||||+|||++.++.+||+|||++...+. ......+++.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999987632 1224567799999999987 68999999999999999999999
Q ss_pred CCCCccccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH--HHHh
Q 008012 491 KPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK--LKKI 568 (581)
Q Consensus 491 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L~~~ 568 (581)
.||............ ........... ...+....+++.+.++|.+||+.||++|||+.|+++| ++++
T Consensus 291 ~Pf~~~~~~~~~~~~------~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 359 (371)
T 3q60_A 291 LPFGLVTPGIKGSWK------RPSLRVPGTDS-----LAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL 359 (371)
T ss_dssp CSTTBCCTTCTTCCC------BCCTTSCCCCS-----CCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred CCCCCcCcccccchh------hhhhhhccccc-----cchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence 999875332111000 00000000000 0011112456678899999999999999999999875 4555
Q ss_pred HHHHH
Q 008012 569 RDKFL 573 (581)
Q Consensus 569 ~~~~~ 573 (581)
.....
T Consensus 360 ~~~~~ 364 (371)
T 3q60_A 360 QNEIS 364 (371)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 44433
No 209
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.2e-41 Score=333.46 Aligned_cols=254 Identities=23% Similarity=0.305 Sum_probs=206.7
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---------HHHHHHHHHHHHHHHhcC-CCccceEeeee
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---------EQAFRSFNSECEVLRNVR-HRNLIKILSSC 356 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~ 356 (581)
...++|++.+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 45678999999999999999999975 78999999986432 234567889999999995 99999999999
Q ss_pred ecCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeecc
Q 008012 357 CNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFG 436 (581)
Q Consensus 357 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg 436 (581)
.+.+..++||||+++++|.+++.... .+++..++.++.||+.||+||| +.|++||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999998654 4789999999999999999999 8999999999999999999999999999
Q ss_pred CceecCCCCCcceeeccccCccccCCCCCC------CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 008012 437 ISKLLGEGDDSVIQTMTIATIGYMAPEFGS------EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510 (581)
Q Consensus 437 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~ 510 (581)
.+........ .....+++.|+|||++. ...++.++||||||+++|+|++|+.||..... ......+...
T Consensus 170 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~ 244 (298)
T 1phk_A 170 FSCQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLMLRMIMSG 244 (298)
T ss_dssp TCEECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT
T ss_pred chhhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--HHHHHHHhcC
Confidence 9987654322 23456899999999774 55788999999999999999999999976321 1111212211
Q ss_pred CCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.... + . +....++..+.+++.+||+.||++|||+.|++++
T Consensus 245 ~~~~-~---~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 245 NYQF-G---S----------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp CCCC-C---T----------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred Cccc-C---c----------ccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 1110 0 0 0112345678899999999999999999999874
No 210
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=4.9e-42 Score=363.55 Aligned_cols=252 Identities=24% Similarity=0.337 Sum_probs=207.3
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4567999999999999999999976 89999999986542 2334678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCcEEEeeccCceec
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLL 441 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~ 441 (581)
||||+.+++|.+++..... +++..++.++.||+.||+||| ++||+||||||+||++ +.++.+||+|||++..+
T Consensus 104 v~e~~~~~~L~~~~~~~~~-~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRKR-FSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp EECCCCSCBHHHHHHTCSC-CBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 9999999999999986654 789999999999999999999 8999999999999999 46789999999999876
Q ss_pred CCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccc
Q 008012 442 GEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADA 521 (581)
Q Consensus 442 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (581)
..... .....||+.|+|||++.+ .++.++||||+||++|+|++|++||..... ......+....... +
T Consensus 180 ~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~~~-~----- 247 (484)
T 3nyv_A 180 EASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILKKVEKGKYTF-E----- 247 (484)
T ss_dssp CCCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCCCCC-C-----
T ss_pred ccccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHcCCCCC-C-----
Confidence 44322 234579999999998876 699999999999999999999999976322 11222222211100 0
Q ss_pred cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 522 NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+....+++.+.++|.+||..||++|||+.|+++|
T Consensus 248 --------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 248 --------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp --------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 01122345678899999999999999999999986
No 211
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=5.6e-41 Score=351.88 Aligned_cols=264 Identities=17% Similarity=0.211 Sum_probs=212.6
Q ss_pred hhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCC-CccceEeeeeecCCeeeEEE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRH-RNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~~iv~~~~~~~~~~~~~lv~ 366 (581)
..++|++.+.||+|+||.||+|.+ .+++.||||++...... ..+.+|+++++.++| +++..+..++...+..++||
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 457899999999999999999996 47999999988655322 357789999999976 56666666777888899999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---cCCCcEEEeeccCceecCC
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL---DENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill---~~~~~~kl~Dfg~a~~~~~ 443 (581)
||+ +++|.+++......+++..++.|+.||+.||+||| ++||+||||||+|||+ +.++.+||+|||+++.+..
T Consensus 83 e~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 999 89999999976667899999999999999999999 8999999999999999 6889999999999988754
Q ss_pred CCCcc-----eeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccc--cHHHHHHhhCCCCCC
Q 008012 444 GDDSV-----IQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM--NLKNWVKESLPHGLP 516 (581)
Q Consensus 444 ~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~~~~~ 516 (581)
..... ......||..|+|||++.+..++.++|||||||++|||++|+.||........ .+..+.......
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~--- 235 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVAT--- 235 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHS---
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccc---
Confidence 33211 12355799999999999999999999999999999999999999987433211 111111111000
Q ss_pred ccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 517 KIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
........++.++.+++..||+.||++||++++|++.|+++....
T Consensus 236 -----------~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 236 -----------SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp -----------CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----------cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 001112345678999999999999999999999999999987644
No 212
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.9e-41 Score=367.95 Aligned_cols=264 Identities=23% Similarity=0.369 Sum_probs=212.6
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEeC----CCcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeecC
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGILS----DGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNT 359 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 359 (581)
+.+...++|++.+.||+|+||.||+|.+. .+..||+|.++.. .....+.+.+|+.++++++||||+++++++. .
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 44455678899999999999999999864 2467999998764 3445578999999999999999999999985 4
Q ss_pred CeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCce
Q 008012 360 NFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK 439 (581)
Q Consensus 360 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~ 439 (581)
+..++||||+++|+|.+++......+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCe
Confidence 5689999999999999999977767899999999999999999999 8999999999999999999999999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||...... .....+........+
T Consensus 540 ~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~~~~~~~~-- 614 (656)
T 2j0j_A 540 YMEDSTY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGERLPMP-- 614 (656)
T ss_dssp SCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHHTCCCCCC--
T ss_pred ecCCCcc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcCCCCCCC--
Confidence 7643322 22233456789999999988899999999999999999997 99999764221 222222222111111
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 519 ADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
..+++.+.++|.+||+.||++|||+.|+++.|+++.++.
T Consensus 615 ---------------~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 615 ---------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp ---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---------------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 134567889999999999999999999999999997654
No 213
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.5e-41 Score=335.22 Aligned_cols=268 Identities=24% Similarity=0.319 Sum_probs=204.0
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH--HHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEEE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE--QAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
.++|++.+.||+|+||.||+|..+ +++.||+|+++.... .....+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 367899999999999999999976 799999999876532 22356889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 367 EFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
||++ ++|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 9997 59999998653 45789999999999999999999 8899999999999999999999999999998764322
Q ss_pred CcceeeccccCccccCCCCCCCCC-CCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC---CCccc--
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGN-VSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG---LPKIA-- 519 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~---~~~~~-- 519 (581)
. ......+++.|+|||++.+.. ++.++||||||+++|+|++|+.||...... .............. .+...
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 158 R--TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp B--CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred c--ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCchhhhhHhhcC
Confidence 1 123346899999999887765 799999999999999999999999764221 12222222211110 00000
Q ss_pred ---cccchh--hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 520 ---DANLLR--EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 520 ---~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+.... ..........++..+.+++.+||+.||++|||+.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000 000011112345678899999999999999999999985
No 214
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.3e-41 Score=346.34 Aligned_cols=264 Identities=21% Similarity=0.265 Sum_probs=187.6
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecC-----
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNT----- 359 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 359 (581)
...++|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++...
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 34588999999999999999999954 7899999998653 334556788999999999999999999998654
Q ss_pred -CeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCc
Q 008012 360 -NFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGIS 438 (581)
Q Consensus 360 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a 438 (581)
...++|||++ +++|.+++... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CCCCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC----
T ss_pred CCeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 5679999999 78999988763 4789999999999999999999 899999999999999999999999999999
Q ss_pred eecCCCCCcceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCc
Q 008012 439 KLLGEGDDSVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPK 517 (581)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 517 (581)
+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ...+.. +.........+
T Consensus 180 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~l~~-i~~~~g~p~~~ 252 (367)
T 2fst_X 180 RHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKL-ILRLVGTPGAE 252 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHH-HHHHHCSCCHH
T ss_pred cccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHH-HHHHhCCCCHH
Confidence 865322 234578999999998876 6889999999999999999999999976322 111222 21111111000
Q ss_pred cc----cccch---------hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 518 IA----DANLL---------REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 518 ~~----~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.. ..... ...........+++.+.+|+.+||..||++|||+.|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 00 00000 0000001112345678899999999999999999999986
No 215
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3e-41 Score=344.15 Aligned_cols=269 Identities=21% Similarity=0.245 Sum_probs=205.8
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecC-----C
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNT-----N 360 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~ 360 (581)
...++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 44578999999999999999999965 78899999997543 44457789999999999999999999998654 3
Q ss_pred eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..++||||+++ +|.+++.... +++..++.++.||+.||+||| +.||+||||||+||+++.++.+||+|||++..
T Consensus 104 ~~~iv~e~~~~-~L~~~l~~~~--~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 104 DVYIVQDLMET-DLYKLLKTQH--LSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp CEEEEEECCSE-EHHHHHHHCC--CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEcccCc-CHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 68999999974 9999997653 789999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCcc-eeeccccCccccCCCCCC-CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 441 LGEGDDSV-IQTMTIATIGYMAPEFGS-EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 441 ~~~~~~~~-~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
........ ......||+.|+|||++. +..++.++|||||||++|+|++|+.||...... ..+.... ........+.
T Consensus 178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~-~~~~~~~~~~ 255 (364)
T 3qyz_A 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL-DQLNHIL-GILGSPSQED 255 (364)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG-GHHHHHH-HHHCSCCHHH
T ss_pred cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH-HHHHHHH-HHhCCCCHHH
Confidence 64332211 123457899999999754 456899999999999999999999999764222 1222222 1111111100
Q ss_pred ccccch-------------hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 519 ADANLL-------------REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 519 ~~~~~~-------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...... ...+.......++..+.+++.+||+.||++|||+.|+++|
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000 0000011112345678899999999999999999999986
No 216
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.6e-41 Score=351.42 Aligned_cols=198 Identities=24% Similarity=0.310 Sum_probs=173.5
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhc------CCCccceEeeeeecCCe
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV------RHRNLIKILSSCCNTNF 361 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~~ 361 (581)
...+|++.+.||+|+||.||+|... +++.||||+++... ...+.+.+|+++++.+ .|+||+++++++...+.
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 4568999999999999999999865 68999999997653 3345677888888887 57799999999999999
Q ss_pred eeEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc--EEEeeccCc
Q 008012 362 KALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV--AHVSDFGIS 438 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~--~kl~Dfg~a 438 (581)
.++||||+. ++|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+|||++.++. +||+|||++
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 999999996 59999998654 34799999999999999999999 889999999999999999887 999999999
Q ss_pred eecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Q 008012 439 KLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEM 496 (581)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~ 496 (581)
...... .....||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus 250 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 250 CYEHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp EETTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 865432 23457899999999999999999999999999999999999999764
No 217
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-41 Score=348.38 Aligned_cols=267 Identities=20% Similarity=0.266 Sum_probs=202.2
Q ss_pred HHhhcCCCcCCeecccccccEEEEEe-CCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeec-------
Q 008012 287 ERATDGFNECNLLGSGGFGSVYKGIL-SDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN------- 358 (581)
Q Consensus 287 ~~~~~~y~~~~~lg~G~~~~v~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------- 358 (581)
+...++|++.+.||+|+||.||+|.. .+|+.||+|++..... ...+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 45678899999999999999999996 4899999999875532 23469999999999999999999843
Q ss_pred -------------------------------CCeeeEEEeccCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHH
Q 008012 359 -------------------------------TNFKALVLEFMPNGSLDKWLYS---HNYFQDIPDRLNIMIDVALALEYL 404 (581)
Q Consensus 359 -------------------------------~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~i~~~i~~~L~~L 404 (581)
....++||||+++ +|.+.+.. .+..+++..++.++.||+.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3348899999985 88877763 455689999999999999999999
Q ss_pred hcCCCCCceecCCCCCCeEec-CCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCC-CCCccccHHHHHHH
Q 008012 405 HHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGIL 482 (581)
Q Consensus 405 H~~~~~~i~H~dikp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~v 482 (581)
| +.||+||||||+||+++ .++.+||+|||++........ .....+++.|+|||++.+. .++.++||||+||+
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9 89999999999999998 688999999999987644332 2345689999999987764 58999999999999
Q ss_pred HHHHHhCCCCCCccccccccHHHHHHhhCCC---------------CCCccccccchhhhhhhhHHHHHHHHHHHHHHhc
Q 008012 483 LLETFTRKKPTDEMFTGEMNLKNWVKESLPH---------------GLPKIADANLLREENFFSARMDCLLSIFHLALDC 547 (581)
Q Consensus 483 l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 547 (581)
+|||++|++||..... ...+...+...-.. .++......+. ...+..++..+.+++.+|
T Consensus 232 l~ell~g~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~ 305 (383)
T 3eb0_A 232 FGELILGKPLFSGETS-IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWR-----KILPEGTPSLAIDLLEQI 305 (383)
T ss_dssp HHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHH-----HHSCTTCCHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHH-----hhCCCCCCHHHHHHHHHH
Confidence 9999999999986422 22222222211110 01111111110 011123566789999999
Q ss_pred cCcCCCCCCCHHHHHHH--HHHhHH
Q 008012 548 CAELPDQRLYMKDAATK--LKKIRD 570 (581)
Q Consensus 548 l~~dP~~Rps~~evl~~--L~~~~~ 570 (581)
|..||++|||+.|+++| ++++++
T Consensus 306 L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 306 LRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp CCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred ccCChhhCCCHHHHhcCHHHHHHHh
Confidence 99999999999999976 555544
No 218
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-42 Score=347.87 Aligned_cols=255 Identities=22% Similarity=0.273 Sum_probs=203.4
Q ss_pred hcCCCcCCeecccccccEEEEEe----CCCcEEEEEEeccch----HHHHHHHHHHHHHHHhc-CCCccceEeeeeecCC
Q 008012 290 TDGFNECNLLGSGGFGSVYKGIL----SDGTTVAIKIFNLQL----EQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTN 360 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~ 360 (581)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46899999999999999999996 378999999986532 12234567899999999 7999999999999999
Q ss_pred eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..++||||+++++|.+++.... .+++..++.++.||+.||.||| +.||+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999998654 3789999999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCcceeeccccCccccCCCCCCC--CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 441 LGEGDDSVIQTMTIATIGYMAPEFGSE--GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+........ +.
T Consensus 209 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~-~~- 284 (355)
T 1vzo_A 209 FVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK-NSQAEISRRILKSE-PP- 284 (355)
T ss_dssp CCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC-CCHHHHHHHHHHCC-CC-
T ss_pred cccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc-chHHHHHHHHhccC-CC-
Confidence 643221 22334579999999998875 35789999999999999999999999753222 12222222211110 00
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCC-----CHHHHHHHH
Q 008012 519 ADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRL-----YMKDAATKL 565 (581)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~L 565 (581)
.+..++..+.++|.+||..||++|| |++|++++.
T Consensus 285 -------------~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 285 -------------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp -------------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred -------------CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 0112345678999999999999999 999999875
No 219
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=339.98 Aligned_cols=262 Identities=23% Similarity=0.306 Sum_probs=201.7
Q ss_pred ccchhhhHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhc-CCCccceEeeee
Q 008012 279 RRTSYLDLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRNLIKILSSC 356 (581)
Q Consensus 279 ~~~~~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~ 356 (581)
......++....++|++.+.||+|+||.||+|... +++.||+|++..... ..+.+.+|+.+++++ +||||+++++++
T Consensus 12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 90 (326)
T 2x7f_A 12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAF 90 (326)
T ss_dssp ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence 33455566677899999999999999999999964 789999999875432 235688999999999 899999999999
Q ss_pred ec------CCeeeEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc
Q 008012 357 CN------TNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV 429 (581)
Q Consensus 357 ~~------~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~ 429 (581)
.. .+..++||||+++++|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+||+++.++.
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCC
T ss_pred eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCC
Confidence 76 467899999999999999998653 45789999999999999999999 889999999999999999999
Q ss_pred EEEeeccCceecCCCCCcceeeccccCccccCCCCCC-----CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHH
Q 008012 430 AHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS-----EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLK 504 (581)
Q Consensus 430 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~ 504 (581)
+||+|||++....... .......|++.|+|||++. +..++.++|||||||++|+|++|+.||....... ..
T Consensus 168 ~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~ 243 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR--AL 243 (326)
T ss_dssp EEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HH
T ss_pred EEEeeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--HH
Confidence 9999999998664321 1223456899999999876 5678999999999999999999999997632211 11
Q ss_pred HHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 505 NWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..+..... +.... ..++..+.++|.+||..||++|||+.|++++
T Consensus 244 ~~~~~~~~---~~~~~-------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 244 FLIPRNPA---PRLKS-------------KKWSKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HHHHHSCC---CCCSC-------------SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHhhcCcc---ccCCc-------------cccCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11111111 11111 1234568899999999999999999999985
No 220
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.8e-41 Score=367.30 Aligned_cols=251 Identities=21% Similarity=0.249 Sum_probs=206.5
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCee
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFK 362 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~ 362 (581)
...++|++.+.||+|+||.||+|+.+ +++.||||+++... ....+.+..|..++..+ +||+|+++++++.+.+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 34678999999999999999999965 78899999998653 22345678899999988 799999999999999999
Q ss_pred eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecC
Q 008012 363 ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLG 442 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~ 442 (581)
|+||||+++|+|.+++...+. +++..++.++.||+.||+||| ++||+||||||+|||++.++.+||+|||+++...
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHSS-CCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEeCcCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 999999999999999987654 789999999999999999999 8999999999999999999999999999998643
Q ss_pred CCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccccc
Q 008012 443 EGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADAN 522 (581)
Q Consensus 443 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (581)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+.+.+..... .++
T Consensus 494 ~~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--~~~~~~i~~~~~-~~p------ 562 (674)
T 3pfq_A 494 WDGV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIMEHNV-AYP------ 562 (674)
T ss_dssp CTTC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHSSCC-CCC------
T ss_pred cCCc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--HHHHHHHHhCCC-CCC------
Confidence 2222 23456799999999999999999999999999999999999999976321 122222221110 111
Q ss_pred chhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCH-----HHHHHH
Q 008012 523 LLREENFFSARMDCLLSIFHLALDCCAELPDQRLYM-----KDAATK 564 (581)
Q Consensus 523 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~~ 564 (581)
..++.++.+||.+||..||++||++ +||++|
T Consensus 563 -----------~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 563 -----------KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp -----------TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred -----------ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 1234568899999999999999998 777664
No 221
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.7e-41 Score=348.91 Aligned_cols=266 Identities=20% Similarity=0.232 Sum_probs=203.9
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcC--------CCccceEeeeee--
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR--------HRNLIKILSSCC-- 357 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~~iv~~~~~~~-- 357 (581)
..++|++.+.||+|+||.||+|+.. +++.||+|+++... ...+.+.+|++++++++ |+||+++++++.
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred cCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 3578999999999999999999954 78999999997653 34567889999999995 788999999987
Q ss_pred --cCCeeeEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeEecCCC-----
Q 008012 358 --NTNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHST-PVVHCDLKPSNILLDENM----- 428 (581)
Q Consensus 358 --~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dikp~Nill~~~~----- 428 (581)
.....++||||+ ++++.+++... ...+++..++.++.||+.||+||| ++ ||+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhh
Confidence 566899999999 55666666644 356899999999999999999999 77 999999999999998775
Q ss_pred --------------------------------------------cEEEeeccCceecCCCCCcceeeccccCccccCCCC
Q 008012 429 --------------------------------------------VAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEF 464 (581)
Q Consensus 429 --------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 464 (581)
.+||+|||.+...... .....||+.|+|||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChh
Confidence 7999999999876432 234468999999999
Q ss_pred CCCCCCCccccHHHHHHHHHHHHhCCCCCCcccccccc----HHHHHHhhCCCCCC--------------------cccc
Q 008012 465 GSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMN----LKNWVKESLPHGLP--------------------KIAD 520 (581)
Q Consensus 465 ~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~----~~~~~~~~~~~~~~--------------------~~~~ 520 (581)
+.+..++.++|||||||++|||++|+.||......... ....+......... .+.+
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 99989999999999999999999999999764332211 11111111110000 0000
Q ss_pred ccchh----hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 521 ANLLR----EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 521 ~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..... ...........+..+.+||.+||+.||++|||++|+++|
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 00000 000111234567789999999999999999999999975
No 222
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=336.44 Aligned_cols=268 Identities=21% Similarity=0.272 Sum_probs=199.1
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeee----------
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCC---------- 357 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~---------- 357 (581)
..++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 9 LGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp ETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred cCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 3578999999999999999999976 68999999998777777788999999999999999999999873
Q ss_pred ----cCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCcEEE
Q 008012 358 ----NTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLD-ENMVAHV 432 (581)
Q Consensus 358 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~-~~~~~kl 432 (581)
+.+..++||||++ |+|.+++... .+++..++.++.|++.||+||| +.||+||||||+||+++ +++.+||
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEE
Confidence 3467899999997 5999999753 4788999999999999999999 89999999999999997 5679999
Q ss_pred eeccCceecCCCCC-cceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 008012 433 SDFGISKLLGEGDD-SVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510 (581)
Q Consensus 433 ~Dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~ 510 (581)
+|||++........ ........++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .....+...
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~ 240 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL--EQMQLILES 240 (320)
T ss_dssp CCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHH
T ss_pred ccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHh
Confidence 99999987643211 112234467899999997754 67899999999999999999999999764321 111112222
Q ss_pred CCCCCCc-----------cccccchh-hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 511 LPHGLPK-----------IADANLLR-EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 511 ~~~~~~~-----------~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+..... ........ ..+.......++..+.++|.+||+.||++|||++|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 241 IPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp SCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 1111000 00000000 000011122456789999999999999999999999986
No 223
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.4e-41 Score=334.79 Aligned_cols=254 Identities=25% Similarity=0.329 Sum_probs=196.3
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeec---------
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN--------- 358 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------- 358 (581)
..++|++.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 3567999999999999999999965 79999999997543 445778999999999999999999998754
Q ss_pred ----CCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEee
Q 008012 359 ----TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSD 434 (581)
Q Consensus 359 ----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~D 434 (581)
.+..++||||+++++|.+++.......++..++.++.|++.||+||| +.||+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEee
Confidence 45789999999999999999977766788999999999999999999 88999999999999999999999999
Q ss_pred ccCceecCCCCC------------cceeeccccCccccCCCCCCCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccc
Q 008012 435 FGISKLLGEGDD------------SVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKPTDEMFTGEM 501 (581)
Q Consensus 435 fg~a~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~ 501 (581)
||.+........ ........|++.|+|||++.+. .++.++|||||||++|+|++ ||.......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~- 235 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV- 235 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH-
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHH-
Confidence 999986642211 1122345689999999988764 78999999999999999998 554321111
Q ss_pred cHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 502 NLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.....+.... ..++.... ..++..+.+++.+||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~-~~~~~~~~-------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 236 NILKKLRSVS-IEFPPDFD-------------DNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHSTT-CCCCTTCC-------------TTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHhccccc-cccCcccc-------------ccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1111111111 11111111 1234567899999999999999999999986
No 224
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.1e-40 Score=336.57 Aligned_cols=264 Identities=22% Similarity=0.273 Sum_probs=205.8
Q ss_pred hhcCCCcCCeecccccccEEEEEe-C-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCC------ccceEeeeeecCC
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGIL-S-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHR------NLIKILSSCCNTN 360 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~-~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~------~iv~~~~~~~~~~ 360 (581)
..++|++.+.||+|+||.||+|.. . +++.||+|+++... ...+.+.+|+++++.++|+ +++++++++.+.+
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 457899999999999999999986 3 68899999997653 3456788999999998655 4999999999999
Q ss_pred eeeEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-------------
Q 008012 361 FKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE------------- 426 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~------------- 426 (581)
..++||||+ +++|.+++...+ ..+++..++.++.||+.||+||| ++||+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcccc
Confidence 999999999 889999998664 35789999999999999999999 899999999999999987
Q ss_pred ------CCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc
Q 008012 427 ------NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE 500 (581)
Q Consensus 427 ------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~ 500 (581)
++.+||+|||.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~- 240 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK- 240 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH-
T ss_pred ccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH-
Confidence 668999999999875432 23456899999999999999999999999999999999999999764221
Q ss_pred ccHHHHHHhhCCCCCCccccc------------cch--------------hhhhhhhHHHHHHHHHHHHHHhccCcCCCC
Q 008012 501 MNLKNWVKESLPHGLPKIADA------------NLL--------------REENFFSARMDCLLSIFHLALDCCAELPDQ 554 (581)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~------------~~~--------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 554 (581)
.....+.............. ... ...........+++.+.+++.+||+.||++
T Consensus 241 -~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 241 -EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp -HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred -HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 11111221111100000000 000 000001112345678999999999999999
Q ss_pred CCCHHHHHHH
Q 008012 555 RLYMKDAATK 564 (581)
Q Consensus 555 Rps~~evl~~ 564 (581)
|||++|+++|
T Consensus 320 Rpt~~ell~h 329 (339)
T 1z57_A 320 RITLREALKH 329 (339)
T ss_dssp SCCHHHHTTS
T ss_pred ccCHHHHhcC
Confidence 9999999976
No 225
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.8e-40 Score=337.22 Aligned_cols=269 Identities=23% Similarity=0.234 Sum_probs=203.5
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHHHHHhcCCCccceEeeeeecC-----Ce
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECEVLRNVRHRNLIKILSSCCNT-----NF 361 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~ 361 (581)
..++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 4678999999999999999999965 78999999997543 44456788999999999999999999987654 67
Q ss_pred eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceec
Q 008012 362 KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
.++||||++ ++|.+++... .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++...
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 899999997 5999999874 4789999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCcc--------eeeccccCccccCCCCCC-CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCC
Q 008012 442 GEGDDSV--------IQTMTIATIGYMAPEFGS-EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLP 512 (581)
Q Consensus 442 ~~~~~~~--------~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 512 (581)
....... ......||+.|+|||++. +..++.++|||||||++|+|++|++||...... ..+.........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~ 241 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR-HQLLLIFGIIGT 241 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCC
Confidence 5322111 112346899999999765 477899999999999999999999999764221 111111111110
Q ss_pred CC----CCccccccchh---------hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 513 HG----LPKIADANLLR---------EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 513 ~~----~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.. ........... ..........+++.+.+++.+||+.||++|||++|+++|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 00000000000 000011123456788999999999999999999999985
No 226
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=6.5e-41 Score=347.66 Aligned_cols=262 Identities=23% Similarity=0.281 Sum_probs=195.9
Q ss_pred cCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecC------Ceee
Q 008012 291 DGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNT------NFKA 363 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~~ 363 (581)
.+|++.+.||+|+||.||+|++. +|+.||||++..... ...+|++++++++||||+++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46889999999999999999975 699999999865432 234699999999999999999988532 2467
Q ss_pred EEEeccCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-CcEEEeeccCce
Q 008012 364 LVLEFMPNGSLDKWLY---SHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDEN-MVAHVSDFGISK 439 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~-~~~kl~Dfg~a~ 439 (581)
+||||+++ ++.+.+. .....+++..++.++.||+.||+||| +.||+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999976 6666655 34556899999999999999999999 8999999999999999955 678999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCCCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCC-----
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH----- 513 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~----- 513 (581)
.+..... .....+|+.|+|||++.+. .++.++|||||||++|||++|++||..... ...+..++...-..
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHH
Confidence 7643322 2345789999999988664 799999999999999999999999976422 22222322211100
Q ss_pred -----CCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 514 -----GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 514 -----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
......-+.+....-........+.++.+||.+||..||++|||+.|+++|
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000000000000000000012345678899999999999999999999976
No 227
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=339.97 Aligned_cols=267 Identities=21% Similarity=0.337 Sum_probs=205.2
Q ss_pred hhhHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCC
Q 008012 283 YLDLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN 360 (581)
Q Consensus 283 ~~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 360 (581)
..+++...++|++.+.||+|+||.||+|..++ .+|+|+++... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 34455667899999999999999999999763 59999986542 222345778999999999999999999999999
Q ss_pred eeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 361 FKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..++||||+++++|.+++...+..+++..++.++.||+.||+||| +.||+||||||+||+++ ++.+||+|||++..
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~ 178 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSI 178 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccc
Confidence 999999999999999999887767899999999999999999999 89999999999999998 67999999999876
Q ss_pred cCCCC---CcceeeccccCccccCCCCCCC---------CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHH
Q 008012 441 LGEGD---DSVIQTMTIATIGYMAPEFGSE---------GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVK 508 (581)
Q Consensus 441 ~~~~~---~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~ 508 (581)
..... .........|++.|+|||++.+ ..++.++||||||+++|||++|+.||...... .....+.
T Consensus 179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~ 256 (319)
T 2y4i_B 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE--AIIWQMG 256 (319)
T ss_dssp ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH--HHHHHHH
T ss_pred cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhc
Confidence 53211 1112233458999999998764 45788999999999999999999999763221 1111111
Q ss_pred hhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHHH
Q 008012 509 ESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKFL 573 (581)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 573 (581)
.... +..... .++..+.+++.+||..||++|||+.++++.|+++.++..
T Consensus 257 ~~~~---~~~~~~-------------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 257 TGMK---PNLSQI-------------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp TTCC---CCCCCS-------------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred cCCC---CCCCcC-------------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 1111 111111 123457899999999999999999999999999886643
No 228
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.8e-40 Score=338.20 Aligned_cols=204 Identities=26% Similarity=0.318 Sum_probs=174.9
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcC-CC-----ccceEeeeee
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HR-----NLIKILSSCC 357 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----~iv~~~~~~~ 357 (581)
..+...++|++.+.||+|+||.||+|... +++.||||+++... .....+.+|+.+++.++ |+ +|+++++++.
T Consensus 48 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 48 NGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp TTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred cCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 34455789999999999999999999965 78899999997553 33456778999988884 55 4999999999
Q ss_pred cCCeeeEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec--CCCcEEEee
Q 008012 358 NTNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLD--ENMVAHVSD 434 (581)
Q Consensus 358 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~--~~~~~kl~D 434 (581)
..+..++||||+++ +|.+++.... ..+++..+..++.|++.||.|||. ++.||+||||||+||+++ .++.+||+|
T Consensus 127 ~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 127 FRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp ETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred cCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 99999999999964 9999998654 457999999999999999999993 247899999999999995 478899999
Q ss_pred ccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Q 008012 435 FGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEM 496 (581)
Q Consensus 435 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~ 496 (581)
||++...... .....||+.|+|||++.+..++.++|||||||++|||++|++||...
T Consensus 205 FG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 205 FGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999876432 23457899999999999999999999999999999999999999864
No 229
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.5e-40 Score=339.79 Aligned_cols=262 Identities=24% Similarity=0.255 Sum_probs=200.2
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCee---
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFK--- 362 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~--- 362 (581)
..++|.+.+.||+|+||.||+|... +|+.||+|++... .......+.+|+.+++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4578999999999999999999965 7999999999764 344457788999999999999999999999877654
Q ss_pred ---eEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCce
Q 008012 363 ---ALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK 439 (581)
Q Consensus 363 ---~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~ 439 (581)
++||||++ ++|.+++.. .+++..+..++.|++.||+||| +.||+||||||+||+++.++.+||+|||++.
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eeEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999997 588887743 3789999999999999999999 8899999999999999999999999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
..... .....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...... ..+........... ...
T Consensus 193 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~-~~~ 265 (371)
T 4exu_A 193 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPG-TEF 265 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCC-HHH
T ss_pred ccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCc-HHH
Confidence 65322 234568999999998877 78899999999999999999999999763211 11222221111100 000
Q ss_pred ccc---cch----------hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 519 ADA---NLL----------REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 519 ~~~---~~~----------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
... ... ...........+++.+.+||.+||+.||++|||++|+++|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000 000 0000011112346778999999999999999999999986
No 230
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.6e-40 Score=327.35 Aligned_cols=254 Identities=23% Similarity=0.290 Sum_probs=205.4
Q ss_pred HHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeee
Q 008012 287 ERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 287 ~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 445678999999999999999999975 78999999986543 233467889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC---CcEEEeeccCcee
Q 008012 364 LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDEN---MVAHVSDFGISKL 440 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~---~~~kl~Dfg~a~~ 440 (581)
+||||+++++|.+++.... .+++..++.++.||+.||+||| +.|++||||||+||+++.+ +.+||+|||++..
T Consensus 98 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 9999999999999987654 3789999999999999999999 8999999999999999754 4799999999986
Q ss_pred cCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccc
Q 008012 441 LGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIAD 520 (581)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (581)
...... .....+++.|+|||.+.+ .++.++||||||+++|+|++|+.||...... .....+....... +
T Consensus 174 ~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~-~---- 242 (287)
T 2wei_A 174 FQQNTK---MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYAF-D---- 242 (287)
T ss_dssp BCCCSS---CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCC-C----
T ss_pred ecCCCc---cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCCC-C----
Confidence 643321 233458899999998776 4899999999999999999999999764221 1222221111100 0
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 521 ANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+....++..+.+++.+||..||++|||+.|++++
T Consensus 243 ---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 243 ---------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp ---------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 01112345678899999999999999999999986
No 231
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.9e-41 Score=346.46 Aligned_cols=270 Identities=20% Similarity=0.213 Sum_probs=185.6
Q ss_pred hhcCCCc-CCeecccccccEEEEEeC---CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeec--CCee
Q 008012 289 ATDGFNE-CNLLGSGGFGSVYKGILS---DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN--TNFK 362 (581)
Q Consensus 289 ~~~~y~~-~~~lg~G~~~~v~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~ 362 (581)
..+.|++ .++||+|+||.||+|..+ +++.||+|++...... ..+.+|++++++++||||+++++++.. ....
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS--MSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC--HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC--HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 3445666 458999999999999965 5789999999765322 357789999999999999999999954 6789
Q ss_pred eEEEeccCCCCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe----cCCCcE
Q 008012 363 ALVLEFMPNGSLDKWLYSH--------NYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL----DENMVA 430 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill----~~~~~~ 430 (581)
++||||+++ +|.+++... ...+++..++.++.||+.||+||| +.||+||||||+|||+ +.++.+
T Consensus 96 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcE
Confidence 999999965 888887632 224789999999999999999999 8999999999999999 677899
Q ss_pred EEeeccCceecCCCCCc-ceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCcccccc--------
Q 008012 431 HVSDFGISKLLGEGDDS-VIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE-------- 500 (581)
Q Consensus 431 kl~Dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~-------- 500 (581)
||+|||++......... .......||+.|+|||++.+ ..++.++|||||||++|||++|++||.......
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 251 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence 99999999876432211 22344578999999998877 458999999999999999999999997543210
Q ss_pred ccHHHHHHhhCCCC---CCcccccc--------chhhh-hh-------hhHHHHHHHHHHHHHHhccCcCCCCCCCHHHH
Q 008012 501 MNLKNWVKESLPHG---LPKIADAN--------LLREE-NF-------FSARMDCLLSIFHLALDCCAELPDQRLYMKDA 561 (581)
Q Consensus 501 ~~~~~~~~~~~~~~---~~~~~~~~--------~~~~~-~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 561 (581)
..+...+...-... +..+.... +.... .. .......+..+.+||.+||..||++|||++|+
T Consensus 252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~ 331 (405)
T 3rgf_A 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331 (405)
T ss_dssp HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 11222221111111 11000000 00000 00 00000114568899999999999999999999
Q ss_pred HHH
Q 008012 562 ATK 564 (581)
Q Consensus 562 l~~ 564 (581)
++|
T Consensus 332 L~h 334 (405)
T 3rgf_A 332 MQD 334 (405)
T ss_dssp HTS
T ss_pred hcC
Confidence 986
No 232
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.3e-41 Score=346.18 Aligned_cols=260 Identities=24% Similarity=0.305 Sum_probs=196.4
Q ss_pred hhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCC------ee
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTN------FK 362 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------~~ 362 (581)
...+|++.+.||+|+||.||+|+...+..||+|.+..... ...+|+++++.++||||+++++++...+ ..
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 113 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence 3467999999999999999999987667799998765432 2236999999999999999999985533 37
Q ss_pred eEEEeccCCCCHHHHHh--hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCcEEEeeccCce
Q 008012 363 ALVLEFMPNGSLDKWLY--SHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLD-ENMVAHVSDFGISK 439 (581)
Q Consensus 363 ~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~-~~~~~kl~Dfg~a~ 439 (581)
++||||++++.+..... .....+++..++.++.||+.||+||| +.||+||||||+||+++ .++.+||+|||+++
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 89999998754333322 33456899999999999999999999 89999999999999999 79999999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCCCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCC-----
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPH----- 513 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~----- 513 (581)
....... .....+|+.|+|||++.+. .++.++||||+||++|||++|++||..... ...+...+...-..
T Consensus 191 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 191 ILIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGTPSREQI 266 (394)
T ss_dssp ECCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHH
T ss_pred cccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHH
Confidence 7643332 2345689999999987664 589999999999999999999999976422 12222222211100
Q ss_pred ----------CCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 514 ----------GLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 514 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.++......+. ......+++++.+|+.+||..||++|||+.|+++|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFS-----KVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHH-----HHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhhChhhhhhccccccCCcHH-----HhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 01111110000 00112355678999999999999999999999986
No 233
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.5e-40 Score=334.05 Aligned_cols=257 Identities=23% Similarity=0.297 Sum_probs=182.0
Q ss_pred HHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch-HHHHHHHHHHHH-HHHhcCCCccceEeeeeecCCeee
Q 008012 287 ERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL-EQAFRSFNSECE-VLRNVRHRNLIKILSSCCNTNFKA 363 (581)
Q Consensus 287 ~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~-~l~~l~h~~iv~~~~~~~~~~~~~ 363 (581)
....++|++.+.||+|+||.||+|... +|+.||+|+++... ......+..|+. +++.++||||+++++++.+.+..+
T Consensus 18 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~ 97 (327)
T 3aln_A 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW 97 (327)
T ss_dssp CCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE
T ss_pred ccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE
Confidence 344688999999999999999999975 79999999997653 333445556666 666779999999999999999999
Q ss_pred EEEeccCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeEecCCCcEEEeeccCc
Q 008012 364 LVLEFMPNGSLDKWLYS----HNYFQDIPDRLNIMIDVALALEYLHHGHST-PVVHCDLKPSNILLDENMVAHVSDFGIS 438 (581)
Q Consensus 364 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dikp~Nill~~~~~~kl~Dfg~a 438 (581)
+||||+++ +|.+++.. ....+++..+..++.|++.||.||| +. ||+||||||+||+++.++.+||+|||++
T Consensus 98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 173 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSS
T ss_pred EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCc
Confidence 99999975 88887763 2455789999999999999999999 67 9999999999999999999999999999
Q ss_pred eecCCCCCcceeeccccCccccCCCCC----CCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC
Q 008012 439 KLLGEGDDSVIQTMTIATIGYMAPEFG----SEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG 514 (581)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 514 (581)
....... ......|++.|+|||++ .+..++.++||||||+++|+|++|+.||....... ..+.......
T Consensus 174 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~~ 246 (327)
T 3aln_A 174 GQLVDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----DQLTQVVKGD 246 (327)
T ss_dssp CC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCSC
T ss_pred eeccccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----HHHHHHhcCC
Confidence 8664322 12334689999999998 56678999999999999999999999997532111 1111111111
Q ss_pred CCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 515 LPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+..... ....++..+.+++.+||..||++|||+.|++++
T Consensus 247 ~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 247 PPQLSNS----------EEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp CCCCCCC----------SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCCCc----------ccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 1111100 011234578899999999999999999999886
No 234
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.5e-40 Score=333.99 Aligned_cols=269 Identities=25% Similarity=0.309 Sum_probs=203.5
Q ss_pred HhhcCCCcCCeecccccccEEEEEe--CCCcEEEEEEeccchH--HHHHHHHHHHHHHHhc---CCCccceEeeeee---
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGIL--SDGTTVAIKIFNLQLE--QAFRSFNSECEVLRNV---RHRNLIKILSSCC--- 357 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~~iv~~~~~~~--- 357 (581)
...++|++.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4568899999999999999999997 3688999999865431 1122455677777766 8999999999987
Q ss_pred --cCCeeeEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEee
Q 008012 358 --NTNFKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSD 434 (581)
Q Consensus 358 --~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~D 434 (581)
.....++||||++ |+|.+++.... ..+++..++.++.|++.||.||| +.||+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEec
Confidence 5567899999997 59999998653 34789999999999999999999 89999999999999999999999999
Q ss_pred ccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC
Q 008012 435 FGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG 514 (581)
Q Consensus 435 fg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~ 514 (581)
||++....... ......++..|+|||++.+..++.++||||||+++|+|++|+.||...... ..+...+.......
T Consensus 164 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~ 239 (326)
T 1blx_A 164 FGLARIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPG 239 (326)
T ss_dssp CCSCCCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCC
T ss_pred CcccccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCC
Confidence 99998654221 223456899999999999999999999999999999999999999764221 12222222111110
Q ss_pred ---CCcccc---ccch--hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 515 ---LPKIAD---ANLL--REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 515 ---~~~~~~---~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+.... .... ...........++..+.+++.+||..||++|||+.|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000 0000 0000011122456678899999999999999999999975
No 235
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=332.19 Aligned_cols=254 Identities=24% Similarity=0.273 Sum_probs=186.1
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
...++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+..+..+++.++||||+++++++.+.+..++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 34578899999999999999999975 79999999997653 2333445555667888899999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHST-PVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
||||+ ++.+..+.......+++..++.++.|++.||.||| +. ||+||||||+||+++.++.+||+|||++.....
T Consensus 102 v~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 99999 55666666655566899999999999999999999 64 999999999999999999999999999976543
Q ss_pred CCCcceeeccccCccccCCCCCC-----CCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 444 GDDSVIQTMTIATIGYMAPEFGS-----EGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 444 ~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
.. ......+++.|+|||++. +..++.++||||||+++|+|++|+.||................ .....+.
T Consensus 178 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~- 252 (318)
T 2dyl_A 178 DK---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE-EPPLLPG- 252 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS-CCCCCCS-
T ss_pred Cc---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc-CCCCCCc-
Confidence 22 223456899999999884 5578899999999999999999999997643222222222221 1111111
Q ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 519 ADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...++..+.+++.+||+.||++|||++|++++
T Consensus 253 --------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 253 --------------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp --------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred --------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 01234568899999999999999999999986
No 236
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.1e-40 Score=334.05 Aligned_cols=264 Identities=22% Similarity=0.287 Sum_probs=202.9
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CC-cEEEEEEeccchHHHHHHHHHHHHHHHhcCCCc------cceEeeeeecCC
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DG-TTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRN------LIKILSSCCNTN 360 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~------iv~~~~~~~~~~ 360 (581)
..++|++.+.||+|+||.||+|... ++ +.||+|+++... ...+.+.+|++++++++|++ ++.+++++...+
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 4578999999999999999999965 44 789999997653 34467888999999997655 899999999999
Q ss_pred eeeEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEe---------------
Q 008012 361 FKALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILL--------------- 424 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill--------------- 424 (581)
..++||||+ ++++.+++.... ..+++..++.++.||+.||+||| +.||+||||||+||++
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccc
Confidence 999999999 667777776553 45899999999999999999999 8999999999999999
Q ss_pred ----cCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc
Q 008012 425 ----DENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE 500 (581)
Q Consensus 425 ----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~ 500 (581)
+.++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~- 245 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR- 245 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-
T ss_pred cccccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 567899999999998754322 3456899999999999999999999999999999999999999764221
Q ss_pred ccHHHHHHhhCCCCCCccc----------------cccchhh----------hhhhhHHHHHHHHHHHHHHhccCcCCCC
Q 008012 501 MNLKNWVKESLPHGLPKIA----------------DANLLRE----------ENFFSARMDCLLSIFHLALDCCAELPDQ 554 (581)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~----------------~~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~dP~~ 554 (581)
.....+............ +...... ..........+..+.++|.+||+.||++
T Consensus 246 -~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 246 -EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp -HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred -HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 111112111111100000 0000000 0000111234567899999999999999
Q ss_pred CCCHHHHHHH
Q 008012 555 RLYMKDAATK 564 (581)
Q Consensus 555 Rps~~evl~~ 564 (581)
|||+.|+++|
T Consensus 325 Rpt~~e~l~h 334 (355)
T 2eu9_A 325 RITLAEALLH 334 (355)
T ss_dssp SCCHHHHTTS
T ss_pred CcCHHHHhcC
Confidence 9999999975
No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3.2e-40 Score=332.54 Aligned_cols=255 Identities=20% Similarity=0.253 Sum_probs=176.4
Q ss_pred HhhcCCCcCC-eecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeec----CCe
Q 008012 288 RATDGFNECN-LLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCN----TNF 361 (581)
Q Consensus 288 ~~~~~y~~~~-~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~ 361 (581)
...++|.+.+ .||+|+||.||+|... +++.||+|++...... .......++.+.||||+++++++.. ...
T Consensus 25 ~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA----RQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp CGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH----HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH----HHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 4567888865 6999999999999976 7999999999765321 1222334566799999999999876 446
Q ss_pred eeEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCcEEEeeccC
Q 008012 362 KALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE---NMVAHVSDFGI 437 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~---~~~~kl~Dfg~ 437 (581)
.++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 899999999999999998764 45899999999999999999999 889999999999999986 45699999999
Q ss_pred ceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCc
Q 008012 438 SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPK 517 (581)
Q Consensus 438 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 517 (581)
+....... .....+++.|+|||++.+..++.++||||||+++|+|++|+.||.......... . ...........
T Consensus 178 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~-~~~~~~~~~~~ 251 (336)
T 3fhr_A 178 AKETTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-G-MKRRIRLGQYG 251 (336)
T ss_dssp CEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------C
T ss_pred ceeccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-h-HHHhhhccccc
Confidence 98764322 234567999999999998899999999999999999999999997643221100 0 00000000000
Q ss_pred cccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHH
Q 008012 518 IADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKL 565 (581)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 565 (581)
.. ......++..+.+++.+||+.||++|||++|++++-
T Consensus 252 ~~----------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 252 FP----------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp CC----------TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred cC----------chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 00 001123456788999999999999999999999863
No 238
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=5.3e-40 Score=334.68 Aligned_cols=274 Identities=20% Similarity=0.225 Sum_probs=192.3
Q ss_pred hhHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCe-
Q 008012 284 LDLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNF- 361 (581)
Q Consensus 284 ~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~- 361 (581)
.......++|++.+.||+|+||.||+|... +++.||||++..... ......+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345567789999999999999999999975 789999998865432 12345678888889999999999999865332
Q ss_pred ------eeEEEeccCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-CCcEE
Q 008012 362 ------KALVLEFMPNGSLDKWLY---SHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE-NMVAH 431 (581)
Q Consensus 362 ------~~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~-~~~~k 431 (581)
.++||||+++ +|.+.+. .....+++..+..++.|++.||.||| .|+.||+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEE
Confidence 7899999986 5555444 24455788999999999999999999 34689999999999999996 89999
Q ss_pred EeeccCceecCCCCCcceeeccccCccccCCCCCCCC-CCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 008012 432 VSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG-NVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510 (581)
Q Consensus 432 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~ 510 (581)
|+|||++........ .....||+.|+|||++.+. .++.++|||||||++|+|++|+.||...... ..+.......
T Consensus 173 l~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~ 248 (360)
T 3e3p_A 173 LCDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVL 248 (360)
T ss_dssp ECCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH
T ss_pred EeeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHc
Confidence 999999987653322 2345689999999987654 4899999999999999999999999764221 2222222211
Q ss_pred CCCC-----------C-Cccccc-cchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 511 LPHG-----------L-PKIADA-NLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 511 ~~~~-----------~-~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.... . ....+. ..............++..+.+++.+||+.||++|||+.|+++|
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 1100 0 000000 0000000001111246789999999999999999999999986
No 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.9e-40 Score=340.23 Aligned_cols=252 Identities=23% Similarity=0.293 Sum_probs=189.4
Q ss_pred cCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeeeEEEecc
Q 008012 291 DGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKALVLEFM 369 (581)
Q Consensus 291 ~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 369 (581)
+.|...+.||+|+||+||.+...+|+.||||++..... +.+.+|+++++++ +||||+++++++.+.+..++||||+
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFC---DIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGH---HHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 34455678999999999877666799999999876543 3567899999987 8999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCC------CHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCC-------------CcE
Q 008012 370 PNGSLDKWLYSHNYFQ------DIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDEN-------------MVA 430 (581)
Q Consensus 370 ~~~~L~~~l~~~~~~~------~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~-------------~~~ 430 (581)
+ |+|.+++....... ++..++.++.||+.||+||| +.||+||||||+||+++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEE
Confidence 6 59999998654311 22345789999999999999 8999999999999999754 489
Q ss_pred EEeeccCceecCCCCCcc--eeeccccCccccCCCCCCC-------CCCCccccHHHHHHHHHHHHh-CCCCCCcccccc
Q 008012 431 HVSDFGISKLLGEGDDSV--IQTMTIATIGYMAPEFGSE-------GNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGE 500 (581)
Q Consensus 431 kl~Dfg~a~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~ 500 (581)
||+|||++.......... ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.......
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~ 247 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE 247 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH
Confidence 999999999875433221 1234579999999998865 678999999999999999999 999997643221
Q ss_pred ccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 501 MNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
...+...... +.... .....++.++.++|.+||+.||++|||+.|+++|
T Consensus 248 ---~~i~~~~~~~--~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 248 ---SNIIRGIFSL--DEMKC----------LHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp ---HHHHHTCCCC--CCCTT----------CCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---HHHhcCCCCc--ccccc----------cccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 2222221111 11000 0112456788999999999999999999999874
No 240
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=335.49 Aligned_cols=262 Identities=24% Similarity=0.254 Sum_probs=198.6
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc--hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCe----
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ--LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNF---- 361 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---- 361 (581)
..++|.+.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 3578999999999999999999965 7999999998654 34445678899999999999999999999987654
Q ss_pred --eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCce
Q 008012 362 --KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK 439 (581)
Q Consensus 362 --~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~ 439 (581)
.++||||++ ++|.+++.. .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||++.
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred eeEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeeccccc
Confidence 499999997 588887743 3789999999999999999999 8999999999999999999999999999998
Q ss_pred ecCCCCCcceeeccccCccccCCCCCCC-CCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcc
Q 008012 440 LLGEGDDSVIQTMTIATIGYMAPEFGSE-GNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKI 518 (581)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (581)
..... .....+++.|+|||++.+ ..++.++|||||||++|+|++|+.||...... ..+....... .......
T Consensus 175 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~-~~~~~~~ 247 (353)
T 3coi_A 175 HADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVT-GVPGTEF 247 (353)
T ss_dssp C-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHH-CBCCHHH
T ss_pred CCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh-CCCCHHH
Confidence 65322 234568999999998776 67899999999999999999999999763221 1111111111 0000000
Q ss_pred ----ccccc---hh------hhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 519 ----ADANL---LR------EENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 519 ----~~~~~---~~------~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.+... .. ..........++..+.+++.+||..||++|||++|+++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 00 000001112346678999999999999999999999986
No 241
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.2e-39 Score=333.77 Aligned_cols=263 Identities=19% Similarity=0.226 Sum_probs=201.1
Q ss_pred hcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcC-----------CCccceEeeeee
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-----------HRNLIKILSSCC 357 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~~iv~~~~~~~ 357 (581)
.++|++.+.||+|+||.||+|... +++.||+|++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 468999999999999999999964 78999999997653 33456788999999885 899999999987
Q ss_pred cCC----eeeEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CceecCCCCCCeEec------
Q 008012 358 NTN----FKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDVALALEYLHHGHST-PVVHCDLKPSNILLD------ 425 (581)
Q Consensus 358 ~~~----~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~L~~LH~~~~~-~i~H~dikp~Nill~------ 425 (581)
..+ ..++||||+ +++|.+++... ...+++..++.++.||+.||+||| ++ ||+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 654 789999999 88999999864 344799999999999999999999 77 999999999999995
Q ss_pred CCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-----
Q 008012 426 ENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGE----- 500 (581)
Q Consensus 426 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~----- 500 (581)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 3448999999999876432 233468999999999999999999999999999999999999997642211
Q ss_pred ccHHHHHHhhCCCCCCc---------------------cccccchh----hhhhhhHHHHHHHHHHHHHHhccCcCCCCC
Q 008012 501 MNLKNWVKESLPHGLPK---------------------IADANLLR----EENFFSARMDCLLSIFHLALDCCAELPDQR 555 (581)
Q Consensus 501 ~~~~~~~~~~~~~~~~~---------------------~~~~~~~~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 555 (581)
..+...+.. ... ++. +....... .......+..++..+.+||.+||+.||++|
T Consensus 248 ~~~~~~~~~-~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 325 (373)
T 1q8y_A 248 DHIAQIIEL-LGE-LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKR 325 (373)
T ss_dssp HHHHHHHHH-HCS-CCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTC
T ss_pred HHHHHHHHh-cCC-CCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCcccc
Confidence 111111111 110 000 00000000 000111234677889999999999999999
Q ss_pred CCHHHHHHH
Q 008012 556 LYMKDAATK 564 (581)
Q Consensus 556 ps~~evl~~ 564 (581)
||++|+++|
T Consensus 326 pt~~ell~h 334 (373)
T 1q8y_A 326 ADAGGLVNH 334 (373)
T ss_dssp BCHHHHHTC
T ss_pred CCHHHHhhC
Confidence 999999986
No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=338.50 Aligned_cols=253 Identities=23% Similarity=0.300 Sum_probs=191.1
Q ss_pred HhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeeeEEE
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ 366 (581)
....+|.+.+.||+|+||+||.....+++.||||++..... ..+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 21 i~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp ETTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 34456889999999999997655556799999999865432 2355799999999 8999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC-----CCcEEEeeccCceec
Q 008012 367 EFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE-----NMVAHVSDFGISKLL 441 (581)
Q Consensus 367 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~-----~~~~kl~Dfg~a~~~ 441 (581)
||++ |+|.+++...........++.++.||+.||+||| +.||+||||||+||+++. ...+||+|||++...
T Consensus 98 E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp ECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred ECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 9996 5999999877655566677899999999999999 899999999999999953 336889999999876
Q ss_pred CCCCCc-ceeeccccCccccCCCCCC---CCCCCccccHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHhhCCCCCC
Q 008012 442 GEGDDS-VIQTMTIATIGYMAPEFGS---EGNVSSKCDVYSYGILLLETFT-RKKPTDEMFTGEMNLKNWVKESLPHGLP 516 (581)
Q Consensus 442 ~~~~~~-~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~vl~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 516 (581)
...... .......||+.|+|||++. ...++.++|||||||++|||++ |..||...... ..... ......
T Consensus 174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---~~~~~---~~~~~~ 247 (432)
T 3p23_A 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---QANIL---LGACSL 247 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---HHHHH---TTCCCC
T ss_pred cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---HHHHH---hccCCc
Confidence 533221 2234457999999999987 4577889999999999999999 99998643211 11111 111100
Q ss_pred ccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 517 KIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
.... .....+..+.++|.+||+.||++|||++|+++|
T Consensus 248 ~~~~-----------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 248 DCLH-----------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TTSC-----------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccC-----------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 0000 011334557899999999999999999999965
No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.3e-40 Score=331.43 Aligned_cols=247 Identities=25% Similarity=0.268 Sum_probs=200.9
Q ss_pred hhHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchHH------HHHHHHHHHHHHHhcC--CCccceEee
Q 008012 284 LDLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQ------AFRSFNSECEVLRNVR--HRNLIKILS 354 (581)
Q Consensus 284 ~~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~~iv~~~~ 354 (581)
.+.+...++|++.+.||+|+||.||+|... +++.||+|++...... ....+.+|+.++++++ ||||+++++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~ 115 (320)
T 3a99_A 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD 115 (320)
T ss_dssp ----CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEE
T ss_pred cccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEE
Confidence 344556788999999999999999999954 7899999998765311 1235667999999996 599999999
Q ss_pred eeecCCeeeEEEeccCC-CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCcEEE
Q 008012 355 SCCNTNFKALVLEFMPN-GSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLD-ENMVAHV 432 (581)
Q Consensus 355 ~~~~~~~~~lv~e~~~~-~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~-~~~~~kl 432 (581)
++...+..++|||++.+ ++|.+++...+ .+++..++.++.||+.||+||| +.||+||||||+||+++ +++.+||
T Consensus 116 ~~~~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL 191 (320)
T 3a99_A 116 WFERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKL 191 (320)
T ss_dssp EEECSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEE
T ss_pred EEecCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEE
Confidence 99999999999999976 89999998754 3788999999999999999999 89999999999999999 7899999
Q ss_pred eeccCceecCCCCCcceeeccccCccccCCCCCCCCCC-CccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhC
Q 008012 433 SDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNV-SSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESL 511 (581)
Q Consensus 433 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 511 (581)
+|||++....... .....|++.|+|||++.+..+ +.++||||||+++|||++|+.||.... .......
T Consensus 192 ~Dfg~~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~~~ 260 (320)
T 3a99_A 192 IDFGSGALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRGQV 260 (320)
T ss_dssp CCCTTCEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHCCC
T ss_pred eeCcccccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhcccc
Confidence 9999998765322 234568999999998876665 678999999999999999999996521 1111110
Q ss_pred CCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 512 PHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..+ ..+++.+.++|.+||+.||++|||++|++++
T Consensus 261 --~~~-----------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 261 --FFR-----------------QRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp --CCS-----------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --ccc-----------------ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 1234568899999999999999999999985
No 244
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=328.09 Aligned_cols=246 Identities=27% Similarity=0.306 Sum_probs=192.8
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccchH------HHHHHHHHHHHHHHhc----CCCccceEe
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE------QAFRSFNSECEVLRNV----RHRNLIKIL 353 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l----~h~~iv~~~ 353 (581)
+.+...++|++.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.++.++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 44556788999999999999999999964 789999999975532 1233466799999999 899999999
Q ss_pred eeeecCCeeeEEEec-cCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEec-CCCcEE
Q 008012 354 SSCCNTNFKALVLEF-MPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLD-ENMVAH 431 (581)
Q Consensus 354 ~~~~~~~~~~lv~e~-~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~-~~~~~k 431 (581)
+++...+..++|||| +.+++|.+++...+. +++..++.++.||+.||+||| +.||+||||||+||+++ .++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKGP-LGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHCS-CCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 789999999987553 789999999999999999999 88999999999999999 889999
Q ss_pred EeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCC-ccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhh
Q 008012 432 VSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVS-SKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKES 510 (581)
Q Consensus 432 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~ 510 (581)
|+|||++....... .....|+..|+|||++.+..+. .++||||||+++|+|++|+.||.... ......
T Consensus 181 l~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~~ 249 (312)
T 2iwi_A 181 LIDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILEAE 249 (312)
T ss_dssp ECCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHTC
T ss_pred EEEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhhhc
Confidence 99999998765432 2345689999999988766664 58999999999999999999997521 111111
Q ss_pred CCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 511 LPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
..++ ..++..+.++|.+||+.||++|||++|++++
T Consensus 250 --~~~~-----------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 250 --LHFP-----------------AHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp --CCCC-----------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --cCCc-----------------ccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0111 1234568899999999999999999999985
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.8e-39 Score=347.43 Aligned_cols=264 Identities=22% Similarity=0.271 Sum_probs=198.7
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeec------CC
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCN------TN 360 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~ 360 (581)
..++|++.+.||+|+||.||+|... +|+.||+|+++.. .....+.+.+|++++++++||||+++++++.. .+
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 3478999999999999999999964 7899999998765 34556779999999999999999999998765 66
Q ss_pred eeeEEEeccCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCc---EEEeec
Q 008012 361 FKALVLEFMPNGSLDKWLYSHN--YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMV---AHVSDF 435 (581)
Q Consensus 361 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~---~kl~Df 435 (581)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccc
Confidence 7899999999999999998643 25788999999999999999999 899999999999999997664 999999
Q ss_pred cCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCC-
Q 008012 436 GISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHG- 514 (581)
Q Consensus 436 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~- 514 (581)
|.+........ .....|++.|+|||++.+..++.++|||||||++|+|++|+.||...... ..|........
T Consensus 169 G~a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----~~~~~~i~~~~~ 241 (676)
T 3qa8_A 169 GYAKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP----VQWHGKVREKSN 241 (676)
T ss_dssp CCCCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH----HHSSTTCC----
T ss_pred ccccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch----hhhhhhhhcccc
Confidence 99987654322 23457899999999999999999999999999999999999999753211 11100000000
Q ss_pred ----CCccccccc--hhh-hhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHH
Q 008012 515 ----LPKIADANL--LRE-ENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAA 562 (581)
Q Consensus 515 ----~~~~~~~~~--~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 562 (581)
......... ... .........++..+.+++.+||..||++|||+.|++
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 000000000 000 000011224667899999999999999999999854
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.5e-38 Score=312.35 Aligned_cols=235 Identities=13% Similarity=0.051 Sum_probs=188.0
Q ss_pred hhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeE
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKAL 364 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 364 (581)
..++|++.+.||+|+||.||+|.+. +++.||+|++.... ....+.+.+|+..+++++||||+++++++.+.+..|+
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 3478999999999999999999975 68999999997652 4455788999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCC
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEG 444 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~ 444 (581)
||||++|++|.+++... ....++..++.|++.||+||| +.||+||||||+||+++.++.+||+++|
T Consensus 109 v~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 99999999999999643 355678899999999999999 8999999999999999999999998544
Q ss_pred CCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccch
Q 008012 445 DDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLL 524 (581)
Q Consensus 445 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (581)
|++ .++.++|||||||++|||+||+.||............ . .......
T Consensus 175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---------~-~~~~~~~- 222 (286)
T 3uqc_A 175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---------E-RDTAGQP- 222 (286)
T ss_dssp --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---------C-BCTTSCB-
T ss_pred --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---------H-HHhccCC-
Confidence 222 3688999999999999999999999864322110000 0 0000000
Q ss_pred hhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHHHHHhHHHH
Q 008012 525 REENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATKLKKIRDKF 572 (581)
Q Consensus 525 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 572 (581)
.........+++.+.+++.+||+.||++| |+.|+++.|+++....
T Consensus 223 --~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 223 --IEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp --CCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred --CChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 00011223456778999999999999999 9999999999987543
No 247
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=9.6e-38 Score=309.35 Aligned_cols=232 Identities=19% Similarity=0.270 Sum_probs=182.1
Q ss_pred hhcCCCcC-CeecccccccEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHH-HhcCCCccceEeeeeec----CCe
Q 008012 289 ATDGFNEC-NLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVL-RNVRHRNLIKILSSCCN----TNF 361 (581)
Q Consensus 289 ~~~~y~~~-~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~~iv~~~~~~~~----~~~ 361 (581)
..++|.+. +.||+|+||.||+|... +++.||+|+++.. ..+.+|+.++ +..+||||+++++++.. ...
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 34667777 77999999999999964 7899999999754 3456788888 55599999999999876 677
Q ss_pred eeEEEeccCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC---CCcEEEeeccC
Q 008012 362 KALVLEFMPNGSLDKWLYSHN-YFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE---NMVAHVSDFGI 437 (581)
Q Consensus 362 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~---~~~~kl~Dfg~ 437 (581)
.++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.||+||||||+||+++. ++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 899999999999999998754 35899999999999999999999 899999999999999997 78999999999
Q ss_pred ceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCc
Q 008012 438 SKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPK 517 (581)
Q Consensus 438 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 517 (581)
+.... +..++.++|||||||++|||++|+.||........ .... ...
T Consensus 167 a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~------~~~~---~~~ 213 (299)
T 3m2w_A 167 AKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI------SPGM---KTR 213 (299)
T ss_dssp CEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------------CCS---CCS
T ss_pred ccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh------hHHH---HHH
Confidence 87542 23567899999999999999999999976322110 0000 000
Q ss_pred cccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHHHHHH
Q 008012 518 IADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKDAATK 564 (581)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 564 (581)
+...... ........+++++.+++.+||+.||++|||+.|+++|
T Consensus 214 ~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 214 IRMGQYE---FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SCTTCCS---SCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Hhhcccc---CCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000000 0011223456789999999999999999999999986
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.7e-38 Score=348.01 Aligned_cols=244 Identities=22% Similarity=0.298 Sum_probs=198.1
Q ss_pred hhcCCCcCCeecccccccEEEEEeC--CCcEEEEEEeccc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeecCCe----
Q 008012 289 ATDGFNECNLLGSGGFGSVYKGILS--DGTTVAIKIFNLQ-LEQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNF---- 361 (581)
Q Consensus 289 ~~~~y~~~~~lg~G~~~~v~~~~~~--~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---- 361 (581)
..++|++.+.||+|+||.||+|.+. +++.||||++... .......+.+|++++++++||||+++++++...+.
T Consensus 78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 3478999999999999999999975 6899999998644 34555678999999999999999999999987655
Q ss_pred -eeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 362 -KALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 362 -~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
.|+||||++|++|.+++.. .+++..++.++.||+.||.||| ++||+||||||+||+++.+ .+||+|||++..
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchh
Confidence 6999999999999998765 4799999999999999999999 8999999999999999885 899999999987
Q ss_pred cCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCcccc
Q 008012 441 LGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIAD 520 (581)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (581)
.... ....||+.|+|||++.+. ++.++|||||||++|+|++|.+||....... ++.
T Consensus 231 ~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~--------------~~~--- 286 (681)
T 2pzi_A 231 INSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG--------------LPE--- 286 (681)
T ss_dssp TTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS--------------CCT---
T ss_pred cccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc--------------ccc---
Confidence 6432 345689999999988765 4889999999999999999999876532111 000
Q ss_pred ccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCC-HHHHHHHHHHhHHHH
Q 008012 521 ANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLY-MKDAATKLKKIRDKF 572 (581)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~~L~~~~~~~ 572 (581)
.......++.+.++|.+||+.||++||+ ++++.+.|..+..+.
T Consensus 287 ---------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 287 ---------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp ---------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred ---------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 0111234467889999999999999995 666677777665443
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-38 Score=330.02 Aligned_cols=251 Identities=16% Similarity=0.151 Sum_probs=186.4
Q ss_pred HhhcCCCcCCeecccccccEEEEEeC-CCcEEEEEEeccch---HHHHHHHHHHHHHHHhcCC-CccceEe---------
Q 008012 288 RATDGFNECNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQL---EQAFRSFNSECEVLRNVRH-RNLIKIL--------- 353 (581)
Q Consensus 288 ~~~~~y~~~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~~iv~~~--------- 353 (581)
.....|...+.||+|+||.||+|.+. +|+.||||+++... ....+.+.+|+.+++.++| ++...+.
T Consensus 75 ~~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~ 154 (413)
T 3dzo_A 75 ERPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 154 (413)
T ss_dssp SCCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCC
T ss_pred CCceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccch
Confidence 34455778889999999999999954 79999999987432 2235678899999999976 3221111
Q ss_pred ------------eeeec-----CCeeeEEEeccCCCCHHHHHh------hCCCCCCHHHHHHHHHHHHHHHHHHhcCCCC
Q 008012 354 ------------SSCCN-----TNFKALVLEFMPNGSLDKWLY------SHNYFQDIPDRLNIMIDVALALEYLHHGHST 410 (581)
Q Consensus 354 ------------~~~~~-----~~~~~lv~e~~~~~~L~~~l~------~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~ 410 (581)
.++.. ....+++|+++ +++|.+++. ..+..+++..++.++.||++||+||| ++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~ 230 (413)
T 3dzo_A 155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HY 230 (413)
T ss_dssp EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HT
T ss_pred hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 11111 12456777766 679999985 22344677889999999999999999 89
Q ss_pred CceecCCCCCCeEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCC----------CCCCCCccccHHHHH
Q 008012 411 PVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFG----------SEGNVSSKCDVYSYG 480 (581)
Q Consensus 411 ~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~Dv~slG 480 (581)
||+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++||||||
T Consensus 231 ~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlG 304 (413)
T 3dzo_A 231 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLG 304 (413)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHH
T ss_pred CcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHH
Confidence 9999999999999999999999999999865322 334467 999999988 666788999999999
Q ss_pred HHHHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHHHHHHhccCcCCCCCCCHHH
Q 008012 481 ILLLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIFHLALDCCAELPDQRLYMKD 560 (581)
Q Consensus 481 ~vl~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 560 (581)
|++|||++|+.||........ ...+.. ....+++.+.++|.+||+.||++|||+.|
T Consensus 305 vil~elltg~~Pf~~~~~~~~-------------~~~~~~-----------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ 360 (413)
T 3dzo_A 305 LAIYWIWCADLPNTDDAALGG-------------SEWIFR-----------SCKNIPQPVRALLEGFLRYPKEDRLLPLQ 360 (413)
T ss_dssp HHHHHHHHSSCCCCTTGGGSC-------------SGGGGS-----------SCCCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHHHHHHCCCCCCCcchhhh-------------HHHHHh-----------hcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 999999999999976422111 000000 00123466889999999999999999998
Q ss_pred HHHH--HHHhHHHH
Q 008012 561 AATK--LKKIRDKF 572 (581)
Q Consensus 561 vl~~--L~~~~~~~ 572 (581)
++++ ++++.+..
T Consensus 361 ~l~~~~~~~~~~~~ 374 (413)
T 3dzo_A 361 AMETPEYEQLRTEL 374 (413)
T ss_dssp HTTSHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHH
Confidence 8765 44444433
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.1e-38 Score=317.47 Aligned_cols=245 Identities=18% Similarity=0.218 Sum_probs=184.9
Q ss_pred hcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccch--------HHHHHHHHHHHHHHHhcC---------CCccceE
Q 008012 290 TDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQL--------EQAFRSFNSECEVLRNVR---------HRNLIKI 352 (581)
Q Consensus 290 ~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~~iv~~ 352 (581)
.++|++.+.||+|+||.||+|++ +|+.||||++.... ....+.+.+|++++++++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788999999999999999998 58999999997652 122357888999998886 5555555
Q ss_pred eee-----------------eec-------------CCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHH
Q 008012 353 LSS-----------------CCN-------------TNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE 402 (581)
Q Consensus 353 ~~~-----------------~~~-------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~ 402 (581)
.++ +.+ .+..++||||+++|++.+.+.+ ..+++..++.++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 433 6789999999999977666644 34789999999999999999
Q ss_pred HHhcCCCCCceecCCCCCCeEecCCC--------------------cEEEeeccCceecCCCCCcceeeccccCccccCC
Q 008012 403 YLHHGHSTPVVHCDLKPSNILLDENM--------------------VAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 462 (581)
Q Consensus 403 ~LH~~~~~~i~H~dikp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP 462 (581)
|||+ +.||+||||||+|||++.++ .+||+|||+|+..... ...||+.|+||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDE 246 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCS
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccCh
Confidence 9993 47899999999999999887 9999999999876422 34789999999
Q ss_pred CCCCCCCCCccccHHHHHHH-HHHHHhCCCCCCccccccccHHHHHHhhCCCCCCccccccchhhhhhhhHHHHHHHHHH
Q 008012 463 EFGSEGNVSSKCDVYSYGIL-LLETFTRKKPTDEMFTGEMNLKNWVKESLPHGLPKIADANLLREENFFSARMDCLLSIF 541 (581)
Q Consensus 463 E~~~~~~~~~~~Dv~slG~v-l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 541 (581)
|++.+.. +.++||||+|++ .+++++|..||....... .....+...... .. .........+++++.
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~--~~---------~~~~~~~~~~s~~~~ 313 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLH-YLTDKMLKQMTF--KT---------KCNTPAMKQIKRKIQ 313 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHH-HHHHHHHHTCCC--SS---------CCCSHHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhh-HHHHhhhhhhcc--Cc---------ccchhhhhhcCHHHH
Confidence 9998766 889999998777 788999999985310000 011111111000 00 001123346788899
Q ss_pred HHHHhccCcCCCCCCCHHHHH-HH
Q 008012 542 HLALDCCAELPDQRLYMKDAA-TK 564 (581)
Q Consensus 542 ~li~~cl~~dP~~Rps~~evl-~~ 564 (581)
+||.+||+.| |++|++ +|
T Consensus 314 dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 314 EFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHhccC-----CHHHHHhcC
Confidence 9999999976 999998 54
No 251
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=1.5e-31 Score=266.25 Aligned_cols=209 Identities=31% Similarity=0.514 Sum_probs=141.0
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCC-CCcE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALE-YILY 81 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~ 81 (581)
++++|++|+|++|++++.+|..|.++++|++|+|++|.|++..|..|..+++|++|+|++|++++.+|..+..++ +|++
T Consensus 99 ~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~ 178 (313)
T 1ogq_A 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTS 178 (313)
T ss_dssp GCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCE
T ss_pred cCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcE
Confidence 344455555555555444444455555555555555555544445555555555555555555444454555544 5555
Q ss_pred EecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeecccccc
Q 008012 82 VNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNL 161 (581)
Q Consensus 82 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l 161 (581)
|++++|++++..|..+..++ |++|++++|.+++..|..|.++++|+.|+|++|.+++..|. +..+++|++|+|++|.+
T Consensus 179 L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l 256 (313)
T 1ogq_A 179 MTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRI 256 (313)
T ss_dssp EECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCC
T ss_pred EECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcc
Confidence 55555555544455555444 55555555555555666667777777777777777755544 77788899999999999
Q ss_pred CCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCCC
Q 008012 162 SEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 162 ~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
++..|..+..+++|+.|++++|++++.+|....+..+..+.+.+|++.|+.|
T Consensus 257 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 257 YGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp EECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred cCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 8889999999999999999999999999998889999999999999999975
No 252
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=5.6e-31 Score=293.97 Aligned_cols=230 Identities=34% Similarity=0.577 Sum_probs=191.9
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcE
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILY 81 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 81 (581)
+.+++|++|+|++|++++.+|..+.++++|++|+|++|++++..|..|..+++|++|+|++|++++.+|..+..+++|+.
T Consensus 463 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 542 (768)
T 3rgz_A 463 MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIW 542 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCE
T ss_pred cCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCE
Confidence 35677788888888887777888888888888888888888778888888888888888888888788888888888888
Q ss_pred EecccCcCCCCCCccc----------------------------------------------------------------
Q 008012 82 VNLSSNYLTGSLTSDI---------------------------------------------------------------- 97 (581)
Q Consensus 82 L~l~~n~l~~~~~~~~---------------------------------------------------------------- 97 (581)
|++++|.+++.+|..+
T Consensus 543 L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g 622 (768)
T 3rgz_A 543 LDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGG 622 (768)
T ss_dssp EECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEE
T ss_pred EECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecc
Confidence 8888888776665433
Q ss_pred ------cCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhc
Q 008012 98 ------QNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVA 171 (581)
Q Consensus 98 ------~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 171 (581)
..++.|++|+|++|++++.+|..++++++|+.|+|++|+++|.+|..|+.+++|+.|+|++|++++.+|..+..
T Consensus 623 ~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~ 702 (768)
T 3rgz_A 623 HTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702 (768)
T ss_dssp ECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGG
T ss_pred cCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhC
Confidence 33577889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCCCCCCCCCCCcccccccchheee
Q 008012 172 LSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGPQRLQVPPCKEDKNKGFKKVALL 234 (581)
Q Consensus 172 l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~~~p~c~~~~~~~~~~~~~~ 234 (581)
+++|+.|++++|+++|.+|..+.+..+....+.+||+.||++ .++|......++.++...
T Consensus 703 l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~---l~~C~~~~~~~~~~~~~~ 762 (768)
T 3rgz_A 703 LTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPSNADGYAHHQRS 762 (768)
T ss_dssp CCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT---SCCCCSCC----------
T ss_pred CCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC---CcCCCCCccCCCCCCCCc
Confidence 999999999999999999999889999999999999999986 348988888777665443
No 253
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=1.4e-31 Score=286.30 Aligned_cols=186 Identities=18% Similarity=0.080 Sum_probs=132.8
Q ss_pred eecccccccEEEEE-eCCCcEEEEEEeccc----------hHHHHHHHHHHHHHHHhc-CCCccceEeeeeecCCeeeEE
Q 008012 298 LLGSGGFGSVYKGI-LSDGTTVAIKIFNLQ----------LEQAFRSFNSECEVLRNV-RHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 298 ~lg~G~~~~v~~~~-~~~~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 365 (581)
..+.|++|.+..++ .-.|+.+++|++... .+...+.+.+|+++|+++ .|+||+++++++.+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35666777666655 336899999999653 234456799999999999 799999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||++|++|.+++.+.+. ++.. +|+.||+.||+|+| ++||+||||||+|||++++|++||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~~-l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEE-IDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTCC-CCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCCC-CCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 999999999999987654 4543 58999999999999 8999999999999999999999999999998764332
Q ss_pred CcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCC
Q 008012 446 DSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPT 493 (581)
Q Consensus 446 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf 493 (581)
. ......||+.|+|||++.+ .+..++|+||+|++++++.++..|+
T Consensus 394 ~--~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 394 S--WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp C--CSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred c--cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 2 2345679999999999876 5677899999999998887765543
No 254
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=3e-28 Score=239.31 Aligned_cols=210 Identities=23% Similarity=0.227 Sum_probs=194.3
Q ss_pred CCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCc-ccCCCCcccccCCCCcEE
Q 008012 4 MQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNK-LTSSIPSALWALEYILYV 82 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L 82 (581)
.++|++|+|++|+|+++.+..|..+++|++|+|++|.|++..+..|.++++|++|+|++|+ +++..|..|..+++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4689999999999998888889999999999999999998889999999999999999997 887778999999999999
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccC
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLS 162 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~ 162 (581)
++++|.+++..+..+..+++|++|++++|.+++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 99999999888889999999999999999999777777999999999999999999877778999999999999999999
Q ss_pred CCCchhhhcccccCeeEccCCCCCCCCCC-CCCCcCCccccccccccccCCC
Q 008012 163 EGIPKSLVALSHLKQFNVSHNRLEGEIPT-EGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 163 ~~~~~~~~~l~~L~~l~l~~n~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
+..|..+..+++|+.|++++|++++.++. ...+..+..+++.+|++.|+-.
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 98899999999999999999999976654 4678889999999999999754
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.95 E-value=1.5e-28 Score=244.59 Aligned_cols=205 Identities=23% Similarity=0.444 Sum_probs=107.0
Q ss_pred CCCCCcEEEeec-CcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcE
Q 008012 3 RMQQLQGIGLAD-NHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILY 81 (581)
Q Consensus 3 ~~~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 81 (581)
++++|++|+|++ |++++.+|..|+++++|++|+|++|.|++..|..|.++++|++|+|++|++++..|..+..+++|++
T Consensus 74 ~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 153 (313)
T 1ogq_A 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVG 153 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCE
T ss_pred CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCe
Confidence 344555555553 5555455555555555555555555555445555555555555555555555455555555555555
Q ss_pred EecccCcCCCCCCccccCCc-cCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccc
Q 008012 82 VNLSSNYLTGSLTSDIQNMK-VLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNN 160 (581)
Q Consensus 82 L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~ 160 (581)
|++++|++++..|..+..++ .|++|++++|++++..|..+..++ |+.|+|++|.+++..|..|..+++|+.|+|++|.
T Consensus 154 L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 232 (313)
T 1ogq_A 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNS 232 (313)
T ss_dssp EECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSE
T ss_pred EECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCc
Confidence 55555555544555555554 555555555555545555555544 5555555555555555555555555555555555
Q ss_pred cCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCccccccccccc
Q 008012 161 LSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNYAL 209 (581)
Q Consensus 161 l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~ 209 (581)
+++..|. +..+++|+.|++++|++++.+|.. ..+..+..+++.+|...
T Consensus 233 l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 281 (313)
T 1ogq_A 233 LAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLC 281 (313)
T ss_dssp ECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEE
T ss_pred eeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCccc
Confidence 5543332 445555555555555555444432 34445555555555433
No 256
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=8.1e-28 Score=251.22 Aligned_cols=211 Identities=23% Similarity=0.289 Sum_probs=174.0
Q ss_pred CCCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCc
Q 008012 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYIL 80 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 80 (581)
|+++++|++|+|++|+|+++.+..|.++++|++|+|++|+|+...+..|.++++|++|+|++|+|++..+..|..+++|+
T Consensus 84 ~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 163 (440)
T 3zyj_A 84 FKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLR 163 (440)
T ss_dssp TSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCC
T ss_pred hhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccC
Confidence 45677778888888887776667777788888888888888766666777788888888888887766666777788888
Q ss_pred EEecccC-cCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeecccc
Q 008012 81 YVNLSSN-YLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSN 159 (581)
Q Consensus 81 ~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N 159 (581)
+|++++| .+....+..|.++++|++|+|++|.++ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 164 ~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 241 (440)
T 3zyj_A 164 RLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQS 241 (440)
T ss_dssp EEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC
T ss_pred EeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCC
Confidence 8888774 455444457888999999999999998 455 4888999999999999999888999999999999999999
Q ss_pred ccCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCccccccccccccCCC
Q 008012 160 NLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 213 (581)
.+++..+..|..+++|+.|+|++|++++..+.. ..+..+..+++.+|||.|+-.
T Consensus 242 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 242 QIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred ceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 999988999999999999999999999776654 678889999999999999743
No 257
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=1.2e-27 Score=250.80 Aligned_cols=210 Identities=24% Similarity=0.279 Sum_probs=149.3
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcE
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILY 81 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 81 (581)
+++++|++|+|++|+|+++.+..|.++++|++|+|++|+|+...+..|.++++|++|+|++|+|++..+..|.++++|++
T Consensus 96 ~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 175 (452)
T 3zyi_A 96 RHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMR 175 (452)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCE
T ss_pred CCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccE
Confidence 34555555555555555555555555555555555555555444445555555555555555555444445555555555
Q ss_pred Eeccc-CcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccc
Q 008012 82 VNLSS-NYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNN 160 (581)
Q Consensus 82 L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~ 160 (581)
|++++ |.+....+..|.++++|++|+|++|.+++ +| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|.
T Consensus 176 L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~ 253 (452)
T 3zyi_A 176 LDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQ 253 (452)
T ss_dssp EECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSC
T ss_pred EeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCc
Confidence 55555 23333333457778888888888888874 44 47888899999999999998888899999999999999999
Q ss_pred cCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCccccccccccccCCC
Q 008012 161 LSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 161 l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 213 (581)
+++..+..|..+++|+.|+|++|++++.++.. ..+..+..+++.+|||.|+-.
T Consensus 254 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 254 VSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 99888888999999999999999999766654 667888999999999999854
No 258
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=4e-28 Score=238.38 Aligned_cols=214 Identities=22% Similarity=0.229 Sum_probs=191.4
Q ss_pred CCCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCc-ccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCC
Q 008012 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNK-LNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYI 79 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 79 (581)
|+.+++|++|+|++|+++++.|..|.++++|++|+|++|. ++...+..|..+++|++|+|++|++++..|..+.++++|
T Consensus 52 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 131 (285)
T 1ozn_A 52 FRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAAL 131 (285)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred cccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCC
Confidence 4678999999999999998889999999999999999998 887779999999999999999999998889999999999
Q ss_pred cEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeecccc
Q 008012 80 LYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSN 159 (581)
Q Consensus 80 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N 159 (581)
++|++++|++++..+..|..+++|++|++++|.+++..+..|.++++|+.|+|++|.+++..|..|..+++|+.|++++|
T Consensus 132 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 132 QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 99999999999777778999999999999999999666667999999999999999999988999999999999999999
Q ss_pred ccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCCCC
Q 008012 160 NLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGPQR 214 (581)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 214 (581)
.+++..+..+..+++|+.|++++|++++..+....+..+.......+...|..|.
T Consensus 212 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 212 NLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp CCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESG
T ss_pred cCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCch
Confidence 9999777889999999999999999998665443334455555666777777653
No 259
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=2.5e-27 Score=232.75 Aligned_cols=205 Identities=27% Similarity=0.225 Sum_probs=185.6
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcE
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILY 81 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 81 (581)
+++++|++|++++|+++ .+|..+. ++|++|+|++|.|++..+..|.++++|++|+|++|+|++..+ ...+++|++
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 81 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGT 81 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCE
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCE
Confidence 56889999999999999 5776665 899999999999998888999999999999999999985433 378999999
Q ss_pred EecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeecccccc
Q 008012 82 VNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNL 161 (581)
Q Consensus 82 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l 161 (581)
|++++|+|+ .+|..+..+++|++|++++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++
T Consensus 82 L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 82 LDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 999999999 7788899999999999999999977778899999999999999999988888899999999999999999
Q ss_pred CCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCC
Q 008012 162 SEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGP 212 (581)
Q Consensus 162 ~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 212 (581)
+...+..|..+++|+.|+|++|+++..++.......+..+.+.+|||.|+-
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 987777788999999999999999976666667778899999999999973
No 260
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=9.9e-27 Score=226.41 Aligned_cols=205 Identities=26% Similarity=0.290 Sum_probs=186.4
Q ss_pred CCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecc
Q 008012 6 QLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLS 85 (581)
Q Consensus 6 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 85 (581)
+++.+++++++++ .+|..+. ++|++|+|++|+|+...+..|.++++|++|+|++|+|++..+..|..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 5789999999999 5777666 789999999999998878899999999999999999997777778999999999999
Q ss_pred cCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCC
Q 008012 86 SNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGI 165 (581)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 165 (581)
+|.+++..+..|..+++|++|++++|.+++..+..|.++++|+.|+|++|.|++..+..|..+++|+.|+|++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 99999877788899999999999999999888888999999999999999999877777999999999999999999887
Q ss_pred chhhhcccccCeeEccCCCCCCCCCC-CCCCcCCccccccccccccCCC
Q 008012 166 PKSLVALSHLKQFNVSHNRLEGEIPT-EGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 166 ~~~~~~l~~L~~l~l~~n~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
+..|..+++|+.|++++|++++..+. ...+..+..+.+.+|||.|+-.
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 78899999999999999999976665 3667889999999999999854
No 261
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=3.6e-27 Score=235.97 Aligned_cols=201 Identities=17% Similarity=0.269 Sum_probs=141.4
Q ss_pred CCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEe
Q 008012 4 MQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVN 83 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 83 (581)
.++|+.|+|++|+++ .+|..++++++|++|+|++|.|+ .+|..|.++++|++|+|++|+++ .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 356777777777777 56666777777777777777777 66777777777777777777776 6677777777777777
Q ss_pred cccCcCCCCCCccccC---------CccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCcccccee
Q 008012 84 LSSNYLTGSLTSDIQN---------MKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESL 154 (581)
Q Consensus 84 l~~n~l~~~~~~~~~~---------l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L 154 (581)
+++|++.+.+|..+.. +++|++|++++|.++ .+|..+.++++|+.|+|++|++++ +|..+..+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 7777666666665543 777777777777777 666677777777777777777774 44557777777777
Q ss_pred eccccccCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCccccccccccc
Q 008012 155 DLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNYAL 209 (581)
Q Consensus 155 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~ 209 (581)
+|++|.+.+.+|..+..+++|+.|++++|++.+.+|.. ..+..+..+++.+|+..
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 77777777777777777777777777777766666643 55666666677666543
No 262
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.95 E-value=3.1e-27 Score=263.79 Aligned_cols=207 Identities=31% Similarity=0.485 Sum_probs=125.8
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
.+++|++|+|++|++++.+|..+..+++|++|+|++|++++..|..|.++++|++|+|++|++++.+|.+++.+++|++|
T Consensus 440 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 519 (768)
T 3rgz_A 440 SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAIL 519 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred cCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEE
Confidence 34455555555555555555555555555555555555555555555555555555565555555555555556666666
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccc-----------------------------------------
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTI----------------------------------------- 121 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~----------------------------------------- 121 (581)
++++|++++.+|..+..+++|++|++++|.+++.+|..+
T Consensus 520 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (768)
T 3rgz_A 520 KLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGI 599 (768)
T ss_dssp ECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTC
T ss_pred ECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccc
Confidence 666666555555556666666666666665554444332
Q ss_pred -----------------------------cCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhcc
Q 008012 122 -----------------------------AGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVAL 172 (581)
Q Consensus 122 -----------------------------~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 172 (581)
..+++|+.|+|++|+++|.+|..|+.+++|+.|+|++|.+++.+|..++.+
T Consensus 600 ~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L 679 (768)
T 3rgz_A 600 RSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDL 679 (768)
T ss_dssp CGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred cchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCC
Confidence 223455666666666666666666667777777777777776677777777
Q ss_pred cccCeeEccCCCCCCCCCCC-CCCcCCccccccccccc
Q 008012 173 SHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNYAL 209 (581)
Q Consensus 173 ~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~ 209 (581)
++|+.|+|++|++++.+|.. ..+..+..+++++|+..
T Consensus 680 ~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 680 RGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp TTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 77777777777777666654 55566666667666544
No 263
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=6.3e-28 Score=254.48 Aligned_cols=206 Identities=22% Similarity=0.169 Sum_probs=161.4
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCc-----------
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPS----------- 71 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----------- 71 (581)
.+++|++|+|++|+|++..|..|+.+++|++|+|++|.|++..| |..+++|++|+|++|.|++..+.
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N 109 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANN 109 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSS
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCC
Confidence 35689999999999998888899999999999999999996655 89999999999999988743211
Q ss_pred -----ccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCccccc-CcccccceeccccccccccCccc
Q 008012 72 -----ALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIA-GLKDLTNLSLAGNQFQGPIPESF 145 (581)
Q Consensus 72 -----~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~l~~N~i~~~~~~~~ 145 (581)
....+++|+.|+|++|.|++..|..+..+++|++|+|++|.+++..|..+. .+++|+.|+|++|.|++..+ +
T Consensus 110 ~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~ 187 (487)
T 3oja_A 110 NISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--Q 187 (487)
T ss_dssp CCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--C
T ss_pred cCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--c
Confidence 112356777777888887777777777888888888888888876777665 67888888888888876522 3
Q ss_pred cCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCCC
Q 008012 146 GSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 146 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
..+++|+.|+|++|.+++. |..+..+++|+.|+|++|++++.++....+..+..+++.+|++.|+..
T Consensus 188 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~ 254 (487)
T 3oja_A 188 VVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTL 254 (487)
T ss_dssp CCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHH
T ss_pred ccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcch
Confidence 3578888888888888874 445888888888888888888755555677788888888888887744
No 264
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=7.5e-27 Score=228.16 Aligned_cols=208 Identities=21% Similarity=0.228 Sum_probs=187.5
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35999999999999887779999999999999999999888889999999999999999999888899999999999999
Q ss_pred ccCcCCCCCCccccCCccCcEEeCCCCcCCCC-CcccccCcccccceeccccccccccCccccCccccc----eeecccc
Q 008012 85 SSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGD-IPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLE----SLDLSSN 159 (581)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~----~L~l~~N 159 (581)
++|.+.+..+..+..+++|++|++++|.+++. +|..+.++++|+.|+|++|++++..+..|..+++|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99999987777899999999999999999864 589999999999999999999988888888888887 8999999
Q ss_pred ccCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCccccccccccccCCC
Q 008012 160 NLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 213 (581)
.+++..+..+ ...+|+.|++++|++++.++.. ..+..+..+.+.+|++.|+-+
T Consensus 188 ~l~~~~~~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 188 PMNFIQPGAF-KEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCCEECTTSS-CSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cccccCcccc-CCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 9997655544 4458999999999999776654 678899999999999999754
No 265
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=4e-27 Score=233.78 Aligned_cols=208 Identities=22% Similarity=0.277 Sum_probs=112.3
Q ss_pred CCCCCcEEEeecCccccc--CCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCC-cccccCCCC
Q 008012 3 RMQQLQGIGLADNHLQGS--IPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIP-SALWALEYI 79 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L 79 (581)
++++|++|+|++|+++.. .+..+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|++++..+ ..+..+++|
T Consensus 50 ~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 128 (306)
T 2z66_A 50 KLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 128 (306)
T ss_dssp TCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTC
T ss_pred ccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCC
Confidence 344444444444444411 1333334444444444444444 234445555555555555555553333 345555566
Q ss_pred cEEecccCcCCCCCCccccCCccCcEEeCCCCcCCC-CCcccccCcccccceeccccccccccCccccCccccceeeccc
Q 008012 80 LYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSG-DIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSS 158 (581)
Q Consensus 80 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~ 158 (581)
++|++++|.+.+..+..+..+++|++|++++|.+++ ..|..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++
T Consensus 129 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 208 (306)
T 2z66_A 129 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208 (306)
T ss_dssp CEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCC
Confidence 666666666555555555556666666666666553 3455556666666666666666655555566666666666666
Q ss_pred cccCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCC-cCCccccccccccccC
Q 008012 159 NNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPF-RNFSAQSFHWNYALCG 211 (581)
Q Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~-~~~~~~~~~~n~~~c~ 211 (581)
|.+++..+..+..+++|+.|++++|++++..+.. ..+ ..+..+++.+|++.|+
T Consensus 209 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 209 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 6665555555556666666666666665554433 233 2555566666666555
No 266
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.94 E-value=2.2e-26 Score=241.71 Aligned_cols=213 Identities=23% Similarity=0.248 Sum_probs=131.0
Q ss_pred CCCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCcc--ccCCCCCCEEEccCCcccCCCCcc-cccCC
Q 008012 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTC--LASLTSLRELRLNSNKLTSSIPSA-LWALE 77 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~ 77 (581)
|+.+++|++|+|++|++++..|..|+++++|++|+|++|.|++..+.. |.++++|++|+|++|++++..|.. +.+++
T Consensus 75 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~ 154 (455)
T 3v47_A 75 FRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMR 154 (455)
T ss_dssp TTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCT
T ss_pred ccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCC
Confidence 345667777777777777666666777777777777777766533333 666666666666666666554544 55666
Q ss_pred CCcEEecccCcCCCCC----------------------------------------------------------------
Q 008012 78 YILYVNLSSNYLTGSL---------------------------------------------------------------- 93 (581)
Q Consensus 78 ~L~~L~l~~n~l~~~~---------------------------------------------------------------- 93 (581)
+|++|++++|.+++..
T Consensus 155 ~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~ 234 (455)
T 3v47_A 155 RFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFD 234 (455)
T ss_dssp TCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHH
T ss_pred cccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhc
Confidence 6666666666555433
Q ss_pred ---------------------------------------------------------CccccCCccCcEEeCCCCcCCCC
Q 008012 94 ---------------------------------------------------------TSDIQNMKVLIDLDLSRNQLSGD 116 (581)
Q Consensus 94 ---------------------------------------------------------~~~~~~l~~L~~L~l~~N~l~~~ 116 (581)
+..+..+++|++|++++|.+++.
T Consensus 235 ~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 314 (455)
T 3v47_A 235 AIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKI 314 (455)
T ss_dssp HTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred cccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCccccc
Confidence 33344455566666666666555
Q ss_pred CcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCC
Q 008012 117 IPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPF 195 (581)
Q Consensus 117 ~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~ 195 (581)
.|..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|.+++..|..+..+++|+.|++++|++++.++.. ..+
T Consensus 315 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 394 (455)
T 3v47_A 315 DDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRL 394 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred ChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccC
Confidence 5555666666666666666666555566666666666666666666655666666666666666666666544433 455
Q ss_pred cCCccccccccccccCCC
Q 008012 196 RNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 196 ~~~~~~~~~~n~~~c~~~ 213 (581)
..+..+++.+|++.|+-+
T Consensus 395 ~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 395 TSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCCEEECCSSCBCCCTT
T ss_pred CcccEEEccCCCcccCCC
Confidence 666666666666666644
No 267
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=1.2e-27 Score=254.48 Aligned_cols=186 Identities=17% Similarity=0.177 Sum_probs=146.5
Q ss_pred CcCCeecccccccEEEEEeCCCcEEEEEEeccch--------HHHHHHHHHHHHHHHhcCCCccceEeeeeecCCeeeEE
Q 008012 294 NECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQL--------EQAFRSFNSECEVLRNVRHRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 294 ~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 365 (581)
...+.||+|+||.||+|... ++.+++|...... ....+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 34578999999999999654 7889999764321 12245689999999999999999666665677778999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCC
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGD 445 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~ 445 (581)
|||+++++|.+++.. +..++.|+++||+||| ++||+||||||+|||++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999876 4579999999999999 899999999999999998 99999999999875432
Q ss_pred Ccc-----eeeccccCccccCCCCCCC--CCCCccccHHHHHHHHHHHHhCCCCCC
Q 008012 446 DSV-----IQTMTIATIGYMAPEFGSE--GNVSSKCDVYSYGILLLETFTRKKPTD 494 (581)
Q Consensus 446 ~~~-----~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~vl~el~tg~~Pf~ 494 (581)
... ......||+.|+|||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 211 1235579999999999877 568888999999999999888887764
No 268
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=8.8e-26 Score=219.68 Aligned_cols=187 Identities=22% Similarity=0.240 Sum_probs=173.0
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
++|++|+|++|+|+++.+..|.++++|++|+|++|.|+...+..|.++++|++|+|++|++++..+..|..+++|++|++
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 46999999999999877789999999999999999999877788899999999999999999887888999999999999
Q ss_pred ccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCC
Q 008012 85 SSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEG 164 (581)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~ 164 (581)
++|.+++..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|.+++.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 196 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcC
Confidence 99999988888899999999999999999976666789999999999999999988788899999999999999999987
Q ss_pred CchhhhcccccCeeEccCCCCCCCCCC
Q 008012 165 IPKSLVALSHLKQFNVSHNRLEGEIPT 191 (581)
Q Consensus 165 ~~~~~~~l~~L~~l~l~~n~l~~~~~~ 191 (581)
.+..+..+++|+.|++++|++.+..+.
T Consensus 197 ~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 197 PEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred CHHHhccccCCCEEEecCCCeeCCCcc
Confidence 777799999999999999999876653
No 269
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.94 E-value=3.4e-26 Score=228.90 Aligned_cols=201 Identities=23% Similarity=0.309 Sum_probs=184.7
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCccccc------
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWA------ 75 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------ 75 (581)
+++++|++|+|++|+++ .+|..++++++|++|+|++|.|+ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~ 178 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGE 178 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCC
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhh
Confidence 45889999999999999 89999999999999999999999 77999999999999999999888888887665
Q ss_pred ---CCCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccc
Q 008012 76 ---LEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLE 152 (581)
Q Consensus 76 ---l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~ 152 (581)
+++|++|++++|+++ .+|..+..+++|++|+|++|.++ .+|..+.++++|+.|+|++|++.+.+|..|..+++|+
T Consensus 179 ~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~ 256 (328)
T 4fcg_A 179 HQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLK 256 (328)
T ss_dssp EEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCC
T ss_pred hccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCC
Confidence 999999999999999 78888999999999999999999 5777899999999999999999999999999999999
Q ss_pred eeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCcccccccc
Q 008012 153 SLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWN 206 (581)
Q Consensus 153 ~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n 206 (581)
.|+|++|.+.+.+|..+..+++|+.|++++|++.+.+|.. ..+..+....+..+
T Consensus 257 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp EEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred EEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 9999999999999999999999999999999999988875 56666666666544
No 270
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.94 E-value=2.7e-26 Score=242.45 Aligned_cols=211 Identities=20% Similarity=0.225 Sum_probs=122.0
Q ss_pred CCCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCc
Q 008012 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYIL 80 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 80 (581)
|+++++|++|+|++|+|+++.|..|.++++|++|+|++|+|+...+..|.++++|++|+|++|++++..+..|..+++|+
T Consensus 52 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 131 (477)
T 2id5_A 52 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLK 131 (477)
T ss_dssp TTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCC
Confidence 34566666777776666666666666666666666666666655555566666666666666666655555555666666
Q ss_pred EEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcc-----------------------------------------
Q 008012 81 YVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPK----------------------------------------- 119 (581)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~----------------------------------------- 119 (581)
+|++++|.+++..+..|..+++|++|+|++|.+++..+.
T Consensus 132 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 132 SLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp EEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCT
T ss_pred EEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCc
Confidence 666666655544444555555555555555544432222
Q ss_pred -------------------------------cccCcccccceeccccccccccCccccCccccceeeccccccCCCCchh
Q 008012 120 -------------------------------TIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKS 168 (581)
Q Consensus 120 -------------------------------~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 168 (581)
.+.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++..|..
T Consensus 212 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 291 (477)
T 2id5_A 212 YLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYA 291 (477)
T ss_dssp TCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTT
T ss_pred cccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHH
Confidence 2333444445555555555444444555555555555555555555555
Q ss_pred hhcccccCeeEccCCCCCCCCCCC-CCCcCCccccccccccccC
Q 008012 169 LVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNYALCG 211 (581)
Q Consensus 169 ~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~ 211 (581)
|..+++|+.|++++|++++..+.. ..+..+..+.+.+|++.|+
T Consensus 292 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 292 FRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp BTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred hcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 666666666666666666544432 4455566666666666665
No 271
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=9.5e-27 Score=235.91 Aligned_cols=208 Identities=23% Similarity=0.205 Sum_probs=141.6
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
++|++|+|++|+|+++.+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|++
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 46778888888887666667777888888888888887777777778888888888888887555555777788888888
Q ss_pred ccCcCCCCCC-ccccCCccCcEEeCCCC-cCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccC
Q 008012 85 SSNYLTGSLT-SDIQNMKVLIDLDLSRN-QLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLS 162 (581)
Q Consensus 85 ~~n~l~~~~~-~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~ 162 (581)
++|+++...+ ..+..+++|++|++++| .+++..+..|.++++|+.|++++|.+++..|..|..+++|++|++++|.++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 8887774443 36777778888888777 355555566777777777777777777766777766666666666555554
Q ss_pred CCC-------------------------------------------------------chhhhcccccCeeEccCCCCCC
Q 008012 163 EGI-------------------------------------------------------PKSLVALSHLKQFNVSHNRLEG 187 (581)
Q Consensus 163 ~~~-------------------------------------------------------~~~~~~l~~L~~l~l~~n~l~~ 187 (581)
... |..+..+++|+.|++++|+++.
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~ 291 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS 291 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc
Confidence 321 2234455666666666666664
Q ss_pred CCCCC-CCCcCCccccccccccccCC
Q 008012 188 EIPTE-GPFRNFSAQSFHWNYALCGP 212 (581)
Q Consensus 188 ~~~~~-~~~~~~~~~~~~~n~~~c~~ 212 (581)
.++.. ..+..+..+++.+|++.|+.
T Consensus 292 i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 292 VPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 33332 45566666666666666654
No 272
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.93 E-value=3.6e-25 Score=212.87 Aligned_cols=183 Identities=23% Similarity=0.240 Sum_probs=169.1
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
...+++++++++++ .+|..+. ++|+.|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 35689999999999 6777776 79999999999999988889999999999999999999888888999999999999
Q ss_pred ccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCC
Q 008012 85 SSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEG 164 (581)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~ 164 (581)
++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999988888899999999999999999977777789999999999999999988777899999999999999999988
Q ss_pred CchhhhcccccCeeEccCCCCCCCCC
Q 008012 165 IPKSLVALSHLKQFNVSHNRLEGEIP 190 (581)
Q Consensus 165 ~~~~~~~l~~L~~l~l~~n~l~~~~~ 190 (581)
.+..+..+++|+.|++++|++++...
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 88889999999999999999997643
No 273
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.93 E-value=3e-25 Score=228.09 Aligned_cols=88 Identities=22% Similarity=0.187 Sum_probs=41.7
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
.+++|++|+|++|++++..|..|+++++|++|+|++|+|+...+..|.++++|++|+|++|++++..+..+..+++|++|
T Consensus 91 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 170 (390)
T 3o6n_A 91 YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 170 (390)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEE
T ss_pred CCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEE
Confidence 34444445554444444444444444555555555554443333334444555555555555444444444444444444
Q ss_pred ecccCcCC
Q 008012 83 NLSSNYLT 90 (581)
Q Consensus 83 ~l~~n~l~ 90 (581)
++++|.++
T Consensus 171 ~l~~n~l~ 178 (390)
T 3o6n_A 171 QLSSNRLT 178 (390)
T ss_dssp ECCSSCCS
T ss_pred ECCCCcCC
Confidence 44444443
No 274
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.2e-25 Score=240.48 Aligned_cols=107 Identities=20% Similarity=0.274 Sum_probs=51.5
Q ss_pred ccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEc
Q 008012 101 KVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNV 180 (581)
Q Consensus 101 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 180 (581)
++|++|+|++|.+++..|..|.++++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++. +|..+..+++|+.|+|
T Consensus 254 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L 331 (597)
T 3oja_B 254 PGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYL 331 (597)
T ss_dssp TTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEEC
T ss_pred CCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEEC
Confidence 334444444444443334444444444444444444442 23333344455555555555542 4444555555555555
Q ss_pred cCCCCCCCCCCCCCCcCCccccccccccccC
Q 008012 181 SHNRLEGEIPTEGPFRNFSAQSFHWNYALCG 211 (581)
Q Consensus 181 ~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~ 211 (581)
++|++++.. ...+..+..+++.+|++.|.
T Consensus 332 ~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 332 DHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCCcC--hhhcCCCCEEEeeCCCCCCh
Confidence 555555432 23345566666666666665
No 275
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.93 E-value=8.9e-26 Score=245.93 Aligned_cols=212 Identities=22% Similarity=0.219 Sum_probs=193.0
Q ss_pred CCCCCCCcEEEeecCccccc--CCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCC-cccccCC
Q 008012 1 MGRMQQLQGIGLADNHLQGS--IPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIP-SALWALE 77 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~ 77 (581)
++.+++|++|+|++|++++. .|..+..+++|++|+|++|.+++ .|..|.++++|++|+|++|++++..| ..+..++
T Consensus 346 ~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 424 (606)
T 3vq2_A 346 KVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLE 424 (606)
T ss_dssp CCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCT
T ss_pred hccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccc
Confidence 35688999999999999866 38889999999999999999995 66899999999999999999998777 6899999
Q ss_pred CCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCC-CCcccccCcccccceeccccccccccCccccCccccceeec
Q 008012 78 YILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSG-DIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDL 156 (581)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l 156 (581)
+|++|++++|.+.+..|..+..+++|++|++++|.+++ ..|..+.++++|+.|+|++|++++..|..|..+++|+.|+|
T Consensus 425 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 504 (606)
T 3vq2_A 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNM 504 (606)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEEC
Confidence 99999999999998889999999999999999999987 47889999999999999999999988999999999999999
Q ss_pred cccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCc-CCccccccccccccCCC
Q 008012 157 SSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFR-NFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 157 ~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~-~~~~~~~~~n~~~c~~~ 213 (581)
++|++++..|..+..+++|+.|++++|+++..++....+. .+..+++.+||+.|+-+
T Consensus 505 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 505 SHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred CCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 9999999889999999999999999999996555555554 58899999999999765
No 276
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.93 E-value=3.1e-25 Score=232.95 Aligned_cols=121 Identities=20% Similarity=0.186 Sum_probs=106.0
Q ss_pred CCCCCCCcEEEeecCccccc-CCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcc--cccCC
Q 008012 1 MGRMQQLQGIGLADNHLQGS-IPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSA--LWALE 77 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~l~ 77 (581)
|+++++|++|+|++|.+.+. .+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..+.. |..++
T Consensus 50 ~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~ 129 (455)
T 3v47_A 50 FSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLT 129 (455)
T ss_dssp TSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCT
T ss_pred hccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcc
Confidence 56899999999999999744 4678999999999999999999888999999999999999999998755544 99999
Q ss_pred CCcEEecccCcCCCCCCcc-ccCCccCcEEeCCCCcCCCCCcccc
Q 008012 78 YILYVNLSSNYLTGSLTSD-IQNMKVLIDLDLSRNQLSGDIPKTI 121 (581)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~l~~N~l~~~~~~~~ 121 (581)
+|++|+|++|.+++..|.. +..+++|++|++++|.+++..+..+
T Consensus 130 ~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l 174 (455)
T 3v47_A 130 SLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDL 174 (455)
T ss_dssp TCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTS
T ss_pred cCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhh
Confidence 9999999999999877776 7889999999999998876555433
No 277
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4.1e-25 Score=215.75 Aligned_cols=191 Identities=23% Similarity=0.238 Sum_probs=172.7
Q ss_pred CCCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCc
Q 008012 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYIL 80 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 80 (581)
|+.+++|++|+|++|+++++.+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..+..+++|+
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 127 (276)
T 2z62_A 48 FFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 127 (276)
T ss_dssp TTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCC
T ss_pred hccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCC
Confidence 46789999999999999988888999999999999999999988889999999999999999999987777899999999
Q ss_pred EEecccCcCCCC-CCccccCCccCcEEeCCCCcCCCCCcccccCccccc----ceeccccccccccCccccCccccceee
Q 008012 81 YVNLSSNYLTGS-LTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLT----NLSLAGNQFQGPIPESFGSLISLESLD 155 (581)
Q Consensus 81 ~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~----~L~l~~N~i~~~~~~~~~~l~~L~~L~ 155 (581)
+|++++|.+++. +|..+..+++|++|++++|++++..+..+..+++|+ .|++++|++++..+..+. ..+|+.|+
T Consensus 128 ~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~ 206 (276)
T 2z62_A 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELA 206 (276)
T ss_dssp EEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEE
T ss_pred EEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEE
Confidence 999999999864 588999999999999999999977778888888887 899999999976666554 45899999
Q ss_pred ccccccCCCCchhhhcccccCeeEccCCCCCCCCCCC
Q 008012 156 LSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE 192 (581)
Q Consensus 156 l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~ 192 (581)
|++|.+++..+..+..+++|+.|++++|++++..+..
T Consensus 207 L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 207 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred CCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 9999999877777899999999999999999877653
No 278
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.92 E-value=1.9e-25 Score=243.28 Aligned_cols=211 Identities=20% Similarity=0.225 Sum_probs=168.3
Q ss_pred CCCCCCcEEEeecCcccccC--CccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCc-ccccCCC
Q 008012 2 GRMQQLQGIGLADNHLQGSI--PYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPS-ALWALEY 78 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~ 78 (581)
+.+++|++|+|++|++++.. +..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+. .+..+++
T Consensus 347 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 426 (606)
T 3t6q_A 347 ENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHL 426 (606)
T ss_dssp TTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTT
T ss_pred hccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCccc
Confidence 45677788888888777654 66777888888888888888877778888888888888888888766544 4778888
Q ss_pred CcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCC---CcccccCcccccceeccccccccccCccccCccccceee
Q 008012 79 ILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGD---IPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLD 155 (581)
Q Consensus 79 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~---~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~ 155 (581)
|++|++++|.+++..+..+..+++|++|++++|.+++. .+..+..+++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 427 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 506 (606)
T 3t6q_A 427 LKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVD 506 (606)
T ss_dssp CCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEE
Confidence 88888888888877777888888888888888888752 235678888888888888888887788888888888888
Q ss_pred ccccccCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCccccccccccccCCC
Q 008012 156 LSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 156 l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 213 (581)
|++|++++..|..+..+++| .|++++|++++.+|.. ..+..+..+++.+||+.|+-+
T Consensus 507 Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 507 LSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 88888888888888888888 8888888888776654 566778888889999888643
No 279
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=7.6e-26 Score=225.00 Aligned_cols=203 Identities=24% Similarity=0.258 Sum_probs=174.3
Q ss_pred CCCCCcEEEeecCcccccCCccc--cCCCCCCEEEccCCcccccCCccccCC-----CCCCEEEccCCcccCCCCccccc
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDL--CQLKRLNSLSLQGNKLNGSIPTCLASL-----TSLRELRLNSNKLTSSIPSALWA 75 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~l~~n~i~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~ 75 (581)
++++|++|+|++|++++..|..+ ..+++|++|+|++|+|++. |..|..+ ++|++|+|++|+|++..|..|..
T Consensus 93 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~ 171 (312)
T 1wwl_A 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRV 171 (312)
T ss_dssp TTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCC
T ss_pred CcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhcc
Confidence 58899999999999998888876 8999999999999999976 8888877 99999999999999888899999
Q ss_pred CCCCcEEecccCcCCCC--CCccc--cCCccCcEEeCCCCcCCCC--Cc-ccccCcccccceeccccccccccC-ccccC
Q 008012 76 LEYILYVNLSSNYLTGS--LTSDI--QNMKVLIDLDLSRNQLSGD--IP-KTIAGLKDLTNLSLAGNQFQGPIP-ESFGS 147 (581)
Q Consensus 76 l~~L~~L~l~~n~l~~~--~~~~~--~~l~~L~~L~l~~N~l~~~--~~-~~~~~l~~L~~L~l~~N~i~~~~~-~~~~~ 147 (581)
+++|++|++++|++.+. .+..+ ..+++|++|++++|++++. .+ ..+.++++|+.|+|++|+|++..| ..+..
T Consensus 172 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 251 (312)
T 1wwl_A 172 FPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDW 251 (312)
T ss_dssp CSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCC
T ss_pred CCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhh
Confidence 99999999999998754 23344 8899999999999999831 12 334678999999999999998765 55677
Q ss_pred ccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCcccccccccccc
Q 008012 148 LISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALC 210 (581)
Q Consensus 148 l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c 210 (581)
+++|+.|+|++|.++ .+|..+. ++|+.|++++|++++. |....+..++.+++.+|++..
T Consensus 252 l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 252 PSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTTC
T ss_pred cCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCCC
Confidence 899999999999998 5777666 8999999999999976 557788889999999997653
No 280
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1e-24 Score=212.39 Aligned_cols=185 Identities=25% Similarity=0.269 Sum_probs=165.9
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
.+++|+.|++++|.++. + ..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++..+..|..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 114 (272)
T 3rfs_A 39 ELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKEL 114 (272)
T ss_dssp HHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred cccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEE
Confidence 46789999999999983 3 3588899999999999999953 578999999999999999998888888999999999
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccC
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLS 162 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~ 162 (581)
++++|++++..+..|..+++|++|++++|.+++..+..+.++++|+.|++++|++++..+..|..+++|+.|++++|.++
T Consensus 115 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 194 (272)
T 3rfs_A 115 VLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred ECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCC
Confidence 99999999888788899999999999999999777777899999999999999999888888899999999999999999
Q ss_pred CCCchhhhcccccCeeEccCCCCCCCCCC
Q 008012 163 EGIPKSLVALSHLKQFNVSHNRLEGEIPT 191 (581)
Q Consensus 163 ~~~~~~~~~l~~L~~l~l~~n~l~~~~~~ 191 (581)
+..+..+..+++|+.|++++|++.+..|.
T Consensus 195 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 195 SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 98888889999999999999999987664
No 281
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.92 E-value=1.2e-24 Score=218.18 Aligned_cols=206 Identities=25% Similarity=0.294 Sum_probs=131.4
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCccc------------------
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLT------------------ 66 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~------------------ 66 (581)
++|++|+|++|+|++..+..|+++++|++|+|++|.|++..|..|.++++|++|+|++|+++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~~L~~L~l~~n 131 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHEN 131 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCCTTCCEEECCSS
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhhcccccEEECCCC
Confidence 34566666666666554555666666666666666666555566666666666666666555
Q ss_pred ---CCCCcccccCCCCcEEecccCcCCC--CCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceecccccccccc
Q 008012 67 ---SSIPSALWALEYILYVNLSSNYLTG--SLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPI 141 (581)
Q Consensus 67 ---~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~ 141 (581)
+..+..|.++++|++|++++|.+.. ..+..+..+++|++|++++|.++ .+|..+. ++|+.|++++|.+++..
T Consensus 132 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 132 EITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVD 208 (330)
T ss_dssp CCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEEC
T ss_pred cccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccC
Confidence 3333345555556666666665542 34455556666666666666665 3444332 56777777777777666
Q ss_pred CccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCCC
Q 008012 142 PESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 142 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
+..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|+++..+.....+..+..+++.+|+....+.
T Consensus 209 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 209 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcCCccCh
Confidence 777778888888888888887766667778888888888888887444445667777777787776655443
No 282
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.92 E-value=9.3e-26 Score=223.88 Aligned_cols=210 Identities=19% Similarity=0.223 Sum_probs=183.2
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCC-ccccCCCCCCEEEccCCcccCCCCcccccCCCCcE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIP-TCLASLTSLRELRLNSNKLTSSIPSALWALEYILY 81 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 81 (581)
.+++|++|+|++|.++ .+|..+..+++|++|+|++|+|++..+ ..|.++++|++|+|++|.+++..+..+..+++|++
T Consensus 76 ~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 154 (306)
T 2z66_A 76 GTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 154 (306)
T ss_dssp SCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCE
T ss_pred cccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCE
Confidence 4789999999999999 577889999999999999999996655 68999999999999999999888999999999999
Q ss_pred EecccCcCCC-CCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccc
Q 008012 82 VNLSSNYLTG-SLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNN 160 (581)
Q Consensus 82 L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~ 160 (581)
|++++|.+++ ..|..+..+++|++|++++|.+++..|..+.++++|+.|+|++|++++..+..+..+++|+.|+|++|.
T Consensus 155 L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 234 (306)
T 2z66_A 155 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 234 (306)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSC
T ss_pred EECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCC
Confidence 9999999986 578899999999999999999998778999999999999999999998888889999999999999999
Q ss_pred cCCCCchhhhccc-ccCeeEccCCCCCCCCCCC---CCCcCCccccccccccccCCC
Q 008012 161 LSEGIPKSLVALS-HLKQFNVSHNRLEGEIPTE---GPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 161 l~~~~~~~~~~l~-~L~~l~l~~n~l~~~~~~~---~~~~~~~~~~~~~n~~~c~~~ 213 (581)
+++..|..+..++ +|+.|++++|++++..+.. .-+.......+..+...|..|
T Consensus 235 l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p 291 (306)
T 2z66_A 235 IMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATP 291 (306)
T ss_dssp CCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEES
T ss_pred CcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCc
Confidence 9999999999985 9999999999999764421 111222333445566677655
No 283
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.92 E-value=5.9e-25 Score=230.35 Aligned_cols=206 Identities=23% Similarity=0.235 Sum_probs=186.0
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
++|++|+|++|+|+++.+..|.++++|++|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 57999999999999988999999999999999999999998999999999999999999999887888999999999999
Q ss_pred ccCcCCCCCCccccCCccCcEEeCCC-CcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCC
Q 008012 85 SSNYLTGSLTSDIQNMKVLIDLDLSR-NQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 163 (581)
++|+|+...+..|..+++|++|++++ |.+....+..|.++++|+.|+|++|++++. | .+..+++|+.|+|++|.+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 99999977777899999999999999 455544445789999999999999999964 4 58899999999999999999
Q ss_pred CCchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCccccccccccccCC
Q 008012 164 GIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNYALCGP 212 (581)
Q Consensus 164 ~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~ 212 (581)
..|..|..+++|+.|++++|++++..+.. ..+..+..+++.+|.....+
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 282 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLP 282 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccC
Confidence 99999999999999999999999876654 67788999999999766433
No 284
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.92 E-value=3e-25 Score=250.26 Aligned_cols=206 Identities=24% Similarity=0.256 Sum_probs=136.9
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcE
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILY 81 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 81 (581)
+.+++|++|+|++|+|++..|..|.++++|++|+|++|.|++..|..|.++++|+.|+|++|+|++..+..|..+++|++
T Consensus 287 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 366 (844)
T 3j0a_A 287 ETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQT 366 (844)
T ss_dssp SSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCE
T ss_pred hcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCE
Confidence 45667777777777777666667777777777777777777666677777777777777777776666666666777777
Q ss_pred EecccCcCCCCCC----------------------------------------ccccCCccCcEEeCCCCcCCCC-----
Q 008012 82 VNLSSNYLTGSLT----------------------------------------SDIQNMKVLIDLDLSRNQLSGD----- 116 (581)
Q Consensus 82 L~l~~n~l~~~~~----------------------------------------~~~~~l~~L~~L~l~~N~l~~~----- 116 (581)
|+|++|.+++... ..+..+++|++|+|++|++++.
T Consensus 367 L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 446 (844)
T 3j0a_A 367 LDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQT 446 (844)
T ss_dssp EEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSS
T ss_pred EECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccc
Confidence 7777666653110 0012445555555555555421
Q ss_pred -------------------------CcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhc
Q 008012 117 -------------------------IPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVA 171 (581)
Q Consensus 117 -------------------------~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 171 (581)
.+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|++++..+..+.
T Consensus 447 ~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~- 525 (844)
T 3j0a_A 447 PSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP- 525 (844)
T ss_dssp SCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-
T ss_pred cccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-
Confidence 123355666777777777777766666677777777777777777765555444
Q ss_pred ccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccC
Q 008012 172 LSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCG 211 (581)
Q Consensus 172 l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~ 211 (581)
++|+.|+|++|++++.+|.. +..+..+++.+|||.|+
T Consensus 526 -~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 526 -ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICE 562 (844)
T ss_dssp -SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCS
T ss_pred -ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccc
Confidence 66777777777777766654 55788899999999995
No 285
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.4e-24 Score=213.19 Aligned_cols=182 Identities=25% Similarity=0.221 Sum_probs=167.1
Q ss_pred CCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEe
Q 008012 4 MQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVN 83 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 83 (581)
.++|++|+|++|+|++..+..|..+++|++|+|++|.|++..+ ...+++|++|+|++|+|+ .+|..+..+++|++|+
T Consensus 30 ~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 30 PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 3579999999999998888999999999999999999996544 388999999999999998 7788899999999999
Q ss_pred cccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCC
Q 008012 84 LSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 84 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 163 (581)
+++|+|++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+++.
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ 186 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT 186 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc
Confidence 99999998888899999999999999999997777778999999999999999998777788999999999999999985
Q ss_pred CCchhhhcccccCeeEccCCCCCCCC
Q 008012 164 GIPKSLVALSHLKQFNVSHNRLEGEI 189 (581)
Q Consensus 164 ~~~~~~~~l~~L~~l~l~~n~l~~~~ 189 (581)
+|..+..+++|+.|+|++|++.+..
T Consensus 187 -ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 187 -IPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp -CCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred -cChhhcccccCCeEEeCCCCccCcC
Confidence 7888888899999999999998743
No 286
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=6.4e-25 Score=213.79 Aligned_cols=182 Identities=26% Similarity=0.292 Sum_probs=167.7
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcE
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILY 81 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 81 (581)
+.+++|++|+|++|++++. ..+..+++|++|+|++|.|++..+..|.++++|++|+|++|++++..+..|..+++|++
T Consensus 60 ~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 137 (272)
T 3rfs_A 60 QYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137 (272)
T ss_dssp GGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCE
Confidence 5689999999999999953 48999999999999999999888888999999999999999999888888999999999
Q ss_pred EecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeecccccc
Q 008012 82 VNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNL 161 (581)
Q Consensus 82 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l 161 (581)
|++++|++++..+..|..+++|++|++++|++++..+..+.++++|+.|+|++|++++..+..|..+++|+.|++++|.+
T Consensus 138 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (272)
T 3rfs_A 138 LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 217 (272)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCc
Confidence 99999999988888889999999999999999987777789999999999999999988888899999999999999999
Q ss_pred CCCCchhhhcccccCeeEccCCCCCCCCCCC
Q 008012 162 SEGIPKSLVALSHLKQFNVSHNRLEGEIPTE 192 (581)
Q Consensus 162 ~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~ 192 (581)
.+. +++|+.|+++.|.++|.+|..
T Consensus 218 ~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 218 DCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred ccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 863 457889999999999998875
No 287
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.92 E-value=9.8e-25 Score=227.85 Aligned_cols=207 Identities=24% Similarity=0.269 Sum_probs=185.8
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
++++.|+|++|+|+++.+..|.++++|++|+|++|.|+.+.+..|.++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 57999999999999888899999999999999999999888899999999999999999999777778999999999999
Q ss_pred ccCcCCCCCCccccCCccCcEEeCCCC-cCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCC
Q 008012 85 SSNYLTGSLTSDIQNMKVLIDLDLSRN-QLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 163 (581)
++|.|+...+..|..+++|++|++++| .+....+..|.++++|+.|+|++|+|+. +| .+..+++|+.|+|++|.+++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCc
Confidence 999999777779999999999999995 5554444578999999999999999994 44 48899999999999999999
Q ss_pred CCchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCccccccccccccCCC
Q 008012 164 GIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 164 ~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 213 (581)
..|..|..+++|+.|+|++|++++..+.. ..+..+..+++.+|.....++
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 272 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPH 272 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCT
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccCh
Confidence 88999999999999999999999876654 677889999999997664443
No 288
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.92 E-value=2.5e-24 Score=216.11 Aligned_cols=206 Identities=20% Similarity=0.221 Sum_probs=143.0
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 46777777777777666667777777777777777777666777777777777777777776 4444333 56677777
Q ss_pred ccCcCCCCCCccccCCccCcEEeCCCCcCCC--CCcccccCc--------------------ccccceeccccccccccC
Q 008012 85 SSNYLTGSLTSDIQNMKVLIDLDLSRNQLSG--DIPKTIAGL--------------------KDLTNLSLAGNQFQGPIP 142 (581)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~l--------------------~~L~~L~l~~N~i~~~~~ 142 (581)
++|++++..+..|..+++|++|++++|.++. ..+..+..+ ++|+.|++++|.+++..+
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~ 210 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIEL 210 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCT
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCH
Confidence 7776665555556666666666666666642 333333332 467777777777776666
Q ss_pred ccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCCC
Q 008012 143 ESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 143 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
..|..+++|+.|+|++|.+++..+..+..+++|+.|++++|+++..++....+..+..+++.+|.....+.
T Consensus 211 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~~~~~ 281 (332)
T 2ft3_A 211 EDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGV 281 (332)
T ss_dssp TSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCCCBCCT
T ss_pred HHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCCCccCh
Confidence 77778888888888888888777777888888888888888888444444667777788888777665544
No 289
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=6.4e-25 Score=209.55 Aligned_cols=197 Identities=16% Similarity=0.181 Sum_probs=171.6
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCc-ccccCCccccCCCCCCEEEccC-CcccCCCCcccccCCCCcEE
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNK-LNGSIPTCLASLTSLRELRLNS-NKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 82 (581)
++|++|+|++|+|+++.+..|.++++|++|+|++|+ |+.+.+..|.++++|++|+|++ |+|++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 379999999999998777799999999999999997 9988888999999999999998 99997777899999999999
Q ss_pred ecccCcCCCCCCccccCCccCc---EEeCCCC-cCCCCCcccccCccccc-ceeccccccccccCccccCccccceeecc
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLI---DLDLSRN-QLSGDIPKTIAGLKDLT-NLSLAGNQFQGPIPESFGSLISLESLDLS 157 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~---~L~l~~N-~l~~~~~~~~~~l~~L~-~L~l~~N~i~~~~~~~~~~l~~L~~L~l~ 157 (581)
++++|++++ +|. |..+++|+ +|++++| .+++..+..|.++++|+ .|++++|+++.+.+..|.. ++|+.|+|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 999999995 565 88888888 9999999 99866667799999999 9999999999555555555 899999999
Q ss_pred ccc-cCCCCchhhhcc-cccCeeEccCCCCCCCCCCCCCCcCCcccccccc
Q 008012 158 SNN-LSEGIPKSLVAL-SHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWN 206 (581)
Q Consensus 158 ~N~-l~~~~~~~~~~l-~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n 206 (581)
+|+ +++..+..|..+ ++|+.|++++|++++.++. .+..+..+.+.++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCc
Confidence 995 988778889999 9999999999999965444 5666776666544
No 290
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.92 E-value=1e-24 Score=240.75 Aligned_cols=211 Identities=25% Similarity=0.287 Sum_probs=146.3
Q ss_pred CCCCCcEEEeecCcccccCC-ccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCccc--CCCCcccccCCCC
Q 008012 3 RMQQLQGIGLADNHLQGSIP-YDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLT--SSIPSALWALEYI 79 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L 79 (581)
.+++|++|+|++|.+++.+| ..|.++++|++|+|++|++++..+..|..+++|+.|++++|.++ +..|..|.++++|
T Consensus 403 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L 482 (680)
T 1ziw_A 403 WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482 (680)
T ss_dssp TCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTC
T ss_pred CCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCC
Confidence 34455555555555543333 34555555555555555555455555555555555555555554 3556777778888
Q ss_pred cEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCC--------cccccCcccccceeccccccccccCccccCcccc
Q 008012 80 LYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDI--------PKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISL 151 (581)
Q Consensus 80 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~--------~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L 151 (581)
+.|++++|+|++..+..|..+++|++|++++|.+++.. +..|.++++|+.|+|++|+|+.+.+..|.++++|
T Consensus 483 ~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L 562 (680)
T 1ziw_A 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFEL 562 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCc
Confidence 88888888888766677788888888888888876431 1236778888888888888885555668888888
Q ss_pred ceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCC-C-CCcCCccccccccccccCCC
Q 008012 152 ESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-G-PFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 152 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~-~~~~~~~~~~~~n~~~c~~~ 213 (581)
+.|+|++|+++++.+..|..+++|+.|++++|++++..+.. . .+..+..+++.+|||.|+-.
T Consensus 563 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 563 KIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred ceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 88888888888766777788888888888888888766543 2 46778889999999999844
No 291
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.92 E-value=1.5e-24 Score=222.92 Aligned_cols=203 Identities=22% Similarity=0.231 Sum_probs=109.2
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
.+++|++|+|++|+|+++.+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|++++..+..|.++++|++|
T Consensus 67 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 67 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 146 (390)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEE
Confidence 35566666666666665555566666666666666666665555666666666666666666664444445666666666
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCc-------------------------------------c
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGL-------------------------------------K 125 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-------------------------------------~ 125 (581)
++++|.+++..+..|..+++|++|++++|.+++.....+.++ +
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 226 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNV 226 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCS
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccc
Confidence 666666665555556666666666666666653321111111 1
Q ss_pred cccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccc
Q 008012 126 DLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHW 205 (581)
Q Consensus 126 ~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~ 205 (581)
+|+.|++++|.+++. ..+..+++|+.|+|++|.+++..|..+..+++|+.|++++|++++.......+..+..+++.+
T Consensus 227 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~ 304 (390)
T 3o6n_A 227 ELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSH 304 (390)
T ss_dssp SCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCS
T ss_pred cccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCC
Confidence 122222222222211 234444555555555555555445555555555555555555554333334444555555555
Q ss_pred cc
Q 008012 206 NY 207 (581)
Q Consensus 206 n~ 207 (581)
|.
T Consensus 305 n~ 306 (390)
T 3o6n_A 305 NH 306 (390)
T ss_dssp SC
T ss_pred Cc
Confidence 43
No 292
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.2e-24 Score=236.10 Aligned_cols=205 Identities=22% Similarity=0.234 Sum_probs=132.8
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
.+++|++|+|++|.|+++.|..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|.|++..+..|.++++|++|
T Consensus 73 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 73 SFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTL 152 (597)
T ss_dssp HCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEE
Confidence 46677777777777776666677777777777777777777767777777777777777777775555556777777777
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCc-------------------------------------c
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGL-------------------------------------K 125 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-------------------------------------~ 125 (581)
+|++|.+++..|..|..+++|++|++++|.+++..+..+.++ +
T Consensus 153 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~ 232 (597)
T 3oja_B 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNV 232 (597)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCS
T ss_pred EeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCC
Confidence 777777776666677777777777777777764322222111 1
Q ss_pred cccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccc
Q 008012 126 DLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHW 205 (581)
Q Consensus 126 ~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~ 205 (581)
+|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++.++....+..+..+++.+
T Consensus 233 ~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~ 310 (597)
T 3oja_B 233 ELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSH 310 (597)
T ss_dssp CCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCS
T ss_pred CCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCC
Confidence 23333333333332 2345556666666666666666666666666666666666666665444444555666666666
Q ss_pred cccc
Q 008012 206 NYAL 209 (581)
Q Consensus 206 n~~~ 209 (581)
|...
T Consensus 311 N~l~ 314 (597)
T 3oja_B 311 NHLL 314 (597)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 6544
No 293
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=4.7e-25 Score=219.76 Aligned_cols=205 Identities=22% Similarity=0.188 Sum_probs=153.4
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCc-----------
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPS----------- 71 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----------- 71 (581)
.+++|++|+|++|+|++..|..|.++++|++|+|++|.|++..+ |..+++|++|+|++|+|++..+.
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n 109 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANN 109 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSS
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCC
Confidence 46789999999999998777899999999999999999986544 88999999999999988743211
Q ss_pred -----ccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccc-cCcccccceeccccccccccCccc
Q 008012 72 -----ALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTI-AGLKDLTNLSLAGNQFQGPIPESF 145 (581)
Q Consensus 72 -----~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~l~~N~i~~~~~~~~ 145 (581)
....+++|++|++++|++++..+..+..+++|++|++++|.+++..+..+ ..+++|+.|+|++|.|++. + ..
T Consensus 110 ~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~ 187 (317)
T 3o53_A 110 NISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQ 187 (317)
T ss_dssp CCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CC
T ss_pred ccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cc
Confidence 11234567777777777776666677777788888888888776555555 3677788888888887754 2 23
Q ss_pred cCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCC
Q 008012 146 GSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGP 212 (581)
Q Consensus 146 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 212 (581)
..+++|+.|+|++|.+++ +|..+..+++|+.|++++|++++.++....+..+..+++.+|++.|+.
T Consensus 188 ~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~~ 253 (317)
T 3o53_A 188 VVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGT 253 (317)
T ss_dssp CCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHHH
T ss_pred cccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCcC
Confidence 347788888888888876 444577888888888888888865555566777888888888887763
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.91 E-value=6.3e-24 Score=213.05 Aligned_cols=207 Identities=19% Similarity=0.269 Sum_probs=176.3
Q ss_pred CCCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCccccc---------------------CCccccCCCCCCEEE
Q 008012 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGS---------------------IPTCLASLTSLRELR 59 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~---------------------~~~~~~~l~~L~~L~ 59 (581)
|+++++|++|+|++|+++++.|..|.++++|++|+|++|+|+.. .+..|.++++|++|+
T Consensus 72 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 151 (330)
T 1xku_A 72 FKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE 151 (330)
T ss_dssp TTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEE
T ss_pred hccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChhhcccccEEECCCCcccccCHhHhcCCccccEEE
Confidence 46788888999999888877788888888888888888877632 233478899999999
Q ss_pred ccCCcccC--CCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceecccccc
Q 008012 60 LNSNKLTS--SIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQF 137 (581)
Q Consensus 60 L~~N~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i 137 (581)
|++|.++. ..+..+.++++|++|++++|.++ .+|..+. ++|++|++++|.+++..|..|.++++|+.|+|++|.+
T Consensus 152 l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 228 (330)
T 1xku_A 152 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI 228 (330)
T ss_dssp CCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCC
T ss_pred CCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcC
Confidence 99999964 67888999999999999999999 4555544 8999999999999988889999999999999999999
Q ss_pred ccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCC-------CCcCCcccccccccccc
Q 008012 138 QGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEG-------PFRNFSAQSFHWNYALC 210 (581)
Q Consensus 138 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~-------~~~~~~~~~~~~n~~~c 210 (581)
++..+..|..+++|+.|+|++|.++ .+|..+..+++|+.|++++|++++..+... ....+..+++.+||+.+
T Consensus 229 ~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 229 SAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred ceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 9888888999999999999999998 588889999999999999999997655431 23556678888999876
Q ss_pred C
Q 008012 211 G 211 (581)
Q Consensus 211 ~ 211 (581)
.
T Consensus 308 ~ 308 (330)
T 1xku_A 308 W 308 (330)
T ss_dssp G
T ss_pred c
Confidence 4
No 295
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.91 E-value=2.4e-24 Score=227.46 Aligned_cols=203 Identities=21% Similarity=0.214 Sum_probs=162.7
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
++|++|+|++|+|+++.+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 46888888888888777888888888888888888888877888888888888888888888666667888888888888
Q ss_pred ccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCC
Q 008012 85 SSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEG 164 (581)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~ 164 (581)
++|++++..+..|..+++|++|++++|.+++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|.+++.
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 88888877778888888888888888888877777888888888888888888876667788888888888888888877
Q ss_pred CchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCccccccccc
Q 008012 165 IPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNY 207 (581)
Q Consensus 165 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~ 207 (581)
.+..+..+++|+.|++++|++.+.++.. .....+..+++.+|.
T Consensus 192 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 235 (477)
T 2id5_A 192 RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCN 235 (477)
T ss_dssp CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSC
T ss_pred ChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCc
Confidence 7777888888888888887665555443 222345555555553
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.91 E-value=1.3e-23 Score=210.83 Aligned_cols=207 Identities=22% Similarity=0.257 Sum_probs=171.9
Q ss_pred CCCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCc
Q 008012 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYIL 80 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 80 (581)
|+++++|++|+|++|+|++..|..|+++++|++|+|++|+|+ .+|..+. ++|++|+|++|++++..+..|.++++|+
T Consensus 74 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~ 150 (332)
T 2ft3_A 74 FKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMN 150 (332)
T ss_dssp TTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCC
T ss_pred hhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCC
Confidence 467899999999999999888999999999999999999999 4454443 7888888888888876667788888888
Q ss_pred EEecccCcCCC--CCCccccCC--------------------ccCcEEeCCCCcCCCCCcccccCcccccceeccccccc
Q 008012 81 YVNLSSNYLTG--SLTSDIQNM--------------------KVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQ 138 (581)
Q Consensus 81 ~L~l~~n~l~~--~~~~~~~~l--------------------~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~ 138 (581)
+|++++|.++. ..+..+..+ ++|++|++++|.+++..+..+.++++|+.|+|++|+++
T Consensus 151 ~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~ 230 (332)
T 2ft3_A 151 CIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIR 230 (332)
T ss_dssp EEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCC
T ss_pred EEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCC
Confidence 88888888752 444444433 57888888888888777788999999999999999999
Q ss_pred cccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCC-------CCcCCccccccccccccC
Q 008012 139 GPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEG-------PFRNFSAQSFHWNYALCG 211 (581)
Q Consensus 139 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~-------~~~~~~~~~~~~n~~~c~ 211 (581)
+..+..|..+++|+.|+|++|.++ .+|..+..+++|+.|++++|++++..+... ....+..+.+.+||+.+.
T Consensus 231 ~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~ 309 (332)
T 2ft3_A 231 MIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYW 309 (332)
T ss_dssp CCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGG
T ss_pred cCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccccc
Confidence 888889999999999999999998 588889999999999999999997655431 134567788899998754
No 297
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=2.8e-24 Score=213.56 Aligned_cols=202 Identities=20% Similarity=0.213 Sum_probs=171.9
Q ss_pred CCCCcEEEeecCcccccCCccc--cCCCCCCEEEccCCcccccCC----ccccCCCCCCEEEccCCcccCCCCcccccCC
Q 008012 4 MQQLQGIGLADNHLQGSIPYDL--CQLKRLNSLSLQGNKLNGSIP----TCLASLTSLRELRLNSNKLTSSIPSALWALE 77 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~l~~n~i~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 77 (581)
+++|++|+|++|++++..|..+ ..+++|++|+|++|.|++..+ ..+..+++|++|+|++|++++..+..|..++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 3569999999999999999888 899999999999999997554 4456799999999999999988889999999
Q ss_pred CCcEEecccCcCCCC--C--CccccCCccCcEEeCCCCcCCCCCcc----cccCcccccceeccccccccccCccccCc-
Q 008012 78 YILYVNLSSNYLTGS--L--TSDIQNMKVLIDLDLSRNQLSGDIPK----TIAGLKDLTNLSLAGNQFQGPIPESFGSL- 148 (581)
Q Consensus 78 ~L~~L~l~~n~l~~~--~--~~~~~~l~~L~~L~l~~N~l~~~~~~----~~~~l~~L~~L~l~~N~i~~~~~~~~~~l- 148 (581)
+|++|+|++|++.+. . +..+..+++|++|+|++|+++ .++. .+.++++|+.|+|++|+|++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 999999999998642 2 223478999999999999997 4444 25788999999999999998878777776
Q ss_pred --cccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCcccccccccccc
Q 008012 149 --ISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALC 210 (581)
Q Consensus 149 --~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c 210 (581)
++|+.|+|++|+++. +|..+. ++|+.|+|++|++++. |....+..+..+.+.+|++..
T Consensus 249 ~~~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccEEECcCCCCCC
Confidence 699999999999985 676664 8999999999999964 445677889999999998653
No 298
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.91 E-value=2.1e-24 Score=218.56 Aligned_cols=180 Identities=22% Similarity=0.230 Sum_probs=159.6
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
+.....++++|+++ .+|..+. ++|++|+|++|.|++..+..|.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 44556899999999 6777666 69999999999999887779999999999999999999888889999999999999
Q ss_pred ccCcCCCCCCccccCCccCcEEeCCCCcCCCCCc-ccccCcccccceecccc-ccccccCccccCccccceeeccccccC
Q 008012 85 SSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIP-KTIAGLKDLTNLSLAGN-QFQGPIPESFGSLISLESLDLSSNNLS 162 (581)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N-~i~~~~~~~~~~l~~L~~L~l~~N~l~ 162 (581)
++|++++..+..|..+++|++|++++|++++..+ ..+.++++|+.|++++| .++...+..|..+++|+.|++++|.++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcC
Confidence 9999997666669999999999999999995433 37899999999999999 578777889999999999999999999
Q ss_pred CCCchhhhcccccCeeEccCCCCCC
Q 008012 163 EGIPKSLVALSHLKQFNVSHNRLEG 187 (581)
Q Consensus 163 ~~~~~~~~~l~~L~~l~l~~n~l~~ 187 (581)
+..|..+..+++|+.|++++|+++.
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~~ 212 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHIL 212 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCSTT
T ss_pred ccCHHHHhccccCCeecCCCCcccc
Confidence 9889999888888888888887753
No 299
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.90 E-value=1.9e-24 Score=235.79 Aligned_cols=205 Identities=24% Similarity=0.307 Sum_probs=184.4
Q ss_pred CCCCCCCcEEEeecCccccc-----------------CCcccc--CCCCCCEEEccCCcccccCCccccCCCCCCEEEcc
Q 008012 1 MGRMQQLQGIGLADNHLQGS-----------------IPYDLC--QLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLN 61 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~-----------------~~~~~~--~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~ 61 (581)
|+++++|++|+|++|++++. +|..++ ++++|++|+|++|.+.+.+|..|.++++|++|+|+
T Consensus 202 l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 281 (636)
T 4eco_A 202 VMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVA 281 (636)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECT
T ss_pred HhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECc
Confidence 46789999999999999975 899999 99999999999999999999999999999999999
Q ss_pred CCc-ccC-CCCcccccC------CCCcEEecccCcCCCCCCc--cccCCccCcEEeCCCCcCCCCCcccccCccccccee
Q 008012 62 SNK-LTS-SIPSALWAL------EYILYVNLSSNYLTGSLTS--DIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLS 131 (581)
Q Consensus 62 ~N~-l~~-~~~~~~~~l------~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 131 (581)
+|+ +++ .+|..++.+ ++|++|++++|+++ .+|. .++.+++|++|++++|.+++.+| .+.++++|+.|+
T Consensus 282 ~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~ 359 (636)
T 4eco_A 282 CNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLN 359 (636)
T ss_dssp TCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEE
T ss_pred CCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEE
Confidence 998 987 789888887 99999999999999 7888 89999999999999999998888 899999999999
Q ss_pred ccccccccccCccccCccc-cceeeccccccCCCCchhhhccc--ccCeeEccCCCCCCCCCCC-C-------CCcCCcc
Q 008012 132 LAGNQFQGPIPESFGSLIS-LESLDLSSNNLSEGIPKSLVALS--HLKQFNVSHNRLEGEIPTE-G-------PFRNFSA 200 (581)
Q Consensus 132 l~~N~i~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~--~L~~l~l~~n~l~~~~~~~-~-------~~~~~~~ 200 (581)
|++|+++ .+|..+..+++ |+.|++++|.++ .+|..+..+. +|+.|++++|++++.+|.. . ....+..
T Consensus 360 L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~ 437 (636)
T 4eco_A 360 LAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSS 437 (636)
T ss_dssp CCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEE
T ss_pred CCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCE
Confidence 9999999 78888999999 999999999998 5787777655 8999999999999877754 2 4456777
Q ss_pred ccccccccc
Q 008012 201 QSFHWNYAL 209 (581)
Q Consensus 201 ~~~~~n~~~ 209 (581)
+++.+|...
T Consensus 438 L~Ls~N~l~ 446 (636)
T 4eco_A 438 INLSNNQIS 446 (636)
T ss_dssp EECCSSCCC
T ss_pred EECcCCccC
Confidence 778777554
No 300
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=1.6e-23 Score=207.68 Aligned_cols=196 Identities=26% Similarity=0.352 Sum_probs=171.3
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
++++|++|++++|+++. ++ .+..+++|++|+|++|.|++..+ +..+++|++|+|++|++++. ..+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEE
Confidence 46789999999999984 55 68999999999999999996544 99999999999999999853 369999999999
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccC
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLS 162 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~ 162 (581)
++++|++++. + .+..+++|++|++++|.+++..+ +..+++|+.|+|++|.+++..+ +..+++|+.|++++|.++
T Consensus 113 ~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 9999999964 3 38999999999999999995433 8999999999999999996544 899999999999999998
Q ss_pred CCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCCC
Q 008012 163 EGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 163 ~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
+..+ +..+++|+.|++++|++++..+ ...+..+..+.+.+|++.+.+.
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEECCCE
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeecCCe
Confidence 7443 8899999999999999996654 6778889999999999877554
No 301
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=3e-23 Score=199.40 Aligned_cols=182 Identities=23% Similarity=0.288 Sum_probs=165.8
Q ss_pred CCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeC
Q 008012 29 KRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDL 108 (581)
Q Consensus 29 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 108 (581)
...+++++++|.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.|++..+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 46789999999999 5666665 68999999999999888889999999999999999999888888999999999999
Q ss_pred CCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCC
Q 008012 109 SRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGE 188 (581)
Q Consensus 109 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~ 188 (581)
++|.+++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999987778899999999999999999988778889999999999999999987777899999999999999999987
Q ss_pred CCC-CCCCcCCccccccccccccCCC
Q 008012 189 IPT-EGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 189 ~~~-~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
++. ...+..+..+.+.+|++.|...
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 764 4678899999999999999743
No 302
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.90 E-value=3.1e-24 Score=213.30 Aligned_cols=180 Identities=20% Similarity=0.188 Sum_probs=157.7
Q ss_pred CCCCCCcEEEeecCcccccCCccccCC-----CCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCC--CCccc-
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQL-----KRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSS--IPSAL- 73 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~- 73 (581)
+.+++|++|+|++|++++. |..++.+ ++|++|+|++|+|++..+..|.++++|++|+|++|++.+. .+..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 6789999999999999976 8888887 9999999999999988889999999999999999998754 23334
Q ss_pred -ccCCCCcEEecccCcCCCC---CCccccCCccCcEEeCCCCcCCCCCc-ccccCcccccceeccccccccccCccccCc
Q 008012 74 -WALEYILYVNLSSNYLTGS---LTSDIQNMKVLIDLDLSRNQLSGDIP-KTIAGLKDLTNLSLAGNQFQGPIPESFGSL 148 (581)
Q Consensus 74 -~~l~~L~~L~l~~n~l~~~---~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l 148 (581)
..+++|++|+|++|+|++. ....+..+++|++|++++|.+++..| ..+..+++|+.|+|++|.|+ .+|..+.
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 8899999999999999832 22345688999999999999997664 56677899999999999999 6777776
Q ss_pred cccceeeccccccCCCCchhhhcccccCeeEccCCCCCC
Q 008012 149 ISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEG 187 (581)
Q Consensus 149 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 187 (581)
++|+.|+|++|++++. |. +..+++|+.|++++|++++
T Consensus 274 ~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 8999999999999985 66 8999999999999999985
No 303
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=1.8e-24 Score=210.91 Aligned_cols=151 Identities=17% Similarity=0.140 Sum_probs=120.8
Q ss_pred hHHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchH------------------HHHHHHHHHHHHHHhcCC
Q 008012 285 DLERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLE------------------QAFRSFNSECEVLRNVRH 346 (581)
Q Consensus 285 ~~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~h 346 (581)
.+......|.+.+.||+|+||.||+|.+.+|+.||+|+++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 34444556777799999999999999997799999999965321 23467889999999999
Q ss_pred CccceEeeeeecCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecC
Q 008012 347 RNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDE 426 (581)
Q Consensus 347 ~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~ 426 (581)
| +++.+++.. +..++||||++|++|.+ +.. .....++.|++.||+||| +.||+||||||+|||++
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~- 227 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS- 227 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-
Confidence 4 566665543 55699999999999988 421 234579999999999999 89999999999999999
Q ss_pred CCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCC
Q 008012 427 NMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGS 466 (581)
Q Consensus 427 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 466 (581)
++.+||+|||+|... ..+.|||++.
T Consensus 228 ~~~vkl~DFG~a~~~---------------~~~~a~e~l~ 252 (282)
T 1zar_A 228 EEGIWIIDFPQSVEV---------------GEEGWREILE 252 (282)
T ss_dssp TTEEEECCCTTCEET---------------TSTTHHHHHH
T ss_pred CCcEEEEECCCCeEC---------------CCCCHHHHHH
Confidence 999999999999743 3467788654
No 304
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.90 E-value=1.2e-23 Score=229.19 Aligned_cols=188 Identities=21% Similarity=0.206 Sum_probs=175.0
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCC-ccccCCCCCCEEEccCCcccCCCCcccccCCCCc
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIP-TCLASLTSLRELRLNSNKLTSSIPSALWALEYIL 80 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 80 (581)
+.+++|++|+|++|.++ .+|..|..+++|++|++++|++++..+ ..|.++++|++|+|++|++++..|..+.++++|+
T Consensus 373 ~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 451 (606)
T 3vq2_A 373 LGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLN 451 (606)
T ss_dssp HCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCC
T ss_pred ccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCC
Confidence 46789999999999998 477899999999999999999998777 7899999999999999999998999999999999
Q ss_pred EEecccCcCCC-CCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeecccc
Q 008012 81 YVNLSSNYLTG-SLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSN 159 (581)
Q Consensus 81 ~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N 159 (581)
+|++++|.+++ ..|..+..+++|++|++++|.+++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|
T Consensus 452 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 452 TLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp EEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 99999999997 47889999999999999999999888899999999999999999999988999999999999999999
Q ss_pred ccCCCCchhhhccc-ccCeeEccCCCCCCCCCC
Q 008012 160 NLSEGIPKSLVALS-HLKQFNVSHNRLEGEIPT 191 (581)
Q Consensus 160 ~l~~~~~~~~~~l~-~L~~l~l~~n~l~~~~~~ 191 (581)
+++. +|..+..++ +|+.|++++|++.+..+.
T Consensus 532 ~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 532 RIET-SKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CCCC-EESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred cCcc-cCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9985 777798987 699999999999986664
No 305
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.90 E-value=3e-23 Score=225.96 Aligned_cols=160 Identities=19% Similarity=0.107 Sum_probs=101.8
Q ss_pred CCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecc
Q 008012 6 QLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLS 85 (581)
Q Consensus 6 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 85 (581)
++++|+|++|+|+++.|..|+++++|++|+|++|+|++..|.+|.++++|++|+|++|++++..|..|.++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 46666777777666666666666777777777776666666666666677777777666666666666666666666666
Q ss_pred cCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccc--eeeccccccCC
Q 008012 86 SNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLE--SLDLSSNNLSE 163 (581)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~--~L~l~~N~l~~ 163 (581)
+|.+++..+..+.++++|++|++++|.+++..+..+.++++|+.|++++|.+++..+..|+.+++|+ .|++++|.+++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 6666655555666666666666666666643333344466666666666666655555555555555 55555555544
Q ss_pred CC
Q 008012 164 GI 165 (581)
Q Consensus 164 ~~ 165 (581)
..
T Consensus 194 ~~ 195 (606)
T 3t6q_A 194 IE 195 (606)
T ss_dssp EC
T ss_pred cC
Confidence 33
No 306
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=8.8e-24 Score=234.88 Aligned_cols=185 Identities=20% Similarity=0.343 Sum_probs=161.9
Q ss_pred CCccccCCCCCCEEEccCCcccc-----------------cCCcccc--CCCCCCEEEccCCcccCCCCcccccCCCCcE
Q 008012 21 IPYDLCQLKRLNSLSLQGNKLNG-----------------SIPTCLA--SLTSLRELRLNSNKLTSSIPSALWALEYILY 81 (581)
Q Consensus 21 ~~~~~~~l~~L~~L~l~~n~i~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 81 (581)
+|..|+++++|++|+|++|+|++ .+|..++ ++++|++|+|++|++.+.+|..+.++++|++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 78889999999999999999997 3788877 9999999999999999999999999999999
Q ss_pred EecccCc-CCC-CCCccccCCc-------cCcEEeCCCCcCCCCCcc--cccCcccccceeccccccccccCccccCccc
Q 008012 82 VNLSSNY-LTG-SLTSDIQNMK-------VLIDLDLSRNQLSGDIPK--TIAGLKDLTNLSLAGNQFQGPIPESFGSLIS 150 (581)
Q Consensus 82 L~l~~n~-l~~-~~~~~~~~l~-------~L~~L~l~~N~l~~~~~~--~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~ 150 (581)
|+|++|+ +++ .+|..+..++ +|++|+|++|.++ .+|. .|.++++|+.|+|++|+|+ .+| .|+.+++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 9999998 887 6787666655 9999999999999 8888 8999999999999999999 677 8999999
Q ss_pred cceeeccccccCCCCchhhhcccc-cCeeEccCCCCCCCCCCC-CCC--cCCcccccccccccc
Q 008012 151 LESLDLSSNNLSEGIPKSLVALSH-LKQFNVSHNRLEGEIPTE-GPF--RNFSAQSFHWNYALC 210 (581)
Q Consensus 151 L~~L~l~~N~l~~~~~~~~~~l~~-L~~l~l~~n~l~~~~~~~-~~~--~~~~~~~~~~n~~~c 210 (581)
|+.|+|++|.++ .+|..+..+++ |+.|+|++|+++ .+|.. ... ..+..+++.+|...-
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g 658 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGS 658 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTT
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCC
Confidence 999999999998 68888999999 999999999999 55543 333 237778888876543
No 307
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.90 E-value=3.5e-23 Score=225.84 Aligned_cols=206 Identities=16% Similarity=0.219 Sum_probs=147.1
Q ss_pred CCCC-CcEEEeecCcccccCCccccCCC--CCCEEEccCCcccccCCcccc-------CCCCCCEEEccCCcccCCCCcc
Q 008012 3 RMQQ-LQGIGLADNHLQGSIPYDLCQLK--RLNSLSLQGNKLNGSIPTCLA-------SLTSLRELRLNSNKLTSSIPSA 72 (581)
Q Consensus 3 ~~~~-L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~l~~n~i~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~ 72 (581)
.+++ |++|+|++|+++ .+|..+..++ +|++|+|++|.|++..|..|. .+++|++|+|++|++++..+..
T Consensus 374 ~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~ 452 (636)
T 4eco_A 374 GFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKEL 452 (636)
T ss_dssp EECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHH
T ss_pred hhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHH
Confidence 4555 777777777776 5666665544 677777777777766676666 6667777777777777444444
Q ss_pred cccCCCCcEEecccCcCCCCCCccccCC-------ccCcEEeCCCCcCCCCCccccc--CcccccceeccccccccccCc
Q 008012 73 LWALEYILYVNLSSNYLTGSLTSDIQNM-------KVLIDLDLSRNQLSGDIPKTIA--GLKDLTNLSLAGNQFQGPIPE 143 (581)
Q Consensus 73 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l-------~~L~~L~l~~N~l~~~~~~~~~--~l~~L~~L~l~~N~i~~~~~~ 143 (581)
+..+++|++|+|++|+++...+..+..+ ++|++|+|++|.++ .+|..+. .+++|+.|+|++|+|++ +|.
T Consensus 453 ~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~ 530 (636)
T 4eco_A 453 FSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPT 530 (636)
T ss_dssp HHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCC
T ss_pred HccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cCh
Confidence 5567788888888888773333333322 27888888888887 6777776 78888888888888886 777
Q ss_pred cccCccccceeec------cccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCCC
Q 008012 144 SFGSLISLESLDL------SSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 144 ~~~~l~~L~~L~l------~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
.+..+++|+.|+| ++|.+.+.+|..+..+++|+.|++++|+++ .+|.... ..+..+++.+|++.|...
T Consensus 531 ~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~ip~~~~-~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 531 QPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKIT-PNISVLDIKDNPNISIDL 604 (636)
T ss_dssp GGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-BCCSCCC-TTCCEEECCSCTTCEEEC
T ss_pred hhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-ccCHhHh-CcCCEEECcCCCCccccH
Confidence 7778888888888 456677778888888888888888888884 5555422 677888888888877654
No 308
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=9.3e-24 Score=234.71 Aligned_cols=204 Identities=25% Similarity=0.292 Sum_probs=180.0
Q ss_pred CCCCCCCcEEEeecCcccc-----------------cCCcccc--CCCCCCEEEccCCcccccCCccccCCCCCCEEEcc
Q 008012 1 MGRMQQLQGIGLADNHLQG-----------------SIPYDLC--QLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLN 61 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~-----------------~~~~~~~--~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~ 61 (581)
|+++++|++|+|++|+|++ .+|..++ ++++|++|+|++|.+.+.+|..|.++++|+.|+|+
T Consensus 444 l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls 523 (876)
T 4ecn_A 444 IQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIA 523 (876)
T ss_dssp GGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECT
T ss_pred HhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECc
Confidence 4678999999999999997 3888877 99999999999999999999999999999999999
Q ss_pred CCc-ccC-CCCcccccCC-------CCcEEecccCcCCCCCCc--cccCCccCcEEeCCCCcCCCCCcccccCcccccce
Q 008012 62 SNK-LTS-SIPSALWALE-------YILYVNLSSNYLTGSLTS--DIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNL 130 (581)
Q Consensus 62 ~N~-l~~-~~~~~~~~l~-------~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 130 (581)
+|+ +++ .+|..+..++ +|+.|+|++|+++ .+|. .+.++++|++|+|++|.++ .+| .|.++++|+.|
T Consensus 524 ~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L 600 (876)
T 4ecn_A 524 CNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDL 600 (876)
T ss_dssp TCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEE
T ss_pred CCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEE
Confidence 998 987 7887776665 9999999999999 7888 8999999999999999999 788 89999999999
Q ss_pred eccccccccccCccccCccc-cceeeccccccCCCCchhhhcccc--cCeeEccCCCCCCCCCCCC------CCcCCccc
Q 008012 131 SLAGNQFQGPIPESFGSLIS-LESLDLSSNNLSEGIPKSLVALSH--LKQFNVSHNRLEGEIPTEG------PFRNFSAQ 201 (581)
Q Consensus 131 ~l~~N~i~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~~~~~l~~--L~~l~l~~n~l~~~~~~~~------~~~~~~~~ 201 (581)
+|++|+|+ .+|..+..+++ |+.|+|++|.++ .+|..+..+.. |+.|++++|++++.+|... ....+..+
T Consensus 601 ~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L 678 (876)
T 4ecn_A 601 KLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTV 678 (876)
T ss_dssp ECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEE
T ss_pred ECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEE
Confidence 99999999 78888999999 999999999998 57887777654 9999999999998776542 23356777
Q ss_pred cccccccc
Q 008012 202 SFHWNYAL 209 (581)
Q Consensus 202 ~~~~n~~~ 209 (581)
++.+|...
T Consensus 679 ~Ls~N~L~ 686 (876)
T 4ecn_A 679 TLSYNEIQ 686 (876)
T ss_dssp ECCSSCCC
T ss_pred EccCCcCC
Confidence 77777544
No 309
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.89 E-value=2e-23 Score=225.67 Aligned_cols=208 Identities=25% Similarity=0.284 Sum_probs=177.6
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccC--CccccCCCCCCEEEccCCcccCCCCcccccCCCCc
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSI--PTCLASLTSLRELRLNSNKLTSSIPSALWALEYIL 80 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 80 (581)
.+++|++|++++|.+.+..+. ..+++|++|++++|.+++.. +..+.++++|++|+|++|.+++.. ..+..+++|+
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~~l~~L~ 399 (570)
T 2z63_A 323 KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMS-SNFLGLEQLE 399 (570)
T ss_dssp BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEE-EEEETCTTCC
T ss_pred cccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccc-ccccccCCCC
Confidence 345666666666666544443 67889999999999998554 677889999999999999998554 4499999999
Q ss_pred EEecccCcCCCCCC-ccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccc-cccCccccCccccceeeccc
Q 008012 81 YVNLSSNYLTGSLT-SDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQ-GPIPESFGSLISLESLDLSS 158 (581)
Q Consensus 81 ~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~-~~~~~~~~~l~~L~~L~l~~ 158 (581)
+|++++|.+.+..+ ..+..+++|++|++++|.+.+..|..+.++++|+.|+|++|.++ +.+|..|..+++|+.|++++
T Consensus 400 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~ 479 (570)
T 2z63_A 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479 (570)
T ss_dssp EEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCC
Confidence 99999999987655 57889999999999999999888889999999999999999997 57889999999999999999
Q ss_pred cccCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCccccccccccccCCC
Q 008012 159 NNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 213 (581)
|.+++..|..+..+++|+.|++++|++++.++.. ..+..+..+++.+|++.|.-+
T Consensus 480 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 9999988999999999999999999999877764 678889999999999998755
No 310
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.89 E-value=5.8e-23 Score=219.40 Aligned_cols=203 Identities=24% Similarity=0.313 Sum_probs=162.2
Q ss_pred CCCcEEEeecCcccccCCccc-----cCCCCCCEEEccCCcccccCC-c-------------------------cccCCC
Q 008012 5 QQLQGIGLADNHLQGSIPYDL-----CQLKRLNSLSLQGNKLNGSIP-T-------------------------CLASLT 53 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~l~~n~i~~~~~-~-------------------------~~~~l~ 53 (581)
++|++|+|++|++++.+|..+ +.+++|+.|++++|.+. .| . .+..++
T Consensus 247 ~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~--~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~ 324 (520)
T 2z7x_B 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFG--FPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKIS 324 (520)
T ss_dssp SSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCC--SCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred CcccEEEeecccccCccccchhhcccccCceeEecccccccee--cchhhhhcccccCceeEEEcCCCccccccchhhCC
Confidence 367777777777776777766 66666555555555551 22 1 126788
Q ss_pred CCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCC--CCCccccCCccCcEEeCCCCcCCCCCccc-ccCcccccce
Q 008012 54 SLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTG--SLTSDIQNMKVLIDLDLSRNQLSGDIPKT-IAGLKDLTNL 130 (581)
Q Consensus 54 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~l~~L~~L 130 (581)
+|++|+|++|++++..|..+..+++|++|++++|++++ ..|..+..+++|++|++++|.+++.+|.. +..+++|+.|
T Consensus 325 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L 404 (520)
T 2z7x_B 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSL 404 (520)
T ss_dssp CCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEE
T ss_pred cccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEE
Confidence 99999999999998888899999999999999999985 44567889999999999999998756654 7888999999
Q ss_pred eccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCC-CCCCcCCccccccccccc
Q 008012 131 SLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPT-EGPFRNFSAQSFHWNYAL 209 (581)
Q Consensus 131 ~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~-~~~~~~~~~~~~~~n~~~ 209 (581)
++++|++++..|..+. ++|+.|+|++|+++ .+|..+..+++|+.|++++|+++..++. ...+..+..+++.+|++.
T Consensus 405 ~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 481 (520)
T 2z7x_B 405 NMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 481 (520)
T ss_dssp ECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCc
Confidence 9999999877777664 78999999999998 5787777999999999999999965554 467888999999999998
Q ss_pred cCC
Q 008012 210 CGP 212 (581)
Q Consensus 210 c~~ 212 (581)
|+-
T Consensus 482 c~c 484 (520)
T 2z7x_B 482 CSC 484 (520)
T ss_dssp CCH
T ss_pred ccC
Confidence 863
No 311
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.89 E-value=1.4e-23 Score=226.94 Aligned_cols=190 Identities=21% Similarity=0.250 Sum_probs=175.4
Q ss_pred CCCCCCcEEEeecCcccccC--CccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCC-cccccCCC
Q 008012 2 GRMQQLQGIGLADNHLQGSI--PYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIP-SALWALEY 78 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~ 78 (581)
..+++|++|+|++|++++.. |..+..+++|++|++++|.+++..+. |.++++|++|+|++|.+++..+ ..+.++++
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 422 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 422 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTT
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCC
Confidence 46899999999999999654 78899999999999999999965444 9999999999999999997766 57899999
Q ss_pred CcEEecccCcCCCCCCccccCCccCcEEeCCCCcCC-CCCcccccCcccccceeccccccccccCccccCccccceeecc
Q 008012 79 ILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLS-GDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLS 157 (581)
Q Consensus 79 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~ 157 (581)
|++|++++|.+.+..+..+..+++|++|++++|.++ +.+|..+..+++|+.|+|++|++++..|..|..+++|+.|+++
T Consensus 423 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 502 (570)
T 2z63_A 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMA 502 (570)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCC
Confidence 999999999999888999999999999999999997 5788999999999999999999999889999999999999999
Q ss_pred ccccCCCCchhhhcccccCeeEccCCCCCCCCCCC
Q 008012 158 SNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE 192 (581)
Q Consensus 158 ~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~ 192 (581)
+|++++..|..+..+++|+.|++++|++++..|..
T Consensus 503 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 503 SNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 99999988888999999999999999999988765
No 312
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.89 E-value=6.5e-23 Score=221.04 Aligned_cols=160 Identities=25% Similarity=0.258 Sum_probs=132.7
Q ss_pred cCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCC--CccccCCccCcEEeCCCCcCCCCCcc-cccCccc
Q 008012 50 ASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSL--TSDIQNMKVLIDLDLSRNQLSGDIPK-TIAGLKD 126 (581)
Q Consensus 50 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~ 126 (581)
..+++|++|+|++|++++..|..+.++++|++|++++|++++.. |..+..+++|++|++++|.+++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 67788999999999998878888899999999999999988532 45688889999999999999874554 4788899
Q ss_pred ccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCC-CCCCcCCccccccc
Q 008012 127 LTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPT-EGPFRNFSAQSFHW 205 (581)
Q Consensus 127 L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~-~~~~~~~~~~~~~~ 205 (581)
|+.|+|++|++++..|..+. ++|+.|+|++|+++. +|..+..+++|+.|++++|++++.++. ...+..+..+++.+
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 99999999999876666554 689999999999984 676677999999999999999965555 57788888999999
Q ss_pred cccccCC
Q 008012 206 NYALCGP 212 (581)
Q Consensus 206 n~~~c~~ 212 (581)
|||.|+-
T Consensus 507 N~~~c~c 513 (562)
T 3a79_B 507 NPWDCTC 513 (562)
T ss_dssp CCBCCCH
T ss_pred CCcCCCc
Confidence 9998863
No 313
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.89 E-value=7e-23 Score=226.13 Aligned_cols=159 Identities=27% Similarity=0.290 Sum_probs=79.5
Q ss_pred CCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecc
Q 008012 6 QLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLS 85 (581)
Q Consensus 6 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 85 (581)
+|++|+|++|+|+++.+..|+++++|++|+|++|.|++..|++|.++++|++|+|++|++++..+..|.++++|++|+++
T Consensus 26 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 105 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLM 105 (680)
T ss_dssp TCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECC
Confidence 45555555555554444445555555555555555555545555555555555555555553333345555555555555
Q ss_pred cCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCcccc--CccccceeeccccccCC
Q 008012 86 SNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFG--SLISLESLDLSSNNLSE 163 (581)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~--~l~~L~~L~l~~N~l~~ 163 (581)
+|++++..+..|.++++|++|++++|.+++..|..+.++++|+.|++++|.+++..+..+. .+++|+.|++++|.+++
T Consensus 106 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~ 185 (680)
T 1ziw_A 106 SNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKE 185 (680)
T ss_dssp SSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCC
T ss_pred CCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccc
Confidence 5555544444555555555555555555544444455555555555555555443333322 22444444444444443
Q ss_pred C
Q 008012 164 G 164 (581)
Q Consensus 164 ~ 164 (581)
.
T Consensus 186 ~ 186 (680)
T 1ziw_A 186 F 186 (680)
T ss_dssp B
T ss_pred c
Confidence 3
No 314
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.89 E-value=7.3e-23 Score=230.80 Aligned_cols=90 Identities=20% Similarity=0.180 Sum_probs=47.4
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCcc--ccCCCCCCEEEccCCcccCCCC-cccccCCC
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTC--LASLTSLRELRLNSNKLTSSIP-SALWALEY 78 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~ 78 (581)
+++++|++|+|++|+|++..|+.|+++++|++|+|++|.+++..|.. |.++++|++|+|++|.+++..+ ..|.++++
T Consensus 70 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~ 149 (844)
T 3j0a_A 70 RNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNS 149 (844)
T ss_dssp SSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSS
T ss_pred cCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCC
Confidence 34555555555555555555555555555555555555555433332 5555555555555555554332 34555555
Q ss_pred CcEEecccCcCCC
Q 008012 79 ILYVNLSSNYLTG 91 (581)
Q Consensus 79 L~~L~l~~n~l~~ 91 (581)
|++|+|++|.+++
T Consensus 150 L~~L~Ls~N~i~~ 162 (844)
T 3j0a_A 150 LKSIDFSSNQIFL 162 (844)
T ss_dssp CCEEEEESSCCCC
T ss_pred CCEEECCCCcCCe
Confidence 5555555555543
No 315
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.89 E-value=8.9e-23 Score=190.24 Aligned_cols=175 Identities=25% Similarity=0.261 Sum_probs=156.0
Q ss_pred cEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccC
Q 008012 8 QGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSN 87 (581)
Q Consensus 8 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n 87 (581)
+.+++++++++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGIP--AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCCC--CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 67899999998 5665554 79999999999999887888999999999999999999777778899999999999999
Q ss_pred cCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCch
Q 008012 88 YLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPK 167 (581)
Q Consensus 88 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 167 (581)
++++..+..|..+++|++|++++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 9997777778999999999999999997777778999999999999999998777778999999999999998875
Q ss_pred hhhcccccCeeEccCCCCCCCCCCC
Q 008012 168 SLVALSHLKQFNVSHNRLEGEIPTE 192 (581)
Q Consensus 168 ~~~~l~~L~~l~l~~n~l~~~~~~~ 192 (581)
.+++|+.|+++.|++++.+|..
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~ 184 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNS 184 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCT
T ss_pred ---CCCCHHHHHHHHHhCCceeecc
Confidence 3467899999999999988874
No 316
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=9.5e-23 Score=194.44 Aligned_cols=177 Identities=19% Similarity=0.247 Sum_probs=156.9
Q ss_pred CCCCCCCcEEEeecCc-ccccCCccccCCCCCCEEEccC-CcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCC
Q 008012 1 MGRMQQLQGIGLADNH-LQGSIPYDLCQLKRLNSLSLQG-NKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEY 78 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 78 (581)
|+.+++|++|+|++|+ ++++.+..|.++++|++|+|++ |+|+...+..|.++++|++|+|++|++++ +|. |..+++
T Consensus 51 ~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~ 128 (239)
T 2xwt_C 51 FSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYS 128 (239)
T ss_dssp TTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCB
T ss_pred ccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccc
Confidence 4678999999999997 9877778999999999999999 99998888899999999999999999995 666 889999
Q ss_pred Cc---EEecccC-cCCCCCCccccCCccCc-EEeCCCCcCCCCCcccccCcccccceeccccc-cccccCccccCc-ccc
Q 008012 79 IL---YVNLSSN-YLTGSLTSDIQNMKVLI-DLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQ-FQGPIPESFGSL-ISL 151 (581)
Q Consensus 79 L~---~L~l~~n-~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~-i~~~~~~~~~~l-~~L 151 (581)
|+ +|++++| .+++..+..|..+++|+ +|++++|.++ .+|......++|+.|+|++|+ +++..+..|..+ ++|
T Consensus 129 L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L 207 (239)
T 2xwt_C 129 TDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGP 207 (239)
T ss_dssp CCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCC
T ss_pred cccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCC
Confidence 98 9999999 99977777899999999 9999999999 555544444899999999995 997778889999 999
Q ss_pred ceeeccccccCCCCchhhhcccccCeeEccCC
Q 008012 152 ESLDLSSNNLSEGIPKSLVALSHLKQFNVSHN 183 (581)
Q Consensus 152 ~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n 183 (581)
+.|++++|++++. |.. .+++|+.|+++++
T Consensus 208 ~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 208 SLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp SEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred cEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 9999999999874 433 6788999999876
No 317
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.2e-22 Score=201.31 Aligned_cols=174 Identities=25% Similarity=0.352 Sum_probs=153.9
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcE
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILY 81 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 81 (581)
..+++|++|+|++|++++.. . +..+++|++|+|++|+|++. ..+..+++|++|+|++|++++. +. +..+++|++
T Consensus 60 ~~l~~L~~L~L~~n~i~~~~-~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~ 133 (308)
T 1h6u_A 60 QYLNNLIGLELKDNQITDLA-P-LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQV 133 (308)
T ss_dssp GGCTTCCEEECCSSCCCCCG-G-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCE
T ss_pred hccCCCCEEEccCCcCCCCh-h-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCE
Confidence 46899999999999999544 4 99999999999999999953 4799999999999999999854 43 999999999
Q ss_pred EecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeecccccc
Q 008012 82 VNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNL 161 (581)
Q Consensus 82 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l 161 (581)
|++++|.+++..+ +..+++|++|++++|.+++. +. +.++++|+.|++++|.+++..+ +..+++|+.|+|++|.+
T Consensus 134 L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l 207 (308)
T 1h6u_A 134 LYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQI 207 (308)
T ss_dssp EECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCC
T ss_pred EECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCcc
Confidence 9999999996544 88999999999999999954 44 8999999999999999996544 88999999999999999
Q ss_pred CCCCchhhhcccccCeeEccCCCCCCCC
Q 008012 162 SEGIPKSLVALSHLKQFNVSHNRLEGEI 189 (581)
Q Consensus 162 ~~~~~~~~~~l~~L~~l~l~~n~l~~~~ 189 (581)
++.. .+..+++|+.|++++|++++..
T Consensus 208 ~~~~--~l~~l~~L~~L~l~~N~i~~~~ 233 (308)
T 1h6u_A 208 SDVS--PLANTSNLFIVTLTNQTITNQP 233 (308)
T ss_dssp CBCG--GGTTCTTCCEEEEEEEEEECCC
T ss_pred Cccc--cccCCCCCCEEEccCCeeecCC
Confidence 8744 3889999999999999998643
No 318
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.88 E-value=7.7e-23 Score=207.53 Aligned_cols=178 Identities=25% Similarity=0.220 Sum_probs=154.2
Q ss_pred cEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCcccc-CCCCCCEEEccCCcccCCCCcccccCCCCcEEeccc
Q 008012 8 QGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLA-SLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSS 86 (581)
Q Consensus 8 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 86 (581)
+.+++++|+|+ .+|..+. +.+++|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57899999998 5777665 6789999999999988888888 999999999999999988888899999999999999
Q ss_pred CcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccc---cCccccceeeccccccCC
Q 008012 87 NYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESF---GSLISLESLDLSSNNLSE 163 (581)
Q Consensus 87 n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~---~~l~~L~~L~l~~N~l~~ 163 (581)
|+|+...+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+.
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99997777789999999999999999997778889999999999999999997555555 568999999999999998
Q ss_pred CCchhhhcccc--cCeeEccCCCCCCC
Q 008012 164 GIPKSLVALSH--LKQFNVSHNRLEGE 188 (581)
Q Consensus 164 ~~~~~~~~l~~--L~~l~l~~n~l~~~ 188 (581)
..+..+..++. ++.|+|++|++.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred cCHHHhhhccHhhcceEEecCCCccCC
Confidence 77778888877 48899999988763
No 319
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.88 E-value=5.9e-23 Score=220.87 Aligned_cols=202 Identities=21% Similarity=0.219 Sum_probs=170.9
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
++|++|+|++|+|++..|..|+++++|++|+|++|+|++..|++|.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 57999999999999888889999999999999999999888899999999999999999999877778999999999999
Q ss_pred ccCcCCCC-CCccccCCccCcEEeCCCCcCCCCCc-ccccCcccccceeccccccccccCccccCccccceeeccccccC
Q 008012 85 SSNYLTGS-LTSDIQNMKVLIDLDLSRNQLSGDIP-KTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLS 162 (581)
Q Consensus 85 ~~n~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~ 162 (581)
++|.+++. .+..+.++++|++|++++|.+.+.+| ..|.++++|+.|++++|.+++..|..+..+++|+.|+++.|.+.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~ 185 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA 185 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST
T ss_pred CCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc
Confidence 99999863 46788999999999999998444554 67999999999999999999889999999999999999999987
Q ss_pred CCCchh-hhcccccCeeEccCCCCCCCC----CCCCCCcCCccccccccc
Q 008012 163 EGIPKS-LVALSHLKQFNVSHNRLEGEI----PTEGPFRNFSAQSFHWNY 207 (581)
Q Consensus 163 ~~~~~~-~~~l~~L~~l~l~~n~l~~~~----~~~~~~~~~~~~~~~~n~ 207 (581)
. .|.. +..+++|+.|++++|++++.. +.......+..+.+.+|.
T Consensus 186 ~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 234 (549)
T 2z81_A 186 F-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSV 234 (549)
T ss_dssp T-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCE
T ss_pred c-cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccc
Confidence 5 4444 456899999999999998742 222334555666665554
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.88 E-value=8.1e-24 Score=223.10 Aligned_cols=207 Identities=19% Similarity=0.200 Sum_probs=164.2
Q ss_pred CCCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCc----------------cccCCCCCCEEEccCCc
Q 008012 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPT----------------CLASLTSLRELRLNSNK 64 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~----------------~~~~l~~L~~L~L~~N~ 64 (581)
|+.+++|++|+|++|.|++..| |..+++|++|+|++|.|++..+. ....+++|++|+|++|+
T Consensus 54 ~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~ 131 (487)
T 3oja_A 54 LAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNK 131 (487)
T ss_dssp GTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSC
T ss_pred HhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCC
Confidence 4567888888888888886555 88888888888888877743211 12346789999999999
Q ss_pred ccCCCCcccccCCCCcEEecccCcCCCCCCcccc-CCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCc
Q 008012 65 LTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQ-NMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPE 143 (581)
Q Consensus 65 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~ 143 (581)
|++..|..+..+++|++|+|++|.+++..|..+. .+++|++|+|++|.|++. |. +..+++|+.|+|++|.|++.+|
T Consensus 132 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~- 208 (487)
T 3oja_A 132 ITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP- 208 (487)
T ss_dssp CCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-
T ss_pred CCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCH-
Confidence 9988888999999999999999999988888886 799999999999999954 33 4569999999999999997544
Q ss_pred cccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCC-CCCC-CCCCcCCcccccc-------ccccccCCC
Q 008012 144 SFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEG-EIPT-EGPFRNFSAQSFH-------WNYALCGPQ 213 (581)
Q Consensus 144 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~-~~~~-~~~~~~~~~~~~~-------~n~~~c~~~ 213 (581)
.|..+++|+.|+|++|.+++ +|..+..+++|+.|++++|++.+ .+|. ...+..+..+... .+++.|..+
T Consensus 209 ~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~~~~~~~~~~~c~~~ 286 (487)
T 3oja_A 209 EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVP 286 (487)
T ss_dssp GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHHHHHHTSSSSCCCSST
T ss_pred hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccccccccCCCcccccCC
Confidence 58899999999999999986 77789999999999999999983 3322 2344444444443 455555443
No 321
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.88 E-value=2.7e-22 Score=202.58 Aligned_cols=191 Identities=25% Similarity=0.338 Sum_probs=97.3
Q ss_pred CCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEe
Q 008012 4 MQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVN 83 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 83 (581)
+++|++|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|+
T Consensus 154 l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~ 227 (347)
T 4fmz_A 154 MTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLK 227 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEE
T ss_pred CCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEE
Confidence 3344444444444442211 4444444444444444442211 4444444444444444442222 55555555555
Q ss_pred cccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCC
Q 008012 84 LSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 84 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 163 (581)
+++|.+++..+ +..+++|++|++++|.+++. +.+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++
T Consensus 228 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 228 IGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCG
T ss_pred ccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCC
Confidence 55555553322 55556666666666655532 3455556666666666666543 235555666666666666655
Q ss_pred CCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccc
Q 008012 164 GIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNY 207 (581)
Q Consensus 164 ~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~ 207 (581)
..+..+..+++|+.|++++|++++..| ...+..+..+++.+|+
T Consensus 302 ~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 302 EDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQV 344 (347)
T ss_dssp GGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC-
T ss_pred cChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhc
Confidence 555556666666666666666665444 4445555555555554
No 322
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2.3e-22 Score=187.44 Aligned_cols=164 Identities=24% Similarity=0.196 Sum_probs=149.2
Q ss_pred CCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEe
Q 008012 4 MQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVN 83 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 83 (581)
.++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 46799999999999987777899999999999999999988778899999999999999999977777889999999999
Q ss_pred cccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCC
Q 008012 84 LSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 84 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 163 (581)
+++|+|++..+..|..+++|++|++++|.+++..+..+..+++|+.|+|++|++.+ .+++|++|+++.|.+++
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g 179 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSG 179 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTT
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCc
Confidence 99999998777789999999999999999997766678999999999999998774 46789999999999999
Q ss_pred CCchhhhcccc
Q 008012 164 GIPKSLVALSH 174 (581)
Q Consensus 164 ~~~~~~~~l~~ 174 (581)
.+|..++.++.
T Consensus 180 ~ip~~~~~l~~ 190 (208)
T 2o6s_A 180 VVRNSAGSVAP 190 (208)
T ss_dssp TBBCTTSSBCT
T ss_pred eeeccCccccC
Confidence 99988876654
No 323
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.88 E-value=1.6e-22 Score=216.07 Aligned_cols=65 Identities=17% Similarity=0.241 Sum_probs=45.2
Q ss_pred cCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCC--CCCC-CCCCcCCcccccccccccc
Q 008012 146 GSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEG--EIPT-EGPFRNFSAQSFHWNYALC 210 (581)
Q Consensus 146 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~--~~~~-~~~~~~~~~~~~~~n~~~c 210 (581)
..+++|++|++++|.+++..|..+..+++|+.|++++|++++ .+|. ...+..+..+++.+|...-
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 388 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBC
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCc
Confidence 456777788888888877777777778888888888887775 2222 3456667777777766543
No 324
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=1.6e-22 Score=200.90 Aligned_cols=180 Identities=18% Similarity=0.166 Sum_probs=154.9
Q ss_pred CCCCCCcEEEeecCcccccCC----ccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCC----CCccc
Q 008012 2 GRMQQLQGIGLADNHLQGSIP----YDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSS----IPSAL 73 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~ 73 (581)
+.+++|++|+|++|++++..+ ..+..+++|++|+|++|+|++..+..|.++++|++|+|++|++.+. .+..+
T Consensus 114 ~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 193 (310)
T 4glp_A 114 ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCP 193 (310)
T ss_dssp CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCT
T ss_pred ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhh
Confidence 678999999999999997555 4456799999999999999988889999999999999999998642 13345
Q ss_pred ccCCCCcEEecccCcCCCCCCc----cccCCccCcEEeCCCCcCCCCCcccccCc---ccccceeccccccccccCcccc
Q 008012 74 WALEYILYVNLSSNYLTGSLTS----DIQNMKVLIDLDLSRNQLSGDIPKTIAGL---KDLTNLSLAGNQFQGPIPESFG 146 (581)
Q Consensus 74 ~~l~~L~~L~l~~n~l~~~~~~----~~~~l~~L~~L~l~~N~l~~~~~~~~~~l---~~L~~L~l~~N~i~~~~~~~~~ 146 (581)
..+++|++|+|++|+++ .++. .+..+++|++|+|++|++++..|..+..+ ++|+.|+|++|+|+ .+|..+.
T Consensus 194 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~ 271 (310)
T 4glp_A 194 HKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP 271 (310)
T ss_dssp TSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC
T ss_pred hcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc
Confidence 78999999999999998 3333 35788999999999999998878888777 69999999999999 5677664
Q ss_pred CccccceeeccccccCCCCchhhhcccccCeeEccCCCCCC
Q 008012 147 SLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEG 187 (581)
Q Consensus 147 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 187 (581)
++|+.|+|++|++++. |. +..+++|+.|++++|+++.
T Consensus 272 --~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 272 --AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp --SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred --CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 7999999999999974 44 6788999999999999974
No 325
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.87 E-value=7e-22 Score=207.83 Aligned_cols=198 Identities=26% Similarity=0.384 Sum_probs=110.8
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCC--------------------ccccCCCCCCEEEcc
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIP--------------------TCLASLTSLRELRLN 61 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~--------------------~~~~~l~~L~~L~L~ 61 (581)
+++++|++|++++|.+++. ..+..+++|++|++++|.+++..+ +.+..+++|++|+|+
T Consensus 174 ~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~ 251 (466)
T 1o6v_A 174 ANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLA 251 (466)
T ss_dssp TTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECC
T ss_pred ccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccchhhhcCCCCCEEECC
Confidence 3455555555555555532 234555555555555555553322 234445555555555
Q ss_pred CCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceecccccccccc
Q 008012 62 SNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPI 141 (581)
Q Consensus 62 ~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~ 141 (581)
+|.+++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|+|++|++++..
T Consensus 252 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~ 325 (466)
T 1o6v_A 252 NNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDIS 325 (466)
T ss_dssp SSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCG
T ss_pred CCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCch
Confidence 555543322 5555555555555555553322 5555666666666666654322 555666666666666666544
Q ss_pred CccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCC
Q 008012 142 PESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGP 212 (581)
Q Consensus 142 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 212 (581)
| +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++..| ...+..+..+.+.+|++...+
T Consensus 326 ~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~~~~p 391 (466)
T 1o6v_A 326 P--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTNAP 391 (466)
T ss_dssp G--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEEECCC
T ss_pred h--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcccCCc
Confidence 3 55666666666666666553 356666677777777777766555 555666666777777666543
No 326
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.87 E-value=4.2e-22 Score=187.13 Aligned_cols=153 Identities=22% Similarity=0.274 Sum_probs=127.4
Q ss_pred cEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccC
Q 008012 8 QGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSN 87 (581)
Q Consensus 8 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n 87 (581)
+.+++++++++ .+|..+. ++|+.|+|++|+|+++.+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 56888888888 5676665 78888888888888777778888888888888888888777888888888888888888
Q ss_pred cCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCC
Q 008012 88 YLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 88 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 163 (581)
+|+...+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 8886666677888888888888888887777888888888888888888887777778888888888888888865
No 327
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.87 E-value=6.9e-22 Score=213.00 Aligned_cols=108 Identities=19% Similarity=0.219 Sum_probs=84.5
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
++|++|+|++|+|++..|..|+++++|++|+|++|+|++..|++|.++++|++|+|++|+|+ .+|.. .+++|++|++
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 56888888888888777778888888888888888888777888888888888888888887 45554 7788888888
Q ss_pred ccCcCCCC-CCccccCCccCcEEeCCCCcCCC
Q 008012 85 SSNYLTGS-LTSDIQNMKVLIDLDLSRNQLSG 115 (581)
Q Consensus 85 ~~n~l~~~-~~~~~~~l~~L~~L~l~~N~l~~ 115 (581)
++|++++. .|..|.++++|++|++++|.+++
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 88888753 34677788888888888887764
No 328
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.87 E-value=6.8e-22 Score=185.69 Aligned_cols=153 Identities=24% Similarity=0.284 Sum_probs=103.6
Q ss_pred cEEEeecCcccccCCccccCCCCCCEEEccCCcccccCC-ccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEeccc
Q 008012 8 QGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIP-TCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSS 86 (581)
Q Consensus 8 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 86 (581)
+.+++++|+++ .+|..+. +.+++|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 46777777776 4555544 455677777777775533 4466777777777777777766666677777777777777
Q ss_pred CcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCC
Q 008012 87 NYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 87 n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 163 (581)
|.|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.+++
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 77776666666777777777777777776666666677777777777777766666666666777777777776665
No 329
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.87 E-value=7.8e-22 Score=193.67 Aligned_cols=171 Identities=25% Similarity=0.375 Sum_probs=143.6
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
.+++|++|++++|.++.. + .+..+++|++|+|++|+|++..+ +.++++|++|+|++|++++ ++ .+..+++|++|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEE
Confidence 467889999999999844 4 48889999999999999996544 8899999999999999984 33 48889999999
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccC
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLS 162 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~ 162 (581)
++++|++++. ..+..+++|++|++++|.+++. ..+..+++|+.|++++|+|++..+ +..+++|+.|++++|.++
T Consensus 118 ~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 118 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp ECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 9999999853 4688899999999999999854 578889999999999999987654 888999999999999998
Q ss_pred CCCchhhhcccccCeeEccCCCCCC
Q 008012 163 EGIPKSLVALSHLKQFNVSHNRLEG 187 (581)
Q Consensus 163 ~~~~~~~~~l~~L~~l~l~~n~l~~ 187 (581)
+ ++ .+..+++|+.|++++|+++.
T Consensus 192 ~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 192 D-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp B-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred C-Ch-hhccCCCCCEEECcCCcccC
Confidence 6 44 48889999999999998875
No 330
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.87 E-value=3.2e-22 Score=187.91 Aligned_cols=157 Identities=25% Similarity=0.285 Sum_probs=142.9
Q ss_pred CCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCC-cccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCC
Q 008012 31 LNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIP-SALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLS 109 (581)
Q Consensus 31 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 109 (581)
-+.+++++|.++. +|..+. ..+++|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 13 ~~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 3589999999994 676554 467999999999997744 568999999999999999998888899999999999999
Q ss_pred CCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCC
Q 008012 110 RNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEI 189 (581)
Q Consensus 110 ~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~ 189 (581)
+|.+++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.+++..|..|..+++|+.|++++|++++..
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99999888888999999999999999999988999999999999999999999988999999999999999999999765
Q ss_pred C
Q 008012 190 P 190 (581)
Q Consensus 190 ~ 190 (581)
+
T Consensus 170 ~ 170 (220)
T 2v70_A 170 Y 170 (220)
T ss_dssp G
T ss_pred c
Confidence 4
No 331
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.86 E-value=6.6e-22 Score=212.69 Aligned_cols=198 Identities=21% Similarity=0.254 Sum_probs=168.2
Q ss_pred CCCcEEEeecCcccccCCccc-cCCCCCCEEEccCCcccccCC---ccccCCCCCCEEEccCCcccCCCC--cccccCCC
Q 008012 5 QQLQGIGLADNHLQGSIPYDL-CQLKRLNSLSLQGNKLNGSIP---TCLASLTSLRELRLNSNKLTSSIP--SALWALEY 78 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~i~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~ 78 (581)
++|++|++++|+++ .+|..+ .++++|++|+|++|+|++..| ..+..+++|++|+|++|++++..+ ..+..+++
T Consensus 310 ~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~ 388 (549)
T 2z81_A 310 EKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKN 388 (549)
T ss_dssp TTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTT
T ss_pred ccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCC
Confidence 57899999999998 667665 679999999999999997653 347889999999999999985432 56889999
Q ss_pred CcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccc
Q 008012 79 ILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSS 158 (581)
Q Consensus 79 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~ 158 (581)
|++|++++|+++ .+|..+..+++|++|++++|+++ .+|..+ .++|+.|+|++|+|++.+ ..+++|++|+|++
T Consensus 389 L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~ 460 (549)
T 2z81_A 389 LTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISR 460 (549)
T ss_dssp CCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCS
T ss_pred CCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCC
Confidence 999999999999 67888899999999999999998 455443 368999999999998643 5789999999999
Q ss_pred cccCCCCchhhhcccccCeeEccCCCCCCCCCC-CCCCcCCccccccccccccCCC
Q 008012 159 NNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPT-EGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
|+++. +|. ...+++|+.|++++|++++.+|. ...+..++.+++.+|++.|+-+
T Consensus 461 N~l~~-ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 461 NKLKT-LPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp SCCSS-CCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CccCc-CCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 99985 665 56799999999999999988876 3778889999999999988743
No 332
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.86 E-value=4.1e-22 Score=187.17 Aligned_cols=155 Identities=23% Similarity=0.316 Sum_probs=142.5
Q ss_pred CEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCC
Q 008012 32 NSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRN 111 (581)
Q Consensus 32 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 111 (581)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 68999999999 5666554 68999999999999888889999999999999999999888999999999999999999
Q ss_pred cCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCC
Q 008012 112 QLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEI 189 (581)
Q Consensus 112 ~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~ 189 (581)
.|+...+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|++.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 999666666899999999999999999988999999999999999999999988888999999999999999998743
No 333
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.86 E-value=8.8e-22 Score=215.42 Aligned_cols=181 Identities=24% Similarity=0.228 Sum_probs=128.7
Q ss_pred EEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCc
Q 008012 9 GIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNY 88 (581)
Q Consensus 9 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~ 88 (581)
..+.++.+++ .+|..+. +++++|||++|+|+.+.+.+|.++++|++|+|++|+|++..|++|.++++|++|+|++|+
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 4566666776 5665554 577777777777776666777777777777777777776666677777777777777777
Q ss_pred CCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccc-cCccccCccccceeeccccccCCCCch
Q 008012 89 LTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGP-IPESFGSLISLESLDLSSNNLSEGIPK 167 (581)
Q Consensus 89 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~ 167 (581)
|++..+.+|.++++|++|+|++|++++..+..|+++++|+.|+|++|.|++. .|..++.+++|++|+|++|++++..+.
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 191 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccc
Confidence 7766666777777777777777777765555677777777777777777653 456677777777777777777776676
Q ss_pred hhhcccccC----eeEccCCCCCCCCCCC
Q 008012 168 SLVALSHLK----QFNVSHNRLEGEIPTE 192 (581)
Q Consensus 168 ~~~~l~~L~----~l~l~~n~l~~~~~~~ 192 (581)
.+..+.+++ .++++.|.++...+..
T Consensus 192 ~l~~L~~l~~~~~~~~ls~n~l~~i~~~~ 220 (635)
T 4g8a_A 192 DLRVLHQMPLLNLSLDLSLNPMNFIQPGA 220 (635)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTT
T ss_pred cccchhhhhhhhhhhhcccCcccccCccc
Confidence 666665543 5667777776555443
No 334
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.86 E-value=4e-22 Score=198.56 Aligned_cols=200 Identities=19% Similarity=0.190 Sum_probs=158.7
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCC----------------ccccCCCCCCEEEccCCcc
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIP----------------TCLASLTSLRELRLNSNKL 65 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~----------------~~~~~l~~L~~L~L~~N~l 65 (581)
+.+++|++|+|++|++++..+ |..+++|++|+|++|+|++..+ .....+++|++|+|++|++
T Consensus 55 ~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l 132 (317)
T 3o53_A 55 APFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKI 132 (317)
T ss_dssp TTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCC
T ss_pred hCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCC
Confidence 567888888888888886544 7888888888888888774321 0123457789999999999
Q ss_pred cCCCCcccccCCCCcEEecccCcCCCCCCccc-cCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCcc
Q 008012 66 TSSIPSALWALEYILYVNLSSNYLTGSLTSDI-QNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPES 144 (581)
Q Consensus 66 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~ 144 (581)
++..+..+..+++|++|++++|.+++..+..+ ..+++|++|++++|.+++. +. ...+++|+.|+|++|+|++. |..
T Consensus 133 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l-~~~ 209 (317)
T 3o53_A 133 TMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFM-GPE 209 (317)
T ss_dssp CSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEE-CGG
T ss_pred CCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcc-hhh
Confidence 98778889999999999999999997777776 4789999999999999854 43 44599999999999999964 555
Q ss_pred ccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCC-CCCCCC-CCCcCCccccccccc
Q 008012 145 FGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLE-GEIPTE-GPFRNFSAQSFHWNY 207 (581)
Q Consensus 145 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~-~~~~~~-~~~~~~~~~~~~~n~ 207 (581)
+..+++|+.|+|++|.++. +|..+..+++|+.|++++|+++ +.++.. ..+..+..+.+.++.
T Consensus 210 ~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~ 273 (317)
T 3o53_A 210 FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVK 273 (317)
T ss_dssp GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCch
Confidence 8899999999999999985 6778999999999999999998 333322 344555566665443
No 335
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.86 E-value=3.7e-21 Score=181.92 Aligned_cols=154 Identities=25% Similarity=0.289 Sum_probs=120.7
Q ss_pred CcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEeccc
Q 008012 7 LQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSS 86 (581)
Q Consensus 7 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 86 (581)
.+.+++++++++ .+|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 356788888887 5666555 7888888888888877788888888888888888888766666778888888888888
Q ss_pred CcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCC
Q 008012 87 NYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEG 164 (581)
Q Consensus 87 n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~ 164 (581)
|+|++..+..|..+++|++|+|++|+|+ .+|..+.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+++.
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 8888666667778888888888888887 6777778888888888888888866666777788888888888887753
No 336
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.85 E-value=6.6e-21 Score=200.38 Aligned_cols=194 Identities=27% Similarity=0.405 Sum_probs=149.0
Q ss_pred CCCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCc
Q 008012 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYIL 80 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 80 (581)
++.+++|++|+++ |.+.+.. .+.++++|++|++++|.+++. ..+..+++|++|++++|++++..| +..+++|+
T Consensus 152 ~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 224 (466)
T 1o6v_A 152 LSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLD 224 (466)
T ss_dssp GTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCC
T ss_pred hccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCC
Confidence 4678999999997 5565443 399999999999999999954 458999999999999999986655 77788899
Q ss_pred EEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccc
Q 008012 81 YVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNN 160 (581)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~ 160 (581)
+|++++|.+++. ..+..+++|++|++++|.+++..+ +.++++|+.|++++|.+++..+ +..+++|+.|++++|.
T Consensus 225 ~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~ 298 (466)
T 1o6v_A 225 ELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQ 298 (466)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSC
T ss_pred EEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCc
Confidence 999998888853 357788888888888888875443 7778888888888888876543 7777888888888888
Q ss_pred cCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCcccccccccccc
Q 008012 161 LSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALC 210 (581)
Q Consensus 161 l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c 210 (581)
+++..+ +..+++|+.|++++|++++..| ...+..+..+.+.+|....
T Consensus 299 l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 299 LEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp CSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCC
T ss_pred ccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCC
Confidence 776433 6677777777777777776555 4456666666666665443
No 337
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.85 E-value=3.3e-21 Score=210.83 Aligned_cols=208 Identities=21% Similarity=0.255 Sum_probs=178.8
Q ss_pred CCCCCcEEEeecCcccc--cCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCC-CcccccCCCC
Q 008012 3 RMQQLQGIGLADNHLQG--SIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSI-PSALWALEYI 79 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L 79 (581)
.+++|+.|++++|.+.. ..+..+..+.+|++|+++.|.+. ..+..+..+++|+.+++..|++.... +..|..+++|
T Consensus 369 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l 447 (635)
T 4g8a_A 369 DLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 447 (635)
T ss_dssp BCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTC
T ss_pred cccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhcccccccccccccccccc
Confidence 46777888888887752 34556667788888888888877 35667888999999999988776544 4568899999
Q ss_pred cEEecccCcCCCCCCccccCCccCcEEeCCCCcC-CCCCcccccCcccccceeccccccccccCccccCccccceeeccc
Q 008012 80 LYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQL-SGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSS 158 (581)
Q Consensus 80 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l-~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~ 158 (581)
+.+++++|.+.+..+..+..++.|+.|++++|.+ .+..|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 448 ~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~ 527 (635)
T 4g8a_A 448 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 527 (635)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCC
Confidence 9999999999988888999999999999999985 445788899999999999999999999999999999999999999
Q ss_pred cccCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCC-cCCccccccccccccC
Q 008012 159 NNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPF-RNFSAQSFHWNYALCG 211 (581)
Q Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~-~~~~~~~~~~n~~~c~ 211 (581)
|+|++..|..|..+++|+.|+|++|++++.+|.. ..+ ..+..+++.+|||.|+
T Consensus 528 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 528 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp SCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 9999988999999999999999999999888875 344 5789999999999997
No 338
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.85 E-value=9.8e-21 Score=191.16 Aligned_cols=170 Identities=24% Similarity=0.407 Sum_probs=77.8
Q ss_pred CCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEe
Q 008012 4 MQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVN 83 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 83 (581)
+++|++|++++|.++. ++ .+..+++|++|++++|.|++. +. |..+++|++|+|++|.+++ + ..+..+++|++|+
T Consensus 43 l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEE
T ss_pred cccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEE
Confidence 3445555555555542 22 245555555555555555532 22 5555555555555555542 2 2355555555555
Q ss_pred cccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCC
Q 008012 84 LSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 84 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 163 (581)
+++|.+++..+ +..+++|++|++++|...... ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 55555553221 444555555555555333222 224444444444444444443222 4444444444444444443
Q ss_pred CCchhhhcccccCeeEccCCCCC
Q 008012 164 GIPKSLVALSHLKQFNVSHNRLE 186 (581)
Q Consensus 164 ~~~~~~~~l~~L~~l~l~~n~l~ 186 (581)
..+ +..+++|+.|++++|.++
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~ 212 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQIT 212 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCC
T ss_pred ccc--ccCCCccceeecccCCCC
Confidence 211 334444444444444444
No 339
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.85 E-value=1.7e-21 Score=197.66 Aligned_cols=179 Identities=24% Similarity=0.172 Sum_probs=153.1
Q ss_pred CCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccc-cCCCCcEEecccCcCCCCCCccccCCccCcEEeCC
Q 008012 31 LNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALW-ALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLS 109 (581)
Q Consensus 31 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 109 (581)
-+.+++++|.|+ .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 20 ~~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 20 SNILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TTEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 368999999999 5676554 4699999999999988888887 99999999999999998888899999999999999
Q ss_pred CCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhh---hcccccCeeEccCCCCC
Q 008012 110 RNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSL---VALSHLKQFNVSHNRLE 186 (581)
Q Consensus 110 ~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~---~~l~~L~~l~l~~n~l~ 186 (581)
+|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.|+...+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999997777789999999999999999998889999999999999999999998555555 57999999999999999
Q ss_pred CCCCCC-CCCcC--CccccccccccccCC
Q 008012 187 GEIPTE-GPFRN--FSAQSFHWNYALCGP 212 (581)
Q Consensus 187 ~~~~~~-~~~~~--~~~~~~~~n~~~c~~ 212 (581)
+..+.. ..+.. +..+.+.+|||.|+-
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 654332 22332 356889999999973
No 340
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.85 E-value=1.2e-20 Score=178.43 Aligned_cols=157 Identities=23% Similarity=0.240 Sum_probs=142.8
Q ss_pred CCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCC
Q 008012 30 RLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLS 109 (581)
Q Consensus 30 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 109 (581)
.-+.++++++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|..+++|++|+|+
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 4578999999999 5665554 899999999999998889999999999999999999997777788999999999999
Q ss_pred CCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCC
Q 008012 110 RNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEI 189 (581)
Q Consensus 110 ~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~ 189 (581)
+|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++++..
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 99999777777899999999999999999 67888999999999999999999877788999999999999999999866
Q ss_pred C
Q 008012 190 P 190 (581)
Q Consensus 190 ~ 190 (581)
+
T Consensus 176 ~ 176 (229)
T 3e6j_A 176 R 176 (229)
T ss_dssp G
T ss_pred c
Confidence 5
No 341
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.85 E-value=2.7e-20 Score=194.44 Aligned_cols=187 Identities=22% Similarity=0.238 Sum_probs=110.5
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
++++|++|+|++|++++. | .++.+++|++|+|++|.|++. | ++.+++|++|+|++|+|++. + +..+++|++|
T Consensus 40 ~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L 111 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYL 111 (457)
T ss_dssp HHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEE
T ss_pred HcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEE
Confidence 356677777777777643 4 466677777777777777643 3 66666677777777766643 2 6666666666
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCc--------------------ccccCcccccceeccccccccccC
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIP--------------------KTIAGLKDLTNLSLAGNQFQGPIP 142 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~--------------------~~~~~l~~L~~L~l~~N~i~~~~~ 142 (581)
++++|++++. + +..+++|++|++++|++++. + -.+..+++|+.|++++|++++. |
T Consensus 112 ~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~l-~ 186 (457)
T 3bz5_A 112 NCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-DVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITEL-D 186 (457)
T ss_dssp ECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-CCTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCCC-C
T ss_pred ECCCCcCCee-c--CCCCCcCCEEECCCCcccee-ccccCCcCCEEECCCCCcccccccccCCcCCEEECCCCcccee-c
Confidence 6666666642 2 56666666666666666542 2 0234445555555555555542 2
Q ss_pred ccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccc
Q 008012 143 ESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYAL 209 (581)
Q Consensus 143 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~ 209 (581)
+..+++|+.|++++|.+++. .+..+++|+.|++++|++++ +| ...+..+..+++.+|...
T Consensus 187 --l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l~ 246 (457)
T 3bz5_A 187 --VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVNPLT 246 (457)
T ss_dssp --CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC-CTTCTTCSEEECCSSCCS
T ss_pred --cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC-ccccCCCCEEEeeCCcCC
Confidence 45555566666666655543 25556666666666666665 33 445556666666666443
No 342
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.84 E-value=7.1e-21 Score=204.61 Aligned_cols=173 Identities=24% Similarity=0.360 Sum_probs=151.6
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
.+++|+.|+|++|.|+. ++ .+..|++|+.|+|++|+|++..+ |..+++|+.|+|++|+|++ +| .+..+++|+.|
T Consensus 41 ~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L 114 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSL 114 (605)
T ss_dssp HHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEE
T ss_pred cCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEE
Confidence 46789999999999984 44 58999999999999999996544 8999999999999999984 34 68999999999
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccC
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLS 162 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~ 162 (581)
+|++|.|++. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|.|+
T Consensus 115 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 115 SLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp ECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 9999999953 4688999999999999999954 678999999999999999997666 889999999999999998
Q ss_pred CCCchhhhcccccCeeEccCCCCCCCC
Q 008012 163 EGIPKSLVALSHLKQFNVSHNRLEGEI 189 (581)
Q Consensus 163 ~~~~~~~~~l~~L~~l~l~~n~l~~~~ 189 (581)
+. + .+..+++|+.|+|++|+++..+
T Consensus 189 ~l-~-~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 189 DL-R-ALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp BC-G-GGTTCTTCSEEECCSEEEECCC
T ss_pred CC-h-HHccCCCCCEEEccCCcCcCCc
Confidence 74 4 6889999999999999998653
No 343
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.84 E-value=5.9e-21 Score=176.17 Aligned_cols=154 Identities=16% Similarity=0.249 Sum_probs=116.8
Q ss_pred ccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCc
Q 008012 25 LCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLI 104 (581)
Q Consensus 25 ~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 104 (581)
...+++|++|++++|.|+ .+| .+..+++|++|+|++|.++ .+..+..+++|++|++++|++++..+..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356678888888888888 444 5778888888888888765 334677788888888888888866777788888888
Q ss_pred EEeCCCCcCCCCCcccccCcccccceeccccc-cccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCC
Q 008012 105 DLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQ-FQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHN 183 (581)
Q Consensus 105 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~-i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n 183 (581)
+|++++|.+++..|..+..+++|+.|++++|. ++. ++ .+..+++|+.|++++|.+++ ++ .+..+++|+.|++++|
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N 191 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQ 191 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCc
Confidence 88888888886677778888888888888887 663 34 57778888888888888876 33 6778888888888888
Q ss_pred CCC
Q 008012 184 RLE 186 (581)
Q Consensus 184 ~l~ 186 (581)
++.
T Consensus 192 ~i~ 194 (197)
T 4ezg_A 192 TIG 194 (197)
T ss_dssp ---
T ss_pred ccC
Confidence 875
No 344
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=3.9e-21 Score=188.66 Aligned_cols=192 Identities=22% Similarity=0.347 Sum_probs=163.3
Q ss_pred CcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEeccc
Q 008012 7 LQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSS 86 (581)
Q Consensus 7 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 86 (581)
+..+.+..+.+++.. .+..+++|++|++++|.|+.. + .+..+++|++|+|++|++++..+ +..+++|++|++++
T Consensus 26 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 344566677776443 356789999999999999954 3 48999999999999999996544 99999999999999
Q ss_pred CcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCc
Q 008012 87 NYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIP 166 (581)
Q Consensus 87 n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 166 (581)
|.+++ ++ .+..+++|++|++++|++++. +.+..+++|+.|++++|++++. ..+..+++|+.|++++|.+++..+
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh
Confidence 99995 33 499999999999999999953 5689999999999999999965 678999999999999999987554
Q ss_pred hhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCCC
Q 008012 167 KSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 167 ~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
+..+++|+.|++++|+++. ++....+..+..+++.+|+..+.+.
T Consensus 174 --l~~l~~L~~L~L~~N~i~~-l~~l~~l~~L~~L~l~~n~i~~~~~ 217 (291)
T 1h6t_A 174 --LAGLTKLQNLYLSKNHISD-LRALAGLKNLDVLELFSQECLNKPI 217 (291)
T ss_dssp --GTTCTTCCEEECCSSCCCB-CGGGTTCTTCSEEEEEEEEEECCCE
T ss_pred --hcCCCccCEEECCCCcCCC-ChhhccCCCCCEEECcCCcccCCcc
Confidence 8999999999999999995 4557788899999999998766543
No 345
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.83 E-value=7.4e-20 Score=191.08 Aligned_cols=171 Identities=25% Similarity=0.241 Sum_probs=149.5
Q ss_pred CCCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCc
Q 008012 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYIL 80 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 80 (581)
++.+++|++|+|++|+|++. + ++++++|++|+|++|+|++. + +.++++|++|+|++|++++. + +..+++|+
T Consensus 81 ~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~ 151 (457)
T 3bz5_A 81 LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLT 151 (457)
T ss_dssp CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCC
T ss_pred cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCC
Confidence 46789999999999999964 4 89999999999999999964 4 89999999999999999964 3 88999999
Q ss_pred EEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccc
Q 008012 81 YVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNN 160 (581)
Q Consensus 81 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~ 160 (581)
+|++++|...+.+ .+..+++|++|++++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|+
T Consensus 152 ~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~ 223 (457)
T 3bz5_A 152 ELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNK 223 (457)
T ss_dssp EEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSC
T ss_pred EEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCc
Confidence 9999999655444 58889999999999999995 55 88899999999999999975 48889999999999999
Q ss_pred cCCCCchhhhcccccCeeEccCCCCCCCCCC
Q 008012 161 LSEGIPKSLVALSHLKQFNVSHNRLEGEIPT 191 (581)
Q Consensus 161 l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~ 191 (581)
+++ +| +..+++|+.|++++|++++.++.
T Consensus 224 l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~ 251 (457)
T 3bz5_A 224 LTE-ID--VTPLTQLTYFDCSVNPLTELDVS 251 (457)
T ss_dssp CSC-CC--CTTCTTCSEEECCSSCCSCCCCT
T ss_pred ccc-cC--ccccCCCCEEEeeCCcCCCcCHH
Confidence 988 55 88899999999999999976543
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=2.6e-20 Score=188.03 Aligned_cols=197 Identities=17% Similarity=0.139 Sum_probs=156.3
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccc-cCCccccCCCCCCE-EEccCCcccCCCCcccccCCCCcEE
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNG-SIPTCLASLTSLRE-LRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
++|++|+|++|+|+++.++.|.++++|++|+|++|+|.+ +.+++|.++++|.+ +.+++|+|+...|..|..+++|++|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 578999999999997666789999999999999999864 44568899999876 5677899998888899999999999
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCC-CcCCCCCcccccCcc-cccceeccccccccccCccccCccccceeeccc-c
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSR-NQLSGDIPKTIAGLK-DLTNLSLAGNQFQGPIPESFGSLISLESLDLSS-N 159 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~l~-~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~-N 159 (581)
++++|+|+...+..+....++..|++++ |.+....+..|..+. .++.|+|++|+|+.+.+..| ...+|+.|++++ |
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n 188 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNN 188 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCC
Confidence 9999999977777777788888999865 567755555677665 68899999999996544444 567899999974 7
Q ss_pred ccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCcccccc
Q 008012 160 NLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFH 204 (581)
Q Consensus 160 ~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~ 204 (581)
.++.+.+..|..+++|+.|++++|+|+..++.. +..+..+...
T Consensus 189 ~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~--~~~L~~L~~l 231 (350)
T 4ay9_X 189 NLEELPNDVFHGASGPVILDISRTRIHSLPSYG--LENLKKLRAR 231 (350)
T ss_dssp TCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS--CTTCCEEECT
T ss_pred cccCCCHHHhccCcccchhhcCCCCcCccChhh--hccchHhhhc
Confidence 787666677899999999999999999655432 4444444433
No 347
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.83 E-value=2.7e-22 Score=205.74 Aligned_cols=207 Identities=17% Similarity=0.216 Sum_probs=123.6
Q ss_pred CCCCCcEEEeecCcccccCC----ccccCCCCCCEEEccCCcc---cccCCccc-------cCCCCCCEEEccCCcccC-
Q 008012 3 RMQQLQGIGLADNHLQGSIP----YDLCQLKRLNSLSLQGNKL---NGSIPTCL-------ASLTSLRELRLNSNKLTS- 67 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~n~i---~~~~~~~~-------~~l~~L~~L~L~~N~l~~- 67 (581)
.+++|++|+|++|+|+...+ ..+..+++|++|+|++|.+ ++..|..+ ..+++|++|+|++|.+++
T Consensus 30 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 109 (386)
T 2ca6_A 30 EDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPT 109 (386)
T ss_dssp HCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTT
T ss_pred cCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHH
Confidence 35667777777777765433 3355677777777777533 33334333 566777777777777765
Q ss_pred ---CCCcccccCCCCcEEecccCcCCCCCCcccc----CC---------ccCcEEeCCCCcCC-CCCc---ccccCcccc
Q 008012 68 ---SIPSALWALEYILYVNLSSNYLTGSLTSDIQ----NM---------KVLIDLDLSRNQLS-GDIP---KTIAGLKDL 127 (581)
Q Consensus 68 ---~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~----~l---------~~L~~L~l~~N~l~-~~~~---~~~~~l~~L 127 (581)
.+|..+..+++|++|+|++|.++...+..+. .+ ++|++|++++|+++ +..+ ..+..+++|
T Consensus 110 ~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 189 (386)
T 2ca6_A 110 AQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 189 (386)
T ss_dssp THHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCc
Confidence 3555666777777777777776533333232 22 67777777777765 2333 345566677
Q ss_pred cceecccccccc-----ccCccccCccccceeeccccccC----CCCchhhhcccccCeeEccCCCCCCC----CCCC--
Q 008012 128 TNLSLAGNQFQG-----PIPESFGSLISLESLDLSSNNLS----EGIPKSLVALSHLKQFNVSHNRLEGE----IPTE-- 192 (581)
Q Consensus 128 ~~L~l~~N~i~~-----~~~~~~~~l~~L~~L~l~~N~l~----~~~~~~~~~l~~L~~l~l~~n~l~~~----~~~~-- 192 (581)
+.|+|++|+|+. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|+.|+|++|++++. ++..
T Consensus 190 ~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~ 269 (386)
T 2ca6_A 190 HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFS 269 (386)
T ss_dssp CEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHH
T ss_pred CEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHh
Confidence 777777776652 23335666667777777777764 34555666667777777777766643 1211
Q ss_pred -CCCcCCccccccccccc
Q 008012 193 -GPFRNFSAQSFHWNYAL 209 (581)
Q Consensus 193 -~~~~~~~~~~~~~n~~~ 209 (581)
..+..+..+++.+|...
T Consensus 270 ~~~~~~L~~L~L~~n~i~ 287 (386)
T 2ca6_A 270 KLENIGLQTLRLQYNEIE 287 (386)
T ss_dssp TCSSCCCCEEECCSSCCB
T ss_pred hccCCCeEEEECcCCcCC
Confidence 22455666666665433
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=4.8e-20 Score=195.98 Aligned_cols=180 Identities=26% Similarity=0.283 Sum_probs=143.0
Q ss_pred CCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecc
Q 008012 6 QLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLS 85 (581)
Q Consensus 6 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 85 (581)
+|+.|+|++|+|++ +|..+. ++|++|+|++|.|+ .+| ..+++|++|+|++|+|++ +|. +.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78999999999986 676554 88999999999999 566 457899999999999985 666 555 89999999
Q ss_pred cCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCC
Q 008012 86 SNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGI 165 (581)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 165 (581)
+|+|++ +|. .+++|++|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|.|+. +
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~-l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLES-L 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSS-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCc-h
Confidence 999986 554 67899999999999985 665 57889999999999986 555 65 899999999999984 5
Q ss_pred chhhhccccc-------CeeEccCCCCCCCCCCCCCCcCCccccccccccccCC
Q 008012 166 PKSLVALSHL-------KQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGP 212 (581)
Q Consensus 166 ~~~~~~l~~L-------~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 212 (581)
|. +.. +| +.|+|++|+|+..++....+..+..+++.+|+..+..
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~L~~N~l~~~~ 246 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILEDNPLSSRI 246 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCCCCCGGGGGSCTTEEEECCSSSCCHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcceecCHHHhcCCCCCEEEeeCCcCCCcC
Confidence 55 544 67 8999999999865444566888888888888876643
No 349
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.83 E-value=5.2e-21 Score=184.81 Aligned_cols=171 Identities=21% Similarity=0.305 Sum_probs=146.0
Q ss_pred CCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEe
Q 008012 4 MQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVN 83 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 83 (581)
+.++..++|++|.+++. + .+..+++|++|++++|.|+. ++ .+..+++|++|+|++|+|++..+ +..+++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 45677888999999854 3 68889999999999999994 45 78999999999999999996544 99999999999
Q ss_pred cccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCC
Q 008012 84 LSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 84 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 163 (581)
+++|++++. +. +.. ++|++|++++|++++ + +.+.++++|+.|+|++|+|++. + .+..+++|+.|++++|.+++
T Consensus 92 L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~-~-~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNL-NG-IPS-ACLSRLFLDNNELRD-T-DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCC-TT-CCC-SSCCEEECCSSCCSB-S-GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCc-Cc-ccc-CcccEEEccCCccCC-C-hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 999999954 33 333 999999999999985 3 3689999999999999999965 3 68889999999999999987
Q ss_pred CCchhhhcccccCeeEccCCCCCCCC
Q 008012 164 GIPKSLVALSHLKQFNVSHNRLEGEI 189 (581)
Q Consensus 164 ~~~~~~~~l~~L~~l~l~~n~l~~~~ 189 (581)
. ..+..+++|+.|++++|++++..
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECCC
T ss_pred h--HHhccCCCCCEEeCCCCcccCCc
Confidence 5 67889999999999999998653
No 350
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.82 E-value=2.2e-20 Score=172.27 Aligned_cols=153 Identities=19% Similarity=0.262 Sum_probs=131.9
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
.+++|++|++++|+|+ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|++++..+..+..+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 4678999999999998 556 6899999999999999887 34578999999999999999998788889999999999
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCCCc-CCCCCcccccCcccccceeccccccccccCccccCccccceeecccccc
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQ-LSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNL 161 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l 161 (581)
++++|++++..+..+..+++|++|++++|. ++ .+| .+.++++|+.|++++|++++. + .+..+++|+.|++++|++
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 999999997788889999999999999998 66 555 689999999999999999864 3 788899999999999998
Q ss_pred CC
Q 008012 162 SE 163 (581)
Q Consensus 162 ~~ 163 (581)
.+
T Consensus 194 ~~ 195 (197)
T 4ezg_A 194 GG 195 (197)
T ss_dssp --
T ss_pred CC
Confidence 64
No 351
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.82 E-value=2.6e-21 Score=194.42 Aligned_cols=181 Identities=22% Similarity=0.246 Sum_probs=106.7
Q ss_pred CCCCCcEEEeecCccccc-CCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCC-cccCC-CCcccccCCCC
Q 008012 3 RMQQLQGIGLADNHLQGS-IPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSN-KLTSS-IPSALWALEYI 79 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~~L 79 (581)
.+++|++|+|++|.+++. ++..+..+++|++|+|++|.+++..+..++.+++|++|+|++| .+++. ++..+.++++|
T Consensus 91 ~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L 170 (336)
T 2ast_B 91 SPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRL 170 (336)
T ss_dssp CCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTC
T ss_pred cCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCC
Confidence 355666666666666544 5555666666666666666666555566666666666666666 45532 44555666666
Q ss_pred cEEecccC-cCCCC-CCccccCCc-cCcEEeCCCC--cCC-CCCcccccCcccccceeccccc-cccccCccccCccccc
Q 008012 80 LYVNLSSN-YLTGS-LTSDIQNMK-VLIDLDLSRN--QLS-GDIPKTIAGLKDLTNLSLAGNQ-FQGPIPESFGSLISLE 152 (581)
Q Consensus 80 ~~L~l~~n-~l~~~-~~~~~~~l~-~L~~L~l~~N--~l~-~~~~~~~~~l~~L~~L~l~~N~-i~~~~~~~~~~l~~L~ 152 (581)
++|++++| .+++. .+..+..++ +|++|++++| .++ +.+|..+.++++|+.|++++|. +++..+..+..+++|+
T Consensus 171 ~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~ 250 (336)
T 2ast_B 171 DELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQ 250 (336)
T ss_dssp CEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCC
T ss_pred CEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCC
Confidence 66666666 66532 344455666 6666666666 333 2344555566666666666666 5555555666666666
Q ss_pred eeeccccc-cCCCCchhhhcccccCeeEccCC
Q 008012 153 SLDLSSNN-LSEGIPKSLVALSHLKQFNVSHN 183 (581)
Q Consensus 153 ~L~l~~N~-l~~~~~~~~~~l~~L~~l~l~~n 183 (581)
.|++++|. ++......+..+++|+.|++++|
T Consensus 251 ~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 251 HLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred EeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 66666664 22111124556666666666666
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.8e-20 Score=201.43 Aligned_cols=194 Identities=22% Similarity=0.352 Sum_probs=167.1
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
..+..+.|.++.++...+ +..|++|+.|+|++|.|... + .|..+++|+.|+|++|+|++..+ +..+++|+.|+|
T Consensus 21 ~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 345566778888875544 57789999999999999954 4 59999999999999999996554 999999999999
Q ss_pred ccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCC
Q 008012 85 SSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEG 164 (581)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~ 164 (581)
++|.|++ ++ .+..+++|++|+|++|.|++ + +.+..+++|+.|+|++|.|++. ..|..+++|+.|+|++|.+++.
T Consensus 95 s~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 95 DENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp CSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred cCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 9999995 33 78999999999999999995 3 4689999999999999999975 6789999999999999999986
Q ss_pred CchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccCCC
Q 008012 165 IPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 165 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
.| +..+++|+.|+|++|++++. +....+..+..+.+.+|+....+.
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECCCC
T ss_pred hh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCCcc
Confidence 55 99999999999999999964 667788899999999998765543
No 353
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.81 E-value=7.5e-22 Score=202.37 Aligned_cols=212 Identities=19% Similarity=0.228 Sum_probs=171.8
Q ss_pred CCCCCCCcEEEeecC---cccccCCccc-------cCCCCCCEEEccCCcccc----cCCccccCCCCCCEEEccCCccc
Q 008012 1 MGRMQQLQGIGLADN---HLQGSIPYDL-------CQLKRLNSLSLQGNKLNG----SIPTCLASLTSLRELRLNSNKLT 66 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n---~l~~~~~~~~-------~~l~~L~~L~l~~n~i~~----~~~~~~~~l~~L~~L~L~~N~l~ 66 (581)
|..+++|++|+|++| ++++.+|..+ ..+++|++|+|++|.|+. .++..+.++++|++|+|++|.|+
T Consensus 56 l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 56 IASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp TTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred HHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 457899999999996 4445556555 789999999999999996 46778899999999999999997
Q ss_pred CCCCccc----ccC---------CCCcEEecccCcCC-CCCC---ccccCCccCcEEeCCCCcCCC-----CCcccccCc
Q 008012 67 SSIPSAL----WAL---------EYILYVNLSSNYLT-GSLT---SDIQNMKVLIDLDLSRNQLSG-----DIPKTIAGL 124 (581)
Q Consensus 67 ~~~~~~~----~~l---------~~L~~L~l~~n~l~-~~~~---~~~~~l~~L~~L~l~~N~l~~-----~~~~~~~~l 124 (581)
+..+..+ ..+ ++|++|+|++|+++ ...+ ..+..+++|++|++++|+++. ..+..+..+
T Consensus 136 ~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~ 215 (386)
T 2ca6_A 136 PQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYC 215 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGC
T ss_pred HHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcC
Confidence 5444433 344 89999999999997 3344 467789999999999999973 344478899
Q ss_pred ccccceeccccccc----cccCccccCccccceeeccccccCCC----Cchhhhc--ccccCeeEccCCCCCC----CCC
Q 008012 125 KDLTNLSLAGNQFQ----GPIPESFGSLISLESLDLSSNNLSEG----IPKSLVA--LSHLKQFNVSHNRLEG----EIP 190 (581)
Q Consensus 125 ~~L~~L~l~~N~i~----~~~~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~--l~~L~~l~l~~n~l~~----~~~ 190 (581)
++|+.|+|++|.|+ ..+|..+..+++|+.|+|++|.+++. ++..+.. +++|+.|+|++|+++. .+|
T Consensus 216 ~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~ 295 (386)
T 2ca6_A 216 QELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLK 295 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHH
T ss_pred CCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHH
Confidence 99999999999996 56788899999999999999999875 4556643 8999999999999997 244
Q ss_pred CC--CCCcCCccccccccccccCC
Q 008012 191 TE--GPFRNFSAQSFHWNYALCGP 212 (581)
Q Consensus 191 ~~--~~~~~~~~~~~~~n~~~c~~ 212 (581)
.. ..+..+..+++.+|+.....
T Consensus 296 ~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 296 TVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHhcCCCceEEEccCCcCCcch
Confidence 43 34678889999988766444
No 354
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.81 E-value=1.2e-19 Score=166.45 Aligned_cols=176 Identities=24% Similarity=0.318 Sum_probs=92.8
Q ss_pred CEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCc-ccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCC
Q 008012 32 NSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPS-ALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSR 110 (581)
Q Consensus 32 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 110 (581)
++|++++|.|+ .+|..+.. +|++|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 45555555555 33433322 555555555555544332 355555666666666666555555566666666666666
Q ss_pred CcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCC
Q 008012 111 NQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIP 190 (581)
Q Consensus 111 N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~ 190 (581)
|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|+.|+|++|.+++..+... -...++...+.++...+..|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~-~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW-FAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH-HHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchH-HHHHHHHcCCCCCCCCCCCC
Confidence 66665555555666666666666666665556666666666666666666655332110 01112222334444444444
Q ss_pred CCCCCcCCccccccccccccCCC
Q 008012 191 TEGPFRNFSAQSFHWNYALCGPQ 213 (581)
Q Consensus 191 ~~~~~~~~~~~~~~~n~~~c~~~ 213 (581)
.. +......++..+...|...
T Consensus 167 ~~--l~~~~l~~l~~~~~~C~~~ 187 (192)
T 1w8a_A 167 SK--VRDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp TT--TTTSBGGGSCTTTCCCCCC
T ss_pred hH--HcCCChhhCcHhhcCcCCC
Confidence 32 3344555555566666644
No 355
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=1.4e-19 Score=192.34 Aligned_cols=163 Identities=25% Similarity=0.374 Sum_probs=140.4
Q ss_pred CCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEe
Q 008012 4 MQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVN 83 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 83 (581)
+++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|+.|+
T Consensus 79 ~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 146 (571)
T 3cvr_A 79 PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYIN 146 (571)
T ss_dssp CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEe
Confidence 467999999999999 677 457999999999999996 666 665 99999999999996 565 689999999
Q ss_pred cccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCcccc-------ceeec
Q 008012 84 LSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISL-------ESLDL 156 (581)
Q Consensus 84 l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L-------~~L~l 156 (581)
|++|.|++ +|. .+++|++|+|++|.|++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|
T Consensus 147 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~L 214 (571)
T 3cvr_A 147 ADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRC 214 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEEC
T ss_pred CCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEec
Confidence 99999995 555 57899999999999995 777 66 89999999999999 5666 654 77 99999
Q ss_pred cccccCCCCchhhhcccccCeeEccCCCCCCCCCC
Q 008012 157 SSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPT 191 (581)
Q Consensus 157 ~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~ 191 (581)
++|.|+. +|..+..+++|+.|+|++|++++.+|.
T Consensus 215 s~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 215 RENRITH-IPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred CCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 9999985 788888899999999999999987664
No 356
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.81 E-value=8e-20 Score=184.51 Aligned_cols=206 Identities=15% Similarity=0.151 Sum_probs=164.2
Q ss_pred CCCCCCCcEEEeecCcccccCC-ccccCCCCCCE-EEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCC
Q 008012 1 MGRMQQLQGIGLADNHLQGSIP-YDLCQLKRLNS-LSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEY 78 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~-L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 78 (581)
|+.+++|++|+|++|++.+.+| +.|.++++|.. ++++.|+|+.+.|+.|.++++|++|++++|+|+...+..+....+
T Consensus 50 f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 129 (350)
T 4ay9_X 50 FSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQ 129 (350)
T ss_dssp STTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSS
T ss_pred HcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccch
Confidence 5789999999999999865555 57899998775 777889999888999999999999999999999777777888889
Q ss_pred CcEEeccc-CcCCCCCCccccCCc-cCcEEeCCCCcCCCCCcccccCcccccceeccc-cccccccCccccCccccceee
Q 008012 79 ILYVNLSS-NYLTGSLTSDIQNMK-VLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAG-NQFQGPIPESFGSLISLESLD 155 (581)
Q Consensus 79 L~~L~l~~-n~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~-N~i~~~~~~~~~~l~~L~~L~ 155 (581)
+..|++.+ |++....+..|..+. .|+.|++++|+|+ .+|.......+|+.|++++ |.++.+.+..|..+++|+.|+
T Consensus 130 l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~Ld 208 (350)
T 4ay9_X 130 KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILD 208 (350)
T ss_dssp CEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEE
T ss_pred hhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhh
Confidence 99999966 578766667787765 6999999999999 5666666678999999975 778866667899999999999
Q ss_pred ccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccccC
Q 008012 156 LSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYALCG 211 (581)
Q Consensus 156 l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~ 211 (581)
|++|+|+.+.+..+. +|+.|.+.++.--..+|....+..+..+.+. +++.|.
T Consensus 209 Ls~N~l~~lp~~~~~---~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l~-~~~~c~ 260 (350)
T 4ay9_X 209 ISRTRIHSLPSYGLE---NLKKLRARSTYNLKKLPTLEKLVALMEASLT-YPSHCC 260 (350)
T ss_dssp CTTSCCCCCCSSSCT---TCCEEECTTCTTCCCCCCTTTCCSCCEEECS-CHHHHH
T ss_pred cCCCCcCccChhhhc---cchHhhhccCCCcCcCCCchhCcChhhCcCC-CCcccc
Confidence 999999975555554 4555555444323366767778888877775 556664
No 357
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.81 E-value=4e-21 Score=195.09 Aligned_cols=204 Identities=22% Similarity=0.290 Sum_probs=149.5
Q ss_pred CCCCcEEEeecCcccccCC----ccccCCC-CCCEEEccCCcccccCCccccCC-----CCCCEEEccCCcccCCCCccc
Q 008012 4 MQQLQGIGLADNHLQGSIP----YDLCQLK-RLNSLSLQGNKLNGSIPTCLASL-----TSLRELRLNSNKLTSSIPSAL 73 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~l~~n~i~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~ 73 (581)
.++|++|+|++|+|++..+ ..|.+++ +|++|+|++|.|++..+..|..+ ++|++|+|++|++++..+..+
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 3458999999999886666 7788888 89999999999987777777665 889999999999886666544
Q ss_pred c----cC-CCCcEEecccCcCCCCCCcccc----C-CccCcEEeCCCCcCCCCCcc----cccCcc-cccceeccccccc
Q 008012 74 W----AL-EYILYVNLSSNYLTGSLTSDIQ----N-MKVLIDLDLSRNQLSGDIPK----TIAGLK-DLTNLSLAGNQFQ 138 (581)
Q Consensus 74 ~----~l-~~L~~L~l~~n~l~~~~~~~~~----~-l~~L~~L~l~~N~l~~~~~~----~~~~l~-~L~~L~l~~N~i~ 138 (581)
. .+ ++|++|+|++|.|++..+..+. . .++|++|+|++|.+++..+. .+..++ +|+.|+|++|+|+
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 3 34 7899999999998866554443 3 36899999999988854433 334554 8899999999888
Q ss_pred cccCcccc----Cc-cccceeeccccccCCC----Cchhhhc-ccccCeeEccCCCCCCCCCC-----CCCCcCCccccc
Q 008012 139 GPIPESFG----SL-ISLESLDLSSNNLSEG----IPKSLVA-LSHLKQFNVSHNRLEGEIPT-----EGPFRNFSAQSF 203 (581)
Q Consensus 139 ~~~~~~~~----~l-~~L~~L~l~~N~l~~~----~~~~~~~-l~~L~~l~l~~n~l~~~~~~-----~~~~~~~~~~~~ 203 (581)
+..+..+. .+ ++|+.|+|++|.+++. ++..+.. .++|+.|+|++|+++...+. ...+..++.+.+
T Consensus 181 ~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L 260 (362)
T 3goz_A 181 SKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYL 260 (362)
T ss_dssp GSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEE
T ss_pred hhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEe
Confidence 76664443 44 5899999999988764 3444544 35899999999988864431 244566777777
Q ss_pred cccc
Q 008012 204 HWNY 207 (581)
Q Consensus 204 ~~n~ 207 (581)
.+|.
T Consensus 261 ~~n~ 264 (362)
T 3goz_A 261 DYDI 264 (362)
T ss_dssp EHHH
T ss_pred ccCC
Confidence 7765
No 358
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81 E-value=1.1e-19 Score=174.97 Aligned_cols=137 Identities=20% Similarity=0.236 Sum_probs=107.9
Q ss_pred CCcCCeecccccccEEEEEe-CCCcE--EEEEEeccchH------------------------HHHHHHHHHHHHHHhcC
Q 008012 293 FNECNLLGSGGFGSVYKGIL-SDGTT--VAIKIFNLQLE------------------------QAFRSFNSECEVLRNVR 345 (581)
Q Consensus 293 y~~~~~lg~G~~~~v~~~~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~e~~~l~~l~ 345 (581)
|++.+.||+|+||.||+|.. .+|+. ||||+++.... .....+.+|+++++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999997 67899 99998754321 11236789999999998
Q ss_pred CCcc--ceEeeeeecCCeeeEEEeccCC-C----CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCC
Q 008012 346 HRNL--IKILSSCCNTNFKALVLEFMPN-G----SLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLK 418 (581)
Q Consensus 346 h~~i--v~~~~~~~~~~~~~lv~e~~~~-~----~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dik 418 (581)
|+++ ..++++ +..++||||+.+ | +|.++.... ++..+..++.|++.||.|||. +.||+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~----~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGREL----KELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGG----GGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhcc----ChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 7754 344432 356899999942 3 777765431 345678899999999999995 5789999999
Q ss_pred CCCeEecCCCcEEEeeccCceec
Q 008012 419 PSNILLDENMVAHVSDFGISKLL 441 (581)
Q Consensus 419 p~Nill~~~~~~kl~Dfg~a~~~ 441 (581)
|+|||++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999988 9999999999865
No 359
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.80 E-value=4.7e-21 Score=192.59 Aligned_cols=179 Identities=19% Similarity=0.253 Sum_probs=119.6
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCccccc-CCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEe
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGS-IPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVN 83 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 83 (581)
++++.|++++|.+++..+. +..+++|++|+|++|.+++. .+..+.++++|++|+|++|++++..+..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5667777777777754444 44577777777777777644 566677777777777777777666666677777777777
Q ss_pred cccC-cCCC-CCCccccCCccCcEEeCCCC-cCCCC-CcccccCcc-cccceecccc--ccc-cccCccccCccccceee
Q 008012 84 LSSN-YLTG-SLTSDIQNMKVLIDLDLSRN-QLSGD-IPKTIAGLK-DLTNLSLAGN--QFQ-GPIPESFGSLISLESLD 155 (581)
Q Consensus 84 l~~n-~l~~-~~~~~~~~l~~L~~L~l~~N-~l~~~-~~~~~~~l~-~L~~L~l~~N--~i~-~~~~~~~~~l~~L~~L~ 155 (581)
+++| .+++ .++..+..+++|++|++++| .+++. ++..+..++ +|+.|+|++| .++ +.++..+..+++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 7777 4553 24445666777777777777 66643 455566677 7777777777 343 23455566677777777
Q ss_pred ccccc-cCCCCchhhhcccccCeeEccCCC
Q 008012 156 LSSNN-LSEGIPKSLVALSHLKQFNVSHNR 184 (581)
Q Consensus 156 l~~N~-l~~~~~~~~~~l~~L~~l~l~~n~ 184 (581)
+++|. +++..+..+..+++|+.|++++|.
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 77777 555566667777777777777774
No 360
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=1.1e-19 Score=175.48 Aligned_cols=149 Identities=23% Similarity=0.336 Sum_probs=131.9
Q ss_pred CCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEE
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYV 82 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 82 (581)
.+++|++|++++|+|+. ++ .+..+++|++|+|++|+|++..+ |.++++|++|+|++|++++ +|.... ++|++|
T Consensus 39 ~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L 111 (263)
T 1xeu_A 39 ELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRL 111 (263)
T ss_dssp HHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEE
T ss_pred hcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcccc--CcccEE
Confidence 57899999999999994 55 78999999999999999996544 9999999999999999985 444333 999999
Q ss_pred ecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccC
Q 008012 83 NLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLS 162 (581)
Q Consensus 83 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~ 162 (581)
++++|+|++. ..+..+++|++|++++|++++ ++ .+..+++|+.|+|++|+|++. ..+..+++|+.|++++|.++
T Consensus 112 ~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~-~~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 112 FLDNNELRDT--DSLIHLKNLEILSIRNNKLKS-IV-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp ECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB-CG-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred EccCCccCCC--hhhcCcccccEEECCCCcCCC-Ch-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 9999999953 369999999999999999995 44 689999999999999999976 77899999999999999998
Q ss_pred CC
Q 008012 163 EG 164 (581)
Q Consensus 163 ~~ 164 (581)
+.
T Consensus 186 ~~ 187 (263)
T 1xeu_A 186 NE 187 (263)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 361
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.80 E-value=1.5e-19 Score=165.81 Aligned_cols=175 Identities=23% Similarity=0.274 Sum_probs=143.4
Q ss_pred cEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCc-cccCCCCCCEEEccCCcccCCCCcccccCCCCcEEeccc
Q 008012 8 QGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPT-CLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSS 86 (581)
Q Consensus 8 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 86 (581)
+.|++++|+++ .+|..+. .+|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78999999998 6787666 4999999999999977664 599999999999999999988899999999999999999
Q ss_pred CcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCc-cccCccccceeeccccccCCCC
Q 008012 87 NYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPE-SFGSLISLESLDLSSNNLSEGI 165 (581)
Q Consensus 87 n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~-~~~~l~~L~~L~l~~N~l~~~~ 165 (581)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+- ++ ...|+...+..+......
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~--~~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF--AEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHH--HHHHHHHCCSGGGCBBCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHH--HHHHHHcCCCCCCCCCCC
Confidence 999988888899999999999999999988899999999999999999999864331 11 112334445556565556
Q ss_pred chhhhcccccCeeEccCCCCCCCCC
Q 008012 166 PKSLVALSHLKQFNVSHNRLEGEIP 190 (581)
Q Consensus 166 ~~~~~~l~~L~~l~l~~n~l~~~~~ 190 (581)
|..+.+ ....++..+.+++..+
T Consensus 166 P~~l~~---~~l~~l~~~~~~C~~~ 187 (192)
T 1w8a_A 166 PSKVRD---VQIKDLPHSEFKCSSE 187 (192)
T ss_dssp STTTTT---SBGGGSCTTTCCCCCC
T ss_pred ChHHcC---CChhhCcHhhcCcCCC
Confidence 665544 4455667777766543
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=4.7e-22 Score=212.52 Aligned_cols=184 Identities=22% Similarity=0.266 Sum_probs=157.2
Q ss_pred CCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCc-------------ccccCCccccCCCCCCEEE-ccCCcccC
Q 008012 2 GRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNK-------------LNGSIPTCLASLTSLRELR-LNSNKLTS 67 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-------------i~~~~~~~~~~l~~L~~L~-L~~N~l~~ 67 (581)
...++|+.|+|++|+|+ .+|..+++|++|+.|++++|. +.+..|..++++++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 45788999999999998 789999999999999998875 4567788889999999998 66665441
Q ss_pred CCCc------cccc--CCCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceecccccccc
Q 008012 68 SIPS------ALWA--LEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQG 139 (581)
Q Consensus 68 ~~~~------~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~ 139 (581)
++. .+.. ...|+.|+|++|+|++ +|. ++.+++|+.|+|++|.|+ .+|..|+++++|+.|+|++|+|++
T Consensus 425 -L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~ 500 (567)
T 1dce_A 425 -LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN 500 (567)
T ss_dssp -HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred -hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC
Confidence 111 1111 1359999999999995 565 999999999999999999 789999999999999999999996
Q ss_pred ccCccccCccccceeeccccccCCCC-chhhhcccccCeeEccCCCCCCCCCCC
Q 008012 140 PIPESFGSLISLESLDLSSNNLSEGI-PKSLVALSHLKQFNVSHNRLEGEIPTE 192 (581)
Q Consensus 140 ~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~n~l~~~~~~~ 192 (581)
+| .|+.+++|+.|+|++|.|++.. |..+..+++|+.|+|++|++++.+|..
T Consensus 501 -lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 501 -VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp -CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred -Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 56 8999999999999999999876 999999999999999999999877654
No 363
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.79 E-value=1.3e-18 Score=187.35 Aligned_cols=54 Identities=33% Similarity=0.362 Sum_probs=28.8
Q ss_pred cccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccc
Q 008012 149 ISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYAL 209 (581)
Q Consensus 149 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~ 209 (581)
++|+.|+|++|.+++ +| ..+++|+.|++++|+++. +|. .+..+..+++.+|...
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~--~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM--LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc--ccccCcEEeCCCCCCC
Confidence 456666666666654 33 334556666666666663 222 3344555555555433
No 364
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.78 E-value=2.3e-20 Score=189.50 Aligned_cols=201 Identities=19% Similarity=0.200 Sum_probs=162.2
Q ss_pred EEEeecCcccccCCccccCCCCCCEEEccCCcccccCC----ccccCCC-CCCEEEccCCcccCCCCcccccC-----CC
Q 008012 9 GIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIP----TCLASLT-SLRELRLNSNKLTSSIPSALWAL-----EY 78 (581)
Q Consensus 9 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~ 78 (581)
.++|+.|++++.+|..+...++|++|+|++|.|++..+ +.|.+++ +|++|+|++|+|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999888888877889999999999997766 7889999 99999999999998878777775 99
Q ss_pred CcEEecccCcCCCCCCccc----cCC-ccCcEEeCCCCcCCCCCcccccC-----cccccceeccccccccccC----cc
Q 008012 79 ILYVNLSSNYLTGSLTSDI----QNM-KVLIDLDLSRNQLSGDIPKTIAG-----LKDLTNLSLAGNQFQGPIP----ES 144 (581)
Q Consensus 79 L~~L~l~~n~l~~~~~~~~----~~l-~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~L~l~~N~i~~~~~----~~ 144 (581)
|++|+|++|.+++..+..+ ..+ ++|++|+|++|.+++..+..+.. .++|+.|+|++|.|++... ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999997666644 444 89999999999999766655543 3699999999999996443 34
Q ss_pred ccCcc-ccceeeccccccCCCCchhhhcc-----cccCeeEccCCCCCCCC----CC-CCC-CcCCccccccccccc
Q 008012 145 FGSLI-SLESLDLSSNNLSEGIPKSLVAL-----SHLKQFNVSHNRLEGEI----PT-EGP-FRNFSAQSFHWNYAL 209 (581)
Q Consensus 145 ~~~l~-~L~~L~l~~N~l~~~~~~~~~~l-----~~L~~l~l~~n~l~~~~----~~-~~~-~~~~~~~~~~~n~~~ 209 (581)
+..++ +|++|+|++|.+++..+..+... ++|+.|+|++|+++... +. ... ...+..+++.+|...
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 238 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLH 238 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 45565 99999999999998777666544 69999999999998622 11 111 236778888887543
No 365
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.77 E-value=9.7e-19 Score=156.85 Aligned_cols=133 Identities=27% Similarity=0.227 Sum_probs=87.0
Q ss_pred CCCCEEEccCCccc-ccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEe
Q 008012 29 KRLNSLSLQGNKLN-GSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLD 107 (581)
Q Consensus 29 ~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 107 (581)
++|++|+|++|.|+ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 66667777777666 45566666666777777777766643 5566666777777777776655666666667777777
Q ss_pred CCCCcCCCCC-cccccCcccccceeccccccccccC---ccccCccccceeeccccccCC
Q 008012 108 LSRNQLSGDI-PKTIAGLKDLTNLSLAGNQFQGPIP---ESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 108 l~~N~l~~~~-~~~~~~l~~L~~L~l~~N~i~~~~~---~~~~~l~~L~~L~l~~N~l~~ 163 (581)
+++|.+++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 7777776421 1566667777777777777765443 356667777777777777654
No 366
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.77 E-value=1.1e-18 Score=182.14 Aligned_cols=78 Identities=28% Similarity=0.408 Sum_probs=36.7
Q ss_pred ccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEc
Q 008012 101 KVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNV 180 (581)
Q Consensus 101 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 180 (581)
++|++|++++|.+++ +| .|+++++|++|++++|++++ +|..+ ++|++|++++|.+++ +| .+..+++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 345555555555553 34 35555555555555555543 23221 245555555555544 33 3444444555555
Q ss_pred cCCCCC
Q 008012 181 SHNRLE 186 (581)
Q Consensus 181 ~~n~l~ 186 (581)
++|+++
T Consensus 203 ~~N~l~ 208 (454)
T 1jl5_A 203 DNNSLK 208 (454)
T ss_dssp CSSCCS
T ss_pred CCCcCC
Confidence 544444
No 367
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=2.6e-19 Score=197.28 Aligned_cols=182 Identities=25% Similarity=0.290 Sum_probs=117.8
Q ss_pred CCCcEEEeecCcccccCCccccCCCCC-----CEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCC
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRL-----NSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYI 79 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L-----~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 79 (581)
+.++.|+|.+|.++. .+..+.....| ..++++.|++. ..++.|..+++|+.|+|++|.|. .+|..+.++++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 457888898888885 44433222222 23344445555 56888899999999999999998 677777789999
Q ss_pred cEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeecccc
Q 008012 80 LYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSN 159 (581)
Q Consensus 80 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N 159 (581)
++|+|++|.|+ .+|..|.++++|++|+|++|.|+ .+|..|++|++|+.|+|++|.|+ .+|..|+.+++|+.|+|++|
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 99999999998 77888899999999999999998 77888999999999999999998 66777999999999999999
Q ss_pred ccCCCCchhhhcccc-cCeeEccCCCCCCCCCCC
Q 008012 160 NLSEGIPKSLVALSH-LKQFNVSHNRLEGEIPTE 192 (581)
Q Consensus 160 ~l~~~~~~~~~~l~~-L~~l~l~~n~l~~~~~~~ 192 (581)
.|++..|..+..+.. +..++|++|.+++.+|..
T Consensus 327 ~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 327 PLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred ccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 998888877765432 234788899998888764
No 368
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.76 E-value=1.4e-17 Score=179.16 Aligned_cols=176 Identities=29% Similarity=0.338 Sum_probs=79.7
Q ss_pred CCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecc
Q 008012 6 QLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLS 85 (581)
Q Consensus 6 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 85 (581)
+|++|+|++|+|+ .+|. .+++|++|+|++|+|+. +|. .+++|++|+|++|+|++ +|. .+++|+.|+++
T Consensus 62 ~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~ 129 (622)
T 3g06_A 62 HITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIF 129 (622)
T ss_dssp TCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECC
T ss_pred CCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECC
Confidence 4555555555555 2333 34555555555555552 332 34555555555555542 222 33444444444
Q ss_pred cCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccC-----------------cccccceeccccccccccCccccCc
Q 008012 86 SNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAG-----------------LKDLTNLSLAGNQFQGPIPESFGSL 148 (581)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-----------------l~~L~~L~l~~N~i~~~~~~~~~~l 148 (581)
+|+|++ +|.. +++|++|++++|.+++ +|..+.+ +++|+.|++++|.|++ +|. .+
T Consensus 130 ~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~---~~ 200 (622)
T 3g06_A 130 GNQLTS-LPVL---PPGLQELSVSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPT---LP 200 (622)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCC---CC
T ss_pred CCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCC---cc
Confidence 444442 2221 2444444555544442 2221111 1334444444444442 111 12
Q ss_pred cccceeeccccccCCCCchhhhcccccCeeEccCCCCCCCCCCCCCCcCCccccccccccc
Q 008012 149 ISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRLEGEIPTEGPFRNFSAQSFHWNYAL 209 (581)
Q Consensus 149 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~ 209 (581)
++|+.|++++|.++. +|. .+++|+.|++++|++++ +| ..+..+..+++.+|...
T Consensus 201 ~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp--~~l~~L~~L~Ls~N~L~ 254 (622)
T 3g06_A 201 SELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP--VLPSELKELMVSGNRLT 254 (622)
T ss_dssp TTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC--CCCTTCCEEECCSSCCS
T ss_pred chhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC--CCCCcCcEEECCCCCCC
Confidence 344444444444432 221 12566777777777765 33 23455666666666544
No 369
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.75 E-value=2.9e-18 Score=153.69 Aligned_cols=132 Identities=23% Similarity=0.212 Sum_probs=60.8
Q ss_pred CCCcEEEeecCccc-ccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEe
Q 008012 5 QQLQGIGLADNHLQ-GSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVN 83 (581)
Q Consensus 5 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 83 (581)
++|++|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..|..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34445555555444 33444444444555555555544432 4444444555555555554433444444444555555
Q ss_pred cccCcCCCCCC-ccccCCccCcEEeCCCCcCCCCCc---ccccCcccccceeccccccc
Q 008012 84 LSSNYLTGSLT-SDIQNMKVLIDLDLSRNQLSGDIP---KTIAGLKDLTNLSLAGNQFQ 138 (581)
Q Consensus 84 l~~n~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~L~l~~N~i~ 138 (581)
+++|.|++... ..+..+++|++|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 55554443211 344444445555555554443222 24444444555555544444
No 370
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.75 E-value=5.6e-18 Score=155.31 Aligned_cols=128 Identities=29% Similarity=0.395 Sum_probs=77.3
Q ss_pred CEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCC
Q 008012 32 NSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRN 111 (581)
Q Consensus 32 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 111 (581)
+++++++|.|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45566666665 3343332 35666666666665 44555666666666666666666555555666666666666666
Q ss_pred cCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCC
Q 008012 112 QLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 112 ~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 163 (581)
+|++..|..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 6665555556666666666666666665545556666666666666666654
No 371
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.75 E-value=3e-17 Score=171.22 Aligned_cols=161 Identities=25% Similarity=0.401 Sum_probs=110.4
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
++|++|+|++|++++ +| .|+++++|++|++++|+|++ +|..+ ++|++|+|++|++++ +| .+.++++|++|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 578899999999985 66 58888999999999998885 55433 588888888888875 45 5788888888888
Q ss_pred ccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCC
Q 008012 85 SSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEG 164 (581)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~ 164 (581)
++|++++ +|... ++|++|++++|.++ .+|. +.++++|+.|++++|++++ +|.. +++|+.|++++|.+++
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~- 271 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD- 271 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-
Confidence 8888874 33322 47777777777777 5553 6777777777777777774 3332 3566666666666654
Q ss_pred CchhhhcccccCeeEccCCCCCC
Q 008012 165 IPKSLVALSHLKQFNVSHNRLEG 187 (581)
Q Consensus 165 ~~~~~~~l~~L~~l~l~~n~l~~ 187 (581)
+|.. +++|+.|++++|++++
T Consensus 272 l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 272 LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCSE
T ss_pred cCcc---cCcCCEEECcCCccCc
Confidence 3322 2445555555555543
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=9.5e-19 Score=192.78 Aligned_cols=161 Identities=19% Similarity=0.215 Sum_probs=125.5
Q ss_pred eecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCC
Q 008012 12 LADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTG 91 (581)
Q Consensus 12 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 91 (581)
+..|.+. ..++.|..+++|+.|+|++|.|. .+|..+.++++|++|+|++|.|+ .+|..|.++++|++|+|++|.|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3334444 55788999999999999999999 67777779999999999999999 88999999999999999999999
Q ss_pred CCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccc-cceeeccccccCCCCchhhh
Q 008012 92 SLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLIS-LESLDLSSNNLSEGIPKSLV 170 (581)
Q Consensus 92 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~-L~~L~l~~N~l~~~~~~~~~ 170 (581)
.+|..|..|++|++|+|++|.|+ .+|..|+++++|+.|+|++|+|++.+|..+..+.. +..|+|++|.+++.+|..
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~-- 360 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE-- 360 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc--
Confidence 77999999999999999999998 78888999999999999999999988888765532 345889999999887764
Q ss_pred cccccCeeEccCC
Q 008012 171 ALSHLKQFNVSHN 183 (581)
Q Consensus 171 ~l~~L~~l~l~~n 183 (581)
|..|+++.|
T Consensus 361 ----l~~l~l~~n 369 (727)
T 4b8c_D 361 ----RRFIEINTD 369 (727)
T ss_dssp -------------
T ss_pred ----cceeEeecc
Confidence 455666666
No 373
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.75 E-value=2.6e-18 Score=150.68 Aligned_cols=127 Identities=24% Similarity=0.237 Sum_probs=72.9
Q ss_pred CCCCEEEccCCccc-ccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEe
Q 008012 29 KRLNSLSLQGNKLN-GSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLD 107 (581)
Q Consensus 29 ~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 107 (581)
++|+.|++++|.|+ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45556666666655 44555555566666666666665533 4455566666666666666544555555566666666
Q ss_pred CCCCcCCCC-CcccccCcccccceeccccccccccC---ccccCccccceeecc
Q 008012 108 LSRNQLSGD-IPKTIAGLKDLTNLSLAGNQFQGPIP---ESFGSLISLESLDLS 157 (581)
Q Consensus 108 l~~N~l~~~-~~~~~~~l~~L~~L~l~~N~i~~~~~---~~~~~l~~L~~L~l~ 157 (581)
+++|.+++. .+..+.++++|+.|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666532 22555666666666666666665443 345566666666654
No 374
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.73 E-value=1.8e-17 Score=151.88 Aligned_cols=127 Identities=20% Similarity=0.295 Sum_probs=91.0
Q ss_pred cEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccC
Q 008012 8 QGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSN 87 (581)
Q Consensus 8 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n 87 (581)
+.+++++|+|+ .+|..+. ++|++|+|++|.|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46777777777 4555544 57777777777777 55677777777777777777777666667777777777777777
Q ss_pred cCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccc
Q 008012 88 YLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQ 138 (581)
Q Consensus 88 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~ 138 (581)
+|++..+..|..+++|++|+|++|.|+...+..|..+++|+.|+|++|++.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 777666667777777777777777777544445777777777777777765
No 375
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.73 E-value=5.3e-18 Score=148.73 Aligned_cols=127 Identities=19% Similarity=0.198 Sum_probs=68.5
Q ss_pred CCCcEEEeecCccc-ccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEe
Q 008012 5 QQLQGIGLADNHLQ-GSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVN 83 (581)
Q Consensus 5 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 83 (581)
++|++|++++|+++ +.+|..+..+++|++|+|++|.|++. ..|.++++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555555 44555555555555555555555533 4455555555555555555544555555555555555
Q ss_pred cccCcCCCC-CCccccCCccCcEEeCCCCcCCCCCc---ccccCcccccceecc
Q 008012 84 LSSNYLTGS-LTSDIQNMKVLIDLDLSRNQLSGDIP---KTIAGLKDLTNLSLA 133 (581)
Q Consensus 84 l~~n~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~L~l~ 133 (581)
+++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 555555532 12445555555555555555553332 245555555555554
No 376
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.73 E-value=2.3e-17 Score=149.16 Aligned_cols=111 Identities=26% Similarity=0.238 Sum_probs=56.1
Q ss_pred CCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceec
Q 008012 53 TSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSL 132 (581)
Q Consensus 53 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 132 (581)
++|++|+|++|++++..+..|..+++|++|++++|+|++..+..|..+++|++|++++|.+++..+..+.++++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 34445555555544433344444555555555555554444444455555555555555555444444455555555555
Q ss_pred cccccccccCccccCccccceeeccccccCC
Q 008012 133 AGNQFQGPIPESFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 133 ~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~ 163 (581)
++|+|++..+..|..+++|+.|+|++|.+++
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 5555554444444555555555555555554
No 377
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.72 E-value=2.4e-19 Score=188.25 Aligned_cols=206 Identities=19% Similarity=0.211 Sum_probs=125.5
Q ss_pred CCCCCcEEEeecCcccccCCcccc-----CCCCCCEEEccCCccccc----CCccccCCCCCCEEEccCCcccCCC----
Q 008012 3 RMQQLQGIGLADNHLQGSIPYDLC-----QLKRLNSLSLQGNKLNGS----IPTCLASLTSLRELRLNSNKLTSSI---- 69 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~l~~n~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~~---- 69 (581)
.+++|++|+|++|.++...+..+. .+++|++|+|++|.|+.. ++..+..+++|++|+|++|++++..
T Consensus 168 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l 247 (461)
T 1z7x_W 168 AKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAEL 247 (461)
T ss_dssp HCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHH
T ss_pred hCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHH
Confidence 356777777777777654444433 255777777777777743 3556666777777777777776432
Q ss_pred -CcccccCCCCcEEecccCcCCCC----CCccccCCccCcEEeCCCCcCCCCCcccccCc-----ccccceecccccccc
Q 008012 70 -PSALWALEYILYVNLSSNYLTGS----LTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGL-----KDLTNLSLAGNQFQG 139 (581)
Q Consensus 70 -~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-----~~L~~L~l~~N~i~~ 139 (581)
+..+..+++|++|++++|.++.. ++..+..+++|++|++++|.+++..+..+... ++|+.|+|++|.+++
T Consensus 248 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 327 (461)
T 1z7x_W 248 CPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTA 327 (461)
T ss_dssp HHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred HHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCch
Confidence 22233567777777777777642 45556667777777777777654433333322 567777777777765
Q ss_pred c----cCccccCccccceeeccccccCCCCchhhhc-----ccccCeeEccCCCCCC----CCCCC-CCCcCCccccccc
Q 008012 140 P----IPESFGSLISLESLDLSSNNLSEGIPKSLVA-----LSHLKQFNVSHNRLEG----EIPTE-GPFRNFSAQSFHW 205 (581)
Q Consensus 140 ~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-----l~~L~~l~l~~n~l~~----~~~~~-~~~~~~~~~~~~~ 205 (581)
. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|++++|+++. .++.. ..+..+..+++.+
T Consensus 328 ~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~ 407 (461)
T 1z7x_W 328 ACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSN 407 (461)
T ss_dssp GGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCS
T ss_pred HHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCC
Confidence 4 3444555677777777777766544444432 4567777777777663 22221 3345566666666
Q ss_pred ccc
Q 008012 206 NYA 208 (581)
Q Consensus 206 n~~ 208 (581)
|+.
T Consensus 408 N~i 410 (461)
T 1z7x_W 408 NCL 410 (461)
T ss_dssp SSC
T ss_pred CCC
Confidence 643
No 378
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.72 E-value=4.5e-20 Score=193.84 Aligned_cols=206 Identities=20% Similarity=0.156 Sum_probs=162.5
Q ss_pred CCCCcEEEeecCcccccC----CccccCCCCCCEEEccCCcccccCCcccc-----CCCCCCEEEccCCcccCC----CC
Q 008012 4 MQQLQGIGLADNHLQGSI----PYDLCQLKRLNSLSLQGNKLNGSIPTCLA-----SLTSLRELRLNSNKLTSS----IP 70 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~i~~~~~~~~~-----~l~~L~~L~L~~N~l~~~----~~ 70 (581)
.++|++|+|++|++++.. +..+..+++|++|+|++|.|+...+..+. ..++|++|+|++|.+++. ++
T Consensus 141 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 220 (461)
T 1z7x_W 141 QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLC 220 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHH
T ss_pred CCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHH
Confidence 567999999999999643 56777889999999999999865444443 367999999999999864 57
Q ss_pred cccccCCCCcEEecccCcCCCCC-----CccccCCccCcEEeCCCCcCCCC----CcccccCcccccceecccccccccc
Q 008012 71 SALWALEYILYVNLSSNYLTGSL-----TSDIQNMKVLIDLDLSRNQLSGD----IPKTIAGLKDLTNLSLAGNQFQGPI 141 (581)
Q Consensus 71 ~~~~~l~~L~~L~l~~n~l~~~~-----~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~i~~~~ 141 (581)
..+..+++|++|++++|.+++.. +..+..+++|++|++++|.+++. ++..+.++++|+.|+|++|.+++..
T Consensus 221 ~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 300 (461)
T 1z7x_W 221 GIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEG 300 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHH
T ss_pred HHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHH
Confidence 77889999999999999987432 22334689999999999999853 5777888999999999999998655
Q ss_pred CccccC-----ccccceeeccccccCCC----CchhhhcccccCeeEccCCCCCCCCCCC------CCCcCCcccccccc
Q 008012 142 PESFGS-----LISLESLDLSSNNLSEG----IPKSLVALSHLKQFNVSHNRLEGEIPTE------GPFRNFSAQSFHWN 206 (581)
Q Consensus 142 ~~~~~~-----l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~n~l~~~~~~~------~~~~~~~~~~~~~n 206 (581)
+..+.. .++|+.|++++|.+++. ++..+..+++|+.|++++|+++...+.. .....+..+++.+|
T Consensus 301 ~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n 380 (461)
T 1z7x_W 301 ARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC 380 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC
Confidence 544443 36999999999999875 4566778899999999999987643221 11457788888877
Q ss_pred ccc
Q 008012 207 YAL 209 (581)
Q Consensus 207 ~~~ 209 (581)
...
T Consensus 381 ~i~ 383 (461)
T 1z7x_W 381 DVS 383 (461)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 379
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.71 E-value=2.7e-19 Score=191.13 Aligned_cols=174 Identities=21% Similarity=0.211 Sum_probs=140.6
Q ss_pred CCCCCCcEEEeecCc-------------ccccCCccccCCCCCCEEE-ccCCcccccCCc-----cccC--CCCCCEEEc
Q 008012 2 GRMQQLQGIGLADNH-------------LQGSIPYDLCQLKRLNSLS-LQGNKLNGSIPT-----CLAS--LTSLRELRL 60 (581)
Q Consensus 2 ~~~~~L~~L~l~~n~-------------l~~~~~~~~~~l~~L~~L~-l~~n~i~~~~~~-----~~~~--l~~L~~L~L 60 (581)
+++++|+.|++++|. +.+..|..++++++|+.|+ ++.|.+.....- .+.. ...|+.|+|
T Consensus 369 ~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~~n~i~~l~~~~L~~L~L 448 (567)
T 1dce_A 369 ESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHL 448 (567)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhhhhhcccccccCccCceEEEe
Confidence 346678888887664 5567788888899999988 666654321100 0111 135999999
Q ss_pred cCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccc
Q 008012 61 NSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGP 140 (581)
Q Consensus 61 ~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~ 140 (581)
++|+|++ +|. +..+++|+.|+|++|+|+ .+|..++.+++|++|+|++|.|++ +| .++++++|+.|+|++|+|++.
T Consensus 449 s~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~ 523 (567)
T 1dce_A 449 AHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQS 523 (567)
T ss_dssp TTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSS
T ss_pred cCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCC
Confidence 9999995 676 999999999999999999 788899999999999999999995 67 899999999999999999987
Q ss_pred c-CccccCccccceeeccccccCCCCch---hhhcccccCeeEc
Q 008012 141 I-PESFGSLISLESLDLSSNNLSEGIPK---SLVALSHLKQFNV 180 (581)
Q Consensus 141 ~-~~~~~~l~~L~~L~l~~N~l~~~~~~---~~~~l~~L~~l~l 180 (581)
. |..|+.+++|+.|+|++|.+++..|. .+..+++|+.|++
T Consensus 524 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 524 AAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp STTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 6 99999999999999999999985442 2345788998864
No 380
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.71 E-value=6.1e-17 Score=146.41 Aligned_cols=131 Identities=23% Similarity=0.239 Sum_probs=97.2
Q ss_pred CcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEeccc
Q 008012 7 LQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSS 86 (581)
Q Consensus 7 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 86 (581)
.+.+++++|+++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467778888877 4554443 6788888888888866666777788888888888888766666677788888888888
Q ss_pred CcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccc
Q 008012 87 NYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGP 140 (581)
Q Consensus 87 n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~ 140 (581)
|+|++..+..|..+++|++|++++|.+++..+..+..+++|+.|+|++|++.+.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 888766666677778888888888888755555567778888888888877753
No 381
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.70 E-value=1.8e-17 Score=165.45 Aligned_cols=136 Identities=14% Similarity=0.194 Sum_probs=101.6
Q ss_pred CCcCCeecccccccEEEEEeCCCcEEEEEEeccch------------------HH----HHHHHHHHHHHHHhcCCCccc
Q 008012 293 FNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQL------------------EQ----AFRSFNSECEVLRNVRHRNLI 350 (581)
Q Consensus 293 y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~------------------~~----~~~~~~~e~~~l~~l~h~~iv 350 (581)
|++.+.||+|++|.||+|...+|+.||||+++... .. ......+|...+.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 89999999999999999998899999999875321 00 011124567777777444332
Q ss_pred --eEeeeeecCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCC
Q 008012 351 --KILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENM 428 (581)
Q Consensus 351 --~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~ 428 (581)
..+++ ...++||||++|++|.++.. .+....++.|++.+|.+|| +.|||||||||.|||+++++
T Consensus 177 vp~p~~~----~~~~LVME~i~G~~L~~l~~-------~~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 177 VPEPIAQ----SRHTIVMSLVDALPMRQVSS-------VPDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCCEEEE----ETTEEEEECCSCEEGGGCCC-------CSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEE
T ss_pred CCeeeec----cCceEEEEecCCccHhhhcc-------cHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCC
Confidence 22222 12379999999988865432 2234568899999999999 88999999999999998776
Q ss_pred ----------cEEEeeccCceecC
Q 008012 429 ----------VAHVSDFGISKLLG 442 (581)
Q Consensus 429 ----------~~kl~Dfg~a~~~~ 442 (581)
.+.|+||+-+....
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETT
T ss_pred CcccccccccceEEEEeCCcccCC
Confidence 48999999887654
No 382
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.70 E-value=1.9e-17 Score=149.50 Aligned_cols=135 Identities=21% Similarity=0.224 Sum_probs=96.5
Q ss_pred cccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccC
Q 008012 24 DLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVL 103 (581)
Q Consensus 24 ~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 103 (581)
.+.++.+|++|+|++|.|+. ++......++|++|+|++|+|++. ..+..+++|++|++++|.|++..+..+..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 45667778888888888874 344333334788888888888754 567777888888888888875544555777888
Q ss_pred cEEeCCCCcCCCCCcc--cccCcccccceeccccccccccCc----cccCccccceeeccccccCC
Q 008012 104 IDLDLSRNQLSGDIPK--TIAGLKDLTNLSLAGNQFQGPIPE----SFGSLISLESLDLSSNNLSE 163 (581)
Q Consensus 104 ~~L~l~~N~l~~~~~~--~~~~l~~L~~L~l~~N~i~~~~~~----~~~~l~~L~~L~l~~N~l~~ 163 (581)
++|++++|.|+ .+|. .+.++++|+.|++++|+++. .|. .+..+++|+.|++++|.+..
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 88888888886 4555 67778888888888888873 444 37778888888888887653
No 383
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=6.6e-17 Score=161.63 Aligned_cols=185 Identities=15% Similarity=0.167 Sum_probs=151.7
Q ss_pred CCCCcEEEeecCccc--------------------ccCCccccC--------CCCCCEEEccCCcccccCCccccCCCCC
Q 008012 4 MQQLQGIGLADNHLQ--------------------GSIPYDLCQ--------LKRLNSLSLQGNKLNGSIPTCLASLTSL 55 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~--------------------~~~~~~~~~--------l~~L~~L~l~~n~i~~~~~~~~~~l~~L 55 (581)
+++|+.|||++|+|. .+.+..|.+ +++|+.|+|.+ .|+.+.+.+|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 678999999999998 445567888 99999999999 8888888999999999
Q ss_pred CEEEccCCcccCCCCcccccCCCCcEEecccCcC----CCCCCccc----------------------------------
Q 008012 56 RELRLNSNKLTSSIPSALWALEYILYVNLSSNYL----TGSLTSDI---------------------------------- 97 (581)
Q Consensus 56 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l----~~~~~~~~---------------------------------- 97 (581)
+.|+|++|.++...+.+|.++.++..+.+..+.. ..+...+|
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 9999999999877888888888888777666321 10111111
Q ss_pred ----------------cCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccc-eeeccccc
Q 008012 98 ----------------QNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLE-SLDLSSNN 160 (581)
Q Consensus 98 ----------------~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~-~L~l~~N~ 160 (581)
..+++|++|+|++|+++...+..|.++++|+.|+|.+| ++.+.+..|.++++|+ .|++.+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 12789999999999999666678999999999999998 8777788899999999 999998 7
Q ss_pred cCCCCchhhhcccccCeeEccCCCCCCCCCC
Q 008012 161 LSEGIPKSLVALSHLKQFNVSHNRLEGEIPT 191 (581)
Q Consensus 161 l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~ 191 (581)
++.+.+.+|.++++|+.|++++|+++...+.
T Consensus 285 l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~ 315 (329)
T 3sb4_A 285 VTAIEFGAFMGCDNLRYVLATGDKITTLGDE 315 (329)
T ss_dssp CCEECTTTTTTCTTEEEEEECSSCCCEECTT
T ss_pred ceEEchhhhhCCccCCEEEeCCCccCccchh
Confidence 7778889999999999999999999855443
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.68 E-value=3e-19 Score=164.82 Aligned_cols=152 Identities=23% Similarity=0.317 Sum_probs=73.4
Q ss_pred CCCCCEEEccCCcccccCCc------cccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCc
Q 008012 28 LKRLNSLSLQGNKLNGSIPT------CLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMK 101 (581)
Q Consensus 28 l~~L~~L~l~~n~i~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 101 (581)
...++.++++.|.+++..|. .|..+++|++|+|++|+|++ +| .+..+++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34444444444444443333 44455555555555555543 33 4455555555555555554 3344444445
Q ss_pred cCcEEeCCCCcCCCCCcccccCcccccceeccccccccccC-ccccCccccceeeccccccCCCCch----------hhh
Q 008012 102 VLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIP-ESFGSLISLESLDLSSNNLSEGIPK----------SLV 170 (581)
Q Consensus 102 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~----------~~~ 170 (581)
+|++|++++|++++ +| .+.++++|+.|++++|+|++..+ ..+..+++|++|++++|.+++..|. .+.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 55555555555552 23 34455555555555555553222 2445555555555555555443322 245
Q ss_pred cccccCeeEccCCCCC
Q 008012 171 ALSHLKQFNVSHNRLE 186 (581)
Q Consensus 171 ~l~~L~~l~l~~n~l~ 186 (581)
.+++|+.|| +|.++
T Consensus 172 ~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 172 RLPNLKKLD--GMPVD 185 (198)
T ss_dssp HCSSCSEEC--CGGGT
T ss_pred hCCCcEEEC--CcccC
Confidence 556666554 44444
No 385
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.68 E-value=5.2e-17 Score=146.67 Aligned_cols=129 Identities=17% Similarity=0.191 Sum_probs=56.5
Q ss_pred CCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEe
Q 008012 4 MQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVN 83 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 83 (581)
+++|++|+|++|+++. +|......++|++|+|++|.|++. ..|..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 3344444444444442 232111122444444444444432 3444444444444444444433333334444444444
Q ss_pred cccCcCCCCCCc--cccCCccCcEEeCCCCcCCCCCccc----ccCcccccceecccccc
Q 008012 84 LSSNYLTGSLTS--DIQNMKVLIDLDLSRNQLSGDIPKT----IAGLKDLTNLSLAGNQF 137 (581)
Q Consensus 84 l~~n~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~----~~~l~~L~~L~l~~N~i 137 (581)
+++|+|+ .+|. .+..+++|++|++++|.++ ..|.. +..+++|+.|++++|.+
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCH
Confidence 4444444 2222 3444444444444444444 23332 44444444444444444
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.66 E-value=8.5e-19 Score=161.75 Aligned_cols=153 Identities=25% Similarity=0.309 Sum_probs=131.3
Q ss_pred CCCCcEEEeecCcccccCCc------cccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCC
Q 008012 4 MQQLQGIGLADNHLQGSIPY------DLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALE 77 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 77 (581)
...++.++++++.+++..|. .|+.+++|++|+|++|.|++ +| .+.++++|++|+|++|+|+ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 46778888888888887776 89999999999999999996 56 8999999999999999998 6788888899
Q ss_pred CCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCc-ccccCcccccceeccccccccccCcc----------cc
Q 008012 78 YILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIP-KTIAGLKDLTNLSLAGNQFQGPIPES----------FG 146 (581)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~l~~N~i~~~~~~~----------~~ 146 (581)
+|++|++++|++++ +| .+..+++|++|++++|.+++..+ ..+..+++|+.|++++|++++..|.. +.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~ 171 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVK 171 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHH
Confidence 99999999999995 44 68899999999999999984332 47889999999999999998765543 77
Q ss_pred CccccceeeccccccCC
Q 008012 147 SLISLESLDLSSNNLSE 163 (581)
Q Consensus 147 ~l~~L~~L~l~~N~l~~ 163 (581)
.+++|+.|+ +|.++.
T Consensus 172 ~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 172 RLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HCSSCSEEC--CGGGTT
T ss_pred hCCCcEEEC--CcccCH
Confidence 899999887 777764
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=3e-16 Score=156.80 Aligned_cols=205 Identities=10% Similarity=0.034 Sum_probs=156.8
Q ss_pred CCCCcEEEeecCcccccCCccccC-CCCCCEEEccCCccc--------------------ccCCccccC--------CCC
Q 008012 4 MQQLQGIGLADNHLQGSIPYDLCQ-LKRLNSLSLQGNKLN--------------------GSIPTCLAS--------LTS 54 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~i~--------------------~~~~~~~~~--------l~~ 54 (581)
+++|+.|.++++ +...--..+.. +++|++|||++|+|. .+.+.+|.+ +++
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~ 102 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQT 102 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTT
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCC
Confidence 456889999875 22222233444 899999999999999 455677888 999
Q ss_pred CCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcC----CCCCcccc---------
Q 008012 55 LRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQL----SGDIPKTI--------- 121 (581)
Q Consensus 55 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l----~~~~~~~~--------- 121 (581)
|+.|+|.+ .++...+.+|.++++|++|++++|.+....+.+|.++.++..+.+..+.. .......|
T Consensus 103 L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~ 181 (329)
T 3sb4_A 103 LEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETT 181 (329)
T ss_dssp CCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEE
T ss_pred CcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccccee
Confidence 99999998 88877788899999999999999999878888999988888888766321 10000001
Q ss_pred -----------------------------------------cCcccccceeccccccccccCccccCccccceeeccccc
Q 008012 122 -----------------------------------------AGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNN 160 (581)
Q Consensus 122 -----------------------------------------~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~ 160 (581)
..+++|+.|+|++|+++.+.+..|.++.+|+.|+|++|
T Consensus 182 i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n- 260 (329)
T 3sb4_A 182 IQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN- 260 (329)
T ss_dssp EEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-
T ss_pred EEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-
Confidence 13789999999999999888888999999999999998
Q ss_pred cCCCCchhhhcccccC-eeEccCCCCCCCCCC-CCCCcCCccccccccccccCC
Q 008012 161 LSEGIPKSLVALSHLK-QFNVSHNRLEGEIPT-EGPFRNFSAQSFHWNYALCGP 212 (581)
Q Consensus 161 l~~~~~~~~~~l~~L~-~l~l~~n~l~~~~~~-~~~~~~~~~~~~~~n~~~c~~ 212 (581)
++.+.+.+|.++++|+ .+++.+ .++...+. +..+..+..+.+.+|....-+
T Consensus 261 i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~ 313 (329)
T 3sb4_A 261 LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLG 313 (329)
T ss_dssp CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEEC
T ss_pred cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccc
Confidence 8788889999999999 999998 66644333 355667777777666444333
No 388
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.60 E-value=3.4e-15 Score=134.13 Aligned_cols=104 Identities=24% Similarity=0.288 Sum_probs=56.7
Q ss_pred cEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccC
Q 008012 8 QGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSN 87 (581)
Q Consensus 8 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n 87 (581)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45555555554 4444443 55555555555555555555555555555555555555444444555555555555555
Q ss_pred cCCCCCCccccCCccCcEEeCCCCcCC
Q 008012 88 YLTGSLTSDIQNMKVLIDLDLSRNQLS 114 (581)
Q Consensus 88 ~l~~~~~~~~~~l~~L~~L~l~~N~l~ 114 (581)
+|++..+..|..+++|++|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 555444444555555555555555554
No 389
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.60 E-value=4.4e-15 Score=133.00 Aligned_cols=104 Identities=23% Similarity=0.276 Sum_probs=52.3
Q ss_pred cEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccC
Q 008012 8 QGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSN 87 (581)
Q Consensus 8 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n 87 (581)
+.|++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 44555555555 3443332 45555555555555444555555555555555555555444444455555555555555
Q ss_pred cCCCCCCccccCCccCcEEeCCCCcCC
Q 008012 88 YLTGSLTSDIQNMKVLIDLDLSRNQLS 114 (581)
Q Consensus 88 ~l~~~~~~~~~~l~~L~~L~l~~N~l~ 114 (581)
+|++..+..|..+++|++|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 555444444445555555555555444
No 390
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=8.3e-15 Score=131.16 Aligned_cols=105 Identities=27% Similarity=0.327 Sum_probs=59.0
Q ss_pred CCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCC
Q 008012 31 LNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSR 110 (581)
Q Consensus 31 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 110 (581)
.+.|++++|.|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456666666666 3444332 5566666666666655555566666666666666666554444555555555555555
Q ss_pred CcCCCCCcccccCcccccceeccccccc
Q 008012 111 NQLSGDIPKTIAGLKDLTNLSLAGNQFQ 138 (581)
Q Consensus 111 N~l~~~~~~~~~~l~~L~~L~l~~N~i~ 138 (581)
|+|++..+..|.++++|+.|+|++|+++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 5555443344555555555555555554
No 391
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.55 E-value=1.6e-14 Score=129.81 Aligned_cols=104 Identities=28% Similarity=0.342 Sum_probs=61.3
Q ss_pred CEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCC
Q 008012 32 NSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRN 111 (581)
Q Consensus 32 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 111 (581)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56666776666 4454443 56666666666666555666666666666666666666544444556666666666666
Q ss_pred cCCCCCcccccCcccccceeccccccc
Q 008012 112 QLSGDIPKTIAGLKDLTNLSLAGNQFQ 138 (581)
Q Consensus 112 ~l~~~~~~~~~~l~~L~~L~l~~N~i~ 138 (581)
+|++..+..|.++++|+.|+|++|++.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 665433334555555555555555554
No 392
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.49 E-value=1.6e-13 Score=140.12 Aligned_cols=192 Identities=11% Similarity=0.084 Sum_probs=131.7
Q ss_pred CCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecc
Q 008012 6 QLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLS 85 (581)
Q Consensus 6 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 85 (581)
+|+.+.|.+ .++.+.+..|.++++|+.++|++|.++.+...+|. .++|+.+.|..| ++.....+|.++++|+.+.+.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 578888875 67767777888888888888888888876666776 578888888744 665667778888888888887
Q ss_pred cCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccc-----cccCccccCccccceeeccccc
Q 008012 86 SNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQ-----GPIPESFGSLISLESLDLSSNN 160 (581)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~-----~~~~~~~~~l~~L~~L~l~~N~ 160 (581)
+| ++.....+|.+ .+|+.+.| .|.++......|.++++|+.+++.+|.+. .+.+..|.++++|+.++|.+ .
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~ 310 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-S 310 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-T
T ss_pred CC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-c
Confidence 65 45455566766 67777777 34455455667777777777777776654 35556677777777777773 4
Q ss_pred cCCCCchhhhcccccCeeEccCCCCCCCCCCC-CCCcCCcccccccc
Q 008012 161 LSEGIPKSLVALSHLKQFNVSHNRLEGEIPTE-GPFRNFSAQSFHWN 206 (581)
Q Consensus 161 l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n 206 (581)
++.+....|.++++|+.+.+..| ++...... ... .+..+.+.+|
T Consensus 311 i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n 355 (401)
T 4fdw_A 311 IRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGT 355 (401)
T ss_dssp CCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCS
T ss_pred eEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCC
Confidence 66666677777777777777544 44222222 233 5566666555
No 393
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.49 E-value=2.5e-16 Score=159.39 Aligned_cols=158 Identities=21% Similarity=0.238 Sum_probs=79.7
Q ss_pred CCCCEEEccCCcccccCCccccC-----CCCCCEEEccCCcccCCCCcc-cccCCCCcEEecccCcCCCCCCccc-----
Q 008012 29 KRLNSLSLQGNKLNGSIPTCLAS-----LTSLRELRLNSNKLTSSIPSA-LWALEYILYVNLSSNYLTGSLTSDI----- 97 (581)
Q Consensus 29 ~~L~~L~l~~n~i~~~~~~~~~~-----l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~----- 97 (581)
++|+.|+|++|.|+......|.. .++|++|+|++|.|++..... ...+++|++|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45556666666655332222222 145666666666554322211 2234456666666666553222222
Q ss_pred cCCccCcEEeCCCCcCCCC----CcccccCcccccceecccccccccc----CccccCccccceeeccccccCCC----C
Q 008012 98 QNMKVLIDLDLSRNQLSGD----IPKTIAGLKDLTNLSLAGNQFQGPI----PESFGSLISLESLDLSSNNLSEG----I 165 (581)
Q Consensus 98 ~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~l~~N~i~~~~----~~~~~~l~~L~~L~l~~N~l~~~----~ 165 (581)
...++|++|+|++|.|+.. ++..+..+++|+.|+|++|.|++.. +..+..+++|+.|+|++|.|++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2345566666666665421 2223345556666666666665422 33444555666666666666542 2
Q ss_pred chhhhcccccCeeEccCCCCC
Q 008012 166 PKSLVALSHLKQFNVSHNRLE 186 (581)
Q Consensus 166 ~~~~~~l~~L~~l~l~~n~l~ 186 (581)
...+...++|+.|+|++|+|+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHhCCCCCEEeccCCCCC
Confidence 223334566666666666655
No 394
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.48 E-value=1.6e-15 Score=164.35 Aligned_cols=184 Identities=15% Similarity=0.094 Sum_probs=94.2
Q ss_pred CCCCCcEEEeecCcccccCC-ccccCCCCCCEEEccCCcccc-cCCccccCCCCCCEEEcc-----------CCcccCC-
Q 008012 3 RMQQLQGIGLADNHLQGSIP-YDLCQLKRLNSLSLQGNKLNG-SIPTCLASLTSLRELRLN-----------SNKLTSS- 68 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~-----------~N~l~~~- 68 (581)
.+++|++|+|++|.+++... ..+..+++|++|+++ |.+.. ..+..+..+++|++|+|+ .|.+++.
T Consensus 291 ~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~ 369 (592)
T 3ogk_B 291 FAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRG 369 (592)
T ss_dssp GGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHH
T ss_pred hcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHH
Confidence 45677888888777654332 334666666666666 33331 222223445555555555 2344321
Q ss_pred CCcccccCCCCcEEecccCcCCCCCCcc----------------------------------ccCCccCcEEeCCCCc--
Q 008012 69 IPSALWALEYILYVNLSSNYLTGSLTSD----------------------------------IQNMKVLIDLDLSRNQ-- 112 (581)
Q Consensus 69 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~----------------------------------~~~l~~L~~L~l~~N~-- 112 (581)
++..+..+++|++|+++.|.+++..+.. +.++++|++|++++|.
T Consensus 370 ~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~ 449 (592)
T 3ogk_B 370 LIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGG 449 (592)
T ss_dssp HHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGG
T ss_pred HHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCC
Confidence 1112233445555555444444333333 3344555555554222
Q ss_pred CCCCCccccc-Ccccccceeccccccccc-cCccccCccccceeeccccccCCC-CchhhhcccccCeeEccCCCCCC
Q 008012 113 LSGDIPKTIA-GLKDLTNLSLAGNQFQGP-IPESFGSLISLESLDLSSNNLSEG-IPKSLVALSHLKQFNVSHNRLEG 187 (581)
Q Consensus 113 l~~~~~~~~~-~l~~L~~L~l~~N~i~~~-~~~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~n~l~~ 187 (581)
+++..+..+. .+++|+.|+|++|++++. .+..+..+++|+.|+|++|.+++. .+..+..+++|+.|++++|+++.
T Consensus 450 l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 450 LTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp CCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred ccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 3322222222 256666666666666542 233445666777777777776543 23334556777777777777654
No 395
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.45 E-value=2.3e-13 Score=136.91 Aligned_cols=104 Identities=26% Similarity=0.261 Sum_probs=77.1
Q ss_pred cEEEeecC-cccccCCccccCCCCCCEEEccC-CcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecc
Q 008012 8 QGIGLADN-HLQGSIPYDLCQLKRLNSLSLQG-NKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLS 85 (581)
Q Consensus 8 ~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~-n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 85 (581)
..++++++ +|+ .+|. +..+++|++|+|++ |.|+++.+..|.+|++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35677777 777 4666 77777788888875 78877766777778888888888888877777777777788888888
Q ss_pred cCcCCCCCCccccCCccCcEEeCCCCcCC
Q 008012 86 SNYLTGSLTSDIQNMKVLIDLDLSRNQLS 114 (581)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 114 (581)
+|+|++..+..|..++ |+.|+|.+|.+.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 8877765555565555 777777777776
No 396
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.44 E-value=1.6e-13 Score=138.19 Aligned_cols=104 Identities=25% Similarity=0.260 Sum_probs=76.5
Q ss_pred CEEEccCC-cccccCCccccCCCCCCEEEccC-CcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCC
Q 008012 32 NSLSLQGN-KLNGSIPTCLASLTSLRELRLNS-NKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLS 109 (581)
Q Consensus 32 ~~L~l~~n-~i~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 109 (581)
..++++++ +|+ .+|. |..+++|++|+|++ |+|++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35678887 787 4566 88888888888875 88876666778888888888888888877777777778888888888
Q ss_pred CCcCCCCCcccccCcccccceeccccccc
Q 008012 110 RNQLSGDIPKTIAGLKDLTNLSLAGNQFQ 138 (581)
Q Consensus 110 ~N~l~~~~~~~~~~l~~L~~L~l~~N~i~ 138 (581)
+|+|++..+..|..++ |+.|+|++|+|.
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 8887754444455444 777777777765
No 397
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.43 E-value=3.2e-14 Score=154.09 Aligned_cols=173 Identities=12% Similarity=0.089 Sum_probs=82.2
Q ss_pred CcEEEeecCc-ccc-cCCccccCCCCCCEEEccCCccccc----CCccccCCCCCCEEEccCCccc----CCCCcccccC
Q 008012 7 LQGIGLADNH-LQG-SIPYDLCQLKRLNSLSLQGNKLNGS----IPTCLASLTSLRELRLNSNKLT----SSIPSALWAL 76 (581)
Q Consensus 7 L~~L~l~~n~-l~~-~~~~~~~~l~~L~~L~l~~n~i~~~----~~~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l 76 (581)
|++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 6666666664 211 1122233566666666666666543 2223445566666666666665 2233344556
Q ss_pred CCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCC---CCCcccccCcccccceeccccccccccCccccCccccce
Q 008012 77 EYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLS---GDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLES 153 (581)
Q Consensus 77 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~---~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~ 153 (581)
++|++|++++|.+.+ ++..+..+++|++|+++++... ...+..+..+++|+.|+++++... .+|..+..+++|++
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~ 297 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRK 297 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCE
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcE
Confidence 666666666666652 4455555555555555532211 122223344444444444443222 23334444444444
Q ss_pred eeccccccCCCCc-hhhhcccccCeeEcc
Q 008012 154 LDLSSNNLSEGIP-KSLVALSHLKQFNVS 181 (581)
Q Consensus 154 L~l~~N~l~~~~~-~~~~~l~~L~~l~l~ 181 (581)
|+|++|.+++... ..+..+++|+.|+++
T Consensus 298 L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 298 LDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp EEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred EecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 4444444332111 123344444444444
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.43 E-value=3.4e-15 Score=151.05 Aligned_cols=169 Identities=22% Similarity=0.191 Sum_probs=125.5
Q ss_pred CCCCcEEEeecCcccccCCccccCC-----CCCCEEEccCCcccccCCccc-cCCCCCCEEEccCCcccCCCCccc----
Q 008012 4 MQQLQGIGLADNHLQGSIPYDLCQL-----KRLNSLSLQGNKLNGSIPTCL-ASLTSLRELRLNSNKLTSSIPSAL---- 73 (581)
Q Consensus 4 ~~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~i~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~---- 73 (581)
+++|++|+|++|.|+......+..+ ++|++|+|++|.|+......+ ..+++|+.|+|++|+|++.....+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3678999999999986544444333 799999999999985433333 346789999999999985444443
Q ss_pred -ccCCCCcEEecccCcCCCC----CCccccCCccCcEEeCCCCcCCCCC----cccccCcccccceecccccccccc---
Q 008012 74 -WALEYILYVNLSSNYLTGS----LTSDIQNMKVLIDLDLSRNQLSGDI----PKTIAGLKDLTNLSLAGNQFQGPI--- 141 (581)
Q Consensus 74 -~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~l~~N~i~~~~--- 141 (581)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++.. +..+...++|+.|+|++|.|++..
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 2468899999999998742 3345577899999999999987432 456677889999999999998643
Q ss_pred -CccccCccccceeeccccccCCCCchhhhcc
Q 008012 142 -PESFGSLISLESLDLSSNNLSEGIPKSLVAL 172 (581)
Q Consensus 142 -~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 172 (581)
+..+...++|++|+|++|.|++.....+..+
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 3345567899999999999986555555443
No 399
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.41 E-value=1.3e-12 Score=133.26 Aligned_cols=172 Identities=15% Similarity=0.136 Sum_probs=110.7
Q ss_pred CCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecc
Q 008012 6 QLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLS 85 (581)
Q Consensus 6 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 85 (581)
+|+.+.|.++ ++.+...+|.++ +|+.++|.. .++.+.+.+|.++++|+.++|++|+++......|. ..+|+.+.+.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 5777777655 655666666663 577777765 56656667777777777777777777644444444 5677777776
Q ss_pred cCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccC---
Q 008012 86 SNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLS--- 162 (581)
Q Consensus 86 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~--- 162 (581)
.| ++.....+|.+|++|+.+++.+| ++......|.+ .+|+.++| .|.++.+....|.++++|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~ 287 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDP 287 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCc
Confidence 44 55455667777777777777664 44344455555 56777777 34455555666777777777777776654
Q ss_pred --CCCchhhhcccccCeeEccCCCCC
Q 008012 163 --EGIPKSLVALSHLKQFNVSHNRLE 186 (581)
Q Consensus 163 --~~~~~~~~~l~~L~~l~l~~n~l~ 186 (581)
.+.+..|.++++|+.+++.+ .++
T Consensus 288 ~~~I~~~aF~~c~~L~~l~l~~-~i~ 312 (401)
T 4fdw_A 288 EAMIHPYCLEGCPKLARFEIPE-SIR 312 (401)
T ss_dssp TCEECTTTTTTCTTCCEECCCT-TCC
T ss_pred ccEECHHHhhCCccCCeEEeCC-ceE
Confidence 34556677777777777763 344
No 400
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.40 E-value=6.3e-13 Score=128.09 Aligned_cols=147 Identities=15% Similarity=0.114 Sum_probs=115.7
Q ss_pred HHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcC-CCccceEeeeeecCCeeeEE
Q 008012 287 ERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILSSCCNTNFKALV 365 (581)
Q Consensus 287 ~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 365 (581)
....++|++...++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++.+.+..|+|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 345567888888898999999999865 6899999987532222245888999999994 67788999999888899999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGH------------------------------------- 408 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------------------------------------- 408 (581)
|||++|.+|.+.+. +......++.+++++++.||...
T Consensus 89 ~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 89 MSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp EECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred EEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 99999999987632 12234478899999999999510
Q ss_pred -------------------CCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 409 -------------------STPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 409 -------------------~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
...++|||++|.||+++++..+.|+||+.+..
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 14589999999999998766677999997753
No 401
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.33 E-value=4.8e-14 Score=152.80 Aligned_cols=204 Identities=17% Similarity=0.153 Sum_probs=139.2
Q ss_pred CCCCCcEEEeecCcccccCC-ccccCCCCCCEEEccCCccccc-CCccccCCCCCCEEEc---------cCCcccCCCCc
Q 008012 3 RMQQLQGIGLADNHLQGSIP-YDLCQLKRLNSLSLQGNKLNGS-IPTCLASLTSLRELRL---------NSNKLTSSIPS 71 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~i~~~-~~~~~~~l~~L~~L~L---------~~N~l~~~~~~ 71 (581)
.+++|++|+|++|.++.... ..+..+++|++|++++| ++.. .+.....+++|++|+| +.|.+++....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~ 365 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLV 365 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHH
Confidence 46889999999999875432 33668899999999998 5522 2223345889999988 34555533222
Q ss_pred cc-ccCCCCcEEecccCcCCCCCCcccc-CCccCcEEeCC--C----CcCCCCC-----cccccCcccccceeccccccc
Q 008012 72 AL-WALEYILYVNLSSNYLTGSLTSDIQ-NMKVLIDLDLS--R----NQLSGDI-----PKTIAGLKDLTNLSLAGNQFQ 138 (581)
Q Consensus 72 ~~-~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~--~----N~l~~~~-----~~~~~~l~~L~~L~l~~N~i~ 138 (581)
.+ .++++|++|.++.|.+++.....+. .+++|++|+++ + |.+++.. +..+.++++|+.|+|++ .++
T Consensus 366 ~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~ 444 (594)
T 2p1m_B 366 SVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLT 444 (594)
T ss_dssp HHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCC
T ss_pred HHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-ccc
Confidence 23 3488899998888888855555554 58889999998 4 5565211 12256778899999977 666
Q ss_pred cccCccccC-ccccceeeccccccCCCCchhh-hcccccCeeEccCCCCCCCCCC--CCCCcCCcccccccccc
Q 008012 139 GPIPESFGS-LISLESLDLSSNNLSEGIPKSL-VALSHLKQFNVSHNRLEGEIPT--EGPFRNFSAQSFHWNYA 208 (581)
Q Consensus 139 ~~~~~~~~~-l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~l~l~~n~l~~~~~~--~~~~~~~~~~~~~~n~~ 208 (581)
+..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|+++..... ...+..++.+.+.+|+.
T Consensus 445 ~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 445 DKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 555555554 7889999999998876544444 6688899999999988532221 13456777777776643
No 402
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.30 E-value=1.7e-13 Score=148.47 Aligned_cols=154 Identities=14% Similarity=0.177 Sum_probs=85.2
Q ss_pred CCCCCcEEEeecCcccc---cCC------------ccccCCCCCCEEEccCCcccccCCcccc-CCCCCCEEEccCC-cc
Q 008012 3 RMQQLQGIGLADNHLQG---SIP------------YDLCQLKRLNSLSLQGNKLNGSIPTCLA-SLTSLRELRLNSN-KL 65 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~~---~~~------------~~~~~l~~L~~L~l~~n~i~~~~~~~~~-~l~~L~~L~L~~N-~l 65 (581)
++++|++|+|++|.... ..| ..+..+++|++|+|++|.+++..+..+. .+++|++|+|++| .+
T Consensus 64 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~ 143 (594)
T 2p1m_B 64 RFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGF 143 (594)
T ss_dssp HCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEE
T ss_pred hCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCC
Confidence 46677777777764211 111 1134566777777777776655555554 5677777777766 44
Q ss_pred cCC-CCcccccCCCCcEEecccCcCCCCCCcccc----CCccCcEEeCCCCc--CCC-CCcccccCcccccceecccc-c
Q 008012 66 TSS-IPSALWALEYILYVNLSSNYLTGSLTSDIQ----NMKVLIDLDLSRNQ--LSG-DIPKTIAGLKDLTNLSLAGN-Q 136 (581)
Q Consensus 66 ~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~----~l~~L~~L~l~~N~--l~~-~~~~~~~~l~~L~~L~l~~N-~ 136 (581)
++. ++..+.++++|++|++++|.+++..+..+. .+++|++|++++|. +.. .++..+.++++|+.|+|++| .
T Consensus 144 ~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~ 223 (594)
T 2p1m_B 144 STDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVP 223 (594)
T ss_dssp EHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSC
T ss_pred CHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCc
Confidence 422 334444677777777777776644433332 45577777777765 210 01111234567777777766 3
Q ss_pred cccccCccccCccccceeecc
Q 008012 137 FQGPIPESFGSLISLESLDLS 157 (581)
Q Consensus 137 i~~~~~~~~~~l~~L~~L~l~ 157 (581)
+++ ++..+..+++|+.|+++
T Consensus 224 ~~~-l~~~~~~~~~L~~L~l~ 243 (594)
T 2p1m_B 224 LEK-LATLLQRAPQLEELGTG 243 (594)
T ss_dssp HHH-HHHHHHHCTTCSEEECS
T ss_pred HHH-HHHHHhcCCcceEcccc
Confidence 333 44445555555555543
No 403
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.27 E-value=5.1e-12 Score=121.51 Aligned_cols=142 Identities=15% Similarity=0.072 Sum_probs=103.6
Q ss_pred HHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCc--cceEeeeeecCCeeeE
Q 008012 287 ERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRN--LIKILSSCCNTNFKAL 364 (581)
Q Consensus 287 ~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--iv~~~~~~~~~~~~~l 364 (581)
.....+|.+....+.|..+.||++...+|+.+++|+..... ...+.+|+++++.+.+.+ +.+++++....+..++
T Consensus 16 ~~~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 16 VERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTTTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred HHhcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 33445555533334566699999987778889999976542 245678999999985434 5568888888888999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------
Q 008012 365 VLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGH------------------------------------ 408 (581)
Q Consensus 365 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------------------------------------ 408 (581)
||||++|.++. ... .+ ...++.++++.|..||...
T Consensus 93 v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp EEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred EEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 99999998884 211 11 2357788888888888421
Q ss_pred -------------------CCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 409 -------------------STPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 409 -------------------~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..+++|+|++|.||++++++.+.|+|||.+..
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998876677999998764
No 404
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.14 E-value=1.1e-11 Score=124.31 Aligned_cols=63 Identities=27% Similarity=0.384 Sum_probs=28.5
Q ss_pred cccccceeccccccccccCccc---cCccccceeeccccccCCC----CchhhhcccccCeeEccCCCCC
Q 008012 124 LKDLTNLSLAGNQFQGPIPESF---GSLISLESLDLSSNNLSEG----IPKSLVALSHLKQFNVSHNRLE 186 (581)
Q Consensus 124 l~~L~~L~l~~N~i~~~~~~~~---~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~l~l~~n~l~ 186 (581)
+++|+.|+|.+|.+++..+..+ ..+++|+.|+|+.|.+++. ++..+..+++|+.|++++|.++
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 4455555555555543222221 1345555555555555432 1222234455555555555443
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.08 E-value=3.2e-10 Score=114.45 Aligned_cols=143 Identities=16% Similarity=0.192 Sum_probs=107.0
Q ss_pred CcCCeecccccccEEEEEeCCCcEEEEEEec--cch-HHHHHHHHHHHHHHHhcC--CCccceEeeeeecC---CeeeEE
Q 008012 294 NECNLLGSGGFGSVYKGILSDGTTVAIKIFN--LQL-EQAFRSFNSECEVLRNVR--HRNLIKILSSCCNT---NFKALV 365 (581)
Q Consensus 294 ~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~~iv~~~~~~~~~---~~~~lv 365 (581)
..++.++.|.++.||++... +..+++|+.. ... ......+.+|+++++.+. +..+.+++.++.+. +..++|
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp CEEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred ceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 34578999999999999876 4678899876 332 122356888999999996 45678889888776 458999
Q ss_pred EeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------
Q 008012 366 LEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGH------------------------------------- 408 (581)
Q Consensus 366 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~------------------------------------- 408 (581)
|||++|..+.+.. -..++......++.+++++|+.||...
T Consensus 120 me~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 120 MEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9999998774311 122467788889999999999999520
Q ss_pred ------------------CCCceecCCCCCCeEecCCCc--EEEeeccCcee
Q 008012 409 ------------------STPVVHCDLKPSNILLDENMV--AHVSDFGISKL 440 (581)
Q Consensus 409 ------------------~~~i~H~dikp~Nill~~~~~--~kl~Dfg~a~~ 440 (581)
...++|||+++.||+++.++. +.++||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 257999999999999997653 68999998875
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.08 E-value=5.1e-11 Score=119.36 Aligned_cols=177 Identities=16% Similarity=0.188 Sum_probs=119.2
Q ss_pred CCCCCcEEEeecCccc---------ccCCccccCCCCCCEEEccCCc-ccccCCccccCCCCCCEEEccCCcccCCCCcc
Q 008012 3 RMQQLQGIGLADNHLQ---------GSIPYDLCQLKRLNSLSLQGNK-LNGSIPTCLASLTSLRELRLNSNKLTSSIPSA 72 (581)
Q Consensus 3 ~~~~L~~L~l~~n~l~---------~~~~~~~~~l~~L~~L~l~~n~-i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 72 (581)
+|++|+.|.+.++... +.+...+..+|+|+.|+|++|. ++ .+. +. +++|+.|+|..|.++......
T Consensus 137 ~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~--l~~-~~-~~~L~~L~L~~~~l~~~~l~~ 212 (362)
T 2ra8_A 137 KFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS--IGK-KP-RPNLKSLEIISGGLPDSVVED 212 (362)
T ss_dssp HHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB--CCS-CB-CTTCSEEEEECSBCCHHHHHH
T ss_pred hcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce--ecc-cc-CCCCcEEEEecCCCChHHHHH
Confidence 4678999998765432 1244556778999999999884 33 233 43 789999999988886443333
Q ss_pred cc--cCCCCcEEeccc--CcCCCC-----CCccc--cCCccCcEEeCCCCcCCCCCccccc---Ccccccceeccccccc
Q 008012 73 LW--ALEYILYVNLSS--NYLTGS-----LTSDI--QNMKVLIDLDLSRNQLSGDIPKTIA---GLKDLTNLSLAGNQFQ 138 (581)
Q Consensus 73 ~~--~l~~L~~L~l~~--n~l~~~-----~~~~~--~~l~~L~~L~l~~N~l~~~~~~~~~---~l~~L~~L~l~~N~i~ 138 (581)
+. .+|+|+.|+|+. |...+. +...+ ..+++|++|+|++|.+.+..+..+. .+++|+.|+|+.|.|+
T Consensus 213 l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~ 292 (362)
T 2ra8_A 213 ILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLT 292 (362)
T ss_dssp HHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCB
T ss_pred HHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCC
Confidence 43 689999999863 222111 11122 2478999999999998744433343 5789999999999998
Q ss_pred ccc----CccccCccccceeeccccccCCCCchhhhcccccCeeEccCCC
Q 008012 139 GPI----PESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNR 184 (581)
Q Consensus 139 ~~~----~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~ 184 (581)
+.. +..+..+++|+.|+|++|.+++..-..+...- ...+++++++
T Consensus 293 d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 293 DEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC-CSEEECCSBC
T ss_pred hHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc-CCEEEecCCc
Confidence 643 33345678999999999988754444444311 3568888877
No 407
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.03 E-value=1e-10 Score=115.11 Aligned_cols=188 Identities=14% Similarity=0.139 Sum_probs=123.1
Q ss_pred CCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhc-CCCc--cceEeeeeecCC---eeeEEEecc
Q 008012 296 CNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNV-RHRN--LIKILSSCCNTN---FKALVLEFM 369 (581)
Q Consensus 296 ~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~~--iv~~~~~~~~~~---~~~lv~e~~ 369 (581)
++.++.|.+..||++. ..+++|+.... .....+.+|+++++.+ .+.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4678999999999863 56899986543 3346788999999988 3332 345555543333 358999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 008012 370 PNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGH----------------------------------------- 408 (581)
Q Consensus 370 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~----------------------------------------- 408 (581)
+|.++.+.... .++.+++..++.+++..++.||...
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99988764332 2466777888888888888888410
Q ss_pred --------------CCCceecCCCCCCeEecC--CCcEEEeeccCceecCCCCCcceeecc---ccC-------ccc--c
Q 008012 409 --------------STPVVHCDLKPSNILLDE--NMVAHVSDFGISKLLGEGDDSVIQTMT---IAT-------IGY--M 460 (581)
Q Consensus 409 --------------~~~i~H~dikp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~---~~~-------~~y--~ 460 (581)
...++|+|++|.||++++ +..+.++||+.+..-.+..+-...... .+. ..| .
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 135799999999999998 566889999998754221110000000 000 001 1
Q ss_pred C-CCCCCCCCCCccccHHHHHHHHHHHHhCCCCCC
Q 008012 461 A-PEFGSEGNVSSKCDVYSYGILLLETFTRKKPTD 494 (581)
Q Consensus 461 a-PE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~ 494 (581)
. |+... ......+.|++|.++|.+.+|..+|.
T Consensus 256 ~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 256 DIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp CHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1 11110 01123689999999999999988753
No 408
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.78 E-value=4.4e-08 Score=96.90 Aligned_cols=136 Identities=18% Similarity=0.205 Sum_probs=101.8
Q ss_pred CCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCC----CccceEeeeeecCCeeeEEEe
Q 008012 292 GFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRH----RNLIKILSSCCNTNFKALVLE 367 (581)
Q Consensus 292 ~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~~iv~~~~~~~~~~~~~lv~e 367 (581)
.+..++.++.|..+.||++ ++.+++|+..... ....+.+|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5666788999999999998 6778999875443 23458899999998865 224455554 56789999
Q ss_pred ccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC--------------------------------------
Q 008012 368 FMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHS-------------------------------------- 409 (581)
Q Consensus 368 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------------- 409 (581)
|++|.++...... .++..+...++.+++..++.||....
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999988743321 13556677788888888888884321
Q ss_pred ----------------------CCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 410 ----------------------TPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 410 ----------------------~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
..++|+|++|.||+++.+..+.++||+.+..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2349999999999999876679999998865
No 409
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.77 E-value=4.7e-08 Score=99.77 Aligned_cols=106 Identities=11% Similarity=0.243 Sum_probs=63.1
Q ss_pred cccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhccccc
Q 008012 96 DIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHL 175 (581)
Q Consensus 96 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 175 (581)
+|.++..|+.+.+.++..+ .....|.++++|+.+.+. +.++.+....|.++.+|+.++|..+ ++.+...+|.++.+|
T Consensus 260 aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred eeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCC
Confidence 5666777888887665543 445566677777777775 3455455566777777777777654 444556667777777
Q ss_pred CeeEccCCCCCCCCCCC--CCCcCCcccccccc
Q 008012 176 KQFNVSHNRLEGEIPTE--GPFRNFSAQSFHWN 206 (581)
Q Consensus 176 ~~l~l~~n~l~~~~~~~--~~~~~~~~~~~~~n 206 (581)
+.+.+..+ ++ .+... .....|..+.+.++
T Consensus 337 ~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 337 ERIAIPSS-VT-KIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp CEEEECTT-CC-BCCGGGGTTCTTCCEEEESSC
T ss_pred CEEEECcc-cC-EEhHhHhhCCCCCCEEEECCc
Confidence 77776443 43 22221 33344555555443
No 410
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.77 E-value=2.1e-08 Score=102.32 Aligned_cols=175 Identities=21% Similarity=0.151 Sum_probs=119.7
Q ss_pred CCCCCCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcc---------------
Q 008012 1 MGRMQQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKL--------------- 65 (581)
Q Consensus 1 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l--------------- 65 (581)
|.++++|+.+.+.++-. .+....|.++.+|+.+++..| ++.+...+|.++..|+.+.+..+..
T Consensus 158 F~~c~~L~~i~l~~~~~-~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i 235 (394)
T 4fs7_A 158 FATCESLEYVSLPDSME-TLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNI 235 (394)
T ss_dssp TTTCTTCCEEECCTTCC-EECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEE
T ss_pred hcccCCCcEEecCCccc-eeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceE
Confidence 45678899999986644 477788999999999999876 5556667777777777666554321
Q ss_pred ------cCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceecccccccc
Q 008012 66 ------TSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQG 139 (581)
Q Consensus 66 ------~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~ 139 (581)
+......|..+..|+.+.+..+... .....|..+..|+.+.+..+.+. ...|.++.+|+.+.+.++ ++.
T Consensus 236 ~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~ 310 (394)
T 4fs7_A 236 IIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKF 310 (394)
T ss_dssp EECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCE
T ss_pred EECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccccccccccccccc-cce
Confidence 1123456778888999998887654 55667777777777777665543 235666777777777654 554
Q ss_pred ccCccccCccccceeeccccccCCCCchhhhcccccCeeEccCC
Q 008012 140 PIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSHN 183 (581)
Q Consensus 140 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n 183 (581)
+....|.++.+|+.++|.++ ++.+...+|.++++|+.+.+..|
T Consensus 311 I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 311 IGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp ECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred echhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 55566777777777777644 55556666777777777777655
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.74 E-value=1.1e-09 Score=99.01 Aligned_cols=92 Identities=17% Similarity=0.252 Sum_probs=46.6
Q ss_pred ccccCCCCCCEEEccCC-ccccc----CCccccCCCCCCEEEccCCcccCC----CCcccccCCCCcEEecccCcCCCC-
Q 008012 23 YDLCQLKRLNSLSLQGN-KLNGS----IPTCLASLTSLRELRLNSNKLTSS----IPSALWALEYILYVNLSSNYLTGS- 92 (581)
Q Consensus 23 ~~~~~l~~L~~L~l~~n-~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~- 92 (581)
..+...+.|++|+|++| .|+.. +...+...++|++|+|++|+|.+. +...+...+.|++|+|++|.|...
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34455566666666666 65522 233444555666666666666532 222333445555555555555521
Q ss_pred ---CCccccCCccCcEEeC--CCCcCC
Q 008012 93 ---LTSDIQNMKVLIDLDL--SRNQLS 114 (581)
Q Consensus 93 ---~~~~~~~l~~L~~L~l--~~N~l~ 114 (581)
+..++...+.|++|+| ++|.|.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2233444455555555 445554
No 412
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.74 E-value=5.1e-08 Score=99.47 Aligned_cols=159 Identities=12% Similarity=0.045 Sum_probs=106.5
Q ss_pred cCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCc-----------
Q 008012 20 SIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNY----------- 88 (581)
Q Consensus 20 ~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~----------- 88 (581)
+....|.++.+|+.+.+.++-.+ +...+|.++++|+.+.+..| ++......|.++..|+.+.+..+.
T Consensus 153 i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~ 230 (394)
T 4fs7_A 153 IGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKT 230 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTC
T ss_pred cchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccC
Confidence 45567888888888888765433 66778888888888888766 444455566666666665554432
Q ss_pred ----------CCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccc
Q 008012 89 ----------LTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSS 158 (581)
Q Consensus 89 ----------l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~ 158 (581)
++.....+|..+..|+.+.+..+... .....|.++..|+.+.+..+.+. ...|..+.+|+.+.+.+
T Consensus 231 ~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~ 306 (394)
T 4fs7_A 231 GVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLD 306 (394)
T ss_dssp CCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECT
T ss_pred CCceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---ccccccccccccccccc
Confidence 11122345667788888888777554 55567777888887777665433 34677788888888866
Q ss_pred cccCCCCchhhhcccccCeeEccCCCCC
Q 008012 159 NNLSEGIPKSLVALSHLKQFNVSHNRLE 186 (581)
Q Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~~n~l~ 186 (581)
+ ++.+...+|.++.+|+.+++..+ ++
T Consensus 307 ~-i~~I~~~aF~~c~~L~~i~lp~~-v~ 332 (394)
T 4fs7_A 307 S-VKFIGEEAFESCTSLVSIDLPYL-VE 332 (394)
T ss_dssp T-CCEECTTTTTTCTTCCEECCCTT-CC
T ss_pred c-cceechhhhcCCCCCCEEEeCCc-cc
Confidence 5 55566677888888888887544 44
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.73 E-value=1.4e-09 Score=98.24 Aligned_cols=113 Identities=16% Similarity=0.224 Sum_probs=89.2
Q ss_pred CCCCCCcEEEeecC-ccccc----CCccccCCCCCCEEEccCCccccc----CCccccCCCCCCEEEccCCcccCC----
Q 008012 2 GRMQQLQGIGLADN-HLQGS----IPYDLCQLKRLNSLSLQGNKLNGS----IPTCLASLTSLRELRLNSNKLTSS---- 68 (581)
Q Consensus 2 ~~~~~L~~L~l~~n-~l~~~----~~~~~~~l~~L~~L~l~~n~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~---- 68 (581)
...+.|++|+|++| .|+.. +...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|++.
T Consensus 33 ~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~ 112 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 112 (185)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHH
Confidence 45688999999999 88743 345677789999999999999843 345566678999999999999853
Q ss_pred CCcccccCCCCcEEec--ccCcCCCCC----CccccCCccCcEEeCCCCcCC
Q 008012 69 IPSALWALEYILYVNL--SSNYLTGSL----TSDIQNMKVLIDLDLSRNQLS 114 (581)
Q Consensus 69 ~~~~~~~l~~L~~L~l--~~n~l~~~~----~~~~~~l~~L~~L~l~~N~l~ 114 (581)
+...+...+.|++|+| ++|.|.... ...+...+.|++|+|++|.+.
T Consensus 113 l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 113 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4566778889999999 889998432 334556688888888888875
No 414
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.68 E-value=2.2e-07 Score=89.43 Aligned_cols=136 Identities=18% Similarity=0.125 Sum_probs=102.3
Q ss_pred Ceecccccc-cEEEEEeC-CCcEEEEEEeccchHHHHHHHHHHHHHHHhcC-CCccceEeeeeecCCeeeEEEeccCCCC
Q 008012 297 NLLGSGGFG-SVYKGILS-DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILSSCCNTNFKALVLEFMPNGS 373 (581)
Q Consensus 297 ~~lg~G~~~-~v~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 373 (581)
+.+..|..+ .||+.... ++..+++|+-.... ...+.+|...++.+. +--+.++++++.+.+..++|||+++|.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~---~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGSV---ANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETHH---HHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCCC---HhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345566665 58988754 56789999866543 346778999999883 3346788899988899999999999998
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------------------
Q 008012 374 LDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG---------------------------------------------- 407 (581)
Q Consensus 374 L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~---------------------------------------------- 407 (581)
+.+..... ......+..+++..|..||..
T Consensus 107 ~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 107 AFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred ccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 88766542 123446778888888888831
Q ss_pred ---------CCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 408 ---------HSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 408 ---------~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
....++|+|+.+.||++++++.+-|+||+.+..
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012379999999999999887778999998764
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.66 E-value=1.9e-09 Score=102.32 Aligned_cols=79 Identities=25% Similarity=0.405 Sum_probs=40.4
Q ss_pred CCccCcEEeCCCCcCCC--CCcccccCcccccceeccccccccccCccccCcc--ccceeeccccccCCCCc-------h
Q 008012 99 NMKVLIDLDLSRNQLSG--DIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLI--SLESLDLSSNNLSEGIP-------K 167 (581)
Q Consensus 99 ~l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~--~L~~L~l~~N~l~~~~~-------~ 167 (581)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++..| .
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 34555555555555554 2223444555555555555555543 1222222 56666666666654333 2
Q ss_pred hhhcccccCeeE
Q 008012 168 SLVALSHLKQFN 179 (581)
Q Consensus 168 ~~~~l~~L~~l~ 179 (581)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 245566666654
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.65 E-value=2.5e-09 Score=101.57 Aligned_cols=105 Identities=26% Similarity=0.277 Sum_probs=69.1
Q ss_pred ccCCCCCCE--EEccCCccc---CCCCcccccCCCCcEEecccCcCCC--CCCccccCCccCcEEeCCCCcCCCCCcccc
Q 008012 49 LASLTSLRE--LRLNSNKLT---SSIPSALWALEYILYVNLSSNYLTG--SLTSDIQNMKVLIDLDLSRNQLSGDIPKTI 121 (581)
Q Consensus 49 ~~~l~~L~~--L~L~~N~l~---~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 121 (581)
|...+.|.. ++++.|+.. ...+-...++++|++|+|++|+|++ .++..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444455555 566677443 1122223567788888888888886 3345566788888888888888753 334
Q ss_pred cCcc--cccceeccccccccccC-------ccccCccccceee
Q 008012 122 AGLK--DLTNLSLAGNQFQGPIP-------ESFGSLISLESLD 155 (581)
Q Consensus 122 ~~l~--~L~~L~l~~N~i~~~~~-------~~~~~l~~L~~L~ 155 (581)
..+. +|+.|+|++|++.+..| ..+..+|+|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 78888888888876554 2356778888776
No 417
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.62 E-value=1.5e-07 Score=95.93 Aligned_cols=111 Identities=16% Similarity=0.246 Sum_probs=93.0
Q ss_pred cccccCCCCcEEecccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccc
Q 008012 71 SALWALEYILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLIS 150 (581)
Q Consensus 71 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~ 150 (581)
.+|.++.+|+.+.+.++..+ ....+|.+++.|+.+.+. +.++......|.++.+|+.++|..+ ++.+....|.++.+
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred ceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 46778899999999877655 667889999999999996 4566466678999999999999865 66567788999999
Q ss_pred cceeeccccccCCCCchhhhcccccCeeEccCCCC
Q 008012 151 LESLDLSSNNLSEGIPKSLVALSHLKQFNVSHNRL 185 (581)
Q Consensus 151 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~n~l 185 (581)
|+.+.|..+ ++.+...+|.++++|+.+++.+|..
T Consensus 336 L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 336 LERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred CCEEEECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 999999765 7777888999999999999998854
No 418
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.58 E-value=4.1e-07 Score=89.19 Aligned_cols=136 Identities=14% Similarity=0.078 Sum_probs=95.8
Q ss_pred CCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCC---ccceEeeeee-cCCeeeEEEeccCC
Q 008012 296 CNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHR---NLIKILSSCC-NTNFKALVLEFMPN 371 (581)
Q Consensus 296 ~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~-~~~~~~lv~e~~~~ 371 (581)
++.++.|....||+. +..+++|+... ......+.+|+++++.+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 456888888899988 57788998543 23446788999999999642 3556666664 45567899999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 008012 372 GSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHG-------------------------------------------- 407 (581)
Q Consensus 372 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~-------------------------------------------- 407 (581)
.++.+..... ++......++.++++.|+.||..
T Consensus 98 ~~l~~~~~~~---l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMAV---LPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHTT---SCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhhh---CCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 8887632211 24445555666666666666632
Q ss_pred -------------CCCCceecCCCCCCeEecC---CCc-EEEeeccCcee
Q 008012 408 -------------HSTPVVHCDLKPSNILLDE---NMV-AHVSDFGISKL 440 (581)
Q Consensus 408 -------------~~~~i~H~dikp~Nill~~---~~~-~kl~Dfg~a~~ 440 (581)
....++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1335699999999999987 455 58999998764
No 419
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.52 E-value=6e-07 Score=90.96 Aligned_cols=153 Identities=14% Similarity=0.139 Sum_probs=94.2
Q ss_pred ccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEecccCcCCCCCCccccCCccCc
Q 008012 25 LCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYLTGSLTSDIQNMKVLI 104 (581)
Q Consensus 25 ~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 104 (581)
+.....+..+.+..+.-. ....+|....+|+.+.+..+ ++......|.++..|+.+.+..+ ++.....+|.++..|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 190 YPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp CCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred ccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 444555555555543333 45566666777777776544 33345556667777777777655 4434555667777777
Q ss_pred EEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCCCchhhhcccccCeeEccC
Q 008012 105 DLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEGIPKSLVALSHLKQFNVSH 182 (581)
Q Consensus 105 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~ 182 (581)
.+.+..+ ++......|.++++|+.+.+.++.++.+....|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..
T Consensus 267 ~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 267 TLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp EEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred ccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 7777544 44344455667777777777777666555666777777777777654 5555566677777777766643
No 420
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.50 E-value=6.3e-07 Score=90.81 Aligned_cols=162 Identities=10% Similarity=0.081 Sum_probs=118.6
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEec
Q 008012 5 QQLQGIGLADNHLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNL 84 (581)
Q Consensus 5 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 84 (581)
..+..+.+....- ......+..+.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ ++.....+|.++.+|+.+.+
T Consensus 194 ~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l 270 (379)
T 4h09_A 194 KTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNF 270 (379)
T ss_dssp CCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccc
Confidence 3445555544333 255667777888888888765 45467788888888998888766 65566778888888888888
Q ss_pred ccCcCCCCCCccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccccccccCccccCccccceeeccccccCCC
Q 008012 85 SSNYLTGSLTSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQFQGPIPESFGSLISLESLDLSSNNLSEG 164 (581)
Q Consensus 85 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~ 164 (581)
..+ +......+|.+|++|+.+.+.++.++......|.++.+|+.++|..+ ++.+....|.++.+|+.+.+..+ ++.+
T Consensus 271 ~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I 347 (379)
T 4h09_A 271 YAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLI 347 (379)
T ss_dssp CCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEE
T ss_pred ccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEE
Confidence 654 55455668888889999998888887566677888888988888755 66566678888888988888765 5555
Q ss_pred Cchhhhcc
Q 008012 165 IPKSLVAL 172 (581)
Q Consensus 165 ~~~~~~~l 172 (581)
...+|.+.
T Consensus 348 ~~~aF~~c 355 (379)
T 4h09_A 348 ESGAFEGS 355 (379)
T ss_dssp CTTTTTTS
T ss_pred chhHhhCC
Confidence 56666554
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.47 E-value=7.5e-07 Score=89.40 Aligned_cols=77 Identities=10% Similarity=0.091 Sum_probs=58.0
Q ss_pred CCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCc--cceEeeeeecC-CeeeEEEecc
Q 008012 293 FNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRN--LIKILSSCCNT-NFKALVLEFM 369 (581)
Q Consensus 293 y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--iv~~~~~~~~~-~~~~lv~e~~ 369 (581)
...++.++.|....+|+... +++.+++|+..... .+.+|+.+++.+.... +.++++++.+. +..++||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~~-----~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCAD-----GFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCCH-----HHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCchh-----hHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 34457789999999999886 47889999876542 4778999999885433 55677776654 5689999999
Q ss_pred CCCCHH
Q 008012 370 PNGSLD 375 (581)
Q Consensus 370 ~~~~L~ 375 (581)
+|.++.
T Consensus 117 ~G~~l~ 122 (362)
T 3ovc_A 117 QGVTLQ 122 (362)
T ss_dssp CSEETT
T ss_pred CCCCcc
Confidence 986653
No 422
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.47 E-value=4.8e-07 Score=87.63 Aligned_cols=76 Identities=16% Similarity=0.114 Sum_probs=59.6
Q ss_pred cCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCC---ccceEeeeeecCCeeeEEEeccCC
Q 008012 295 ECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHR---NLIKILSSCCNTNFKALVLEFMPN 371 (581)
Q Consensus 295 ~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---~iv~~~~~~~~~~~~~lv~e~~~~ 371 (581)
..+.|+.|.++.||++...+|+.+++|+...........+.+|++.++.+.+. .+.+++++. ..++||||++|
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 45789999999999999888999999996543221224678999999999764 577777763 36899999999
Q ss_pred CCH
Q 008012 372 GSL 374 (581)
Q Consensus 372 ~~L 374 (581)
+++
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 875
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.32 E-value=5.8e-07 Score=90.29 Aligned_cols=80 Identities=6% Similarity=-0.033 Sum_probs=55.5
Q ss_pred CCee-cccccccEEEEEeC-------CCcEEEEEEeccchH---HHHHHHHHHHHHHHhcC-C--CccceEeeeeecC--
Q 008012 296 CNLL-GSGGFGSVYKGILS-------DGTTVAIKIFNLQLE---QAFRSFNSECEVLRNVR-H--RNLIKILSSCCNT-- 359 (581)
Q Consensus 296 ~~~l-g~G~~~~v~~~~~~-------~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h--~~iv~~~~~~~~~-- 359 (581)
.+.| +.|....+|+.... +++.+++|+...... .....+.+|+.+++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88888999998754 267899998754320 01135677888888883 2 3567788877655
Q ss_pred -CeeeEEEeccCCCCHH
Q 008012 360 -NFKALVLEFMPNGSLD 375 (581)
Q Consensus 360 -~~~~lv~e~~~~~~L~ 375 (581)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.11 E-value=2.2e-05 Score=78.03 Aligned_cols=138 Identities=18% Similarity=0.173 Sum_probs=79.0
Q ss_pred CeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcC--CCccceEee------eeecCCeeeEEEec
Q 008012 297 NLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR--HRNLIKILS------SCCNTNFKALVLEF 368 (581)
Q Consensus 297 ~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~~iv~~~~------~~~~~~~~~lv~e~ 368 (581)
+.|+.|..+.||++...+| .+++|+..... ..+..|..+++.+. .-.+.+++. +....+..+++|+|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~----~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE----KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH----HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH----HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 4566677899999987644 58999987632 22334555555542 112333332 12345678999999
Q ss_pred cCCCCHH-----------H---HHhh--CCC--C---------CCHHHH-------------------------------
Q 008012 369 MPNGSLD-----------K---WLYS--HNY--F---------QDIPDR------------------------------- 390 (581)
Q Consensus 369 ~~~~~L~-----------~---~l~~--~~~--~---------~~~~~~------------------------------- 390 (581)
++|.++. . .++. ... . ..|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 1 1111 100 0 112110
Q ss_pred HHHHHHHHHHHHHHhc----------CCCCCceecCCCCCCeEecCCCcEEEeeccCce
Q 008012 391 LNIMIDVALALEYLHH----------GHSTPVVHCDLKPSNILLDENMVAHVSDFGISK 439 (581)
Q Consensus 391 ~~i~~~i~~~L~~LH~----------~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~ 439 (581)
..+..++..++++|+. .....++|||+++.||+++.++.+.++||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345666652 025789999999999999888899999999775
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.10 E-value=8.2e-06 Score=83.08 Aligned_cols=75 Identities=17% Similarity=0.220 Sum_probs=49.6
Q ss_pred CCeecccccccEEEEEeC-CCcEEEEEEeccchH-------HHHHHHHHHHHHHHhcC-C-Cc-cceEeeeeecCCeeeE
Q 008012 296 CNLLGSGGFGSVYKGILS-DGTTVAIKIFNLQLE-------QAFRSFNSECEVLRNVR-H-RN-LIKILSSCCNTNFKAL 364 (581)
Q Consensus 296 ~~~lg~G~~~~v~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~-h-~~-iv~~~~~~~~~~~~~l 364 (581)
.+.+|.|..+.||++... +++.+++|....... ....++..|.++++.+. + |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999754 578899998654321 01235677999988873 2 33 4455544 3445689
Q ss_pred EEeccCCC
Q 008012 365 VLEFMPNG 372 (581)
Q Consensus 365 v~e~~~~~ 372 (581)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999774
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.10 E-value=6.5e-07 Score=78.71 Aligned_cols=83 Identities=10% Similarity=0.128 Sum_probs=39.8
Q ss_pred CCcEEecccCcCCCCCCccccCCccCcEEeCCCCc-CCCCCcccccCc----ccccceecccc-ccccccCccccCcccc
Q 008012 78 YILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQ-LSGDIPKTIAGL----KDLTNLSLAGN-QFQGPIPESFGSLISL 151 (581)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~l----~~L~~L~l~~N-~i~~~~~~~~~~l~~L 151 (581)
+|+.|+++++.|+...-..+..|++|++|+|++|. |++..-..++.+ ++|+.|+|++| +|++..-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 35555555555443333344455555555555553 443222333332 24555555555 2544333444555556
Q ss_pred ceeeccccc
Q 008012 152 ESLDLSSNN 160 (581)
Q Consensus 152 ~~L~l~~N~ 160 (581)
+.|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666655553
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.08 E-value=8.5e-07 Score=77.96 Aligned_cols=93 Identities=13% Similarity=0.128 Sum_probs=74.6
Q ss_pred CccccCCccCcEEeCCCCcCCCCCcccccCcccccceeccccc-cccccCccccCc----cccceeeccccc-cCCCCch
Q 008012 94 TSDIQNMKVLIDLDLSRNQLSGDIPKTIAGLKDLTNLSLAGNQ-FQGPIPESFGSL----ISLESLDLSSNN-LSEGIPK 167 (581)
Q Consensus 94 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~-i~~~~~~~~~~l----~~L~~L~l~~N~-l~~~~~~ 167 (581)
|.....-..|++||++++.|+...-..+.++++|+.|+|++|. |++..-..++.+ ++|++|+|++|. +++..-.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 3333334679999999999987767778899999999999994 876555667664 479999999985 8876566
Q ss_pred hhhcccccCeeEccCCC-CC
Q 008012 168 SLVALSHLKQFNVSHNR-LE 186 (581)
Q Consensus 168 ~~~~l~~L~~l~l~~n~-l~ 186 (581)
.+..+++|+.|+++++. ++
T Consensus 134 ~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp HGGGCTTCCEEEEESCTTCC
T ss_pred HHhcCCCCCEEECCCCCCCC
Confidence 78889999999999985 44
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.90 E-value=0.00011 Score=71.62 Aligned_cols=137 Identities=15% Similarity=0.078 Sum_probs=92.0
Q ss_pred cCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcC---CCccceEeeeeecCCeeeEEEeccCC
Q 008012 295 ECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR---HRNLIKILSSCCNTNFKALVLEFMPN 371 (581)
Q Consensus 295 ~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~~~~~~~~~lv~e~~~~ 371 (581)
..+.|+.|....+|+.... +..+++|+..... ...+..|++.++.+. ...+.+++++....+..++||||++|
T Consensus 40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~~---~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERSY---RSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEESS-SCEEEEEEEEGGG---HHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEEC-CCeEEEEeCCccc---HHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 3467899999999999864 6788999876543 356788999998883 36788889888888889999999998
Q ss_pred CCHH--------H---HHhhCCC---------------------CCCHHHHH---HHH----------------HHHHHH
Q 008012 372 GSLD--------K---WLYSHNY---------------------FQDIPDRL---NIM----------------IDVALA 400 (581)
Q Consensus 372 ~~L~--------~---~l~~~~~---------------------~~~~~~~~---~i~----------------~~i~~~ 400 (581)
..+. + .++.... .-+|.... ++. ..++..
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 7642 1 1222111 01333221 011 112222
Q ss_pred H-HHHhc-CCCCCceecCCCCCCeEecCCCcEEEeecc
Q 008012 401 L-EYLHH-GHSTPVVHCDLKPSNILLDENMVAHVSDFG 436 (581)
Q Consensus 401 L-~~LH~-~~~~~i~H~dikp~Nill~~~~~~kl~Dfg 436 (581)
+ ..|.. .....++|+|+.+.|++++.++ +.++|++
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2 23321 2246799999999999999887 8899974
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.81 E-value=7.9e-05 Score=76.34 Aligned_cols=80 Identities=14% Similarity=0.112 Sum_probs=49.2
Q ss_pred CCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCC---CCCccccHHHHHHHHHH
Q 008012 409 STPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEG---NVSSKCDVYSYGILLLE 485 (581)
Q Consensus 409 ~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~vl~e 485 (581)
...++|||++|.||+++.++ ++++||+.+..-.+..+-... ...-...|++|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAY-LGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHH-HHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHH-HHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 67899999999999998776 999999988753211110000 00001345666543311 11224566688888888
Q ss_pred HHhCC
Q 008012 486 TFTRK 490 (581)
Q Consensus 486 l~tg~ 490 (581)
.+++.
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87753
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.75 E-value=6.7e-05 Score=72.57 Aligned_cols=79 Identities=15% Similarity=0.105 Sum_probs=57.0
Q ss_pred CCCcCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCC---CccceEeeeeecCCeeeEEEec
Q 008012 292 GFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRH---RNLIKILSSCCNTNFKALVLEF 368 (581)
Q Consensus 292 ~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~~iv~~~~~~~~~~~~~lv~e~ 368 (581)
+...++.+|.|..+.||+++..+|+.|++|+...........+..|++.|+.+.. --+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 3445678999999999999999999999998765432223457789999998842 2345555542 24789999
Q ss_pred cCCCCH
Q 008012 369 MPNGSL 374 (581)
Q Consensus 369 ~~~~~L 374 (581)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987643
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.66 E-value=0.00019 Score=70.89 Aligned_cols=139 Identities=12% Similarity=0.052 Sum_probs=74.3
Q ss_pred Ceeccccccc-EEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcC-C-CccceEeeeeecCCeeeEEEeccCCCC
Q 008012 297 NLLGSGGFGS-VYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-H-RNLIKILSSCCNTNFKALVLEFMPNGS 373 (581)
Q Consensus 297 ~~lg~G~~~~-v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~~iv~~~~~~~~~~~~~lv~e~~~~~~ 373 (581)
+.|+.|+... +|+....+++.+++|....... ..+..|+.+++.+. + -.+.+++.+....+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 4566665554 6777654467788886544321 23445677776663 2 23556666543333 78999998777
Q ss_pred HHHHHhhCC-------------------------CCCCHHHHH-------HHH-------------HHHHHHHHHHh---
Q 008012 374 LDKWLYSHN-------------------------YFQDIPDRL-------NIM-------------IDVALALEYLH--- 405 (581)
Q Consensus 374 L~~~l~~~~-------------------------~~~~~~~~~-------~i~-------------~~i~~~L~~LH--- 405 (581)
+.+++.... ...+..... .+. ..+...++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 655443210 001111100 000 01111222221
Q ss_pred cCCCCCceecCCCCCCeEecCC----CcEEEeeccCcee
Q 008012 406 HGHSTPVVHCDLKPSNILLDEN----MVAHVSDFGISKL 440 (581)
Q Consensus 406 ~~~~~~i~H~dikp~Nill~~~----~~~kl~Dfg~a~~ 440 (581)
......++|||+.+.||+++.+ +.+.++||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1125679999999999999874 6899999998875
No 432
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.66 E-value=0.00023 Score=63.99 Aligned_cols=103 Identities=12% Similarity=0.026 Sum_probs=70.1
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCceecCCCCCcceee
Q 008012 372 GSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISKLLGEGDDSVIQT 451 (581)
Q Consensus 372 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 451 (581)
-+|.+.+...+.+++++++|.++.|.+.+|.-+-. .+.-..+=+.|..|++..+|.|.+.+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc------------
Confidence 38999999999999999999999999999887721 11111333457899999999887763 1110
Q ss_pred ccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCC
Q 008012 452 MTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKP 492 (581)
Q Consensus 452 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~P 492 (581)
.....+.|||... ...+.+.=|||||+++|..+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1233566888763 3556788999999999999875554
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.62 E-value=0.00013 Score=71.15 Aligned_cols=129 Identities=16% Similarity=0.159 Sum_probs=76.6
Q ss_pred cCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCcc-ceEeeeeecCCeeeEEEecc-CCC
Q 008012 295 ECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNL-IKILSSCCNTNFKALVLEFM-PNG 372 (581)
Q Consensus 295 ~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~-~~~ 372 (581)
-++.|+.|....+|++ +.+++|+....... .....+|+.+++.+....+ .+++++. .+.-++++||+ +|.
T Consensus 22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQ 93 (301)
T ss_dssp SCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCE
T ss_pred ceeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCc
Confidence 3688999999999998 56889987654211 1123468887777732222 4555543 33457899999 665
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc----------------------------------------------
Q 008012 373 SLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHH---------------------------------------------- 406 (581)
Q Consensus 373 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~---------------------------------------------- 406 (581)
++....... ...+..++++.|+.||.
T Consensus 94 ~l~~~~~~~--------~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 165 (301)
T 3dxq_A 94 TMSPEKFKT--------RPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSA 165 (301)
T ss_dssp ECCHHHHHH--------STTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHH
T ss_pred cCCHhhHhh--------hHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHH
Confidence 543210000 00012222222222221
Q ss_pred ----CCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 407 ----GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 407 ----~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
.....++|+|+.+.||+ ..++.+.++||..+..
T Consensus 166 l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 166 LAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp HHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 11345899999999999 5667889999998864
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.61 E-value=8.5e-05 Score=62.14 Aligned_cols=36 Identities=33% Similarity=0.296 Sum_probs=18.4
Q ss_pred CCCEEEccCCcccCCCCcccccCCCCcEEecccCcC
Q 008012 54 SLRELRLNSNKLTSSIPSALWALEYILYVNLSSNYL 89 (581)
Q Consensus 54 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~l 89 (581)
+|+.|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 355555555555544444455555555555555544
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.60 E-value=1.5e-05 Score=71.43 Aligned_cols=64 Identities=13% Similarity=0.239 Sum_probs=29.1
Q ss_pred CCCCCCEEEccCC-ccccc----CCccccCCCCCCEEEccCCcccCC----CCcccccCCCCcEEecccCcCC
Q 008012 27 QLKRLNSLSLQGN-KLNGS----IPTCLASLTSLRELRLNSNKLTSS----IPSALWALEYILYVNLSSNYLT 90 (581)
Q Consensus 27 ~l~~L~~L~l~~n-~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~n~l~ 90 (581)
+-+.|+.|+|++| .|... +.+++..-+.|+.|+|++|+|.+. +...+..-+.|++|+|++|.|.
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3455555555553 44421 223344444555555555555422 1222223344555555555554
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.56 E-value=2.3e-05 Score=70.17 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=52.1
Q ss_pred CCCCcEEecccC-cCCC----CCCccccCCccCcEEeCCCCcCCCCC----cccccCcccccceecccccccccc----C
Q 008012 76 LEYILYVNLSSN-YLTG----SLTSDIQNMKVLIDLDLSRNQLSGDI----PKTIAGLKDLTNLSLAGNQFQGPI----P 142 (581)
Q Consensus 76 l~~L~~L~l~~n-~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~L~l~~N~i~~~~----~ 142 (581)
-+.|++|+|++| +|.. .+.+++..-+.|+.|+|++|.|.+.. .+.+..-+.|+.|+|+.|.|+... .
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 344555555543 4431 12233344455666666666554221 222333455666666666665322 2
Q ss_pred ccccCccccceeecccccc---CCC----CchhhhcccccCeeEccCCC
Q 008012 143 ESFGSLISLESLDLSSNNL---SEG----IPKSLVALSHLKQFNVSHNR 184 (581)
Q Consensus 143 ~~~~~l~~L~~L~l~~N~l---~~~----~~~~~~~l~~L~~l~l~~n~ 184 (581)
+.+..-+.|++|+|++|.. ... +...+..-+.|..|+++.|.
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 3344455677777765432 211 22334455666667665543
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.54 E-value=0.00012 Score=73.34 Aligned_cols=140 Identities=14% Similarity=0.148 Sum_probs=82.7
Q ss_pred CCeecccccccEEEEEeC--------CCcEEEEEEeccchHHHHHHHHHHHHHHHhcC-CCccceEeeeeecCCeeeEEE
Q 008012 296 CNLLGSGGFGSVYKGILS--------DGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 296 ~~~lg~G~~~~v~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 366 (581)
++.+..|-...+|++... +++.+++|+..... .......+|.++++.+. +.-..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 467888889999999864 25789999864321 12345568999998883 3333566666543 2999
Q ss_pred eccCCCCHHH--------------HHh---hC----CCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 008012 367 EFMPNGSLDK--------------WLY---SH----NYFQD--IPDRLNIMIDVAL-------------------ALEYL 404 (581)
Q Consensus 367 e~~~~~~L~~--------------~l~---~~----~~~~~--~~~~~~i~~~i~~-------------------~L~~L 404 (581)
||++|.++.. .+. .. +.... +.++.++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9999865431 111 11 11112 3444445444322 12222
Q ss_pred h----c-CCCCCceecCCCCCCeEecCC----CcEEEeeccCcee
Q 008012 405 H----H-GHSTPVVHCDLKPSNILLDEN----MVAHVSDFGISKL 440 (581)
Q Consensus 405 H----~-~~~~~i~H~dikp~Nill~~~----~~~kl~Dfg~a~~ 440 (581)
. . .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 1 123568999999999999876 7899999998864
No 438
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.47 E-value=0.00094 Score=65.49 Aligned_cols=154 Identities=11% Similarity=0.096 Sum_probs=83.8
Q ss_pred hhHHHhhcCCCc-----CCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCc--cceEeee-
Q 008012 284 LDLERATDGFNE-----CNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRN--LIKILSS- 355 (581)
Q Consensus 284 ~~~~~~~~~y~~-----~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~--iv~~~~~- 355 (581)
.++.....+|.. .+.|+.|....+|++...+| .+++|+..... ....+..|+.+++.+.... +.+++..
T Consensus 10 ~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~ 86 (322)
T 2ppq_A 10 DELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRK 86 (322)
T ss_dssp HHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBT
T ss_pred HHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCC
Confidence 344444444544 34566788889999987655 68899887631 1134556777777763111 2333321
Q ss_pred -----eecCCeeeEEEeccCCCCHHH--------------HHhhC--C--CC----CC---HHHHHH------------H
Q 008012 356 -----CCNTNFKALVLEFMPNGSLDK--------------WLYSH--N--YF----QD---IPDRLN------------I 393 (581)
Q Consensus 356 -----~~~~~~~~lv~e~~~~~~L~~--------------~l~~~--~--~~----~~---~~~~~~------------i 393 (581)
....+..+++|+|++|..+.. .++.. . .. .. |..... +
T Consensus 87 ~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l 166 (322)
T 2ppq_A 87 DGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGL 166 (322)
T ss_dssp TCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTH
T ss_pred CCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhh
Confidence 122456789999998865310 01110 0 00 01 111000 0
Q ss_pred HHHHHHHHHHHhcC----CCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 394 MIDVALALEYLHHG----HSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 394 ~~~i~~~L~~LH~~----~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
...+...++++++. ...+++|+|+++.||++++++.+.++||+.+..
T Consensus 167 ~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 167 REEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 01133445555421 235799999999999999876668999997763
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.44 E-value=0.00017 Score=73.92 Aligned_cols=73 Identities=12% Similarity=0.147 Sum_probs=49.3
Q ss_pred CCeecccccccEEEEEeCC--------CcEEEEEEeccchHHHHHHHHHHHHHHHhcC-CCccceEeeeeecCCeeeEEE
Q 008012 296 CNLLGSGGFGSVYKGILSD--------GTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 296 ~~~lg~G~~~~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 366 (581)
++.|+.|....+|++...+ ++.+++|+...... ...+.+|..+++.+. +.-..++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 3578888889999998653 57899999854211 123447888888884 3223566766542 3899
Q ss_pred eccCCCCH
Q 008012 367 EFMPNGSL 374 (581)
Q Consensus 367 e~~~~~~L 374 (581)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987443
No 440
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.36 E-value=0.0011 Score=65.16 Aligned_cols=140 Identities=11% Similarity=0.068 Sum_probs=80.4
Q ss_pred CeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCC--CccceEeee-----eecCCeeeEEEecc
Q 008012 297 NLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRH--RNLIKILSS-----CCNTNFKALVLEFM 369 (581)
Q Consensus 297 ~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~~iv~~~~~-----~~~~~~~~lv~e~~ 369 (581)
..++ |....||++...+|+.+++|+...... ....+..|..+++.+.. -.+.+++.. ....+..+++|+|+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 4566 888899998877777899999874311 12355668888777731 123444433 12245668899999
Q ss_pred CCCCHH-----H------H---Hhh----CC----CCCCHHHH----------------------HHHHHHHHHHHHHHh
Q 008012 370 PNGSLD-----K------W---LYS----HN----YFQDIPDR----------------------LNIMIDVALALEYLH 405 (581)
Q Consensus 370 ~~~~L~-----~------~---l~~----~~----~~~~~~~~----------------------~~i~~~i~~~L~~LH 405 (581)
+|..+. . . ++. .. ...++... ...+..++..+..+-
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 875432 1 1 110 00 01121111 111112222222221
Q ss_pred c-CCCCCceecCCCCCCeEecCCCcEEEeeccCcee
Q 008012 406 H-GHSTPVVHCDLKPSNILLDENMVAHVSDFGISKL 440 (581)
Q Consensus 406 ~-~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~ 440 (581)
. .....++|||+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1 1246689999999999998 4 899999987764
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.25 E-value=0.00038 Score=71.69 Aligned_cols=74 Identities=16% Similarity=0.169 Sum_probs=48.0
Q ss_pred CCeecccccccEEEEEeCC-CcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCcc-ceEeeeeecCCeeeEEEeccCCCC
Q 008012 296 CNLLGSGGFGSVYKGILSD-GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNL-IKILSSCCNTNFKALVLEFMPNGS 373 (581)
Q Consensus 296 ~~~lg~G~~~~v~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~i-v~~~~~~~~~~~~~lv~e~~~~~~ 373 (581)
++.|+.|-...+|++...+ +..+++|+....... .-...+|..+++.+...++ .++++.+. + .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 3578888889999998764 478999987543211 0112478999999854444 56777663 2 35999998754
Q ss_pred H
Q 008012 374 L 374 (581)
Q Consensus 374 L 374 (581)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.21 E-value=0.0019 Score=63.83 Aligned_cols=71 Identities=13% Similarity=0.143 Sum_probs=45.1
Q ss_pred Ceeccc--ccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcC---CCccceEeee------eecCCeeeEE
Q 008012 297 NLLGSG--GFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVR---HRNLIKILSS------CCNTNFKALV 365 (581)
Q Consensus 297 ~~lg~G--~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~~iv~~~~~------~~~~~~~~lv 365 (581)
+.+..| ....||++...+| .+++|+...... ..|+.+++.+. -|.+.+.+.. ....+..+++
T Consensus 27 ~~l~~G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l 99 (339)
T 3i1a_A 27 QFIQGGADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIA 99 (339)
T ss_dssp EEETTTSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEE
T ss_pred EEeeccCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEE
Confidence 445333 3678999987766 899998765431 34566665552 2324444432 2335678999
Q ss_pred EeccCCCCH
Q 008012 366 LEFMPNGSL 374 (581)
Q Consensus 366 ~e~~~~~~L 374 (581)
|+|++|..+
T Consensus 100 ~~~i~G~~~ 108 (339)
T 3i1a_A 100 YPFIHAPNG 108 (339)
T ss_dssp EECCCCCBT
T ss_pred EeccCCCcC
Confidence 999998765
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.17 E-value=0.00071 Score=56.45 Aligned_cols=36 Identities=19% Similarity=0.121 Sum_probs=18.2
Q ss_pred CCcEEecccCcCCCCCCccccCCccCcEEeCCCCcC
Q 008012 78 YILYVNLSSNYLTGSLTSDIQNMKVLIDLDLSRNQL 113 (581)
Q Consensus 78 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 113 (581)
+|++|+|++|+|+...+..|..+++|++|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 355555555555544444445555555555555544
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.06 E-value=0.00048 Score=69.14 Aligned_cols=74 Identities=18% Similarity=0.262 Sum_probs=44.8
Q ss_pred CCeecccccccEEEEEeCC---------CcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCc-cceEeeeeecCCeeeEE
Q 008012 296 CNLLGSGGFGSVYKGILSD---------GTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRN-LIKILSSCCNTNFKALV 365 (581)
Q Consensus 296 ~~~lg~G~~~~v~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~-iv~~~~~~~~~~~~~lv 365 (581)
.+.++.|....+|++...+ ++.+++|+....... ......|.++++.+...+ +.++++.. . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 3567888889999998653 268999987653221 112356888888874223 44666544 2 3689
Q ss_pred EeccCCCCH
Q 008012 366 LEFMPNGSL 374 (581)
Q Consensus 366 ~e~~~~~~L 374 (581)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.90 E-value=0.0024 Score=64.17 Aligned_cols=140 Identities=19% Similarity=0.207 Sum_probs=82.7
Q ss_pred CeecccccccEEEEEeCC--------CcEEEEEEeccchHH------------------HHHHHHHHHHHHHhcC-CCcc
Q 008012 297 NLLGSGGFGSVYKGILSD--------GTTVAIKIFNLQLEQ------------------AFRSFNSECEVLRNVR-HRNL 349 (581)
Q Consensus 297 ~~lg~G~~~~v~~~~~~~--------~~~vavK~~~~~~~~------------------~~~~~~~e~~~l~~l~-h~~i 349 (581)
+.|..|-...+|++...+ ++.|++++.-...+. ..+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 567778888999998653 368999987443211 0112335888888883 4445
Q ss_pred ceEeeeeecCCeeeEEEeccCCCCHHH--------------HHh---hCC----CCCC--HHHHHHHHHHHH--------
Q 008012 350 IKILSSCCNTNFKALVLEFMPNGSLDK--------------WLY---SHN----YFQD--IPDRLNIMIDVA-------- 398 (581)
Q Consensus 350 v~~~~~~~~~~~~~lv~e~~~~~~L~~--------------~l~---~~~----~~~~--~~~~~~i~~~i~-------- 398 (581)
.++++++.. .+|+||++|.+|.. .+. ... .... +..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567777643 28999998754421 111 111 1111 223333433321
Q ss_pred --------------HHHH----HHhc-CCCCCceecCCCCCCeEecCC------CcEEEeeccCcee
Q 008012 399 --------------LALE----YLHH-GHSTPVVHCDLKPSNILLDEN------MVAHVSDFGISKL 440 (581)
Q Consensus 399 --------------~~L~----~LH~-~~~~~i~H~dikp~Nill~~~------~~~kl~Dfg~a~~ 440 (581)
.-+. +|.. .....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1121 2221 124568999999999999876 7899999988763
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.35 E-value=0.0035 Score=63.61 Aligned_cols=74 Identities=15% Similarity=0.217 Sum_probs=48.5
Q ss_pred CCeecccccccEEEEEeCC--------CcEEEEEEeccchHHHHHHHHHHHHHHHhcC-CCccceEeeeeecCCeeeEEE
Q 008012 296 CNLLGSGGFGSVYKGILSD--------GTTVAIKIFNLQLEQAFRSFNSECEVLRNVR-HRNLIKILSSCCNTNFKALVL 366 (581)
Q Consensus 296 ~~~lg~G~~~~v~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 366 (581)
++.+..|-...+|++...+ ++.+++|+...... ..-...+|..+++.+. +.-..++++.+. -++||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 3567788889999998653 58899998754321 1112356888888873 322445555432 27899
Q ss_pred eccCCCCH
Q 008012 367 EFMPNGSL 374 (581)
Q Consensus 367 e~~~~~~L 374 (581)
||++|.++
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.41 E-value=0.04 Score=55.62 Aligned_cols=30 Identities=33% Similarity=0.391 Sum_probs=25.3
Q ss_pred CceecCCCCCCeEe------cCCCcEEEeeccCcee
Q 008012 411 PVVHCDLKPSNILL------DENMVAHVSDFGISKL 440 (581)
Q Consensus 411 ~i~H~dikp~Nill------~~~~~~kl~Dfg~a~~ 440 (581)
.++|+|+.+.||++ +++..+.++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567899999998864
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=91.20 E-value=0.11 Score=33.04 Aligned_cols=27 Identities=26% Similarity=0.544 Sum_probs=15.6
Q ss_pred eeeccchhhHHHHHHHHHHHHHHhccCC
Q 008012 237 KYIFPPIICVVLIALVFIFFLRRRNRST 264 (581)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 264 (581)
.++++ +++++++++++++|.|||+.+.
T Consensus 16 ~~vVG-vll~vi~~l~~~~~~RRR~~~~ 42 (44)
T 2jwa_A 16 SAVVG-ILLVVVLGVVFGILIKRRQQKI 42 (44)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHH-HHHHHHHHHHHHhheehhhhhc
Confidence 34444 5566666666666666666543
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.66 E-value=0.12 Score=33.00 Aligned_cols=26 Identities=23% Similarity=0.441 Sum_probs=13.2
Q ss_pred eeeccchhhHHHHHHHHHHHHHHhcc
Q 008012 237 KYIFPPIICVVLIALVFIFFLRRRNR 262 (581)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~rr~~ 262 (581)
..+++.++++++++.++++++|||+.
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred eehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 34444445555555555555555544
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=88.72 E-value=0.16 Score=32.46 Aligned_cols=29 Identities=17% Similarity=0.433 Sum_probs=15.5
Q ss_pred eeeeccchhhHHHHHHHHHHHHHHhccCC
Q 008012 236 LKYIFPPIICVVLIALVFIFFLRRRNRST 264 (581)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 264 (581)
...+++.++++++++.++++++|||+++.
T Consensus 13 A~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 13 AAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred EEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 34444445555555555556666655543
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=85.51 E-value=1.5 Score=39.19 Aligned_cols=120 Identities=15% Similarity=0.206 Sum_probs=80.3
Q ss_pred CCCccceEeeeeecCCeeeEEEeccCCC-CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCceecCCCCCCeE
Q 008012 345 RHRNLIKILSSCCNTNFKALVLEFMPNG-SLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHSTPVVHCDLKPSNIL 423 (581)
Q Consensus 345 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~-~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~~~i~H~dikp~Nil 423 (581)
.||+.++. .+-.+.+.+.+.++.-+.+ +... +.+ .+...+++++.+|+....+++ .-+|--++|+|++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik~----~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IKS----FTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GGG----SCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HHh----cCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEE
Confidence 68888866 4556666655555544322 2222 322 477899999999998886655 2578889999999
Q ss_pred ecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCccccc
Q 008012 424 LDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDEMFTG 499 (581)
Q Consensus 424 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~~~~~ 499 (581)
++.++.+++.-.|+-..+ +|. ..+...=.-.+=|++..+++++..|+....+
T Consensus 112 f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp ECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred EcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 999999999877754322 222 1222233446778899999999988764443
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.95 E-value=4.4 Score=36.36 Aligned_cols=116 Identities=9% Similarity=0.044 Sum_probs=77.0
Q ss_pred CCCccceEeeeeecCCeeeEEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCCCceecCCCCCCeE
Q 008012 345 RHRNLIKILSSCCNTNFKALVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALE-YLHHGHSTPVVHCDLKPSNIL 423 (581)
Q Consensus 345 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~-~LH~~~~~~i~H~dikp~Nil 423 (581)
.||++ -...-.+.+.+.+.++.-+++.=...+.+ .+...+++++.+|+.... +++ .-+|--++|+|++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~----~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK----TTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT----SCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh----cCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 67887 34444667777776666544433334432 477889999988887766 444 4678889999999
Q ss_pred ecCCCcEEEeeccCceecCCCCCcceeeccccCccccCCCCCCCCCCCccccHHHHHHHHHHHHhCCCCCCc
Q 008012 424 LDENMVAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEFGSEGNVSSKCDVYSYGILLLETFTRKKPTDE 495 (581)
Q Consensus 424 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~vl~el~tg~~Pf~~ 495 (581)
++.++.+++.-.|.-.. ++|.- .+..-=.-++=|++..++.++..|+.
T Consensus 117 f~~~~~p~i~hRGi~~~-------------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 117 FNRALEPFFLHVGVKES-------------------LPPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp ECTTCCEEESCCEETTT-------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EeCCCcEEEEEcCCccc-------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999987775332 22321 12222234667888889998887654
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=74.08 E-value=7.8 Score=29.88 Aligned_cols=45 Identities=16% Similarity=0.136 Sum_probs=20.1
Q ss_pred ccccCCccccCCCCCCEEEccCCcccCCCCcccccCCCCcEEeccc
Q 008012 41 LNGSIPTCLASLTSLRELRLNSNKLTSSIPSALWALEYILYVNLSS 86 (581)
Q Consensus 41 i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 86 (581)
++.+...+|.++++|+.+.|..+ ++..-..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344444444555555544432 3323344444455555544433
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=73.87 E-value=6.3 Score=30.41 Aligned_cols=46 Identities=15% Similarity=0.118 Sum_probs=24.0
Q ss_pred cccccCCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEEccC
Q 008012 16 HLQGSIPYDLCQLKRLNSLSLQGNKLNGSIPTCLASLTSLRELRLNS 62 (581)
Q Consensus 16 ~l~~~~~~~~~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~ 62 (581)
.++.+-...|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 444444455555555555555543 3334455555555555555543
No 455
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=72.43 E-value=0.5 Score=48.41 Aligned_cols=60 Identities=12% Similarity=0.024 Sum_probs=17.4
Q ss_pred CcCCeecccccccEEEEEeCC-CcEEEE------EEeccch--HHHHHHHHHHHHHHHhcCCCccceEeeee
Q 008012 294 NECNLLGSGGFGSVYKGILSD-GTTVAI------KIFNLQL--EQAFRSFNSECEVLRNVRHRNLIKILSSC 356 (581)
Q Consensus 294 ~~~~~lg~G~~~~v~~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 356 (581)
.+.+.+| ||.||+|.+.. ..+||+ |..+... .+....+.+|..+++.++|||+++.+++.
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 4456676 99999999763 467888 6655432 23345678899999999999999988764
No 456
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=67.92 E-value=85 Score=33.45 Aligned_cols=44 Identities=25% Similarity=0.192 Sum_probs=31.8
Q ss_pred HHHHHHHHHH--HHHHHHhcCCCCCceecCCCCCCeEecCCCcEEEeeccCce
Q 008012 389 DRLNIMIDVA--LALEYLHHGHSTPVVHCDLKPSNILLDENMVAHVSDFGISK 439 (581)
Q Consensus 389 ~~~~i~~~i~--~~L~~LH~~~~~~i~H~dikp~Nill~~~~~~kl~Dfg~a~ 439 (581)
.+..++.++| +.+.|+= . =+|=+++|||++.+|.+.=+|||.+-
T Consensus 530 ar~nF~~SlA~~Svv~YIL---G----lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 530 VMDTYIKSCAGYCVITYLL---G----VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHH---T----CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHc---c----CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 4455555554 3345543 1 26889999999999999999999874
No 457
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=67.28 E-value=0.84 Score=28.16 Aligned_cols=23 Identities=26% Similarity=0.434 Sum_probs=11.5
Q ss_pred eeeccchhhHHHHHHHHHHHHHH
Q 008012 237 KYIFPPIICVVLIALVFIFFLRR 259 (581)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~r 259 (581)
.+++++++.+++++.++++++||
T Consensus 15 GiVvG~v~gv~li~~l~~~~~rr 37 (38)
T 2k1k_A 15 AVIFGLLLGAALLLGILVFRSRR 37 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCC
T ss_pred eeehHHHHHHHHHHHHHHHHeec
Confidence 34444555555555555555443
No 458
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=49.65 E-value=2.5e+02 Score=29.36 Aligned_cols=82 Identities=13% Similarity=0.099 Sum_probs=49.9
Q ss_pred ceEeeeeecCCeeeEEEeccCCCCHHHHHh----------hCCCC------CCHHHHHHHHHHHH--HHHHHHhcCCCCC
Q 008012 350 IKILSSCCNTNFKALVLEFMPNGSLDKWLY----------SHNYF------QDIPDRLNIMIDVA--LALEYLHHGHSTP 411 (581)
Q Consensus 350 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~----------~~~~~------~~~~~~~~i~~~i~--~~L~~LH~~~~~~ 411 (581)
+..|.+...+....+ .|++++.++.+.+. +.... ..+..+..++..+| +.+.|+= .
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL---G-- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL---G-- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH---T--
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee---e--
Confidence 445555555544443 57777655555443 22111 12344555665554 3455654 2
Q ss_pred ceecCCCCCCeEecCCCcEEEeeccCce
Q 008012 412 VVHCDLKPSNILLDENMVAHVSDFGISK 439 (581)
Q Consensus 412 i~H~dikp~Nill~~~~~~kl~Dfg~a~ 439 (581)
=+|=+++|||++.+|++.=+|||.+-
T Consensus 476 --igDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 --VGDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp --CCCCCTTSEEECTTSCEEECCCSSCT
T ss_pred --ccCCCCcceeEcCCCCEeeeehHHhh
Confidence 25778999999999999999999874
No 459
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=49.13 E-value=1.1 Score=26.80 Aligned_cols=18 Identities=17% Similarity=0.569 Sum_probs=9.9
Q ss_pred hhhHHHHHHHHHHHHHHh
Q 008012 243 IICVVLIALVFIFFLRRR 260 (581)
Q Consensus 243 ~~~~~~~~~~~~~~~~rr 260 (581)
++++++++..+.++.|||
T Consensus 17 lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 17 VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHTTTTTHHHHHC
T ss_pred HHHHHHHHHHhheEEeec
Confidence 455555555555566655
No 460
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=43.61 E-value=61 Score=30.97 Aligned_cols=137 Identities=14% Similarity=0.081 Sum_probs=72.7
Q ss_pred cCCeecccccccEEEEEeCCCcEEEEEEeccchHHHHHHHHHHHHHHHhcCCCccceEeee-------------ee----
Q 008012 295 ECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQLEQAFRSFNSECEVLRNVRHRNLIKILSS-------------CC---- 357 (581)
Q Consensus 295 ~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~-------------~~---- 357 (581)
.++....| .+.||.+.. ++..++||-.. .-..+.+..++...-.+..|+..-+.-. ..
T Consensus 73 ~I~~s~~G-stgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~ 147 (342)
T 1cja_A 73 GIERSEKG-TEGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFR 147 (342)
T ss_dssp EEEECCST-TSCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSC
T ss_pred EEEeccCC-CCCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhH
Confidence 33444455 456666665 47899999552 2234556666666666677764333211 00
Q ss_pred -----cCCeeeEEEeccCCCCHHHHHhhC-CCCCCHHHHHHHHHHH--HHHHHHHhcCCCCC-ce-ecCCCCCCeEecCC
Q 008012 358 -----NTNFKALVLEFMPNGSLDKWLYSH-NYFQDIPDRLNIMIDV--ALALEYLHHGHSTP-VV-HCDLKPSNILLDEN 427 (581)
Q Consensus 358 -----~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i--~~~L~~LH~~~~~~-i~-H~dikp~Nill~~~ 427 (581)
......++|+|.+|..|.+.-... ...+.. +.+.++ +-++..+.+..++- .+ +..-.++|||++++
T Consensus 148 ~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 148 VITTLANQANILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HHHHhhcccceehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 012456999999876654321110 000121 223333 23344444322222 21 22358999999865
Q ss_pred C-cEEEeeccCcee
Q 008012 428 M-VAHVSDFGISKL 440 (581)
Q Consensus 428 ~-~~kl~Dfg~a~~ 440 (581)
+ .+.++|-+.+..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 4 488999988864
No 461
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=26.71 E-value=23 Score=23.61 Aligned_cols=13 Identities=8% Similarity=0.148 Sum_probs=4.9
Q ss_pred eeccchhhHHHHH
Q 008012 238 YIFPPIICVVLIA 250 (581)
Q Consensus 238 ~~~~~~~~~~~~~ 250 (581)
++.++++++++++
T Consensus 15 Ii~svl~GLllL~ 27 (54)
T 2knc_A 15 VLVGVLGGLLLLT 27 (54)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3333333333333
No 462
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=25.37 E-value=18 Score=24.05 Aligned_cols=15 Identities=13% Similarity=0.335 Sum_probs=6.1
Q ss_pred eeeccchhhHHHHHH
Q 008012 237 KYIFPPIICVVLIAL 251 (581)
Q Consensus 237 ~~~~~~~~~~~~~~~ 251 (581)
+++++++++++++++
T Consensus 11 iIi~svl~GLLLL~L 25 (54)
T 2l8s_A 11 VILLSAFAGLLLLML 25 (54)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333444444444443
No 463
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=22.97 E-value=21 Score=22.14 Aligned_cols=8 Identities=38% Similarity=0.530 Sum_probs=3.1
Q ss_pred hhhHHHHH
Q 008012 243 IICVVLIA 250 (581)
Q Consensus 243 ~~~~~~~~ 250 (581)
++++++++
T Consensus 20 v~Gv~ll~ 27 (41)
T 2k9y_A 20 AVGVVLLL 27 (41)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHH
Confidence 33333333
No 464
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=20.58 E-value=46 Score=22.99 Aligned_cols=26 Identities=19% Similarity=0.387 Sum_probs=11.3
Q ss_pred eccchhhHHHHHHH-HHHHHHHhccCC
Q 008012 239 IFPPIICVVLIALV-FIFFLRRRNRST 264 (581)
Q Consensus 239 ~~~~~~~~~~~~~~-~~~~~~rr~~~~ 264 (581)
+.++++++++.+.+ +++..+++.|.+
T Consensus 13 vlGg~~~lll~~glcI~ccvkcrhRrr 39 (70)
T 2klu_A 13 VLGGVAGLLLFIGLGIFFSVRSRHRRR 39 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCCSS
T ss_pred HHhHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 33444444444444 443554444433
No 465
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=20.33 E-value=3e+02 Score=28.13 Aligned_cols=144 Identities=14% Similarity=0.123 Sum_probs=96.2
Q ss_pred HHHhhcCCCcCCeecccccccEEEEEeCCCcEEEEEEeccch----HHHHHHHHHHHHHHHhcCCCccceEeeee-----
Q 008012 286 LERATDGFNECNLLGSGGFGSVYKGILSDGTTVAIKIFNLQL----EQAFRSFNSECEVLRNVRHRNLIKILSSC----- 356 (581)
Q Consensus 286 ~~~~~~~y~~~~~lg~G~~~~v~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~----- 356 (581)
+....++| .+.-|--|.|-.+..-.+-.++.|+++..- +-..+.++.-.++.+ +|..+-++-+..
T Consensus 305 l~~s~D~F----i~APGikGmVM~VFTLPSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Efsn~ 378 (578)
T 3eps_A 305 LQGCNEQF----IEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEFENF 378 (578)
T ss_dssp HHTCCCCB----EECSSCCCSSEEEEECTTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEEEEE
T ss_pred hccCchhE----EECCCCCceEEEEEcCCCCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhhhcc
Confidence 34444544 578899999999985557889999997541 111223333333333 344444333221
Q ss_pred ------------------------ecCCeee---EEEeccCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 008012 357 ------------------------CNTNFKA---LVLEFMPNGSLDKWLYSHNYFQDIPDRLNIMIDVALALEYLHHGHS 409 (581)
Q Consensus 357 ------------------------~~~~~~~---lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~L~~LH~~~~ 409 (581)
.+++.+. +-+|.- -..|.-|+++. +.+++...+.+--.|++.|- .
T Consensus 379 ~fp~~Rfs~eLL~EL~~~~ps~le~~gd~liIkHlYiERR-MtPLNLYL~~a----~~~~~~~av~eYG~AIKqLA---a 450 (578)
T 3eps_A 379 VLEKRHISPALMELLLQEAAEKITDLGEQIVIRHLYIERR-MVPLNIWLEQV----EGQQLRDAIEEYGNAIRQLA---A 450 (578)
T ss_dssp EEEGGGBCHHHHHHHHHHSGGGEEEETTEEEEEEEEEEEC-CEEHHHHHHHC----CTHHHHHHHHHHHHHHHHHH---H
T ss_pred cCchhhCCHHHHHHHHHhCCccEEEcCCeeEeeeeeeecc-ccchhHHHhhC----CHHHHHHHHHHHHHHHHHHH---H
Confidence 1123221 233332 34677777765 44677888899999999999 8
Q ss_pred CCceecCCCCCCeEecCCCcEEEeeccCceecCC
Q 008012 410 TPVVHCDLKPSNILLDENMVAHVSDFGISKLLGE 443 (581)
Q Consensus 410 ~~i~H~dikp~Nill~~~~~~kl~Dfg~a~~~~~ 443 (581)
.+|.-||.=-.|+=|+..|+|..-|+.-.+.+.+
T Consensus 451 ANIFPGDML~KNFGVTRhgRVVFYDYDEI~ylTd 484 (578)
T 3eps_A 451 ANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTE 484 (578)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCGGGCEESTT
T ss_pred hcCCCcccccccCCccccceEEEecccceeeecc
Confidence 9999999999999999999999999998877643
Done!